Query 025491
Match_columns 252
No_of_seqs 130 out of 1082
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 06:23:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025491.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025491hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00332 Glyco_hydro_17: Glyco 100.0 1.3E-73 2.9E-78 521.4 11.7 246 2-251 63-310 (310)
2 COG5309 Exo-beta-1,3-glucanase 100.0 1.4E-37 3E-42 273.1 16.8 184 8-243 117-305 (305)
3 PF07745 Glyco_hydro_53: Glyco 98.5 3.5E-06 7.5E-11 78.2 14.2 174 22-249 123-329 (332)
4 PF11790 Glyco_hydro_cc: Glyco 97.4 0.014 3.1E-07 51.6 16.4 165 22-245 63-232 (239)
5 smart00633 Glyco_10 Glycosyl h 97.2 0.022 4.8E-07 50.6 15.7 79 156-248 171-250 (254)
6 PRK10150 beta-D-glucuronidase; 96.7 0.16 3.4E-06 50.7 18.2 185 10-248 394-584 (604)
7 PF03198 Glyco_hydro_72: Gluca 96.2 0.031 6.6E-07 51.5 8.8 76 23-116 134-217 (314)
8 COG3867 Arabinogalactan endo-1 95.8 0.059 1.3E-06 49.5 8.7 180 22-250 169-389 (403)
9 PF00150 Cellulase: Cellulase 94.4 0.78 1.7E-05 40.1 11.8 41 21-61 118-165 (281)
10 PF00232 Glyco_hydro_1: Glycos 89.0 0.13 2.9E-06 49.7 0.3 78 165-247 353-441 (455)
11 TIGR03356 BGL beta-galactosida 82.2 4.2 9.1E-05 39.1 6.8 73 165-243 335-413 (427)
12 PRK13511 6-phospho-beta-galact 79.2 6.9 0.00015 38.1 7.3 73 165-243 365-445 (469)
13 PLN02998 beta-glucosidase 78.3 6.1 0.00013 38.9 6.6 74 165-244 390-466 (497)
14 PF02055 Glyco_hydro_30: O-Gly 75.1 37 0.00081 33.5 11.1 59 10-68 208-278 (496)
15 PLN02814 beta-glucosidase 73.3 9.3 0.0002 37.7 6.4 74 165-244 385-461 (504)
16 PF06117 DUF957: Enterobacteri 71.8 6.4 0.00014 27.8 3.5 38 9-58 14-55 (65)
17 PLN02849 beta-glucosidase 68.9 14 0.0003 36.4 6.6 75 165-244 383-461 (503)
18 PF12876 Cellulase-like: Sugar 66.7 11 0.00023 27.8 4.2 50 19-70 5-64 (88)
19 TIGR01233 lacG 6-phospho-beta- 66.2 16 0.00035 35.6 6.4 71 168-243 368-443 (467)
20 COG4782 Uncharacterized protei 59.9 35 0.00075 32.4 7.0 57 144-203 124-184 (377)
21 PF04909 Amidohydro_2: Amidohy 59.5 38 0.00083 29.0 7.0 118 7-178 56-175 (273)
22 PF05990 DUF900: Alpha/beta hy 57.7 52 0.0011 28.8 7.5 41 160-203 42-86 (233)
23 PF02449 Glyco_hydro_42: Beta- 57.5 1.3E+02 0.0028 28.1 10.6 55 41-115 208-262 (374)
24 PF03662 Glyco_hydro_79n: Glyc 57.5 11 0.00025 35.0 3.4 144 8-182 144-300 (319)
25 COG3934 Endo-beta-mannanase [C 55.5 49 0.0011 32.7 7.4 184 9-249 123-312 (587)
26 PRK09593 arb 6-phospho-beta-gl 54.2 81 0.0017 30.9 8.9 72 168-244 369-448 (478)
27 PF00331 Glyco_hydro_10: Glyco 51.3 15 0.00032 33.8 3.2 184 7-247 107-311 (320)
28 PRK09589 celA 6-phospho-beta-g 51.1 40 0.00086 33.0 6.2 73 167-244 367-447 (476)
29 PF01229 Glyco_hydro_39: Glyco 49.0 1.9E+02 0.0041 28.1 10.6 180 27-246 158-350 (486)
30 PRK09852 cryptic 6-phospho-bet 48.7 46 0.00099 32.6 6.2 73 167-244 365-444 (474)
31 PRK15014 6-phospho-beta-glucos 47.7 40 0.00086 33.0 5.6 72 167-243 368-447 (477)
32 PF14587 Glyco_hydr_30_2: O-Gl 46.3 1.1E+02 0.0024 29.2 8.2 49 22-72 171-228 (384)
33 KOG2775 Metallopeptidase [Gene 45.3 43 0.00092 31.2 5.0 107 42-176 113-220 (397)
34 KOG0626 Beta-glucosidase, lact 44.7 63 0.0014 32.1 6.4 74 162-241 402-485 (524)
35 COG2159 Predicted metal-depend 44.3 2.4E+02 0.0053 25.6 9.9 122 9-182 86-209 (293)
36 cd06598 GH31_transferase_CtsZ 39.2 3E+02 0.0065 25.1 10.6 31 87-117 65-95 (317)
37 COG1058 CinA Predicted nucleot 37.7 1.1E+02 0.0023 27.7 6.3 59 24-108 3-64 (255)
38 PF00135 COesterase: Carboxyle 34.1 31 0.00066 33.0 2.5 18 4-21 188-205 (535)
39 COG1453 Predicted oxidoreducta 33.0 30 0.00064 33.0 2.1 29 165-196 194-222 (391)
40 PF13547 GTA_TIM: GTA TIM-barr 32.3 71 0.0015 29.4 4.3 82 22-117 17-111 (299)
41 cd02876 GH18_SI-CLP Stabilin-1 31.3 2E+02 0.0043 26.1 7.2 101 2-117 87-191 (318)
42 PF14903 WG_beta_rep: WG conta 30.2 37 0.00081 19.8 1.5 16 236-251 1-16 (35)
43 COG4213 XylF ABC-type xylose t 29.7 77 0.0017 29.6 4.1 53 4-70 199-251 (341)
44 PF07799 DUF1643: Protein of u 29.6 54 0.0012 26.0 2.8 38 79-118 21-60 (136)
45 cd06549 GH18_trifunctional GH1 27.3 2.5E+02 0.0054 25.3 7.1 90 3-117 84-173 (298)
46 COG2272 PnbA Carboxylesterase 27.1 40 0.00087 33.2 1.9 29 4-32 160-191 (491)
47 COG0431 Predicted flavoprotein 26.6 2.8E+02 0.0061 23.1 6.9 76 9-104 20-96 (184)
48 KOG4841 Dolichol-phosphate man 26.5 66 0.0014 24.3 2.5 33 28-60 58-93 (95)
49 PRK15321 putative type III sec 24.5 1.9E+02 0.0041 22.4 4.8 47 152-211 38-84 (120)
50 cd00598 GH18_chitinase-like Th 24.1 1.4E+02 0.0031 24.7 4.6 57 3-60 84-142 (210)
51 KOG2670 Enolase [Carbohydrate 23.8 1.1E+02 0.0025 28.8 4.1 68 2-73 176-250 (433)
52 COG2326 Uncharacterized conser 21.5 4E+02 0.0086 24.3 7.0 68 165-242 70-157 (270)
53 PF14552 Tautomerase_2: Tautom 21.1 94 0.002 22.9 2.5 42 186-227 39-80 (82)
54 TIGR02690 resist_ArsH arsenica 20.8 5E+02 0.011 22.7 7.5 76 7-104 44-119 (219)
55 KOG2555 AICAR transformylase/I 20.8 39 0.00084 32.8 0.5 43 88-130 79-121 (588)
56 cd02872 GH18_chitolectin_chito 20.4 1.3E+02 0.0027 27.8 3.8 97 3-117 92-192 (362)
No 1
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=100.00 E-value=1.3e-73 Score=521.40 Aligned_cols=246 Identities=52% Similarity=0.909 Sum_probs=205.8
Q ss_pred CCCHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCC
Q 025491 2 ASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPP 81 (252)
Q Consensus 2 a~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pP 81 (252)
|+++..|..||++||.||+|.++|++|+||||++...... .|+|+|+++|++|+++||+++|||+|+++++++.++|||
T Consensus 63 a~~~~~A~~Wv~~nv~~~~~~~~i~~i~VGnEv~~~~~~~-~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PP 141 (310)
T PF00332_consen 63 ASSQSAAGSWVRTNVLPYLPAVNIRYIAVGNEVLTGTDNA-YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPP 141 (310)
T ss_dssp HHHHHHHHHHHHHHTCTCTTTSEEEEEEEEES-TCCSGGG-GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSG
T ss_pred ccCHHHHhhhhhhcccccCcccceeeeecccccccCccce-eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCC
Confidence 5678899999999999999999999999999999865422 899999999999999999989999999999999999999
Q ss_pred CCccccCCCcchhHHHHHHHHhcCCCceeccCccccccCC-CCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHH
Q 025491 82 SAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGD-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAAL 160 (252)
Q Consensus 82 s~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~-~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~ 160 (252)
|+|.|++++.++|+++++||.++++|||+|+||||.+..+ ..++|+||+|++++... |++++|+||||+|+|++++||
T Consensus 142 S~g~F~~~~~~~~~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~-D~~~~y~nlfDa~~da~~~a~ 220 (310)
T PF00332_consen 142 SAGVFRSDIASVMDPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV-DGGLAYTNLFDAMVDAVYAAM 220 (310)
T ss_dssp GG-EESHHHHHHHHHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE-ETTEEESSHHHHHHHHHHHHH
T ss_pred ccCcccccchhhhhHHHHHhhccCCCceeccchhhhccCCcccCCccccccccccccc-ccchhhhHHHHHHHHHHHHHH
Confidence 9999999988999999999999999999999999999988 89999999999887666 889999999999999999999
Q ss_pred HHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCC-CceEEEEEeecCCCCCCCCCCCeeeee
Q 025491 161 EKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPR-PIETYIFAMFDENGKTGPETERHWGLF 239 (252)
Q Consensus 161 ~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~-~~~~~~F~~fde~~K~g~~~E~~wGlf 239 (252)
+|+|+++++|+|+||||||+|+. .++++||+.|++++++++.+|||+||+ ++++|||++|||+||+++.+|||||||
T Consensus 221 ~~~g~~~~~vvv~ETGWPs~G~~--~a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf 298 (310)
T PF00332_consen 221 EKLGFPNVPVVVGETGWPSAGDP--GATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLF 298 (310)
T ss_dssp HTTT-TT--EEEEEE---SSSST--TCSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB
T ss_pred HHhCCCCceeEEeccccccCCCC--CCCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeE
Confidence 99999999999999999999995 899999999999999999999999999 999999999999999987899999999
Q ss_pred cCCCCceeeccc
Q 025491 240 APDKQPKYQVNF 251 (252)
Q Consensus 240 ~~~~~~ky~~~~ 251 (252)
++||++||+++|
T Consensus 299 ~~d~~~ky~~~f 310 (310)
T PF00332_consen 299 YPDGTPKYDLDF 310 (310)
T ss_dssp -TTSSBSS----
T ss_pred CCCCCeecCCCC
Confidence 999999999987
No 2
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=273.10 Aligned_cols=184 Identities=20% Similarity=0.380 Sum_probs=153.3
Q ss_pred HHHHHHHhccCCCCCceEEEEEecccccCCCC-CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccc
Q 025491 8 ANTWVQDNVQNFANNVKFKYIAVGNEAKPGDD-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSF 86 (252)
Q Consensus 8 a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f 86 (252)
.++=....+.++...+.|++|+||||+|+|++ ++++|+.+|.++|++|+.+|+++ ||+|+++|.++.++
T Consensus 117 ~~~til~ay~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~g--pV~T~dsw~~~~~n-------- 186 (305)
T COG5309 117 VEKTILSAYLPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDG--PVTTVDSWNVVINN-------- 186 (305)
T ss_pred HHHHHHHHHhccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCC--ceeecccceeeeCC--------
Confidence 33356667889989999999999999999999 99999999999999999999965 89999999988762
Q ss_pred cCCCcchhHHHHHHHHhcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCC
Q 025491 87 KQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGG 166 (252)
Q Consensus 87 ~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~ 166 (252)
+. ||++.|++|+|.||||+.+. +.++.+ .++-.|+.-++.++ | .
