Query 025492
Match_columns 252
No_of_seqs 233 out of 2944
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:25:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025492.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025492hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ckk_A TRNA (guanine-N(7)-)-me 100.0 7.6E-42 2.6E-46 291.0 21.8 221 32-252 1-233 (235)
2 2vdv_E TRNA (guanine-N(7)-)-me 100.0 4.4E-42 1.5E-46 293.5 20.1 236 16-252 1-238 (246)
3 3dxy_A TRNA (guanine-N(7)-)-me 100.0 9.6E-38 3.3E-42 262.7 16.3 189 42-250 22-211 (218)
4 2fca_A TRNA (guanine-N(7)-)-me 100.0 5.9E-36 2E-40 250.6 14.3 184 45-249 29-213 (213)
5 1yzh_A TRNA (guanine-N(7)-)-me 100.0 6.5E-32 2.2E-36 225.4 20.6 181 45-247 32-214 (214)
6 3p2e_A 16S rRNA methylase; met 99.7 1.2E-18 4.2E-23 146.6 7.4 111 66-187 25-139 (225)
7 3e05_A Precorrin-6Y C5,15-meth 99.7 2.4E-16 8.3E-21 129.7 17.1 120 66-205 41-160 (204)
8 3mb5_A SAM-dependent methyltra 99.7 1.8E-16 6.3E-21 134.6 14.1 116 66-204 94-211 (255)
9 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.8E-16 9.4E-21 125.8 14.2 118 66-204 26-144 (178)
10 1yb2_A Hypothetical protein TA 99.7 3.1E-16 1E-20 135.4 15.4 120 66-209 111-232 (275)
11 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.5E-16 5.1E-21 136.8 13.2 106 66-187 71-178 (261)
12 1o54_A SAM-dependent O-methylt 99.7 4E-16 1.4E-20 134.6 15.4 157 66-250 113-272 (277)
13 3dtn_A Putative methyltransfer 99.7 1.4E-15 4.8E-20 127.3 16.0 164 66-247 45-215 (234)
14 2pwy_A TRNA (adenine-N(1)-)-me 99.7 7.4E-16 2.5E-20 130.8 13.8 160 66-250 97-257 (258)
15 3mti_A RRNA methylase; SAM-dep 99.7 5E-16 1.7E-20 125.6 11.4 113 66-188 23-136 (185)
16 3orh_A Guanidinoacetate N-meth 99.7 1.5E-16 5.1E-21 134.6 8.2 110 66-187 61-170 (236)
17 3njr_A Precorrin-6Y methylase; 99.7 2.9E-15 9.9E-20 123.9 15.7 115 66-204 56-171 (204)
18 3eey_A Putative rRNA methylase 99.6 8.5E-16 2.9E-20 125.4 10.9 114 66-187 23-139 (197)
19 1i9g_A Hypothetical protein RV 99.6 1.9E-15 6.5E-20 130.1 13.6 121 66-207 100-223 (280)
20 3tfw_A Putative O-methyltransf 99.6 3.7E-15 1.2E-19 126.9 14.3 104 66-186 64-169 (248)
21 1xdz_A Methyltransferase GIDB; 99.6 2.5E-15 8.5E-20 127.0 13.2 120 66-204 71-193 (240)
22 4htf_A S-adenosylmethionine-de 99.6 2.6E-15 9E-20 129.6 13.5 109 66-192 69-178 (285)
23 4df3_A Fibrillarin-like rRNA/T 99.6 4.2E-15 1.4E-19 125.6 14.3 123 64-204 76-208 (233)
24 3evz_A Methyltransferase; NYSG 99.6 3.5E-15 1.2E-19 124.7 13.4 129 66-204 56-197 (230)
25 3fpf_A Mtnas, putative unchara 99.6 3.8E-15 1.3E-19 129.8 14.0 100 66-187 123-222 (298)
26 2yvl_A TRMI protein, hypotheti 99.6 5.1E-15 1.7E-19 124.8 14.5 155 66-249 92-247 (248)
27 3g89_A Ribosomal RNA small sub 99.6 1.9E-15 6.5E-20 129.0 11.7 104 66-187 81-184 (249)
28 3p9n_A Possible methyltransfer 99.6 2.8E-15 9.5E-20 121.9 12.1 109 66-189 45-155 (189)
29 4hg2_A Methyltransferase type 99.6 8.9E-16 3E-20 131.7 9.2 96 66-187 40-135 (257)
30 3mq2_A 16S rRNA methyltransfer 99.6 1.4E-15 4.8E-20 126.2 10.1 112 66-187 28-140 (218)
31 3dr5_A Putative O-methyltransf 99.6 2.2E-15 7.4E-20 126.4 11.2 102 66-185 57-161 (221)
32 1dus_A MJ0882; hypothetical pr 99.6 5.1E-15 1.8E-19 119.4 13.0 119 66-203 53-173 (194)
33 1vl5_A Unknown conserved prote 99.6 2.5E-15 8.6E-20 127.9 11.5 103 66-187 38-140 (260)
34 3ntv_A MW1564 protein; rossman 99.6 2.6E-15 8.8E-20 126.4 11.0 101 66-185 72-174 (232)
35 3g5l_A Putative S-adenosylmeth 99.6 8.4E-15 2.9E-19 124.1 14.2 104 66-190 45-148 (253)
36 3mgg_A Methyltransferase; NYSG 99.6 3.9E-15 1.3E-19 127.7 12.0 105 66-187 38-142 (276)
37 3grz_A L11 mtase, ribosomal pr 99.6 2E-15 6.8E-20 124.1 9.3 116 66-204 61-176 (205)
38 3dh0_A SAM dependent methyltra 99.6 3.5E-15 1.2E-19 123.5 10.9 105 66-187 38-143 (219)
39 2ozv_A Hypothetical protein AT 99.6 4.3E-15 1.5E-19 127.4 11.7 133 66-202 37-184 (260)
40 2frn_A Hypothetical protein PH 99.6 4.1E-15 1.4E-19 128.8 11.6 117 66-205 126-249 (278)
41 3tma_A Methyltransferase; thum 99.6 6E-15 2E-19 131.8 12.9 122 66-196 204-326 (354)
42 3lpm_A Putative methyltransfer 99.6 5.9E-15 2E-19 126.2 12.3 129 66-203 50-191 (259)
43 4dzr_A Protein-(glutamine-N5) 99.6 5E-16 1.7E-20 127.6 5.3 128 66-201 31-178 (215)
44 3duw_A OMT, O-methyltransferas 99.6 7.5E-15 2.5E-19 122.2 12.5 104 66-186 59-166 (223)
45 2b3t_A Protein methyltransfera 99.6 1.2E-14 4.1E-19 125.3 14.1 132 66-209 110-258 (276)
46 2b25_A Hypothetical protein; s 99.6 7.3E-15 2.5E-19 130.2 13.0 123 66-202 106-234 (336)
47 3f4k_A Putative methyltransfer 99.6 8.7E-15 3E-19 124.0 12.8 103 66-187 47-150 (257)
48 2yxd_A Probable cobalt-precorr 99.6 3.1E-14 1.1E-18 113.8 15.3 113 66-204 36-148 (183)
49 1l3i_A Precorrin-6Y methyltran 99.6 1.9E-14 6.6E-19 115.8 13.7 118 66-205 34-152 (192)
50 1nt2_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.9E-19 121.0 12.5 103 66-187 58-161 (210)
51 3a27_A TYW2, uncharacterized p 99.6 9.9E-15 3.4E-19 126.0 12.5 115 66-202 120-239 (272)
52 1nkv_A Hypothetical protein YJ 99.6 7.8E-15 2.7E-19 124.2 11.7 103 66-187 37-140 (256)
53 3jwh_A HEN1; methyltransferase 99.6 7.6E-15 2.6E-19 121.7 11.3 111 66-192 30-145 (217)
54 2p7i_A Hypothetical protein; p 99.6 1.5E-14 5.1E-19 121.3 13.2 154 66-245 43-198 (250)
55 3dlc_A Putative S-adenosyl-L-m 99.6 8.4E-15 2.9E-19 120.5 11.1 151 68-243 46-200 (219)
56 1pjz_A Thiopurine S-methyltran 99.6 2.9E-15 1E-19 123.7 8.3 111 66-187 23-140 (203)
57 3kkz_A Uncharacterized protein 99.6 7.6E-15 2.6E-19 125.5 11.2 103 66-187 47-150 (267)
58 1xxl_A YCGJ protein; structura 99.6 1.3E-14 4.3E-19 122.4 12.2 103 66-187 22-124 (239)
59 3l8d_A Methyltransferase; stru 99.6 1E-14 3.5E-19 122.4 11.4 101 66-188 54-154 (242)
60 3u81_A Catechol O-methyltransf 99.6 7.1E-15 2.4E-19 122.6 10.4 129 66-209 59-192 (221)
61 3hnr_A Probable methyltransfer 99.6 3.2E-14 1.1E-18 117.8 13.9 147 66-240 46-195 (220)
62 3g5t_A Trans-aconitate 3-methy 99.6 1.4E-14 4.9E-19 126.0 12.2 104 66-185 37-147 (299)
63 3adn_A Spermidine synthase; am 99.6 8.7E-15 3E-19 127.9 10.7 129 66-201 84-216 (294)
64 3tr6_A O-methyltransferase; ce 99.6 6.9E-15 2.4E-19 122.5 9.3 104 66-186 65-173 (225)
65 1jsx_A Glucose-inhibited divis 99.6 9.6E-15 3.3E-19 120.0 10.0 101 66-188 66-166 (207)
66 3hem_A Cyclopropane-fatty-acyl 99.6 2.3E-14 8E-19 124.8 13.0 106 66-188 73-184 (302)
67 3jwg_A HEN1, methyltransferase 99.6 1.2E-14 4.1E-19 120.5 10.6 108 66-189 30-142 (219)
68 1inl_A Spermidine synthase; be 99.6 2.1E-14 7.3E-19 125.5 12.7 129 67-202 92-224 (296)
69 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.8E-14 6E-19 121.0 11.6 106 66-189 78-184 (233)
70 2ift_A Putative methylase HI07 99.6 9.9E-15 3.4E-19 120.3 9.5 108 66-190 54-166 (201)
71 4dcm_A Ribosomal RNA large sub 99.6 2.9E-14 9.8E-19 128.7 13.4 123 66-201 223-349 (375)
72 2o57_A Putative sarcosine dime 99.6 2.2E-14 7.7E-19 124.3 11.9 104 66-187 83-187 (297)
73 1fbn_A MJ fibrillarin homologu 99.6 3.2E-14 1.1E-18 119.4 12.4 102 66-186 75-177 (230)
74 1zx0_A Guanidinoacetate N-meth 99.6 3.6E-15 1.2E-19 125.5 6.6 109 66-187 61-170 (236)
75 2xvm_A Tellurite resistance pr 99.6 4.6E-14 1.6E-18 114.7 12.9 104 66-187 33-136 (199)
76 3bus_A REBM, methyltransferase 99.6 3.6E-14 1.2E-18 121.4 12.6 104 66-187 62-166 (273)
77 3gjy_A Spermidine synthase; AP 99.5 1.4E-14 4.7E-19 127.6 10.1 110 68-188 92-201 (317)
78 2vdw_A Vaccinia virus capping 99.5 1.8E-14 6.3E-19 126.3 10.8 122 66-194 49-176 (302)
79 1xj5_A Spermidine synthase 1; 99.5 1.9E-14 6.5E-19 127.9 11.0 117 66-189 121-237 (334)
80 1ws6_A Methyltransferase; stru 99.5 1E-14 3.4E-19 115.8 8.2 106 66-190 42-150 (171)
81 3g07_A 7SK snRNA methylphospha 99.5 9.1E-15 3.1E-19 127.3 8.6 122 66-189 47-222 (292)
82 1uir_A Polyamine aminopropyltr 99.5 3.8E-14 1.3E-18 124.9 12.5 133 66-202 78-215 (314)
83 2gb4_A Thiopurine S-methyltran 99.5 2E-14 6.7E-19 123.0 10.4 111 66-187 69-191 (252)
84 3bwc_A Spermidine synthase; SA 99.5 3.9E-14 1.3E-18 124.2 12.6 131 66-203 96-230 (304)
85 2pt6_A Spermidine synthase; tr 99.5 2.9E-14 1E-18 126.0 11.8 130 66-203 117-250 (321)
86 3vc1_A Geranyl diphosphate 2-C 99.5 3E-14 1E-18 124.8 11.8 104 66-188 118-222 (312)
87 2gpy_A O-methyltransferase; st 99.5 1.9E-14 6.6E-19 120.7 10.0 104 66-186 55-159 (233)
88 1iy9_A Spermidine synthase; ro 99.5 4.9E-14 1.7E-18 122.0 12.8 130 66-203 76-209 (275)
89 2fpo_A Methylase YHHF; structu 99.5 2.7E-14 9.3E-19 117.7 10.6 107 66-190 55-163 (202)
90 3c3p_A Methyltransferase; NP_9 99.5 4.1E-14 1.4E-18 116.8 11.5 101 66-186 57-159 (210)
91 3lbf_A Protein-L-isoaspartate 99.5 2.7E-14 9.1E-19 117.6 10.3 99 66-189 78-176 (210)
92 2esr_A Methyltransferase; stru 99.5 8.5E-15 2.9E-19 117.5 7.1 107 66-190 32-141 (177)
93 1sui_A Caffeoyl-COA O-methyltr 99.5 3.2E-14 1.1E-18 121.1 11.0 104 66-186 80-189 (247)
94 3dli_A Methyltransferase; PSI- 99.5 7.2E-14 2.5E-18 117.6 12.9 143 66-246 42-184 (240)
95 1ve3_A Hypothetical protein PH 99.5 4.1E-14 1.4E-18 117.4 11.2 104 66-189 39-144 (227)
96 2nxc_A L11 mtase, ribosomal pr 99.5 3.1E-14 1E-18 121.6 10.6 115 66-204 121-235 (254)
97 4fsd_A Arsenic methyltransfera 99.5 3.4E-14 1.2E-18 128.3 11.2 114 66-187 84-203 (383)
98 3ujc_A Phosphoethanolamine N-m 99.5 2.7E-14 9.4E-19 121.2 9.7 104 66-187 56-159 (266)
99 2i7c_A Spermidine synthase; tr 99.5 3E-14 1E-18 123.7 10.0 129 66-202 79-211 (283)
100 1mjf_A Spermidine synthase; sp 99.5 5.6E-14 1.9E-18 121.9 11.7 125 66-201 76-211 (281)
101 2p35_A Trans-aconitate 2-methy 99.5 3E-14 1E-18 120.7 9.8 100 66-188 34-133 (259)
102 3r3h_A O-methyltransferase, SA 99.5 4.4E-15 1.5E-19 126.1 4.6 104 66-186 61-169 (242)
103 2fhp_A Methylase, putative; al 99.5 3.4E-14 1.2E-18 114.4 9.4 108 66-189 45-156 (187)
104 2yqz_A Hypothetical protein TT 99.5 3.4E-14 1.2E-18 120.5 9.7 102 66-187 40-141 (263)
105 2kw5_A SLR1183 protein; struct 99.5 9E-14 3.1E-18 113.7 11.9 102 68-189 32-133 (202)
106 3h2b_A SAM-dependent methyltra 99.5 4.6E-14 1.6E-18 115.5 10.1 101 66-188 42-142 (203)
107 1nv8_A HEMK protein; class I a 99.5 1.6E-13 5.5E-18 119.2 14.0 124 66-202 124-263 (284)
108 3m33_A Uncharacterized protein 99.5 1.2E-13 3.9E-18 115.6 12.6 91 66-185 49-140 (226)
109 3ajd_A Putative methyltransfer 99.5 5.1E-14 1.7E-18 121.6 10.7 116 66-188 84-212 (274)
110 2h00_A Methyltransferase 10 do 99.5 6.1E-15 2.1E-19 125.3 4.8 115 66-186 66-191 (254)
111 3ofk_A Nodulation protein S; N 99.5 4.1E-14 1.4E-18 116.9 9.7 106 66-190 52-157 (216)
112 1g8a_A Fibrillarin-like PRE-rR 99.5 1.2E-13 4.1E-18 115.3 12.5 104 66-187 74-178 (227)
113 3gu3_A Methyltransferase; alph 99.5 5.1E-14 1.7E-18 121.8 10.4 105 66-189 23-128 (284)
114 2ex4_A Adrenal gland protein A 99.5 4.2E-14 1.4E-18 119.1 9.5 107 66-188 80-186 (241)
115 2yxe_A Protein-L-isoaspartate 99.5 6.4E-14 2.2E-18 115.7 10.4 102 66-190 78-180 (215)
116 2o07_A Spermidine synthase; st 99.5 8.4E-14 2.9E-18 122.2 11.6 114 66-187 96-209 (304)
117 2hnk_A SAM-dependent O-methylt 99.5 6.7E-14 2.3E-18 118.0 10.5 105 66-187 61-181 (239)
118 3ccf_A Cyclopropane-fatty-acyl 99.5 2E-13 6.8E-18 117.5 13.2 146 66-243 58-207 (279)
119 3ocj_A Putative exported prote 99.5 2.1E-14 7.2E-19 125.4 7.1 107 66-187 119-227 (305)
120 3sm3_A SAM-dependent methyltra 99.5 3E-14 1E-18 118.6 7.7 112 66-188 31-142 (235)
121 1ixk_A Methyltransferase; open 99.5 8.5E-14 2.9E-18 122.7 10.7 113 66-187 119-246 (315)
122 2avd_A Catechol-O-methyltransf 99.5 5.4E-14 1.9E-18 117.3 9.0 104 66-186 70-178 (229)
123 3m70_A Tellurite resistance pr 99.5 1.3E-13 4.6E-18 118.9 11.8 104 66-188 121-224 (286)
124 2pxx_A Uncharacterized protein 99.5 9.9E-14 3.4E-18 113.9 10.3 112 66-191 43-163 (215)
125 3thr_A Glycine N-methyltransfe 99.5 5.5E-14 1.9E-18 121.6 9.2 123 66-193 58-181 (293)
126 3ou2_A SAM-dependent methyltra 99.5 1E-13 3.6E-18 114.1 10.4 103 66-190 47-149 (218)
127 3c3y_A Pfomt, O-methyltransfer 99.5 8.7E-14 3E-18 117.6 10.1 104 66-186 71-180 (237)
128 1p91_A Ribosomal RNA large sub 99.5 5.3E-14 1.8E-18 120.3 8.6 102 66-196 86-187 (269)
129 3bkw_A MLL3908 protein, S-aden 99.5 1.5E-13 5.1E-18 115.2 11.1 105 66-191 44-148 (243)
130 3lcc_A Putative methyl chlorid 99.5 6.1E-14 2.1E-18 117.5 8.7 104 67-187 68-171 (235)
131 2pbf_A Protein-L-isoaspartate 99.5 1.1E-13 3.8E-18 115.4 10.1 104 66-189 81-195 (227)
132 3cbg_A O-methyltransferase; cy 99.5 9.8E-14 3.3E-18 116.8 9.6 104 66-186 73-181 (232)
133 2b2c_A Spermidine synthase; be 99.5 5.7E-14 1.9E-18 123.8 8.3 115 66-188 109-223 (314)
134 1jg1_A PIMT;, protein-L-isoasp 99.5 9.9E-14 3.4E-18 116.6 9.4 101 66-191 92-193 (235)
135 1kpg_A CFA synthase;, cyclopro 99.5 3E-13 1E-17 116.6 12.6 106 66-189 65-170 (287)
136 1ri5_A MRNA capping enzyme; me 99.5 2E-13 7E-18 117.7 11.5 113 66-192 65-179 (298)
137 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1.5E-13 5.1E-18 116.1 10.3 105 66-188 94-198 (254)
138 1dl5_A Protein-L-isoaspartate 99.5 1.4E-13 4.7E-18 121.2 10.4 102 66-190 76-178 (317)
139 2p8j_A S-adenosylmethionine-de 99.5 1.4E-13 4.7E-18 112.9 9.4 107 66-189 24-130 (209)
140 1i1n_A Protein-L-isoaspartate 99.5 2.6E-13 8.8E-18 113.1 11.1 106 66-189 78-184 (226)
141 2fk8_A Methoxy mycolic acid sy 99.5 3.8E-13 1.3E-17 117.8 12.7 104 66-188 91-195 (318)
142 3cc8_A Putative methyltransfer 99.5 4.7E-13 1.6E-17 110.8 12.4 153 66-246 33-185 (230)
143 1wzn_A SAM-dependent methyltra 99.5 2.3E-13 8E-18 114.9 10.8 106 66-189 42-147 (252)
144 3q87_B N6 adenine specific DNA 99.5 4.3E-13 1.5E-17 107.5 11.4 116 66-204 24-140 (170)
145 3uwp_A Histone-lysine N-methyl 99.5 2.1E-13 7.3E-18 123.4 10.4 110 65-186 173-287 (438)
146 3e23_A Uncharacterized protein 99.5 6.8E-13 2.3E-17 109.2 12.5 98 66-187 44-141 (211)
147 2aot_A HMT, histamine N-methyl 99.5 1.6E-13 5.6E-18 119.0 9.0 109 66-188 53-173 (292)
148 3id6_C Fibrillarin-like rRNA/T 99.5 8.4E-13 2.9E-17 111.5 13.0 105 65-187 76-181 (232)
