BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025483
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 126/202 (62%), Gaps = 9/202 (4%)
Query: 1 MPKGSLENHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILL 56
M GS+ + L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA+NILL
Sbjct: 117 MANGSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D EF A + DFGLAK D HV V GT G+ APEY++TG+ + K+DV+ +GV+LL
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL 234
Query: 117 ELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
EL++G+ A D ++ + L+DW K L +K KL ++D L G Y + +A
Sbjct: 235 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVA 293
Query: 175 LQCLNNEPKLRPRMSEVLAILE 196
L C + P RP+MSEV+ +LE
Sbjct: 294 LLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 131/221 (59%), Gaps = 9/221 (4%)
Query: 1 MPKGSLENHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILL 56
M GS+ + L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA+NILL
Sbjct: 109 MANGSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D EF A + DFGLAK D HV V G G+ APEY++TG+ + K+DV+ +GV+LL
Sbjct: 168 DEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLL 226
Query: 117 ELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
EL++G+ A D ++ + L+DW K L +K KL ++D L G Y + +A
Sbjct: 227 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVA 285
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQ 215
L C + P RP+MSEV+ +LE + + + E RQ
Sbjct: 286 LLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 5/198 (2%)
Query: 1 MPKGSLENHLFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G+L+ HL+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDE 174
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
F K++DFG++K G D+TH+ V GT GY PEY GRLT KSDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 119 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 178
L R A+ ++ +L +WA + +L +I+D L + ++ A++CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 179 NNEPKLRPRMSEVLAILE 196
+ RP M +VL LE
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 5/198 (2%)
Query: 1 MPKGSLENHLFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G+L+ HL+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDE 174
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
F K++DFG++K G +TH+ V GT GY PEY GRLT KSDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 119 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 178
L R A+ ++ +L +WA + +L +I+D L + ++ A++CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 179 NNEPKLRPRMSEVLAILE 196
+ RP M +VL LE
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 122/201 (60%), Gaps = 7/201 (3%)
Query: 1 MPKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
MP GSL + L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEA 169
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
F AK+SDFGLA+A +T + ++++GT Y APE + G +T KSD+YSFGVVLLE++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+G AVD+ + Q L+D + +++ + +D K+ + ++A QCL+
Sbjct: 229 TGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLH 285
Query: 180 NEPKLRPRMSEVLAILERLEA 200
+ RP + +V +L+ + A
Sbjct: 286 EKKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 121/201 (60%), Gaps = 7/201 (3%)
Query: 1 MPKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
MP GSL + L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEA 169
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
F AK+SDFGLA+A +T + +++GT Y APE + G +T KSD+YSFGVVLLE++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+G AVD+ + Q L+D + +++ + +D K+ + ++A QCL+
Sbjct: 229 TGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLH 285
Query: 180 NEPKLRPRMSEVLAILERLEA 200
+ RP + +V +L+ + A
Sbjct: 286 EKKNKRPDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 7/201 (3%)
Query: 1 MPKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
MP GSL + L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD
Sbjct: 106 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEA 163
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
F AK+SDFGLA+A + + +++GT Y APE + G +T KSD+YSFGVVLLE++
Sbjct: 164 FTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 222
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+G AVD+ + Q L+D + +++ + +D K+ + ++A QCL+
Sbjct: 223 TGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLH 279
Query: 180 NEPKLRPRMSEVLAILERLEA 200
+ RP + +V +L+ + A
Sbjct: 280 EKKNKRPDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 2 PKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
P GSL + L G PLSW R K+A GAA G+ FLH E+ I+RD K++NILLD F
Sbjct: 104 PNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAF 161
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
AK+SDFGLA+A + ++++GT Y APE + G +T KSD+YSFGVVLLE+++
Sbjct: 162 TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIIT 220
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 180
G AVD+ + Q L+D + +++ + +D K + ++A QCL+
Sbjct: 221 GLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHE 277
Query: 181 EPKLRPRMSEVLAILERLEA 200
+ RP + +V +L+ A
Sbjct: 278 KKNKRPDIKKVQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 1 MPKGSLENHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
+ +GSL L + G + L R+ +A AKG+ +LH+ +++RD K+ N+L+D +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK 175
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
+ K+ DFGL++ S GT + APE + KSDVYSFGV+L EL
Sbjct: 176 YTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL- 232
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+ + + + V A + + ++ R ++ PQ AA C
Sbjct: 233 ---ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CWT 277
Query: 180 NEPKLRPRMSEVLAILERL 198
NEP RP + ++ +L L
Sbjct: 278 NEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 1 MPKGSLENHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
+ +GSL L + G + L R+ +A AKG+ +LH+ +++R+ K+ N+L+D +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK 175
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K+ DFGL++ + T +S++ GT + APE + KSDVYSFGV+L EL
Sbjct: 176 YTVKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
Query: 119 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 178
+ + + + V A + + ++ R ++ PQ AA C
Sbjct: 233 ----ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CW 276
Query: 179 NNEPKLRPRMSEVLAILERL 198
NEP RP + ++ +L L
Sbjct: 277 TNEPWKRPSFATIMDLLRPL 296
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---- 56
+P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 103 VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 57 -DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGV 113
+A AK++DFGL++ H + ++G + APE + T K+D YSF +
Sbjct: 162 ENAPVCAKVADFGLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAAT 172
+L +L+G D+ G K K ++ + L P+
Sbjct: 217 ILYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 173 LALQCLNNEPKLRPRMSEVLAILERL 198
+ C + +PK RP S ++ L L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 1 MPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M KGSL + L QPL + I A+G+ F+ + I+RD +A+NIL+ A
Sbjct: 91 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSA 146
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K++DFGLA+ + T + APE + G T KSDV+SFG++L+E+
Sbjct: 147 SLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 119 LS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 177
++ GR P +S+ ++ R ++ P+ + ++C
Sbjct: 206 VTYGRIPY----------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRC 248
Query: 178 LNNEPKLRPRMSEVLAILERLE 199
N P+ RP + ++L+ E
Sbjct: 249 WKNRPEERPTFEYIQSVLDDFE 270
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 135 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 135 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 140 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 141 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 132 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 133 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 137 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 133 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 135 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 137 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 143 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 135 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 135 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 119 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 173
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 174 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 233
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 234 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 277
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 278 CWHPKAEMRPSFSELVS 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 112 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 166
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 167 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 227 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 270
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 271 CWHPKAEMRPSFSELVS 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 114 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 168
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 229 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 272
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+L++ + K+ DFGLA+ A P D T T+ + T
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 115 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 169
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 170 KFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 230 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 273
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 274 CWHPKAEMRPSFSELVS 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 115 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 169
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 170 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 230 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 273
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 274 CWHPKAEMRPSFSELVS 290
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T
Sbjct: 137 RGLKYIHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 114 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 168
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 229 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 272
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L+ H++ G A + A GL LH +++YRD K NILLD
Sbjct: 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHG 323
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ ++SD GLA P G +GT GY APE V R T D ++ G +L E+++
Sbjct: 324 HIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 121 GRCAVDKTKVGIEQSLVD 138
G+ + K I++ V+
Sbjct: 381 GQSPFQQRKKKIKREEVE 398
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L+ H++ G A + A GL LH +++YRD K NILLD
Sbjct: 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHG 323
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ ++SD GLA P G +GT GY APE V R T D ++ G +L E+++
Sbjct: 324 HIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 121 GRCAVDKTKVGIEQSLVD 138
G+ + K I++ V+
Sbjct: 381 GQSPFQQRKKKIKREEVE 398
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ FL A + ++RD A N +LD
Sbjct: 173 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDE 227
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ D H T + A E + T + TTKSDV+SFGV+L
Sbjct: 228 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 288 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 331
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 332 CWHPKAEMRPSFSELVS 348
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---- 56
+P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 103 VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 57 -DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGV 113
+A AK++DFG ++ H + ++G + APE + T K+D YSF +
Sbjct: 162 ENAPVCAKVADFGTSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAAT 172
+L +L+G D+ G K K ++ + L P+
Sbjct: 217 ILYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 173 LALQCLNNEPKLRPRMSEVLAILERL 198
+ C + +PK RP S ++ L L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ + A+G+ +L AE + ++RD A N +LD F K++DFGLA+ DR + S
Sbjct: 127 ISFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARD--ILDREYYSV 182
Query: 84 QVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
Q H + A E + T R TTKSDV+SFGV+L ELL+
Sbjct: 183 Q-QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
GL FLH ++YRD K NILLD + + K++DFG+ K GD + + GT Y
Sbjct: 131 GLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYI 186
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE + + D +SFGV+L E+L G+
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILLDAEFN--------AKLSDFG 68
++WAV++ A+G+ +LHD A +I+RD K+SNIL+ + K++DFG
Sbjct: 108 VNWAVQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 69 LAKAGPTGDRTHVSTQV--MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC--- 123
LA+ H +T++ G + + APE + + SDV+S+GV+L ELL+G
Sbjct: 162 LAR------EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
Query: 124 AVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK 183
+D V + + KL P A L C N +P
Sbjct: 216 GIDGLAVA-------------------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPH 256
Query: 184 LRPRMSEVL 192
RP + +L
Sbjct: 257 SRPSFTNIL 265
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 1 MPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M KGSL + L QPL + I A+G+ F+ + I+RD +A+NIL+ A
Sbjct: 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSA 319
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K++DFGLA+ + T + APE + G T KSDV+SFG++L+E+
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 119 LS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 177
++ GR P +S+ ++ R ++ P+ + ++C
Sbjct: 379 VTYGRIPY----------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRC 421
Query: 178 LNNEPKLRPRMSEVLAILE 196
N P+ RP + ++L+
Sbjct: 422 WKNRPEERPTFEYIQSVLD 440
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 1 MPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M KGSL + L QPL + I A+G+ F+ + I+RD +A+NIL+ A
Sbjct: 258 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSA 313
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K++DFGLA+ G + APE + G T KSDV+SFG++L+E+
Sbjct: 314 SLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIKSDVWSFGILLMEI 362
Query: 119 LS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 177
++ GR P +S+ ++ R ++ P+ + ++C
Sbjct: 363 VTYGRIPY----------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRC 405
Query: 178 LNNEPKLRPRMSEVLAILE 196
N P+ RP + ++L+
Sbjct: 406 WKNRPEERPTFEYIQSVLD 424
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 4 GSLENHLFRRGPQPLSWAVR-MKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFN 61
GSL N L P P A M + ++G+ +LH + + +I+RD K N+LL A
Sbjct: 85 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 144
Query: 62 A-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+ DFG A +TH+ T G+ + APE + K DV+S+G++L E+++
Sbjct: 145 VLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP---QKAAHTAATLALQC 177
R KP+ FRIM G P + +L +C
Sbjct: 200 RR------------------KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRC 241
Query: 178 LNNEPKLRPRMSEVLAILERL 198
+ +P RP M E++ I+ L
Sbjct: 242 WSKDPSQRPSMEEIVKIMTHL 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 134 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 250
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 251 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 297
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---- 56
+P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 103 VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 57 -DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGV 113
+A AK++DF L++ H + ++G + APE + T K+D YSF +
Sbjct: 162 ENAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAAT 172
+L +L+G D+ G K K ++ + L P+
Sbjct: 217 ILYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 173 LALQCLNNEPKLRPRMSEVLAILERL 198
+ C + +PK RP S ++ L L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 135 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 251
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 252 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 298
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 107 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 223
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 224 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 109 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 225
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 226 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 127 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 243
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 244 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 290
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 107 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 223
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 224 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 112 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 228
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 229 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 112 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 228
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 229 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 275
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 135 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 251
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 252 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NIL+ A K+ DFG+A+A +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 4 GSLENHLFRRGPQPLSWAVR-MKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFN 61
GSL N L P P A M + ++G+ +LH + + +I+RD K N+LL A
Sbjct: 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 143
Query: 62 A-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+ DFG A +TH+ T G+ + APE + K DV+S+G++L E+++
Sbjct: 144 VLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP---QKAAHTAATLALQC 177
R KP+ FRIM G P + +L +C
Sbjct: 199 RR------------------KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRC 240
Query: 178 LNNEPKLRPRMSEVLAILERL 198
+ +P RP M E++ I+ L
Sbjct: 241 WSKDPSQRPSMEEIVKIMTHL 261
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 12 RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK 71
+R P P++ +V + L +LH + +IYRD K NILLD + K++DFG AK
Sbjct: 101 QRFPNPVAKFYAAEVCLA----LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAK 154
Query: 72 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
P V+ + GT Y APE V+T D +SFG+++ E+L+G
Sbjct: 155 YVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 107 IDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 84 QVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
Q+ G+ + APE + + +SDVY+FG+VL EL++G+ +Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVG 223
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ YLS +K+ P+ A +CL + RP ++LA +E L
Sbjct: 224 RGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T + + T
Sbjct: 139 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHG 90
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T + + T
Sbjct: 140 RGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 91 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + TKS D++S G +L E+LS R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
GL FLH ++YRD K NILLD + + K++DFG+ K GD + GT Y
Sbjct: 130 GLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYI 185
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE + + D +SFGV+L E+L G+
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 63
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 161
Query: 64 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 162 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 123 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 182
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 219 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSMSVKAASVLKSFLNKDP 269
Query: 183 KLR 185
K R
Sbjct: 270 KER 272
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 63
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 91 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 146
Query: 64 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 147 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
Query: 123 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 182
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 204 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDP 254
Query: 183 KLR 185
K R
Sbjct: 255 KER 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 63
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 138 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 193
Query: 64 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 194 LTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
Query: 123 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 182
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 251 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDP 301
Query: 183 KLR 185
K R
Sbjct: 302 KER 304
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 63
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 95 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 150
Query: 64 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 151 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
Query: 123 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 182
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 208 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDP 258
Query: 183 KLR 185
K R
Sbjct: 259 KER 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 111 IDIARQTARGMDYLH-AKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 84 QVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSGR 122
Q+ G+ + APE + + + +SDVY+FG+VL EL++G+
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NI++ A K+ DFG+A+A +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NI++ A K+ DFG+A+A +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NI++ A K+ DFG+A+A +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NI++ A K+ DFG+A+A +
Sbjct: 112 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KGSL ++L RG L +K ++ + + +L + ++RD A N+L+ +
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDN 326
Query: 61 NAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
AK+SDFGL K A T D + + + APE + + +TKSDV+SFG++L E+
Sbjct: 327 VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 120 S 120
S
Sbjct: 381 S 381
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 123 IDIARQTARGMDYLH-AKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 84 QVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSGR 122
Q+ G+ + APE + + + +SDVY+FG+VL EL++G+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH A+S +I+RD K++NI L + K+ DFGLA +H
Sbjct: 123 IDIARQTARGMDYLH-AKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 84 QVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSGR 122
Q+ G+ + APE + + + +SDVY+FG+VL EL++G+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KGSL ++L RG L +K ++ + + +L + ++RD A N+L+ +
Sbjct: 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDN 139
Query: 61 NAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
AK+SDFGL K A T D + + + APE + + +TKSDV+SFG++L E+
Sbjct: 140 VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIY 193
Query: 120 S 120
S
Sbjct: 194 S 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-GPT 75
P++ ++V A + L F H ++ +I+RD K +NI++ A K+ DFG+A+A +
Sbjct: 129 PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KGSL ++L RG L +K ++ + + +L + ++RD A N+L+ +
Sbjct: 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDN 154
Query: 61 NAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
AK+SDFGL K A T D + + + APE + + +TKSDV+SFG++L E+
Sbjct: 155 VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIY 208
Query: 120 S 120
S
Sbjct: 209 S 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 4 GSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
G L H+ + G PQ + +A + + GL FLH + +IYRD K N++LD+E
Sbjct: 105 GDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFLH--KRGIIYRDLKLDNVMLDSE 156
Query: 60 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
+ K++DFG+ K T + + GT Y APE +A D +++GV+L E+L
Sbjct: 157 GHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 120 SGRCAVD 126
+G+ D
Sbjct: 215 AGQPPFD 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 29 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG-DRTHVSTQVMG 87
G A G+ +L A ++RD A NIL+++ K+SDFGL++ + T+ ++
Sbjct: 155 GIAAGMKYL--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 88 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-D 146
+ APE ++ + T+ SDV+SFG+V+ E+++ +PY
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG-----------------ERPYWELS 255
Query: 147 KRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL-EAPKNSA 205
++ + ++ P L +QC E RP+ +++++IL++L AP +
Sbjct: 256 NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 315
Query: 206 KLSQSEP 212
L+ +P
Sbjct: 316 TLADFDP 322
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L R + A + A +G+ +LH I+RD A N+LLD +
Sbjct: 117 VPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH--AQHYIHRDLAARNVLLDNDR 171
Query: 61 NAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGLAKA P G + V + APE + + SDV+SFGV L ELL
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+ C ++ L+ A+ ++ R L +++ P K L C
Sbjct: 232 T-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPAEVYHLMKNCWE 289
Query: 180 NEPKLRPRMSEVLAILE 196
E RP ++ IL+
Sbjct: 290 TEASFRPTFENLIPILK 306
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 89 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 145
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ + +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 146 EIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 201
Query: 121 GR 122
GR
Sbjct: 202 GR 203
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 121 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 222
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C PK+RP E
Sbjct: 223 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 191 VLAILE 196
++ +L+
Sbjct: 279 IVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 225
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C PK+RP E
Sbjct: 226 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 191 VLAILE 196
++ +L+
Sbjct: 282 IVNLLK 287
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ + H V++RD K N+LLDA NAK++DFGL+ G+ S G+ YA
Sbjct: 128 GVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYA 182
Query: 93 APEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 130
APE V +GRL + D++S GV+L LL G D V
Sbjct: 183 APE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KGSL ++L RG L +K ++ + + +L + ++RD A N+L+ +
Sbjct: 88 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDN 145
Query: 61 NAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
AK+SDFGL K A T D + + + APE + +TKSDV+SFG++L E+
Sbjct: 146 VAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWSFGILLWEIY 199
Query: 120 S 120
S
Sbjct: 200 S 200
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 1 MPKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
M GSL+ L G + V M +GA G+ +L D ++RD A N+L+D+
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSN 187
Query: 60 FNAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+SDFGL++ D + +T + APE +A ++ SDV+SFGVV+ E+
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 119 LSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 177
L+ +PY + R + ++ P H L L C
Sbjct: 248 LAYG-----------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290
Query: 178 LNNEPKLRPRMSEVLAILERL 198
+ + RPR S+++++L+ L
Sbjct: 291 WHKDRAQRPRFSQIVSVLDAL 311
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 113 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 167
Query: 59 EFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ H T + A E + T + TTKSDV+SFGV+L
Sbjct: 168 KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 228 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 271
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 272 CWHPKAEMRPSFSELVS 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 114 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 168
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 229 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 272
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 111 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 165
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 166 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 225