T Consensus 187 -----p~-------l~~~SDfia~N~~aYwd~~~----------------~a~~~~----~f~~~q~e~vqsa~---g-~ 230 (305)
T COG5309 187 -----PE-------LCQASDFIAANAHAYWDGQT----------------VANAAG----TFLLEQLERVQSAC---G-T 230 (305)
T ss_pred -----hH-------Hhhhhhhhhcccchhccccc----------------hhhhhh----HHHHHHHHHHHHhc---C-C
Confidence 21 78889999999999998643 222332 34446677666553 3 4
Q ss_pred CCcEEEcccccCCCCCC--CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCC--CCCCeeeeecCC
Q 025491 167 SLDIVISESGWPTAGGD--GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGP--ETERHWGLFAPD 242 (252)
Q Consensus 167 ~~~v~v~ETGWPs~G~~--~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~--~~E~~wGlf~~~ 242 (252)
+|+++|+||||||.|.. ++.||++||+.|++++++.+ |..++++|+|++|||+||..+ ++|+|||++..+
T Consensus 231 ~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~~------~~~G~d~fvfeAFdd~WK~~~~y~VEkywGv~~s~ 304 (305)
T COG5309 231 KKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNAL------RSCGYDVFVFEAFDDDWKADGSYGVEKYWGVLSSD 304 (305)
T ss_pred CccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhhh------hccCccEEEeeeccccccCccccchhhceeeeccC
Confidence 49999999999999974 88999999999999999987 334999999999999999764 799999999876
Q ss_pred C
Q 025491 243 K 243 (252)
Q Consensus 243 ~ 243 (252)
+
T Consensus 305 ~ 305 (305)
T COG5309 305 R 305 (305)
T ss_pred C
Confidence 4
No 3
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=98.48 E-value=3.5e-06 Score=78.18 Aligned_cols=174 Identities=17% Similarity=0.229 Sum_probs=93.6
Q ss_pred CceEEEEEecccccCC-----C-C-CHHHHHHHHHHHHHHHHhCCCCCCeeEec--ccccccccccCCCCCccccCCCcc
Q 025491 22 NVKFKYIAVGNEAKPG-----D-D-YAQYLVPAMRNIQNAINGASLGSQIKVST--AIELGALDASSPPSAGSFKQDYKP 92 (252)
Q Consensus 22 ~~~i~~I~VGNEvl~~-----~-~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT--~~~~~~l~~s~pPs~~~f~~~~~~ 92 (252)
+...+.|.||||+-.+ + . ..+.+...++...+++++.+- ++||-. +...+. .
T Consensus 123 G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p--~~kV~lH~~~~~~~-----------------~ 183 (332)
T PF07745_consen 123 GVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDP--NIKVMLHLANGGDN-----------------D 183 (332)
T ss_dssp T--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSS--TSEEEEEES-TTSH-----------------H
T ss_pred CCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCC--CCcEEEEECCCCch-----------------H
Confidence 5678999999997542 1 2 466788888888888888654 455543 221110 1
Q ss_pred hhHHHHHHHHh---cCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCc
Q 025491 93 ILDPLIAFLNE---NNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLD 169 (252)
Q Consensus 93 ~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~ 169 (252)
.++-..+.|.. .-|.++++.||||... -+.+...++.+ .++. +|+
T Consensus 184 ~~~~~f~~l~~~g~d~DviGlSyYP~w~~~--------------------------l~~l~~~l~~l---~~ry---~K~ 231 (332)
T PF07745_consen 184 LYRWFFDNLKAAGVDFDVIGLSYYPFWHGT--------------------------LEDLKNNLNDL---ASRY---GKP 231 (332)
T ss_dssp HHHHHHHHHHHTTGG-SEEEEEE-STTST---------------------------HHHHHHHHHHH---HHHH---T-E
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCCCcch--------------------------HHHHHHHHHHH---HHHh---CCe
Confidence 11112222222 3399999999999730 02222233332 2454 599
Q ss_pred EEEcccccCCCCCC---------------CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEE-eecCCC-----CC
Q 025491 170 IVISESGWPTAGGD---------------GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFA-MFDENG-----KT 228 (252)
Q Consensus 170 v~v~ETGWPs~G~~---------------~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~-~fde~~-----K~ 228 (252)
|+|.|||||..-.+ .-.+|++.|+.|++.+++.+.. .|. .+++.+|+-| ..-... ..
T Consensus 232 V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~-~p~-~~g~GvfYWeP~w~~~~~~~~~~~ 309 (332)
T PF07745_consen 232 VMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKN-VPN-GGGLGVFYWEPAWIPVENGWDWGG 309 (332)
T ss_dssp EEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHT-S---TTEEEEEEE-TT-GGGTTHHHHTT
T ss_pred eEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHH-hcc-CCeEEEEeeccccccCCcccccCC
Confidence 99999999998221 1135899999999999998842 111 1277888776 222221 22
Q ss_pred CCCCCCeeeeecCCCCceeec
Q 025491 229 GPETERHWGLFAPDKQPKYQV 249 (252)
Q Consensus 229 g~~~E~~wGlf~~~~~~ky~~ 249 (252)
|...|.. +||+.+|++--.|
T Consensus 310 g~~w~n~-~lFD~~g~~l~sl 329 (332)
T PF07745_consen 310 GSSWDNQ-ALFDFNGNALPSL 329 (332)
T ss_dssp TSSSSBG-SSB-TTSBB-GGG
T ss_pred CCCcccc-ccCCCCCCCchHh
Confidence 2233333 8999998876544
No 4
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=97.39 E-value=0.014 Score=51.59 Aligned_cols=165 Identities=15% Similarity=0.153 Sum_probs=97.1
Q ss_pred CceEEEEEecccccCCCC---CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHH
Q 025491 22 NVKFKYIAVGNEAKPGDD---YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLI 98 (252)
Q Consensus 22 ~~~i~~I~VGNEvl~~~~---~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l 98 (252)
...+++|..=||+=.... ++++.+...+++-+.|+. ..+++..+.....-.. +|+. ..-|...+
T Consensus 63 ~~~~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~----~~~~l~sPa~~~~~~~--~~~g-------~~Wl~~F~ 129 (239)
T PF11790_consen 63 HPGSKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS----PGVKLGSPAVAFTNGG--TPGG-------LDWLSQFL 129 (239)
T ss_pred ccCccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc----CCcEEECCeecccCCC--CCCc-------cHHHHHHH
Confidence 357799999999976543 788888888888787774 2478877653111000 0111 13344333
Q ss_pred HHHH--hcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCcEEEcccc
Q 025491 99 AFLN--ENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESG 176 (252)
Q Consensus 99 ~fL~--~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~v~v~ETG 176 (252)
+-+. ...|++.+|.| .. + -.-|...++.+ .++.| +||+|||.|
T Consensus 130 ~~~~~~~~~D~iavH~Y---~~--~------------------------~~~~~~~i~~~---~~~~~---kPIWITEf~ 174 (239)
T PF11790_consen 130 SACARGCRVDFIAVHWY---GG--D------------------------ADDFKDYIDDL---HNRYG---KPIWITEFG 174 (239)
T ss_pred HhcccCCCccEEEEecC---Cc--C------------------------HHHHHHHHHHH---HHHhC---CCEEEEeec
Confidence 3222 24566666666 10 0 01222333333 34443 999999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCCCCCCeeeeecCCCCc
Q 025491 177 WPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQP 245 (252)
Q Consensus 177 WPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~~~E~~wGlf~~~~~~ 245 (252)
+.. +.. ..+.+++..|++..+..+.+ ++.--.++||. |.... ......-.|++.+|++
T Consensus 175 ~~~-~~~--~~~~~~~~~fl~~~~~~ld~----~~~VeryawF~-~~~~~---~~~~~~~~L~~~~G~l 232 (239)
T PF11790_consen 175 CWN-GGS--QGSDEQQASFLRQALPWLDS----QPYVERYAWFG-FMNDG---SGVNPNSALLDADGSL 232 (239)
T ss_pred ccC-CCC--CCCHHHHHHHHHHHHHHHhc----CCCeeEEEecc-ccccc---CCCccccccccCCCCc
Confidence 876 223 67888899999999999842 23345677888 22222 2345566777777754
No 5
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=97.21 E-value=0.022 Score=50.64 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=54.0
Q ss_pred HHHHHHHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecC-CCCCCCCCCC
Q 025491 156 TYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE-NGKTGPETER 234 (252)
Q Consensus 156 ~~~a~~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~ 234 (252)
+...|++++-.+++|+|||.+-|..+ +++.|..+++.++..+.+ .|....+++..+.|. .|.++ .
T Consensus 171 ~~~~l~~~~~~g~pi~iTE~dv~~~~------~~~~qA~~~~~~l~~~~~----~p~v~gi~~Wg~~d~~~W~~~----~ 236 (254)
T smart00633 171 IRAALDRFASLGLEIQITELDISGYP------NPQAQAADYEEVFKACLA----HPAVTGVTVWGVTDKYSWLDG----G 236 (254)
T ss_pred HHHHHHHHHHcCCceEEEEeecCCCC------cHHHHHHHHHHHHHHHHc----CCCeeEEEEeCCccCCcccCC----C
Confidence 34445555445899999999988643 337788899999988843 133345556666654 46642 5
Q ss_pred eeeeecCCCCceee
Q 025491 235 HWGLFAPDKQPKYQ 248 (252)
Q Consensus 235 ~wGlf~~~~~~ky~ 248 (252)
+-|||+.|++||-.
T Consensus 237 ~~~L~d~~~~~kpa 250 (254)
T smart00633 237 APLLFDANYQPKPA 250 (254)
T ss_pred CceeECCCCCCChh
Confidence 78999999998854
No 6
>PRK10150 beta-D-glucuronidase; Provisional
Probab=96.68 E-value=0.16 Score=50.74 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=102.3
Q ss_pred HHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCC
Q 025491 10 TWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQD 89 (252)
Q Consensus 10 ~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~ 89 (252)
+-+++.|..+..--.|..=.+|||.-...+ ..-..++.+.+.+++.. ..=+|+.+..+. . +|.. +.
T Consensus 394 ~~~~~mv~r~~NHPSIi~Ws~gNE~~~~~~---~~~~~~~~l~~~~k~~D--ptR~vt~~~~~~---~--~~~~----~~ 459 (604)
T PRK10150 394 QAIRELIARDKNHPSVVMWSIANEPASREQ---GAREYFAPLAELTRKLD--PTRPVTCVNVMF---A--TPDT----DT 459 (604)
T ss_pred HHHHHHHHhccCCceEEEEeeccCCCccch---hHHHHHHHHHHHHHhhC--CCCceEEEeccc---C--Cccc----cc
Confidence 336667777755456788999999753322 22233445555555444 233566553211 0 0100 00
Q ss_pred CcchhHHHHHHHHhcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCc
Q 025491 90 YKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLD 169 (252)
Q Consensus 90 ~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~ 169 (252)
+.+..|++..|.|+=|-... .+ + ......++..++.. .++ + ++|
T Consensus 460 -----------~~~~~Dv~~~N~Y~~wy~~~-~~--~----------------~~~~~~~~~~~~~~---~~~--~-~kP 503 (604)
T PRK10150 460 -----------VSDLVDVLCLNRYYGWYVDS-GD--L----------------ETAEKVLEKELLAW---QEK--L-HKP 503 (604)
T ss_pred -----------ccCcccEEEEcccceecCCC-CC--H----------------HHHHHHHHHHHHHH---HHh--c-CCC
Confidence 22334999999986332100 00 0 00112222222211 112 2 799
Q ss_pred EEEcccccCCCCC----CCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCC--CCCCeeeeecCCC
Q 025491 170 IVISESGWPTAGG----DGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGP--ETERHWGLFAPDK 243 (252)
Q Consensus 170 v~v~ETGWPs~G~----~~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~--~~E~~wGlf~~~~ 243 (252)
++++|.|+.+.-+ ....-|.+.|..|++...+.+.+ +|.-+..|+-.+||-....+. .-.-+.||++.+|
T Consensus 504 ~~isEyg~~~~~~~h~~~~~~~~ee~q~~~~~~~~~~~~~----~p~~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~dr 579 (604)
T PRK10150 504 IIITEYGADTLAGLHSMYDDMWSEEYQCAFLDMYHRVFDR----VPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDR 579 (604)
T ss_pred EEEEccCCccccccccCCCCCCCHHHHHHHHHHHHHHHhc----CCceEEEEEEeeeccCCCCCCcccCCCcceeEcCCC
Confidence 9999999766322 12245678888888877776642 455778999999995444321 1224789999999
Q ss_pred Cceee
Q 025491 244 QPKYQ 248 (252)
Q Consensus 244 ~~ky~ 248 (252)
+||-.