149 3htx_A HEN1; HEN1, small RNA m 99.5 6.9E-13 2.4E-17 128.4 14.1 119 66-194 722-841 (950)
150 3g2m_A PCZA361.24; SAM-depende 99.4 8.5E-14 2.9E-18 121.1 7.0 109 67-193 84-196 (299)
151 3gdh_A Trimethylguanosine synt 99.4 3.1E-14 1.1E-18 119.8 4.1 100 66-185 79-179 (241)
152 3ggd_A SAM-dependent methyltra 99.4 5.2E-13 1.8E-17 112.4 11.5 106 66-189 57-165 (245)
153 1y8c_A S-adenosylmethionine-de 99.4 2.7E-13 9.4E-18 113.5 9.5 109 66-192 38-147 (246)
154 3bgv_A MRNA CAP guanine-N7 met 99.4 6.6E-13 2.3E-17 116.2 12.3 119 66-191 35-159 (313)
155 3dmg_A Probable ribosomal RNA 99.4 4.7E-13 1.6E-17 120.9 11.6 121 66-201 234-355 (381)
156 3d2l_A SAM-dependent methyltra 99.4 4.1E-13 1.4E-17 112.4 10.4 108 66-192 34-142 (243)
157 1vbf_A 231AA long hypothetical 99.4 2.6E-13 8.8E-18 113.3 9.1 98 66-190 71-168 (231)
158 3ege_A Putative methyltransfer 99.4 2.8E-13 9.6E-18 115.6 9.5 97 66-188 35-131 (261)
159 2yxl_A PH0851 protein, 450AA l 99.4 1.1E-12 3.8E-17 120.9 14.2 138 66-210 260-415 (450)
160 1r18_A Protein-L-isoaspartate( 99.4 1.9E-13 6.3E-18 114.3 8.2 100 66-189 85-196 (227)
161 3i9f_A Putative type 11 methyl 99.4 2.6E-13 8.9E-18 107.9 8.7 95 66-187 18-112 (170)
162 2gs9_A Hypothetical protein TT 99.4 2.9E-13 9.9E-18 111.4 9.0 98 66-190 37-135 (211)
163 1o9g_A RRNA methyltransferase; 99.4 2.7E-13 9.3E-18 115.0 8.7 118 66-188 52-215 (250)
164 1ej0_A FTSJ; methyltransferase 99.4 3.1E-13 1E-17 107.0 8.4 120 66-202 23-151 (180)
165 3tm4_A TRNA (guanine N2-)-meth 99.4 1.1E-12 3.6E-17 118.2 13.0 119 66-195 218-337 (373)
166 3bkx_A SAM-dependent methyltra 99.4 6.6E-13 2.2E-17 113.6 11.0 107 66-187 44-159 (275)
167 3cgg_A SAM-dependent methyltra 99.4 5.1E-13 1.8E-17 107.6 9.4 118 66-204 47-166 (195)
168 3e8s_A Putative SAM dependent 99.4 6.1E-13 2.1E-17 109.9 9.9 153 66-245 53-208 (227)
169 1wy7_A Hypothetical protein PH 99.4 4.6E-12 1.6E-16 103.9 15.1 117 66-204 50-166 (207)
170 3q7e_A Protein arginine N-meth 99.4 8.5E-13 2.9E-17 117.8 11.4 104 66-185 67-171 (349)
171 1wxx_A TT1595, hypothetical pr 99.4 5.7E-13 1.9E-17 120.3 10.1 115 66-189 210-327 (382)
172 1sqg_A SUN protein, FMU protei 99.4 1.2E-12 4.1E-17 119.9 12.4 137 66-210 247-400 (429)
173 2bm8_A Cephalosporin hydroxyla 99.4 3.6E-13 1.2E-17 113.8 8.0 98 66-186 82-186 (236)
174 3kr9_A SAM-dependent methyltra 99.4 1.1E-12 3.9E-17 110.1 10.7 117 66-204 16-134 (225)
175 2pjd_A Ribosomal RNA small sub 99.4 5.1E-13 1.8E-17 118.8 9.1 120 66-200 197-317 (343)
176 2plw_A Ribosomal RNA methyltra 99.4 4.8E-13 1.6E-17 109.2 8.2 119 66-202 23-169 (201)
177 2qe6_A Uncharacterized protein 99.4 1.6E-12 5.4E-17 112.3 11.9 109 67-189 79-198 (274)
178 2b78_A Hypothetical protein SM 99.4 4E-13 1.4E-17 121.6 8.4 118 66-190 213-334 (385)
179 1u2z_A Histone-lysine N-methyl 99.4 8.8E-13 3E-17 120.7 10.6 105 66-186 243-358 (433)
180 3dp7_A SAM-dependent methyltra 99.4 1.2E-12 4.2E-17 117.2 11.3 106 66-187 180-287 (363)
181 3c0k_A UPF0064 protein YCCW; P 99.4 1.1E-12 3.7E-17 119.0 11.0 118 66-190 221-342 (396)
182 2avn_A Ubiquinone/menaquinone 99.4 1.3E-12 4.4E-17 111.3 10.7 101 66-191 55-156 (260)
183 3pfg_A N-methyltransferase; N, 99.4 4.7E-13 1.6E-17 114.0 7.8 100 66-187 51-151 (263)
184 3i53_A O-methyltransferase; CO 99.4 1.7E-12 5.8E-17 114.6 11.4 104 66-188 170-275 (332)
185 2yx1_A Hypothetical protein MJ 99.4 1.5E-12 5E-17 115.7 10.7 108 66-201 196-304 (336)
186 3fzg_A 16S rRNA methylase; met 99.4 4.5E-13 1.6E-17 109.3 6.8 100 66-185 50-150 (200)
187 2igt_A SAM dependent methyltra 99.4 9.7E-13 3.3E-17 116.8 9.3 114 66-187 154-272 (332)
188 3m6w_A RRNA methylase; rRNA me 99.4 1.8E-12 6.1E-17 119.7 11.1 113 66-187 102-229 (464)
189 2as0_A Hypothetical protein PH 99.4 2E-12 6.8E-17 117.2 11.3 118 66-190 218-338 (396)
190 2frx_A Hypothetical protein YE 99.4 4.6E-12 1.6E-16 117.6 13.8 115 65-187 117-246 (479)
191 2cmg_A Spermidine synthase; tr 99.4 1.1E-12 3.7E-17 112.7 8.5 113 67-202 74-190 (262)
192 3m4x_A NOL1/NOP2/SUN family pr 99.4 1.2E-12 4.1E-17 120.6 9.3 114 66-187 106-234 (456)
193 3lec_A NADB-rossmann superfami 99.4 4E-12 1.4E-16 107.0 11.6 118 66-204 22-140 (230)
194 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.4E-12 2.9E-16 114.5 14.7 115 66-200 287-402 (433)
195 2fyt_A Protein arginine N-meth 99.4 2.9E-12 1E-16 113.9 11.2 103 66-184 65-168 (340)
196 1qzz_A RDMB, aclacinomycin-10- 99.4 4.3E-12 1.5E-16 113.6 11.8 105 66-188 183-288 (374)
197 2i62_A Nicotinamide N-methyltr 99.4 6.3E-13 2.2E-17 112.7 5.9 115 66-187 57-198 (265)
198 2r3s_A Uncharacterized protein 99.3 5.5E-12 1.9E-16 111.0 12.0 105 66-187 166-271 (335)
199 2jjq_A Uncharacterized RNA met 99.3 1.9E-11 6.5E-16 111.9 15.6 107 66-197 291-397 (425)
200 3gnl_A Uncharacterized protein 99.3 9.6E-12 3.3E-16 105.5 12.6 117 66-204 22-140 (244)
201 1x19_A CRTF-related protein; m 99.3 7.7E-12 2.6E-16 111.6 12.7 103 66-187 191-295 (359)
202 3bxo_A N,N-dimethyltransferase 99.3 2.4E-12 8.2E-17 107.5 8.8 101 66-188 41-142 (239)
203 2qm3_A Predicted methyltransfe 99.3 1.5E-11 5E-16 110.7 14.5 107 66-189 173-280 (373)
204 2g72_A Phenylethanolamine N-me 99.3 8.2E-13 2.8E-17 114.3 5.8 115 66-187 72-215 (289)
205 3k6r_A Putative transferase PH 99.3 3.4E-12 1.2E-16 110.5 9.7 100 65-187 125-225 (278)
206 3iv6_A Putative Zn-dependent a 99.3 4.7E-12 1.6E-16 108.7 10.2 105 66-189 46-150 (261)
207 3mcz_A O-methyltransferase; ad 99.3 7.1E-12 2.4E-16 111.3 11.6 107 66-187 180-287 (352)
208 2a14_A Indolethylamine N-methy 99.3 5.8E-13 2E-17 114.0 4.1 117 66-187 56-197 (263)
209 3gwz_A MMCR; methyltransferase 99.3 1.3E-11 4.5E-16 110.7 13.1 104 66-187 203-307 (369)
210 4dmg_A Putative uncharacterize 99.3 4.9E-12 1.7E-16 114.7 10.3 112 66-189 215-328 (393)
211 1tw3_A COMT, carminomycin 4-O- 99.3 7.8E-12 2.7E-16 111.4 11.4 105 66-188 184-289 (360)
212 3r0q_C Probable protein argini 99.3 5.1E-12 1.7E-16 113.9 10.1 104 66-186 64-168 (376)
213 1vlm_A SAM-dependent methyltra 99.3 1.1E-11 3.7E-16 102.8 11.3 93 67-189 49-141 (219)
214 1g6q_1 HnRNP arginine N-methyl 99.3 3.5E-11 1.2E-15 106.4 14.2 103 66-184 39-142 (328)
215 2nyu_A Putative ribosomal RNA 99.3 5E-12 1.7E-16 102.6 7.3 107 66-189 23-147 (196)
216 3hp7_A Hemolysin, putative; st 99.3 8.2E-12 2.8E-16 108.7 8.7 98 66-186 86-184 (291)
217 2ip2_A Probable phenazine-spec 99.3 1.3E-11 4.6E-16 108.7 10.1 102 67-187 169-272 (334)
218 3opn_A Putative hemolysin; str 99.3 1.7E-11 5.7E-16 103.4 10.2 99 66-187 38-137 (232)
219 3dou_A Ribosomal RNA large sub 99.3 5.2E-12 1.8E-16 103.3 6.8 122 66-209 26-159 (191)
220 2y1w_A Histone-arginine methyl 99.3 1.4E-11 4.8E-16 109.8 10.1 103 66-186 51-154 (348)
221 2f8l_A Hypothetical protein LM 99.3 1.1E-11 3.7E-16 110.2 9.1 112 66-188 131-257 (344)
222 3bzb_A Uncharacterized protein 99.3 2.9E-11 1E-15 104.6 11.4 114 66-189 80-207 (281)
223 3bt7_A TRNA (uracil-5-)-methyl 99.3 3.6E-11 1.2E-15 108.0 12.2 109 67-197 215-337 (369)
224 3v97_A Ribosomal RNA large sub 99.2 2.1E-11 7.3E-16 118.0 10.7 115 66-189 540-659 (703)
225 2dul_A N(2),N(2)-dimethylguano 99.2 2.4E-11 8.2E-16 109.6 10.2 108 66-187 48-164 (378)
226 1zq9_A Probable dimethyladenos 99.2 1.7E-11 5.9E-16 106.4 8.8 77 66-155 29-106 (285)
227 2qfm_A Spermine synthase; sper 99.2 1.3E-11 4.6E-16 110.0 8.2 120 66-192 189-319 (364)
228 1ne2_A Hypothetical protein TA 99.2 1.1E-10 3.9E-15 95.2 13.0 110 66-203 52-161 (200)
229 3reo_A (ISO)eugenol O-methyltr 99.2 4.5E-11 1.6E-15 107.2 10.3 96 66-187 204-300 (368)
230 3b3j_A Histone-arginine methyl 99.2 1.7E-11 5.9E-16 113.8 7.6 102 66-185 159-261 (480)
231 2b9e_A NOL1/NOP2/SUN domain fa 99.2 1.8E-10 6E-15 101.2 13.5 136 66-209 103-260 (309)
232 2qy6_A UPF0209 protein YFCK; s 99.2 5.4E-11 1.9E-15 101.8 9.6 118 66-189 61-215 (257)
233 4a6d_A Hydroxyindole O-methylt 99.2 4.7E-11 1.6E-15 106.6 9.5 103 66-187 180-283 (353)
234 1af7_A Chemotaxis receptor met 99.2 4.2E-11 1.4E-15 103.5 8.5 111 67-186 107-251 (274)
235 3p9c_A Caffeic acid O-methyltr 99.2 8.1E-11 2.8E-15 105.5 10.1 96 66-187 202-298 (364)
236 2oxt_A Nucleoside-2'-O-methylt 99.2 9.4E-12 3.2E-16 107.1 3.8 108 66-189 75-187 (265)
237 4e2x_A TCAB9; kijanose, tetron 99.2 1.1E-11 3.6E-16 112.8 4.3 101 66-189 108-210 (416)
238 3k0b_A Predicted N6-adenine-sp 99.2 1.3E-10 4.5E-15 105.2 11.0 115 66-194 202-357 (393)
239 2wa2_A Non-structural protein 99.2 1.2E-11 4.1E-16 107.0 3.9 105 66-189 83-195 (276)
240 3ldu_A Putative methylase; str 99.2 3.1E-10 1E-14 102.6 13.3 115 66-194 196-351 (385)
241 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.6E-11 1.9E-15 106.6 8.3 96 66-186 210-305 (372)
242 1fp2_A Isoflavone O-methyltran 99.2 9.7E-11 3.3E-15 104.2 9.7 96 66-187 189-288 (352)
243 3lst_A CALO1 methyltransferase 99.2 3.8E-11 1.3E-15 106.7 6.9 100 66-187 185-286 (348)
244 3giw_A Protein of unknown func 99.2 1.2E-10 4.1E-15 100.3 9.7 124 67-202 80-219 (277)
245 3ldg_A Putative uncharacterize 99.1 4.4E-10 1.5E-14 101.5 13.7 115 66-194 195-350 (384)
246 2h1r_A Dimethyladenosine trans 99.1 1.1E-10 3.7E-15 102.0 9.3 76 66-154 43-118 (299)
247 2zfu_A Nucleomethylin, cerebra 99.1 6.9E-11 2.4E-15 97.4 7.5 101 66-204 68-170 (215)
248 3axs_A Probable N(2),N(2)-dime 99.1 1.6E-10 5.3E-15 104.6 10.1 104 66-189 53-160 (392)
249 3sso_A Methyltransferase; macr 99.1 2.8E-11 9.7E-16 109.2 5.2 94 66-186 217-323 (419)
250 2p41_A Type II methyltransfera 99.1 7.6E-11 2.6E-15 103.3 7.5 104 66-189 83-193 (305)
251 2ih2_A Modification methylase 99.1 8.1E-11 2.8E-15 106.8 7.2 119 66-203 40-184 (421)
252 4hc4_A Protein arginine N-meth 99.1 4.1E-10 1.4E-14 101.3 10.7 103 66-185 84-187 (376)
253 4azs_A Methyltransferase WBDD; 99.1 9.4E-11 3.2E-15 111.0 5.7 100 68-187 69-173 (569)
254 1zg3_A Isoflavanone 4'-O-methy 99.1 4.1E-10 1.4E-14 100.3 9.0 97 66-187 194-293 (358)
255 3gru_A Dimethyladenosine trans 99.0 1.2E-09 4.1E-14 95.3 11.6 75 66-153 51-125 (295)
256 2okc_A Type I restriction enzy 99.0 4.1E-10 1.4E-14 103.5 8.7 115 66-190 172-310 (445)
257 1m6y_A S-adenosyl-methyltransf 99.0 2.7E-10 9.3E-15 99.6 6.6 78 66-151 27-107 (301)
258 3tqs_A Ribosomal RNA small sub 99.0 1.1E-09 3.7E-14 93.6 9.3 75 66-151 30-105 (255)
259 2xyq_A Putative 2'-O-methyl tr 99.0 1.1E-09 3.7E-14 95.3 8.5 113 66-203 64-187 (290)
260 2ld4_A Anamorsin; methyltransf 99.0 7.4E-10 2.5E-14 88.4 6.5 108 63-205 10-128 (176)
261 3o4f_A Spermidine synthase; am 99.0 4.9E-09 1.7E-13 91.0 12.1 115 67-188 85-199 (294)
262 3lcv_B Sisomicin-gentamicin re 99.0 7.2E-10 2.5E-14 94.5 6.4 101 67-185 134-234 (281)
263 2r6z_A UPF0341 protein in RSP 99.0 4.1E-10 1.4E-14 96.4 4.9 80 66-154 84-173 (258)
264 3v97_A Ribosomal RNA large sub 98.9 7.2E-09 2.5E-13 100.4 13.3 118 66-194 191-354 (703)
265 1yub_A Ermam, rRNA methyltrans 98.9 1.5E-11 5.2E-16 104.2 -4.9 108 66-187 30-145 (245)
266 3frh_A 16S rRNA methylase; met 98.9 5.3E-09 1.8E-13 88.2 10.1 99 66-185 106-204 (253)
267 1qam_A ERMC' methyltransferase 98.9 1.3E-08 4.6E-13 86.0 12.3 73 66-152 31-104 (244)
268 3fut_A Dimethyladenosine trans 98.9 4.2E-09 1.4E-13 90.8 8.5 71 68-152 49-120 (271)
269 2oyr_A UPF0341 protein YHIQ; a 98.9 6.7E-09 2.3E-13 88.8 9.5 119 67-200 90-211 (258)
270 3ll7_A Putative methyltransfer 98.9 3.8E-09 1.3E-13 95.9 7.8 78 66-150 94-171 (410)
271 2ar0_A M.ecoki, type I restric 98.8 4.4E-09 1.5E-13 99.0 7.9 119 66-192 170-317 (541)
272 3cvo_A Methyltransferase-like 98.8 2.6E-08 8.8E-13 82.0 11.2 98 66-185 31-152 (202)
273 3uzu_A Ribosomal RNA small sub 98.8 1.7E-08 5.9E-13 87.2 9.7 75 66-151 43-123 (279)
274 3lkd_A Type I restriction-modi 98.8 4.9E-08 1.7E-12 91.7 13.2 134 66-205 222-381 (542)
275 3s1s_A Restriction endonucleas 98.8 4.5E-08 1.6E-12 94.8 11.8 136 66-203 322-487 (878)
276 4fzv_A Putative methyltransfer 98.7 6.9E-08 2.3E-12 86.3 12.0 136 65-202 148-305 (359)
277 1qyr_A KSGA, high level kasuga 98.7 1.7E-08 6E-13 85.9 5.2 75 66-151 22-99 (252)
278 3ftd_A Dimethyladenosine trans 98.7 5.1E-08 1.8E-12 82.8 8.1 72 66-152 32-105 (249)
279 3khk_A Type I restriction-modi 98.6 4.5E-08 1.5E-12 92.1 7.5 132 67-206 246-420 (544)
280 2wk1_A NOVP; transferase, O-me 98.5 2.5E-07 8.7E-12 79.9 8.7 102 67-185 108-242 (282)
281 3c6k_A Spermine synthase; sper 98.5 3.3E-07 1.1E-11 82.0 8.6 126 66-192 206-336 (381)
282 2efj_A 3,7-dimethylxanthine me 98.4 5.1E-06 1.8E-10 74.7 14.3 174 67-244 54-290 (384)
283 3evf_A RNA-directed RNA polyme 98.3 3.3E-06 1.1E-10 72.2 11.1 109 66-189 75-186 (277)
284 3b5i_A S-adenosyl-L-methionine 98.3 3.5E-06 1.2E-10 75.6 11.4 123 66-188 53-226 (374)
285 1wg8_A Predicted S-adenosylmet 98.3 1.3E-06 4.4E-11 75.2 6.6 72 66-150 23-97 (285)
286 1m6e_X S-adenosyl-L-methionnin 98.2 1.5E-05 5.1E-10 71.0 12.8 170 67-244 53-278 (359)
287 3ua3_A Protein arginine N-meth 98.2 3.7E-06 1.3E-10 80.5 8.9 101 67-183 411-530 (745)
288 4gqb_A Protein arginine N-meth 98.1 1.1E-05 3.6E-10 77.0 9.9 101 67-183 359-463 (637)
289 2k4m_A TR8_protein, UPF0146 pr 98.1 8.9E-06 3E-10 63.1 6.8 83 67-187 37-121 (153)
290 3gcz_A Polyprotein; flavivirus 98.1 1.7E-05 5.8E-10 67.9 9.2 109 66-189 91-203 (282)
291 3ufb_A Type I restriction-modi 98.0 2.6E-05 8.8E-10 73.1 11.0 121 66-192 218-367 (530)
292 2zig_A TTHA0409, putative modi 98.0 1.4E-05 5E-10 69.2 7.8 46 65-112 235-280 (297)
293 3eld_A Methyltransferase; flav 97.8 0.0002 6.7E-09 61.8 10.9 111 66-189 82-193 (300)
294 3tka_A Ribosomal RNA small sub 97.7 3.1E-05 1.1E-09 68.1 5.4 74 66-150 58-136 (347)
295 4auk_A Ribosomal RNA large sub 97.7 0.00016 5.6E-09 64.4 9.5 86 65-180 211-296 (375)
296 3lkz_A Non-structural protein 97.7 0.00016 5.4E-09 62.3 9.0 107 66-190 95-207 (321)
297 2px2_A Genome polyprotein [con 97.6 8.8E-05 3E-09 62.7 5.7 104 66-189 74-185 (269)
298 3vyw_A MNMC2; tRNA wobble urid 97.6 0.00025 8.5E-09 61.7 8.7 128 67-204 98-239 (308)
