BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025490
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
++ I D+ N+L Y CF+FI+ +RK+G VLVH AGVSR+AAI+ +LM +EQ S
Sbjct: 52 SISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+PI D S+NL + +FID + GVLVHC AGVSRS + AYLM+ LS
Sbjct: 54 IPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLS 111
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQL 162
+P+ D + ++ + DFID R++GG VLVH AG+SRS I AYLM+T+Q
Sbjct: 55 IPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
M VP+ D + L D+ D D I K+G L+HC AGVSRSAA+ AYLM+ +S
Sbjct: 67 MQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+PI D S+NL + FID R K GVLVH AG+SRS + AYLM+ LS
Sbjct: 55 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLS 112
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+PI D S+NL + +FID + GVLVH AGVSRS + AYLM+ LS
Sbjct: 57 IPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 58/156 (37%)
Query: 9 LFIGNISDAADILQNGSSEITHMLSVLSSASISFFTEWRSSLTIPSKEIKKVYAXXXXXX 68
L++GN DA D+ Q G ++ITH++S+ S
Sbjct: 15 LYLGNFIDAKDLDQLGRNKITHIISIHES------------------------------- 43
Query: 69 XXXXXXXXXXXXRSCLSPTKLLYSLEYAGKDLKLVRMTVPIRDMESENLLDYLDVCFDFI 128
P LL + Y + +P+ D + + C +FI
Sbjct: 44 -----------------PQPLLQDITY---------LRIPVADTPEVPIKKHFKECINFI 77
Query: 129 DRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLS 163
R GG LVH FAG+SRS I+TAY+M L
Sbjct: 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMR 158
+ VP+ DM + Y D D I RK G LVHC AGVSRSA + AYLM+
Sbjct: 73 VKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMK 127
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVHC G SRS ++ AY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 137
Query: 156 LMRTEQL 162
LM +++
Sbjct: 138 LMMRQKM 144
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVHC G SRS ++ AY
Sbjct: 77 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 136
Query: 156 LMRTEQL 162
LM +++
Sbjct: 137 LMMRQKM 143
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRT 159
+ + I D EN++ + + +FID + GG VLVH AG+SRSAA + AY+M T
Sbjct: 60 LVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMET 115
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P D +NL Y + F+FI+ + G G+L+HC AGVSRSA I+ AYLM+ +++
Sbjct: 59 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMT 118
Query: 166 GLNKFI 171
KF+
Sbjct: 119 DAYKFV 124
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P D +NL Y + F+FI+ + G G+L+HC AGVSRSA I+ AYLM+ +++
Sbjct: 55 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMT 114
Query: 166 GLNKFI 171
KF+
Sbjct: 115 DAYKFV 120
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVH G SRS ++ AY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAY 137
Query: 156 LMRTEQL 162
LM +++
Sbjct: 138 LMMRQKM 144
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 102 LVRMTVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMR 158
+ + VP+ D +E+LL +L+ ++ ++GG LV+C G SRSAA+ TAYLMR
Sbjct: 56 VAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMR 113
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQL 162
++P+ D + + + FID + GG VLVH AG+SRSA I AYLM++ ++
Sbjct: 52 SIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRV 109
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLM 157
+ +P D S+NL + FI R G LVHC AGVSRS ++ AY+M
Sbjct: 53 LCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIM 106
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 9 LFIGNISDAADILQNGSSEITHMLSVLSSA 38
L+IGN DA D Q +++TH+LSV SA
Sbjct: 14 LYIGNFKDARDAEQLSKNKVTHILSVHDSA 43
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDRRRKEGGV-LVHCFAGVSRSAAIITAYLMR 158
+ + D E+ +LL Y + + FI + +K G LVH GVSRSA+ + AY M+
Sbjct: 52 NIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMK 105
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P+ D + ++ Y D F+ + ++ VLVHC AGV+RS A I AYL + SS
Sbjct: 76 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKESSP 135
Query: 166 GL 167
L
Sbjct: 136 XL 137
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRK-EGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P+ D ++ + ++ID + G VLVH AG+SRSA I AYLM +++ E
Sbjct: 53 IPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLE 112
Query: 166 GLNKFI 171
+F+
Sbjct: 113 EAFEFV 118
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDR--RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQL 162
+ V D + ++ + DFI R + G +LVHC GVSRSA ++ AYLM L
Sbjct: 54 LGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHL 113
Query: 163 S 163
+
Sbjct: 114 T 114
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+P+ D + ++ Y D F+ + ++ VLVH AGV+RS A+I AYLM + S
Sbjct: 80 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+P+ D + ++ Y D F+ + ++ VLVHC AGV+RS A I AYL + S
Sbjct: 97 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKES 154
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFS 173
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG+ +
