BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025485
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P45350|DRTS_DAUCA Bifunctional dihydrofolate reductase-thymidylate synthase OS=Daucus
carota PE=2 SV=1
Length = 528
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 155/184 (84%)
Query: 67 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
+R YQVVVAAT +MGIGKDGKLPW LPSD+KFFK +TM+TSDP KRNAV+MGRKTWESI
Sbjct: 21 QRTYQVVVAATQNMGIGKDGKLPWRLPSDMKFFKDVTMTTSDPLKRNAVIMGRKTWESIP 80
Query: 127 PLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQ 186
+RPLPGRLNVVLT SGSF+IA++ENV IC S+ ALELLA PYC S+EKVFVIGGGQ
Sbjct: 81 IQHRPLPGRLNVVLTRSGSFDIATVENVVICGSMISALELLAGSPYCVSVEKVFVIGGGQ 140
Query: 187 ILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVR 246
I REALNAP CDA+HIT+IE IECDTFIP +D S+FQ YSS PLVEN I++ F TYVR
Sbjct: 141 IYREALNAPGCDAVHITEIEEHIECDTFIPLLDESVFQPWYSSFPLVENKIRYCFTTYVR 200
Query: 247 VGNT 250
V N+
Sbjct: 201 VRNS 204
>sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Glycine max PE=1 SV=1
Length = 530
Score = 273 bits (699), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/185 (70%), Positives = 155/185 (83%)
Query: 67 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
+R YQVVVAAT D GIGKDGKLPW LP+DLKFFK++TM TS+PGK+NA+VMGRKTWESI
Sbjct: 24 QRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKTSEPGKKNAIVMGRKTWESIP 83
Query: 127 PLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQ 186
YRPL GRLNVVLT SGSF+IA+ ENV IC S+ ALELLA PY SIEKVFVIGGGQ
Sbjct: 84 LEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYSLSIEKVFVIGGGQ 143
Query: 187 ILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVR 246
I REALN P C+AIH+T+I++SIECDTF+P +D ++F+ YSS P VENNI++SF TYVR
Sbjct: 144 IFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPWYSSFPKVENNIRYSFTTYVR 203
Query: 247 VGNTS 251
V +++
Sbjct: 204 VRSSA 208
>sp|Q05762|DRTS1_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 1
OS=Arabidopsis thaliana GN=THY-1 PE=2 SV=2
Length = 519
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 158/197 (80%), Gaps = 2/197 (1%)
Query: 53 STLSNDNASMHLRA--RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPG 110
+T ND+ + L + +R YQVVVAAT +MGIGKDGKLPWNLP+DLKFFK +T++TSD
Sbjct: 3 TTTLNDSVTTTLASEPQRTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDITLTTSDSS 62
Query: 111 KRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEP 170
K+NAVVMGRKTWESI YRPL GRLNVVLT SG F+IA+ ENV C S+ AL+LLA P
Sbjct: 63 KKNAVVMGRKTWESIPIKYRPLSGRLNVVLTRSGGFDIANTENVVTCSSVDSALDLLAAP 122
Query: 171 PYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQ 230
PYC SIE+VFVIGGG ILREALN P CDAIH+T+I+TS++CDTFIPAID S++Q SS
Sbjct: 123 PYCLSIERVFVIGGGDILREALNRPSCDAIHLTEIDTSVDCDTFIPAIDTSVYQPWSSSF 182
Query: 231 PLVENNIQFSFVTYVRV 247
P+ EN ++F F T+VRV
Sbjct: 183 PVTENGLRFCFTTFVRV 199
>sp|O81395|DRTS_MAIZE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea
mays GN=DRTS PE=2 SV=1
Length = 521
Score = 271 bits (694), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 152/189 (80%)
Query: 59 NASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMG 118
N R +R YQVVVA T DMGIGKDG LPW LP DLKFFK+LT++TSDP K+NAV+MG
Sbjct: 7 NGDSQGRPQRNYQVVVAGTRDMGIGKDGVLPWKLPGDLKFFKELTLTTSDPVKKNAVIMG 66
Query: 119 RKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEK 178
RKTWESI RPLPGRLNV+LT SGSF+ A++ENV IC S+ ALELLA PYC SIEK
Sbjct: 67 RKTWESIPVKSRPLPGRLNVILTRSGSFDFATVENVVICGSMESALELLASTPYCLSIEK 126
Query: 179 VFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQ 238
VFVIGGGQ+LRE L P C+AIH+T I++SIECDTFIP +D S+FQ YSS P++E+NI+
Sbjct: 127 VFVIGGGQVLREYLKGPACEAIHLTDIQSSIECDTFIPPVDFSVFQPWYSSFPVIESNIR 186
Query: 239 FSFVTYVRV 247
SFV++VRV
Sbjct: 187 HSFVSFVRV 195
>sp|Q05763|DRTS2_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 2
OS=Arabidopsis thaliana GN=THY-2 PE=2 SV=2
Length = 565
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Query: 44 FYVGVNNNMSTLSNDNASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT 103
F V ++ +TL N N M + + YQVVVAAT +MGIGKDGKLPWNLP+DLKFFK LT
Sbjct: 41 FKVSISTMANTL-NGNVIMTSKPQSTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDLT 99
Query: 104 MSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLA 163
+STSD K+NAVVMGRKTWESI YRPL GRLNVVL+ S F+IA+ ENV C SI A
Sbjct: 100 LSTSDSAKKNAVVMGRKTWESIPKKYRPLSGRLNVVLSRSSGFDIANTENVVTCSSIDSA 159
Query: 164 LELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLF 223
L+LLA PP+ SIEKVFVIGGG ILREALN P C+AIHIT+I+TSI+CDTFIP +D S +
Sbjct: 160 LDLLAAPPFSLSIEKVFVIGGGDILREALNKPSCEAIHITEIDTSIDCDTFIPTVDTSAY 219
Query: 224 QQRYSSQPLVENNIQFSFVTYVRVGNTS 251
Q SS P+ EN ++FSF T+VRV ++S
Sbjct: 220 QPWCSSFPICENGLRFSFTTHVRVKSSS 247
