BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025484
MDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEE
SEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEW
AKLRAATKSGFALTGVATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDP
TGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDG
ILEGTVKKQKHL

High Scoring Gene Products

Symbol, full name Information P value
AT1G54850 protein from Arabidopsis thaliana 3.6e-41
AT1G54840 protein from Arabidopsis thaliana 2.6e-31
AT1G20870 protein from Arabidopsis thaliana 5.7e-28
AT1G76440 protein from Arabidopsis thaliana 2.3e-23
MCA0982
Heat shock protein, Hsp20 family
protein from Methylococcus capsulatus str. Bath 0.00053

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025484
        (252 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010995 - symbol:AT1G54850 "AT1G54850" species...   437  3.6e-41   1
TAIR|locus:2010945 - symbol:AT1G54840 "AT1G54840" species...   344  2.6e-31   1
TAIR|locus:2037380 - symbol:AT1G20870 "AT1G20870" species...   313  5.7e-28   1
TAIR|locus:2011696 - symbol:AT1G76440 "AT1G76440" species...   269  2.3e-23   1
POMBASE|SPBC3E7.02c - symbol:hsp16 "heat shock protein Hs...   105  1.6e-05   1
UNIPROTKB|Q60A86 - symbol:MCA0982 "Heat shock protein, Hs...   105  0.00053   1


>TAIR|locus:2010995 [details] [associations]
            symbol:AT1G54850 "AT1G54850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] Pfam:PF00011 InterPro:IPR002068
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730 GO:GO:0006950
            PROSITE:PS01031 EMBL:BT002968 EMBL:BT004411 IPI:IPI00525916
            RefSeq:NP_175882.2 UniGene:At.37161 ProteinModelPortal:Q84K79
            SMR:Q84K79 PaxDb:Q84K79 PRIDE:Q84K79 EnsemblPlants:AT1G54850.1
            GeneID:841924 KEGG:ath:AT1G54850 TAIR:At1g54850 eggNOG:NOG319596
            HOGENOM:HOG000091018 InParanoid:Q84K79 OMA:PVTHASM PhylomeDB:Q84K79
            ProtClustDB:CLSN2680498 ArrayExpress:Q84K79 Genevestigator:Q84K79
            Uniprot:Q84K79
        Length = 206

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 81/144 (56%), Positives = 108/144 (75%)

Query:   105 GPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGPHVGKADVGESEDDYMFRIAL 164
             GPA IF+PS  + +E++ L + TK+G ALTG A +G++G  +G  D+ ESED Y FR+AL
Sbjct:    59 GPAMIFLPS-DSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVAL 117

Query:   165 PGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLP 224
             PGV RD+ EFSC ++P GKI+IKG TTTGE++V K +Q+F+M TQNL P G F+I   LP
Sbjct:   118 PGVSRDEKEFSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLP 177

Query:   225 GPVDPQQFSANFGFDGILEGTVKK 248
             GPV  ++F+ NFG DG+LEG VKK
Sbjct:   178 GPVSNEEFNGNFGSDGVLEGVVKK 201


>TAIR|locus:2010945 [details] [associations]
            symbol:AT1G54840 "AT1G54840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009408 "response
            to heat" evidence=RCA] [GO:0009644 "response to high light
            intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
            [GO:0048453 "sepal formation" evidence=RCA] InterPro:IPR002068
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
            PROSITE:PS01031 UniGene:At.10845 UniGene:At.48309 EMBL:AY093020
            EMBL:AY128943 IPI:IPI00531355 RefSeq:NP_175881.2
            ProteinModelPortal:Q8RWL4 IntAct:Q8RWL4 EnsemblPlants:AT1G54840.1
            GeneID:841923 KEGG:ath:AT1G54840 TAIR:At1g54840 eggNOG:NOG266122
            HOGENOM:HOG000091019 InParanoid:Q8RWL4 OMA:FSCEVED PhylomeDB:Q8RWL4
            ProtClustDB:CLSN2680496 ArrayExpress:Q8RWL4 Genevestigator:Q8RWL4
            Uniprot:Q8RWL4
        Length = 349

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 63/106 (59%), Positives = 80/106 (75%)

Query:   143 GPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQ 202
             G  VG  D+GE +D Y+FR++LPGVKRD+  FSC V+  GK+L++GVTTTG K V ++S 
Sbjct:   237 GLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVEDNGKVLVRGVTTTGGKRVKRYSH 296

Query:   203 VFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 248
             VFEMQT++L P G FS++  LPGPV P +FS NFG DGILEG V K
Sbjct:   297 VFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342


>TAIR|locus:2037380 [details] [associations]
            symbol:AT1G20870 "AT1G20870" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0006950 EMBL:AC007369 eggNOG:NOG266122 IPI:IPI00545650
            PIR:C86341 RefSeq:NP_173511.1 UniGene:At.51700
            ProteinModelPortal:Q9SYQ0 SMR:Q9SYQ0 PRIDE:Q9SYQ0
            EnsemblPlants:AT1G20870.1 GeneID:838680 KEGG:ath:AT1G20870
            TAIR:At1g20870 HOGENOM:HOG000153567 InParanoid:Q9SYQ0 OMA:FSCEIES
            PhylomeDB:Q9SYQ0 ProtClustDB:CLSN2914689 Genevestigator:Q9SYQ0
            Uniprot:Q9SYQ0
        Length = 463

 Score = 313 (115.2 bits), Expect = 5.7e-28, P = 5.7e-28
 Identities = 56/118 (47%), Positives = 81/118 (68%)

Query:   134 TGVATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTG 193
             TG A+   +G  VG  D+G ++  Y F++ALPGV++D  EFSC ++  GK++++G TT G
Sbjct:   345 TGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILEGSTTRG 404