T Consensus 580 ~~k~~ 584 (604)
T PRK10150 580 QPKSA 584 (604)
T ss_pred CChHH
Confidence 99854
No 7
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=96.16 E-value=0.031 Score=51.52 Aligned_cols=76 Identities=22% Similarity=0.237 Sum_probs=46.5
Q ss_pred ceEEEEEecccccCCCC---CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHHH
Q 025491 23 VKFKYIAVGNEAKPGDD---YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIA 99 (252)
Q Consensus 23 ~~i~~I~VGNEvl~~~~---~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l~ 99 (252)
+++-+..+|||++.... .+..+=.+++.+|+-+++.++ .+|||+-+-+-. ...-.++.+
T Consensus 134 ~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVGYsaaD~-----------------~~~r~~~a~ 195 (314)
T PF03198_consen 134 DNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVGYSAADD-----------------AEIRQDLAN 195 (314)
T ss_dssp TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEEE--------------------TTTHHHHHH
T ss_pred CceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceeEEccCC-----------------hhHHHHHHH
Confidence 68999999999997643 678899999999999999998 469999764211 111233445
Q ss_pred HHH-----hcCCCceeccCccc
Q 025491 100 FLN-----ENNSPLLVNLYPYF 116 (252)
Q Consensus 100 fL~-----~~~d~~~vN~yPff 116 (252)
+|. +..|++++|.|-+=
T Consensus 196 Yl~Cg~~~~~iDf~g~N~Y~WC 217 (314)
T PF03198_consen 196 YLNCGDDDERIDFFGLNSYEWC 217 (314)
T ss_dssp HTTBTT-----S-EEEEE----
T ss_pred HhcCCCcccccceeeeccceec
Confidence 554 35689999999764
No 8
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.059 Score=49.50 Aligned_cols=180 Identities=22% Similarity=0.321 Sum_probs=96.7
Q ss_pred CceEEEEEecccccCC-----CC--CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchh
Q 025491 22 NVKFKYIAVGNEAKPG-----DD--YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPIL 94 (252)
Q Consensus 22 ~~~i~~I~VGNEvl~~-----~~--~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~ 94 (252)
+..+.-|-||||.-.+ ++ .-..+...++.--.+++... ..|||-.- |.+.-.+ +.|+ -+.
T Consensus 169 Gi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~--p~ikv~lH-----la~g~~n--~~y~----~~f 235 (403)
T COG3867 169 GILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVS--PTIKVALH-----LAEGENN--SLYR----WIF 235 (403)
T ss_pred CCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcC--CCceEEEE-----ecCCCCC--chhh----HHH
Confidence 4567889999998542 22 23345555555555555543 35666542 3322112 2333 222
Q ss_pred HHHHHHHHhcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCcEEEcc
Q 025491 95 DPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISE 174 (252)
Q Consensus 95 ~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~v~v~E 174 (252)
..+-+. .-.-|.+..--||||...-+ || ...++.+. .+ -+|+|+|.|
T Consensus 236 d~ltk~-nvdfDVig~SyYpyWhgtl~-------------------------nL-~~nl~dia---~r---Y~K~VmV~E 282 (403)
T COG3867 236 DELTKR-NVDFDVIGSSYYPYWHGTLN-------------------------NL-TTNLNDIA---SR---YHKDVMVVE 282 (403)
T ss_pred HHHHHc-CCCceEEeeeccccccCcHH-------------------------HH-HhHHHHHH---HH---hcCeEEEEE
Confidence 222111 11227899999999974210 11 11122221 12 269999999
Q ss_pred ccc--------------CCCCCC-CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEE-------------------
Q 025491 175 SGW--------------PTAGGD-GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFA------------------- 220 (252)
Q Consensus 175 TGW--------------Ps~G~~-~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~------------------- 220 (252)
|+. |+.+.. +-..+++-|.+|.+++|..+. ..|.. ++..+|+.|
T Consensus 283 tay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~-nvp~~-~GlGvFYWEp~wipv~~g~gwat~~~~~ 360 (403)
T COG3867 283 TAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVK-NVPKS-NGLGVFYWEPAWIPVVLGSGWATSYAAK 360 (403)
T ss_pred ecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHH-hCCCC-CceEEEEecccceeccCCCccccchhhc
Confidence 998 665532 345777889999999999883 12221 155566554
Q ss_pred eecCCCCCCCCCCCeeeeecCCCCceeecc
Q 025491 221 MFDENGKTGPETERHWGLFAPDKQPKYQVN 250 (252)
Q Consensus 221 ~fde~~K~g~~~E~~wGlf~~~~~~ky~~~ 250 (252)
.-.|+|+.|..+ -+=-||+.+|.|--+|+
T Consensus 361 y~~e~w~~gsav-dNqaLfdf~G~~LPSl~ 389 (403)
T COG3867 361 YDPENWGEGSAV-DNQALFDFNGHPLPSLN 389 (403)
T ss_pred cCcccccCCCcc-chhhhhhccCCcCcchh
Confidence 122445543222 23347777777765543
No 9
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=94.41 E-value=0.78 Score=40.13 Aligned_cols=41 Identities=20% Similarity=0.109 Sum_probs=32.6
Q ss_pred CCceEEEEEecccccCCCC-------CHHHHHHHHHHHHHHHHhCCCC
Q 025491 21 NNVKFKYIAVGNEAKPGDD-------YAQYLVPAMRNIQNAINGASLG 61 (252)
Q Consensus 21 ~~~~i~~I~VGNEvl~~~~-------~~~~L~~ai~~v~~aL~~~gl~ 61 (252)
....|.++-+.||+..... ....+.+.++.+-++|++.+-.
T Consensus 118 ~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~ 165 (281)
T PF00150_consen 118 DNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPN 165 (281)
T ss_dssp TTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCc
Confidence 4456789999999987532 2367889999999999999864
No 10
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=89.01 E-value=0.13 Score=49.66 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=38.9
Q ss_pred CCCCcEEEcccccCCCCCCCCC-CCHHHH----HHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCCCCCCeeeee
Q 025491 165 GGSLDIVISESGWPTAGGDGAL-TNVDNA----RTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLF 239 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~~a~-as~~na----~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~~~E~~wGlf 239 (252)
+++++|+|||.|++........ -.-..- +.++..+.+.+..|.+ -..+|..++.| ++--+.+..+.|||+
T Consensus 353 Y~~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~----V~GY~~WSl~D-n~Ew~~Gy~~rfGl~ 427 (455)
T PF00232_consen 353 YGNPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDHLNQVLKAIEDGVN----VRGYFAWSLLD-NFEWAEGYKKRFGLV 427 (455)
T ss_dssp HTSSEEEEEEE---EETTCTTSHBSHHHHHHHHHHHHHHHHHHHHTT-E----EEEEEEETSB----BGGGGGGSE--SE
T ss_pred cCCCcEEEecccccccccccccCcCcHHHHHHHHHHHHHHHhhhccCCC----eeeEeeecccc-ccccccCccCccCce
Confidence 5679999999999877642111 111223 4444444444443332 22455555666 333223588999999
Q ss_pred cCC------CCcee
Q 025491 240 APD------KQPKY 247 (252)
Q Consensus 240 ~~~------~~~ky 247 (252)
..| |+||-
T Consensus 428 ~VD~~~~~~R~pK~ 441 (455)
T PF00232_consen 428 YVDFFDTLKRTPKK 441 (455)
T ss_dssp EEETTTTTEEEEBH
T ss_pred EEcCCCCcCeeecc
Confidence 988 66664
No 11
>TIGR03356 BGL beta-galactosidase.
Probab=82.17 E-value=4.2 Score=39.10 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=40.3
Q ss_pred CCCCcEEEcccccCCCCCCCC-CCCHHHHHHHHHHHHHHH----hhcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeee
Q 025491 165 GGSLDIVISESGWPTAGGDGA-LTNVDNARTYNNNLIQHV----KQGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGL 238 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~~a-~as~~na~~y~~~l~~~~----~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGl 238 (252)
+++.||+|||.|+........ ...-+.-..|++.-++.+ ..|.+. ..++.-++.|- .|.. +..+.|||
T Consensus 335 Y~~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v----~GY~~Wsl~Dn~ew~~--gy~~rfGl 408 (427)
T TIGR03356 335 YPGPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDV----RGYFVWSLLDNFEWAE--GYSKRFGL 408 (427)
T ss_pred cCCCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCE----EEEEecccccccchhc--ccccccce
Confidence 445589999999975432100 011122334554444433 444332 24555566663 2543 58999999
Q ss_pred ecCCC
Q 025491 239 FAPDK 243 (252)
Q Consensus 239 f~~~~ 243 (252)
+..|.
T Consensus 409 ~~VD~ 413 (427)
T TIGR03356 409 VHVDY 413 (427)
T ss_pred EEECC
Confidence 98763
No 12
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=79.25 E-value=6.9 Score=38.14 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=40.4
Q ss_pred CCC-CcEEEcccccCCCCCC---CCC---CCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecC-CCCCCCCCCCee
Q 025491 165 GGS-LDIVISESGWPTAGGD---GAL---TNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE-NGKTGPETERHW 236 (252)
Q Consensus 165 ~~~-~~v~v~ETGWPs~G~~---~a~---as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~w 236 (252)
+++ .+|+|||.|+...... +.+ -=++.-+.+++.+.+.+..|.+. ..+|.-++.|- .|.. +.++.|
T Consensus 365 Y~~~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v----~GY~~WSl~DnfEW~~--Gy~~Rf 438 (469)
T PRK13511 365 YPNYKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVISDAISDGANV----KGYFIWSLMDVFSWSN--GYEKRY 438 (469)
T ss_pred cCCCCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCE----EEEeecccccccchhc--CccCcc
Confidence 444 5799999999754321 001 11122344444444444444432 24555666663 2554 589999
Q ss_pred eeecCCC
Q 025491 237 GLFAPDK 243 (252)
Q Consensus 237 Glf~~~~ 243 (252)
||+..|.
T Consensus 439 Gl~~VD~ 445 (469)
T PRK13511 439 GLFYVDF 445 (469)
T ss_pred ceEEECC
Confidence 9998763
No 13
>PLN02998 beta-glucosidase
Probab=78.28 E-value=6.1 Score=38.86 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=40.7
Q ss_pred CCCCcEEEcccccCCCCCC--CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeeeecC
Q 025491 165 GGSLDIVISESGWPTAGGD--GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGLFAP 241 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~--~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGlf~~ 241 (252)
+++.+|+|||-|+....++ .-.-=++.-+.++..+.+.+..|.+. ..+|.-++.|- .|.. +.++.|||++.
T Consensus 390 Y~~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V----~GY~~WSl~DnfEW~~--Gy~~RfGLv~V 463 (497)
T PLN02998 390 YGNPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLRKGSDV----KGYFQWSLMDVFELFG--GYERSFGLLYV 463 (497)
T ss_pred cCCCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCE----EEEeeccchhhhchhc--cccCccceEEE
Confidence 4445899999999865321 00111223344444444444444322 23555556652 2443 58999999977
Q ss_pred CCC
Q 025491 242 DKQ 244 (252)
Q Consensus 242 ~~~ 244 (252)
|..
T Consensus 464 D~~ 466 (497)
T PLN02998 464 DFK 466 (497)
T ss_pred CCC
Confidence 643
No 14
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=75.13 E-value=37 Score=33.45 Aligned_cols=59 Identities=19% Similarity=0.270 Sum_probs=40.9
Q ss_pred HHHHHhccCCC-CCceEEEEEecccccCC------CC----CHHHHHHHHHH-HHHHHHhCCCCCCeeEec
Q 025491 10 TWVQDNVQNFA-NNVKFKYIAVGNEAKPG------DD----YAQYLVPAMRN-IQNAINGASLGSQIKVST 68 (252)
Q Consensus 10 ~wv~~nv~~~~-~~~~i~~I~VGNEvl~~------~~----~~~~L~~ai~~-v~~aL~~~gl~~~I~VsT 68 (252)
+.+...|+.|- .+..|-+|++.||+... -+ +++++..-|++ |.-+|+++|+..++|+=.
T Consensus 208 ~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~ 278 (496)
T PF02055_consen 208 DYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILI 278 (496)
T ss_dssp HHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 33455666663 46899999999999852 11 57778888886 999999999855677744
No 15
>PLN02814 beta-glucosidase
Probab=73.32 E-value=9.3 Score=37.69 Aligned_cols=74 Identities=18% Similarity=0.273 Sum_probs=40.9
Q ss_pred CCCCcEEEcccccCCCCCC--CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeeeecC
Q 025491 165 GGSLDIVISESGWPTAGGD--GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGLFAP 241 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~--~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGlf~~ 241 (252)
+++.||+|||-|+....++ .-.-=++.-+.+++.+.+.+..|.|. ..+|.-++.|- .|.. +.++.|||++.