>sp|Q2QRX6|DRTS_ORYSJ Putative bifunctional dihydrofolate reductase-thymidylate synthase
OS=Oryza sativa subsp. japonica GN=Os12g0446900 PE=3
SV=2
Length = 494
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/168 (68%), Positives = 140/168 (83%)
Query: 80 MGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVV 139
MGIGKDG LPW LP DLKFFK +T++TSDP K+NAVVMGRKTWESI +RPLPGRLNV+
Sbjct: 1 MGIGKDGTLPWKLPGDLKFFKDITVTTSDPSKKNAVVMGRKTWESIPLKFRPLPGRLNVI 60
Query: 140 LTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDA 199
LT SGSF+ A+ ENV IC S+ AL+LLA PYC ++EK F+IGGG+ILR++LNAP C+A
Sbjct: 61 LTRSGSFDFATAENVVICGSLDSALQLLATTPYCLTVEKTFIIGGGEILRQSLNAPACEA 120
Query: 200 IHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVRV 247
IH+T IE+SIECDTFIP IDLS+F YSS P+VEN I+ SF+++VRV
Sbjct: 121 IHLTDIESSIECDTFIPPIDLSMFHPWYSSFPVVENGIKHSFISFVRV 168
>sp|P28019|DYR_AEDAL Dihydrofolate reductase OS=Aedes albopictus GN=DHFR PE=3 SV=1
Length = 186
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 5/184 (2%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP 127
+ + ++VA + GIG G LPW L +LK+F ++T D GKRNA++MGRKT+ +
Sbjct: 2 KKFSLIVAVCANGGIGIKGDLPWRLRQELKYFSRMTKKIQDSGKRNAIIMGRKTYFGVPE 61
Query: 128 LYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 187
RPLP RLN++LT S N A V +C S+ AL+ L E P + IE V+++GG +
Sbjct: 62 SKRPLPERLNIILTRDPSAN-AYPSEVMVCTSMQEALKKLDEAPLVNEIENVWIVGGNAV 120
Query: 188 LREALNAPECDAIHITKIETSIECDTFIPAI--DLSLFQQRYSSQPLV--ENNIQFSFVT 243
+EA+ + C I++T+I+ + ECD F P I D L + + EN IQ+ +
Sbjct: 121 YKEAMQSDRCHRIYLTEIKETFECDAFFPEITSDFQLVKNDDDVPEDIQEENGIQYQYRI 180
Query: 244 YVRV 247
Y +V
Sbjct: 181 YEKV 184
>sp|Q93341|DYR_CAEEL Putative dihydrofolate reductase OS=Caenorhabditis elegans
GN=dhfr-1 PE=3 SV=1
Length = 189
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP 127
R ++VA + GIGK+G LPW + D+++F +T + SD KRNAV+MGRK WESI
Sbjct: 2 RKMNLIVAMDAEGGIGKNGVLPWRIKKDMQYFASVTKNVSDQSKRNAVLMGRKCWESIPV 61
Query: 128 LYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 187
RPL GRLN+VL S ++ + S+ A++LL+EPP+ SIE ++ IGG +I
Sbjct: 62 TRRPLAGRLNIVL--SRQLPAQKSDDYIVVNSLEAAMKLLSEPPFVDSIETIWNIGGAEI 119
Query: 188 LREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQ-------RYSSQPLVENNIQFS 240
AL D IH+T+I + E D + ++D S ++ +S+ EN ++F
Sbjct: 120 YDLALRENLVDEIHLTRIFKNFEADVHLKSLDFSKMEKVQNAEVSSENSEIFEENGLKFE 179
Query: 241 FVTYVRVGN 249
F + V N
Sbjct: 180 FCKWKVVEN 188
>sp|Q9U8B8|DYR_HELVI Dihydrofolate reductase OS=Heliothis virescens GN=DHFR PE=1 SV=1
Length = 185
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ AA +MGIG +G LPW L ++ +F +T S+P K NAV+MGR+TW+ I YRP
Sbjct: 8 LIAAACDNMGIGVNGALPWRLKKEMAYFTTMTSKVSEPTKVNAVIMGRRTWDCIPDKYRP 67
Query: 132 LPGRLNVVLTHS-GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILRE 190
L R+N+VLTH+ S E V + + A++ + IE +VIGG I R
Sbjct: 68 LQDRVNIVLTHNVDSVKENVPEGVMVFPGLDEAIKYIEGR---EDIESTWVIGGSSIYRA 124
Query: 191 ALNAPECDAIHITKIETSIECDTFIPAIDLSLF----QQRYSSQPLVENNIQFSFVTYVR 246
A+ P C I++T+I+ S +CDTF P ID F +++ + VE NI + F Y +
Sbjct: 125 AMTHPNCGKIYLTEIQKSFDCDTFFPNIDKQQFHLVDEEQIPGEKQVEGNISYYFRVYKK 184
Query: 247 V 247
+
Sbjct: 185 L 185
>sp|P17719|DYR_DROME Dihydrofolate reductase OS=Drosophila melanogaster GN=Dhfr PE=1
SV=3
Length = 182
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 10/177 (5%)
Query: 70 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLY 129
+ ++VA + GIG G LPW + S+LK+F + T TSDP K+NAVVMGRKT+ +
Sbjct: 4 FNLIVAVCENFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESK 63
Query: 130 RPLPGRLNVVLTHSGSFNIASL-ENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQIL 188
RPLP RLN+VL S + + L + V +C ++ A+++L E + +E ++++GG +
Sbjct: 64 RPLPDRLNIVL--STTLQESDLPKGVLLCPNLETAMKILEEQ---NEVENIWIVGGSGVY 118
Query: 189 REALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ-QRYSSQPL---VENNIQFSF 241
EA+ +P C ++ITKI +CDTF PAI S + S PL EN I+F +
Sbjct: 119 EEAMASPRCHRLYITKIMQKFDCDTFFPAIPDSFREVAPDSDMPLGVQEENGIKFEY 175
>sp|Q920D2|DYR_RAT Dihydrofolate reductase OS=Rattus norvegicus GN=Dhfr PE=2 SV=3
Length = 187
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 20/191 (10%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPLLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 127 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
RPL R+N+VL+ G+ +A +S+ AL+L+ +P S ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLIEQPELASKVDMVW 114
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ--QRYS---SQPLVEN 235
V+GG + +EA+N P + +T+I E DTF P IDL ++ Y S+ E
Sbjct: 115 VVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVLSEIQEEK 174
Query: 236 NIQFSFVTYVR 246
I++ F Y +
Sbjct: 175 GIKYKFEVYEK 185
>sp|P04753|DYR_MESAU Dihydrofolate reductase OS=Mesocricetus auratus GN=DHFR PE=2 SV=4