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 226 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 269
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 270 CWHPKAEMRPSFSELVS 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 109 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 163
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 223
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 224 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 267
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 268 CWHPKAEMRPSFSELVS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 133 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 187
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 188 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 247
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 248 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 291
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 292 CWHPKAEMRPSFSELVS 308
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 106 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 160
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 161 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 220
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 221 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 264
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 265 CWHPKAEMRPSFSELVS 281
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 114 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 168
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 229 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 272
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 113 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 167
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 168 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 228 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 271
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 272 CWHPKAEMRPSFSELVS 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 132 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 186
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 187 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 246
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 247 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 290
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 291 CWHPKAEMRPSFSELVS 307
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDA 58
M G L N + P V+ + G AKG+ +L A + ++RD A N +LD
Sbjct: 112 MKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDE 166
Query: 59 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+F K++DFGLA+ + H T + A E + T + TTKSDV+SFGV+L
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
EL++ R A V V YL R+L + P+ + L+
Sbjct: 227 ELMT-RGAPPYPDVNTFDITV-----YLLQGRRLLQ----------PEYCPDPLYEVMLK 270
Query: 177 CLNNEPKLRPRMSEVLA 193
C + + ++RP SE+++
Sbjct: 271 CWHPKAEMRPSFSELVS 287
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 148 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 204
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 205 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 260
Query: 121 GR 122
GR
Sbjct: 261 GR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 113 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 169
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 170 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
Query: 121 GR 122
GR
Sbjct: 226 GR 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 14 GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG 73
GP PLS A ++ +A A G+ +L +E + ++RD N L+ K++DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 74 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIE 133
+ D + PE + R TT+SDV+++GVVL E+ S G++
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS---------YGLQ 275
Query: 134 QSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
PY ++ + ++ + D + P+ L C + P RP +
Sbjct: 276 --------PYYGMAHEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSI 326
Query: 192 LAILERL 198
IL+R+
Sbjct: 327 HRILQRM 333
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 28/152 (18%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
V++RD K N+LLDA NAK++DFGL+ G+ S G+ YAAPE V +GRL
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 104 T--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ 161
+ D++S GV+L LL G D V P L K + GG
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIR---------GGV 227
Query: 162 Y--PQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+ P+ + ATL + L +P R + ++
Sbjct: 228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL+ +L + ++ ++K A+ KG+ +L Q ++RD A N+L+++E
Sbjct: 107 LPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYVHRDLAARNVLVESEH 163
Query: 61 NAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGL KA T + V + APE + + SDV+SFGV L ELL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
Query: 120 SGRCAVDKT 128
+ C D +
Sbjct: 224 T-YCDSDSS 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL+ +L + ++ ++K A+ KG+ +L Q ++RD A N+L+++E
Sbjct: 95 LPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYVHRDLAARNVLVESEH 151
Query: 61 NAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGL KA T + V + APE + + SDV+SFGV L ELL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
Query: 120 SGRCAVDKT 128
+ C D +
Sbjct: 212 T-YCDSDSS 219
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L R + A + A +G+ +LH I+R+ A N+LLD +
Sbjct: 100 VPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHS--QHYIHRNLAARNVLLDNDR 154
Query: 61 NAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGLAKA P G + V + APE + + SDV+SFGV L ELL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+ C ++ L+ A+ ++ R L +++ P K L C
Sbjct: 215 T-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPCEVYHLMKNCWE 272
Query: 180 NEPKLRPRMSEVLAILE 196
E RP ++ IL+
Sbjct: 273 TEASFRPTFENLIPILK 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 225
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C PK+RP E
Sbjct: 226 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 191 VLAILE 196
++ +L+
Sbjct: 282 IVNLLK 287
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 86 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 143 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 121 GR 122
GR
Sbjct: 199 GR 200
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGLA+ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLARV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 86 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 143 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 121 GR 122
GR
Sbjct: 199 GR 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 105 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 161
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 162 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
Query: 121 GR 122
GR
Sbjct: 218 GR 219
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 1 MPKGSLENHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
M GSL+ L G + V M +GA G+ +L D ++RD A N+L+D+
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSN 187
Query: 60 FNAKLSDFGLAKA---GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
K+SDFGL++ P T ++ + APE +A ++ SDV+SFGVV+
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 117 ELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLAL 175
E+L+ +PY + R + ++ P H L L
Sbjct: 246 EVLAYG-----------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLML 288
Query: 176 QCLNNEPKLRPRMSEVLAILERL 198
C + + RPR S+++++L+ L
Sbjct: 289 DCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 123 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 178
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 179 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 224
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C PK+RP E
Sbjct: 225 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLE 280
Query: 191 VLAILE 196
++ +L+
Sbjct: 281 IVNLLK 286
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 86 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 143 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 121 GR 122
GR
Sbjct: 199 GR 200
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 84 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 135
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 114
L+ K++DFGLA+ + T + APE GR T KSDV+SFG++
Sbjct: 136 LVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGIL 194
Query: 115 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATL 173
L EL + K +V PY R++ ++ P + + L
Sbjct: 195 LTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDL 237
Query: 174 ALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
QC EP+ RP + A LE + +EP Q G
Sbjct: 238 MCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 273
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L R + A + A +G+ +LH I+R+ A N+LLD +
Sbjct: 100 VPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH--AQHYIHRNLAARNVLLDNDR 154
Query: 61 NAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGLAKA P G + V + APE + + SDV+SFGV L ELL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 120 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
+ C ++ L+ A+ ++ R L +++ P K L C
Sbjct: 215 T-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPCEVYHLMKNCWE 272
Query: 180 NEPKLRPRMSEVLAILE 196
E RP ++ IL+
Sbjct: 273 TEASFRPTFENLIPILK 289
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 95 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 152
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 213 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 254
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 255 LELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 299
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+IYRD K NILLD E + KL+DFGL+K + D + GT Y APE V T
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 104 TKSDVYSFGVVLLELLSG 121
+D +SFGV++ E+L+G
Sbjct: 205 QSADWWSFGVLMFEMLTG 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 86 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 143 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 121 GR 122
GR
Sbjct: 199 GR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L + G P + KV+I KGLT+L + + ++++RD K SNIL+++
Sbjct: 86 MDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL DFG++ G D ++ +GT Y +PE + + +SD++S G+ L+E+
Sbjct: 143 EIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 121 GR 122
GR
Sbjct: 199 GR 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+IYRD K NILLD E + KL+DFGL+K + D + GT Y APE V T
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 104 TKSDVYSFGVVLLELLSG 121
+D +SFGV++ E+L+G
Sbjct: 205 QSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+IYRD K NILLD E + KL+DFGL+K + D + GT Y APE V T
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 205
Query: 104 TKSDVYSFGVVLLELLSG 121
+D +SFGV++ E+L+G
Sbjct: 206 QSADWWSFGVLMFEMLTG 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 87 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 138
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 139 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 197 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 239
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 240 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 161
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 222 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 263
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 264 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D + ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDMGA--VHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 225
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C P +RP E
Sbjct: 226 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 191 VLAILE 196
++ +L+
Sbjct: 282 IVNLLK 287
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 32/231 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 160
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 221 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 262
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR-QTGPV 219
L C PK+RP E++ +I E +E SE ++ + PV
Sbjct: 263 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKMENNPV 313
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 110 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 167
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 228 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 269
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHRQTGP 218
L C PK+RP E++ +I E +E SE ++ P
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 394
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 395 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 453 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 495
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 496 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQXQPG 532
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GFVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 28/152 (18%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
V++RD K N+LLDA NAK++DFGL+ G+ S G+ YAAPE V +GRL
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 104 T--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ 161
+ D++S GV+L LL G D V P L K + GG
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIR---------GGV 227
Query: 162 Y--PQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+ P+ + ATL + L +P R + ++
Sbjct: 228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 99 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 153
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 154 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 211
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 212 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 254
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 255 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y
Sbjct: 153 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 207
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 258
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 259 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y
Sbjct: 151 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 205
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 256
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 257 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 116 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 170
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 171 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 228
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 229 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 271
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 272 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 311
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 312 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 370 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 413 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQXQPG 449
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 5 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 64
+L ++ GP + A+ I G+ HD ++++RD K NIL+D+ K+
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQI--LDGIKHAHDM--RIVHRDIKPQNILIDSNKTLKI 152
Query: 65 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGR 122
DFG+AKA T + V+GT Y +PE A G T + +D+YS G+VL E+L G
Sbjct: 153 FDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 99 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 153
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 154 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 211
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 212 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 254
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 255 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 126 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 180
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 181 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 238
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 239 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 281
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 282 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 321
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 139 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 192
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 139 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 192
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 129 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 182
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 117 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 170
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 311
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 312 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 370 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 413 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQXQPG 449
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 34/191 (17%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++RD A N ++ +F K+ DFG+
Sbjct: 124 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGM--- 176
Query: 73 GPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 127
T D + G G + APE + G TT SD++SFGVVL E+
Sbjct: 177 --TRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------- 225
Query: 128 TKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
SL + +PY LS+++ L +MD Q P L C PK+R
Sbjct: 226 ------TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMR 276
Query: 186 PRMSEVLAILE 196
P E++ +L+
Sbjct: 277 PTFLEIVNLLK 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 160
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 221 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 262
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 263 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 307
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 123 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 176
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 311
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 312 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 370 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 413 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 449
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 137 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 190
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 119 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 172
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 154
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 155 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 215 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 256
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 257 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 301
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 161
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 222 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 263
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 264 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 308
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 101 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 158
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 159 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 218
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 219 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 260
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 261 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL +LH I+RD KA NILL+ E +AKL+DFG+ AG D V+GT +
Sbjct: 136 KGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFW 191
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE + +D++S G+ +E+ G+
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL++ L + Q + V V + G A G+ +L D ++RD A NIL+++
Sbjct: 128 MENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINS 182
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL + D + G + +PE +A + T+ SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLGRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + +D P L
Sbjct: 241 WEVMSYG-----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 214
L C + RP+ ++++IL++L S K+ S R
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L FLHD +IYRD K N+LLD E + KL+DFG+ K G T + GT Y A
Sbjct: 137 LMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIA 192
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + D ++ GV+L E+L G
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y
Sbjct: 127 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 181
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 232
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 233 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 83 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 134
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 135 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 193 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 235
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 236 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 272
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 189
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N ++ +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 190 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 249
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 250 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 291
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 292 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 336
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
KV+I +GL +L + + Q+++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 118 KVSIAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 172
Query: 85 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
+GT Y APE + + +SD++S G+ L+EL GR
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 85 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 136
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 137 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 195 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 237
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 238 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 274
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 95 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 150
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 151 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 119 LS 120
++
Sbjct: 210 VT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 97 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 152
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 153 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 119 LS 120
++
Sbjct: 212 VT 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 482 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 535
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + + ++ + + + ++H RD +A+NI
Sbjct: 91 MNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH--------RDLRAANI 142
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 143 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 201 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 243
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC EP+ RP + A LE + +EP Q G
Sbjct: 244 LMCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 280
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 114
L+ K++DFGLA+ + T + APE GR T KSDV+SFG++
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGIL 204
Query: 115 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATL 173
L EL + K +V PY R++ ++ P + + L
Sbjct: 205 LTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 174 ALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
QC +P+ RP + A LE + +EP Q G
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 89 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 144
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 145 TLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 119 LS 120
++
Sbjct: 204 VT 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q THG
Sbjct: 481 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKW 534
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHG 90
+G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 207
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y APE + + + D++S G +L LL G K E S + + Y+ K+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNE 258
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
+ + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 259 YSV---------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 98 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 153
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 154 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 119 LS 120
++
Sbjct: 213 VT 214
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 34/205 (16%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+ G L N+L R + L + +++ +G+ FL Q I+RD A N L+D +
Sbjct: 85 ISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES--HQFIHRDLAARNCLVDRDL 141
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFG+ + D +VS+ +GT ++APE + ++KSDV++FG+++ E
Sbjct: 142 CVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197
Query: 118 LLS-GRCAVD---KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 173
+ S G+ D ++V ++ +S +L+R P A+ T +
Sbjct: 198 VFSLGKMPYDLYTNSEVVLK----------VSQGHRLYR----------PHLASDTIYQI 237
Query: 174 ALQCLNNEPKLRPRMSEVLAILERL 198
C + P+ RP ++L+ +E L
Sbjct: 238 MYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A GL LH +IYRD K NILLD E + KL+DFGL+K D + GT
Sbjct: 140 ALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVE 195
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V + +D +S+GV++ E+L+G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 91 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 146
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 147 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 119 LS 120
++
Sbjct: 206 VT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 89 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 144
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 119 LS 120
++
Sbjct: 204 VT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 95 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 150
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 151 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 119 LS 120
++
Sbjct: 210 VT 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 90 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 145
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 146 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 119 LS 120
++
Sbjct: 205 VT 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 14 GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG 73
P LS ++M I A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 133 APPSLSKMIQMAGEI--ADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 74 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIE 133
D + + + +PE + G TT SDV+SFGVVL E+
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI--------------- 233
Query: 134 QSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+L + +PY LS+++ L +M+ L + P L C PK+RP E+
Sbjct: 234 ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 192 L-AILERLEAPKNSAKLSQSEPHRQTGP 218
+ +I E +E SE ++ P
Sbjct: 291 ISSIKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 89 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 144
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 119 LS 120
++
Sbjct: 204 VT 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 94 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 149
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 150 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 119 LS 120
++
Sbjct: 209 VT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 99 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 154
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 155 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 119 LS 120
++
Sbjct: 214 VT 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHG 90
+G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT
Sbjct: 137 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 191
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y APE + + + D++S G +L LL G K E S + + Y+ K+
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNE 242
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 193
+ + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 243 YSV---------PRHINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A GL FL +IYRD K N++LD+E + K++DFG+ K T + GT