T Consensus 385 Y~~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V----~GY~~WSllDnfEW~~--Gy~~RfGLvyV 458 (504)
T PLN02814 385 YNNPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIKNGSDT----RGYFVWSMIDLYELLG--GYTTSFGMYYV 458 (504)
T ss_pred cCCCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCE----EEEeeccchhhhchhc--cccCccceEEE
Confidence 4456899999999754321 00111222344444444444444432 24555556662 2543 58999999987
Q ss_pred CCC
Q 025491 242 DKQ 244 (252)
Q Consensus 242 ~~~ 244 (252)
|..
T Consensus 459 D~~ 461 (504)
T PLN02814 459 NFS 461 (504)
T ss_pred CCC
Confidence 644
No 16
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=71.80 E-value=6.4 Score=27.85 Aligned_cols=38 Identities=18% Similarity=0.414 Sum_probs=28.0
Q ss_pred HHHHHHhccCCCCCceEEEEEecccccCCCC----CHHHHHHHHHHHHHHHHhC
Q 025491 9 NTWVQDNVQNFANNVKFKYIAVGNEAKPGDD----YAQYLVPAMRNIQNAINGA 58 (252)
Q Consensus 9 ~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~----~~~~L~~ai~~v~~aL~~~ 58 (252)
..|+++||. .|++.++.++ ....|+|+|+..++.++..
T Consensus 14 i~WLedNi~------------~es~iiFDNded~tdSa~llp~ie~a~~~~r~l 55 (65)
T PF06117_consen 14 IAWLEDNID------------CESDIIFDNDEDKTDSAALLPAIEQARADVRPL 55 (65)
T ss_pred HHHHHcccC------------CCCCeeecCCCcccchHHHHHHHHHHHHHHHHH
Confidence 478888876 3556666543 5678999999999988754
No 17
>PLN02849 beta-glucosidase
Probab=68.90 E-value=14 Score=36.45 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=40.7
Q ss_pred CCCCcEEEcccccCCCCC-CCCC---CCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCCCCCCeeeeec
Q 025491 165 GGSLDIVISESGWPTAGG-DGAL---TNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFA 240 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~-~~a~---as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~~~E~~wGlf~ 240 (252)
+++.||+|+|-|++.... .+.+ -=++.-+.+++.+.+.+..|.+. ..+|.-++.| ++--..+.++.|||+.
T Consensus 383 Y~~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V----~GY~~WSl~D-nfEW~~Gy~~RfGLi~ 457 (503)
T PLN02849 383 YGNPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVRNGSDT----RGYFVWSFMD-LYELLKGYEFSFGLYS 457 (503)
T ss_pred cCCCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCE----EEEeeccchh-hhchhccccCccceEE
Confidence 445589999999986542 1101 11222334444444444444332 2455555665 4332235899999997
Q ss_pred CCCC
Q 025491 241 PDKQ 244 (252)
Q Consensus 241 ~~~~ 244 (252)
.|..
T Consensus 458 VD~~ 461 (503)
T PLN02849 458 VNFS 461 (503)
T ss_pred ECCC
Confidence 7643
No 18
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=66.71 E-value=11 Score=27.80 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=33.7
Q ss_pred CCCCceEEEEEeccc-ccCC--------CC-CHHHHHHHHHHHHHHHHhCCCCCCeeEeccc
Q 025491 19 FANNVKFKYIAVGNE-AKPG--------DD-YAQYLVPAMRNIQNAINGASLGSQIKVSTAI 70 (252)
Q Consensus 19 ~~~~~~i~~I~VGNE-vl~~--------~~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~ 70 (252)
|-...+|.+-=|+|| +... +. ..+.+.+.|+.+-+.+++.+- ..|||+..
T Consensus 5 ~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP--~~pvt~g~ 64 (88)
T PF12876_consen 5 FGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDP--SQPVTSGF 64 (88)
T ss_dssp TT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-T--TS-EE--B
T ss_pred hcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCC--CCcEEeec
Confidence 434578999999999 6521 12 467899999999999999874 67887753
No 19
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=66.20 E-value=16 Score=35.59 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=38.3
Q ss_pred CcEEEcccccCCCCCC--CC---CCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCCCCCCCeeeeecCC
Q 025491 168 LDIVISESGWPTAGGD--GA---LTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPD 242 (252)
Q Consensus 168 ~~v~v~ETGWPs~G~~--~a---~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g~~~E~~wGlf~~~ 242 (252)
.+|+|+|-|....... +. .-=++.-+.|++.+.+.+..|. ++.-|+.--+=+++--..+..+.|||+..|
T Consensus 368 ppi~ItENG~~~~d~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv-----~v~GY~~WSl~Dn~Ew~~Gy~~RfGLv~VD 442 (467)
T TIGR01233 368 KKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGA-----NVKGYFIWSLMDVFSWSNGYEKRYGLFYVD 442 (467)
T ss_pred CCEEEeCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHcCC-----CEEEEeeccchhhhchhccccCccceEEEC
Confidence 3699999999864421 10 1112233444444444443333 444454443334543334589999999776
Q ss_pred C
Q 025491 243 K 243 (252)
Q Consensus 243 ~ 243 (252)
.
T Consensus 443 ~ 443 (467)
T TIGR01233 443 F 443 (467)
T ss_pred C
Confidence 3
No 20
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.89 E-value=35 Score=32.44 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=39.1
Q ss_pred chhhHHHHHHHHHHHHHHHhCCCCCcEEEcccccCCCCCC----CCCCCHHHHHHHHHHHHHHH
Q 025491 144 SYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGD----GALTNVDNARTYNNNLIQHV 203 (252)
Q Consensus 144 ~y~n~fda~~Da~~~a~~k~g~~~~~v~v~ETGWPs~G~~----~a~as~~na~~y~~~l~~~~ 203 (252)
.|.|-|++-+--.-..+.-.|....+|+.| |||.|.- --..|...++..+.++++.+
T Consensus 124 GfNntf~dav~R~aqI~~d~g~~~~pVvFS---WPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~L 184 (377)
T COG4782 124 GFNNTFEDAVYRTAQIVHDSGNDGVPVVFS---WPSRGSLLGYNYDRESTNYSRPALERLLRYL 184 (377)
T ss_pred ccCCchhHHHHHHHHHHhhcCCCcceEEEE---cCCCCeeeecccchhhhhhhHHHHHHHHHHH
Confidence 467777765544444445567778888887 9999972 23566677777777777776
No 21
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=59.46 E-value=38 Score=28.97 Aligned_cols=118 Identities=19% Similarity=0.232 Sum_probs=67.2
Q ss_pred HHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccc
Q 025491 7 EANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSF 86 (252)
Q Consensus 7 ~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f 86 (252)
..++|+.+.+..+ +...+....+- ....-.+++.+..++...|+.| |++.+.......
T Consensus 56 ~~n~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~G-v~l~~~~~~~~~----------- 113 (273)
T PF04909_consen 56 GFNDWLVELAAKH-PDRFIGFAAIP---------PPDPEDAVEELERALQELGFRG-VKLHPDLGGFDP----------- 113 (273)
T ss_dssp HHHHHHHHHHHHS-TTTEEEEEEET---------TTSHHHHHHHHHHHHHTTTESE-EEEESSETTCCT-----------
T ss_pred HHHHHHHHHHHHc-CCCEEEEEEec---------CCCchhHHHHHHHhccccceee-eEecCCCCcccc-----------
Confidence 4467777777777 33233332221 1113367888888888888865 787764322111
Q ss_pred cCCCcchh-HHHHHHHHhcCCCceeccC-ccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhC
Q 025491 87 KQDYKPIL-DPLIAFLNENNSPLLVNLY-PYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAG 164 (252)
Q Consensus 87 ~~~~~~~~-~~~l~fL~~~~d~~~vN~y-Pff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g 164 (252)
+ .+.. .++++.+.+.+=|+.+++- +.+... ..-..+...+...+++
T Consensus 114 --~-~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~---------------------------~~~~~~~~~~~~~~~~-- 161 (273)
T PF04909_consen 114 --D-DPRLDDPIFEAAEELGLPVLIHTGMTGFPDA---------------------------PSDPADPEELEELLER-- 161 (273)
T ss_dssp --T-SGHCHHHHHHHHHHHT-EEEEEESHTHHHHH---------------------------HHHHHHHHHHTTHHHH--
T ss_pred --c-cHHHHHHHHHHHHhhccceeeeccccchhhh---------------------------hHHHHHHHHHHHHHHH--
Confidence 1 1233 4889999999888877743 111100 1111223333334455
Q ss_pred CCCCcEEEcccccC
Q 025491 165 GGSLDIVISESGWP 178 (252)
Q Consensus 165 ~~~~~v~v~ETGWP 178 (252)
+++++|++.+.|+|
T Consensus 162 ~P~l~ii~~H~G~~ 175 (273)
T PF04909_consen 162 FPDLRIILAHLGGP 175 (273)
T ss_dssp STTSEEEESGGGTT
T ss_pred hcCCeEEEecCccc
Confidence 58999999999999
No 22
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=57.75 E-value=52 Score=28.80 Aligned_cols=41 Identities=15% Similarity=0.222 Sum_probs=25.6
Q ss_pred HHHhCCCCCcEEEcccccCCCCCC----CCCCCHHHHHHHHHHHHHHH
Q 025491 160 LEKAGGGSLDIVISESGWPTAGGD----GALTNVDNARTYNNNLIQHV 203 (252)
Q Consensus 160 ~~k~g~~~~~v~v~ETGWPs~G~~----~a~as~~na~~y~~~l~~~~ 203 (252)
...+++++..|+.+ |||.|.. ....+...+...+..+++.+
T Consensus 42 ~~~~~~~~~~i~Fs---WPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L 86 (233)
T PF05990_consen 42 AHDLGFPGVVILFS---WPSDGSLLGYFYDRESARFSGPALARFLRDL 86 (233)
T ss_pred HHHhCCCceEEEEE---cCCCCChhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 34566777555554 9999973 23445555666666666665
No 23
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=57.52 E-value=1.3e+02 Score=28.07 Aligned_cols=55 Identities=13% Similarity=0.031 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHHHHHHhcCCCceeccCcc
Q 025491 41 AQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPY 115 (252)
Q Consensus 41 ~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPf 115 (252)
...+...++.++..|++.. .+.+|+|-.... +.. . +.. . .+.+..|.+..|.||.
T Consensus 208 ~~~~~~~~~~~~~~ir~~~--p~~~vt~n~~~~-~~~-----------~----~d~-~-~~a~~~D~~~~d~Y~~ 262 (374)
T PF02449_consen 208 SDRVAEFFRWQADIIREYD--PDHPVTTNFMGS-WFN-----------G----IDY-F-KWAKYLDVVSWDSYPD 262 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHS--TT-EEE-EE-TT---------------S----S-H-H-HHGGGSSSEEEEE-HH
T ss_pred HHHHHHHHHHHHHHHHHhC--CCceEEeCcccc-ccC-----------c----CCH-H-HHHhhCCcceeccccC
Confidence 4457788889999999986 357888754221 000 0 111 1 2567889999999998
No 24
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
Probab=57.47 E-value=11 Score=34.98 Aligned_cols=144 Identities=15% Similarity=0.224 Sum_probs=57.8
Q ss_pred HHHHHHHhccCCC-----CCceEEEEEecccccCCC---C-CHHHHHHHHHHHHHHHHhCCCC---CCeeEecccccccc
Q 025491 8 ANTWVQDNVQNFA-----NNVKFKYIAVGNEAKPGD---D-YAQYLVPAMRNIQNAINGASLG---SQIKVSTAIELGAL 75 (252)
Q Consensus 8 a~~wv~~nv~~~~-----~~~~i~~I~VGNEvl~~~---~-~~~~L~~ai~~v~~aL~~~gl~---~~I~VsT~~~~~~l 75 (252)
.-.|=.+|.+.++ .+-+|..-=.|||.-..+ . ++.++......+|+.|+.. +. .+-+|.-+..