Length = 187
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
RP +VA + +MGIGK+G PW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDFPWPMLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 127 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
RPL R+N+VL+ G+ +A +S+ AL+L+ +P ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLIEQPELADKVDMVW 114
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ--QRYS---SQPLVEN 235
++GG + +EA+N P + +T+I E DTF P IDL ++ Y S+ E
Sbjct: 115 IVGGSSVYKEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVLSEVQEEK 174
Query: 236 NIQFSFVTYVRVG 248
I++ F Y + G
Sbjct: 175 GIKYKFEVYEKKG 187
>sp|P09503|DYR_SHV21 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
11) GN=DHFR PE=3 SV=1
Length = 187
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 19/161 (11%)
Query: 73 VVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+VA +MGIGK G LPW L +D K F+++T ++S P K+N V+MG+KTW SI RP
Sbjct: 8 IVAVAQNMGIGKQGNLPWPRLMNDFKHFQRMTTTSSVPDKQNLVIMGKKTWFSIPEKNRP 67
Query: 132 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 184
L GR+NVVL+ H F + +S+ AL+L +P + ++ V++IGG
Sbjct: 68 LKGRINVVLSKELKELPHRAHF---------LAKSLDDALKLTEQPELANKVDMVWIIGG 118
Query: 185 GQILREALNAPECD-AIHITKIETSIECDTFIPAIDLSLFQ 224
+ +EA++ P CD + +T+I ECDTF P DL ++
Sbjct: 119 SSVYKEAMSYP-CDLKLFVTRIMQDFECDTFFPEFDLEKYK 158
>sp|Q27793|DRTS_TRYCR Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma cruzi PE=1 SV=2
Length = 521
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 91/173 (52%), Gaps = 25/173 (14%)
Query: 66 ARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGR 119
A R + +VVA GIG +PWN+P D+KFF+ LT P KRNAVVMGR
Sbjct: 19 ALRAFSLVVAVDEHGGIGDGRSIPWNVPEDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGR 78
Query: 120 KTWESISPLYRPLPGRLNVVLTHS-------------GSFNIASLENVEICRSIHLALEL 166
KTW+SI P +RPLPGRLNVVL+ + N+ + V + + AL L
Sbjct: 79 KTWDSIPPKFRPLPGRLNVVLSSTLTTQHLLDGLPDEEKRNLHADSIVAVNGGLEQALRL 138
Query: 167 LAEPPYCSSIEKVFVIGGGQILREALNAPEC----DAIHITKIETS-IECDTF 214
LA P Y SIE V+ IGGG + EAL P C AI+ T I S C F
Sbjct: 139 LASPNYTPSIETVYCIGGGSVYAEALRPP-CVHLLQAIYRTTIRASESSCSVF 190
>sp|P00375|DYR_MOUSE Dihydrofolate reductase OS=Mus musculus GN=Dhfr PE=1 SV=3
Length = 187
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 20/191 (10%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 127 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
RPL R+N+VL+ G+ +A +S+ AL L+ +P S ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPRGAHFLA--------KSLDDALRLIEQPELASKVDMVW 114
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ--QRYS---SQPLVEN 235
++GG + +EA+N P + +T+I E DTF P IDL ++ Y S+ E
Sbjct: 115 IVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEK 174
Query: 236 NIQFSFVTYVR 246
I++ F Y +
Sbjct: 175 GIKYKFEVYEK 185
>sp|P00376|DYR_BOVIN Dihydrofolate reductase OS=Bos taurus GN=DHFR PE=1 SV=3
Length = 187
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 20/191 (10%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
RP +VA + +MGIGK+G LPW L ++ ++F+++T +S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIP 62
Query: 127 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
RPL R+N+VL+ G+ +A +S+ ALEL+ +P + ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPKGAHFLA--------KSLDDALELIEDPELTNKVDVVW 114
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ--QRYSSQPL---VEN 235
++GG + +EA+N P + +T+I E D F P ID ++ Y PL E
Sbjct: 115 IVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEK 174
Query: 236 NIQFSFVTYVR 246
I++ F Y +
Sbjct: 175 GIKYKFEVYEK 185
>sp|P16126|DRTS_LEIAM Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania amazonensis PE=3 SV=1
Length = 520
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 105/207 (50%), Gaps = 32/207 (15%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 122
R + +VVA GIG +PW +P D+ FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVALDKQHGIGDGESIPWRVPEDMAFFKDQTTLLRNKKPPTDKKRNAVVMGRKTW 84
Query: 123 ESISPLYRPLPGRLNVVLTHSGSFN------------IASLENVEICRSIHLALELLAEP 170
ES+ +RPL GRLNVVL+ + A+ + V + + A+ LLA P
Sbjct: 85 ESVPVKFRPLKGRLNVVLSSKATVEELLAPLPEEKRAAAAQDIVVVNGGLAAAVRLLARP 144
Query: 171 PYCSSIEKVFVIGGGQILREALNAP---ECDAIHITKIETSI-ECDTFIP--------AI 218
PYCSSIE + +GG Q+ +A+ +P + +++T+I T+ C F P A
Sbjct: 145 PYCSSIETAYCVGGAQVYADAMLSPCVEKLQEVYLTRIHTTAPACTRFFPFPPENAATAW 204
Query: 219 DLSLFQQRYSSQPLVENNIQFSFVTYV 245
DL+ Q R S + ++F YV
Sbjct: 205 DLASSQGRRKS---AVDGLEFEICKYV 228
>sp|P00377|DYR_PIG Dihydrofolate reductase OS=Sus scrofa GN=DHFR PE=1 SV=1
Length = 186
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 20/191 (10%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 2 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEYKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 61