Sbjct: 452 AIGLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPD 507
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
Y APE +A D ++FGV+L E+L+G+
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 89 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 144
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 119 LS 120
++
Sbjct: 204 VT 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + + ++ + + + ++H RD +A+NI
Sbjct: 91 MNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH--------RDLRAANI 142
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 114
L+ K++DFGLA+ + T + APE GR T KSDV+SFG++
Sbjct: 143 LVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGIL 201
Query: 115 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATL 173
L EL + K +V PY R++ ++ P + + L
Sbjct: 202 LTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDL 244
Query: 174 ALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
QC EP+ RP + A LE + +EP Q G
Sbjct: 245 MCQCWRKEPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 280
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+RD +A+NIL+
Sbjct: 84 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSD 139
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 140 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 119 LS 120
++
Sbjct: 199 VT 200
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
+P GSL +H+ + GPQ L +W V++ AKG+ +L E +++R+ A N+L
Sbjct: 114 LPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLE--EHGMVHRNLAARNVL 165
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
L + +++DFG+A P D+ + ++ + A E + G+ T +SDV+S+GV +
Sbjct: 166 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 225
Query: 116 LELLS 120
EL++
Sbjct: 226 WELMT 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHG 90
+G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPN 207
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y APE + + + D++S G +L LL G K E S + + Y+ K+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNE 258
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
+ + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 259 YSV---------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHG 90
+G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPN 207
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y APE + + + D++S G +L LL G K E S + + Y+ K+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNE 258
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
+ + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 259 YSV---------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P LS ++M I A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 PPSLSKMIQMAGEI--ADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQ 134
D + + + +PE + G TT SDV+SFGVVL E+
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------A 224
Query: 135 SLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
+L + +PY LS+++ L +M+ L + P L C PK+RP E++
Sbjct: 225 TLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
Query: 193 -AILERLEAPKNSAKLSQSEPHR 214
+I E +E SE ++
Sbjct: 282 SSIKEEMEPGFREVSFYYSEENK 304
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
+P GSL +H+ + GPQ L +W V++ AKG+ +L E +++R+ A N+L
Sbjct: 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLE--EHGMVHRNLAARNVL 147
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
L + +++DFG+A P D+ + ++ + A E + G+ T +SDV+S+GV +
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 207
Query: 116 LELLS 120
EL++
Sbjct: 208 WELMT 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 115 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 231
Query: 150 L 150
+
Sbjct: 232 I 232
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KGSL + L + L + +A A G+ ++ I+RD +++NIL+
Sbjct: 85 MNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE--RMNYIHRDLRSANILVGNGL 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGLA+ + T + APE GR T KSDV+SFG++L EL
Sbjct: 143 ICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTEL-- 199
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
V K +V PY + R++ ++ PQ + L + C
Sbjct: 200 ----VTKGRV-----------PYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWK 244
Query: 180 NEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
+P+ RP + + LE + +EP Q G
Sbjct: 245 KDPEERPTFEYLQSFLEDY--------FTATEPQYQPG 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 31/225 (13%)
Query: 1 MPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 52
M +G L+++L P+ P S + +++A A G+ +L+ ++ ++RD A
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAAR 154
Query: 53 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
N + +F K+ DFG+ + D + + + +PE + G TT SDV+SFG
Sbjct: 155 NCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 170
VVL E+ +L + +PY LS+++ L +M+ L + P
Sbjct: 215 VVLWEI---------------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDML 256
Query: 171 ATLALQCLNNEPKLRPRMSEVL-AILERLEAPKNSAKLSQSEPHR 214
L C PK+RP E++ +I E +E SE ++
Sbjct: 257 LELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENK 301
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-- 90
G+ +L ES ++RD A N+LL + AK+SDFGL+KA D Q THG
Sbjct: 123 GMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQ---THGKW 176
Query: 91 ---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + ++KSDV+SFGV++ E S
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y
Sbjct: 129 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNY 183
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 234
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 235 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A GL FL +IYRD K N++LD+E + K++DFG+ K T + GT
Sbjct: 131 AIGLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPD 186
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
Y APE +A D ++FGV+L E+L+G+
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P PL + KGL +LH I+RD KA+N+LL + + KL+DFG+ AG
Sbjct: 110 PGPLEETYIATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGV--AGQ 165
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQ 134
D +GT + APE + K+D++S G+ +EL G
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG------------- 212
Query: 135 SLVDWAKPYLSD---KRKLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRM 188
+P SD R LF I L GQ+ + CLN +P+ RP
Sbjct: 213 ------EPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEA----CLNKDPRFRPTA 262
Query: 189 SEVL 192
E+L
Sbjct: 263 KELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y
Sbjct: 129 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNY 183
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 234
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 235 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGY 91
G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y
Sbjct: 133 GCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNY 187
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE ++ + + DV+S G ++ LL G+ + + + + YL K+ +
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLRIKKNEY 238
Query: 152 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I P+ AA+L + L +P RP ++E+L
Sbjct: 239 SI---------PKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-XQEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 116 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 232
Query: 150 L 150
+
Sbjct: 233 I 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y
Sbjct: 117 GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 93 APEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRK 149
APE + + DV+S G+VL +L+G D+ Q DW K YL+ +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKK 233
Query: 150 L 150
+
Sbjct: 234 I 234
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ +A A+G+ +LH +I+RD K++NI L K+ DFGLA +
Sbjct: 135 IDIARQTAQGMDYLH--AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 84 QVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSG 121
Q G+ + APE + + +SDVYS+G+VL EL++G
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD A+NI
Sbjct: 94 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLAAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT +
Sbjct: 130 KGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFW 185
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE + +K+D++S G+ +EL G + L + LF
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLF 229
Query: 152 RIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I L G Y + CLN EP RP E+L
Sbjct: 230 LIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 269
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L HL + G S A A GL +H+ V+YRD K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHG 329
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLLELL 119
+ ++SD GLA + + H S +GTHGY APE + G + +D +S G +L +LL
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 120 SG 121
G
Sbjct: 386 RG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L HL + G S A A GL +H+ V+YRD K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHG 329
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLLELL 119
+ ++SD GLA + + H S +GTHGY APE + G + +D +S G +L +LL
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 120 SG 121
G
Sbjct: 386 RG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L HL + G S A A GL +H+ V+YRD K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHG 329
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLLELL 119
+ ++SD GLA + + H S +GTHGY APE + G + +D +S G +L +LL
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 120 SG 121
G
Sbjct: 386 RG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L HL + G S A A GL +H+ V+YRD K +NILLD
Sbjct: 273 MNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHG 328
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLLELL 119
+ ++SD GLA + + H S +GTHGY APE + G + +D +S G +L +LL
Sbjct: 329 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
Query: 120 SG 121
G
Sbjct: 385 RG 386
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 3 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 62
KG+LE + +R + L + +++ KG+ ++H ++I+RD K SNI L
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVDTKQV 175
Query: 63 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
K+ DFGL + G RT + GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 176 KIGDFGLVTSLKNDGKRT----RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH- 230
Query: 122 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 181
V T + D +SD I D K TL + L+ +
Sbjct: 231 ---VCDTAFETSKFFTDLRDGIISD------IFDKK------------EKTLLQKLLSKK 269
Query: 182 PKLRPRMSEVLAIL 195
P+ RP SE+L L
Sbjct: 270 PEDRPNTSEILRTL 283
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +E V+YRD K N++LD + + K++DFGL K G T + GT Y A
Sbjct: 264 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLA 320
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
PE + D + GVV+ E++ GR Y D KLF +
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFEL 363
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
+ + ++P+ A +L L +PK R
Sbjct: 364 ILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A ++G+ +L AE ++++RD A NIL+ K+SDFGL++ D +
Sbjct: 153 ISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 84 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 143
Q + A E + TT+SDV+SFGV+L E+++ +G PY
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG--------GNPY 253
Query: 144 LS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+LF ++ T + P + L LQC EP RP +++ LE++
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KG L + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KG L + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 94 MSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 145
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGLA+ D + + Q + APE GR T KSDV+SFG+
Sbjct: 146 LVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 204 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 247 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +E V+YRD K N++LD + + K++DFGL K G T + GT Y A
Sbjct: 261 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLA 317
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
PE + D + GVV+ E++ GR Y D KLF +
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFEL 360
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
+ + ++P+ A +L L +PK R
Sbjct: 361 ILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT +
Sbjct: 115 KGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFW 170
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE + +K+D++S G+ +EL G + L + LF
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLF 214
Query: 152 RIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I L G Y + CLN EP RP E+L
Sbjct: 215 LIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L R+ + + + G G+ +L D + ++RD A NIL+++
Sbjct: 112 MENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNL 168
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFG+++ D + G + APE +A + T+ SDV+S+G+V+ E
Sbjct: 169 VCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 226
Query: 118 LLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
++S +PY + + + ++ P L L
Sbjct: 227 VMSYG-----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 269
Query: 177 CLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 211
C E RP+ +++ +L++L NS K + SE
Sbjct: 270 CWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 304
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A ++G+ +L AE ++++RD A NIL+ K+SDFGL++ D +
Sbjct: 153 ISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 84 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 143
Q + A E + TT+SDV+SFGV+L E+++ +G PY
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG--------GNPY 253
Query: 144 LS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+LF ++ T + P + L LQC EP RP +++ LE++
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L R + A + A +G+ +LH I+R A N+LLD +
Sbjct: 95 VPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLH--AQHYIHRALAARNVLLDNDR 149
Query: 61 NAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGLAKA P G + V + APE + + SDV+SFGV L ELL
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 120 S 120
+
Sbjct: 210 T 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT +
Sbjct: 115 KGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFW 170
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE + +K+D++S G+ +EL G + L + LF
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLF 214
Query: 152 RIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I L G Y + CLN EP RP E+L
Sbjct: 215 LIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++R+ A N ++ +F K+ DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 225
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C P +RP E
Sbjct: 226 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 191 VLAILE 196
++ +L+
Sbjct: 282 IVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 13 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 72
R P L ++M I A G+ +L+ + ++R+ A N ++ +F K+ DFG+ +
Sbjct: 125 RPPPTLQEMIQMAAEI--ADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 73 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 132
D + + + APE + G TT SD++SFGVVL E+
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------------- 226
Query: 133 EQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 190
SL + +PY LS+++ L +MD Q P L C P +RP E
Sbjct: 227 -TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLE 282
Query: 191 VLAILE 196
++ +L+
Sbjct: 283 IVNLLK 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L R + A + A +G+ +LH I+R A N+LLD +
Sbjct: 94 VPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLH--AQHYIHRALAARNVLLDNDR 148
Query: 61 NAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
K+ DFGLAKA P G + V + APE + + SDV+SFGV L ELL
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 120 S 120
+
Sbjct: 209 T 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ L FLH +QVI+RD K+ NILL + + KL+DFG A T +++ ST V GT +
Sbjct: 127 QALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYW 182
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE V K D++S G++ +E++ G
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 29 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G A G+ +L A+ ++RD A NIL+++ K+SDFGL++ D V T G
Sbjct: 153 GIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVYTTTGGK 209
Query: 89 H--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 145
+ APE + + T+ SDV+S+G+V+ E++S +PY
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-----------------ERPYWDM 252
Query: 146 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 205
+ + + ++ P L L C E RP+ +++ IL+++ NSA
Sbjct: 253 SNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPNSA 312
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A ++G+ +L AE +++RD A NIL+ K+SDFGL++ D +
Sbjct: 153 ISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 84 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 143
Q + A E + TT+SDV+SFGV+L E+++ +G PY
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG--------GNPY 253
Query: 144 LS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+LF ++ T + P + L LQC EP RP +++ LE++
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 10 LFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 68
L R GP A +K + KGL +LH + I+RD KA+N+LL + + KL+DFG
Sbjct: 111 LLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFG 165
Query: 69 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKT 128
+ AG D +GT + APE + +K+D++S G+ +EL G
Sbjct: 166 V--AGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG------- 216
Query: 129 KVGIEQSLVDWAKPYLSD---KRKLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEP 182
+P SD R LF I L G + + + CLN +P
Sbjct: 217 ------------EPPNSDMHPMRVLFLIPKNNPPTLVGDFTK----SFKEFIDACLNKDP 260
Query: 183 KLRPRMSEVL 192
RP E+L
Sbjct: 261 SFRPTAKELL 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 1 MPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 54
M KGSL + L + R PQ + A ++ + + + ++H RD +A+NI
Sbjct: 261 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANI 312
Query: 55 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGV 113
L+ K++DFGL + D + + Q + APE GR T KSDV+SFG+
Sbjct: 313 LVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 114 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 172
+L EL + K +V PY R++ ++ P + +
Sbjct: 371 LLTELTT------KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHD 413
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 217
L QC +P+ RP + A LE + +EP Q G
Sbjct: 414 LMCQCWRKDPEERPTFEYLQAFLEDY--------FTSTEPQXQPG 450
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 28/140 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA---------ESQVIYRDFKASN 53
KGSL ++L +G ++W VA ++GL++LH+ + + +RDFK+ N
Sbjct: 97 KGSLTDYL--KG-NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN 153
Query: 54 ILLDAEFNAKLSDFGLAK----AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT------ 103
+LL ++ A L+DFGLA P GD TH QV GT Y APE V G +
Sbjct: 154 VLLKSDLTAVLADFGLAVRFEPGKPPGD-TH--GQV-GTRRYMAPE-VLEGAINFQRDAF 208
Query: 104 TKSDVYSFGVVLLELLSGRC 123
+ D+Y+ G+VL EL+S RC
Sbjct: 209 LRIDMYAMGLVLWELVS-RC 227
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 29 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G A G+ +L AE ++RD A NIL+++ K+SDFGL++ T +G
Sbjct: 126 GIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 89 H---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 145
+ APE +A + T+ SD +S+G+V+ E++S +PY
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG-----------------ERPYWD 226
Query: 146 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ + ++ P + L L C + RPR +V++ L+++
Sbjct: 227 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL + F + P + + + +A A+G+ F+ E I+R+ +A+NIL+
Sbjct: 85 MENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRNLRAANILVSD 140
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLA+ + T + APE + G T KSDV+SFG++L E+
Sbjct: 141 TLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 119 LS 120
++
Sbjct: 200 VT 201
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +E V+YRD K N++LD + + K++DFGL K G T GT Y A
Sbjct: 123 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLA 179
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
PE + D + GVV+ E++ GR Y D KLF +
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFEL 222
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
+ + ++P+ A +L L +PK R
Sbjct: 223 ILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +E V+YRD K N++LD + + K++DFGL K G T GT Y A
Sbjct: 121 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLA 177
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
PE + D + GVV+ E++ GR Y D KLF +
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFEL 220
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
+ + ++P+ A +L L +PK R
Sbjct: 221 ILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +E V+YRD K N++LD + + K++DFGL K G T GT Y A
Sbjct: 122 LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLA 178
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
PE + D + GVV+ E++ GR Y D KLF +
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFEL 221
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
+ + ++P+ A +L L +PK R
Sbjct: 222 ILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT +
Sbjct: 135 KGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFW 190
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 151
APE + +K+D++S G+ +EL G + L + LF
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLF 234
Query: 152 RIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I L G Y + CLN EP RP E+L
Sbjct: 235 LIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 274
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P G L + L R + L + + + KG+ +L + ++RD A NIL+++E
Sbjct: 95 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEA 151
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL
Sbjct: 152 HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 119 LS 120
+
Sbjct: 211 FT 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L R+ + + + G G+ +L D ++RD A NIL+++
Sbjct: 91 MENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--SYVHRDLAARNILVNSNL 147
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFG+++ D + G + APE +A + T+ SDV+S+G+V+ E
Sbjct: 148 VCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 205
Query: 118 LLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
++S +PY + + + ++ P L L
Sbjct: 206 VMSYG-----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 248
Query: 177 CLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 211
C E RP+ +++ +L++L NS K + SE
Sbjct: 249 CWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 283
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL+ L R+ + + + G G+ +L D ++RD A NIL+++
Sbjct: 97 MENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--SYVHRDLAARNILVNSNL 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFG+++ D + G + APE +A + T+ SDV+S+G+V+ E
Sbjct: 154 VCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 211
Query: 118 LLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQ 176
++S +PY + + + ++ P L L
Sbjct: 212 VMSYG-----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 254
Query: 177 CLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 211
C E RP+ +++ +L++L NS K + SE
Sbjct: 255 CWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 289
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P G L + L R + L + + + KG+ +L + ++RD A NIL+++E
Sbjct: 96 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEA 152
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL
Sbjct: 153 HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 119 LS 120
+
Sbjct: 212 FT 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL++ L R+ + + + G A G+ +L A+ ++RD A NIL+++
Sbjct: 116 MENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRDLAARNILVNSNL 172
Query: 61 NAKLSDFGLAK--AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ T D T+ T +G + APE + + T+ SDV+S+G+V+
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + ++ P L
Sbjct: 231 WEVMSYG-----------------ERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 273
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAK 206
L C + RP+ +++ L+++ NS K
Sbjct: 274 LDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 305
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P G L + L R + L + + + KG+ +L + ++RD A NIL+++E
Sbjct: 108 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEA 164
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
+ K++DFGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL
Sbjct: 165 HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 119 LS 120
+
Sbjct: 224 FT 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 29 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G A G+ +L AE ++RD A NIL+++ K+SDFGL++ T +G
Sbjct: 124 GIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 89 H---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 145
+ APE +A + T+ SD +S+G+V+ E++S +PY
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG-----------------ERPYWD 224
Query: 146 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ + ++ P + L L C + RPR +V++ L+++
Sbjct: 225 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V G+L
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKL 183
Query: 103 TT--KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S G+VL +L GR D
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P G L + L R + L + + + KG+ +L + ++RD A NIL+++E
Sbjct: 92 LPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEA 148
Query: 61 NAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
+ K++DFGLAK P D V + APE ++ + +SDV+SFGVVL EL
Sbjct: 149 HVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 120 S 120
+
Sbjct: 209 T 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDA 58
M GSL+ L + Q + V V + G + G+ +L D ++RD A NIL+++
Sbjct: 105 MENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAGMKYLSDM--GYVHRDLAARNILINS 159
Query: 59 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ D + G + APE +A + T+ SDV+S+G+V+
Sbjct: 160 NLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVM 217
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + + ++ P L
Sbjct: 218 WEVVSYG-----------------ERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLM 260
Query: 175 LQCLNNEPKLRPRMSEVLAILERL 198
L C E RP+ E++ +L++L
Sbjct: 261 LDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 20 WAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA------KAG 73
W+ R+ A A G+ +LH +I+RD + N L+ N ++DFGLA K
Sbjct: 107 WSQRVSFAKDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
Query: 74 PTG-------DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
P G DR T V+G + APE + K DV+SFG+VL E++ GR D
Sbjct: 165 PEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ RT +S GT
Sbjct: 119 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLD 172
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 219
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQS 210
R+ T +P A L + L + P RP + EV LE NS+K S S
Sbjct: 220 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREV---LEHPWITANSSKPSNS 271
Query: 211 E 211
+
Sbjct: 272 Q 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T++ GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ L FLH +QVI+R+ K+ NILL + + KL+DFG A T +++ ST V GT +
Sbjct: 128 QALEFLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYW 183
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE V K D++S G++ +E++ G
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHG 90
+ L FLH +QVI+RD K+ NILL + + KL+DFG A+ P + ++++GT
Sbjct: 127 QALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPY 181
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
+ APE V K D++S G++ +E++ G
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 35/206 (16%)
Query: 1 MPKGSLENHL----FRRGPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +H+ R G Q L +W +++ AKG+++L D ++++RD A N+L
Sbjct: 100 MPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLEDV--RLVHRDLAARNVL 151
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + + K++DFGLA+ + + + + A E + R T +SDV+S+GV +
Sbjct: 152 VKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTV 211
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHT--AAT 172
EL++ AKPY R++ +++ G + PQ T
Sbjct: 212 WELMTFG-----------------AKPYDGIPAREIPDLLEK--GERLPQPPICTIDVYM 252
Query: 173 LALQCLNNEPKLRPRMSEVLAILERL 198
+ ++C + + RPR E+++ R+
Sbjct: 253 IMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ L FLH +QVI+RD K+ NILL + + KL+DFG A T +++ S V GT +
Sbjct: 128 QALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYW 183
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE V K D++S G++ +E++ G
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ L FLH +QVI+RD K+ NILL + + KL+DFG A T +++ S V GT +
Sbjct: 127 QALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYW 182