T Consensus 144 ~g~WnssNA~~Ll~Yt~skgy~I~~WELGNEl~g~g~~~~v~a~qyakD~~~Lr~il~~i-y~~~~~~P~v~gP~~---- 218 (319)
T PF03662_consen 144 DGSWNSSNAQSLLKYTASKGYNIDSWELGNELNGSGVGASVSAEQYAKDFIQLRKILNEI-YKNALPGPLVVGPGG---- 218 (319)
T ss_dssp HHHHHHH-TTTEEEEEESS-GGG--------HHHHSSSTT--HHHHHHHH---HHHHHHH-HHH-TT---EEEEEE----
T ss_pred CCCCChHHHHHHHHHHHHcCCCccccccccccCCCCCCCccCHHHHHHHHHHHHHHHHHH-HhcCCCCCeEECCCC----
Confidence 4578777776653 345788888999976433 2 6888999999999988763 10 0123433321
Q ss_pred cccCCCCCccccCCCcchhHHHHHHHHh-cCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHH
Q 025491 76 DASSPPSAGSFKQDYKPILDPLIAFLNE-NNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLD 154 (252)
Q Consensus 76 ~~s~pPs~~~f~~~~~~~~~~~l~fL~~-~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~D 154 (252)
.|.. ..+++.|+-.-+ ..|.+.-|+|+. ....+... ++. .-++ .|-+.+..++.
T Consensus 219 ---------~~d~---~w~~~FL~~~g~~~vD~vT~H~Y~l-g~g~d~~l-~~~---------~l~p--~~Ld~~~~~~~ 273 (319)
T PF03662_consen 219 ---------FFDA---DWLKEFLKASGPGVVDAVTWHHYNL-GSGRDPAL-IED---------FLNP--SYLDTLADTFQ 273 (319)
T ss_dssp ---------SS-G---GGHHHHHHHTTTT--SEEEEEEEEE---TT-TT--HHH---------HTS----HHHHHHHHHH
T ss_pred ---------CCCH---HHHHHHHHhcCCCccCEEEEEecCC-CCCchHHH-HHH---------hcCh--hhhhHHHHHHH
Confidence 1121 334444433333 256777777753 21111110 010 0011 12233333444
Q ss_pred HHHHHHHHhCCCCCcEEEcccccCCCCC
Q 025491 155 ATYAALEKAGGGSLDIVISESGWPTAGG 182 (252)
Q Consensus 155 a~~~a~~k~g~~~~~v~v~ETGWPs~G~ 182 (252)
.+...+++.+ ++++++++|||=...|+
T Consensus 274 ~~~~~v~~~~-p~~~~WlGEtg~Ay~gG 300 (319)
T PF03662_consen 274 KLQQVVQEYG-PGKPVWLGETGSAYNGG 300 (319)
T ss_dssp HHH-----HH-H---EEEEEEEEESTT-
T ss_pred HHhhhhcccC-CCCCeEEeCcccccCCC
Confidence 4444444444 68999999999766565
No 25
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=55.51 E-value=49 Score=32.72 Aligned_cols=184 Identities=17% Similarity=0.131 Sum_probs=103.7
Q ss_pred HHHHHHhccCCCCCceEEEEEecccccCCCC-CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCcccc
Q 025491 9 NTWVQDNVQNFANNVKFKYIAVGNEAKPGDD-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFK 87 (252)
Q Consensus 9 ~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~ 87 (252)
.+.|.+=|.||-....|.+-..-||.|.+-+ +...++.-.+.+.+-|+..+-+ --|+.-+....+.. |.|-.+.
T Consensus 123 kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~--hlvsvGD~~sp~~~-~~pyN~r-- 197 (587)
T COG3934 123 KKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDG--HLVSVGDPASPWPQ-YAPYNAR-- 197 (587)
T ss_pred HHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhccCCC--CeeecCCcCCcccc-cCCcccc--
Confidence 5677777888866678888899999887656 7888888888888888887743 33444433322221 1221221
Q ss_pred CCCcchhHHHHHHHHhcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCC
Q 025491 88 QDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGS 167 (252)
Q Consensus 88 ~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~ 167 (252)
.+.|+-..++||+|+. + + |+.. +..|-. ..+|-. .-+ +-
T Consensus 198 ---------------~~vDya~~hLY~hyd~--s----l-~~r~----------s~~yg~---~~l~i~----~~~--g~ 236 (587)
T COG3934 198 ---------------FYVDYAANHLYRHYDT--S----L-VSRV----------STVYGK---PYLDIP----TIM--GW 236 (587)
T ss_pred ---------------eeeccccchhhhhccC--C----h-hhee----------eeeecc---hhhccc----hhc--cc
Confidence 2558888999997752 1 1 1110 001111 001100 112 23
Q ss_pred CcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCCCceEEEEEeecCCCCC--C--CCCCCeeeeecCC
Q 025491 168 LDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV-KQGSPKKPRPIETYIFAMFDENGKT--G--PETERHWGLFAPD 242 (252)
Q Consensus 168 ~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~-~~gtp~r~~~~~~~~F~~fde~~K~--g--~~~E~~wGlf~~~ 242 (252)
++|+.-|-|-|++-+. ++...|+-.+...+ ..| .+.-+.+|+=|-+--.. . ...|-.|||.+.|
T Consensus 237 ~pV~leefGfsta~g~------e~s~ayfiw~~lal~~gg-----dGaLiwclsdf~~gsdd~ey~w~p~el~fgiIrad 305 (587)
T COG3934 237 QPVNLEEFGFSTAFGQ------ENSPAYFIWIRLALDTGG-----DGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRAD 305 (587)
T ss_pred ceeeccccCCcccccc------cccchhhhhhhhHHhhcC-----CceEEEEecCCccCCCCCCCccccccceeeeecCC
Confidence 8999999999987654 12223332222222 111 13344455544321111 1 2478899999999
Q ss_pred CCceeec
Q 025491 243 KQPKYQV 249 (252)
Q Consensus 243 ~~~ky~~ 249 (252)
+.+|++.
T Consensus 306 gpek~~a 312 (587)
T COG3934 306 GPEKIDA 312 (587)
T ss_pred CchhhhH
Confidence 9999854
No 26
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=54.19 E-value=81 Score=30.89 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=40.8
Q ss_pred CcEEEcccccCCCCCC---CCC---CCHHHHHHHHHHHHHHHh-hcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeeee
Q 025491 168 LDIVISESGWPTAGGD---GAL---TNVDNARTYNNNLIQHVK-QGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGLF 239 (252)
Q Consensus 168 ~~v~v~ETGWPs~G~~---~a~---as~~na~~y~~~l~~~~~-~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGlf 239 (252)
+||+|+|-|....... +.+ -=++.-+.|++.+.+.+. .|.+. ..+|.-++.|- .|.. ++.++.|||+
T Consensus 369 ~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v----~GY~~WSl~Dn~EW~~-G~y~~RfGl~ 443 (478)
T PRK09593 369 KPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAINEDGVEL----LGYTTWGCIDLVSAGT-GEMKKRYGFI 443 (478)
T ss_pred CCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCE----EEEeeccchHhhcccC-CCccCeeceE
Confidence 5899999999754421 001 113344555555555553 45432 23555556653 2443 3488999999
Q ss_pred cCCCC
Q 025491 240 APDKQ 244 (252)
Q Consensus 240 ~~~~~ 244 (252)
..|..
T Consensus 444 ~VD~~ 448 (478)
T PRK09593 444 YVDRD 448 (478)
T ss_pred EECCC
Confidence 87643
No 27
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=51.32 E-value=15 Score=33.84 Aligned_cols=184 Identities=18% Similarity=0.189 Sum_probs=96.5
Q ss_pred HHHHHHHHhccCCCCC-ceEEEEEecccccCCCC--------------CHHHHHHHHHHHHHHHHhCCCCCCeeEecccc
Q 025491 7 EANTWVQDNVQNFANN-VKFKYIAVGNEAKPGDD--------------YAQYLVPAMRNIQNAINGASLGSQIKVSTAIE 71 (252)
Q Consensus 7 ~a~~wv~~nv~~~~~~-~~i~~I~VGNEvl~~~~--------------~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~ 71 (252)
..++++++-+..| .+ -+|...-|=||++..+. -.+.+..+.+-.|++... ++.-.-+
T Consensus 107 ~l~~~I~~v~~~y-~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~------a~L~~ND- 178 (320)
T PF00331_consen 107 RLENHIKTVVTRY-KDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPN------AKLFYND- 178 (320)
T ss_dssp HHHHHHHHHHHHT-TTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTT------SEEEEEE-
T ss_pred HHHHHHHHHHhHh-ccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCC------cEEEecc-
Confidence 3446676665666 44 48999999999997531 123566677777777643 3333222
Q ss_pred cccccccCCCCCccccCCCcchhHHHHHHHHhcCCC---ceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhH
Q 025491 72 LGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSP---LLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNL 148 (252)
Q Consensus 72 ~~~l~~s~pPs~~~f~~~~~~~~~~~l~fL~~~~d~---~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~ 148 (252)
.+++. + .-+..+..+++.|.+.+-| +++-.| |.. . +.
T Consensus 179 y~~~~----~-------~k~~~~~~lv~~l~~~gvpIdgIG~Q~H--~~~---------------------~----~~-- 218 (320)
T PF00331_consen 179 YNIES----P-------AKRDAYLNLVKDLKARGVPIDGIGLQSH--FDA---------------------G----YP-- 218 (320)
T ss_dssp SSTTS----T-------HHHHHHHHHHHHHHHTTHCS-EEEEEEE--EET---------------------T----SS--
T ss_pred ccccc----h-------HHHHHHHHHHHHHHhCCCccceechhhc--cCC---------------------C----CC--
Confidence 11111 1 0023455677777766444 222222 110 0 00
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCC-CCceEEEEE-eecCC-
Q 025491 149 FYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFA-MFDEN- 225 (252)
Q Consensus 149 fda~~Da~~~a~~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~-~~~~~~~F~-~fde~- 225 (252)
.+.+..+|+++..-|++|.|||--=............+.+..+++.+++.+.+ .| ..+.-+.+- +.|..
T Consensus 219 ----~~~i~~~l~~~~~~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~----~~~~~v~git~Wg~~D~~s 290 (320)
T PF00331_consen 219 ----PEQIWNALDRFASLGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFS----HPPAAVEGITWWGFTDGYS 290 (320)
T ss_dssp ----HHHHHHHHHHHHTTTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHH----TTHCTEEEEEESSSBTTGS
T ss_pred ----HHHHHHHHHHHHHcCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHh----CCccCCCEEEEECCCCCCc
Confidence 33344555666555799999997543333221134456678889999988832 12 134444444 55543
Q ss_pred CCCCCCCCCeeeeecCCCCcee
Q 025491 226 GKTGPETERHWGLFAPDKQPKY 247 (252)
Q Consensus 226 ~K~g~~~E~~wGlf~~~~~~ky 247 (252)
|.+... -.+=+||+.|.+||-
T Consensus 291 W~~~~~-~~~~~lfd~~~~~Kp 311 (320)
T PF00331_consen 291 WRPDTP-PDRPLLFDEDYQPKP 311 (320)
T ss_dssp TTGGHS-EG--SSB-TTSBB-H
T ss_pred ccCCCC-CCCCeeECCCcCCCH
Confidence 665211 233579999999984
No 28
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=51.12 E-value=40 Score=32.99 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=41.0
Q ss_pred CCcEEEcccccCCCCCC---CCC---CCHHHHHHHHHHHHHHH-hhcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeee
Q 025491 167 SLDIVISESGWPTAGGD---GAL---TNVDNARTYNNNLIQHV-KQGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGL 238 (252)
Q Consensus 167 ~~~v~v~ETGWPs~G~~---~a~---as~~na~~y~~~l~~~~-~~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGl 238 (252)
++||+|+|-|....... +.+ -=++.-+.+++.+.+.+ ..|.+. ..+|.-++.|- .|.. +...+.|||
T Consensus 367 ~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~V----~GY~~WSl~Dn~Ew~~-G~y~~RfGl 441 (476)
T PRK09589 367 QLPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKAVVEDGVDL----MGYTPWGCIDLVSAGT-GEMKKRYGF 441 (476)
T ss_pred CCCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHHHHhcCCCe----EEEeeccccccccccC-Cccccceee
Confidence 36899999999754321 001 11223344555555554 445433 24566666663 2443 237899999
Q ss_pred ecCCCC
Q 025491 239 FAPDKQ 244 (252)
Q Consensus 239 f~~~~~ 244 (252)
++.|..
T Consensus 442 v~VD~~ 447 (476)
T PRK09589 442 IYVDKD 447 (476)
T ss_pred EEEcCC
Confidence 977644
No 29
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=48.98 E-value=1.9e+02 Score=28.14 Aligned_cols=180 Identities=17% Similarity=0.199 Sum_probs=84.3
Q ss_pred EEEecccccCCC---C-CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHHHHHH
Q 025491 27 YIAVGNEAKPGD---D-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLN 102 (252)
Q Consensus 27 ~I~VGNEvl~~~---~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l~fL~ 102 (252)
..=|=||+=... . ...+-....+....+|+++. +.++|+-+-.. + + ....+...++|+.