Query: 127 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
RPL R+N+VL+ G+ +A +S+ AL+L +P ++ V+
Sbjct: 62 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLTEQPELKDKVDMVW 113
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ-----QRYSSQPLVEN 235
++GG + +EA+N P + +T+I E DTF P IDL ++ S E
Sbjct: 114 IVGGSSVYKEAMNKPGHIRLFVTRIMKEFESDTFFPEIDLEKYKLLSECSGVPSDVQEEK 173
Query: 236 NIQFSFVTYVR 246
I++ F Y +
Sbjct: 174 GIKYKFEVYEK 184
>sp|P22906|DYR_CANAX Dihydrofolate reductase OS=Candida albicans GN=DFR1 PE=1 SV=4
Length = 192
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+V A +GIG GK+PW L ++++FK +T T+ P RNAV+MGRKTWESI +RP
Sbjct: 9 IVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRP 68
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LP RLN++L+ S I +N+ SI +L L+ S +E+VF+IGG +I E
Sbjct: 69 LPDRLNIILSRSYENKIID-DNIIHASSIESSLNLV------SDVERVFIIGGAEIYNEL 121
Query: 192 LNAPECDAIHITKIE----TSIECDTFI----------PAIDLSLFQQRYSSQPLVENNI 237
+N + IT+IE SIE DTF+ P +L Q++ ++E++I
Sbjct: 122 INNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSEL----QKFVGDTVLEDDI 177
Query: 238 QFSFVTY 244
+ TY
Sbjct: 178 KEGDFTY 184
>sp|Q27783|DRTS_TRYBB Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma brucei brucei PE=1 SV=1
Length = 527
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 27/176 (15%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGRKT 121
RP+ VVVA+ GIG G +PW +P D+++F+++T + P KRNAVVMGRKT
Sbjct: 27 RPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKT 86
Query: 122 WESISPLYRPLPGRLNVVLTHSGSFNI-------------ASLENVEICRSIHLALELLA 168
W+S+ P +RPL RLNVVL+ S + A+ + V + + AL +L
Sbjct: 87 WDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLV 146
Query: 169 EPPYCSSIEKVFVIGGGQILREALNAPEC----DAIHITKIE-TSIECDTF--IPA 217
+ SSIE VF IGGG I ++AL AP C AIH T + S C F IPA
Sbjct: 147 SKEHTSSIETVFCIGGGTIYKQALCAP-CVNVLQAIHRTVVRPASNSCSVFFDIPA 201
>sp|P00374|DYR_HUMAN Dihydrofolate reductase OS=Homo sapiens GN=DHFR PE=1 SV=2
Length = 187
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 73 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+VA + +MGIGK+G LPW L ++ ++F+++T ++S GK+N V+MG+KTW SI RP
Sbjct: 8 IVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRP 67
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
L GR+N+VL+ + RS+ AL+L +P + ++ V+++GG + +EA
Sbjct: 68 LKGRINLVLSR--ELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEA 125
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQ 224
+N P + +T+I E DTF P IDL ++
Sbjct: 126 MNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYK 158
>sp|P00378|DYR_CHICK Dihydrofolate reductase OS=Gallus gallus GN=DHFR PE=1 SV=1
Length = 189
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 126
R +VA +MGIGKDG LPW L ++ K+F+++T ++ GK+NAV+MG+KTW SI
Sbjct: 2 RSLNSIVAVCQNMGIGKDGNLPWPPLRNEYKYFQRMTSTSHVEGKQNAVIMGKKTWFSIP 61
Query: 127 PLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQ 186
RPL R+N+VL S A + +S+ AL LL P S ++ V+++GG
Sbjct: 62 EKNRPLKDRINIVL--SRELKEAPKGAHYLSKSLDDALALLDSPELKSKVDMVWIVGGTA 119
Query: 187 ILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ--QRYSSQPL---VENNIQFSF 241
+ + A+ P + +T+I E DTF P ID F+ Y P E+ IQ+ F
Sbjct: 120 VYKAAMEKPINHRLFVTRILHEFESDTFFPEIDYKDFKLLTEYPGVPADIQEEDGIQYKF 179
Query: 242 VTYVR 246
Y +
Sbjct: 180 EVYQK 184
>sp|Q23695|DRTS_CRIFA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Crithidia fasciculata PE=3 SV=1
Length = 515
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 122
R + +VVAA GIG +PW +P L FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVAADQQHGIGDGETIPWTVPETLAFFKDQTTLLRNKKPPTEKKRNAVVMGRKTW 84
Query: 123 ESISPL-YRPLPGRLNVVLTHSGSFN-----------IASLENVEICRSIHLALELLAEP 170
E PL +RPL GRLNVVL+ + A+ +V I + AL LLA P
Sbjct: 85 EV--PLKFRPLKGRLNVVLSCRRPVDDLLAQLPEEKRAAAAADVVINGGLKEALHLLARP 142
Query: 171 PYCSSIEKVFVIGGGQILREALNAP---ECDAIHITKIETSIECDTF 214
PYCSSIE + IGG ++ EA+ +P + +++T++ T+ C+ F
Sbjct: 143 PYCSSIETAYCIGGARVYTEAMQSPCVEKLKEVYLTRVHTAPTCNRF 189
>sp|P07807|DYR_YEAST Dihydrofolate reductase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DFR1 PE=1 SV=2
Length = 211
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 98/166 (59%), Gaps = 9/166 (5%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+V +MGIG G LPW LPS++K+F+Q+T T DP K+NA++MGRKTWESI P +RP
Sbjct: 11 IVACLQPEMGIGFRGGLPWRLPSEMKYFRQVTSLTKDPNKKNALIMGRKTWESIPPKFRP 70
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELL-AEPPYCSSIEKVFVIGGGQILRE 190
LP R+NV+++ S + + I +S LA ++ E + +E+++VIGGG++ +
Sbjct: 71 LPNRMNVIISRSFKDDFVHDKERSIVQSNSLANAIMNLESNFKEHLERIYVIGGGEVYSQ 130
Query: 191 ALNAPECDAIHITKI-----ETSIECDTFIPAIDL-SLFQQRYSSQ 230