Sbjct: 480 GEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV-LERMRYEGVVDMFQT 538
Query: 174 LEYYESTQSYCLFLSDEYEIC 194
++ + + + D+Y++C
Sbjct: 539 VKTLRTQRPAMVQTEDQYQLC 559
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFS 173
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG+ +
Sbjct: 494 GEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIV-LERMRYEGVVDIFQT 552
Query: 174 LEYYESTQSYCLFLSDEYEIC 194
++ + + + DEY+ C
Sbjct: 553 VKVLRTQRPAMVQTEDEYQFC 573
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSDEY 191
G ++VHC AGV R+ I M E++ +E + S ++Y + D+Y
Sbjct: 224 GPIVVHCSAGVGRTGCFIVIDAM-LERIKTEKTVDVYGHVTLMRSQRNYMVQTEDQY 279
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFS 173
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG+ +
Sbjct: 492 GEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIV-LERMRYEGVVDIFQT 550
Query: 174 LEYYESTQSYCLFLSDEYEIC 194
++ + + + DEY+ C
Sbjct: 551 VKMLRTQRPAMVQTEDEYQFC 571
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 134 EGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+G VLVHC GVSRSA ++ A+LM E ++
Sbjct: 131 QGRVLVHCAMGVSRSATLVLAFLMICENMT 160
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 134 EGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+G VLVHC GVSRSA ++ A+LM E ++
Sbjct: 131 QGRVLVHCAMGVSRSATLVLAFLMIYENMT 160
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
K +L+HC G+SRSA +I AY+M+ LS
Sbjct: 116 KREKILIHCQCGLSRSATLIIAYIMKYHNLS 146
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 119 DYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSS 164
++LD+C EG + VHC AG+ R+ +I Y+M+ ++++
Sbjct: 260 EFLDIC------ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTA 299
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 120 YLDVCFDFIDR--RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+ DFI R + G +LVH GVSRSA ++ AYLM L+
Sbjct: 70 HFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLT 115
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 136 GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
G LVHC G+ R+ I+ +YL+ TE L E
Sbjct: 91 GNLVHCVGGIGRTGTILASYLILTEGLEVE 120
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 113 ESENLLDYLDVCFDFIDR--RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
E L D + FI R +RKEG VL+ GV+++ AI+ A+LM ++LS
Sbjct: 65 EGHQLYDSIPNAIKFIIRSIQRKEG-VLIISGTGVNKAPAIVIAFLMYYQRLS 116
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 119 DYLD-VCFDFIDRRRKEGGVLVHCFAGVSRSAAIIT 153
D+LD VC R KE V+VHC AG+ R+ +IT
Sbjct: 221 DFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLIT 256
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDR--RRKEGGVLVHCFAGVSRSAAIITAY 155
+D+ + V D+ + +L + FIDR +LVHC G SRSA ++ AY
Sbjct: 101 RDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAY 160
Query: 156 LM 157
LM
Sbjct: 161 LM 162
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
V VHC AG SRSA ++ AYL++ S E
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPE 120
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIIT 153
+++L+ ++ D+I+R G +VHC AGV R+ I
Sbjct: 198 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIA 237
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIIT 153
+++L+ ++ D+I+R G +VHC AGV R+ I
Sbjct: 201 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIA 240
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIIT 153
+++L+ ++ D+I+R G +VHC AGV R+ I
Sbjct: 217 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIA 256
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VHC AG+ R+ II ++ E +S++GL+
Sbjct: 205 EPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKGLD 259
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VHC AG+ R+ II ++ E +S++GL+
Sbjct: 183 EPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKGLD 237
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
K +L+H G+SRSA +I AY+M+ LS
Sbjct: 116 KREKILIHSQCGLSRSATLIIAYIMKYHNLS 146
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VHC AG+ R+ II ++ E +S++GL+
Sbjct: 425 EPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKGLD 479
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
K +L+H G+SRSA +I AY+M+ LS
Sbjct: 116 KREKILIHXQCGLSRSATLIIAYIMKYHNLS 146
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 119 DYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSS 164
++LD+C EG + VH AG+ R+ +I Y+M+ ++++
Sbjct: 260 EFLDIC------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTA 299
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 136 GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
G LVH G+ R+ I+ +YL+ TE L E
Sbjct: 91 GNLVHSVGGIGRTGTILASYLILTEGLEVE 120
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 104 RMTVPIRDMESENLL-DYLDVCFDFIDRRRKEGGVLV--HCFAGVSRSAAIITAYLMRTE 160
++ VP + + E+++ +++D +F + K G+LV HC G++R+ ++ YLM T
Sbjct: 83 KIQVPGQTLPPESIVQEFIDTVKEFTE---KCPGMLVGVHCTHGINRTGYMVCRYLMHTL 139
Query: 161 QLS-SEGLNKF 170
++ E +++F
Sbjct: 140 GIAPQEAIDRF 150
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