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
APE V K D++S G++ +E++ G
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 144 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 197
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 244
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 245 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 95 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 151
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 152 RVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 211 FT---YIEKSK 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGTH 89
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTP 353
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
G+ APE + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGTH 89
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTP 353
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
G+ APE + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P PL + VA A G+ +L A ++RD N L+ K+ DFG+++
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ D V + M + PE + + TT+SDV+SFGVVL E+ +
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGTH 89
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTP 353
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
G+ APE + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGTH 89
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 301 GLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTP 353
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
G+ APE + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 93 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 149
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 150 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 209 FT---YIEKSK 216
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P PL + VA A G+ +L A ++RD N L+ K+ DFG+++
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ D V + M + PE + + TT+SDV+SFGVVL E+ +
Sbjct: 181 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 61
KG+LE + +R + L + +++ KG+ ++H ++I RD K SNI L
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQ 160
Query: 62 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
K+ DFGL + + S GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 161 VKIGDFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH- 216
Query: 122 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 181
V T + D +SD I D K TL + L+ +
Sbjct: 217 ---VCDTAFETSKFFTDLRDGIISD------IFDKK------------EKTLLQKLLSKK 255
Query: 182 PKLRPRMSEVLAIL 195
P+ RP SE+L L
Sbjct: 256 PEDRPNTSEILRTL 269
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 94 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 150
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 151 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 210 FT---YIEKSK 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 98 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 154
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 155 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 214 FT---YIEKSK 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 95 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 151
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 152 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 211 FT---YIEKSK 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 100 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 156
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 157 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 216 FT---YIEKSK 223
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 99 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 155
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 156 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 215 FT---YIEKSK 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P PL + VA A G+ +L A ++RD N L+ K+ DFG+++
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ D V + M + PE + + TT+SDV+SFGVVL E+ +
Sbjct: 210 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 113 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 169
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 170 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 229 FT---YIEKSK 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 123 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 223
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 224 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 95 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 151
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 152 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 211 FT---YIEKSK 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ + G+ YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 101 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 157
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 158 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 217 FT---YIEKSK 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 126 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 182
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 183 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 242 FT---YIEKSK 249
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 102 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 158
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 159 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 218 FT---YIEKSK 225
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 113 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 169
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 170 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 229 FT---YIEKSK 236
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 135 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 188
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 236 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 12 RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK 71
R+ L + + +A A G+ +L A ++RD N L+ A K+ DFG+++
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
Query: 72 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ D V M + PE + + TT+SDV+SFGV+L E+ +
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 123 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLD 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 223
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 224 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A G+ +L + V+++D N+L+ + N K+SD GL + D + +
Sbjct: 155 AAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 149
+ APE + G+ + SD++S+GVVL E+ S G++ PY +
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---------YGLQ--------PYCGYSNQD 255
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+ ++ + P L ++C N P RPR ++
Sbjct: 256 VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L ++ + + ++ KG+ +L + I+R+ NIL++ E
Sbjct: 96 LPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRNLATRNILVENEN 152
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + + G + APE + + + SDV+SFGVVL EL
Sbjct: 153 RVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 212 FT---YIEKSK 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
+P++ + + A+G+ FL + + I+RD A NILL K+ DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 135
+ APE + +TKSDV+S+GV+L E+ S G
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGSPYP 303
Query: 136 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
V + + S R+ R+ + P+ + + L C + +PK RPR +E++ L
Sbjct: 304 GVQMDEDFCSRLREGMRM-------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Query: 196 ERL 198
L
Sbjct: 357 GDL 359
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 119 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLD 172
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 219
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 220 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 123 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 223
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 224 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A G+ +L + V+++D N+L+ + N K+SD GL + D + +
Sbjct: 138 AAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 195
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 149
+ APE + G+ + SD++S+GVVL E+ S G++ PY +
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---------YGLQ--------PYCGYSNQD 238
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+ ++ + P L ++C N P RPR ++
Sbjct: 239 VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 123 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 223
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 224 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V +G+L
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 178
Query: 103 TT--KSDVYSFGVVLLELLSGRCAVDKTKV 130
+ DV+S GV+L +L R D +
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESI 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 117 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 170
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 217
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 218 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V +G+L
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 182
Query: 103 TT--KSDVYSFGVVLLELLSGRCAVDKTKV 130
+ DV+S GV+L +L R D +
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESI 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V +G+L
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 188
Query: 103 TT--KSDVYSFGVVLLELLSGRCAVDKTKV 130
+ DV+S GV+L +L R D +
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESI 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL +L ++ + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 98 LPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 154
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 155 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 214 FT---YIEKSK 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 122 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 175
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 222
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 223 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V +G+L
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 187
Query: 103 TT--KSDVYSFGVVLLELLSGRCAVDKTKV 130
+ DV+S GV+L +L R D +
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESI 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A I+RD A NILL K+ DFGLA+ V
Sbjct: 170 VAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 227
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+S+G+ L EL S +G + PY +
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------SSPYPGMPVD 270
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 271 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T GT Y
Sbjct: 122 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYL 177
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 220
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 221 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 41 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+ ++++RD KA N+LLDA+ N K++DFG + G + G+ YAAPE
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGK 185
Query: 101 RLTT-KSDVYSFGVVLLELLSGRCAVD 126
+ + DV+S GV+L L+SG D
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T + GT Y
Sbjct: 120 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 175
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 218
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 219 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T GT Y
Sbjct: 117 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYL 172
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 215
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 216 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T + GT Y
Sbjct: 117 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 172
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 215
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 216 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T GT Y
Sbjct: 117 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYL 172
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 215
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 216 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 115 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 168
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 215
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 216 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T GT Y
Sbjct: 117 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYL 172
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 215
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 216 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 74
P L+ + + +A A G+ +L A ++RD N L+ K+ DFG+++
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIE 133
+ D V M + PE + + TT+SDV+S GVVL E+ + G+
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK----------- 228
Query: 134 QSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+P+ LS+ + I ++ Q P+ L L C EP +R + +
Sbjct: 229 -------QPWYQLSNNEVIECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280
Query: 192 LAILERL 198
+L+ L
Sbjct: 281 HTLLQNL 287
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH + V+YRD K N++LD + + K++DFGL K G + T + GT Y
Sbjct: 117 ALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 172
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 152
APE + D + GVV+ E++ GR Y D +LF
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHERLFE 215
Query: 153 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 185
++ + ++P+ + A +L L +PK R
Sbjct: 216 LILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G+ YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G+ YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G+ YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A I+RD A NILL K+ DFGLA+ V
Sbjct: 172 VAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 229
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+S+G+ L EL S +G + PY +
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------SSPYPGMPVD 272
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 273 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A I+RD A NILL K+ DFGLA+ V
Sbjct: 177 VAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 234
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+S+G+ L EL S +G + PY +
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------SSPYPGMPVD 277
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 278 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A I+RD A NILL K+ DFGLA+ V
Sbjct: 177 VAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV 234
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+S+G+ L EL S +G + PY +
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------SSPYPGMPVD 277
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 278 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT--GDRTHVSTQVMGTH 89
+GL ++H A QVI+RD K SN+L++ K+ DFG+A+ T + + T+ + T
Sbjct: 170 RGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 90 GYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + T++ D++S G + E+L+ R
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G+ YAAPE +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYD 183
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
K+ + K L L + ++I+RD K SNILLD N KL DFG+ +G D T+
Sbjct: 129 KITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVDSI-AKTR 184
Query: 85 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGR 122
G Y APE + + +SDV+S G+ L EL +GR
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 146
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 147 LVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 206 ---------YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 248
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 249 WNPSDRPSFAEIHQAFETM 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 96 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 213 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 256 WNPSDRPSFAEIHQAFETM 274
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 144 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLD 197
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 244
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 245 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 146
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 147 LVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 206 ---------YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 248
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 249 WNPSDRPSFAEIHQAFETM 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A A+G+ +L ++ Q I+RD A NIL+ + AK++DFGL++ G +V
Sbjct: 145 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 197
Query: 84 QVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 141
+ MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG--------GT 240
Query: 142 PYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
PY +L+ + + P L QC +P RP +++L L R+
Sbjct: 241 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A A+G+ +L ++ Q I+RD A NIL+ + AK++DFGL++ G +V
Sbjct: 135 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 187
Query: 84 QVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 141
+ MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG--------GT 230
Query: 142 PYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
PY +L+ + + P L QC +P RP +++L L R+
Sbjct: 231 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A I+RD A NILL K+ DFGLA+ V
Sbjct: 154 VAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 211
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+S+G+ L EL S +G + PY +
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------SSPYPGMPVD 254
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 255 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 36/190 (18%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
Q L W V++ +A L +HD ++++RD K+ NI L + +L DFG+A+
Sbjct: 126 QILDWFVQICLA------LKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--L 175
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 135
++ +GT Y +PE KSD+++ G VL EL + + A +
Sbjct: 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------- 228
Query: 136 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAA---TLALQCLNNEPKLRPRMSEVL 192
S K + +I + G +P + H + +L Q P+ RP ++ +L
Sbjct: 229 ---------SMKNLVLKI----ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
Query: 193 A---ILERLE 199
I +R+E
Sbjct: 276 EKGFIAKRIE 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
+P GSL ++L + + + ++ KG+ +L + I+RD NIL++ E
Sbjct: 98 LPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENEN 154
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K+ DFGL K P D+ + G + APE + + + SDV+SFGVVL EL
Sbjct: 155 RVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 119 LSGRCAVDKTK 129
+ ++K+K
Sbjct: 214 FT---YIEKSK 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG---DRTHVSTQVMGT 88
+GL +LH ++ I+RD KA NILL + + +++DFG++ TG R V +GT
Sbjct: 127 EGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 89 HGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 121
+ APE + R K+D++SFG+ +EL +G
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 41 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+ ++++RD KA N+LLDA+ N K++DFG + G + G YAAPE
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGK 188
Query: 101 RLTT-KSDVYSFGVVLLELLSGRCAVD 126
+ + DV+S GV+L L+SG D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG---DRTHVSTQVMGT 88
+GL +LH ++ I+RD KA NILL + + +++DFG++ TG R V +GT
Sbjct: 132 EGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 89 HGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 121
+ APE + R K+D++SFG+ +EL +G
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 45/231 (19%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 175
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 231 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 273
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA-PKNSAKLSQSEP 212
P + + C + P RP +++ L+R+ A N L S P
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLDLSMP 324
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 3 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA--------ESQVIYRDFKASNI 54
KGSL + L +SW +A A+GL +LH+ + + +RD K+ N+
Sbjct: 106 KGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162
Query: 55 LLDAEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT------TK 105
LL A ++DFGLA +AG + TH QV GT Y APE V G + +
Sbjct: 163 LLKNNLTACIADFGLALKFEAGKSAGDTH--GQV-GTRRYMAPE-VLEGAINFQRDAFLR 218
Query: 106 SDVYSFGVVLLELLSGRC 123
D+Y+ G+VL EL S RC
Sbjct: 219 IDMYAMGLVLWELAS-RC 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M GSL++ L R+ + + + G A G+ +L A+ ++R A NIL+++
Sbjct: 90 MENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRALAARNILVNSNL 146
Query: 61 NAKLSDFGLAK--AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVL 115
K+SDFGL++ T D T+ T +G + APE + + T+ SDV+S+G+V+
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 204
Query: 116 LELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLA 174
E++S +PY + + ++ P L
Sbjct: 205 WEVMSYG-----------------ERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 247
Query: 175 LQCLNNEPKLRPRMSEVLAILERLEAPKNSAK 206
L C + RP+ +++ L+++ NS K
Sbjct: 248 LDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT--GDRTHVSTQVMGTH 89
+GL ++H A QVI+RD K SN+L++ K+ DFG+A+ T + + T+ + T
Sbjct: 169 RGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 90 GYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + + T++ D++S G + E+L+ R
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLD + N K++DFG + G++ G+ YAAPE +
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYD 191
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+RD A N L+
Sbjct: 89 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 146
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 147 LVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 206 ---------YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 248
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 249 WNPSDRPSFAEIHQAFETM 267
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 175
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 231 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 273
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 164
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 165 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 220 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 262
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 263 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L + + A A+G+ +L A + I+RD
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 160
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 161 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 216 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 258
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 259 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 45/231 (19%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L + + A A+G+ +L A + I+RD
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 175
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 231 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 273
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA-PKNSAKLSQSEP 212
P + + C + P RP +++ L+R+ A N L S P
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMP 324
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 12 RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK 71
R P+ W K + L +H +V++RD K +N+ + A KL D GL +
Sbjct: 131 RLIPERTVW----KYFVQLCSALEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
Query: 72 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVG 131
+ +T + ++GT Y +PE + KSD++S G +L E+ +
Sbjct: 185 FFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA----------- 231
Query: 132 IEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP----QKAAHTAATLALQCLNNEPKLRPR 187
P+ DK L+ + YP + L C+N +P+ RP
Sbjct: 232 -------LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD 284
Query: 188 MSEVLAILERLEA 200
++ V + +R+ A
Sbjct: 285 VTYVYDVAKRMHA 297
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 168
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 169 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 224 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 266
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 267 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 175
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 231 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 273
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 167
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 168 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 223 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 265
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 266 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 123 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLD 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 223
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 224 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K+++FG + P+ R T + GT
Sbjct: 120 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLD 173
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 220
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 221 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--G 90
G+ +L E ++RD A N+LL AK+SDFGL+KA D ++ + + G
Sbjct: 122 GMKYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLK 178
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + +++SDV+S+GV + E LS
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K+++FG + P+ R T + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 175 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 232
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + T +SDV+S+G++L E+ S +G+ P + K
Sbjct: 233 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PYPGILVNSK 277
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
++++ P A ++ C EP RP ++ + L+
Sbjct: 278 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 120 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLD 173
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 220
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 221 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 LVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 213 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 256 WNPSDRPSFAEIHQAFETM 274
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ ++ I+RD +A+N+L+ K++DFGLA+ + T
Sbjct: 120 AEGMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 176
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + G T KSDV+SFG++L E+++
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 46 YRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTT 104
+RD K N+L D KL DFGL A P G++ + G+ YAAPE + L +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 105 KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY-- 162
++DV+S G++L L+ G D V ++ +K+ R G+Y
Sbjct: 190 EADVWSMGILLYVLMCGFLPFDDDNV-------------MALYKKIMR-------GKYDV 229
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
P+ + ++ L Q L +PK R M +L
Sbjct: 230 PKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 39 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 98
D V++RD K +N+ LD + N KL DFGLA+ T + +GT Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMN 189
Query: 99 TGRLTTKSDVYSFGVVLLELLSGRCAV 125
KSD++S G +L EL CA+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 3 KGSLENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRD 48
KG+L +L R P L ++ + A A+G+ +L A + I+RD
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRD 216
Query: 49 FKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLT 103
A N+L+ + K++DFGLA+ D H+ T+G + APE + T
Sbjct: 217 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 104 TKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQY 162
+SDV+SFGV+L E+ + +G PY +LF+++
Sbjct: 272 HQSDVWSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDK 314
Query: 163 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 200
P + + C + P RP +++ L+R+ A
Sbjct: 315 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ ++FLH + +++RD K NILLD +LSDFG + G++ ++ GT GY
Sbjct: 211 EAVSFLH--ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGY 265
Query: 92 AAPEYVATGRLTT------KSDVYSFGVVLLELLSG 121
APE + T + D+++ GV+L LL+G
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 92 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 149
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 150 LVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 209 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 251