+ D ITKI + DTF+ A L +F ++ +Q
Sbjct: 131 IFSI--TDHWLITKINPLDKNATPAMDTFLDAKKLEEVFSEQDPAQ 174
>sp|P22573|DYR_SHV2C Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
488) GN=DHFR PE=3 SV=1
Length = 213
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 23/191 (12%)
Query: 73 VVAATHDMGIGKDGKLPWNLP-SDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+VA +MGIGK G LPW L +D K+F+++T S S K+N V+MG+ TW SI RP
Sbjct: 8 IVAVDQNMGIGKKGHLPWPLLINDFKYFQRMTTS-SVKNKQNLVIMGKNTWFSIPEKNRP 66
Query: 132 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 184
L R+N+VL+ H F + RS++ AL+L+ +P + +++V++IGG
Sbjct: 67 LKDRINLVLSKKLKEIPHGAHF---------LARSLNDALKLIEQPELVNKVDRVWIIGG 117
Query: 185 GQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQ--RYSSQP---LVENNIQF 239
+ ++A+N + +T+I S E DTF P IDL ++ Y P E I++
Sbjct: 118 SSVYKDAMNYSSHLKLFVTRIMQSFETDTFFPEIDLKNYKLLIEYPGVPSNTQEEKGIKY 177
Query: 240 SFVTYVRVGNT 250
F Y ++ NT
Sbjct: 178 KFEVYEKIVNT 188
>sp|P27421|DYR_SHV24 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
484-77) GN=DHFR PE=3 SV=1
Length = 186
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 98/170 (57%), Gaps = 24/170 (14%)
Query: 73 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+VA +MGIGK+G LPW L +D K+F+++T S S K+N V+MG+ TW SI RP
Sbjct: 8 IVAVDQNMGIGKNGYLPWPLLTNDFKYFQRMTTS-SVKNKQNLVIMGKNTWFSIPEKNRP 66
Query: 132 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 184
L R+N+VL+ H F + RS++ AL+L+ +P + + ++ V++IGG
Sbjct: 67 LKDRINLVLSKKLKEIPHGAHF---------LARSLNDALKLIEQPEFVNKVDMVWIIGG 117
Query: 185 GQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVE 234
+ ++A+N + +T+I S E DTF P IDL + +PL+E
Sbjct: 118 SSVYKDAMNYSSHLKLFVTRIMQSFETDTFFPEIDLKKY------KPLIE 161
>sp|P16184|DYR_PNECA Dihydrofolate reductase OS=Pneumocystis carinii PE=1 SV=1
Length = 206
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 64 LRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDPGKR-NAVVMGRK 120
+ ++ ++VA T GIG+ LPW L ++ +FK++T + T D + N V+MGRK
Sbjct: 1 MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRK 60
Query: 121 TWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSS---IE 177
TWESI +RPL GR+NVV+T + S ++ + + +S+ ALELL S I
Sbjct: 61 TWESIPLQFRPLKGRINVVITRNESLDLGN--GIHSAKSLDHALELLYRTYGSESSVQIN 118
Query: 178 KVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIP 216
++FVIGG Q+ + A++ P+ D I T I I CD F P
Sbjct: 119 RIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFP 157
>sp|P07382|DRTS_LEIMA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania major GN=LmjF06.0860 PE=1 SV=1
Length = 520
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 103/207 (49%), Gaps = 32/207 (15%)
Query: 68 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 122
R + +VVA GIG +PW +P D+ FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVALDMQHGIGDGESIPWRVPEDMTFFKNQTTLLRNKKPPTEKKRNAVVMGRKTW 84
Query: 123 ESISPLYRPLPGRLNVVLTHSGSFN--IASLENVEICR----------SIHLALELLAEP 170
ES+ +RPL GRLN+VL+ + +A L + + AL LLA P
Sbjct: 85 ESVPVKFRPLKGRLNIVLSSKATVEELLAPLPEGQRAAAAQDVVVVNGGLAEALRLLARP 144
Query: 171 PYCSSIEKVFVIGGGQILREALNAP---ECDAIHITKI-ETSIECDTFIP--------AI 218
YCSSIE + +GG Q+ +A+ +P + +++T+I T+ C F P A
Sbjct: 145 LYCSSIETAYCVGGAQVYADAMLSPCIEKLQEVYLTRIYATAPACTRFFPFPPENAATAW 204
Query: 219 DLSLFQQRYSSQPLVENNIQFSFVTYV 245
DL+ Q R S+ ++F YV
Sbjct: 205 DLASSQGRRKSE---AEGLEFEICKYV 228
>sp|Q27828|DRTS_PARTE Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Paramecium tetraurelia GN=GSPATT00019973001 PE=3 SV=1
Length = 462
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 18/178 (10%)
Query: 64 LRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWE 123
+ + + +V+A T + GIG +LPW L DL+ FK++T V+MGRKT+E
Sbjct: 1 MTTNKTFSMVLAMTLNGGIGYQNRLPWKLKEDLQRFKKITTG-------GIVIMGRKTFE 53
Query: 124 SISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIG 183
S++ +PLP R+NVV+ S N+ S V++ I AL+ Y +S +K+++IG
Sbjct: 54 SMNS--KPLPNRVNVVI----SKNMKSSNEVQVFPRIEDALQF-----YNTSHQKLYLIG 102
Query: 184 GGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSF 241
G +I E L +C +H+T+I +CD ++ S FQ +SQ EN I + +
Sbjct: 103 GKRIFEEGLATDKCSDVHLTRIGVETKCDVYLNKNIFSTFQVNKTSQTKSENGINYDY 160
>sp|P04174|DYR_NEIGO Dihydrofolate reductase OS=Neisseria gonorrhoeae GN=folA PE=1 SV=1
Length = 162
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 21/175 (12%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A ++ IG +PW++P D FFK T+ V+MGRKTWES+ +P
Sbjct: 6 IIAACAENLCIGAGNAMPWHIPEDFAFFKVYTLG-------KPVIMGRKTWESLP--VKP 56
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N+V++ + A E V S+ +AL L C+ E+ ++GG QI +A
Sbjct: 57 LPGRRNIVISRQADYCAAGAETVA---SLEVALAL------CAGAEEAVIMGGAQIYGQA 107
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVEN-NIQFSFVTYV 245
