BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025484
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4UJB1|HSPC4_RICFE Small heat shock protein C4 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1
Length = 163
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 148 KADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQ 207
+ D+ E+E +Y + LPGV +D+ +D I + E+S K + M+
Sbjct: 61 RTDITENESEYHLEVELPGVTQDN--IDLKIDSN----ILTIDGKKEQSTEKKDHNYHMK 114
Query: 208 TQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQ 249
+ G FS +I+LP VD + +ANF DGIL + K+
Sbjct: 115 ER---YYGSFSRSISLPSNVDEEHVTANFK-DGILSIKIPKK 152
>sp|O14368|HSP16_SCHPO Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hsp16 PE=2 SV=1
Length = 143
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 140 GQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNK 199
G++ P + DV E +D + LPGVK++D + +GK+ I G K+ +
Sbjct: 33 GELSPSI---DVHEGKDTVSVDVELPGVKKEDVQVHYD---SGKLTISGEVVNERKNEST 86
Query: 200 FSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 248
Q + G FS TI +P +D + ANF +G+L T+ K
Sbjct: 87 EGN----QRWSERRFGSFSRTITIPAKIDADRIEANFS-NGLLTVTLPK 130
>sp|O81822|HS177_ARATH 17.7 kDa class II heat shock protein OS=Arabidopsis thaliana
GN=HSP17.7 PE=2 SV=1
Length = 156
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 149 ADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQT 208
ADV E D Y+F + +PG+K DE ++ +++ G K N+ + M+
Sbjct: 48 ADVIEHPDAYVFAVDMPGIK--GDEIQVQIENENVLVVSGKRQRDNKE-NEGVKFVRMER 104
Query: 209 QNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTV 246
+ G F LP D ++ SA DG+L+ T+
Sbjct: 105 R----MGKFMRKFQLPDNADLEKISAACN-DGVLKVTI 137
>sp|O74984|HSP15_SCHPO Heat shock protein homolog C338.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC338.06c PE=3 SV=1
Length = 139
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 137 ATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKS 196
A L GP + ++ E+ED + +PG+ D+ + VD G L T +GE+
Sbjct: 27 AWLSCWGPAL---ELRETEDTIEVDVEVPGI----DKQNLKVDLHGSKL----TISGERK 75
Query: 197 VNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQ 249
+ + + + G FS TI LP PVD + A+ +GIL +KK+
Sbjct: 76 KPEEEKAGPLIRWSERCVGAFSRTITLPQPVDEKLIHASLN-NGILSIVMKKK 127
>sp|Q940Y3|ARID3_ARATH AT-rich interactive domain-containing protein 3 OS=Arabidopsis
thaliana GN=ARID3 PE=2 SV=1
Length = 786
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 138 TLGQVGPHVG--KADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEK 195
T+ VGP K +V ++D + +PG+ R+ E DP G+++I G E
Sbjct: 687 TVVDVGPPADWVKINVQRTQDCFEVYALVPGLVRE--EVRVQSDPAGRLVISG---EPEN 741
Query: 196 SVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGIL 242
+N + A PF ++LP +DP SA +G L
Sbjct: 742 PMNPWG------------ATPFKKVVSLPTRIDPHHTSAVVTLNGQL 776
>sp|O29119|PGK_ARCFU Phosphoglycerate kinase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pgk PE=3 SV=1
Length = 407
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 98 FEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGPHVGKAD 150
++++ +GPA +F R + + LRAAT++G+++ G + G +D
Sbjct: 317 YDYVVLNGPAGVFEDERFSLGTYEILRAATRAGYSVVGGGHIASAARLFGLSD 369
>sp|Q0WNR6|ARID5_ARATH AT-rich interactive domain-containing protein 5 OS=Arabidopsis
thaliana GN=ARID5 PE=2 SV=1
Length = 434
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 17/95 (17%)
Query: 148 KADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQ 207
K +V E++D + +PG+ R+ E DP G+++I G Q
Sbjct: 349 KINVRETKDCFEIFALVPGLLRE--EVRVQSDPAGRLVIAGQPE---------------Q 391
Query: 208 TQNLTPAGPFSITINLPGPVDPQQFSANFGFDGIL 242
N PF +N P +DP SA G L
Sbjct: 392 LDNPWGITPFKKVVNFPARIDPLHTSAVVSLHGRL 426
>sp|C3PGA0|ARC_CORA7 AAA ATPase forming ring-shaped complexes OS=Corynebacterium
aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)
GN=arc PE=3 SV=1
Length = 524
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 96 HGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLG 140
H + I A S ++P+ EWAK+ A T +G +TGV +G
Sbjct: 477 HLHQAIAAEQAESEYVPTSANPEEWAKIVAGTSAGAHVTGVELMG 521
>sp|P29830|HS176_ARATH 17.6 kDa class II heat shock protein OS=Arabidopsis thaliana
GN=HSP17.6 PE=2 SV=1
Length = 155
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 149 ADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQT 208
ADV E + Y F + +PG+K DE V+ +++ G E N+ + M+
Sbjct: 47 ADVIEHPNAYAFVVDMPGIK--GDEIKVQVENDNVLVVSG-ERQRENKENEGVKYVRMER 103
Query: 209 QNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVK 247
+ G F LP D + SA DG+L+ TV+
Sbjct: 104 R----MGKFMRKFQLPENADLDKISA-VCHDGVLKVTVQ 137
>sp|B1JHH1|MTOX_YERPY N-methyl-L-tryptophan oxidase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|Q669J9|MTOX_YERPS N-methyl-L-tryptophan oxidase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|A4TLT6|MTOX_YERPP N-methyl-L-tryptophan oxidase OS=Yersinia pestis (strain Pestoides
F) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|Q1CI06|MTOX_YERPN N-methyl-L-tryptophan oxidase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|A9R633|MTOX_YERPG N-methyl-L-tryptophan oxidase OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|P58526|MTOX_YERPE N-methyl-L-tryptophan oxidase OS=Yersinia pestis GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|B2K770|MTOX_YERPB N-methyl-L-tryptophan oxidase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|Q1C6L1|MTOX_YERPA N-methyl-L-tryptophan oxidase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
>sp|A7FH13|MTOX_YERP3 N-methyl-L-tryptophan oxidase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=solA PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 67 HDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGP-ASIFIPSRPT 116
+D+ ED+++ D LP E + VS HGF+F A G A++F +P+
Sbjct: 309 YDMSPDEDFII-DTLPEDERVMVVSGLSGHGFKFATALGEVAALFAQDKPS 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,646,382
Number of Sequences: 539616
Number of extensions: 4501012
Number of successful extensions: 9575
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 9549
Number of HSP's gapped (non-prelim): 75
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)