299 3p8z_A Mtase, non-structural p 97.5 0.00046 1.6E-08 57.7 9.0 105 66-189 79-188 (267)
300 1i4w_A Mitochondrial replicati 97.4 0.00027 9.3E-09 62.8 7.1 58 66-132 59-116 (353)
301 1g60_A Adenine-specific methyl 97.4 0.00028 9.5E-09 59.8 6.4 44 65-110 212-255 (260)
302 3pvc_A TRNA 5-methylaminomethy 97.1 0.00075 2.6E-08 64.9 6.6 123 67-204 60-224 (689)
303 1g55_A DNA cytosine methyltran 96.9 0.0015 5.3E-08 57.6 7.0 78 67-155 3-81 (343)
304 3tos_A CALS11; methyltransfera 96.9 0.0027 9.3E-08 53.8 7.9 109 67-185 71-215 (257)
305 3g7u_A Cytosine-specific methy 96.9 0.0049 1.7E-07 55.1 9.9 124 68-205 4-143 (376)
306 3ps9_A TRNA 5-methylaminomethy 96.8 0.0078 2.7E-07 57.6 11.4 119 66-189 67-221 (676)
307 2py6_A Methyltransferase FKBM; 96.7 0.0057 1.9E-07 55.2 9.0 64 65-131 226-292 (409)
308 3r24_A NSP16, 2'-O-methyl tran 96.6 0.013 4.4E-07 50.5 9.9 101 64-188 108-218 (344)
309 3qv2_A 5-cytosine DNA methyltr 96.3 0.023 7.8E-07 49.8 10.1 128 66-205 10-152 (327)
310 1pl8_A Human sorbitol dehydrog 96.2 0.012 4E-07 51.8 7.9 95 66-187 172-273 (356)
311 2c7p_A Modification methylase 96.2 0.037 1.3E-06 48.4 10.7 121 66-205 11-145 (327)
312 2oo3_A Protein involved in cat 96.1 0.0049 1.7E-07 52.8 4.3 120 68-205 94-218 (283)
313 3jv7_A ADH-A; dehydrogenase, n 95.9 0.011 3.6E-07 51.7 5.9 99 65-187 171-270 (345)
314 1f8f_A Benzyl alcohol dehydrog 95.8 0.017 5.7E-07 51.0 6.9 95 65-186 190-288 (371)
315 2dph_A Formaldehyde dismutase; 95.8 0.0092 3.1E-07 53.3 5.2 108 65-186 185-298 (398)
316 1e3j_A NADP(H)-dependent ketos 95.7 0.034 1.1E-06 48.7 8.4 96 66-186 169-270 (352)
317 1boo_A Protein (N-4 cytosine-s 95.7 0.011 3.7E-07 51.7 4.9 44 64-109 251-294 (323)
318 4h0n_A DNMT2; SAH binding, tra 95.5 0.023 8E-07 49.8 6.6 128 67-205 4-141 (333)
319 1eg2_A Modification methylase 95.5 0.018 6E-07 50.3 5.5 45 65-111 242-289 (319)
320 3fpc_A NADP-dependent alcohol 95.3 0.033 1.1E-06 48.7 6.7 96 65-186 166-265 (352)
321 4dvj_A Putative zinc-dependent 95.2 0.033 1.1E-06 49.1 6.5 96 66-186 172-269 (363)
322 1kol_A Formaldehyde dehydrogen 95.2 0.036 1.2E-06 49.3 6.8 108 66-186 186-299 (398)
323 3s2e_A Zinc-containing alcohol 95.2 0.032 1.1E-06 48.5 6.3 94 65-186 166-262 (340)
324 2qrv_A DNA (cytosine-5)-methyl 95.2 0.072 2.5E-06 45.9 8.4 80 66-156 16-97 (295)
325 3two_A Mannitol dehydrogenase; 95.1 0.068 2.3E-06 46.6 8.3 88 65-186 176-264 (348)
326 2zig_A TTHA0409, putative modi 95.0 0.027 9.3E-07 48.3 5.2 70 119-189 18-99 (297)
327 1boo_A Protein (N-4 cytosine-s 95.0 0.036 1.2E-06 48.3 6.0 69 121-190 13-87 (323)
328 3m6i_A L-arabinitol 4-dehydrog 94.9 0.094 3.2E-06 45.9 8.5 96 66-186 180-282 (363)
329 3uog_A Alcohol dehydrogenase; 94.6 0.088 3E-06 46.2 7.7 95 65-187 189-287 (363)
330 1uuf_A YAHK, zinc-type alcohol 94.6 0.12 4E-06 45.6 8.5 94 65-187 194-288 (369)
331 1vj0_A Alcohol dehydrogenase, 94.6 0.064 2.2E-06 47.5 6.8 95 66-186 196-297 (380)
332 1cdo_A Alcohol dehydrogenase; 94.6 0.073 2.5E-06 46.9 7.1 94 66-186 193-293 (374)
333 1p0f_A NADP-dependent alcohol 94.5 0.072 2.5E-06 46.9 6.9 96 65-187 191-293 (373)
334 2jhf_A Alcohol dehydrogenase E 94.5 0.099 3.4E-06 46.0 7.7 94 66-186 192-292 (374)
335 2fzw_A Alcohol dehydrogenase c 94.5 0.09 3.1E-06 46.2 7.4 95 65-186 190-291 (373)
336 4ej6_A Putative zinc-binding d 94.2 0.098 3.3E-06 46.2 7.0 98 66-187 183-284 (370)
337 1e3i_A Alcohol dehydrogenase, 94.2 0.098 3.4E-06 46.1 7.0 94 66-186 196-296 (376)
338 4eez_A Alcohol dehydrogenase 1 94.1 0.15 5E-06 44.3 7.9 98 65-186 163-262 (348)
339 3uko_A Alcohol dehydrogenase c 94.1 0.075 2.5E-06 46.9 6.1 94 66-186 194-294 (378)
340 1rjd_A PPM1P, carboxy methyl t 93.9 0.82 2.8E-05 39.9 12.2 128 66-202 98-253 (334)
341 2h6e_A ADH-4, D-arabinose 1-de 93.7 0.1 3.4E-06 45.5 6.0 96 66-187 171-269 (344)
342 1pqw_A Polyketide synthase; ro 93.7 0.088 3E-06 41.8 5.2 95 66-187 39-137 (198)
343 3fwz_A Inner membrane protein 93.4 0.99 3.4E-05 33.6 10.6 105 66-196 7-114 (140)
344 2d8a_A PH0655, probable L-thre 93.3 0.15 5E-06 44.4 6.4 95 66-187 168-267 (348)
345 3fbg_A Putative arginate lyase 93.3 0.12 4.2E-06 44.9 5.9 95 66-186 151-247 (346)
346 1eg2_A Modification methylase 93.1 0.07 2.4E-06 46.5 4.0 65 122-190 38-109 (319)
347 4a2c_A Galactitol-1-phosphate 93.1 0.26 8.9E-06 42.6 7.7 98 65-187 160-260 (346)
348 3ubt_Y Modification methylase 93.0 0.33 1.1E-05 41.8 8.2 120 68-204 2-134 (331)
349 3ip1_A Alcohol dehydrogenase, 92.9 0.32 1.1E-05 43.3 8.2 96 66-186 214-317 (404)
350 4eye_A Probable oxidoreductase 92.9 0.16 5.6E-06 44.1 6.2 97 65-187 159-257 (342)
351 2eih_A Alcohol dehydrogenase; 92.7 0.22 7.6E-06 43.2 6.7 95 65-187 166-265 (343)
352 2hcy_A Alcohol dehydrogenase 1 92.7 0.12 4.1E-06 45.0 4.9 95 65-187 169-269 (347)
353 1g60_A Adenine-specific methyl 92.5 0.089 3E-06 44.1 3.7 79 123-203 5-89 (260)
354 1piw_A Hypothetical zinc-type 92.5 0.12 4.2E-06 45.2 4.8 93 65-186 179-275 (360)
355 2b5w_A Glucose dehydrogenase; 92.5 0.16 5.3E-06 44.5 5.4 93 67-187 174-273 (357)
356 1v3u_A Leukotriene B4 12- hydr 92.4 0.23 7.8E-06 42.8 6.4 95 65-187 145-244 (333)
357 1rjw_A ADH-HT, alcohol dehydro 92.1 0.22 7.4E-06 43.2 5.8 93 65-186 164-260 (339)
358 2j3h_A NADP-dependent oxidored 92.0 0.2 6.7E-06 43.4 5.4 95 65-186 155-254 (345)
359 1jvb_A NAD(H)-dependent alcoho 92.0 0.14 4.8E-06 44.5 4.5 97 65-186 170-270 (347)
360 3gms_A Putative NADPH:quinone 91.9 0.099 3.4E-06 45.4 3.4 96 65-187 144-243 (340)
361 4b7c_A Probable oxidoreductase 90.9 0.28 9.5E-06 42.3 5.2 96 65-187 149-248 (336)
362 2vz8_A Fatty acid synthase; tr 90.8 0.12 4E-06 56.7 3.2 103 66-187 1241-1348(2512)
363 3goh_A Alcohol dehydrogenase, 90.4 0.35 1.2E-05 41.3 5.4 87 65-187 142-229 (315)
364 4had_A Probable oxidoreductase 90.4 0.8 2.7E-05 39.6 7.7 107 68-204 25-137 (350)
365 2cdc_A Glucose dehydrogenase g 90.4 0.59 2E-05 40.9 6.9 92 66-186 181-277 (366)
366 4hkt_A Inositol 2-dehydrogenas 90.3 2.5 8.4E-05 36.2 10.8 106 68-205 5-115 (331)
367 3c85_A Putative glutathione-re 90.3 2.9 9.9E-05 32.3 10.4 103 67-195 40-147 (183)
368 2uyo_A Hypothetical protein ML 90.1 0.27 9.3E-06 42.5 4.4 110 67-189 104-220 (310)
369 3l9w_A Glutathione-regulated p 89.7 1.6 5.4E-05 39.2 9.3 103 67-196 5-111 (413)
370 3l4b_C TRKA K+ channel protien 89.5 1.2 4.1E-05 35.7 7.7 102 69-196 3-108 (218)
371 3me5_A Cytosine-specific methy 89.4 1.2 4.1E-05 40.9 8.3 82 66-156 88-183 (482)
372 3rc1_A Sugar 3-ketoreductase; 89.4 4.4 0.00015 35.0 11.7 108 67-205 28-141 (350)
373 1yqd_A Sinapyl alcohol dehydro 89.2 1.1 3.6E-05 39.3 7.7 93 66-186 188-281 (366)
374 2km1_A Protein DRE2; yeast, an 89.0 0.42 1.5E-05 36.2 4.1 42 138-185 55-96 (136)
375 1qor_A Quinone oxidoreductase; 88.9 0.53 1.8E-05 40.4 5.4 96 65-187 140-239 (327)
376 3gaz_A Alcohol dehydrogenase s 88.9 0.94 3.2E-05 39.2 7.0 94 65-186 150-245 (343)
377 2ixa_A Alpha-N-acetylgalactosa 88.8 4.5 0.00015 36.3 11.7 78 67-154 21-103 (444)
378 1yb5_A Quinone oxidoreductase; 88.4 0.52 1.8E-05 41.1 5.0 95 65-187 170-269 (351)
379 3jyn_A Quinone oxidoreductase; 88.4 0.46 1.6E-05 40.8 4.6 96 65-187 140-239 (325)
380 3qwb_A Probable quinone oxidor 88.3 0.51 1.7E-05 40.7 4.8 94 65-186 148-246 (334)
381 1iz0_A Quinone oxidoreductase; 88.2 0.55 1.9E-05 39.8 5.0 89 66-186 126-217 (302)
382 2dq4_A L-threonine 3-dehydroge 88.2 0.54 1.8E-05 40.7 4.9 92 66-186 165-261 (343)
383 3iht_A S-adenosyl-L-methionine 88.2 0.59 2E-05 36.4 4.5 102 67-185 42-145 (174)
384 2j8z_A Quinone oxidoreductase; 88.1 0.7 2.4E-05 40.2 5.6 95 65-187 162-261 (354)
385 1wly_A CAAR, 2-haloacrylate re 88.0 0.88 3E-05 39.1 6.2 94 66-187 146-244 (333)
386 3ezy_A Dehydrogenase; structur 87.9 3.9 0.00013 35.1 10.4 107 68-204 4-115 (344)
387 4dcm_A Ribosomal RNA large sub 87.6 4 0.00014 35.9 10.4 110 67-202 40-151 (375)
388 1xa0_A Putative NADPH dependen 86.7 1.2 4.1E-05 38.1 6.3 91 68-186 152-245 (328)
389 2cf5_A Atccad5, CAD, cinnamyl 86.6 0.95 3.3E-05 39.4 5.7 93 66-186 181-274 (357)
390 3db2_A Putative NADPH-dependen 86.2 6 0.0002 34.1 10.6 106 68-204 7-117 (354)
391 2aef_A Calcium-gated potassium 86.0 3.9 0.00013 33.0 8.8 100 67-195 10-113 (234)
392 1lss_A TRK system potassium up 85.9 7 0.00024 28.1 9.5 100 68-194 6-109 (140)
393 4dup_A Quinone oxidoreductase; 85.7 0.92 3.1E-05 39.4 5.1 94 65-187 167-265 (353)
394 3nx4_A Putative oxidoreductase 85.7 2 7E-05 36.5 7.2 90 68-186 149-240 (324)
395 2c0c_A Zinc binding alcohol de 85.4 2 7E-05 37.3 7.2 93 66-187 164-261 (362)
396 3llv_A Exopolyphosphatase-rela 85.3 7.1 0.00024 28.5 9.3 101 67-195 7-111 (141)
397 3cea_A MYO-inositol 2-dehydrog 84.8 12 0.00041 31.9 11.8 107 67-203 9-121 (346)
398 3e18_A Oxidoreductase; dehydro 84.4 5.4 0.00019 34.6 9.5 106 67-204 6-116 (359)
399 2zb4_A Prostaglandin reductase 84.0 1.5 5.2E-05 37.9 5.7 92 67-186 162-259 (357)
400 3swr_A DNA (cytosine-5)-methyl 83.9 5 0.00017 40.1 9.9 80 66-156 540-632 (1002)
401 1zkd_A DUF185; NESG, RPR58, st 83.9 1.4 4.6E-05 39.4 5.3 37 68-104 83-126 (387)
402 3euw_A MYO-inositol dehydrogen 83.6 10 0.00035 32.4 10.8 106 68-204 6-116 (344)
403 1zh8_A Oxidoreductase; TM0312, 83.4 14 0.00047 31.6 11.6 109 67-205 19-134 (340)
404 3ce6_A Adenosylhomocysteinase; 83.4 4 0.00014 37.5 8.4 88 66-188 274-362 (494)
405 3mag_A VP39; methylated adenin 82.9 0.86 2.9E-05 39.0 3.4 35 66-100 61-99 (307)
406 2vhw_A Alanine dehydrogenase; 82.8 3.7 0.00013 36.2 7.7 100 66-187 168-268 (377)
407 4dkj_A Cytosine-specific methy 82.5 9.9 0.00034 33.9 10.4 43 67-109 11-58 (403)
408 3e9m_A Oxidoreductase, GFO/IDH 82.4 5.2 0.00018 34.2 8.4 109 67-205 6-119 (330)
409 2vn8_A Reticulon-4-interacting 82.4 3.8 0.00013 35.7 7.7 93 65-187 183-280 (375)
410 3q2i_A Dehydrogenase; rossmann 82.3 11 0.00038 32.4 10.6 107 67-204 14-126 (354)
411 2eez_A Alanine dehydrogenase; 82.1 3.5 0.00012 36.1 7.3 100 66-187 166-266 (369)
412 1tt7_A YHFP; alcohol dehydroge 81.8 2.1 7.2E-05 36.6 5.6 91 68-186 153-246 (330)
413 3krt_A Crotonyl COA reductase; 81.7 3.4 0.00012 37.1 7.3 41 65-106 228-270 (456)
414 3ec7_A Putative dehydrogenase; 81.7 8.7 0.0003 33.2 9.7 109 67-204 24-138 (357)
415 4f3n_A Uncharacterized ACR, CO 81.6 0.97 3.3E-05 40.9 3.5 44 67-110 139-187 (432)
416 1id1_A Putative potassium chan 81.5 9.5 0.00032 28.4 8.7 105 67-195 4-113 (153)
417 3gqv_A Enoyl reductase; medium 81.4 3 0.0001 36.4 6.6 95 65-186 164-262 (371)
418 3ic5_A Putative saccharopine d 81.2 11 0.00038 26.0 10.3 104 67-201 6-114 (118)
419 3moi_A Probable dehydrogenase; 80.5 11 0.00037 33.0 10.0 70 68-154 4-76 (387)
420 3mz0_A Inositol 2-dehydrogenas 79.6 11 0.00037 32.3 9.5 108 68-204 4-117 (344)
421 1lnq_A MTHK channels, potassiu 79.6 4.3 0.00015 34.8 6.9 98 68-194 117-218 (336)
422 2o3j_A UDP-glucose 6-dehydroge 79.5 12 0.00042 33.9 10.3 125 68-202 11-151 (481)
423 4gqa_A NAD binding oxidoreduct 79.3 6.6 0.00023 34.6 8.2 71 68-154 28-108 (412)
424 4h3v_A Oxidoreductase domain p 78.9 2.7 9.3E-05 36.4 5.5 70 68-154 8-87 (390)
425 1ydw_A AX110P-like protein; st 78.7 24 0.00082 30.3 11.5 111 67-205 7-123 (362)
426 3pid_A UDP-glucose 6-dehydroge 78.6 11 0.00036 34.0 9.3 123 68-203 38-170 (432)
427 3gg2_A Sugar dehydrogenase, UD 76.7 14 0.00048 33.3 9.7 107 68-187 4-122 (450)
428 4ft4_B DNA (cytosine-5)-methyl 76.4 7.3 0.00025 37.6 8.1 41 67-107 213-258 (784)
429 3ohs_X Trans-1,2-dihydrobenzen 76.4 34 0.0012 28.9 12.1 108 68-205 4-118 (334)
430 2g1u_A Hypothetical protein TM 76.4 9.3 0.00032 28.5 7.3 104 66-194 19-125 (155)
431 3oig_A Enoyl-[acyl-carrier-pro 76.0 19 0.00064 29.2 9.6 59 66-132 7-70 (266)
432 1dlj_A UDP-glucose dehydrogena 75.5 19 0.00065 31.8 10.0 120 69-202 3-133 (402)
433 2q3e_A UDP-glucose 6-dehydroge 74.8 24 0.00081 31.8 10.7 122 68-202 7-147 (467)
434 1mv8_A GMD, GDP-mannose 6-dehy 74.7 25 0.00087 31.2 10.8 105 69-186 3-122 (436)
435 4fb5_A Probable oxidoreductase 74.6 16 0.00053 31.5 9.2 71 68-154 27-106 (393)
436 1gu7_A Enoyl-[acyl-carrier-pro 74.6 3.6 0.00012 35.6 4.9 33 67-100 169-203 (364)
437 4a0s_A Octenoyl-COA reductase/ 74.5 7.8 0.00027 34.5 7.3 41 65-106 220-262 (447)
438 3vtf_A UDP-glucose 6-dehydroge 74.2 13 0.00046 33.5 8.7 105 67-186 22-143 (444)
439 4a27_A Synaptic vesicle membra 74.2 2.4 8.1E-05 36.7 3.6 95 65-187 142-238 (349)
440 4g65_A TRK system potassium up 74.1 5.7 0.00019 36.0 6.3 67 68-150 5-76 (461)
441 1pjc_A Protein (L-alanine dehy 73.1 9.9 0.00034 33.1 7.5 99 67-187 168-267 (361)
442 3v5n_A Oxidoreductase; structu 72.3 21 0.00072 31.5 9.6 114 67-204 38-161 (417)
443 1tlt_A Putative oxidoreductase 72.3 33 0.0011 28.7 10.5 106 67-205 6-117 (319)
444 3tqh_A Quinone oxidoreductase; 72.2 11 0.00037 31.9 7.4 92 65-187 152-245 (321)
445 3uuw_A Putative oxidoreductase 71.9 29 0.00099 28.9 10.0 105 67-204 7-117 (308)
446 2glx_A 1,5-anhydro-D-fructose 71.5 21 0.00073 30.1 9.1 105 68-204 2-113 (332)
447 3m2t_A Probable dehydrogenase; 71.0 6.8 0.00023 33.9 5.9 107 67-203 6-118 (359)
448 3btv_A Galactose/lactose metab 70.9 25 0.00086 31.3 9.8 74 67-154 21-101 (438)
449 3u3x_A Oxidoreductase; structu 70.8 28 0.00096 30.0 9.9 72 67-154 27-100 (361)
450 3b1f_A Putative prephenate deh 70.7 38 0.0013 27.8 10.4 105 68-201 8-116 (290)
451 3av4_A DNA (cytosine-5)-methyl 70.4 13 0.00044 38.4 8.4 80 66-156 851-943 (1330)
452 3e82_A Putative oxidoreductase 70.3 30 0.001 29.8 9.9 106 67-205 8-119 (364)
453 2y0c_A BCEC, UDP-glucose dehyd 70.2 15 0.0005 33.4 8.1 108 67-187 9-128 (478)
454 3evn_A Oxidoreductase, GFO/IDH 69.9 6.2 0.00021 33.7 5.3 108 67-205 6-119 (329)
455 2nvw_A Galactose/lactose metab 69.9 21 0.00073 32.3 9.2 73 67-154 40-120 (479)
456 1h2b_A Alcohol dehydrogenase; 69.3 7.8 0.00027 33.5 5.9 42 65-106 186-228 (359)
457 3gdo_A Uncharacterized oxidore 69.2 39 0.0013 28.9 10.5 103 68-203 7-115 (358)
458 4a7p_A UDP-glucose dehydrogena 68.6 11 0.00038 34.0 6.9 123 67-202 9-145 (446)