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 252 WNPSDRPSFAEIHQAFETM 270
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 84 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--SVIHRDLAARNCLVGENQ 140
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 141 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT 103
+++RD KA N+LLDA+ N K++DFG + G++ G YAAPE +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYD 190
Query: 104 T-KSDVYSFGVVLLELLSGRCAVD 126
+ DV+S GV+L L+SG D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 121 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLD 174
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 221
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 222 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 39 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 98
D V++RD K +N+ LD + N KL DFGLA+ T + +GT Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMN 189
Query: 99 TGRLTTKSDVYSFGVVLLELLSGRCAV 125
KSD++S G +L EL CA+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 118 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 213 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 256 WNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 213 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 256 WNPSDRPSFAEIHQAFETM 274
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 118 ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLD 171
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQDTYKRI 218
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 219 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 95 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 152
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 153 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 212 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 254
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 255 WNPSDRPSFAEIHQAFETM 273
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 96 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 153
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 213 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 256 WNPSDRPSFAEIHQAFETM 274
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 167 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + T +SDV+S+G++L E+ S +G+ P + K
Sbjct: 225 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PYPGILVNSK 269
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
++++ P A ++ C EP RP ++ + L+
Sbjct: 270 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q +S V + +A + + +L + I+R+ A N L+
Sbjct: 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENH 355
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 356 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 415 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 457
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 458 WNPSDRPSFAEIHQAFETM 476
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 119 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLD 172
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
Y PE + K D++S GV+ E L G+ + A Y +++
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETYKRI 219
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
R+ T +P A L + L + P RP + EVL
Sbjct: 220 SRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 85 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQ 141
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 142 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 82 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQ 138
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 139 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
K+A+ K L LH S VI+RD K SN+L++A K+ DFG+ +G D T
Sbjct: 157 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTI 212
Query: 85 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
G Y APE + + KSD++S G+ ++EL R D W
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WG 261
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
P+ ++L ++++ K + QCL K RP E++
Sbjct: 262 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 7 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 66
E L + +PL + + A+G+ FL A I+RD A N+LL AK+ D
Sbjct: 138 EADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGD 195
Query: 67 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
FGLA+ V + APE + T +SDV+S+G++L E+ S
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------ 249
Query: 127 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 186
+G+ P + K ++++ P A ++ C EP RP
Sbjct: 250 ---LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 300
Query: 187 RMSEVLAILER 197
++ + L+
Sbjct: 301 TFQQICSFLQE 311
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L++LH+ VI+RD K+ +ILL ++ KLSDFG VS +V
Sbjct: 146 VCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFC--------AQVSKEV 195
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ T+ D++S G++++E++ G
Sbjct: 196 PKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 84 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQ 140
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 141 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 150
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 151 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 210 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 253 WNPSDRPSFAEIHQAFETM 271
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 87 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQ 143
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 144 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 91 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 149 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 208 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 251 WNPSDRPSFAEIHQAFETM 269
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H E+++++RD K N+L++ KL DFGLA+A T S V T Y
Sbjct: 119 QGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
AP+ + R +T D++S G +L E+++G+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + T +SDV+S+G++L E+ S +G+ P + K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PYPGILVNSK 275
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
++++ P A ++ C EP RP ++ + L+
Sbjct: 276 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 7 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 66
E L + +PL + + A+G+ FL A I+RD A N+LL AK+ D
Sbjct: 146 EADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGD 203
Query: 67 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
FGLA+ V + APE + T +SDV+S+G++L E+ S
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS------ 257
Query: 127 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 186
+G+ P + K ++++ P A ++ C EP RP
Sbjct: 258 ---LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 308
Query: 187 RMSEVLAILER 197
++ + L+
Sbjct: 309 TFQQICSFLQE 319
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 150
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 151 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 210 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 253 WNPSDRPSFAEIHQAFETM 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 39 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 98
D V++RD K +N+ LD + N KL DFGLA+ + + +GT Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMN 189
Query: 99 TGRLTTKSDVYSFGVVLLELLSGRCAV 125
KSD++S G +L EL CA+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + T +SDV+S+G++L E+ S +G+ P + K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PYPGILVNSK 275
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 197
++++ P A ++ C EP RP ++ + L+
Sbjct: 276 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 93 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 150
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 151 LVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 210 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 253 WNPSDRPSFAEIHQAFETM 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 104 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 161
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 162 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 221 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 263
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 264 WNPSDRPSFAEIHQAFETM 282
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+RD A N L+
Sbjct: 92 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 149
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 150 LVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 209 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 251
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 252 WNPSDRPSFAEIHQAFETM 270
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 257
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 257
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L ++L R + + + + +G+ +L +A VI+RD A N L+
Sbjct: 104 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQ 160
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K+SDFG+ + D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 161 VIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 44 VIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-- 101
+IYRD K NILLD+ + L+DFGL+K D T + GT Y AP+ V G
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKE-FVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 102 LTTKSDVYSFGVVLLELLSG 121
D +S GV++ ELL+G
Sbjct: 239 HDKAVDWWSLGVLMYELLTG 258
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L ++ G Q L +W V++ AKG+ +L E ++++RD A N+L
Sbjct: 121 MPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE--ERRLVHRDLAARNVL 172
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + + K++DFGLA+ ++ + + + A E + + T +SDV+S+GV +
Sbjct: 173 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232
Query: 116 LELLS 120
EL++
Sbjct: 233 WELMT 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 24 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 83
+ A A+G+ +L ++ Q I+R+ A NIL+ + AK++DFGL++ G +V
Sbjct: 142 LHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK- 194
Query: 84 QVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 141
+ MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG--------GT 237
Query: 142 PYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
PY +L+ + + P L QC +P RP +++L L R+
Sbjct: 238 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 248
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L +LH ++YRD K NILLD++ + L+DFGL K + T ++ GT
Sbjct: 149 ASALGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE + D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L ++ G Q L +W V++ AKG+ +L E ++++RD A N+L
Sbjct: 98 MPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE--ERRLVHRDLAARNVL 149
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + + K++DFGLA+ ++ + + + A E + + T +SDV+S+GV +
Sbjct: 150 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 209
Query: 116 LELLS 120
EL++
Sbjct: 210 WELMT 214
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 248
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 21 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 80
V + + I A+ + FLH +++RD K SNI + K+ DFGL A +
Sbjct: 164 GVCLHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 81 VSTQVM----------GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL-SGRCAVDKTK 129
M GT Y +PE + + K D++S G++L ELL S +++ +
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
Query: 130 VGIEQSLVDWAKPYLSDKRKL-FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM 188
+ ++D R L F ++ T+ +YPQ+ + L+ P RP
Sbjct: 282 I-------------ITDVRNLKFPLLFTQ---KYPQE-----HMMVQDMLSPSPTERPEA 320
Query: 189 SEVL--AILERL 198
++++ AI E L
Sbjct: 321 TDIIENAIFENL 332
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL+F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 114 QGLSFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 157 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 257
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 257
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 159 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 259
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 118 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 173
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+R+ A N L+
Sbjct: 337 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENH 394
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 395 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 454 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 496
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 497 WNPSDRPSFAEIHQAFETM 515
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
MP G+L ++L + ++ V + +A + + +L + I+RD A N L+
Sbjct: 110 MPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENH 167
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 118
K++DFGL++ TGD + APE +A + KSDV++FGV+L E+
Sbjct: 168 VVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL +LH + +++RD K +N+LLD KL+DFGLAK+ + +R + V T Y
Sbjct: 123 QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWY 178
Query: 92 AAPEYVATGRLT-TKSDVYSFGVVLLELL 119
APE + R+ D+++ G +L ELL
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 257
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD---AEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 87
+ L +LH E+++I+RD K NI+L K+ D G AK G+ + T+ +G
Sbjct: 132 SSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVG 186
Query: 88 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
T Y APE + + T D +SFG + E ++G
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD---AEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 87
+ L +LH E+++I+RD K NI+L K+ D G AK G+ + T+ +G
Sbjct: 131 SSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVG 185
Query: 88 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
T Y APE + + T D +SFG + E ++G
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 42 SQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRTHVSTQVMGTHGYA 92
S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++ + T+ + T Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYVATRWYR 189
Query: 93 APEYVAT-GRLTTKSDVYSFGVVLLELLSGR 122
APE + T + + DV+S G +L EL R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G+L ++L Q ++ V + +A + + +L + I+R+ A N L+
Sbjct: 295 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENH 352
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
K++DFGL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 353 LVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ PY D +++ +++ + P+ L C
Sbjct: 412 ---------YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 454
Query: 180 NEPKLRPRMSEVLAILERL 198
P RP +E+ E +
Sbjct: 455 WNPSDRPSFAEIHQAFETM 473
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 42 SQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRTHVSTQVMGTHGYA 92
S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++ + T+ + T Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXVATRWYR 189
Query: 93 APEYVAT-GRLTTKSDVYSFGVVLLELLSGR 122
APE + T + + DV+S G +L EL R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 115 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 170
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 307
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 123
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 121 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWY 195
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 309
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 248
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T + T Y
Sbjct: 121 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 176
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 123
APE + + +T D++S G + E+++ R
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ ++ I+RD +A+N+L+ K++DFGLA+ + T
Sbjct: 119 AEGMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 175
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + G T KS+V+SFG++L E+++
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWY 195
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 248
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 119 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 85 VMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T + SD + FGV L E+ +
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 208
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 255
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 256 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 288
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEM---TGYVATRWY 195
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 194 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 294
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 149
+ APE + T +SDV+SFGV++ E+ + +G PY +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------LG--------GSPYPGIPVEE 267
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER-LEAPKNSAKLS 208
LF+++ P + + C + P RP +++ L+R L N L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 209 QSEPHRQ 215
S+P Q
Sbjct: 328 LSQPLEQ 334
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 302
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 211
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 258
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 259 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 291
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 207
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 254
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 255 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 287
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 190
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 237
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 238 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 116 QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 217
Query: 92 AAPEYVATG-RLTTKSDVYSFGVVLLELLSGR 122
APE + D++S G ++ ELL+GR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 116 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 300
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 149
+ APE + T +SDV+SFGV++ E+ + +G PY +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------LG--------GSPYPGIPVEE 267
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER-LEAPKNSAKLS 208
LF+++ P + + C + P RP +++ L+R L N L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 209 QSEPHRQ 215
S+P Q
Sbjct: 328 LSQPLEQ 334
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 116 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 115 QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWY 193
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 240
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 241 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 115 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 85 VMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T + SD + FGV L E+ +
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 115 QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 115 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 85 VMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T + SD + FGV L E+ +
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWY 199
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 246
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 247 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 279
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWY 193
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 240
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 241 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--G 90
G+ +L E ++R+ A N+LL AK+SDFGL+KA D ++ + + G
Sbjct: 448 GMKYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLK 504
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + + +++SDV+S+GV + E LS
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 207
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 113 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 198
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 63
G+ L +R P+ + K+ + K L +L + VI+RD K SNILLD K
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIK 165
Query: 64 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLEL 118
L DFG+ +G D + G Y APE + ++DV+S G+ L+EL
Sbjct: 166 LCDFGI--SGRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 119 LSGRCAVDKTKVGIE 133
+G+ K E
Sbjct: 223 ATGQFPYKNCKTDFE 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 193
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 200
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 247
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 248 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 135 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 187
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 115 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 200
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 247
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 248 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 118 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 173
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 125 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 85 VMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T + SD + FGV L E+ +
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 115 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 199
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 246
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 247 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 279
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
K+A+ K L LH S VI+RD K SN+L++A K+ DFG+ +G D
Sbjct: 113 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDID 169
Query: 85 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
G Y APE + + KSD++S G+ ++EL R D W
Sbjct: 170 A-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WG 217
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
P+ ++L ++++ K + QCL K RP E++
Sbjct: 218 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 119 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 85 VMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T + SD + FGV L E+ +
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 208
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 117 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 241
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 242 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 190
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 237
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 238 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 116 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 193
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGXVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 200
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 247
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 248 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 190
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 237
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 238 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AA G+ +L I+RD A N L+ + K+SDFG+++ G
Sbjct: 222 AAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + GR +++SDV+SFG++L E S +G A PY + +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS---------LG--------ASPYPNLSNQ 322
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 198
R K GG+ P A L QC EP RP S + L+ +
Sbjct: 323 QTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 195
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V T Y
Sbjct: 114 QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 92 AAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 122
APE + + +T D++S G + E+++ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 184
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D
Sbjct: 115 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND----DHX 168
Query: 85 VMGTH-----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
VM H + APE + T + SD + FGV L E+ +
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 184
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 185
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 185
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 134 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 186
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 233
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 234 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 266
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 184
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 253
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEM---TGYVATRWY 190
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 237
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 238 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 241
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 242 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AA G+ +L I+RD A N L+ + K+SDFG+++ G
Sbjct: 222 AAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
+ APE + GR +++SDV+SFG++L E S +G A PY + +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS---------LG--------ASPYPNLSNQ 322
Query: 150 LFRIMDTKLGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 198
R K GG+ P A L QC EP RP S + L+ +
Sbjct: 323 QTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAK--AGPTGDRTHVSTQVMGT 88
+GL +LHD +Q+++RD K N+L++ K+SDFG +K AG + GT
Sbjct: 133 EGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI----NPCTETFTGT 186
Query: 89 HGYAAPEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 146
Y APE + G +D++S G ++E+ +G+ + +P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP---- 231
Query: 147 KRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAK 206
+ +F++ K+ + P+ + A L+C +P R +++L E K S+K
Sbjct: 232 QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD----EFLKVSSK 287
Query: 207 LSQSEP 212
+++P
Sbjct: 288 KKKTQP 293
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 122 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 147
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 253
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 198
+ R + + P L C + EP RP SE++ L L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 121 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
+ A+ A+G+ +L + I+RD A N+LL K+ DFGL +A P D
Sbjct: 125 RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND----DHX 178
Query: 85 VMGTH-----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
VM H + APE + T + SD + FGV L E+ +
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LHD +++I+RD KA NIL + + KL+DFG++ A T +GT +
Sbjct: 120 ALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTXIQRRDSFIGTPYWM 176
Query: 93 APEYVATGR-----LTTKSDVYSFGVVLLEL 118
APE V K+DV+S G+ L+E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ +LH +++RD SN+LL N K++DFGLA H + + GT Y
Sbjct: 124 GMLYLH--SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKV 130
+PE +SDV+S G + LL GR D V
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVAT 205
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + ++ D++S G ++ ELL+GR
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ EL+ G C + + I+Q
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG-CVIFQGTDHIDQ 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 42 SQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRTHVSTQVMGTHGYA 92
S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++ + + + T Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFVATRWYR 189
Query: 93 APEYVAT-GRLTTKSDVYSFGVVLLELLSGR 122
APE + T + + DV+S G +L EL R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H + +++RD K NILL++ + + K+ DFGL+ + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTA 187
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H + +++RD K NILL++ + + K+ DFGL+ + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTA 187
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KG L ++L + LS K+ + + LH + +++RD K NILLD +
Sbjct: 93 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALH--KLNIVHRDLKPENILLDDDM 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR------LTTKSDVYSFGVV 114
N KL+DFG + G++ +V GT Y APE + + D++S GV+
Sbjct: 149 NIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 205
Query: 115 LLELLSG 121
+ LL+G
Sbjct: 206 MYTLLAG 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFG----LAKAGPTGDRTHVSTQVM 86
+GL +LHD +Q+++RD K N+L++ K+SDFG LA P +
Sbjct: 119 EGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC------TETFT 170
Query: 87 GTHGYAAPEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 144
GT Y APE + G +D++S G ++E+ +G+ + +P
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP-- 217