T Consensus 158 ~fEiWNEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~--p~~~vGGp~~~--~--~-----------~~~~~~~~l~~~~ 220 (486)
T PF01229_consen 158 YFEIWNEPDLKDFWWDGTPEEYFELYDATARAIKAVD--PELKVGGPAFA--W--A-----------YDEWCEDFLEFCK 220 (486)
T ss_dssp EEEESS-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH---TTSEEEEEEEE--T--T------------THHHHHHHHHHH
T ss_pred eEEeCcCCCcccccCCCCHHHHHHHHHHHHHHHHHhC--CCCcccCcccc--c--c-----------HHHHHHHHHHHHh
Confidence 445789964432 1 34567777788888888876 46899876110 0 0 0133556667765
Q ss_pred h---cCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCcEEEcccccCC
Q 025491 103 E---NNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPT 179 (252)
Q Consensus 103 ~---~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~v~v~ETGWPs 179 (252)
+ .-|++..+.||.-..... .-.. . ... .....++.... .+...+...+.+++++.++| |.+
T Consensus 221 ~~~~~~DfiS~H~y~~~~~~~~---~~~~-----~-~~~----~~~~~~~~~~~-~~~~~~~~e~~p~~~~~~tE--~n~ 284 (486)
T PF01229_consen 221 GNNCPLDFISFHSYGTDSAEDI---NENM-----Y-ERI----EDSRRLFPELK-ETRPIINDEADPNLPLYITE--WNA 284 (486)
T ss_dssp HCT---SEEEEEEE-BESESE----SS-E-----E-EEB------HHHHHHHHH-HHHHHHHTSSSTT--EEEEE--EES
T ss_pred cCCCCCCEEEEEeccccccccc---chhH-----H-hhh----hhHHHHHHHHH-HHHHHHhhccCCCCceeecc--ccc
Confidence 5 347778888885321100 0000 0 000 01122222222 22233455567889999999 776
Q ss_pred CCCC--CCCCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEE----eecCCCCCCCCCCCeeeeecCCCCce
Q 025491 180 AGGD--GALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFA----MFDENGKTGPETERHWGLFAPDKQPK 246 (252)
Q Consensus 180 ~G~~--~a~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~----~fde~~K~g~~~E~~wGlf~~~~~~k 246 (252)
.-.. .-.-|.-+|.-..+++++..+. .++.|-+- .|.|.-.+...+-..|||+..+|-+|
T Consensus 285 ~~~~~~~~~dt~~~aA~i~k~lL~~~~~-------~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~gI~K 350 (486)
T PF01229_consen 285 SISPRNPQHDTCFKAAYIAKNLLSNDGA-------FLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKLGIPK 350 (486)
T ss_dssp -SSTT-GGGGSHHHHHHHHH-HHHHGGG-------T-SEEEES-SBS---TTSS-SSSSSS-S-SEECCCEE-
T ss_pred ccCCCcchhccccchhhHHHHHHHhhhh-------hhhhhhccchhhhhhccCCCCCceecchhhhhccCCCc
Confidence 5542 1123445555555556666531 23433332 34343333334667799999998665
No 30
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=48.72 E-value=46 Score=32.61 Aligned_cols=73 Identities=14% Similarity=0.246 Sum_probs=38.5
Q ss_pred CCcEEEcccccCCCCCC---CCCC---CHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCCCC-CCCCCeeeee
Q 025491 167 SLDIVISESGWPTAGGD---GALT---NVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTG-PETERHWGLF 239 (252)
Q Consensus 167 ~~~v~v~ETGWPs~G~~---~a~a---s~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K~g-~~~E~~wGlf 239 (252)
++||+|+|-|....... +.+- =++.-+.+++.+.+.+..|.+. ..+|.-++.| ++.-. +...+.|||+
T Consensus 365 ~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~V----~GY~~WSl~D-n~Ew~~G~y~~RfGLv 439 (474)
T PRK09852 365 QKPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAIADGIPL----MGYTTWGCID-LVSASTGEMSKRYGFV 439 (474)
T ss_pred CCCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCE----EEEEeecccc-cccccCCCccceeeeE
Confidence 36899999998754321 1011 1122334444444444444322 2345555555 43322 3378999999
Q ss_pred cCCCC
Q 025491 240 APDKQ 244 (252)
Q Consensus 240 ~~~~~ 244 (252)
..|..
T Consensus 440 ~VD~~ 444 (474)
T PRK09852 440 YVDRD 444 (474)
T ss_pred EECCC
Confidence 87643
No 31
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=47.66 E-value=40 Score=33.01 Aligned_cols=72 Identities=15% Similarity=0.169 Sum_probs=39.5
Q ss_pred CCcEEEcccccCCCCCC-CCC-----CCHHHHHHHHHHHHHHHh-hcCCCCCCCceEEEEEeecC-CCCCCCCCCCeeee
Q 025491 167 SLDIVISESGWPTAGGD-GAL-----TNVDNARTYNNNLIQHVK-QGSPKKPRPIETYIFAMFDE-NGKTGPETERHWGL 238 (252)
Q Consensus 167 ~~~v~v~ETGWPs~G~~-~a~-----as~~na~~y~~~l~~~~~-~gtp~r~~~~~~~~F~~fde-~~K~g~~~E~~wGl 238 (252)
++||+|+|-|....... ... -=++.-+.+++.+.+.+. .|.+. ..+|.-++.|- .|.. ++..+.|||
T Consensus 368 ~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~~dGv~v----~GY~~WSl~DnfEw~~-G~y~~RfGl 442 (477)
T PRK15014 368 QKPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDL----MGYTPWGCIDCVSFTT-GQYSKRYGF 442 (477)
T ss_pred CCCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHHHHcCCCE----EEEeeccchhhhcccC-CCccCccce
Confidence 36899999999864321 001 112233444444444442 44432 23555556653 2543 348899999
Q ss_pred ecCCC
Q 025491 239 FAPDK 243 (252)
Q Consensus 239 f~~~~ 243 (252)
+..|.
T Consensus 443 ~~VD~ 447 (477)
T PRK15014 443 IYVNK 447 (477)
T ss_pred EEECC
Confidence 97653
No 32
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=46.33 E-value=1.1e+02 Score=29.21 Aligned_cols=49 Identities=20% Similarity=0.303 Sum_probs=31.9
Q ss_pred CceEEEEEecccccCC---C--C----CHHHHHHHHHHHHHHHHhCCCCCCeeEeccccc
Q 025491 22 NVKFKYIAVGNEAKPG---D--D----YAQYLVPAMRNIQNAINGASLGSQIKVSTAIEL 72 (252)
Q Consensus 22 ~~~i~~I~VGNEvl~~---~--~----~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~ 72 (252)
+..|++|.-=||+-.. + + ..++....|+.|+.+|++.||.. +|+..++.
T Consensus 171 GI~f~~IsP~NEP~~~W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t--~I~~~Ea~ 228 (384)
T PF14587_consen 171 GINFDYISPFNEPQWNWAGGSQEGCHFTNEEQADVIRALDKALKKRGLST--KISACEAG 228 (384)
T ss_dssp T--EEEEE--S-TTS-GG--SS-B----HHHHHHHHHHHHHHHHHHT-S---EEEEEEES
T ss_pred CCccceeCCcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCc--eEEecchh
Confidence 5799999999999864 1 1 57788999999999999999965 56666553
No 33
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=45.28 E-value=43 Score=31.22 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=61.9
Q ss_pred HHHHHHHHHH-HHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHHHHHHhcCCCceeccCccccccC
Q 025491 42 QYLVPAMRNI-QNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120 (252)
Q Consensus 42 ~~L~~ai~~v-~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~ 120 (252)
-.+...|.+- |..+..-||..-|-.-|-.+++.-+..|.|.+|.=. +| +..|.+-+..=---++
T Consensus 113 ~ei~e~iEnttR~li~e~gl~aGi~FPtG~SlN~cAAHyTpNaGd~t---------VL----qydDV~KiDfGthi~G-- 177 (397)
T KOG2775|consen 113 IEICETIENTTRKLILENGLNAGIGFPTGCSLNHCAAHYTPNAGDKT---------VL----KYDDVMKIDFGTHIDG-- 177 (397)
T ss_pred HHHHHHHHHHHHHHHHhccccccccCCCcccccchhhhcCCCCCCce---------ee----eecceEEEeccccccC--
Confidence 3455555543 446667778766778888888888888999988521 11 2334444332111111
Q ss_pred CCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCCcEEEcccc
Q 025491 121 DRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESG 176 (252)
Q Consensus 121 ~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~~v~v~ETG 176 (252)
+-|...| ++..+ -.|.+|+.|.-|+.+.-++.+| +.|.+.+.|
T Consensus 178 -rIiDsAF-------Tv~F~--p~~d~Ll~AvreaT~tGIkeaG---iDvRlcdiG 220 (397)
T KOG2775|consen 178 -RIIDSAF-------TVAFN--PKYDPLLAAVREATNTGIKEAG---IDVRLCDIG 220 (397)
T ss_pred -eEeeeee-------EEeeC--ccccHHHHHHHHHHhhhhhhcC---ceeeehhhh
Confidence 1111111 01111 2478888888888888777664 677777665
No 34
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=44.70 E-value=63 Score=32.13 Aligned_cols=74 Identities=16% Similarity=0.320 Sum_probs=46.3
Q ss_pred HhCCCCCcEEEcccccCCCCCC--------CCCCCHHHHHHHHHHHHHHHh-hcCCCCCCCceEEEEEeecC-CCCCCCC
Q 025491 162 KAGGGSLDIVISESGWPTAGGD--------GALTNVDNARTYNNNLIQHVK-QGSPKKPRPIETYIFAMFDE-NGKTGPE 231 (252)
Q Consensus 162 k~g~~~~~v~v~ETGWPs~G~~--------~a~as~~na~~y~~~l~~~~~-~gtp~r~~~~~~~~F~~fde-~~K~g~~ 231 (252)
|-.++|.+|.|+|-|-+...+. .-..=++..+.|++.+.+.+. .|. +-..+|..++-|- .|.. +
T Consensus 402 K~~Y~np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dgv----nv~GYf~WSLmDnfEw~~--G 475 (524)
T KOG0626|consen 402 KDKYGNPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDGV----NVKGYFVWSLLDNFEWLD--G 475 (524)
T ss_pred HhhcCCCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcCC----ceeeEEEeEcccchhhhc--C
Confidence 3347899999999999886542 112333445556666665552 221 1346777777763 3654 5
Q ss_pred CCCeeeeecC
Q 025491 232 TERHWGLFAP 241 (252)
Q Consensus 232 ~E~~wGlf~~ 241 (252)
..-.|||++-
T Consensus 476 y~~RFGlyyV 485 (524)
T KOG0626|consen 476 YKVRFGLYYV 485 (524)
T ss_pred cccccccEEE
Confidence 6689999974
No 35
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=44.33 E-value=2.4e+02 Score=25.56 Aligned_cols=122 Identities=17% Similarity=0.223 Sum_probs=68.8
Q ss_pred HHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccC
Q 025491 9 NTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQ 88 (252)
Q Consensus 9 ~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~ 88 (252)
++|+.+.+..| |+ +++..++....+. -.+...+..++++.|.-+ +++.... ..+.|+
T Consensus 86 nd~~a~~~~~~-pd---rf~~~~~v~p~~~------~~a~~E~er~v~~~gf~g-~~l~p~~------~~~~~~------ 142 (293)
T COG2159 86 NDDLAALAAEY-PD---RFVGFARVDPRDP------EAAAEELERRVRELGFVG-VKLHPVA------QGFYPD------ 142 (293)
T ss_pred hHHHHHHHhhC-Cc---ceeeeeeeCCCch------HHHHHHHHHHHHhcCceE-EEecccc------cCCCCC------
Confidence 67888888777 65 5555555554431 235566677777777633 5543322 111121
Q ss_pred CCcchhHHHHHHHHhcCCCceeccCccccccCCCCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHHHHhCCCCC
Q 025491 89 DYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSL 168 (252)
Q Consensus 89 ~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~~k~g~~~~ 168 (252)
.+...++.++..+.+-|+.++.=+.... ..+.... .+. ..+|-+ +.+ ++++
T Consensus 143 --~~~~~pi~~~a~~~gvpv~ihtG~~~~~-----~~~~~~~--------~~p---------~~~~~v---a~~--fP~l 193 (293)
T COG2159 143 --DPRLYPIYEAAEELGVPVVIHTGAGPGG-----AGLEKGH--------SDP---------LYLDDV---ARK--FPEL 193 (293)
T ss_pred --ChHHHHHHHHHHHcCCCEEEEeCCCCCC-----cccccCC--------CCc---------hHHHHH---HHH--CCCC
Confidence 2446888999999999999954443221 1111000 000 123333 234 6899
Q ss_pred cEEEcccc--cCCCCC
Q 025491 169 DIVISESG--WPTAGG 182 (252)
Q Consensus 169 ~v~v~ETG--WPs~G~ 182 (252)
+||+++.| +|..-.