459 3e8x_A Putative NAD-dependent 68.5 41 0.0014 26.4 10.1 69 66-150 21-92 (236)
460 3p2y_A Alanine dehydrogenase/p 67.8 12 0.00041 33.1 6.8 40 66-106 184-224 (381)
461 3o26_A Salutaridine reductase; 67.7 15 0.00053 30.2 7.3 60 66-132 12-73 (311)
462 3ggo_A Prephenate dehydrogenas 67.2 57 0.0019 27.6 10.9 105 67-200 34-142 (314)
463 1zcj_A Peroxisomal bifunctiona 67.1 71 0.0024 28.6 12.7 104 68-188 39-151 (463)
464 1xea_A Oxidoreductase, GFO/IDH 66.8 37 0.0013 28.6 9.6 107 68-205 4-115 (323)
465 2p2s_A Putative oxidoreductase 66.7 17 0.00059 30.8 7.5 105 68-204 6-117 (336)
466 3qiv_A Short-chain dehydrogena 66.0 30 0.001 27.7 8.6 76 66-149 9-93 (253)
467 1hyh_A L-hicdh, L-2-hydroxyiso 65.9 59 0.002 27.2 12.1 120 68-199 3-134 (309)
468 3o38_A Short chain dehydrogena 65.4 21 0.00072 28.9 7.6 59 66-132 22-84 (266)
469 4gmf_A Yersiniabactin biosynth 64.9 29 0.00099 30.4 8.7 71 66-155 7-79 (372)
470 3h7a_A Short chain dehydrogena 64.3 24 0.00084 28.5 7.7 59 66-132 7-67 (252)
471 4fn4_A Short chain dehydrogena 64.1 35 0.0012 28.1 8.6 59 66-132 7-67 (254)
472 1h6d_A Precursor form of gluco 64.0 34 0.0012 30.4 9.2 110 67-204 84-201 (433)
473 3tjr_A Short chain dehydrogena 63.6 33 0.0011 28.5 8.6 76 66-149 31-115 (301)
474 3i23_A Oxidoreductase, GFO/IDH 63.6 31 0.0011 29.5 8.6 108 68-205 4-117 (349)
475 3d4o_A Dipicolinate synthase s 63.2 48 0.0016 27.6 9.5 89 66-187 155-244 (293)
476 3dty_A Oxidoreductase, GFO/IDH 63.2 25 0.00084 30.8 8.0 78 67-154 13-97 (398)
477 3lf2_A Short chain oxidoreduct 62.7 41 0.0014 27.2 8.9 61 66-132 8-70 (265)
478 3pi7_A NADH oxidoreductase; gr 62.7 6.1 0.00021 34.0 3.8 92 68-187 167-263 (349)
479 1xu9_A Corticosteroid 11-beta- 62.4 32 0.0011 28.2 8.2 77 66-149 28-113 (286)
480 2rir_A Dipicolinate synthase, 61.5 45 0.0016 27.8 9.1 89 66-187 157-246 (300)
481 4e12_A Diketoreductase; oxidor 61.4 47 0.0016 27.4 9.1 102 68-187 6-121 (283)
482 2ho3_A Oxidoreductase, GFO/IDH 61.3 44 0.0015 28.0 9.1 106 68-204 3-113 (325)
483 4ezb_A Uncharacterized conserv 60.8 37 0.0013 28.7 8.5 109 68-204 26-139 (317)
484 3c1a_A Putative oxidoreductase 60.6 44 0.0015 28.0 8.9 106 67-205 11-121 (315)
485 3ioy_A Short-chain dehydrogena 60.6 48 0.0016 27.9 9.2 61 66-132 8-70 (319)
486 3rkr_A Short chain oxidoreduct 60.5 35 0.0012 27.6 8.0 76 66-149 29-113 (262)
487 3g79_A NDP-N-acetyl-D-galactos 60.5 33 0.0011 31.2 8.5 108 68-187 20-147 (478)
488 3fhl_A Putative oxidoreductase 59.9 24 0.00083 30.3 7.3 105 67-204 6-116 (362)
489 1t2d_A LDH-P, L-lactate dehydr 59.9 80 0.0027 26.8 10.5 121 68-200 6-139 (322)
490 3nyw_A Putative oxidoreductase 59.5 50 0.0017 26.5 8.8 62 66-132 7-70 (250)
491 3kux_A Putative oxidoreductase 59.3 78 0.0027 26.8 10.4 106 67-205 8-119 (352)
492 3trk_A Nonstructural polyprote 59.1 5.4 0.00018 33.7 2.6 53 134-188 201-260 (324)
493 3ojo_A CAP5O; rossmann fold, c 58.7 40 0.0014 30.2 8.6 115 68-200 13-143 (431)
494 2dpo_A L-gulonate 3-dehydrogen 58.7 36 0.0012 29.0 8.0 102 68-187 8-123 (319)
495 3ucx_A Short chain dehydrogena 58.6 52 0.0018 26.6 8.8 76 66-149 11-95 (264)
496 2hjr_A Malate dehydrogenase; m 57.9 87 0.003 26.6 10.7 121 68-200 16-144 (328)
497 1vpt_A VP39; RNA CAP, poly(A) 57.2 7.9 0.00027 33.5 3.4 34 66-99 76-113 (348)
498 1zsy_A Mitochondrial 2-enoyl t 57.0 33 0.0011 29.3 7.6 34 65-99 167-203 (357)
499 3i1j_A Oxidoreductase, short c 56.0 38 0.0013 26.9 7.4 58 66-130 14-73 (247)
500 3lyl_A 3-oxoacyl-(acyl-carrier 55.4 51 0.0017 26.1 8.1 59 66-132 5-65 (247)
No 1
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=100.00 E-value=7.6e-42 Score=290.97 Aligned_cols=221 Identities=55% Similarity=1.023 Sum_probs=173.5
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCC------------CccCCCCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCH
Q 025492 32 SDSHFPVPISPSHVDYSLHYPHFFPPA------------DQVNCSKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRD 99 (252)
Q Consensus 32 ~~~~~~~~~~~~~~~w~~~f~~~~~~~------------~~~~~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~ 99 (252)
+++.+.||..|..++|...|+...... ......+.+.|||||||+|.++..||+.+|+.+++|||+|+
T Consensus 1 ~~~~~~~p~~p~~~~w~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~ 80 (235)
T 3ckk_A 1 GDHTLRYPVKPEEMDWSELYPEFFAPLTQNQSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRV 80 (235)
T ss_dssp ------CCSSGGGCCCTTTCTTC----------------------CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCH
T ss_pred CCCCCCCCCCcccCCchhhCccccccccccccccccccccccccCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCH
Confidence 467789999999999999998763110 01113346799999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcC
Q 025492 100 KVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV 179 (252)
Q Consensus 100 ~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp 179 (252)
.|++.|++++..++.....+..||.++++|+...++..++++++|.|+++||+||+|++|+++|+++..++++++++|||
T Consensus 81 ~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp 160 (235)
T 3ckk_A 81 KVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV 160 (235)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC
Confidence 99999998877655444456789999999997556666788999999999999999999999999999999999999999
Q ss_pred CcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCCCCCHHHHHHHHcCCCeEEEEEEecCCCC
Q 025492 180 GGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRRIVPTS 252 (252)
Q Consensus 180 gG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~t~~e~~~~~~G~~i~~~~~~k~~~~~ 252 (252)
||.|++.||+.+|.++|.+.+..++.|..+..+++..++..+.....|+||++++++|..+|+++|+|+.+|+
T Consensus 161 GG~l~~~td~~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~t~~e~k~~~~G~~~~~~~f~r~~~~~ 233 (235)
T 3ckk_A 161 GGLVYTITDVLELHDWMCTHFEEHPLFERVPLEDLSEDPVVGHLGTSTEEGKKVLRNGGKNFPAIFRRIQDPV 233 (235)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHTSTTEEEECGGGGTTCTTGGGTTTSSHHHHHHHHTTCCCEEEEEEECCCTT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCccccCchhcccCccccCCCCCCHHHHHHHHCCCCeEEEEEEECCCCC
Confidence 9999999999999999999999999898887666655655555678899999999999999999999999885
No 2
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=100.00 E-value=4.4e-42 Score=293.53 Aligned_cols=236 Identities=54% Similarity=0.984 Sum_probs=182.6
Q ss_pred CCCcccccccCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCccCCCCCceEEEEcCcccHHHHHHHHHCCCCeEEEE
Q 025492 16 LPRKRFYRARAHSNPLSDSHFPVPISPSHVDYSLHYPHFFPPADQVNCSKKIQFADIGCGFGGLLISLSTLFPEVLMIGM 95 (252)
Q Consensus 16 ~~~~~~~~~r~~~np~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGi 95 (252)
.|+|+|||+|+|.||+++....||..+..++|.+.|++.... .....++.+.|||||||+|.+++.+|+.+|+.+++||
T Consensus 1 ~p~~~~~r~r~~~np~~~~~~~~~~~~~~~~w~~~f~~~~~~-~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gv 79 (246)
T 2vdv_E 1 LPKKRYYRQRAHSNPFSDHQLEYPVSPQDMDWSKLYPYYKNA-ENGQMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGM 79 (246)
T ss_dssp -------------CTTGGGSCSSCCCCCCCCGGGTCGGGBC-----CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEE
T ss_pred CCcccceeccCCcchhhhhcCcccCCCCCCCHHHHhCccccc-ccccCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEE
Confidence 488999999999999999999999988889999999862100 0011123579999999999999999999999999999
Q ss_pred ecCHhHHHHHHHHHHHHhhcCCC--CcccEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHH
Q 025492 96 ELRDKVTEYVKERILALRVSNPG--QYQNISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEY 173 (252)
Q Consensus 96 Dis~~~i~~a~~~~~~~~~~~~~--~~~nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~ 173 (252)
|+|+.+++.|++++...+..... +++|+.++++|+.+.++..++++++|.|+++||+||+|.+|+++|+++..+++++
T Consensus 80 D~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~ 159 (246)
T 2vdv_E 80 EIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEY 159 (246)
T ss_dssp ESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHH
Confidence 99999999999887665433222 6689999999998667777888999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCCCCCHHHHHHHHcCCCeEEEEEEecCCCC
Q 025492 174 AYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRRIVPTS 252 (252)
Q Consensus 174 ~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~t~~e~~~~~~G~~i~~~~~~k~~~~~ 252 (252)
.++|+|||.|++.||+.+|.+++.+.+..++.|..+..+++..++....+.+.|+||.++.+.|..+|.++|+|..+|+
T Consensus 160 ~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~t~~e~k~~~~g~~~~~~~~~k~~~~~ 238 (246)
T 2vdv_E 160 AYVLKEGGVVYTITDVKDLHEWMVKHLEEHPLFERLSKEWEENDECVKIMRNATEEGKKVERKKGDKFVACFTRLPTPA 238 (246)
T ss_dssp HHHEEEEEEEEEEESCHHHHHHHHHHHHHSTTEEECCHHHHHTCHHHHHHHHSSHHHHHHHHTTCCCEEEEEEECCCCC
T ss_pred HHHcCCCCEEEEEeccHHHHHHHHHHHHhCcCeEecCccccccCcccccCCCCCHHHHHHHHCCCCeEEEEEEECCCcH
Confidence 9999999999999999999999999999988888876655555543333346799999999999999999999998874
No 3
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=100.00 E-value=9.6e-38 Score=262.75 Aligned_cols=189 Identities=19% Similarity=0.319 Sum_probs=167.6
Q ss_pred CCCCCccccCCCCCCCCCccCCCCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc
Q 025492 42 PSHVDYSLHYPHFFPPADQVNCSKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ 121 (252)
Q Consensus 42 ~~~~~w~~~f~~~~~~~~~~~~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~ 121 (252)
+..++|...|++. .++|||||||+|.++..+|+.+|+.+|+|||+|+.+++.|++++... +++
T Consensus 22 ~~~~d~~~~f~~~-----------~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~------~l~ 84 (218)
T 3dxy_A 22 EDMLDFPALFGRE-----------APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE------GLS 84 (218)
T ss_dssp SSCCCHHHHHSSC-----------CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT------TCS
T ss_pred CCCCCHHHHcCCC-----------CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh------CCC
Confidence 4557899999853 67999999999999999999999999999999999999999887653 788
Q ss_pred cEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHh
Q 025492 122 NISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLE 201 (252)
Q Consensus 122 nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 201 (252)
|+.++++|+.+.++..++++++|.|+++||+||++.+|+++|++++.++++++++|||||.|++.||+.+|+++|.+.+.
T Consensus 85 nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~ 164 (218)
T 3dxy_A 85 NLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMS 164 (218)
T ss_dssp SEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 99999999986566567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccc-ccccCccccCCCCCCHHHHHHHHcCCCeEEEEEEecCC
Q 025492 202 NHPMFEALTKE-ELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRRIVP 250 (252)
Q Consensus 202 ~~~~~~~~~~~-~~~~~p~~~~~~~~t~~e~~~~~~G~~i~~~~~~k~~~ 250 (252)
..+.|.++... ++...|. ..+.|+||+++.+.|+.||+++|+|.+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~~---~~~~t~fE~k~~~~G~~~~~~~~~~~~~ 211 (218)
T 3dxy_A 165 SIDGYKNLSESNDYVPRPA---SRPVTKFEQRGHRLGHGVWDLMFERVKL 211 (218)
T ss_dssp TSTTEEECCTTSSCBCCCT---TSCCCTTCCTTCTTCCSCEEEEEEECCC
T ss_pred hCCCcccccCcCccCCCCC---CCCCcHHHHHHHHCCCCeEEEEEEEccc
Confidence 88888877542 3433332 3688999999999999999999999863
No 4
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=100.00 E-value=5.9e-36 Score=250.61 Aligned_cols=184 Identities=20% Similarity=0.329 Sum_probs=158.0
Q ss_pred CCccccCCCCCCCCCccCCCCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEE
Q 025492 45 VDYSLHYPHFFPPADQVNCSKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNIS 124 (252)
Q Consensus 45 ~~w~~~f~~~~~~~~~~~~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~ 124 (252)
.+|.++|+.. .+.|||||||+|.++..+|+.+|+.+++|||+|+.+++.|++++... +++|+.
T Consensus 29 ~~~~~~f~~~-----------~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~------~~~nv~ 91 (213)
T 2fca_A 29 GKWNTVFGND-----------NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS------EAQNVK 91 (213)
T ss_dssp TCHHHHHTSC-----------CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS------CCSSEE
T ss_pred CCHHHHcCCC-----------CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc------CCCCEE
Confidence 4898888743 56899999999999999999999999999999999999999887653 678999
Q ss_pred EEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 125 VVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 125 ~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
++++|+.. ++..++++++|.|+++||+||++.+|+++|++...+++++.++|||||.|++.||+.++++++.+.+..++
T Consensus 92 ~~~~d~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 92 LLNIDADT-LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp EECCCGGG-HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred EEeCCHHH-HHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 99999975 55557788999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-cccccccccccCccccCCCCCCHHHHHHHHcCCCeEEEEEEecC
Q 025492 205 M-FEALTKEELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRRIV 249 (252)
Q Consensus 205 ~-~~~~~~~~~~~~p~~~~~~~~t~~e~~~~~~G~~i~~~~~~k~~ 249 (252)
+ +.....+.+...+ ...+.|+||+++.+.|+.||+++|+|..
T Consensus 171 ~~~~~~~~d~~~~~~---~~~~~t~~E~~~~~~G~~i~~~~~~~~~ 213 (213)
T 2fca_A 171 LLLTYVSLDLHNSNL---EGNIMTEYEEKFSALGQPIYRAEVEWRT 213 (213)
T ss_dssp CEEEEEESSGGGSSC---TTCCCCTTGGGSSSSSCCCEEEEEECCC
T ss_pred CcccccccccccccC---CCCCCcHHHHHHHHCCCCeEEEEEEECC
Confidence 3 2223223232222 2257799999999999999999999863
No 5
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=100.00 E-value=6.5e-32 Score=225.43 Aligned_cols=181 Identities=19% Similarity=0.341 Sum_probs=155.7
Q ss_pred CCccccCCCCCCCCCccCCCCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEE
Q 025492 45 VDYSLHYPHFFPPADQVNCSKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNIS 124 (252)
Q Consensus 45 ~~w~~~f~~~~~~~~~~~~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~ 124 (252)
.+|.+.|+.. .+.|||||||+|.++..+|+.+|+.+++|||+++.+++.|++++... +++|+.