Query: 145 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 193
+ +F++ K+ + P+ + A L+C +P R +++L
Sbjct: 218 --QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 264
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 149 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KG L ++L + LS K+ + + LH + +++RD K NILLD +
Sbjct: 106 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALH--KLNIVHRDLKPENILLDDDM 161
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR------LTTKSDVYSFGVV 114
N KL+DFG + G++ +V GT Y APE + + D++S GV+
Sbjct: 162 NIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 115 LLELLSG 121
+ LL+G
Sbjct: 219 MYTLLAG 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGYVAT 208
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + ++ D++S G ++ ELL+GR
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + GT
Sbjct: 122 ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLD 175
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y PE + K D++S GV+ E L G
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVAT 185
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + ++ D++S G ++ ELL+GR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 144 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTA 198
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 199 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 28/186 (15%)
Query: 17 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 76
PL VR V I A G+ +L + I+RD A N +L + ++DFGL++ +G
Sbjct: 135 PLQTLVRFMVDI--ACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 77 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQS 135
D + A E +A T SDV++FGV + E+++ G+ GIE +
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ----TPYAGIENA 246
Query: 136 LVDWAKPYLSDKRKLFRIMDTKLGG---QYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
I + +GG + P + L QC + +PK RP + +
Sbjct: 247 ----------------EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290
Query: 193 AILERL 198
LE +
Sbjct: 291 MELENI 296
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVAT 185
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + ++ D++S G ++ ELL+GR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 34/177 (19%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
KGL ++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 155 KGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVT 204
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 147
Y APE + + ++ D++S G ++ E+L+G+ K YL
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-------------GKDYLDQL 251
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK-----LRPRMS-EVLAILERL 198
++ ++ G ++ QK AA +Q L P+ L PR S + +LE++
Sbjct: 252 TQILKVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 307
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H + +++RD K NILL++ + + K+ DFGL+ + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTA 187
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y +
Sbjct: 145 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + SD+++ G ++ +L++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y +
Sbjct: 148 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + SD+++ G ++ +L++G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ D+GLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVAT 181
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
Y APE + ++ D++S G ++ ELL+GR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 154 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 206 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + L +LH VI+RD K+ +ILL + KLSDFG A + D +
Sbjct: 146 VCEAVLQALAYLH--AQGVIHRDIKSDSILLTLDGRVKLSDFGFC-AQISKDVPK-RKXL 201
Query: 86 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ T+ D++S G++++E++ G
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 97
H + ++++RD K N+L++++ KL+DFGLA+A R++ T + T Y AP+ +
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVL 191
Query: 98 -ATGRLTTKSDVYSFGVVLLELLSGR 122
+ + +T D++S G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 97
H + ++++RD K N+L++++ KL+DFGLA+A R++ T + T Y AP+ +
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVL 191
Query: 98 -ATGRLTTKSDVYSFGVVLLELLSGR 122
+ + +T D++S G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 130 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 182 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGL + T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y +
Sbjct: 145 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + SD+++ G ++ +L++G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
+PE + SD+++ G ++ +L++G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 34/177 (19%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 88
KGL ++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 137 KGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVT 186
Query: 89 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 147
Y APE + + ++ D++S G ++ E+L+G+ K YL
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-------------GKDYLDQL 233
Query: 148 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK-----LRPRMS-EVLAILERL 198
++ ++ G ++ QK AA +Q L P+ L PR S + +LE++
Sbjct: 234 TQILKVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 289
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYR 185
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 193
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 137 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 191
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 149
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 116 LELLS 120
EL++
Sbjct: 210 WELMT 214
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 193
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 61
P G L H R L + ++ K + +L ++RD NIL+ +
Sbjct: 107 PYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPEC 163
Query: 62 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS- 120
KL DFGL++ D S + + +PE + R TT SDV+ F V + E+LS
Sbjct: 164 VKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSF 222
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ +P+ + + + +++ P TL +C +
Sbjct: 223 GK------------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWD 264
Query: 180 NEPKLRPRMSEVLAIL 195
+P RPR +E++ L
Sbjct: 265 YDPSDRPRFTELVCSL 280
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 149
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 116 LELLS 120
EL++
Sbjct: 210 WELMT 214
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 186
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 138 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTA 192
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 131 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 185
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 21 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 80
+V + + + A+ + FLH +++RD K SNI + K+ DFGL A +
Sbjct: 118 SVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 81 V----------STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 119
T +GT Y +PE + + K D++S G++L ELL
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 99 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 150
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 151 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 210
Query: 116 LELLS 120
EL++
Sbjct: 211 WELMT 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 61
P G L H R L + ++ K + +L ++RD NIL+ +
Sbjct: 95 PYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPEC 151
Query: 62 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS- 120
KL DFGL++ D S + + +PE + R TT SDV+ F V + E+LS
Sbjct: 152 VKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSF 210
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ +P+ + + + +++ P TL +C +
Sbjct: 211 GK------------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWD 252
Query: 180 NEPKLRPRMSEVLAIL 195
+P RPR +E++ L
Sbjct: 253 YDPSDRPRFTELVCSL 268
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 186
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 156
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 116 LELLS 120
EL++
Sbjct: 217 WELMT 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 61
P G L H R L + ++ K + +L ++RD NIL+ +
Sbjct: 91 PYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPEC 147
Query: 62 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS- 120
KL DFGL++ D S + + +PE + R TT SDV+ F V + E+LS
Sbjct: 148 VKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSF 206
Query: 121 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 179
G+ +P+ + + + +++ P TL +C +
Sbjct: 207 GK------------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWD 248
Query: 180 NEPKLRPRMSEVLAIL 195
+P RPR +E++ L
Sbjct: 249 YDPSDRPRFTELVCSL 264
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 149
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 116 LELLS 120
EL++
Sbjct: 210 WELMT 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHGY 91
L +LHD +++I+RD KA NIL + + KL+DFG+ AK T R +GT +
Sbjct: 147 ALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR---RDSFIGTPYW 201
Query: 92 AAPEYVATGR-----LTTKSDVYSFGVVLLEL 118
APE V K+DV+S G+ L+E+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 152
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 116 LELLS 120
EL++
Sbjct: 213 WELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 152
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 116 LELLS 120
EL++
Sbjct: 213 WELMT 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 172
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 233 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 274
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 275 YRIMTQCWQHQPEDRPNFA---IILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 172
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 233 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 274
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 275 YRIMTQCWQHQPEDRPNFA---IILERIE 300
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 124 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 156
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 116 LELLS 120
EL++
Sbjct: 217 WELMT 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 32 KGLTFLHDAESQ-VIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ----- 84
+ L+++H SQ +I+RD K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 85 ------VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 119
+GT Y A E + TG K D+YS G++ E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 123 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 121 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 151
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 152 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 116 LELLS 120
EL++
Sbjct: 212 WELMT 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 213 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 151
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 152 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 116 LELLS 120
EL++
Sbjct: 212 WELMT 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 44 VIYRDFKASNILL---DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++RD K N+L D E +SDFGL+K GD V + GT GY APE +A
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQK 197
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
+ D +S GV+ LL G
Sbjct: 198 PYSKAVDCWSIGVIAYILLCG 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ------ 84
+ L+++H +I+RD K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 85 -----VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 119
+GT Y A E + TG K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 46 YRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTK 105
+RD K NIL+ A+ A L DFG+A A T + V GT Y APE + T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 106 SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 142
+D+Y+ VL E L+G ++ + + ++ A P
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIP 252
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 142 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 199
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 200 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 259
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 260 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 301
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 302 YRIMTQCWQHQPEDRPNFA---IILERIE 327
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 156
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 116 LELLS 120
EL++
Sbjct: 217 WELMT 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 1 MPKGSLENHLF----RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
M G L +L GP+ + +K + A G+ +L + ++RD A N +L
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNRNFLHRDLAARNCML 180
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+ ++DFGL+K +GD + A E +A T+KSDV++FGV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 117 EL 118
E+
Sbjct: 241 EI 242
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 123 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + K++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIKVADFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 92 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 143
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 144 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203
Query: 116 LELLS 120
EL++
Sbjct: 204 WELMT 208
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 120 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 107 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 164
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 165 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 224
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 225 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 266
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 267 YRIMTQCWQHQPEDRPNFA---IILERIE 292
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK +
Sbjct: 120 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 104 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 155
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 156 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 215
Query: 116 LELLS 120
EL++
Sbjct: 216 WELMT 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 173
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 234 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 275
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 276 YRIMTQCWQHQPEDRPNFA---IILERIE 301
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 230
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + K++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIKVADFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 132 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 189
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 190 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 249
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 250 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 291
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 292 YRIMTQCWQHQPEDRPNFA---IILERIE 317
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 161 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTA 215
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 216 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 173
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 234 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 275
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 276 YRIMTQCWQHQPEDRPNFA---IILERIE 301
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M KG L ++L + LS K+ + + LH + +++RD K NILLD +
Sbjct: 106 MKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALH--KLNIVHRDLKPENILLDDDM 161
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR------LTTKSDVYSFGVV 114
N KL+DFG + G++ V GT Y APE + + D++S GV+
Sbjct: 162 NIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 115 LLELLSG 121
+ LL+G
Sbjct: 219 MYTLLAG 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 97
H + +IYRD K NI+L+ + + KL+DFGL K D T V+ GT Y APE +
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGTIEYMAPEIL 193
Query: 98 ATGRLTTKSDVYSFGVVLLELLSG 121
D +S G ++ ++L+G
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST-----Q 84
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ TH
Sbjct: 162 GITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKD 211
Query: 85 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 212 KIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 123 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 174
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 175 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 234
Query: 116 LELLS 120
EL++
Sbjct: 235 WELMT 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 187
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 248 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 289
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 290 YRIMTQCWQHQPEDRPNFA---IILERIE 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 176 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 230
Query: 93 APEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVDKTKVGIEQ 134
APE + D++S G ++ E L GR +D+ IEQ
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y
Sbjct: 112 GIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYR 167
Query: 93 APEYV-ATGRLTTKSDVYSFGVVLLELLSG 121
AP+ + + + +T D++S G + E+++G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 252 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 301
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 302 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 122 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 179
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 180 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 239
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 240 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 281
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 282 YRIMTQCWQHQPEDRPNFA---IILERIE 307
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 187
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 248 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 289
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 290 YRIMTQCWQHQPEDRPNFA---IILERIE 315
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLD 57
GSL + L R+ +P + +++A+ AA GL LH + + +RDFK+ N+L+
Sbjct: 91 GSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVK 147
Query: 58 AEFNAKLSDFGLAKAGPTG-DRTHVSTQ-VMGTHGYAAPEYVATGRLTTK-------SDV 108
+ ++D GLA G D + +GT Y APE V ++ T +D+
Sbjct: 148 SNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-VLDEQIRTDCFESYKWTDI 206
Query: 109 YSFGVVLLEL 118
++FG+VL E+
Sbjct: 207 WAFGLVLWEI 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG-PTGDRTHVSTQVMGTHGYAAPEY 96
H + +IYRD K NI+L+ + + KL+DFGL K G TH GT Y APE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEI 192
Query: 97 VATGRLTTKSDVYSFGVVLLELLSG 121
+ D +S G ++ ++L+G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 154 ARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 187
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 248 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 289
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 290 YRIMTQCWQHQPEDRPNFA---IILERIE 315
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 156 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 133 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 190
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 191 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 250
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 251 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 292
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 293 YRIMTQCWQHQPEDRPNFA---IILERIE 318
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 173
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 174 LTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 234 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 275
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 276 YRIMTQCWQHQPEDRPNFA---IILERIE 301
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 1 MPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
M G L++ L P+P L+ + VA A G +L E+ I+RD A N L
Sbjct: 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCL 213
Query: 56 LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 112
L AK+ DFG+A+ M + PE G T+K+D +SFG
Sbjct: 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 273
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTA 170
V+L E+ S +G PY S + T GG+ P+
Sbjct: 274 VLLWEIFS---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPV 315
Query: 171 ATLALQCLNNEPKLRPRMSEVLAILERLE 199
+ QC ++P+ RP + ILER+E
Sbjct: 316 YRIMTQCWQHQPEDRPNFA---IILERIE 341
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 159 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y
Sbjct: 112 GIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYR 167
Query: 93 APEYV-ATGRLTTKSDVYSFGVVLLELLSG 121
AP+ + + + +T D++S G + E+++G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 143 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 197
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVDKTKVGIEQ 134
APE + D++S G ++ E++ GR +D+ IEQ
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y
Sbjct: 112 GIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYR 167
Query: 93 APEYV-ATGRLTTKSDVYSFGVVLLELLSG 121
AP+ + + + +T D++S G + E+++G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 139 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 193
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + T + T Y
Sbjct: 136 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTPYVVTRYYR 190
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ EL+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 132 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYR 186
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVDKTKVGIEQ 134
APE + D++S G ++ E++ GR +D+ IEQ
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
+PL V GA +GL +LH +I+RD KA NILL KL DFG A
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLH--SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
Query: 76 GDRTHVSTQVMGTHGYAAPEYVAT---GRLTTKSDVYSFGVVLLEL 118
+ +GT + APE + G+ K DV+S G+ +EL
Sbjct: 207 AN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNIL---LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LHD +++RD K N+L LD + +SDFGL+K G V + GT
Sbjct: 128 AVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GY APE +A + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 34 LTFLHDAESQVIYRDFKASNIL---LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ +LHD +++RD K N+L LD + +SDFGL+K G V + GT G
Sbjct: 129 VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE +A + D +S GV+ LL G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH +V++RD K NIL+ + KL+DFGLA+ T V+ T Y
Sbjct: 131 RGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNIL---LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LHD +++RD K N+L LD + +SDFGL+K G V + GT
Sbjct: 128 AVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GY APE +A + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
+PL V GA +GL +LH +I+RD KA NILL KL DFG A
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLH--SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
Query: 76 GDRTHVSTQVMGTHGYAAPEYVAT---GRLTTKSDVYSFGVVLLEL 118
+ +GT + APE + G+ K DV+S G+ +EL
Sbjct: 168 AN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L++ + A AKG+ FL ++RD A N+L+ K+ DFGLA+ +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
V + APE + G T KSDV+S+G++L E+ S
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH +V++RD K NIL+ + KL+DFGLA+ T V+ T Y
Sbjct: 131 RGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ DF LA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 175 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 224
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 225 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPEVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LHD +++I+RD KA NIL + + KL+DFG++ + S +GT +
Sbjct: 147 ALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWM 202
Query: 93 APEYVATGR-----LTTKSDVYSFGVVLLEL 118
APE V K+DV+S G+ L+E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH + +++RD K NIL+ + KL+DFGLA+ T V+ T Y
Sbjct: 131 RGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTPVVVTLWY 185
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ FGLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNIL---LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LHD +++RD K N+L LD + +SDFGL+K G V + GT
Sbjct: 128 AVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTP 182
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GY APE +A + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH +V++RD K NIL+ + KL+DFGLA+ T V+ T Y
Sbjct: 131 RGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T+ H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 138 GITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX---KDKIGTA 192
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V G K DV+S GV+L LLSG
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 130 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 179
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 180 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L++ H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 122 ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLD 175
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y PE + K D++S GV+ E L G
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 132 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 181
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 182 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 10 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSD 66
+ R+ + AV MK + G T+LH + +++RD K N+LL+++ K+ D
Sbjct: 113 ILRQKFSEVDAAVIMKQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVD 167
Query: 67 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
FGL+ G + + +GT Y APE V + K DV+S GV+L LL G
Sbjct: 168 FGLSAHFEVGGKM---KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ A+G+ +L D ++++RD A N+L
Sbjct: 95 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYLED--RRLVHRDLAARNVL 146
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFGLAK ++ + + + A E + T +SDV+S+GV +
Sbjct: 147 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 206
Query: 116 LELLS 120
EL++
Sbjct: 207 WELMT 211
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KG+ +LH ++I+RD K SN+L+ + + K++DFG++ D +T +GT +
Sbjct: 148 KGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPAF 203
Query: 92 AAPEYVATGR--LTTKS-DVYSFGVVLLELLSGRC 123
APE ++ R + K+ DV++ GV L + G+C
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A+G+ +L A + I+RD A N+L+ +++DFGLA+ D +T
Sbjct: 167 ARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 1 MPKGSLENHLFRRGPQPLSWA----VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G L N L P WA + +A+ A + +H RD K N+LL
Sbjct: 157 MPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--------RDVKPDNMLL 207
Query: 57 DAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGYAAPEYVAT----GRLTTKSDVYSF 111
D + KL+DFG K TG H T V GT Y +PE + + G + D +S
Sbjct: 208 DKHGHLKLADFGTCMKMDETG-MVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSV 265
Query: 112 GVVLLELLSG 121
GV L E+L G
Sbjct: 266 GVFLFEMLVG 275
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNIL-LDAEFNAKL--SDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +++RD K N+L L E N+K+ +DFGL+K G + + GT
Sbjct: 118 AVKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTP 171
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GY APE +A + D +S GV+ LL G
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDA-EFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTH 89
G+T+LH + +++RD K N+LL++ E +A K+ DFGL+ + + +GT
Sbjct: 148 GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KERLGTA 202
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V + K DV+S GV+L LL+G
Sbjct: 203 YYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ T + + + T Y
Sbjct: 140 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMVPFVVTRYYR 194
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 25 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 84
K+A+ K L LH S VI+RD K SN+L++A K DFG+ +G D
Sbjct: 140 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGI--SGYLVDDVAKDID 196
Query: 85 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 140
G Y APE + + KSD++S G+ +EL R D W
Sbjct: 197 A-GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS-----------WG 244
Query: 141 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
P+ ++L ++++ K + QCL K RP E+