+ P + IT+++ S+E D F P ID + +++ ++ V + + ++FV Y+
Sbjct: 108 M--PLATDLRITEVDLSVEGDAFFPEIDRTHWREAERTERRVSSKGVAYTFVHYL 160
>sp|P12833|DYR3_SALTM Dihydrofolate reductase type 3 OS=Salmonella typhimurium GN=dhfrIII
PE=1 SV=1
Length = 162
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A H+ IGKD +PW+LP+DL+ FK +T+ GK VVMGR+T+ESI RP
Sbjct: 5 LIAALAHNNLIGKDNLIPWHLPADLRHFKAVTL-----GK--PVVMGRRTFESIG---RP 54
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR NVV++ + + E VE+ S+ AL LL + E+ +IGGGQ+ EA
Sbjct: 55 LPGRRNVVVSRNPQWQA---EGVEVAPSLDAALALL------TDCEEAMIIGGGQLYAEA 105
Query: 192 LNAPECDAIHITKIETSIECDTFIPA-IDLSLFQQRYSSQPLVE-NNIQFSFVTYVR 246
L P D +++T I+ + DT P + L + S+ P + N+ FVT R
Sbjct: 106 L--PRADRLYLTYIDAQLNGDTHFPDYLSLGWQELERSTHPADDKNSYACEFVTLSR 160
>sp|Q86XF0|DYRL1_HUMAN Dihydrofolate reductase, mitochondrial OS=Homo sapiens GN=DHFRL1
PE=1 SV=1
Length = 187
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 92/159 (57%), Gaps = 15/159 (9%)
Query: 73 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
+VA + +MGIGK+G LP L ++ ++F+++T ++S GK+N V+MGRKTW SI RP
Sbjct: 8 IVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRP 67
Query: 132 LPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGG 185
L R+N+VL+ G+ +A RS+ AL+L P + ++ ++++GG
Sbjct: 68 LKDRINLVLSRELKEPPQGAHFLA--------RSLDDALKLTERPELANKVDMIWIVGGS 119
Query: 186 QILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQ 224
+ +EA+N + +T+I E DTF IDL ++
Sbjct: 120 SVYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYK 158
>sp|Q07801|DYR_CRYNJ Dihydrofolate reductase OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=DFR1 PE=1
SV=1
Length = 229
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 23/166 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS---TSDPGKRNAVVMGRKTWESISPL 128
VVAAT + GIG +G LPW LP ++K+F ++T +SDP ++N V+MGRKTWESI
Sbjct: 14 AVVAATAENGIGLNGGLPWRLPGEMKYFARVTTGETPSSDPSEQNVVIMGRKTWESIPSR 73
Query: 129 YRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQIL 188
+RPL R NVV++ G ++ + EN + I AL L ++F+IGG +
Sbjct: 74 FRPLKNRRNVVISGKG-VDLGTAENSTVYTDIPSALSALRSTTESGHSPRIFLIGGATLY 132
Query: 189 REA-------------------LNAPECDAIHITKIETSIECDTFI 215
+ + P D I +T+I + ECD ++
Sbjct: 133 TSSLLPSSVPSLNSSTSTSPLPFSRPLIDRILLTRILSPFECDAYL 178
>sp|Q07422|DRTS_TOXGO Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Toxoplasma gondii PE=3 SV=1
Length = 610
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 36/186 (19%)
Query: 67 RRPYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDP---------------- 109
++P +VVA T GIG + LPW +L +D K F ++T +T +
Sbjct: 2 QKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTG 61
Query: 110 ---------GKR-NAVVMGRKTWESISPLYRPLPGRLNVVLTHS-GSFNIAS-------L 151
GKR NAVVMGRKTWES+ +RPL RLN+V++ S +IA+
Sbjct: 62 DSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQ 121
Query: 152 ENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIEC 211
+ V +C S+ AL LL E Y S++++FV+GG + AL+ ++IT++ C
Sbjct: 122 QRVRVCASLPAALSLLEE-EYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPC 180
Query: 212 DTFIPA 217
D F PA
Sbjct: 181 DVFFPA 186
>sp|P43791|DYR_HAEIN Dihydrofolate reductase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=folA PE=3 SV=1
Length = 160
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 22/160 (13%)
Query: 70 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLY 129
+ ++VA T + IGKD ++PW+LP+DL +F+Q T T P V+MGRKT+ESI
Sbjct: 3 FSLIVATTLNNVIGKDNQMPWHLPADLAWFRQNT--TGKP-----VIMGRKTFESIG--- 52
Query: 130 RPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 189
RPLP R N+VL+ + E V S A+ + +++ +IGGG++ +
Sbjct: 53 RPLPKRTNIVLSRQ----LFEHEGVIWKDSFESAVN------FVRDFDEIMLIGGGELFK 102
Query: 190 EALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
+ L P+ D +++T+I+T ++ DTF P ++ ++ +
Sbjct: 103 QYL--PKADKLYLTQIQTELDGDTFFPQLNWEEWEIEFDE 140
>sp|O62583|DYR_ENCCU Dihydrofolate reductase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=DHFR-1 PE=3 SV=1
Length = 205
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 72 VVVAATHDMGIGKDGKLPWNLP--SDLKFFKQLTMSTS---------DPGKRNAVVMGRK 120
+VVA GIG LPW P +D+ +F+ L+ S P NAVVMGR+
Sbjct: 4 LVVALASHRGIGNANALPWPRPLAADMAWFRTLSQSIPLISPDRIALAPSASNAVVMGRR 63
Query: 121 TWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 180
TW+SI +RPL R+NVVL+ + S EN ++ AL+ L PP SS+ F
Sbjct: 64 TWDSIPSRFRPLANRINVVLSRGPA---RSTENTFFIQTFE-ALDSLPLPP--SSM--TF 115
Query: 181 VIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQR 226
VIGG + AL + I T++ S ECD F P ID + +++R
Sbjct: 116 VIGGRDVYSLALESGRPHLIFATEVFESPECDVFFPHIDWASYEKR 161
>sp|Q9K168|DYR_NEIMB Dihydrofolate reductase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=folA PE=3 SV=1