T Consensus 32 ~~~~~~f~~~-----------~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~------~~~~v~ 94 (214)
T 1yzh_A 32 AKWRDLFGND-----------NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV------GVPNIK 94 (214)
T ss_dssp TTHHHHHTSC-----------CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------CCSSEE
T ss_pred cCHHHHcCCC-----------CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc------CCCCEE
Confidence 3788888743 56899999999999999999999999999999999999999888665 678999
Q ss_pred EEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 125 VVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 125 ~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
++++|+.+ ++..++++++|.|++++|+||++.+|+++|+....+++.+.++|+|||.|++.||+.++++++.+.+.+.+
T Consensus 95 ~~~~d~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 95 LLWVDGSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp EEECCSSC-GGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred EEeCCHHH-HHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 99999975 55557788999999999999999999999999999999999999999999999999999999999998876
Q ss_pred Ccccc--cccccccCccccCCCCCCHHHHHHHHcCCCeEEEEEEe
Q 025492 205 MFEAL--TKEELEADPVVKLLSSATEEGQKVARNGGQTFQAVFRR 247 (252)
Q Consensus 205 ~~~~~--~~~~~~~~p~~~~~~~~t~~e~~~~~~G~~i~~~~~~k 247 (252)
|..+ ..+.+... ....+.|+||+++.+.|+.||+++|++
T Consensus 174 -~~~~~~~~d~~~~~---~~~~~~t~~e~~~~~~g~~i~~~~~~~ 214 (214)
T 1yzh_A 174 -MKLNGVWLDLHASD---FEGNVMTEYEQKFSNKGQVIYRVEAEF 214 (214)
T ss_dssp -CEEEEEESSGGGSC---CCCCCCCHHHHHTGGGCCCCEEEEEEC
T ss_pred -CeeeeccccccccC---CCCCCCcHHHHHHHHCCCCeEEEEEEC
Confidence 4332 22222222 123688999999999999999999974
No 6
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.75 E-value=1.2e-18 Score=146.64 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=87.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecC-HhHHHHH---HHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELR-DKVTEYV---KERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis-~~~i~~a---~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~ 141 (252)
...|||||||+|.++..+|+..|+..++|||+| +.|++.| ++++ ...+++|+.++++|+.. ++..+ .+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~------~~~~~~~v~~~~~d~~~-l~~~~-~d 96 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKP------SKGGLSNVVFVIAAAES-LPFEL-KN 96 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCG------GGTCCSSEEEECCBTTB-CCGGG-TT
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHH------HHcCCCCeEEEEcCHHH-hhhhc-cC
Confidence 568999999999999999999899999999999 6777665 4332 22477899999999974 55433 27
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+|.|+++||.|. . +...+.....++++++++|||||.+++.+
T Consensus 97 ~v~~i~~~~~~~~--~-~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 97 IADSISILFPWGT--L-LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp CEEEEEEESCCHH--H-HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred eEEEEEEeCCCcH--H-hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 8999999987444 2 34444556789999999999999999943
No 7
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.72 E-value=2.4e-16 Score=129.65 Aligned_cols=120 Identities=16% Similarity=0.206 Sum_probs=101.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+|+..|...++|+|+++.+++.|++++... +.+|+.++.+|+.+.+. ...++|.
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~---~~~~~D~ 111 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF------VARNVTLVEAFAPEGLD---DLPDPDR 111 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH------TCTTEEEEECCTTTTCT---TSCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEeCChhhhhh---cCCCCCE
Confidence 56899999999999999999999899999999999999999988765 66899999999864332 2367999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 205 (252)
|+++.+.+- ...+++++.++|+|||.+++.+...+....+.+.+...++
T Consensus 112 i~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 112 VFIGGSGGM-----------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp EEESCCTTC-----------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred EEECCCCcC-----------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 998865431 2369999999999999999998887777888888887764
No 8
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.70 E-value=1.8e-16 Score=134.63 Aligned_cols=116 Identities=17% Similarity=0.284 Sum_probs=102.6
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||+|||+|.++..+++. .|...++|+|+++.+++.|++++... ++++ +.++.+|+.+ .++++++
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~----~~~~~~~ 163 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA------GFDDRVTIKLKDIYE----GIEEENV 163 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH------TCTTTEEEECSCGGG----CCCCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc------CCCCceEEEECchhh----ccCCCCc
Confidence 558999999999999999999 88999999999999999999988765 6666 9999999864 2567889
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|.|+++.|+|| .+++++.++|+|||.+++.+...+....+.+.+.+.+
T Consensus 164 D~v~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 164 DHVILDLPQPE-------------RVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp EEEEECSSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred CEEEECCCCHH-------------HHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 99999999887 4899999999999999999988888888888888776
No 9
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.70 E-value=2.8e-16 Score=125.85 Aligned_cols=118 Identities=16% Similarity=0.158 Sum_probs=96.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++..|...++|+|+++.+++.|++++... +.+ |+ ++.+|+.+.++. ..+++|
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~-~~~~d~~~~~~~--~~~~~D 96 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL------GVSDRI-AVQQGAPRAFDD--VPDNPD 96 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT------TCTTSE-EEECCTTGGGGG--CCSCCS
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh------CCCCCE-EEecchHhhhhc--cCCCCC
Confidence 45899999999999999999999999999999999999999877543 565 89 888998644431 127899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
.|+++++..+ ..+++++.++|+|||.+++.+...+....+.+.+...+
T Consensus 97 ~i~~~~~~~~------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 97 VIFIGGGLTA------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp EEEECC-TTC------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred EEEECCcccH------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 9999887655 14999999999999999999887777777777776554
No 10
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.70 E-value=3.1e-16 Score=135.39 Aligned_cols=120 Identities=11% Similarity=0.129 Sum_probs=101.3
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCC-CcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPG-QYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~-~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||+|||+|.++..+++. .|...++|+|+++.+++.|++++.. . +.+|+.++.+|+.+ .++++++
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~g~~~v~~~~~d~~~----~~~~~~f 180 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE------FYDIGNVRTSRSDIAD----FISDQMY 180 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT------TSCCTTEEEECSCTTT----CCCSCCE
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh------cCCCCcEEEEECchhc----cCcCCCc
Confidence 458999999999999999998 7888999999999999999887642 3 46789999999864 3556789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccc
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEAL 209 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~ 209 (252)
|.|+++.|+|+ .+++.+.++|+|||.+++.+...+....+.+.+.+.+ |..+
T Consensus 181 D~Vi~~~~~~~-------------~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~G-f~~~ 232 (275)
T 1yb2_A 181 DAVIADIPDPW-------------NHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASG-MHHL 232 (275)
T ss_dssp EEEEECCSCGG-------------GSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGT-EEEE
T ss_pred cEEEEcCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC-CeEE
Confidence 99999988876 4999999999999999999988877777777777654 4433
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.70 E-value=1.5e-16 Score=136.84 Aligned_cols=106 Identities=18% Similarity=0.244 Sum_probs=83.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
+..|||||||+|.++..||+.. ++++|+|||+|+.|++.|++++... ....||.++++|+.+ ++ ...+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~-----~~~~~v~~~~~D~~~-~~----~~~~ 140 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY-----KAPTPVDVIEGDIRD-IA----IENA 140 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS-----CCSSCEEEEESCTTT-CC----CCSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh-----ccCceEEEeeccccc-cc----cccc
Confidence 5689999999999999999984 5789999999999999999887543 234589999999863 43 3568
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|++++.-.+.... ....+|++++++|||||.|++..
T Consensus 141 d~v~~~~~l~~~~~~------~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 141 SMVVLNFTLQFLEPS------ERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceeeeeeeecCch------hHhHHHHHHHHHcCCCcEEEEEe
Confidence 999988754332110 01258999999999999998863
No 12
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.69 E-value=4e-16 Score=134.61 Aligned_cols=157 Identities=14% Similarity=0.174 Sum_probs=116.2
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||+|||+|.++..+++. .|...++|+|+++.+++.|++++... ++ +++.++.+|+.+. ++++++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~----~~~~~~ 182 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW------GLIERVTIKVRDISEG----FDEKDV 182 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT------TCGGGEEEECCCGGGC----CSCCSE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc------CCCCCEEEEECCHHHc----ccCCcc
Confidence 458999999999999999999 67889999999999999999887653 55 6899999998642 556789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccc-cccccCccccC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTK-EELEADPVVKL 222 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~ 222 (252)
|.|+++.|+|| .+++.+.++|+|||.+++.+...+....+.+.+.+.+ |..+.. +.+...-..
T Consensus 183 D~V~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~g-f~~~~~~~~~~~~~~~-- 246 (277)
T 1o54_A 183 DALFLDVPDPW-------------NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELP-FIRIEVWESLFRPYKP-- 246 (277)
T ss_dssp EEEEECCSCGG-------------GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSS-EEEEEEECCCCCCEEC--
T ss_pred CEEEECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC-CceeEEEEEeeeeeEe--
Confidence 99999999887 4999999999999999999988777777778887654 543321 111111010
Q ss_pred CCCCCHHHHHHHHcCCCeEEEEEEecCC
Q 025492 223 LSSATEEGQKVARNGGQTFQAVFRRIVP 250 (252)
Q Consensus 223 ~~~~t~~e~~~~~~G~~i~~~~~~k~~~ 250 (252)
....++.+ ....|++.|-+..+|..+
T Consensus 247 ~~~~~rp~--~~~~~~~~~li~ark~~~ 272 (277)
T 1o54_A 247 VPERLRPV--DRMVAHTAYMIFATKVCR 272 (277)
T ss_dssp CTTSCEEC--SCCCCCSCEEEEEEECSC
T ss_pred ccceeCCC--ccccCCCeEEEEEEecCC
Confidence 01111111 114677888777777643
No 13
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=1.4e-15 Score=127.31 Aligned_cols=164 Identities=13% Similarity=0.146 Sum_probs=107.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|+..++|+|+|+.+++.|++++. ...++.++++|+.. ++ ++ +++|.
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~~d~~~-~~--~~-~~fD~ 112 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR--------GNLKVKYIEADYSK-YD--FE-EKYDM 112 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC--------SCTTEEEEESCTTT-CC--CC-SCEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc--------cCCCEEEEeCchhc-cC--CC-CCceE
Confidence 458999999999999999999999999999999999998887642 22389999999864 33 33 89999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch----HH---HHHHHHHHhcCCCcccccccccccCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE----EL---GDWMRSCLENHPMFEALTKEELEADP 218 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~p 218 (252)
|++...-.+.... ....+++++.++|||||.+++.+... .. .............+............
T Consensus 113 v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (234)
T 3dtn_A 113 VVSALSIHHLEDE------DKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERS 186 (234)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC---
T ss_pred EEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhc
Confidence 9988654332110 11249999999999999999976321 11 11111111111223222111111111
Q ss_pred cccCCCCCCHHHHHHHHcCCCeEEEEEEe
Q 025492 219 VVKLLSSATEEGQKVARNGGQTFQAVFRR 247 (252)
Q Consensus 219 ~~~~~~~~t~~e~~~~~~G~~i~~~~~~k 247 (252)
......+..++.....++|.++-.+.|+.
T Consensus 187 ~~~~~~~~~~~~~ll~~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 187 KLDKDIEMNQQLNWLKEAGFRDVSCIYKY 215 (234)
T ss_dssp -CCCCCBHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccccccCHHHHHHHHHHcCCCceeeeeee
Confidence 11222344577888999999988887764
No 14
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.67 E-value=7.4e-16 Score=130.76 Aligned_cols=160 Identities=16% Similarity=0.140 Sum_probs=116.7
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.++..+++. .|...++|+|+++.+++.|++++... .+.+|+.++.+|+.+ .+ ++++++|
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~g~~~v~~~~~d~~~-~~--~~~~~~D 168 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF-----WQVENVRFHLGKLEE-AE--LEEAAYD 168 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----CCCCCEEEEESCGGG-CC--CCTTCEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCCCEEEEECchhh-cC--CCCCCcC
Confidence 558999999999999999999 77889999999999999998876542 035789999999874 32 5567899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLS 224 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 224 (252)
.|+++.|+|| .+++.+.++|+|||.+++.+...+....+.+.+.+.+ |..+...+.....+. ...
T Consensus 169 ~v~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g-f~~~~~~~~~~~~~~-~~~ 233 (258)
T 2pwy_A 169 GVALDLMEPW-------------KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHP-FRLERVLEVGWREWE-VRL 233 (258)
T ss_dssp EEEEESSCGG-------------GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTT-EEEEEEEEEEEEEEE-EET
T ss_pred EEEECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CceEEEEEeeeeEee-ecc
Confidence 9999998887 4999999999999999999988877788888887654 543321110000000 000
Q ss_pred CCCHHHHHHHHcCCCeEEEEEEecCC
Q 025492 225 SATEEGQKVARNGGQTFQAVFRRIVP 250 (252)
Q Consensus 225 ~~t~~e~~~~~~G~~i~~~~~~k~~~ 250 (252)
..++.+ ....|++.|-+..+|..+
T Consensus 234 ~~~rp~--~~~~~~~~~l~~ark~~~ 257 (258)
T 2pwy_A 234 PVAHPR--FQQVGHTAFLVALRRWKG 257 (258)
T ss_dssp TEEEEC--SSCCCCCCEEEEEEECCC
T ss_pred CccCCC--CccCCcceEEEEEEecCC
Confidence 011101 024577888888888764
No 15
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=5e-16 Score=125.61 Aligned_cols=113 Identities=13% Similarity=0.179 Sum_probs=83.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+|+. ...++|+|+|+.|++.|++++... +++|+.+++.|+. .+... .++++|.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~~~~-~l~~~-~~~~fD~ 92 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL------GIENTELILDGHE-NLDHY-VREPIRA 92 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH------TCCCEEEEESCGG-GGGGT-CCSCEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCcHH-HHHhh-ccCCcCE
Confidence 458999999999999999998 789999999999999999988765 6689999997765 34333 3678999
Q ss_pred EEEeCCC-CccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPD-PHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpd-P~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++++- |..........-....+++++.++|||||.+++..-
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9887421 110000000001123588999999999999998753
No 16
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=1.5e-16 Score=134.59 Aligned_cols=110 Identities=10% Similarity=0.054 Sum_probs=87.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
+..|||||||+|.++..+++..| ..++|||+++.+++.|+++... ...+++++.+|+.+.+ ..+++++||.
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~-------~~~~~~~~~~~a~~~~-~~~~~~~FD~ 131 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-------QTHKVIPLKGLWEDVA-PTLPDGHFDG 131 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGG-------CSSEEEEEESCHHHHG-GGSCTTCEEE
T ss_pred CCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhh-------CCCceEEEeehHHhhc-ccccccCCce
Confidence 56899999999999999998876 4799999999999999876532 3457999999997543 3577899999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+. |++....+..+......+++++.|+|||||+|.+..
T Consensus 132 i~~---D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILY---DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEE---CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEE---eeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 975 555444444444445679999999999999998853
No 17
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.66 E-value=2.9e-15 Score=123.91 Aligned_cols=115 Identities=17% Similarity=0.097 Sum_probs=95.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +..++|+|+++.+++.|++++... +++ |+.++.+|+.+.+.. ...+|
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~------g~~~~v~~~~~d~~~~~~~---~~~~D 124 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTY------GLSPRMRAVQGTAPAALAD---LPLPE 124 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCTTGGGTT---SCCCS
T ss_pred CCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc------CCCCCEEEEeCchhhhccc---CCCCC
Confidence 568999999999999999998 779999999999999999887664 666 899999998753432 34799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
.|++.... ...+++++.++|+|||.+++.+...+....+.+.+.+.+
T Consensus 125 ~v~~~~~~-------------~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 125 AVFIGGGG-------------SQALYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp EEEECSCC-------------CHHHHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred EEEECCcc-------------cHHHHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC
Confidence 99986522 123999999999999999999988888888888887765
No 18
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.64 E-value=8.5e-16 Score=125.45 Aligned_cols=114 Identities=17% Similarity=0.288 Sum_probs=87.0
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||+|||+|.++..+++.. |...++|+|+++.+++.|++++... ++ +|+.++++|+.. +.. +.++++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~~-~~~~~f 94 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL------NLIDRVTLIKDGHQN-MDK-YIDCPV 94 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT------TCGGGEEEECSCGGG-GGG-TCCSCE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCCeEEEECCHHH-Hhh-hccCCc
Confidence 4589999999999999999985 6779999999999999999887653 55 789999999874 432 345789
Q ss_pred cEEEEeCCC-CccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPD-PHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpd-P~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|++++|- |...............+++++.++|+|||.+++.+
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 999988654 22111111111112359999999999999999875
No 19
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.64 E-value=1.9e-15 Score=130.08 Aligned_cols=121 Identities=17% Similarity=0.223 Sum_probs=101.2
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC--cccEEEEeCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQ--YQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~--~~nv~~~~~da~~~l~~~~~~~s 142 (252)
...|||||||+|.++..+++. .|...++|+|+++.+++.|++++... .+ .+|+.++.+|+.+ + .+++++
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~g~~~~~v~~~~~d~~~-~--~~~~~~ 171 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGC-----YGQPPDNWRLVVSDLAD-S--ELPDGS 171 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH-----HTSCCTTEEEECSCGGG-C--CCCTTC
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCCCCcEEEEECchHh-c--CCCCCc
Confidence 458999999999999999996 57889999999999999998877542 02 4689999999874 3 255778
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcc
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFE 207 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~ 207 (252)
+|.|+++.|+|| .+++.+.++|+|||.+++.+...+....+.+.+..+..|.
T Consensus 172 ~D~v~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 172 VDRAVLDMLAPW-------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEEEEESSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred eeEEEECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 999999999988 4999999999999999999998888888888877633343
No 20
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=3.7e-15 Score=126.85 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=85.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++. |+.++.+|+.+.++.....+++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------g~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA------GVDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT------TCTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 45899999999999999999988 789999999999999999888664 554 8999999997655543224589
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|.|++..+.+. ...+++.+.++|+|||.|++.
T Consensus 138 D~V~~d~~~~~-----------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 138 DLIFIDADKPN-----------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp SEEEECSCGGG-----------HHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEEECCchHH-----------HHHHHHHHHHhcCCCeEEEEe
Confidence 99998654222 236999999999999999874
No 21
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=2.5e-15 Score=126.99 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=92.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc-CCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY-FEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~-~~~~s~d 144 (252)
...|||||||+|.+++.+|...|+..++|||+|+.|++.|++++... +++|+.++++|+.+ ++.. ..++++|
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~-~~~~~~~~~~fD 143 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL------QLENTTFCHDRAET-FGQRKDVRESYD 143 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEESCHHH-HTTCTTTTTCEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEeccHHH-hcccccccCCcc
Confidence 45899999999999999999888999999999999999999887765 67789999999874 4310 1157899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC--chHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD--VEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td--~~~~~~~~~~~~~~~~ 204 (252)
.|++..... ...+++.+.++|+|||.+++... ..+-...+.+.+...+
T Consensus 144 ~V~~~~~~~------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 144 IVTARAVAR------------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLG 193 (240)
T ss_dssp EEEEECCSC------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTT
T ss_pred EEEEeccCC------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcC
Confidence 999865322 13699999999999999988643 2233344455555554
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.63 E-value=2.6e-15 Score=129.60 Aligned_cols=109 Identities=16% Similarity=0.178 Sum_probs=87.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++++... ++ +++.++.+|+.+ ++. +.++++|
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~~-~~~~~fD 138 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAK------GVSDNMQFIHCAAQD-VAS-HLETPVD 138 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-------CCGGGEEEEESCGGG-TGG-GCSSCEE
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc------CCCcceEEEEcCHHH-hhh-hcCCCce
Confidence 358999999999999999998 679999999999999998876543 55 789999999874 432 4578999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
.|+++..-.+... ...+++++.++|||||.+++.+.+..-
T Consensus 139 ~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 139 LILFHAVLEWVAD--------PRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp EEEEESCGGGCSC--------HHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred EEEECchhhcccC--------HHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 9998754333221 136999999999999999998866543
No 23
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=4.2e-15 Score=125.56 Aligned_cols=123 Identities=12% Similarity=0.095 Sum_probs=94.5
Q ss_pred CCCceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 64 SKKIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 64 ~~~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
+++..|||||||+|.++..+|+. .|...++|+|+++.|++.+.+++ ...+|+..+.+|+.......+..++
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a--------~~~~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVV--------RDRRNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHS--------TTCTTEEEEESCTTCGGGGTTTCCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhh--------HhhcCeeEEEEeccCccccccccce
Confidence 34679999999999999999998 68889999999999998887653 2456999999998643222345678
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe---------CchHHHHHHHHHHhcCC
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT---------DVEELGDWMRSCLENHP 204 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t---------d~~~~~~~~~~~~~~~~ 204 (252)
+|.|+..++.|+.. ..++.++.++|||||.+++.. +....+....+.+.+.+
T Consensus 148 vDvVf~d~~~~~~~----------~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~G 208 (233)
T 4df3_A 148 VDGLYADVAQPEQA----------AIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGG 208 (233)
T ss_dssp EEEEEECCCCTTHH----------HHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTT
T ss_pred EEEEEEeccCChhH----------HHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCC
Confidence 99999888877632 258999999999999998853 22334455556666654
No 24
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=3.5e-15 Score=124.67 Aligned_cols=129 Identities=19% Similarity=0.159 Sum_probs=95.1
Q ss_pred CceEEEEcCc-ccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCG-FGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG-~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...||||||| +|.++..+|+.. ...++|+|+++.+++.|++++... +. ++.++++|+.. +. .++++++|
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~-~v~~~~~d~~~-~~-~~~~~~fD 125 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN------NS-NVRLVKSNGGI-IK-GVVEGTFD 125 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT------TC-CCEEEECSSCS-ST-TTCCSCEE
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh------CC-CcEEEeCCchh-hh-hcccCcee
Confidence 4689999999 999999999986 678999999999999999887653 55 89999999752 32 24568999
Q ss_pred EEEEeCCCCcccccc--cc---------ccccCHHHHHHHHHhhcCCcEEEEEeCc-hHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKN--HR---------RRVISPHLLDEYAYVLGVGGIIYTITDV-EELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h--~k---------rr~~~~~~l~~~~~~LkpgG~l~~~td~-~~~~~~~~~~~~~~~ 204 (252)
.|+++.|--+..... .. ..-....+++++.++|||||.+++.+.. ......+.+.+...+
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLG 197 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcC
Confidence 999886532211100 00 0001157999999999999999997754 355666777777665
No 25
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.63 E-value=3.8e-15 Score=129.80 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=82.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.+.+++.|+|||+++.|++.|++++... ++.|+.|+++|+.+ + +++++|.