V VH AG SRSA ++ AYL++ S E
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPE 121
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 117 LLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAII 152
L+++ + D++ + E +LVHC AGV R+ I
Sbjct: 220 LINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFI 255
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 216 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 248
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M + +N F L++ + ++Y + +
Sbjct: 224 RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGF-LKHIRTQRNYLVQTEE 282
Query: 190 EY 191
+Y
Sbjct: 283 QY 284
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 270
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 270
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 270
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 270
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 269
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGL 167
++HC AGV R+A +I A M R QLS E +
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM 269
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M +Q+ + + L++ + ++Y + +
Sbjct: 232 RMPETGPVLVHCSAGVGRTGTYIVIDSM-LQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 290
Query: 190 EY 191
+Y
Sbjct: 291 QY 292
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VH AG+ R+ II ++ E +S++GL+
Sbjct: 185 EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML-MENISTKGLD 239
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VH AG+ R+ II ++ E +S++GL+
Sbjct: 183 EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML-MENISTKGLD 237
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGL 167
G V+VHC AG+ R+ I A + +QL EG+
Sbjct: 210 GPVVVHCSAGIGRTGCFI-ATSIGCQQLKEEGV 241
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 117 LLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAII 152
L+++ + D++ + E +LVHC AGV R+ I
Sbjct: 220 LINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFI 255
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 137 VLVHCFAGVSRSAAIITAY 155
+LVHC AG+ R+ +I AY
Sbjct: 225 ILVHCSAGIGRTGTLIGAY 243
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGL 167
G V+VHC AG+ R+ I A + +QL EG+
Sbjct: 223 GPVVVHCSAGIGRTGCFI-ATSIGCQQLKEEGV 254
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M +Q+ + + L++ + ++Y + +
Sbjct: 231 RMPETGPVLVHCSAGVGRTGTYIVIDSM-LQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 289
Query: 190 EY 191
+Y
Sbjct: 290 QY 291
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M +Q+ + + L++ + ++Y + +
Sbjct: 231 RMPETGPVLVHCSAGVGRTGTYIVIDSM-LQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 289
Query: 190 EY 191
+Y
Sbjct: 290 QY 291
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M +Q+ + + L++ + ++Y + +
Sbjct: 231 RMPETGPVLVHCSAGVGRTGTYIVIDSM-LQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 289
Query: 190 EY 191
+Y
Sbjct: 290 QY 291
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 130 RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSD 189
R + G VLVHC AGV R+ I M +Q+ + + L++ + ++Y + +
Sbjct: 242 RMPETGPVLVHCSAGVGRTGTYIVIDSM-LQQIKDKSTVNVLGFLKHIRTQRNYLVQTEE 300
Query: 190 EY 191
+Y
Sbjct: 301 QY 302
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 130 RRRKEGGVLVHCFAGVSRSAA--IITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFL 187
R + G VLVHC AGV R+ +I + L + + S+ + F L++ + ++Y +
Sbjct: 232 RXPETGPVLVHCSAGVGRTGTYIVIDSXLQQIKDKSTVNVLGF---LKHIRTQRNYLVQT 288
Query: 188 SDEY 191
++Y
Sbjct: 289 EEQY 292
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGLN 168
E +L +LD + G ++VH AG+ R+ II ++ E +S++GL+
Sbjct: 425 EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDML-MENISTKGLD 479
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 137 VLVHCFAGVSRSAAIITAY 155
V+VHC AG+ R+ +I AY
Sbjct: 222 VVVHCSAGIGRTGTLIGAY 240
>pdb|1YWF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Protein
Tyrosine Phosphatase Ptpb
pdb|2OZ5|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Protein
Tyrosine Phosphatase Ptpb In Complex With The Specific
Inhibitor Omts
pdb|2OZ5|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Protein
Tyrosine Phosphatase Ptpb In Complex With The Specific
Inhibitor Omts
Length = 296
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSDEYEICDC 196
VL HCFAG R+ ++ L + GL++ + +Y S S + E+
Sbjct: 176 VLTHCFAGKDRTGFVVALV------LEAVGLDRDVIVADYLRSNDSVPQLRARISEMIQQ 229
Query: 197 HF 198
F
Sbjct: 230 RF 231
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGLNKFIFSLEYYESTQSYCLFLSDEYEIC 194
++VHC AGV RS IT + + +S+ ++ IF + Y + + +++ IC
Sbjct: 238 IVVHCSAGVGRSGTFITLDRILQQINTSDYVD--IFGIVYAMRKERVWMVQTEQQYIC 293
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,688,065
Number of Sequences: 62578
Number of extensions: 180765
Number of successful extensions: 486
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 88
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)