T Consensus 194 ~IVl~H~G~~~p~~~~ 209 (293)
T COG2159 194 KIVLGHMGEDYPWELE 209 (293)
T ss_pred cEEEEecCCCCchhHH
Confidence 99999999 886554
No 36
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=39.23 E-value=3e+02 Score=25.08 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=25.5
Q ss_pred cCCCcchhHHHHHHHHhcCCCceeccCcccc
Q 025491 87 KQDYKPILDPLIAFLNENNSPLLVNLYPYFA 117 (252)
Q Consensus 87 ~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~ 117 (252)
+++.-+-.+.+++-|.+.+=-+++++.|+..
T Consensus 65 d~~~FPdp~~mi~~L~~~G~k~~~~v~P~v~ 95 (317)
T cd06598 65 DRKAFPDPAGMIADLAKKGVKTIVITEPFVL 95 (317)
T ss_pred ccccCCCHHHHHHHHHHcCCcEEEEEcCccc
Confidence 3444466788999999999999999999975
No 37
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=37.65 E-value=1.1e+02 Score=27.67 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=34.7
Q ss_pred eEEEEEecccccCCCC---CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccccCCCcchhHHHHHH
Q 025491 24 KFKYIAVGNEAKPGDD---YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAF 100 (252)
Q Consensus 24 ~i~~I~VGNEvl~~~~---~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~~~~~~~~~~~l~f 100 (252)
...-|+||+|+|.+.. .+.. +-+.|...|+ +++--|.. . |+ -..|...++.
T Consensus 3 ~a~iI~vG~ElL~G~ivdtNa~~-------la~~L~~~G~--~v~~~~~V-g---------------D~-~~~I~~~l~~ 56 (255)
T COG1058 3 KAEIIAVGDELLSGRIVDTNAAF-------LADELTELGV--DLARITTV-G---------------DN-PDRIVEALRE 56 (255)
T ss_pred eEEEEEEccceecCceecchHHH-------HHHHHHhcCc--eEEEEEec-C---------------CC-HHHHHHHHHH
Confidence 4578999999998643 3443 3456777787 34322221 0 11 1345666777
Q ss_pred HHhcCCCc
Q 025491 101 LNENNSPL 108 (252)
Q Consensus 101 L~~~~d~~ 108 (252)
+.+..|++
T Consensus 57 a~~r~D~v 64 (255)
T COG1058 57 ASERADVV 64 (255)
T ss_pred HHhCCCEE
Confidence 76666666
No 38
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=34.06 E-value=31 Score=32.98 Aligned_cols=18 Identities=44% Similarity=0.746 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHhccCCCC
Q 025491 4 NQAEANTWVQDNVQNFAN 21 (252)
Q Consensus 4 ~~~~a~~wv~~nv~~~~~ 21 (252)
|+-.|.+||++||..|.+
T Consensus 188 Dq~~AL~WV~~nI~~FGG 205 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGG 205 (535)
T ss_dssp HHHHHHHHHHHHGGGGTE
T ss_pred hhHHHHHHHHhhhhhccc
Confidence 567899999999999953
No 39
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=33.04 E-value=30 Score=32.99 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=20.0
Q ss_pred CCCCcEEEcccccCCCCCCCCCCCHHHHHHHH
Q 025491 165 GGSLDIVISESGWPTAGGDGALTNVDNARTYN 196 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~ 196 (252)
..|+.|+|-| |..|+..+..-|+.++...
T Consensus 194 ~~~~gI~IMe---P~~gG~l~~~vP~~~~~l~ 222 (391)
T COG1453 194 SKGLGIFIME---PLDGGGLLYNVPEKLEELC 222 (391)
T ss_pred hCCCcEEEEe---eCCCCCcccCCCHHHHHHH
Confidence 4689999999 9999874443445555433
No 40
>PF13547 GTA_TIM: GTA TIM-barrel-like domain
Probab=32.27 E-value=71 Score=29.39 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=54.4
Q ss_pred CceEEEEEecccccC----CC---C--CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCc----cccC
Q 025491 22 NVKFKYIAVGNEAKP----GD---D--YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAG----SFKQ 88 (252)
Q Consensus 22 ~~~i~~I~VGNEvl~----~~---~--~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~----~f~~ 88 (252)
...|...+||+|-.. ++ . .++.|...+..||+.| | ..+|||.+-.|+-+.. +.|..| .|+
T Consensus 17 aggVdaF~IGSEl~gLT~iR~~~~~fPaV~~l~~LAa~VR~il---G--~~~kitYAADWsEY~~-~~p~dg~gd~~f~- 89 (299)
T PF13547_consen 17 AGGVDAFCIGSELRGLTRIRDGAGSFPAVEALRALAADVRAIL---G--PGTKITYAADWSEYFG-YQPADGSGDVYFH- 89 (299)
T ss_pred cCCCcEEEEchhhhhheeecCCCCCCcHHHHHHHHHHHHHHHh---C--CCceEEEeccCHHhcC-cCCCCCCCccccc-
Confidence 456899999999753 21 1 3567888888888887 3 3579999988776643 445444 333
Q ss_pred CCcchhHHHHHHHHhcCCCceeccCcccc
Q 025491 89 DYKPILDPLIAFLNENNSPLLVNLYPYFA 117 (252)
Q Consensus 89 ~~~~~~~~~l~fL~~~~d~~~vN~yPff~ 117 (252)
|.|+. -....|+++|+.|.=.+
T Consensus 90 -----LDpLW--a~~~IDfIGID~Y~PLS 111 (299)
T PF13547_consen 90 -----LDPLW--ADPNIDFIGIDNYFPLS 111 (299)
T ss_pred -----Ccccc--cCCcCCEEEeecccccC
Confidence 33332 33566999999985443
No 41
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=31.33 E-value=2e+02 Score=26.12 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHhccCCCCCceEEEEEecc-cccCC-C-C-CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccc
Q 025491 2 ASNQAEANTWVQDNVQNFANNVKFKYIAVGN-EAKPG-D-D-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDA 77 (252)
Q Consensus 2 a~~~~~a~~wv~~nv~~~~~~~~i~~I~VGN-Evl~~-~-~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~ 77 (252)
++++...+.+++ ++..++....+.+|-+-- |.... + . .-..++.-|+.+|++|.+.|+ .+-++.+-....
T Consensus 87 ~~~~~~R~~fi~-s~~~~~~~~~~DGidiD~we~p~~~~~~~d~~~~~~~l~el~~~l~~~~~--~l~~~v~~~~~~--- 160 (318)
T cd02876 87 LNDEQEREKLIK-LLVTTAKKNHFDGIVLEVWSQLAAYGVPDKRKELIQLVIHLGETLHSANL--KLILVIPPPREK--- 160 (318)
T ss_pred HcCHHHHHHHHH-HHHHHHHHcCCCcEEEechhhhcccCCHHHHHHHHHHHHHHHHHHhhcCC--EEEEEEcCcccc---
Confidence 345454445544 444443333455555431 22111 1 1 345688999999999998775 233433211100
Q ss_pred cCCCCCccccCCCcchhHHHHHHHHhcCCCceeccCcccc
Q 025491 78 SSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFA 117 (252)
Q Consensus 78 s~pPs~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~ 117 (252)
.+....+. . --+.-|++..|++.|-.|=|..
T Consensus 161 --~~~~~~~~----~---~d~~~l~~~vD~v~lMtYD~~~ 191 (318)
T cd02876 161 --GNQNGLFT----R---KDFEKLAPHVDGFSLMTYDYSS 191 (318)
T ss_pred --cccccccc----c---cCHHHHHhhccEEEEEeeccCC
Confidence 00000111 0 0123467778999999998754
No 42
>PF14903 WG_beta_rep: WG containing repeat
Probab=30.17 E-value=37 Score=19.84 Aligned_cols=16 Identities=13% Similarity=0.468 Sum_probs=12.6
Q ss_pred eeeecCCCCceeeccc
Q 025491 236 WGLFAPDKQPKYQVNF 251 (252)
Q Consensus 236 wGlf~~~~~~ky~~~~ 251 (252)
||+++.+|+.+.+..+
T Consensus 1 ~G~id~~G~~vi~~~y 16 (35)
T PF14903_consen 1 WGYIDKNGKIVIPPKY 16 (35)
T ss_pred CEEEeCCCCEEEEccc
Confidence 8999999988776543
No 43
>COG4213 XylF ABC-type xylose transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=29.70 E-value=77 Score=29.64 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEeccc
Q 025491 4 NQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAI 70 (252)
Q Consensus 4 ~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~ 70 (252)
+++.|..|+..-+..++. .|.+|+.-|.-...+ + -++|++.||.+++|||=-+
T Consensus 199 ~ps~Aq~~men~lta~~~--~vdaVvA~nDgtagG--------a----I~aL~a~Gl~g~vpVsGQD 251 (341)
T COG4213 199 LPSNAQQIMENLLTANYN--DIDAVVAPNDGTAGG--------A----IAALKAQGLAGKVPVSGQD 251 (341)
T ss_pred CHHHHHHHHHHHHhcccC--ceeEEEcCCCchhHH--------H----HHHHHhcccCCCCcccCcc
Confidence 578899999988888853 488888887743322 2 2577888999899977544
No 44
>PF07799 DUF1643: Protein of unknown function (DUF1643); InterPro: IPR012441 This entry is represented by Bacteriophage D3, Orf41.6. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The members of this family are all sequences found within hypothetical proteins expressed by various bacteria, archaea and phage. The region concerned is approximately 150 residues long.
Probab=29.56 E-value=54 Score=25.98 Aligned_cols=38 Identities=29% Similarity=0.517 Sum_probs=26.3
Q ss_pred CCCCCccccCCCcchhHHHHHHHHh--cCCCceeccCccccc
Q 025491 79 SPPSAGSFKQDYKPILDPLIAFLNE--NNSPLLVNLYPYFAI 118 (252)
Q Consensus 79 ~pPs~~~f~~~~~~~~~~~l~fL~~--~~d~~~vN~yPff~~ 118 (252)
.|..+..+.+| +.+.-+++|... -+.++++|+||+.+.
T Consensus 21 NPS~A~~~~~D--~T~~~~~~~a~~~gyg~~~i~NLf~~~~t 60 (136)
T PF07799_consen 21 NPSTADAEKDD--PTIRRCINFARRWGYGGVIIVNLFPQRST 60 (136)
T ss_pred CCCCCCCcCCC--HHHHHHHHHHhhcCCCeEEEEEecccccC
Confidence 34444444444 667778888755 567899999999874
No 45
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=27.28 E-value=2.5e+02 Score=25.31 Aligned_cols=90 Identities=13% Similarity=0.250 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCC
Q 025491 3 SNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPS 82 (252)
Q Consensus 3 ~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs 82 (252)
+++.....+++ +|..+.....+.+|.+-=|.+... .-..++.-|+.++.+|.+.|+ .+-|+.+ |.
T Consensus 84 ~~~~~R~~fi~-~iv~~~~~~~~dGidiD~E~~~~~-d~~~~~~fl~eL~~~l~~~~~--~lsv~v~-----------~~ 148 (298)
T cd06549 84 ADPSARAKFIA-NIAAYLERNQADGIVLDFEELPAD-DLPKYVAFLSELRRRLPAQGK--QLTVTVP-----------AD 148 (298)
T ss_pred cCHHHHHHHHH-HHHHHHHHhCCCCEEEecCCCChh-HHHHHHHHHHHHHHHhhhcCc--EEEEEec-----------CC
Confidence 44444444444 454444344566777766765322 355688899999999998875 2333322 11
Q ss_pred CccccCCCcchhHHHHHHHHhcCCCceeccCcccc
Q 025491 83 AGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFA 117 (252)
Q Consensus 83 ~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~ 117 (252)
...|. +.-|.+.+|++.+-.|=+..