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~------gl~~v~~v~gDa~~-l----~d~~FDv 191 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL------GVDGVNVITGDETV-I----DGLEFDV 191 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH------TCCSEEEEESCGGG-G----GGCCCSE
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc------CCCCeEEEECchhh-C----CCCCcCE
Confidence 56999999999987766555667899999999999999999988765 56899999999974 3 3689999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++....+- ...+++++.++|||||+|++..
T Consensus 192 V~~~a~~~d-----------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAALAEP-----------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTTCSC-----------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCCccC-----------HHHHHHHHHHHcCCCcEEEEEc
Confidence 998643211 1269999999999999999876
No 26
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.63 E-value=5.1e-15 Score=124.84 Aligned_cols=155 Identities=15% Similarity=0.161 Sum_probs=113.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.++..+++. ...++|+|+++.+++.|++++... ++ +++.++.+|+.+.+ ++++.+|
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~---~~~~~~D 160 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF------NLGKNVKFFNVDFKDAE---VPEGIFH 160 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT------TCCTTEEEECSCTTTSC---CCTTCBS
T ss_pred CCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc------CCCCcEEEEEcChhhcc---cCCCccc
Confidence 458999999999999999999 679999999999999999887653 44 68999999986421 2467899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLS 224 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 224 (252)
.|+++.|+|+ .+++.+.++|+|||.+++.+...+....+.+.+.+. |..+.......... ....
T Consensus 161 ~v~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~~-~~~~ 224 (248)
T 2yvl_A 161 AAFVDVREPW-------------HYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY--FGNLEVVEILHRHY-KTIS 224 (248)
T ss_dssp EEEECSSCGG-------------GGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT--EEEEEEEEEEEEEE-CCCG
T ss_pred EEEECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh--CCcceEEEeeeeEe-eccc
Confidence 9999888776 489999999999999999999888888888887765 55442211100000 0001
Q ss_pred CCCHHHHHHHHcCCCeEEEEEEecC
Q 025492 225 SATEEGQKVARNGGQTFQAVFRRIV 249 (252)
Q Consensus 225 ~~t~~e~~~~~~G~~i~~~~~~k~~ 249 (252)
..++.+ ....|++.|-+..+|.+
T Consensus 225 ~~~~~~--~~~~~~~~~l~~~rk~~ 247 (248)
T 2yvl_A 225 ERFRPE--DQMVAHTAYLVFGRKLK 247 (248)
T ss_dssp GGCCBC--SEEECCSCEEEEEEECC
T ss_pred CccCCC--ccCCCccEEEEEEEecc
Confidence 111111 12467788888777764
No 27
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.63 E-value=1.9e-15 Score=129.00 Aligned_cols=104 Identities=16% Similarity=0.175 Sum_probs=86.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|..++.+|..+|+..++|||+++.+++.|++++... ++.||.++++|+.+........++||.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL------GLKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh------CCCceEEEECcHHHhhcccccCCCceE
Confidence 45899999999999999999999999999999999999999988776 778899999999753221122478999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+...-.++ ..+++.+.++|||||.+++..
T Consensus 155 I~s~a~~~~------------~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 155 AVARAVAPL------------CVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEEESSCCH------------HHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCcCCH------------HHHHHHHHHHcCCCeEEEEEe
Confidence 998653333 369999999999999998865
No 28
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.62 E-value=2.8e-15 Score=121.92 Aligned_cols=109 Identities=11% Similarity=0.027 Sum_probs=86.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.+++.++.. +...++|+|+++.+++.|++++... +++|+.++++|+.+.+. .++++++|.
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~-~~~~~~fD~ 116 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEAL------GLSGATLRRGAVAAVVA-AGTTSPVDL 116 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHH------TCSCEEEEESCHHHHHH-HCCSSCCSE
T ss_pred CCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHc------CCCceEEEEccHHHHHh-hccCCCccE
Confidence 458999999999999988875 4568999999999999999988765 56799999999975432 244689999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHH--hhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAY--VLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~--~LkpgG~l~~~td~ 189 (252)
|+++.|-.+... ....+++.+.+ +|+|||.|++.+..
T Consensus 117 i~~~~p~~~~~~-------~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 117 VLADPPYNVDSA-------DVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEECCCTTSCHH-------HHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEECCCCCcchh-------hHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 999866433110 12358899998 99999999998754
No 29
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=8.9e-16 Score=131.73 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=80.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..|+... .+|+|||+|+.|++.|+ ..+|+.++++|+. .++ ++++++|.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~------------~~~~v~~~~~~~e-~~~--~~~~sfD~ 102 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQAL------------RHPRVTYAVAPAE-DTG--LPPASVDV 102 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCC------------CCTTEEEEECCTT-CCC--CCSSCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhh------------hcCCceeehhhhh-hhc--ccCCcccE
Confidence 4589999999999999999984 58999999999986542 3468999999986 354 78999999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++...-.|.. ...++++++|+|||||.|.+.+
T Consensus 103 v~~~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 103 AIAAQAMHWFD---------LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp EEECSCCTTCC---------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeeehhHhh---------HHHHHHHHHHHcCCCCEEEEEE
Confidence 99877666643 2369999999999999998865
No 30
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.62 E-value=1.4e-15 Score=126.22 Aligned_cols=112 Identities=18% Similarity=0.204 Sum_probs=83.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+|+.+|+..++|||+|+.|++.+.+.... .....+.+|+.++++|+.. ++ +++++ |.
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~--~~~~~~~~~v~~~~~d~~~-l~--~~~~~-d~ 101 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAA--KPAKGGLPNLLYLWATAER-LP--PLSGV-GE 101 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTS--CGGGTCCTTEEEEECCSTT-CC--SCCCE-EE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--hhhhcCCCceEEEecchhh-CC--CCCCC-CE
Confidence 5689999999999999999999999999999999998865433221 1122467799999999874 55 45667 88
Q ss_pred EEEeCCCCccccc-cccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEK-NHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~-h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++.++ |.... |+- .-...+++++.++|||||.+++..
T Consensus 102 v~~~~~--~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 102 LHVLMP--WGSLLRGVL--GSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEESC--CHHHHHHHH--TSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcc--chhhhhhhh--ccHHHHHHHHHHHcCCCcEEEEEe
Confidence 887775 32211 010 012469999999999999999965
No 31
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.62 E-value=2.2e-15 Score=126.38 Aligned_cols=102 Identities=10% Similarity=0.083 Sum_probs=84.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc--ccEEEEeCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY--QNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~--~nv~~~~~da~~~l~~~~~~~s 142 (252)
.+.|||||||+|..++.+|+..| +..++|||+++.+++.|++++... ++ +|+.++.+|+.+.++. +++++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------g~~~~~i~~~~gda~~~l~~-~~~~~ 129 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA------GYSPSRVRFLLSRPLDVMSR-LANDS 129 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT------TCCGGGEEEECSCHHHHGGG-SCTTC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCcCcEEEEEcCHHHHHHH-hcCCC
Confidence 45899999999999999999865 789999999999999999988664 44 4899999999875542 44689
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
||.|++..+.+. ...+++.+.++|+|||.|++
T Consensus 130 fD~V~~d~~~~~-----------~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 130 YQLVFGQVSPMD-----------LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEEEEECCCTTT-----------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCeEEEcCcHHH-----------HHHHHHHHHHHcCCCcEEEE
Confidence 999998643221 23599999999999999988
No 32
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=5.1e-15 Score=119.43 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=95.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc--EEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN--ISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n--v~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+++. ...++|+|+++.+++.|++++... +++| +.++.+|+.+. ++++++
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~------~~~~~~~~~~~~d~~~~----~~~~~~ 120 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLN------NLDNYDIRVVHSDLYEN----VKDRKY 120 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHT------TCTTSCEEEEECSTTTT----CTTSCE
T ss_pred CCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECchhcc----cccCCc
Confidence 458999999999999999998 779999999999999999887653 6677 99999998642 346789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENH 203 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 203 (252)
|.|+++.|-.+... ....+++.+.++|+|||.+++.+........+.+.+.+.
T Consensus 121 D~v~~~~~~~~~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 121 NKIITNPPIRAGKE-------VLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp EEEEECCCSTTCHH-------HHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred eEEEECCCcccchh-------HHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 99999766443111 123699999999999999999998876666666666544
No 33
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=2.5e-15 Score=127.95 Aligned_cols=103 Identities=16% Similarity=0.294 Sum_probs=84.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+ .++|+|+|+.|++.|++++... +.+|+.++.+|+.. ++ ++++++|.
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~-l~--~~~~~fD~ 106 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGN------GHQQVEYVQGDAEQ-MP--FTDERFHI 106 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCC-C-CC--SCTTCEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhc------CCCceEEEEecHHh-CC--CCCCCEEE
Confidence 45899999999999999999964 8999999999999998877553 66799999999863 54 67889999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++++.-.|... ...+++++.++|||||.|++..
T Consensus 107 V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 107 VTCRIAAHHFPN--------PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEhhhhHhcCC--------HHHHHHHHHHHcCCCCEEEEEE
Confidence 998865444321 1369999999999999999963
No 34
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=2.6e-15 Score=126.43 Aligned_cols=101 Identities=13% Similarity=0.311 Sum_probs=84.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccC-ccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIP-NYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~-~~~~~~s~ 143 (252)
...|||||||+|.++..+|+..|+..++|+|+++.+++.|++++... ++ +|+.++.+|+.+.++ . + ++++
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~-~-~~~f 143 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY------HFENQVRIIEGNALEQFENV-N-DKVY 143 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT------TCTTTEEEEESCGGGCHHHH-T-TSCE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEECCHHHHHHhh-c-cCCc
Confidence 45899999999999999999888999999999999999999888664 55 489999999975443 2 2 6789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
|.|++..+.+. ...+++.+.++|+|||.|++
T Consensus 144 D~V~~~~~~~~-----------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 144 DMIFIDAAKAQ-----------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EEEEEETTSSS-----------HHHHHHHHGGGEEEEEEEEE
T ss_pred cEEEEcCcHHH-----------HHHHHHHHHHhcCCCeEEEE
Confidence 99998764332 23699999999999999987
No 35
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.61 E-value=8.4e-15 Score=124.09 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=83.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+. .++|+|+|+.+++.|++++ ...++.++.+|+.. ++ ++++++|.
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~---------~~~~~~~~~~d~~~-~~--~~~~~fD~ 111 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKT---------TSPVVCYEQKAIED-IA--IEPDAYNV 111 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHC---------CCTTEEEEECCGGG-CC--CCTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhh---------ccCCeEEEEcchhh-CC--CCCCCeEE
Confidence 458999999999999999999654 8999999999999887653 25689999999863 54 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
|++...-.+... ...+++++.++|||||.+++.+.+.
T Consensus 112 v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 112 VLSSLALHYIAS--------FDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 998764333211 1369999999999999999986553
No 36
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.61 E-value=3.9e-15 Score=127.73 Aligned_cols=105 Identities=22% Similarity=0.414 Sum_probs=88.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|+..++|+|+++.+++.|++++... +.+|+.++.+|+.. ++ ++++++|.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~-~~--~~~~~fD~ 108 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN------GIKNVKFLQANIFS-LP--FEDSSFDH 108 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCGGG-CC--SCTTCEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEccccc-CC--CCCCCeeE
Confidence 45899999999999999999999999999999999999999887653 67799999999874 44 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.+... ...+++++.++|||||.+++..
T Consensus 109 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 109 IFVCFVLEHLQS--------PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEechhhhcCC--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 998764333221 1269999999999999999965
No 37
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=2e-15 Score=124.12 Aligned_cols=116 Identities=15% Similarity=0.123 Sum_probs=94.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +...++|+|+++.+++.|++++... +..|+.++.+|+.. +.++++|.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~-----~~~~~fD~ 128 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALN------GIYDIALQKTSLLA-----DVDGKFDL 128 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT------TCCCCEEEESSTTT-----TCCSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEeccccc-----cCCCCceE
Confidence 458999999999999998875 5679999999999999999887653 66679999999863 23578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|+++.+..+. ..+++++.++|+|||.+++.+........+.+.+...+
T Consensus 129 i~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~G 176 (205)
T 3grz_A 129 IVANILAEIL-----------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENS 176 (205)
T ss_dssp EEEESCHHHH-----------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred EEECCcHHHH-----------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcC
Confidence 9998754332 36899999999999999998666666666777777665
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.60 E-value=3.5e-15 Score=123.50 Aligned_cols=105 Identities=21% Similarity=0.352 Sum_probs=87.4
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. |...++|+|+++.+++.|++++... +++|+.++.+|+.. ++ ++++++|
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~-~~--~~~~~fD 108 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL------GLKNVEVLKSEENK-IP--LPDNTVD 108 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECBTTB-CS--SCSSCEE
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeccccc-CC--CCCCCee
Confidence 4589999999999999999996 7789999999999999999887665 66789999999863 43 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++..-.+... ...+++++.++|+|||.+++.+
T Consensus 109 ~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 109 FIFMAFTFHELSE--------PLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEEESCGGGCSS--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeehhhhhcCC--------HHHHHHHHHHHhCCCeEEEEEE
Confidence 9998765433211 1369999999999999999975
No 39
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=4.3e-15 Score=127.39 Aligned_cols=133 Identities=10% Similarity=0.144 Sum_probs=94.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccC----ccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIP----NYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~----~~~~~ 140 (252)
...|||||||+|.+++.+|++.|...++|||+++.+++.|++++.... ..++. ++.++++|+.+.+. ..+++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~---~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD---NAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG---GTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh---hCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 458999999999999999999998999999999999999988763300 02444 69999999875322 12557
Q ss_pred CcccEEEEeCCCCccc---c-------ccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhc
Q 025492 141 GQLTKMFFLFPDPHFK---E-------KNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLEN 202 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k---~-------~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 202 (252)
+++|.|++|.|--+.. . .++........+++.+.++|+|||.|++......+ ..+.+.+..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~l~~ 184 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSV-AEIIAACGS 184 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGH-HHHHHHHTT
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHH-HHHHHHHHh
Confidence 8999999985533221 0 00111112457999999999999999999877644 345555544
No 40
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=4.1e-15 Score=128.81 Aligned_cols=117 Identities=12% Similarity=0.127 Sum_probs=92.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~d 144 (252)
+..|||+|||+|.+++.+|+..+. .++|+|+|+.+++.|++++... ++.| +.++++|+.+.+. ++++|
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n------~~~~~v~~~~~D~~~~~~----~~~fD 194 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN------KVEDRMSAYNMDNRDFPG----ENIAD 194 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT------TCTTTEEEECSCTTTCCC----CSCEE
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc------CCCceEEEEECCHHHhcc----cCCcc
Confidence 568999999999999999999765 7999999999999999887653 5555 9999999875322 67899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc------hHHHHHHHHHHhcCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV------EELGDWMRSCLENHPM 205 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~------~~~~~~~~~~~~~~~~ 205 (252)
.|+++.|... ..++..+.++|+|||.+++.+.. .+..+.+.+.+...++
T Consensus 195 ~Vi~~~p~~~------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 195 RILMGYVVRT------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp EEEECCCSSG------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred EEEECCchhH------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC
Confidence 9999876433 24999999999999999997754 2344555555655543
No 41
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.60 E-value=6e-15 Score=131.83 Aligned_cols=122 Identities=16% Similarity=0.116 Sum_probs=94.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.+++.+|... |+..++|+|+++.+++.|++++... +++++.++++|+.+ ++ .+...+|
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~------g~~~i~~~~~D~~~-~~--~~~~~~D 274 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS------GLSWIRFLRADARH-LP--RFFPEVD 274 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT------TCTTCEEEECCGGG-GG--GTCCCCS
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc------CCCceEEEeCChhh-Cc--cccCCCC
Confidence 4589999999999999999987 8899999999999999999988664 66699999999874 43 3345689
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
.|++|.|-.+.........-....+++.+.++|+|||.+++.|.+.++...+
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~~ 326 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRA 326 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHHH
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 9999876443211111111123579999999999999999999987665433
No 42
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.60 E-value=5.9e-15 Score=126.15 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=94.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.+++.+|++.+. .++|+|+++.+++.|++++... ++. ++.++++|+.+ +...++++++|
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~------~~~~~v~~~~~D~~~-~~~~~~~~~fD 121 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYN------QLEDQIEIIEYDLKK-ITDLIPKERAD 121 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHT------TCTTTEEEECSCGGG-GGGTSCTTCEE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHC------CCcccEEEEECcHHH-hhhhhccCCcc
Confidence 458999999999999999999765 8999999999999999988654 454 69999999975 43346678999
Q ss_pred EEEEeCCCCcc-----ccc-------cccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcC
Q 025492 145 KMFFLFPDPHF-----KEK-------NHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENH 203 (252)
Q Consensus 145 ~i~~~fpdP~~-----k~~-------h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 203 (252)
.|++|.|--.. ... ++........+++.+.++|+|||.+++........+ +.+.+...
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~l~~~ 191 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLD-IIDIMRKY 191 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHH-HHHHHHHT
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHH-HHHHHHHC
Confidence 99998652111 000 000111224699999999999999999886655444 45555554
No 43
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.60 E-value=5e-16 Score=127.59 Aligned_cols=128 Identities=12% Similarity=0.137 Sum_probs=74.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc-cCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN-YFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~-~~~~~s~d 144 (252)
...|||+|||+|.++..+++..|+..++|+|+++.+++.|++++... +. ++.++++|+.+.++. ....+++|
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF------GA-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh------CC-ceEEEEcchHhhhhhhhhccCccc
Confidence 56899999999999999999999899999999999999998876543 44 899999998752221 00128999
Q ss_pred EEEEeCCCCcccccccccccc------------------CHHHHHHHHHhhcCCcE-EEEEeCchHHHHHHHHHHh
Q 025492 145 KMFFLFPDPHFKEKNHRRRVI------------------SPHLLDEYAYVLGVGGI-IYTITDVEELGDWMRSCLE 201 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~------------------~~~~l~~~~~~LkpgG~-l~~~td~~~~~~~~~~~~~ 201 (252)
.|+++.|--+....++....+ ...+++.+.++|||||. +++.+.. .....+.+.+.
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH-NQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-SCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-ccHHHHHHHHH
Confidence 999986632221111100000 15789999999999999 6665543 33444555555
No 44
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=7.5e-15 Score=122.21 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=83.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCC--CC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFE--KG 141 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~--~~ 141 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++. ++.++.+|+.+.++.... .+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA------NLNDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 45899999999999999999988 789999999999999999888664 555 499999999764432111 15
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.+|.|++..+.++ ...+++.+.++|+|||.+++.
T Consensus 133 ~fD~v~~d~~~~~-----------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 133 PFDFIFIDADKQN-----------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCSEEEECSCGGG-----------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CcCEEEEcCCcHH-----------HHHHHHHHHHhcCCCcEEEEe
Confidence 7999998765332 236999999999999988874
No 45
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.60 E-value=1.2e-14 Score=125.32 Aligned_cols=132 Identities=14% Similarity=0.227 Sum_probs=98.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++...|...++|+|+|+.+++.|++++... +++|+.++++|+... ++++++|.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~------~~~~v~~~~~d~~~~----~~~~~fD~ 179 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL------AIKNIHILQSDWFSA----LAGQQFAM 179 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCSTTGG----GTTCCEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEEcchhhh----cccCCccE
Confidence 45899999999999999999999999999999999999999988765 667899999998642 33678999
Q ss_pred EEEeCCCCcccccc--------cccc---------ccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCccc
Q 025492 146 MFFLFPDPHFKEKN--------HRRR---------VISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEA 208 (252)
Q Consensus 146 i~~~fpdP~~k~~h--------~krr---------~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~ 208 (252)
|+++.|--+....| ..+. -....+++.+.++|+|||.+++..... ..+.+.+.+...+ |..