Sbjct: 245 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 10 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSD 66
+ R+ + AV MK + G T+LH + +++RD K N+LL+++ K+ D
Sbjct: 96 ILRQKFSEVDAAVIMKQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVD 150
Query: 67 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
FGL+ G + + +GT Y APE V + K DV+S GV+L LL G
Sbjct: 151 FGLSAHFEVGGKM---KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
L +LHD +++I+RD KA NIL + + KL+DFG++ +GT +
Sbjct: 147 ALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--XIQRRDXFIGTPYWM 202
Query: 93 APEYVATGR-----LTTKSDVYSFGVVLLEL 118
APE V K+DV+S G+ L+E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 175
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFGLAK RT + GT Y APE + + D ++ GV++ E
Sbjct: 176 QQGYIKVTDFGLAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 118 LLSG 121
+ +G
Sbjct: 231 MAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 22/117 (18%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT---------- 75
V K + +LH +++RD K SNILL+AE + K++DFGL+++
Sbjct: 114 VVYQLIKVIKYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 76 ---------GDRTHVSTQVMGTHGYAAPEY-VATGRLTTKSDVYSFGVVLLELLSGR 122
D + T + T Y APE + + + T D++S G +L E+L G+
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL ++H A +I+RD K N+ ++ + K+ DFGLA+ + V T+ Y
Sbjct: 139 KGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WY 191
Query: 92 AAPEYVATG-RLTTKSDVYSFGVVLLELLSGR 122
APE + R T D++S G ++ E+++G+
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + K++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIKVADFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 121 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 170
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 171 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHG 90
+ L FLH ++I+RD KA N+L+ E + +L+DFG+ AK T + +GT
Sbjct: 128 EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPY 182
Query: 91 YAAPEYVATGRLTT-----KSDVYSFGVVLLEL 118
+ APE V + K+D++S G+ L+E+
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL+GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 85
V + + L+ LH VI+RD K+ +ILL + KLSDFG VS +V
Sbjct: 125 VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEV 174
Query: 86 ------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT + APE ++ + D++S G++++E++ G
Sbjct: 175 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHG 90
+GL+ LH + +VI+RD K N+LL KL DFG+ A+ T R + +GT
Sbjct: 140 RGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPY 194
Query: 91 YAAPEYVATGR-----LTTKSDVYSFGVVLLELLSG 121
+ APE +A KSD++S G+ +E+ G
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ G + +V+ T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-TRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVDKTKVGIEQ 134
APE + D++S G ++ E++ GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
+G+ +LH ++ +++ D K NILL + + + K+ DFG+++ G + ++MGT
Sbjct: 142 EGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGT 196
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 143
Y APE + +TT +D+++ G++ LL+ +T + I Q VD+++
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 144 LSDKRKL 150
S +L
Sbjct: 257 FSSVSQL 263
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T D T + T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEM---TGYVATRWY 188
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 150
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 235
Query: 151 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 184
R++ T G + +K + +A +Q L PK+
Sbjct: 236 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 134 RGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 122
APE + ++ D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHG 90
+ L FLH ++I+RD KA N+L+ E + +L+DFG+ AK T + +GT
Sbjct: 120 EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPY 174
Query: 91 YAAPEYVATGRLTT-----KSDVYSFGVVLLEL 118
+ APE V + K+D++S G+ L+E+
Sbjct: 175 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+L+D
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLID 176
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 177 QQGYIKVADFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 118 LLSG 121
+ +G
Sbjct: 232 MAAG 235
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFG AK +
Sbjct: 122 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 1 MPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 55
MP G L +++ G Q L +W V++ AKG+ +L D ++++RD A N+L
Sbjct: 102 MPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVL 153
Query: 56 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+ + K++DFG AK ++ + + + A E + T +SDV+S+GV +
Sbjct: 154 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 213
Query: 116 LELLS 120
EL++
Sbjct: 214 WELMT 218
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFG AK +
Sbjct: 122 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL----AKAGPTGDRTHVSTQV 85
G+ +LH + +++RD K NILL+ + N K+ DFGL +K DR
Sbjct: 158 GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR------- 208
Query: 86 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+GT Y APE V + K DV+S GV++ LL G
Sbjct: 209 LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFG AK +
Sbjct: 127 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFG AK +
Sbjct: 122 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 18 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
L+W V++ AKG+ +L D ++++RD A N+L+ + K++DFG AK +
Sbjct: 120 LNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
Query: 78 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
+ + + + A E + T +SDV+S+GV + EL++
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 123
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 92 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 123
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR- 101
++I+RD K NILLD + ++DF +A P T ++T + GT Y APE ++ +
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPEMFSSRKG 191
Query: 102 --LTTKSDVYSFGVVLLELLSGR 122
+ D +S GV ELL GR
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 92
G+ LH A +I+RD K SNI++ ++ K+ DFGLA+ G + +V+ T Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-TRYYR 192
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVDKTKVGIEQ 134
APE + D++S G ++ E++ GR +D+ IEQ
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 175
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 176 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 118 LLSG 121
+ +G
Sbjct: 231 MAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 176
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 177 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 118 LLSG 121
+ +G
Sbjct: 232 MAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 176
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 177 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 118 LLSG 121
+ +G
Sbjct: 232 MAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 176
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 177 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 118 LLSG 121
+ +G
Sbjct: 232 MAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 175
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 176 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 118 LLSG 121
+ +G
Sbjct: 231 MAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 195
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 196 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 117 ELLSG 121
E+ +G
Sbjct: 251 EMAAG 255
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 176
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ K++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 177 QQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 118 LLSG 121
+ +G
Sbjct: 232 MAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 212 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 266
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 324
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 325 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 374
Query: 208 SQSE 211
+ E
Sbjct: 375 TPLE 378
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRTWT---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 175
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ +++DFGLAK RT + GT Y APE + + D ++ GV++ E
Sbjct: 176 QQGYIQVTDFGLAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 118 LLSG 121
+ +G
Sbjct: 231 MAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------- 85
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + T++ +
Sbjct: 141 GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 86 -------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 120
+ T Y APE + TKS D++S G + ELL+
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 116 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 167
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 168 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 117 ELLSG 121
E+ +G
Sbjct: 223 EMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 169 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 223
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 281
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 282 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 331
Query: 208 SQSE 211
+ E
Sbjct: 332 TPLE 335
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 167 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 221
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 279
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 329
Query: 208 SQSE 211
+ E
Sbjct: 330 TPLE 333
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 124 VPGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 175
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 176 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 117 ELLSG 121
E+ +G
Sbjct: 231 EMAAG 235
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 171 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 225
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 283
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 284 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 333
Query: 208 SQSE 211
+ E
Sbjct: 334 TPLE 337
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+ T Y
Sbjct: 123 RGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVVVTLWY 177
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 116 VPGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 167
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 168 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 117 ELLSG 121
E+ +G
Sbjct: 223 EMAAG 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
++ +HD V++RD K N+L E K+ DFG A+ P D + T H
Sbjct: 118 AVSHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLH 174
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 122
YAAPE + D++S GV+L +LSG+
Sbjct: 175 -YAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 174
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 175 DQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 117 ELLSG 121
E+ +G
Sbjct: 230 EMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 1 MPKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
+P G + +HL R G P +A ++ LTF + +IYRD K N+L+
Sbjct: 109 VPGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLLI 160
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
D + +++DFG AK RT + GT Y APE + + D ++ GV++
Sbjct: 161 DQQGYIQVTDFGFAKR--VKGRTWT---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 215
Query: 117 ELLSG 121
E+ +G
Sbjct: 216 EMAAG 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGT 88
+ L + HD + +I+RD K N+LL ++ N+ KL DFG+A G+ V+ +GT
Sbjct: 141 EALRYCHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGT 196
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V DV+ GV+L LLSG
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 141 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 195
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 253
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 254 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 303
Query: 208 SQSE 211
+ E
Sbjct: 304 TPLE 307
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 167 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 221
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 279
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 329
Query: 208 SQSE 211
+ E
Sbjct: 330 TPLE 333
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 32 KGLTFLHDAESQ-VIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ----- 84
+ L+++H SQ +I+R+ K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 85 ------VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 119
+GT Y A E + TG K D YS G++ E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM-GTHGYA 92
LTF + +IYRD K N+L+D + +++DFG AK R +T + GT Y
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYL 226
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + + D ++ GV++ E+ +G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 146 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 200
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 258
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 259 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 308
Query: 208 SQSE 211
+ E
Sbjct: 309 TPLE 312
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 188
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 246
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 247 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 296
Query: 208 SQSE 211
+ E
Sbjct: 297 TPLE 300
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 152 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 206
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 264
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 265 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 314
Query: 208 SQSE 211
+ E
Sbjct: 315 TPLE 318
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+ T Y
Sbjct: 123 RGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPVVVTLWY 177
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 161 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 215
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 273
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 274 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 323
Query: 208 SQSE 211
+ E
Sbjct: 324 TPLE 327
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Query: 13 RGPQPLS--WAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA 70
R P+ ++ + M +AI + L ++H RD K NIL+D + +L+DFG +
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFG-S 221
Query: 71 KAGPTGDRTHVSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSGR 122
D T S+ +GT Y +PE + GR + D +S GV + E+L G
Sbjct: 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 137 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 191
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 249
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 250 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 299
Query: 208 SQSE 211
+ E
Sbjct: 300 TPLE 303
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDA-EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
KGL FLH +I+RD K NI + + K+ D GLA T R + V+GT
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFAKAVIGTPE 195
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ APE + DVY+FG LE
Sbjct: 196 FXAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--A 72
P L + V K G+ F H +I+RD K NIL+ KL DFG A+ A
Sbjct: 118 PNGLDYQVVQKYLFQIINGIGFCH--SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
Query: 73 GPTGDRTHVSTQVMGTHGYAAPE-YVATGRLTTKSDVYSFGVVLLELLSGR------CAV 125
P V + T Y APE V + DV++ G ++ E+ G +
Sbjct: 176 AP----GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231
Query: 126 DKTKVGIEQSLVDWAKPY--LSDKRKLF---RIMDTK----LGGQYPQKAAHTAATLALQ 176
D+ I L + + L +K +F R+ + K L +YP K + LA +
Sbjct: 232 DQL-YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYP-KLSEVVIDLAKK 289
Query: 177 CLNNEPKLRPRMSEVL 192
CL+ +P RP +E+L
Sbjct: 290 CLHIDPDKRPFCAELL 305
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
MP GSL N L + + +K A+ A+G+ FLH E + + ++++D +
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM 150
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTK--------SDVYSFG 112
A++S + + + R + AP +VA L K +D++SF
Sbjct: 151 TARISMADVKFSFQSPGRMY------------APAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 113 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAAT 172
V+L EL++ E D LS+ ++ L P + +
Sbjct: 199 VLLWELVTR-----------EVPFAD-----LSNMEIGMKVALEGLRPTIPPGISPHVSK 242
Query: 173 LALQCLNNEPKLRPRMSEVLAILERLE 199
L C+N +P RP+ ++ ILE+++
Sbjct: 243 LMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 257
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 307
Query: 208 SQSE 211
+ E
Sbjct: 308 TPLE 311
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 257
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 307
Query: 208 SQSE 211
+ E
Sbjct: 308 TPLE 311
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 33 GLTFLHDAESQVIYRDFKASNILL-DAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTH 89
L + H V+++D K NIL D ++ K+ DFGLA+ + + ST GT
Sbjct: 136 ALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTA 190
Query: 90 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP-YLSDKR 148
Y APE V +T K D++S GVV+ LL+G T + Q + +P Y + R
Sbjct: 191 LYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR 249
Query: 149 KLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
L PQ A L Q L +P+ RP ++VL
Sbjct: 250 PL-----------TPQ-----AVDLLKQMLTKDPERRPSAAQVL 277
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 138 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 192
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 250
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 251 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 300
Query: 208 SQSE 211
+ E
Sbjct: 301 TPLE 304
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+ T Y
Sbjct: 123 RGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPVVVTLWY 177
Query: 92 AAPEYVATGRLTTKSDVYSFGVVLLELL 119
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ A KL DFGL++ ST + G + APE +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 184
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 225
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWA----VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G L N L P WA + +A+ A + F+H RD K N+LL
Sbjct: 151 MPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLL 201
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT----GRLTTKSDVYSFG 112
D + KL+DFG T V GT Y +PE + + G + D +S G
Sbjct: 202 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 113 VVLLELLSG 121
V L E+L G
Sbjct: 261 VFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWA----VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G L N L P WA + +A+ A + F+H RD K N+LL
Sbjct: 156 MPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLL 206
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT----GRLTTKSDVYSFG 112
D + KL+DFG T V GT Y +PE + + G + D +S G
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 113 VVLLELLSG 121
V L E+L G
Sbjct: 266 VFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 1 MPKGSLENHLFRRGPQPLSWA----VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 56
MP G L N L P WA + +A+ A + F+H RD K N+LL
Sbjct: 156 MPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLL 206
Query: 57 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT----GRLTTKSDVYSFG 112
D + KL+DFG T V GT Y +PE + + G + D +S G
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 113 VVLLELLSG 121
V L E+L G
Sbjct: 266 VFLYEMLVG 274
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 124 ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLD 177
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
Y PE + K D++ GV+ E L G D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFN-AKLSDFGLAKAGPTGDRTHVS--TQVMGTHGYAAP 94
H V++RD K NIL+D AKL DFG +G H T GT Y+ P
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDEPYTDFDGTRVYSPP 207
Query: 95 EYVATGRL-TTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 153
E+++ + + V+S G++L +++ G ++ + +E L
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL----------------- 250
Query: 154 MDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 192
+P + L +CL +P RP + E+L
Sbjct: 251 -------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 125 ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLD 178
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
Y PE + K D++ GV+ E L G D
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 124 ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLD 177
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 126
Y PE + K D++ GV+ E L G D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 23/156 (14%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
+ ++RD A N+L+ + KL DFGL++ S + + APE + R
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESINFRRF 189
Query: 103 TTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ- 161
T+ SDV+ FGV + E+ L+ KP+ K ++ G+
Sbjct: 190 TSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRIENGER 230
Query: 162 --YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
P T +L +C +P RPR +E+ A L
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 187
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 188 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 228
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 229 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ A KL DFGL++ ST + G + APE +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 564
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 565 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 605
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 193
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 227
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 207
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ +PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLXGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 150 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
R M+ +PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 208 SQSE 211
+ E
Sbjct: 296 TPLE 299
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 201
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 186
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 187 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 227
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 228 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 189
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 190 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 230
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 2 PKGSLENHLFRRG----PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 57
P G + +HL R G P +A ++ LTF + +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIV--------LTFEYLHSLDLIYRDLKPENLMID 175
Query: 58 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 117
+ +++DFG AK RT + GT Y APE + + D ++ GV++ E
Sbjct: 176 QQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 118 LLSG 121
+ +G
Sbjct: 231 MAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 184
Query: 98 ATGRLTTKSDVYSFGVVLLELL 119
R T+ SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 184
Query: 98 ATGRLTTKSDVYSFGVVLLELL 119
R T+ SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 212
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 213 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 253
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 254 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 181
Query: 98 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 157
R T+ SDV+ FGV + E+ L+ KP+ K ++
Sbjct: 182 NFRRFTSASDVWMFGVCMWEI-----------------LMHGVKPFQGVKNN--DVIGRI 222
Query: 158 LGGQ---YPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 195
G+ P T +L +C +P RPR +E+ A L
Sbjct: 223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM-GTHGYA 92
LTF + +IYRD K N+L+D + +++DFG AK R T + GT Y
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLAGTPEYL 205
Query: 93 APEYVATGRLTTKSDVYSFGVVLLELLSG 121
APE + + D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------- 85
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + H+ +
Sbjct: 143 GEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 86 ----------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 120
+ T Y APE + T S D++S G + ELL+
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+++D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAE-FNAKLSDFG---------LAKAGPTGDRT 79
A +GL +LH ++++ D KA N+LL ++ +A L DFG L K+ TGD
Sbjct: 194 ALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD-- 249
Query: 80 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ GT + APE V K DV+S ++L +L+G
Sbjct: 250 ----YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYV 97
+ ++RD A N+L+ + KL DFGL++ ST + G + APE +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAPESI 564
Query: 98 ATGRLTTKSDVYSFGVVLLELL 119
R T+ SDV+ FGV + E+L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+GL + H +V++RD K N+L++ KL+DFGLA+A +T+ + V T Y
Sbjct: 111 RGLAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWY 166
Query: 92 AAPEY-VATGRLTTKSDVYSFGVVLLELLSGR 122
P+ + + +T+ D++ G + E+ +GR
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL F H V++RD K N+L++ KL+DFGLA+A R + + V T Y
Sbjct: 112 KGLGFCH--SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWY 167
Query: 92 AAPEYVATGRL-TTKSDVYSFGVVLLEL 118
P+ + +L +T D++S G + EL
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 82
M +AI + L ++H RD K N+LLD + +L+DFG + D T S
Sbjct: 183 EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQS 233
Query: 83 TQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSGR 122
+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 234 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
+ L ++H + +RD K N+LLD KL DFG AK G+ + + +
Sbjct: 152 RSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRY 206
Query: 91 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 149
Y APE + TT D++S G V+ EL+ G+ + + GI+Q LV+ K + R+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQ-LVEIIKVLGTPSRE 264
Query: 150 LFRIMD-TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 207
+ M+ + ++PQ H + + RPR + + ++ RL SA+L
Sbjct: 265 QIKTMNPNYMEHKFPQIRPHPFSKV----------FRPRTPPDAIDLISRLLEYTPSARL 314
Query: 208 SQSE 211
+ E
Sbjct: 315 TAIE 318
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 82
M +AI + L ++H RD K N+LLD + +L+DFG + D T S
Sbjct: 199 EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQS 249
Query: 83 TQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSGR 122
+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 250 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 1 MPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
M GS+ +H+ RR L +V V A L FLH+ + +RD K NIL +
Sbjct: 93 MRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENILCEHP 147
Query: 60 FNA---KLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYVAT-----GRLTTKS 106
K+ DFGL GD + +ST + G+ Y APE V +
Sbjct: 148 NQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 107 DVYSFGVVLLELLS------GRCAVD 126
D++S GV+L LLS GRC D
Sbjct: 208 DLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 102
Q ++RD A N L++ + K+SDFGL++ + T ++ PE + +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMYSKF 198
Query: 103 TTKSDVYSFGVVLLELLS 120
++KSD+++FGV++ E+ S
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L N+L R +++ + + +L Q ++RD A N L++ +
Sbjct: 81 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQG 137
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFGL++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E
Sbjct: 138 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 118 LLS 120
+ S
Sbjct: 194 IYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L N+L R +++ + + +L Q ++RD A N L++ +
Sbjct: 85 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQG 141
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFGL++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E
Sbjct: 142 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 197
Query: 118 LLS 120
+ S
Sbjct: 198 IYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L N+L R +++ + + +L Q ++RD A N L++ +
Sbjct: 86 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFGL++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E
Sbjct: 143 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 118 LLS 120
+ S
Sbjct: 199 IYS 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L N+L R +++ + + +L Q ++RD A N L++ +
Sbjct: 86 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQG 142
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFGL++ D + S++ G+ ++ PE + + ++KSD+++FGV++ E
Sbjct: 143 VVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 118 LLS 120
+ S
Sbjct: 199 IYS 201