Query:   194 EKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 251
             EK++ + S+VFEM  + L P GPF +  NLPGPVDP+ FS NF  DGI EG + + K+
Sbjct:   405 EKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVIIRHKN 462


>TAIR|locus:2011696 [details] [associations]
            symbol:AT1G76440 "AT1G76440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002068 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006950 PROSITE:PS01031
            EMBL:AC012394 EMBL:AC015450 EMBL:AY128378 EMBL:BT000371
            EMBL:AK317538 IPI:IPI00539280 PIR:B96792 RefSeq:NP_001031287.1
            RefSeq:NP_177770.1 RefSeq:NP_974155.1 UniGene:At.34653
            ProteinModelPortal:Q9S842 SMR:Q9S842 PRIDE:Q9S842 DNASU:843977
            EnsemblPlants:AT1G76440.1 EnsemblPlants:AT1G76440.2
            EnsemblPlants:AT1G76440.3 GeneID:843977 KEGG:ath:AT1G76440
            TAIR:At1g76440 eggNOG:NOG297869 HOGENOM:HOG000090358
            InParanoid:Q9S842 OMA:VQQLCPP PhylomeDB:Q9S842
            ProtClustDB:CLSN2682760 Genevestigator:Q9S842 Uniprot:Q9S842
        Length = 143

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 54/116 (46%), Positives = 74/116 (63%)

Query:   134 TGVATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTG 193
             TG A LG VGP +G  D+G SE  Y+FR++LPG++++ D+  C +   G++ I+GV    
Sbjct:    22 TGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVIP-- 79

Query:   194 EKSV-NKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 248
             E ++ +    ++ MQ Q L P GPFSIT NLPG VDP+ FS NF  DGI E  V K
Sbjct:    80 EIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135


>POMBASE|SPBC3E7.02c [details] [associations]
            symbol:hsp16 "heat shock protein Hsp16" species:4896
            "Schizosaccharomyces pombe" [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0009267 "cellular response to starvation" evidence=IEP]
            [GO:0031990 "mRNA export from nucleus in response to heat stress"
            evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
            evidence=IDA] [GO:0051082 "unfolded protein binding" evidence=IDA]
            [GO:0061077 "chaperone-mediated protein folding" evidence=NAS]
            PomBase:SPBC3E7.02c Pfam:PF00011 InterPro:IPR002068 GO:GO:0005829
            GO:GO:0005634 EMBL:CU329671 GO:GO:0051082 GenomeReviews:CU329671_GR
            eggNOG:COG0071 HOGENOM:HOG000251751 GO:GO:0009267
            InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031 GO:GO:0031990
            GO:GO:0034620 GO:GO:0061077 KO:K13993 EMBL:AB012619 EMBL:AJ003817
            PIR:T40376 RefSeq:NP_596091.1 ProteinModelPortal:O14368
            STRING:O14368 EnsemblFungi:SPBC3E7.02c.1 GeneID:2540977
            KEGG:spo:SPBC3E7.02c OMA:MQERMSR OrthoDB:EOG4JQ778 NextBio:20802092
            Uniprot:O14368
        Length = 143

 Score = 105 (42.0 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 33/109 (30%), Positives = 55/109 (50%)

Query:   140 GQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNK 199
             G++ P +   DV E +D     + LPGVK++D +     D +GK+ I G      K  N+
Sbjct:    33 GELSPSI---DVHEGKDTVSVDVELPGVKKEDVQVH--YD-SGKLTISGEVVNERK--NE 84

Query:   200 FSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 248
              ++  +  ++     G FS TI +P  +D  +  ANF  +G+L  T+ K
Sbjct:    85 STEGNQRWSERRF--GSFSRTITIPAKIDADRIEANFS-NGLLTVTLPK 130


>UNIPROTKB|Q60A86 [details] [associations]
            symbol:MCA0982 "Heat shock protein, Hsp20 family"
            species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
            "molecular_function" evidence=ND] Pfam:PF00011 InterPro:IPR002068
            GO:GO:0006950 HOGENOM:HOG000251751 InterPro:IPR008978
            SUPFAM:SSF49764 PROSITE:PS01031 EMBL:AE017282
            GenomeReviews:AE017282_GR KO:K13993 RefSeq:YP_113461.1
            ProteinModelPortal:Q60A86 GeneID:3103122 KEGG:mca:MCA0982
            PATRIC:22605764 OMA:KDIAITI ProtClustDB:CLSK751361 Uniprot:Q60A86
        Length = 176

 Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
 Identities = 40/129 (31%), Positives = 59/129 (45%)

Query:   120 WAKLRAATKSGFALTGVATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVD 179
             WA +R    S F  TG++     G  V K DV +  D+ + R  LPG+ +DD E + + D
Sbjct:    52 WALMRRPWPSLFR-TGLS-----GVRVPKVDVIDRADEVVVRAELPGITKDDLEVTLSED 105

Query:   180 PTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFD 239
                 +     ++  E    K  Q F  +       G FS ++ LP  VD  +  A+F  D
Sbjct:   106 ----MFTLQASSQSESKEEK-GQYFYREMSR----GEFSRSLRLPCAVDADKAKASFK-D 155

Query:   240 GILEGTVKK 248
             GILE  + K
Sbjct:   156 GILEVVIPK 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.132   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      252       240   0.00093  113 3  11 23  0.37    34
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  172 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.88u 0.08s 21.96t   Elapsed:  00:00:01
  Total cpu time:  21.88u 0.08s 21.96t   Elapsed:  00:00:01
  Start:  Fri May 10 10:44:25 2013   End:  Fri May 10 10:44:26 2013

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