T Consensus 180 Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~l~~~G-f~~ 257 (276)
T 2b3t_A 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-QGEAVRQAFILAG-YHD 257 (276)
T ss_dssp EEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-CHHHHHHHHHHTT-CTT
T ss_pred EEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-HHHHHHHHHHHCC-CcE
Confidence 99987643322111 1000 012568999999999999999976543 2344555565554 443
Q ss_pred c
Q 025492 209 L 209 (252)
Q Consensus 209 ~ 209 (252)
+
T Consensus 258 v 258 (276)
T 2b3t_A 258 V 258 (276)
T ss_dssp C
T ss_pred E
Confidence 3
No 46
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.60 E-value=7.3e-15 Score=130.22 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=95.3
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhh---cC--CCCcccEEEEeCCcccccCccCC
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRV---SN--PGQYQNISVVRTNSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~---~~--~~~~~nv~~~~~da~~~l~~~~~ 139 (252)
...|||||||+|.++..+|+. .|...++|+|+++.+++.|++++..... .. .....|+.++.+|+.+.+ ..++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~-~~~~ 184 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT-EDIK 184 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc-cccC
Confidence 558999999999999999998 5778999999999999999988765310 00 001368999999987533 1255
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhc
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLEN 202 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 202 (252)
++++|.|+++.++||. ++.++.++|+|||.+++.+...+....+.+.+..
T Consensus 185 ~~~fD~V~~~~~~~~~-------------~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 185 SLTFDAVALDMLNPHV-------------TLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp ---EEEEEECSSSTTT-------------THHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCeeEEEECCCCHHH-------------HHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 6789999999998883 8999999999999999999888777777777664
No 47
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.59 E-value=8.7e-15 Score=124.03 Aligned_cols=103 Identities=20% Similarity=0.323 Sum_probs=86.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++..+. .++|+|+|+.+++.|++++... ++++ +.++++|+. .++ ++++++|
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~~d~~-~~~--~~~~~fD 116 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKA------NCADRVKGITGSMD-NLP--FQNEELD 116 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECCTT-SCS--SCTTCEE
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHc------CCCCceEEEECChh-hCC--CCCCCEE
Confidence 458999999999999999999875 8999999999999999887654 5544 999999985 354 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++..-.+.. ...+++++.++|+|||.+++.+
T Consensus 117 ~v~~~~~l~~~~---------~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 117 LIWSEGAIYNIG---------FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEEEESCSCCCC---------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEecChHhhcC---------HHHHHHHHHHHcCCCcEEEEEE
Confidence 999876544431 2369999999999999999986
No 48
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=3.1e-14 Score=113.85 Aligned_cols=113 Identities=16% Similarity=0.222 Sum_probs=95.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++ +...++|+|+++.+++.|++++... +++|+.++++|+.+. ++++++|.
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~----~~~~~~D~ 103 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF------NIKNCQIIKGRAEDV----LDKLEFNK 103 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT------TCCSEEEEESCHHHH----GGGCCCSE
T ss_pred CCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc------CCCcEEEEECCcccc----ccCCCCcE
Confidence 45899999999999999999 6889999999999999999887653 667899999998752 44578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|+++.+ .. ...+++.+.++ |||.+++.+...+....+.+.+...+
T Consensus 104 i~~~~~-~~-----------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 104 AFIGGT-KN-----------IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp EEECSC-SC-----------HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEECCc-cc-----------HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcC
Confidence 999877 11 23689999888 99999999988888888888998887
No 49
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.59 E-value=1.9e-14 Score=115.84 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=97.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. ..++|+|+++.+++.|++++... +. .++.++.+|+.+.++. .+.+|
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~~---~~~~D 102 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH------GLGDNVTLMEGDAPEALCK---IPDID 102 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT------TCCTTEEEEESCHHHHHTT---SCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc------CCCcceEEEecCHHHhccc---CCCCC
Confidence 4589999999999999999986 78999999999999999887653 55 6899999998653331 15899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 205 (252)
.|++..+.+.. ..+++.+.++|+|||.+++.+........+.+.+...++
T Consensus 103 ~v~~~~~~~~~-----------~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 103 IAVVGGSGGEL-----------QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp EEEESCCTTCH-----------HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred EEEECCchHHH-----------HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 99987654332 369999999999999999998888778888888887764
No 50
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=1.1e-14 Score=121.02 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=79.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC-ccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP-NYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~-~~~~~~s~d 144 (252)
+..|||||||+|.++..+|+..+...++|+|+|+.|++.+.+.... ..|+.++.+|+..... ..+ .+++|
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhccc-cccee
Confidence 4589999999999999999998777999999999988665544322 2589999999864211 113 37899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++.+.|.. ...+++++.++|||||.|++..
T Consensus 129 ~V~~~~~~~~~----------~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIAQKNQ----------IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCCSTTH----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccChhH----------HHHHHHHHHHHhCCCCEEEEEE
Confidence 99998765531 1136899999999999999984
No 51
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=9.9e-15 Score=126.01 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=92.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.+++.+|+..+...++|+|+++.+++.|++++... +++|+.++.+|+.+. +. .+.+|.
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n------~l~~~~~~~~d~~~~-~~---~~~~D~ 189 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN------KLNNVIPILADNRDV-EL---KDVADR 189 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT------TCSSEEEEESCGGGC-CC---TTCEEE
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEECChHHc-Cc---cCCceE
Confidence 56899999999999999999988889999999999999999988653 778999999999753 32 568999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch-----HHHHHHHHHHhc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE-----ELGDWMRSCLEN 202 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~-----~~~~~~~~~~~~ 202 (252)
|+++.|... ..++..+.+.|+|||.+++.+... +......+.+.+
T Consensus 190 Vi~d~p~~~------------~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3a27_A 190 VIMGYVHKT------------HKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAE 239 (272)
T ss_dssp EEECCCSSG------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHH
T ss_pred EEECCcccH------------HHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHH
Confidence 999876411 248999999999999999876543 344444555543
No 52
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=7.8e-15 Score=124.24 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=82.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+.. +..++|+|+|+.+++.|++++... ++ +|+.++++|+.+ ++ + ++++|
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~-~~~fD 105 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL------GVSERVHFIHNDAAG-YV--A-NEKCD 105 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCCTT-CC--C-SSCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc------CCCcceEEEECChHh-CC--c-CCCCC
Confidence 4589999999999999999987 568999999999999998877653 45 489999999874 43 3 78999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-.+.. -...+++++.++|||||.+++..
T Consensus 106 ~V~~~~~~~~~~--------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 106 VAACVGATWIAG--------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEEESCGGGTS--------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEEECCChHhcC--------CHHHHHHHHHHHcCCCeEEEEec
Confidence 999854322211 12369999999999999999964
No 53
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.59 E-value=7.6e-15 Score=121.67 Aligned_cols=111 Identities=16% Similarity=0.077 Sum_probs=84.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-----cEEEEeCCcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-----NISVVRTNSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-----nv~~~~~da~~~l~~~~~~ 140 (252)
...|||||||+|.++..+++..+...++|+|+++.+++.|++++.. .+++ |+.++++|+. .++ +..
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~~~~~~~~v~~~~~d~~-~~~--~~~ 100 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDR------LRLPRNQWERLQLIQGALT-YQD--KRF 100 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTT------CCCCHHHHTTEEEEECCTT-SCC--GGG
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHH------hcCCcccCcceEEEeCCcc-ccc--ccC
Confidence 4589999999999999999998888999999999999999887632 2443 7999999985 233 445
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
+++|.|+++..-.+.... ....+++++.++|||||.+++ +++..+
T Consensus 101 ~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~-~~~~~~ 145 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVT-TPNIEY 145 (217)
T ss_dssp CSCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEE-EEBHHH
T ss_pred CCcCEEeeHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEE-ccCccc
Confidence 799999987543322110 013699999999999995554 555443
No 54
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.59 E-value=1.5e-14 Score=121.25 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=102.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+ .++|+|+|+.+++.|+++. .. ++.++++|+.+ + ++++++|.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~---------~~-~v~~~~~d~~~-~---~~~~~fD~ 106 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRL---------KD-GITYIHSRFED-A---QLPRRYDN 106 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHS---------CS-CEEEEESCGGG-C---CCSSCEEE
T ss_pred CCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhh---------hC-CeEEEEccHHH-c---CcCCcccE
Confidence 34799999999999999999865 7999999999999887643 11 89999999874 3 45789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHH-HhhcCCcEEEEEeCchHHHHHHHHHHhcC-CCcccccccccccCccccCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYA-YVLGVGGIIYTITDVEELGDWMRSCLENH-PMFEALTKEELEADPVVKLL 223 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~-~~LkpgG~l~~~td~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~ 223 (252)
|++...-.+... ...+++++. ++|||||.+++.+.+..........+... +.......... .+.....
T Consensus 107 v~~~~~l~~~~~--------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 176 (250)
T 2p7i_A 107 IVLTHVLEHIDD--------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEF--AHGHRCT 176 (250)
T ss_dssp EEEESCGGGCSS--------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHH--HTTCCCC
T ss_pred EEEhhHHHhhcC--------HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccc--ccccccc
Confidence 998653322211 136999999 99999999999887655443333322111 11111111000 0111112
Q ss_pred CCCCHHHHHHHHcCCCeEEEEE
Q 025492 224 SSATEEGQKVARNGGQTFQAVF 245 (252)
Q Consensus 224 ~~~t~~e~~~~~~G~~i~~~~~ 245 (252)
....+++......|.++-....
T Consensus 177 ~~~~~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 177 YALDTLERDASRAGLQVTYRSG 198 (250)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEee
Confidence 3455778888899998766543
No 55
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=8.4e-15 Score=120.53 Aligned_cols=151 Identities=17% Similarity=0.252 Sum_probs=105.1
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCcccEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
.|||||||+|.++..+++. ++..++|+|+++.+++.|++++... +. +|+.++++|+.. ++ ++++++|.|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~-~~--~~~~~~D~v 115 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA------NLNDRIQIVQGDVHN-IP--IEDNYADLI 115 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECBTTB-CS--SCTTCEEEE
T ss_pred EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc------cccCceEEEEcCHHH-CC--CCcccccEE
Confidence 8999999999999999999 7889999999999999999887653 43 489999999863 44 668899999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc--hHHHHHHHHHHhc-CCCcccccccccccCccccCC
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV--EELGDWMRSCLEN-HPMFEALTKEELEADPVVKLL 223 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~ 223 (252)
+++..-.+... ...+++++.++|+|||.+++.... ..........+.. .+.|...... . ..+
T Consensus 116 ~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----- 180 (219)
T 3dlc_A 116 VSRGSVFFWED--------VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRK-N-ISQ----- 180 (219)
T ss_dssp EEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHH-H-SSH-----
T ss_pred EECchHhhccC--------HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhh-c-ccc-----
Confidence 99865444321 136999999999999999997532 2333333333322 2222211000 0 000
Q ss_pred CCCCHHHHHHHHcCCCeEEE
Q 025492 224 SSATEEGQKVARNGGQTFQA 243 (252)
Q Consensus 224 ~~~t~~e~~~~~~G~~i~~~ 243 (252)
....+++....+.|..+..+
T Consensus 181 ~~~~~~~~~l~~aGf~~v~~ 200 (219)
T 3dlc_A 181 ENVERFQNVLDEIGISSYEI 200 (219)
T ss_dssp HHHHHHHHHHHHHTCSSEEE
T ss_pred CCHHHHHHHHHHcCCCeEEE
Confidence 23356777788888876443
No 56
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.58 E-value=2.9e-15 Score=123.66 Aligned_cols=111 Identities=11% Similarity=-0.004 Sum_probs=77.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhh---cC---CCCcccEEEEeCCcccccCccCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRV---SN---PGQYQNISVVRTNSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~---~~---~~~~~nv~~~~~da~~~l~~~~~ 139 (252)
...|||+|||+|..+..||++ +..|+|||+|+.|++.|+++...... .. .....|+.++++|+.+ ++ ++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-l~--~~ 97 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA-LT--AR 97 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS-ST--HH
T ss_pred CCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc-CC--cc
Confidence 458999999999999999998 67899999999999998765311000 00 0013589999999863 43 33
Q ss_pred C-CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 K-GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~-~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+ +++|.|+....-.+... -....++++++++|||||++++.+
T Consensus 98 ~~~~fD~v~~~~~l~~l~~------~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPA------DMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HHHSEEEEEEESCGGGSCH------HHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred cCCCEEEEEECcchhhCCH------HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3 78999997543222110 011358999999999999855544
No 57
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.58 E-value=7.6e-15 Score=125.52 Aligned_cols=103 Identities=18% Similarity=0.249 Sum_probs=85.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +...++|+|+|+.+++.|++++... ++ +++.++.+|+.+ ++ ++++++|
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~~fD 116 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS------GLQNRVTGIVGSMDD-LP--FRNEELD 116 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECCTTS-CC--CCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc------CCCcCcEEEEcChhh-CC--CCCCCEE
Confidence 458999999999999999999 7789999999999999999887653 44 469999999863 44 5678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++..-.+.. ...+++++.++|||||.+++.+
T Consensus 117 ~i~~~~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 117 LIWSEGAIYNIG---------FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EEEESSCGGGTC---------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEEcCCceecC---------HHHHHHHHHHHcCCCCEEEEEE
Confidence 999876543321 2369999999999999999976
No 58
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.58 E-value=1.3e-14 Score=122.37 Aligned_cols=103 Identities=18% Similarity=0.300 Sum_probs=84.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++...+ .++|+|+++.+++.|++++... +.+|+.++.+|+.. ++ ++++++|.
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~-~~--~~~~~fD~ 90 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEK------GVENVRFQQGTAES-LP--FPDDSFDI 90 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHH------TCCSEEEEECBTTB-CC--SCTTCEEE
T ss_pred CCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHc------CCCCeEEEeccccc-CC--CCCCcEEE
Confidence 45899999999999999999864 8999999999999998887654 66799999999863 54 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++...-.+... ...+++++.++|||||.+++..
T Consensus 91 v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 91 ITCRYAAHHFSD--------VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhccC--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 998764333211 1369999999999999999964
No 59
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.58 E-value=1e-14 Score=122.38 Aligned_cols=101 Identities=22% Similarity=0.293 Sum_probs=82.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|+++. ...++.++.+|+.. ++ ++++++|.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~~~d~~~-~~--~~~~~fD~ 119 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---------EGPDLSFIKGDLSS-LP--FENEQFEA 119 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---------CBTTEEEEECBTTB-CS--SCTTCEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---------ccCCceEEEcchhc-CC--CCCCCccE
Confidence 458999999999999999998 668999999999998876532 45789999999873 44 66889999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|++...-.+... ...+++++.++|+|||.+++.+.
T Consensus 120 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 120 IMAINSLEWTEE--------PLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEEESCTTSSSC--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcChHhhccC--------HHHHHHHHHHHhCCCeEEEEEEc
Confidence 998765444321 12699999999999999999873
No 60
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=7.1e-15 Score=122.57 Aligned_cols=129 Identities=13% Similarity=0.177 Sum_probs=90.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccC---CC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYF---EK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~---~~ 140 (252)
...|||||||+|.+++.+|+..+ +..++|||+++.+++.|++++... ++. ++.++.+|+.+.++... ..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA------GLQDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH------TCGGGEEEEESCHHHHGGGTTTTSCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc------CCCCceEEEECCHHHHHHHHHHhcCC
Confidence 34899999999999999999864 789999999999999999988765 554 69999999976554321 12
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccc
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEAL 209 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~ 209 (252)
+++|.|++.....+.. ....+++.+ ++|+|||.|++..-...-.....+.+..++.|...
T Consensus 133 ~~fD~V~~d~~~~~~~--------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYL--------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp CCCSEEEECSCGGGHH--------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEE
T ss_pred CceEEEEEcCCcccch--------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEE
Confidence 7899999865332211 011356666 99999999987432211122334455555555433
No 61
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.57 E-value=3.2e-14 Score=117.81 Aligned_cols=147 Identities=15% Similarity=0.216 Sum_probs=100.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|++++ . .++.++.+|+.. ++ ++ +++|.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---------~-~~~~~~~~d~~~-~~--~~-~~fD~ 109 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKL---------P-KEFSITEGDFLS-FE--VP-TSIDT 109 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHS---------C-TTCCEESCCSSS-CC--CC-SCCSE
T ss_pred CCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhC---------C-CceEEEeCChhh-cC--CC-CCeEE
Confidence 458999999999999999998 679999999999998887643 2 589999999864 43 33 89999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe---CchHHHHHHHHHHhcCCCcccccccccccCccccC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT---DVEELGDWMRSCLENHPMFEALTKEELEADPVVKL 222 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 222 (252)
|+++..-.+..... ...+++++.++|||||.+++.+ +...........+...+ +...... .. ...
T Consensus 110 v~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~----~~~ 177 (220)
T 3hnr_A 110 IVSTYAFHHLTDDE------KNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRG-FHQLAND-LQ----TEY 177 (220)
T ss_dssp EEEESCGGGSCHHH------HHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTT-CHHHHHH-HH----HSC
T ss_pred EEECcchhcCChHH------HHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCC-Cccchhh-cc----hhh
Confidence 99876543322110 1249999999999999999984 33344444444444333 2222111 00 011
Q ss_pred CCCCCHHHHHHHHcCCCe
Q 025492 223 LSSATEEGQKVARNGGQT 240 (252)
Q Consensus 223 ~~~~t~~e~~~~~~G~~i 240 (252)
.....+++....+.|.++
T Consensus 178 ~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 178 YTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp CCBHHHHHHHHHHTTEEE
T ss_pred cCCHHHHHHHHHHCCCEE
Confidence 124457888888888865
No 62
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.4e-14 Score=125.99 Aligned_cols=104 Identities=18% Similarity=0.243 Sum_probs=85.6
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC----
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK---- 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~---- 140 (252)
...|||||||+|.++..+++.+ +...++|+|+|+.+++.|++++... .....|+.++++|+.+ ++ +.+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~~v~~~~~d~~~-~~--~~~~~~~ 109 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS----PDTYKNVSFKISSSDD-FK--FLGADSV 109 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC----C-CCTTEEEEECCTTC-CG--GGCTTTT
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc----cCCCCceEEEEcCHHh-CC--ccccccc
Confidence 4589999999999999999986 8899999999999999998876541 1235789999999874 43 334
Q ss_pred --CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 141 --GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 141 --~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
+++|.|+++..-.|. . ...+++++.++|+|||.|++
T Consensus 110 ~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 899999998765554 1 23699999999999999988
No 63
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.57 E-value=8.7e-15 Score=127.92 Aligned_cols=129 Identities=13% Similarity=0.143 Sum_probs=91.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+...+++||+++.+++.|++++..... .....+++.++.+|+.+.+.. .++++|.
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~-~~~~~~rv~~~~~D~~~~l~~--~~~~fDv 160 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQ--TSQTFDV 160 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS-SCTTCTTCCEECSCSCC---C--CCCCEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc-ccccCCceEEEEChHHHHHhh--cCCCccE
Confidence 3489999999999999999987788999999999999999987654310 001245899999998765542 4678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHh
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLE 201 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~ 201 (252)
|+++.++|+.. ...+....+++.+.++|+|||.+++.+.. .+....+.+.+.
T Consensus 161 Ii~D~~~p~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~ 216 (294)
T 3adn_A 161 IISDCTDPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLS 216 (294)
T ss_dssp EEECC--------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHH
T ss_pred EEECCCCccCc----chhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHH
Confidence 99999988732 23455678999999999999999998632 234445555554
No 64
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.57 E-value=6.9e-15 Score=122.47 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=83.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCC---
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEK--- 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~--- 140 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++. ++.++++|+.+.++.....
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA------GLSDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC------CCCCceEEEeCCHHHHHHHhhhccCC
Confidence 34899999999999999999987 789999999999999999887654 554 5999999997654422111
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+++|.|++..+.+. ...+++.+.++|+|||.|++.
T Consensus 139 ~~fD~v~~~~~~~~-----------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 139 WQYDLIYIDADKAN-----------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TCEEEEEECSCGGG-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccEEEECCCHHH-----------HHHHHHHHHHhcCCCcEEEEe
Confidence 78999997654211 236999999999999999874
No 65
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=9.6e-15 Score=119.96 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=84.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++...|+..++|+|+++.+++.|++++... +++|+.++++|+.. + .+++++|.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~-~---~~~~~~D~ 135 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL------KLENIEPVQSRVEE-F---PSEPPFDG 135 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT------TCSSEEEEECCTTT-S---CCCSCEEE
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEecchhh-C---CccCCcCE
Confidence 35899999999999999999999999999999999999999887653 67789999999864 2 23578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++.-.++ ..+++.+.++|+|||.+++...