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAE-FNAKLSDFGLA---KAGPTGDRTHVSTQV 85
A +GL +LH ++++ D KA N+LL ++ +A L DFG A + G +
Sbjct: 175 ALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 86 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GT + APE V K DV+S ++L +L+G
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 43 QVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVAT 99
Q ++RD A N L++ + K+SDFGL++ D + S+ +G+ ++ PE +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMY 195
Query: 100 GRLTTKSDVYSFGVVLLELLS 120
+ ++KSD+++FGV++ E+ S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 155
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK + + T+ T Y APE + + D++S GV++ LL
Sbjct: 156 ILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 121 G 121
G
Sbjct: 213 G 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 60
M G L N+L R +++ + + +L Q ++RD A N L++ +
Sbjct: 92 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQG 148
Query: 61 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLE 117
K+SDFGL++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E
Sbjct: 149 VVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 204
Query: 118 LLS 120
+ S
Sbjct: 205 IYS 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
+ + F H + I+RD K NIL+ KL DFG A+ TG + +V T Y
Sbjct: 113 QAVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARL-LTGPSDYYDDEV-ATRWY 168
Query: 92 AAPE-YVATGRLTTKSDVYSFGVVLLELLSG 121
+PE V + DV++ G V ELLSG
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDFG---------LAKAGPTGDRT 79
A +GL +LH ++++ D KA N+LL ++ + A L DFG L K+ TGD
Sbjct: 175 ALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD-- 230
Query: 80 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ GT + APE V K D++S ++L +L+G
Sbjct: 231 ----YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 126 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 180
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 132 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 186
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 125 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 179
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDFG---------LAKAGPTGDRT 79
A +GL +LH ++++ D KA N+LL ++ + A L DFG L K+ TGD
Sbjct: 159 ALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD-- 214
Query: 80 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ GT + APE V K D++S ++L +L+G
Sbjct: 215 ----YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 126 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 180
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDFG---------LAKAGPTGDRT 79
A +GL +LH ++++ D KA N+LL ++ + A L DFG L K+ TGD
Sbjct: 173 ALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD-- 228
Query: 80 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ GT + APE V K D++S ++L +L+G
Sbjct: 229 ----YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 126 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 180
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 201
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 202 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258
Query: 121 G 121
G
Sbjct: 259 G 259
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-E 59
M G L + + RG Q + ++ + FLH + +RD K N+L + E
Sbjct: 89 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENLLYTSKE 146
Query: 60 FNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+A KL+DFG AK + T + Q T Y APE + + D++S GV++
Sbjct: 147 KDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 201
Query: 117 ELLSG 121
LL G
Sbjct: 202 ILLCG 206
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 157
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 158 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 121 G 121
G
Sbjct: 215 G 215
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 1 MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-E 59
M G L + + RG Q + ++ + FLH + +RD K N+L + E
Sbjct: 108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENLLYTSKE 165
Query: 60 FNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 116
+A KL+DFG AK + T + Q T Y APE + + D++S GV++
Sbjct: 166 KDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 220
Query: 117 ELLSG 121
LL G
Sbjct: 221 ILLCG 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
P + + D ++ GV++ E+ +G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 150 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 207
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 208 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 264
Query: 121 G 121
G
Sbjct: 265 G 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 155
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 156 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 121 G 121
G
Sbjct: 213 G 213
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 91
KGL F H V++RD K N+L++ KL++FGLA+A R + + V T Y
Sbjct: 112 KGLGFCH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWY 167
Query: 92 AAPEYVATGRL-TTKSDVYSFGVVLLEL 118
P+ + +L +T D++S G + EL
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 105 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 162
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 163 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 219
Query: 121 G 121
G
Sbjct: 220 G 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 104 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 161
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 162 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 218
Query: 121 G 121
G
Sbjct: 219 G 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 106 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 163
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 164 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 220
Query: 121 G 121
G
Sbjct: 221 G 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 157
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 158 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 121 G 121
G
Sbjct: 215 G 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 127 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 143
+ APE V L ++D++S GV+ LLSG +T I D+ + Y
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 241
Query: 144 LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 173
S+ +L + +L + P++ A +L
Sbjct: 242 FSNTSELAKDFIRRLLVKDPKRRMXIAQSL 271
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 99 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 156
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 157 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 213
Query: 121 G 121
G
Sbjct: 214 G 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 114 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 171
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D++S GV++ LL
Sbjct: 172 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 228
Query: 121 G 121
G
Sbjct: 229 G 229
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 251 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 305
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 37/199 (18%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 148
+ APE V L ++D++S GV+ LLSG A P+L D +
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGDTK 222
Query: 149 K--LFRI--MDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 204
+ L + ++ + +Y + A + L +PK R + I + L+ P
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR------MTIQDSLQHPWIK 276
Query: 205 AKLSQSEPHRQTGPVTVRK 223
K +Q R+ V + K
Sbjct: 277 PKDTQQALSRKASAVNMEK 295
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 26/113 (23%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAK---AGP 74
A G+ LH ++I+RD K NIL+ + F A +SDFGL K +G
Sbjct: 125 ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 75 TGDRTHVSTQVMGTHGYAAPEYVATG-------RLTTKSDVYSFGVVLLELLS 120
+ RT+++ GT G+ APE + RLT D++S G V +LS
Sbjct: 183 SSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 120 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 143
+ APE V L ++D++S GV+ LLSG +T I D+ + Y
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 234
Query: 144 LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 173
S+ +L + +L + P++ A +L
Sbjct: 235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 141 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 195
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 143
+ APE V L ++D++S GV+ LLSG +T I D+ + Y
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 255
Query: 144 LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 173
S+ +L + +L + P++ A +L
Sbjct: 256 FSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTH 89
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T + GT
Sbjct: 265 AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTP 319
Query: 90 GYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 121
Y APE V T D +S GV+L LSG
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 180
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 215
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 216 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 155
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 156 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 191
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 125 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 179
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 125 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 179
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 37 LHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LH + V++RD K N+LL ++ KL+DFGLA GD+ GT GY +
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLS 174
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + D+++ GV+L LL G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 86
+ + +LH E+ +++RD K N+L DA K++DFGL+K + + V
Sbjct: 159 EAVAYLH--ENGIVHRDLKPENLLYATPAPDAPL--KIADFGLSK---IVEHQVLMKTVC 211
Query: 87 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
GT GY APE + + D++S G++ LL G
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LTF + +IYRD K N+L+D + +++DFG AK RT + GT A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEALA 206
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + + D ++ GV++ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 33 GLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 88
G+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGT 180
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 25/146 (17%)
Query: 1 MPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 59
M GS+ +H+ RR L +V V A L FLH+ + +RD K NIL +
Sbjct: 93 MRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENILCEHP 147
Query: 60 FNA---KLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYVAT-----GRLTTKS 106
K+ DF L GD + +ST + G+ Y APE V +
Sbjct: 148 NQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 107 DVYSFGVVLLELLS------GRCAVD 126
D++S GV+L LLS GRC D
Sbjct: 208 DLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKAGPTGD 77
A G+ LH ++I+RD K NIL+ + F A +SDFGL K +G
Sbjct: 143 ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 78 ---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 120
R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 201 XXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKAGPTGD 77
A G+ LH ++I+RD K NIL+ + F A +SDFGL K +G
Sbjct: 143 ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 78 ---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 120
R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 201 XXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 202 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 257
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 258 --GIHE---DYQLPY 267
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 163 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 218
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 219 --GIHE---DYQLPY 228
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 104 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 163
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 164 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 219
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 220 --GIHE---DYQLPY 229
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 4 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF-NA 62
G L + + RG Q + ++ + + +LH + +RD K N+L ++ NA
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNA 201
Query: 63 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 120
KL+DFG AK T ++T T Y APE + + D +S GV+ LL
Sbjct: 202 ILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLC 258
Query: 121 G 121
G
Sbjct: 259 G 259
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 109 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 168
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 169 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 224
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 225 --GIHE---DYQLPY 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 188
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 189 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 244
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 245 --GIHE---DYQLPY 254
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA-------ESQVIYRDFKASNI 54
P GSL +L W ++A +GL +LH + + +RD + N+
Sbjct: 95 PNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 55 LLDAEFNAKLSDFGLA------KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-- 106
L+ + +SDFGL+ + G+ + + +GT Y APE V G + +
Sbjct: 152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXE 210
Query: 107 ------DVYSFGVVLLELLSGRC 123
D+Y+ G++ E+ RC
Sbjct: 211 SALKQVDMYALGLIYWEIFM-RC 232
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTG 76
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 106 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 165
Query: 77 DRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAVDKT 128
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 166 DTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG-- 221
Query: 129 KVGIEQSLVDWAKPY 143
GI + D+ PY
Sbjct: 222 --GIHE---DYQLPY 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGT 88
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+ +GT
Sbjct: 143 EALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 198
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V DV+ GV+L LLSG
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-------------GPTGDRT 79
G+ ++H A +++RD K +N L++ + + K+ DFGLA+ P D
Sbjct: 168 GVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 80 HVST---------QVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 120
++ T Q+ G T Y APE + T++ DV+S G + ELL+
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 227
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 32 KGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGT 88
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+ +GT
Sbjct: 141 EALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 196
Query: 89 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
+ APE V DV+ GV+L LLSG
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
A L + H +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 133 ADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLD 186
Query: 91 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
Y PE + K D++ GV+ ELL G
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 232
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 227
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 219
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 199
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 37 LHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LH + V++RD K N+LL ++ KL+DFGLA + GT GY +
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLS 192
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + D+++ GV+L LL G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 200
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 200
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 199
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 200
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 227
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 185
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 185
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 207
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 184
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 183
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 184
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 185
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE----FNAKLSDFGLAK-----AGPTGDRTHVST 83
G+ +LH + V++RD K +NIL+ E K++D G A+ P D
Sbjct: 140 GIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL----D 193
Query: 84 QVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 142
V+ T Y APE + R TK+ D+++ G + ELL+ + I+ S P
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS-----NP 248
Query: 143 YLSDK-RKLFRIM 154
Y D+ ++F +M
Sbjct: 249 YHHDQLDRIFNVM 261
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
G+++ H QV +RD K N LLD K++DFG +KA + +GT
Sbjct: 127 GVSYAH--AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPA 181
Query: 91 YAAPEYVATGRLTTK-SDVYSFGVVLLELLSG 121
Y APE + K +DV+S GV L +L G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 180
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 20/198 (10%)
Query: 2 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 61
P GSL N L + + +K A+ A+G FLH E + + ++ +D +
Sbjct: 92 PYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXT 151
Query: 62 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
A++S + + + R + V PE T R + +D +SF V+L EL++
Sbjct: 152 ARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNRRS--ADXWSFAVLLWELVTR 207
Query: 122 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 181
E D + + K L + T G P + L C N +
Sbjct: 208 -----------EVPFADLSNXEIGXKVALEGLRPTIPPGISPH-----VSKLXKICXNED 251
Query: 182 PKLRPRMSEVLAILERLE 199
P RP+ ++ ILE+ +
Sbjct: 252 PAKRPKFDXIVPILEKXQ 269
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG----LAKAGPTGDRTHVSTQVMGT 88
+++H+ E + +RD K SNIL+D KLSDFG + G R GT
Sbjct: 163 SFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--------GT 213
Query: 89 HGYAAPEYVATGRLTT--KSDVYSFGVVL 115
+ + PE+ + K D++S G+ L
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTHGY 91
GL LH E+ V++RD NILL + + DF LA+ ++TH T Y
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWY 199
Query: 92 AAPEYVATGRLTTK-SDVYSFGVVLLELLS 120
APE V + TK D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTHGY 91
GL LH E+ V++RD NILL + + DF LA+ ++TH T Y
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWY 199
Query: 92 AAPEYVATGRLTTK-SDVYSFGVVLLELLS 120
APE V + TK D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMG 87
A +GL +H E +++ D K NI+ + + + K+ DFGLA + V+T
Sbjct: 158 ACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---A 212
Query: 88 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
T +AAPE V + +D+++ GV+ LLSG
Sbjct: 213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 44 VIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++R+ K N+LL ++ KL+DFGLA + H GT GY +PE +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 205
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
+ D+++ GV+L LL G
Sbjct: 206 PYSKPVDIWACGVILYILLVG 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
G+++ H Q+ +RD K N LLD K+ DFG +K+ + +GT
Sbjct: 128 GVSYCHSM--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA 182
Query: 91 YAAPEYVATGRLTTK-SDVYSFGVVLLELLSG 121
Y APE + K +DV+S GV L +L G
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKAGPTGD 77
A G+ LH ++I+RD K NIL+ + F A +SDFGL K +G
Sbjct: 125 ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 78 ---RTHVSTQVMGTHGYAAPEYVATG-------RLTTKSDVYSFGVVLLELLS 120
R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 183 XXFRXNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 44 VIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++R+ K N+LL ++ KL+DFGLA + H GT GY +PE +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 182
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
+ D+++ GV+L LL G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 96
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 180
Query: 97 VATGRLTTKS-DVYSFGVVLLELLSG 121
+ R +S V+S G++L +++ G
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
G+++ H QV +RD K N LLD K+ DFG +K+ + +GT
Sbjct: 127 GVSYCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA 181
Query: 91 YAAPEYVATGRLTTK-SDVYSFGVVLLELLSG 121
Y APE + K +DV+S GV L +L G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 44 VIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++R+ K N+LL ++ KL+DFGLA + H GT GY +PE +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 182
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
+ D+++ GV+L LL G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 44 VIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++R+ K N+LL ++ KL+DFGLA + H GT GY +PE +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 181
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
+ D+++ GV+L LL G
Sbjct: 182 PYSKPVDIWACGVILYILLVG 202
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 34 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
L H +++ D K +NI L KL DFGL T V G Y A
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMA 224
Query: 94 PEYVATGRLTTKSDVYSFGVVLLEL 118
PE + G T +DV+S G+ +LE+
Sbjct: 225 PELL-QGSYGTAADVFSLGLTILEV 248
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 27/217 (12%)
Query: 26 VAIGAAKGLTFLHDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHV 81
V K + +LH V++RD K SNIL +D N ++ DFG AK + +
Sbjct: 121 VLFTITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 82 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 141
+ T + APE + D++S GV+L +L+G
Sbjct: 179 TP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN-------------G 223
Query: 142 PYLSDKRKLFRIMDTK--LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL---AILE 196
P + + L RI K L G Y + TA L + L+ +P R + VL I+
Sbjct: 224 PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283
Query: 197 RLEAPKNSAKLSQSEPHRQTGPVTVRKSPMRQQRSPL 233
+ P+ Q PH G + S + + +SP+
Sbjct: 284 WDQLPQYQLN-RQDAPHLVKGAMAATYSALNRNQSPV 319
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 33 GLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 90
G+++ H QV +RD K N LLD K+ DFG +K+ + +GT
Sbjct: 126 GVSYCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA 180
Query: 91 YAAPEYVATGRLTTK-SDVYSFGVVLLELLSG 121
Y APE + K +DV+S GV L +L G
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 38 HDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 94
H + +++RD K N+LL ++ KL+DFGLA + GT GY +P
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FAGTPGYLSP 202
Query: 95 EYVATGRLTTKSDVYSFGVVLLELLSG 121
E + D+++ GV+L LL G
Sbjct: 203 EVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMG 87
KGL +H E+ ++ D K NI+ + + KL DFGL V+T G
Sbjct: 264 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---G 318
Query: 88 THGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 121
T +AAPE VA G+ + +D++S GV+ LLSG
Sbjct: 319 TAEFAAPE-VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 30 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMG 87
KGL +H E+ ++ D K NI+ + + KL DFGL V+T G
Sbjct: 158 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---G 212
Query: 88 THGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 121
T +AAPE VA G+ + +D++S GV+ LLSG
Sbjct: 213 TAEFAAPE-VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 28/126 (22%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL-DAEFNA----------- 62
P PL M A L FLH E+Q+ + D K NIL ++EF
Sbjct: 119 PYPLPHVRHM--AYQLCHALRFLH--ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174
Query: 63 -------KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+++DFG A T D H +T ++ T Y PE + DV+S G +L
Sbjct: 175 SVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCIL 229
Query: 116 LELLSG 121
E G
Sbjct: 230 FEYYRG 235
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
Q S + K A + L LH ++++I+ D K NILL + + + +
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
R + Q + Y APE + R D++S G +L ELL+G
Sbjct: 253 HQRVYTXIQ---SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 28/126 (22%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL-DAEFNA----------- 62
P PL M A L FLH E+Q+ + D K NIL ++EF
Sbjct: 128 PYPLPHVRHM--AYQLCHALRFLH--ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 183
Query: 63 -------KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+++DFG A T D H +T ++ T Y PE + DV+S G +L
Sbjct: 184 SVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCIL 238
Query: 116 LELLSG 121
E G
Sbjct: 239 FEYYRG 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
Q S + K A + L LH ++++I+ D K NILL + + + +
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
R + Q + Y APE + R D++S G +L ELL+G
Sbjct: 253 HQRVYTXIQ---SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 37 LHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 93
LH + V++R+ K N+LL ++ KL+DFGLA + GT GY +
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLS 181
Query: 94 PEYVATGRLTTKSDVYSFGVVLLELLSG 121
PE + D+++ GV+L LL G
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 16 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 75
Q S + K A + L LH ++++I+ D K NILL + + + +
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252
Query: 76 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
R + Q + Y APE + R D++S G +L ELL+G
Sbjct: 253 HQRVYXXIQ---SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 28/126 (22%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL-DAEFNA----------- 62
P PL M A L FLH E+Q+ + D K NIL ++EF
Sbjct: 151 PYPLPHVRHM--AYQLCHALRFLH--ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 206
Query: 63 -------KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
+++DFG A T D H +T ++ T Y PE + DV+S G +L
Sbjct: 207 SVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCIL 261
Query: 116 LELLSG 121
E G
Sbjct: 262 FEYYRG 267
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 28/126 (22%)
Query: 15 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKLS------ 65
P P+ M A + + FLHD +++ + D K NIL D E L
Sbjct: 133 PYPIHQVRHM--AFQLCQAVKFLHD--NKLTHTDLKPENILFVNSDYELTYNLEKKRDER 188
Query: 66 ----------DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 115
DFG A T D H ST ++ T Y APE + + DV+S G ++
Sbjct: 189 SVKSTAVRVVDFGSA----TFDHEHHST-IVSTRHYRAPEVILELGWSQPCDVWSIGCII 243
Query: 116 LELLSG 121
E G
Sbjct: 244 FEYYVG 249
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 31 AKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 87
+G+ +H + +++ D K NIL DA+ K+ DFGLA+ ++ V+ G
Sbjct: 197 CEGIRHMH--QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FG 250
Query: 88 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 121
T + APE V ++ +D++S GV+ LLSG
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 44 VIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++RD K N+LL ++ KL+DFGLA GD+ GT GY +PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
D+++ GV+L LL G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 44 VIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 100
+++RD K N+LL ++ KL+DFGLA GD+ GT GY +PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 101 RLTTKSDVYSFGVVLLELLSG 121
D+++ GV+L LL G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 77
+K+A + GL LH + + +RD K+ NIL+ ++D GLA D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISD 195
Query: 78 RTHV----STQVMGTHGYAAPEYVATG------RLTTKSDVYSFGVVLLELLSGRCA--- 124
V +T+V GT Y PE + + +D+YSFG++L E ++ RC
Sbjct: 196 TNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGG 253
Query: 125 -VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK 183
V++ ++ LV + P D R++ I KL +P + + +CL K
Sbjct: 254 IVEEYQLPY-HDLVP-SDPSYEDMREIVCI--KKLRPSFPNRWSSD------ECLRQMGK 303
Query: 184 LRPRMSEVLAI-----LERLEAPKNSAKLSQSE 211
L M+E A L L K AK+S+S+
Sbjct: 304 L---MTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA--KAGPT 75
+++ + A GL LH + + +RD K+ NIL+ ++D GLA + T
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 76 GDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVYSFGVVLLEL 118
+ +GT Y APE V + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 24 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA--KAGPT 75
+++ + A GL LH + + +RD K+ NIL+ ++D GLA + T
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 76 GDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVYSFGVVLLEL 118
+ +GT Y APE V + D+++FG+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,122,192
Number of Sequences: 62578
Number of extensions: 263508
Number of successful extensions: 2545
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 696
Number of HSP's gapped (non-prelim): 1140
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)