T Consensus 149 ~~~~d----------~~~l~~~~D~v~lMtYD~~~ 173 (298)
T cd06549 149 EADWN----------LKALARNADKLILMAYDEHY 173 (298)
T ss_pred CCCCC----------HHHHHHhCCEEEEEEeccCC
Confidence 11111 22366788999998887653
No 46
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=27.05 E-value=40 Score=33.20 Aligned_cols=29 Identities=31% Similarity=0.530 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHhccCCCCC---ceEEEEEecc
Q 025491 4 NQAEANTWVQDNVQNFANN---VKFKYIAVGN 32 (252)
Q Consensus 4 ~~~~a~~wv~~nv~~~~~~---~~i~~I~VGN 32 (252)
|+-.|.+||++||+.|-++ +.+-+.+.|.
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa 191 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGA 191 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchH
Confidence 4568999999999999643 3444445553
No 47
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=26.56 E-value=2.8e+02 Score=23.11 Aligned_cols=76 Identities=20% Similarity=0.249 Sum_probs=46.0
Q ss_pred HHHHHHhccCCCCCceEEEEEecccccCCCC-CHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCcccc
Q 025491 9 NTWVQDNVQNFANNVKFKYIAVGNEAKPGDD-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFK 87 (252)
Q Consensus 9 ~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f~ 87 (252)
..|+...+..+. ...+..+.+ .-+++..+ .....-+.++.++++++.+. -+-+.|++ +..++|
T Consensus 20 a~~~~~~l~~~~-~~~~~~~~~-~lP~~~~d~~~~~~p~~v~~~~~~i~~aD---~li~~tPe----Yn~s~p------- 83 (184)
T COG0431 20 AEAAAKLLPAGG-EVEVEFDDL-DLPLYNEDLEADGLPPAVQALREAIAAAD---GLIIATPE----YNGSYP------- 83 (184)
T ss_pred HHHHHHhhcccC-ceEEEeccc-ccCCCCcchhhccCCHHHHHHHHHHHhCC---EEEEECCc----cCCCCC-------
Confidence 355555555442 222222222 44455444 22467788999999999885 36789987 333443
Q ss_pred CCCcchhHHHHHHHHhc
Q 025491 88 QDYKPILDPLIAFLNEN 104 (252)
Q Consensus 88 ~~~~~~~~~~l~fL~~~ 104 (252)
..++.+|++|...
T Consensus 84 ----g~lKnaiD~l~~~ 96 (184)
T COG0431 84 ----GALKNAIDWLSRE 96 (184)
T ss_pred ----HHHHHHHHhCCHh
Confidence 7899999887544
No 48
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=26.47 E-value=66 Score=24.28 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=24.2
Q ss_pred EEecccccCCCC---CHHHHHHHHHHHHHHHHhCCC
Q 025491 28 IAVGNEAKPGDD---YAQYLVPAMRNIQNAINGASL 60 (252)
Q Consensus 28 I~VGNEvl~~~~---~~~~L~~ai~~v~~aL~~~gl 60 (252)
+.||--|-.-+| ..-.|+..||..|.+|++.|+
T Consensus 58 ~tv~Y~VATfnDc~eA~veL~~~IkEAr~~L~rkg~ 93 (95)
T KOG4841|consen 58 GTVGYRVATFNDCEEAAVELQSQIKEARADLARKGL 93 (95)
T ss_pred hhheeeeeccCCcHHHHHHHHHHHHHHHHHHHHccC
Confidence 344444443355 456899999999999999987
No 49
>PRK15321 putative type III secretion system effector protein OrgC; Provisional
Probab=24.51 E-value=1.9e+02 Score=22.42 Aligned_cols=47 Identities=17% Similarity=0.347 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCC
Q 025491 152 QLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKP 211 (252)
Q Consensus 152 ~~Da~~~a~~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~ 211 (252)
..|+++.-|...| + |-.|. .+-+|.+.+..-+++.++..+.+||+|.
T Consensus 38 ~KD~I~q~m~~F~--d----------p~~G~-pAF~s~~QQ~~mlq~~l~k~~~~t~L~E 84 (120)
T PRK15321 38 LKDSIYQEMNAFK--D----------PNSGD-SAFVSFEQQTAMLQNMLAKVEPGTHLYE 84 (120)
T ss_pred HHHHHHHHHHHhC--C----------CCCCC-cccccHHHHHHHHHHHHHhcCCCchHHH
Confidence 3577877776654 1 44443 3578999999999999999888888875
No 50
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=24.14 E-value=1.4e+02 Score=24.69 Aligned_cols=57 Identities=16% Similarity=0.304 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHhccCCCCCceEEEEEecccccCCCC--CHHHHHHHHHHHHHHHHhCCC
Q 025491 3 SNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDD--YAQYLVPAMRNIQNAINGASL 60 (252)
Q Consensus 3 ~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~--~~~~L~~ai~~v~~aL~~~gl 60 (252)
++....+..++ ++..++....+.+|-+-=|.....+ ....++..|+.+|++|.+.++
T Consensus 84 ~~~~~~~~f~~-~~~~~v~~~~~DGidiD~E~~~~~~~~~~~~~~~ll~~lr~~l~~~~~ 142 (210)
T cd00598 84 SDPASRAAFAN-SLVSFLKTYGFDGVDIDWEYPGAADNSDRENFITLLRELRSALGAANY 142 (210)
T ss_pred cCHHHHHHHHH-HHHHHHHHcCCCceEEeeeCCCCcCccHHHHHHHHHHHHHHHhcccCc
Confidence 34444444333 4444433345566666555543221 257899999999999987665
No 51
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=23.85 E-value=1.1e+02 Score=28.78 Aligned_cols=68 Identities=22% Similarity=0.207 Sum_probs=45.4
Q ss_pred CCCHHHHHHH-------HHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccc
Q 025491 2 ASNQAEANTW-------VQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELG 73 (252)
Q Consensus 2 a~~~~~a~~w-------v~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~ 73 (252)
|++..+|.+| ++.-|..-|+. .+-.||.|-=+- +..+..=.++.-|+.++.++||+++|+|+......
T Consensus 176 a~sf~eamr~GsevYh~LK~vik~kyG~---~a~nVGDEGGfA-PnI~~~~E~L~Li~~Ai~kagyt~kikIgmDvAas 250 (433)
T KOG2670|consen 176 ADSFAEAMRMGSEVYHHLKSVIKEKYGA---DATNVGDEGGFA-PNIQTNEEALDLIKEAINKAGYTGKVKIGMDVAAS 250 (433)
T ss_pred chhHHHHHHHhHHHHHHHHHHHHHHhCc---cccccccccCcC-CCccchHHHHHHHHHHHHhcCCCCceEEEEeechh
Confidence 3455667766 23233332344 466788775321 14566778889999999999999999999876543
No 52
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=21.47 E-value=4e+02 Score=24.27 Aligned_cols=68 Identities=24% Similarity=0.366 Sum_probs=50.1
Q ss_pred CCCCcEEEcccccCCCCCCC-------------------CCCCH-HHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecC
Q 025491 165 GGSLDIVISESGWPTAGGDG-------------------ALTNV-DNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE 224 (252)
Q Consensus 165 ~~~~~v~v~ETGWPs~G~~~-------------------a~as~-~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde 224 (252)
..+.+|+|-=-||=.+|-++ ..||. +-++-|++..+.|+ |-.-+ |-+||.
T Consensus 70 ~~~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~aPt~~E~~qwY~qRy~~~l-------Pa~Ge---iviFdR 139 (270)
T COG2326 70 ETGQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPAPTDRERGQWYFQRYVAHL-------PAAGE---IVIFDR 139 (270)
T ss_pred hcCCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCCCChHhhccHHHHHHHHhC-------CCCCe---EEEech
Confidence 35678888777999998531 23555 45799999999998 32223 567899
Q ss_pred CCCCCCCCCCeeeeecCC
Q 025491 225 NGKTGPETERHWGLFAPD 242 (252)
Q Consensus 225 ~~K~g~~~E~~wGlf~~~ 242 (252)
.|=.-.++||--|.+++.
T Consensus 140 SwYnr~gVeRVmGfct~~ 157 (270)
T COG2326 140 SWYNRAGVERVMGFCTPK 157 (270)
T ss_pred hhccccCeeeccccCCHH
Confidence 998767899999988764
No 53
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=21.10 E-value=94 Score=22.88 Aligned_cols=42 Identities=7% Similarity=0.088 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEeecCCCC
Q 025491 186 LTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGK 227 (252)
Q Consensus 186 ~as~~na~~y~~~l~~~~~~gtp~r~~~~~~~~F~~fde~~K 227 (252)
+=|.+.-+++++.+...+.+-+..+|+++.+.+.+-=.|+|-
T Consensus 39 gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~edWS 80 (82)
T PF14552_consen 39 GRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPREDWS 80 (82)
T ss_dssp ---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-GGGEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCcccCC
Confidence 456777888899988888544455677888888888888884
No 54
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=20.85 E-value=5e+02 Score=22.67 Aligned_cols=76 Identities=7% Similarity=-0.071 Sum_probs=50.9
Q ss_pred HHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCCCCccc
Q 025491 7 EANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSF 86 (252)
Q Consensus 7 ~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pPs~~~f 86 (252)
....|+....... +..++.+-++.-+|+..+.. . .|.++.+++.++.+. -+-+.|++ +..|+
T Consensus 44 ~la~~~~~~~~~~--g~~v~~idl~~lPl~~~d~~-~-~p~v~~l~~~v~~AD---gvii~TPE----Yn~si------- 105 (219)
T TIGR02690 44 LLAEEAARLLGCE--GRETRIFDPPGLPLPDAAHA-D-HPKVRELRQLSEWSE---GQVWCSPE----RHGAI------- 105 (219)
T ss_pred HHHHHHHHHHhhc--CCEEEEeCcccCCCCCcCcc-c-CHHHHHHHHHHHhCC---EEEEeCCc----cccCc-------
Confidence 3456766554432 45677777777778764422 2 678999999999884 37788887 33333
Q ss_pred cCCCcchhHHHHHHHHhc
Q 025491 87 KQDYKPILDPLIAFLNEN 104 (252)
Q Consensus 87 ~~~~~~~~~~~l~fL~~~ 104 (252)
.+.++..|++|...
T Consensus 106 ----pg~LKNaiDwls~~ 119 (219)
T TIGR02690 106 ----TGSQKDQIDWIPLS 119 (219)
T ss_pred ----CHHHHHHHHhcccC
Confidence 36789999887543
No 55
>KOG2555 consensus AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase [Nucleotide transport and metabolism]
Probab=20.76 E-value=39 Score=32.82 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=32.4
Q ss_pred CCCcchhHHHHHHHHhcCCCceeccCccccccCCCCCCccccc
Q 025491 88 QDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFAL 130 (252)
Q Consensus 88 ~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~~~l~~a~ 130 (252)
+|+.+-++.+-+.-.+..|.+..|+|||.+......++++-|.
T Consensus 79 Rdiesd~kdL~e~~i~~vdvVVcNLYPF~etVa~pgvtveeaV 121 (588)
T KOG2555|consen 79 RDIESDEKDLKEQGIDKVDVVVCNLYPFKETVAKPGVTVEEAV 121 (588)
T ss_pred ccCchhHHHHHHcCCCeEEEEEEeccchHhhhcCCCCcHHHHh
Confidence 4555667777666667789999999999998777667776654
No 56
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=20.41 E-value=1.3e+02 Score=27.82 Aligned_cols=97 Identities=11% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHhccCCCCCceEEEEEecccccCC--C-C-CHHHHHHHHHHHHHHHHhCCCCCCeeEeccccccccccc
Q 025491 3 SNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPG--D-D-YAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDAS 78 (252)
Q Consensus 3 ~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~--~-~-~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s 78 (252)
+++...+..++ +|..++....+.+|.+-=|.... + . ....++..|+.||++|.+.+- +..++.+...
T Consensus 92 ~~~~~r~~fi~-~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~~~~~--~~~ls~av~~------ 162 (362)
T cd02872 92 ASPENRKTFIK-SAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFEPEAP--RLLLTAAVSA------ 162 (362)
T ss_pred CCHHHHHHHHH-HHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHHhhCc--CeEEEEEecC------
Confidence 34443344433 33333333344555554443321 1 1 356789999999999998731 1234443311
Q ss_pred CCCCCccccCCCcchhHHHHHHHHhcCCCceeccCcccc
Q 025491 79 SPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFA 117 (252)
Q Consensus 79 ~pPs~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~ 117 (252)
....+.... -+.-|.+..|++.+-.|-|..
T Consensus 163 ---~~~~~~~~~------d~~~l~~~vD~v~vmtYD~~~ 192 (362)
T cd02872 163 ---GKETIDAAY------DIPEISKYLDFINVMTYDFHG 192 (362)
T ss_pred ---ChHHHhhcC------CHHHHhhhcceEEEecccCCC
Confidence 110011000 022366777999999998754
Done!