Length = 162
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A ++ IG +PW++P D FFK T+ V+MGRKTWES+ +P
Sbjct: 6 LIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLG-------KPVIMGRKTWESLP--VKP 56
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N+V++ + A E + + E+ ++GG QI +A
Sbjct: 57 LPGRRNIVISRQADYCAAGAETAASLEAALALC---------AGAEEAVIMGGAQIYGQA 107
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVEN-NIQFSFVTYVR 246
+ P + IT+++ S+E D F PAID + +++ ++ V + +++FV Y+R
Sbjct: 108 M--PLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYLR 161
>sp|Q9JSQ9|DYR_NEIMA Dihydrofolate reductase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=folA PE=3 SV=1
Length = 162
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A ++ IG +PW++P D FFK T+ V+MGRKTWES+ +P
Sbjct: 6 LIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLG-------KPVIMGRKTWESLP--VKP 56
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N+V++ + A E + + E+ ++GG QI +A
Sbjct: 57 LPGRRNIVISRQADYCAAGAETAASLEAALALC---------AGAEEAVIMGGAQIYGQA 107
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVEN-NIQFSFVTYVR 246
+ P + IT+++ S+E D F PAID + +++ ++ V + ++FV Y+R
Sbjct: 108 M--PLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTSYAFVHYLR 161
>sp|P11045|DYR_BACSU Dihydrofolate reductase OS=Bacillus subtilis (strain 168) GN=dfrA
PE=1 SV=2
Length = 168
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 23/167 (13%)
Query: 82 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 141
IGKD LPW+LP+DL +FK++T S ++MGRKT+ESI RPLP R N+V+T
Sbjct: 14 IGKDNDLPWHLPNDLAYFKKITSGHS-------IIMGRKTFESIG---RPLPNRKNIVVT 63
Query: 142 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIH 201
+ + + + S+ L++ CS E+ FVIGG Q+ + P D ++
Sbjct: 64 SAPD---SEFQGCTVVSSLKDVLDI------CSGPEECFVIGGAQLYTDLF--PYADRLY 112
Query: 202 ITKIETSIECDTFIPAIDLSLFQQRYSSQPLVE--NNIQFSFVTYVR 246
+TKI E D P D S ++ S Q + N + F+ Y +
Sbjct: 113 MTKIHHEFEGDRHFPEFDESNWKLVSSEQGTKDEKNPYDYEFLMYEK 159
>sp|P31074|DYR_ENTAE Dihydrofolate reductase OS=Enterobacter aerogenes GN=folA PE=3 SV=1
Length = 159
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 22/158 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A D IG + +PW+LP+DL +FK+ T++ VVMGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWDLPADLAWFKRNTLN-------KPVVMGRLTWESIG---RP 53
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N+V+ S S + V+ +S+ A+ C E++ VIGGG++ +
Sbjct: 54 LPGRKNIVI----SSKPGSDDRVQWVKSVDEAIAA------CGDAEEIMVIGGGRVYEQF 103
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
L P+ +++T I+ +E DT P D ++ +S
Sbjct: 104 L--PKAHKLYLTHIDAEVEGDTHFPDYDPDEWESVFSE 139
>sp|P00380|DYR_ENTFC Dihydrofolate reductase OS=Enterococcus faecium GN=folA PE=1 SV=1
Length = 167
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 83/159 (52%), Gaps = 20/159 (12%)
Query: 82 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 141
IGKDG LPW LP+D++FF++ TM +VMGRKT+E + L LP R +VLT
Sbjct: 14 IGKDGLLPWRLPNDMRFFREHTMD-------KILVMGRKTYEGMGKL--SLPYRHIIVLT 64
Query: 142 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSI-EKVFVIGGGQILREALNAPECDAI 200
F + +N E+ SI ELLA Y I E ++V GG +I + L PE I
Sbjct: 65 TQKDFKVE--KNAEVLHSID---ELLA---YAKDIPEDIYVSGGSRIFQALL--PETKII 114
Query: 201 HITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQF 239
T I+ E DTFI ID + F+ + +V Q+
Sbjct: 115 WRTLIDAEFEGDTFIGEIDFTSFELVEEHEGIVNQENQY 153
>sp|Q54277|DYR_STAHA Dihydrofolate reductase OS=Staphylococcus haemolyticus GN=dfrD PE=1
SV=1
Length = 166
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++VA IGKD +PW + SD ++ K T K +A+++GRK +SI R
Sbjct: 9 LIVAMDKKRVIGKDNDIPWRISSDWEYVKNTT-------KGHAIILGRKNLQSIG---RA 58
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LP R N++LT +FN ++ EI SI A +L C + E+VF+ GG QI
Sbjct: 59 LPDRRNIILTRDKNFN---FKDCEIAHSIEAAFKL------CENEEEVFIFGGEQIY--V 107
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQ 225
+ P + +++TKI E DTF P ++ +++
Sbjct: 108 MFLPYVEKMYVTKIHHEFEGDTFFPVVNFDDWKE 141
>sp|P0ABQ6|DYR_SHIFL Dihydrofolate reductase OS=Shigella flexneri GN=folA PE=3 SV=1
Length = 159
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 22/158 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++ +
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRVYEQF 103
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
L P+ +++T I+ +E DT P + ++ +S
Sbjct: 104 L--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSE 139
>sp|P0ABQ4|DYR_ECOLI Dihydrofolate reductase OS=Escherichia coli (strain K12) GN=folA
PE=1 SV=1
Length = 159
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 22/158 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++ +
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRVYEQF 103
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
L P+ +++T I+ +E DT P + ++ +S
Sbjct: 104 L--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSE 139
>sp|P0ABQ5|DYR_ECOL6 Dihydrofolate reductase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=folA PE=3 SV=1
Length = 159
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 22/158 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++ +
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRVYEQF 103
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
L P+ +++T I+ +E DT P + ++ +S
Sbjct: 104 L--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSE 139
>sp|P31073|DYR_CITFR Dihydrofolate reductase OS=Citrobacter freundii GN=folA PE=3 SV=1
Length = 159
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 22/158 (13%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++ A D IG + +PWNLP+DL +FK+ T++ VVMGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVVMGRHTWESIG---RP 53
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LPGR N+V+ S + + V+ +S+ A+ + P ++ VIGGG++ +
Sbjct: 54 LPGRKNIVI----SSKPGTDDRVQWVKSVDEAIAACGDEP------EIMVIGGGRVYEQF 103
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 229
L P+ +++T I+ +E DT P + ++ +S
Sbjct: 104 L--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSE 139
>sp|P0C0P1|DYR_STAES Dihydrofolate reductase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=folA PE=3 SV=1
Length = 161
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 26/177 (14%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++VA IG +LPW+LP+DLK KQLT N +VMGRKT+ SI +P
Sbjct: 5 IIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTG-------NTLVMGRKTFNSIG---KP 54
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LP R NVVLT+ SF+ E V++ S+ EL VF+ GGQ L EA
Sbjct: 55 LPNRRNVVLTNQASFH---HEGVDVINSLDEIKELSGH---------VFIF-GGQTLFEA 101
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVE--NNIQFSFVTYVR 246
+ + D ++IT I+ + DTF P ++ S + ++ N I +F+ VR
Sbjct: 102 M-IDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVR 157
>sp|Q5HPB1|DYR_STAEQ Dihydrofolate reductase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=folA PE=3 SV=1
Length = 161
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 26/177 (14%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++VA IG +LPW+LP+DLK KQLT N +VMGRKT+ SI +P
Sbjct: 5 IIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTG-------NTLVMGRKTFNSIG---KP 54
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LP R NVVLT+ SF+ E V++ S+ EL VF+ GGQ L EA
Sbjct: 55 LPNRRNVVLTNQASFH---HEGVDVINSLDEIKELSGH---------VFIF-GGQTLFEA 101
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVE--NNIQFSFVTYVR 246
+ + D ++IT I+ + DTF P ++ S + ++ N I +F+ VR
Sbjct: 102 M-IDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVR 157
>sp|P0C0P0|DYR_STAEP Dihydrofolate reductase OS=Staphylococcus epidermidis GN=folA PE=1
SV=1
Length = 161
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 26/177 (14%)
Query: 72 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 131
++VA IG +LPW+LP+DLK KQLT N +VMGRKT+ SI +P
Sbjct: 5 IIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTG-------NTLVMGRKTFNSIG---KP 54
Query: 132 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREA 191
LP R NVVLT+ SF+ E V++ S+ EL VF+ GGQ L EA
Sbjct: 55 LPNRRNVVLTNQASFH---HEGVDVINSLDEIKELSGH---------VFIF-GGQTLFEA 101
Query: 192 LNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVE--NNIQFSFVTYVR 246
+ + D ++IT I+ + DTF P ++ S + ++ N I +F+ VR
Sbjct: 102 M-IDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVR 157
>sp|P36591|DYR_SCHPO Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dfr1 PE=2 SV=2
Length = 461
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 44 FYVGVNNNMSTLSNDNASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT 103
+ G+ + M + + H R +V ++ ++GIGK +PW++ ++ +F +T
Sbjct: 211 YKTGIRDFMFSAPTKEPTKHPRDLT--MIVAVSSPNLGIGKKNSMPWHIKQEMAYFANVT 268
Query: 104 MSTSDPGK--------RNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASL---- 151
ST G+ N V+MGR ++S+ RPL R+N+V+T + ++N
Sbjct: 269 SSTESSGQLEEGKSKIMNVVIMGRSCYDSLPKKNRPLKDRINIVITRNSNYNFGLTKKEK 328
Query: 152 --ENVEICRSIHLALELLAEPPYCSS---IEKVFVIGGGQILREALNAPECDAIHITKIE 206
EN+ I AL+L+AE S + KVF+IGG + AL P + T+I
Sbjct: 329 MPENLYAADCIDSALDLVAEKYGADSDIQVGKVFIIGGSFLYGSALYHPLTKNLLFTRIH 388
Query: 207 TSIECDTFIP 216
CD+F P
Sbjct: 389 KEYPCDSFFP 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,474,704
Number of Sequences: 539616
Number of extensions: 3525132
Number of successful extensions: 7550
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7324
Number of HSP's gapped (non-prelim): 103
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)