T Consensus 136 i~~~~~~~~------------~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 136 VISRAFASL------------NDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EECSCSSSH------------HHHHHHHTTSEEEEEEEEEEES
T ss_pred EEEeccCCH------------HHHHHHHHHhcCCCcEEEEEeC
Confidence 987532222 2699999999999999999764
No 66
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.57 E-value=2.3e-14 Score=124.82 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=84.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+.++ ..++|+|+|+.+++.|++++... ++. ++.++.+|+.+ + ++++|
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~-----~~~fD 139 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV------DSPRRKEVRIQGWEE-F-----DEPVD 139 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS------CCSSCEEEEECCGGG-C-----CCCCS
T ss_pred cCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc------CCCCceEEEECCHHH-c-----CCCcc
Confidence 45899999999999999999976 78999999999999999887653 454 89999999864 2 67899
Q ss_pred EEEEe-----CCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFL-----FPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~-----fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|+++ +|||+..... -....+++++.++|||||.+++.+.
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGF----ERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCT----THHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEEEcchHHhcCccccccch----hHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 99985 4555311000 0123699999999999999999764
No 67
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.56 E-value=1.2e-14 Score=120.50 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=82.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-----cEEEEeCCcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-----NISVVRTNSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-----nv~~~~~da~~~l~~~~~~ 140 (252)
...|||||||+|.++..+++..|...++|+|+|+.+++.|++++... +++ ++.++.+|+. .++ +.+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~~~~~v~~~~~d~~-~~~--~~~ 100 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID------RLPEMQRKRISLFQSSLV-YRD--KRF 100 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG------GSCHHHHTTEEEEECCSS-SCC--GGG
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh------ccccccCcceEEEeCccc-ccc--ccc
Confidence 45899999999999999999988889999999999999998876432 332 8999999984 333 456
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
+++|.|+++..-.+.... ....+++++.++|||||.++ .+++
T Consensus 101 ~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i-~~~~ 142 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIV-STPN 142 (219)
T ss_dssp TTCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEE-EEEB
T ss_pred CCCCEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEE-Eccc
Confidence 899999986543222100 01269999999999999554 4554
No 68
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.56 E-value=2.1e-14 Score=125.49 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=93.4
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..|||||||+|.++..+++..+...+++||+++.+++.|++++..... ....+++.++.+|+...+.. .++++|.|
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~~--~~~~fD~I 167 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSC--GFDDPRAEIVIANGAEYVRK--FKNEFDVI 167 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHGGG--CSSCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhh--CCCCceEE
Confidence 589999999999999999987788999999999999999987654210 01236899999998765542 35789999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHhc
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLEN 202 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~~ 202 (252)
+++.++||.. ....+....+++.+.++|+|||.+++.+.+ .+....+.+.+.+
T Consensus 168 i~d~~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 224 (296)
T 1inl_A 168 IIDSTDPTAG---QGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISK 224 (296)
T ss_dssp EEEC-------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHH
T ss_pred EEcCCCcccC---chhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHH
Confidence 9999888542 123345678999999999999999998654 2334445555543
No 69
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.56 E-value=1.8e-14 Score=121.03 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=83.5
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+.. |...++|+|+++.+++.+.+++.. ..|+.++.+|+.+.....+.++++|
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCCcEE
Confidence 5589999999999999999985 678999999999988777665432 1689999999874221123467899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.|+++.+.|+.. ..++.++.++|||||.+++.+..
T Consensus 150 ~V~~~~~~~~~~----------~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 150 VIFADVAQPDQT----------RIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEECCCCTTHH----------HHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEcCCCccHH----------HHHHHHHHHHcCCCeEEEEEEcc
Confidence 999988866521 24688999999999999997643
No 70
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.56 E-value=9.9e-15 Score=120.27 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=83.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc--ccEEEEeCCcccccCccCCCCc-
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY--QNISVVRTNSMKYIPNYFEKGQ- 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~--~nv~~~~~da~~~l~~~~~~~s- 142 (252)
...|||+|||+|.+++.++... ...++|+|+|+.|++.|++++... ++ +|+.++++|+.+.+. .+.+++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~------~~~~~~v~~~~~d~~~~~~-~~~~~~~ 125 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTL------KCSSEQAEVINQSSLDFLK-QPQNQPH 125 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT------TCCTTTEEEECSCHHHHTT-SCCSSCC
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHh------CCCccceEEEECCHHHHHH-hhccCCC
Confidence 3589999999999999988774 358999999999999999987653 56 689999999875433 234578
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHH--HHhhcCCcEEEEEeCch
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEY--AYVLGVGGIIYTITDVE 190 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~--~~~LkpgG~l~~~td~~ 190 (252)
+|.|+++.| +... ....+++.+ .++|+|||.+++.+...
T Consensus 126 fD~I~~~~~--~~~~-------~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 126 FDVVFLDPP--FHFN-------LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEEEECCC--SSSC-------HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCEEEECCC--CCCc-------cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999998766 2110 123578888 66799999999988654
No 71
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.56 E-value=2.9e-14 Score=128.65 Aligned_cols=123 Identities=11% Similarity=0.133 Sum_probs=93.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc---cEEEEeCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ---NISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~---nv~~~~~da~~~l~~~~~~~s 142 (252)
...|||+|||+|.+++.+++.+|+..++|||+|+.+++.|++++... ++. ++.|+.+|+.. .+++++
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n------gl~~~~~v~~~~~D~~~----~~~~~~ 292 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN------MPEALDRCEFMINNALS----GVEPFR 292 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------CGGGGGGEEEEECSTTT----TCCTTC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc------CCCcCceEEEEechhhc----cCCCCC
Confidence 36899999999999999999999999999999999999999988764 443 69999999864 355789
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc-hHHHHHHHHHHh
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV-EELGDWMRSCLE 201 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~-~~~~~~~~~~~~ 201 (252)
+|.|+++.|-.+.. ...+-....+++++.++|+|||.++++.+. ..|...+.+.+.
T Consensus 293 fD~Ii~nppfh~~~---~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 293 FNAVLCNPPFHQQH---ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp EEEEEECCCC----------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred eeEEEECCCcccCc---ccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 99999987643211 111112236899999999999999998754 345555555553
No 72
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.56 E-value=2.2e-14 Score=124.34 Aligned_cols=104 Identities=20% Similarity=0.212 Sum_probs=85.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. +..++|+|+++.+++.|++++... ++ +++.++.+|+.. ++ ++++++|
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~-~~--~~~~~fD 152 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQA------GLADNITVKYGSFLE-IP--CEDNSYD 152 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHH------TCTTTEEEEECCTTS-CS--SCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhc------CCCcceEEEEcCccc-CC--CCCCCEe
Confidence 4589999999999999999986 468999999999999999877654 44 579999999863 44 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-.+... ...+++++.++|||||.|++.+
T Consensus 153 ~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 153 FIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEE
Confidence 9998754333211 1369999999999999999975
No 73
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.55 E-value=3.2e-14 Score=119.39 Aligned_cols=102 Identities=11% Similarity=0.142 Sum_probs=80.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC-ccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP-NYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~-~~~~~~s~d 144 (252)
...|||||||+|.++..+|+..+...++|+|+++.+++.|++++. ..+|+.++.+|+..... ..+. +++|
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACA--------ERENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTT--------TCTTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhh--------cCCCeEEEECCCCCcccccccC-ccEE
Confidence 568999999999999999999877899999999999998876542 22789999999864111 1133 6899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+..+++|-. ...+++++.++|+|||.+++.
T Consensus 146 ~v~~~~~~~~~----------~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPNQ----------AEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTTH----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChhH----------HHHHHHHHHHhCCCCcEEEEE
Confidence 99976665521 125899999999999999995
No 74
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=3.6e-15 Score=125.50 Aligned_cols=109 Identities=9% Similarity=0.062 Sum_probs=81.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+ ..++|+|+|+.|++.|+++... .+ .|+.++++|+.+.+ ..++++++|.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~------~~-~~v~~~~~d~~~~~-~~~~~~~fD~ 131 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR------QT-HKVIPLKGLWEDVA-PTLPDGHFDG 131 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGG------CS-SEEEEEESCHHHHG-GGSCTTCEEE
T ss_pred CCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHh------cC-CCeEEEecCHHHhh-cccCCCceEE
Confidence 56899999999999999977643 4899999999999999876532 13 68999999997532 2367889999
Q ss_pred EEE-eCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFF-LFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~-~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++ .++. .....|. .....+++++.++|||||+|++..
T Consensus 132 V~~d~~~~-~~~~~~~---~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPL-SEETWHT---HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCC-BGGGTTT---HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCccc-chhhhhh---hhHHHHHHHHHHhcCCCeEEEEEe
Confidence 998 4443 1111110 011357999999999999998753
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.55 E-value=4.6e-14 Score=114.65 Aligned_cols=104 Identities=14% Similarity=0.118 Sum_probs=84.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|++++... +.+|+.++.+|+.. ++ + ++++|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~-~~--~-~~~~D~ 100 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIE------NLDNLHTRVVDLNN-LT--F-DRQYDF 100 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECCGGG-CC--C-CCCEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhC------CCCCcEEEEcchhh-CC--C-CCCceE
Confidence 348999999999999999998 679999999999999999887654 56789999999874 43 3 788999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.+.... ....+++++.++|+|||.+++.+
T Consensus 101 v~~~~~l~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 101 ILSTVVLMFLEAK------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEESCGGGSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 9988654332211 12469999999999999988765
No 76
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.55 E-value=3.6e-14 Score=121.39 Aligned_cols=104 Identities=23% Similarity=0.394 Sum_probs=85.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. +..++|+|+|+.+++.|++++... ++ +++.++.+|+.+ ++ ++++++|
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~-~~--~~~~~fD 131 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA------GLANRVTFSYADAMD-LP--FEDASFD 131 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECCTTS-CC--SCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc------CCCcceEEEECcccc-CC--CCCCCcc
Confidence 4589999999999999999987 679999999999999998877553 44 479999999864 44 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-.+.... ..+++++.++|||||.+++.+
T Consensus 132 ~v~~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 132 AVWALESLHHMPDR--------GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEEESCTTTSSCH--------HHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEechhhhCCCH--------HHHHHHHHHHcCCCeEEEEEE
Confidence 99987654443211 369999999999999999876
No 77
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=1.4e-14 Score=127.56 Aligned_cols=110 Identities=9% Similarity=0.124 Sum_probs=90.9
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKMF 147 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i~ 147 (252)
.|||||||.|.++..+++.+|+..+++||+++.+++.|++++.. ...++++++.+|+.+.+.. ++++++|.|+
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~------~~~~rv~v~~~Da~~~l~~-~~~~~fDvIi 164 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI------PRAPRVKIRVDDARMVAES-FTPASRDVII 164 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC------CCTTTEEEEESCHHHHHHT-CCTTCEEEEE
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc------cCCCceEEEECcHHHHHhh-ccCCCCCEEE
Confidence 89999999999999999999999999999999999999876521 2356899999999865532 4567999999
Q ss_pred EeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 148 FLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 148 ~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
+...+++.- ...+....|++.+.++|+|||.|++.+-
T Consensus 165 ~D~~~~~~~----~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 165 RDVFAGAIT----PQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp ECCSTTSCC----CGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCcccc----chhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 987777632 1234567899999999999999998764
No 78
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.55 E-value=1.8e-14 Score=126.26 Aligned_cols=122 Identities=13% Similarity=0.102 Sum_probs=84.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcc-----cccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSM-----KYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~-----~~l~~~~~~ 140 (252)
...|||||||+|..+..++... ...|+|||+|+.|++.|+++............-++.|.+.|+. +.++..+++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4589999999998777776653 4689999999999999998765530000000114678787762 123334567
Q ss_pred CcccEEEEeCCCCcc-ccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHH
Q 025492 141 GQLTKMFFLFPDPHF-KEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGD 194 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~-k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~ 194 (252)
+++|.|++.+.-.+. ...| ...++++++++|||||.|++.|.+.+...
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~------~~~~l~~~~r~LkpGG~~i~~~~~~~~~~ 176 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRH------YATVMNNLSELTASGGKVLITTMDGDKLS 176 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTT------HHHHHHHHHHHEEEEEEEEEEEECHHHHT
T ss_pred CCeeEEEECchHHHhCCHHH------HHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 899999987643221 1011 13799999999999999999998765543
No 79
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.55 E-value=1.9e-14 Score=127.89 Aligned_cols=117 Identities=16% Similarity=0.215 Sum_probs=92.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|...+++||+++.+++.|++++..... ....+++.++.+|+.+.+.. ++++++|.
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~--gl~~~rv~~~~~D~~~~l~~-~~~~~fDl 197 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI--GYEDPRVNLVIGDGVAFLKN-AAEGSYDA 197 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGSTTEEEEESCHHHHHHT-SCTTCEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEECCHHHHHHh-ccCCCccE
Confidence 3589999999999999999987888999999999999999987654200 00135899999999765432 34678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|+++.++|+... ..+....+++.+.++|+|||.|++.+++
T Consensus 198 Ii~d~~~p~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 198 VIVDSSDPIGPA----KELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEECCCCTTSGG----GGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCccCcc----hhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 999988887422 2244678999999999999999998654
No 80
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.55 E-value=1e-14 Score=115.81 Aligned_cols=106 Identities=17% Similarity=0.160 Sum_probs=82.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC-CCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF-EKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~-~~~s~d 144 (252)
...|||+|||+|.++..+++..+. ++|+|+++.+++.|++++... ++ |+.++++|+.+.++... ..+++|
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRT------GL-GARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHH------TC-CCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHc------CC-ceEEEeccHHHHHHhhhccCCceE
Confidence 458999999999999999998654 999999999999999888664 45 89999999875333211 124799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHH--HhhcCCcEEEEEeCch
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYA--YVLGVGGIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~--~~LkpgG~l~~~td~~ 190 (252)
.|+++.|-. . ....+++.+. ++|+|||.+++.+...
T Consensus 113 ~i~~~~~~~-~---------~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 113 VAFMAPPYA-M---------DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEEECCCTT-S---------CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEEECCCCc-h---------hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 999875421 0 1225777787 9999999999988653
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=9.1e-15 Score=127.28 Aligned_cols=122 Identities=14% Similarity=0.189 Sum_probs=85.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcC-----------------------------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSN----------------------------- 116 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~----------------------------- 116 (252)
...|||||||+|.++..+|..++...++|||+++.+++.|++++.......
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 458999999999999999999998999999999999999988754321000
Q ss_pred ----------------------CCCc-ccEEEEeCCcccccCc--cCCCCcccEEEEeCCCCccccccccccccCHHHHH
Q 025492 117 ----------------------PGQY-QNISVVRTNSMKYIPN--YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLD 171 (252)
Q Consensus 117 ----------------------~~~~-~nv~~~~~da~~~l~~--~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~ 171 (252)
.... .||.|+++|+...... .+.++++|.|++.....|..-.+ .......+++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~--~~~~~~~~l~ 204 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNW--GDEGLKRMFR 204 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHH--HHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcC--CHHHHHHHHH
Confidence 0001 4899999998631100 13578999999877554431000 0001235999
Q ss_pred HHHHhhcCCcEEEEEeCc
Q 025492 172 EYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 172 ~~~~~LkpgG~l~~~td~ 189 (252)
++.++|+|||.|++.+..
T Consensus 205 ~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHEEEEEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCC
Confidence 999999999999997643
No 82
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.54 E-value=3.8e-14 Score=124.89 Aligned_cols=133 Identities=12% Similarity=0.127 Sum_probs=99.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+...++|||+++.+++.|++++..... .....++++++.+|+.+.++. .++++|.
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~--~~~~fD~ 154 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLER--TEERYDV 154 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHH--CCCCEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHh--cCCCccE
Confidence 3489999999999999999987788999999999999999887654200 000146899999999765542 3678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc-----hHHHHHHHHHHhc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV-----EELGDWMRSCLEN 202 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~-----~~~~~~~~~~~~~ 202 (252)
|+++.++|+.. ......+....+++.+.++|+|||.+++.+.. .+....+.+.+..
T Consensus 155 Ii~d~~~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~ 215 (314)
T 1uir_A 155 VIIDLTDPVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVRE 215 (314)
T ss_dssp EEEECCCCBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHT
T ss_pred EEECCCCcccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHH
Confidence 99999988721 01123345678999999999999999997533 2345556666654
No 83
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.54 E-value=2e-14 Score=122.96 Aligned_cols=111 Identities=9% Similarity=-0.036 Sum_probs=78.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHH---hh--cCC------CCcccEEEEeCCccccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILAL---RV--SNP------GQYQNISVVRTNSMKYI 134 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~---~~--~~~------~~~~nv~~~~~da~~~l 134 (252)
...|||+|||+|..+..||+. +..|+|||+|+.|++.|+++.... .. ... ....++.++++|+.+ +
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~-l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD-L 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT-G
T ss_pred CCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc-C
Confidence 458999999999999999998 678999999999999886543100 00 000 023689999999874 4
Q ss_pred CccCC-CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 135 PNYFE-KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 135 ~~~~~-~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+ +. .++||.|+....--+.... ....+++++.++|||||++++.|
T Consensus 146 ~--~~~~~~FD~V~~~~~l~~l~~~------~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 P--RANIGKFDRIWDRGALVAINPG------DHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp G--GGCCCCEEEEEESSSTTTSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred C--cccCCCEEEEEEhhhhhhCCHH------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 3 22 3799999965332211100 12369999999999999997655
No 84
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.54 E-value=3.9e-14 Score=124.20 Aligned_cols=131 Identities=14% Similarity=0.113 Sum_probs=94.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+...++|||+++.+++.|++++..... ....+++.++.+|+...+.. ..++++|.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~-~~~~~fDv 172 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQ-TPDNTYDV 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHS-SCTTCEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHh-ccCCceeE
Confidence 3589999999999999999887778999999999999999887643211 01346899999999754321 24678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch----HHHHHHHHHHhcC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE----ELGDWMRSCLENH 203 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~----~~~~~~~~~~~~~ 203 (252)
|+++.++|+.. ...+....+++.+.++|+|||.+++.+.+. .....+.+.+.+.
T Consensus 173 Ii~d~~~~~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 173 VIIDTTDPAGP----ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRET 230 (304)
T ss_dssp EEEECC-------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCcccc----chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhC
Confidence 99999887632 223445689999999999999999987653 2344455555443
No 85
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.54 E-value=2.9e-14 Score=126.02 Aligned_cols=130 Identities=13% Similarity=0.088 Sum_probs=97.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|...++|+|+++.+++.|++++.... .....+++.++.+|+.+.+.. .++++|.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~--~~~~~~~v~~~~~D~~~~l~~--~~~~fDv 192 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS--CGYEDKRVNVFIEDASKFLEN--VTNTYDV 192 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS--GGGGSTTEEEEESCHHHHHHH--CCSCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccCCCcEEEEEccHHHHHhh--cCCCceE
Confidence 358999999999999999988778899999999999999987653210 000136899999998764432 2578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch----HHHHHHHHHHhcC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE----ELGDWMRSCLENH 203 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~----~~~~~~~~~~~~~ 203 (252)
|+++.++|+.. ...+....+++.+.++|+|||.+++.+.+. +....+.+.+.+.
T Consensus 193 Ii~d~~~p~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 193 IIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp EEEECCCSSSG----GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred EEECCcCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 99999888732 223445789999999999999999976542 3445555555543
No 86
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=3e-14 Score=124.83 Aligned_cols=104 Identities=25% Similarity=0.364 Sum_probs=86.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. +..++|+|+++.+++.|++++... ++. |+.++.+|+.+ ++ ++++++|
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~~fD 187 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRAREL------RIDDHVRSRVCNMLD-TP--FDKGAVT 187 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECCTTS-CC--CCTTCEE
T ss_pred CCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc------CCCCceEEEECChhc-CC--CCCCCEe
Confidence 5689999999999999999985 578999999999999999887653 444 89999999863 44 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|+.+..-.+.. ...+++++.++|||||.+++.+.
T Consensus 188 ~V~~~~~l~~~~---------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 188 ASWNNESTMYVD---------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp EEEEESCGGGSC---------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCchhhCC---------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 999875433321 24699999999999999999873
No 87
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.54 E-value=1.9e-14 Score=120.70 Aligned_cols=104 Identities=16% Similarity=0.265 Sum_probs=85.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+..|+..++|+|+++.+++.|++++... ++ .++.++.+|+.+.++....++.+|
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL------GLESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT------TCTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEECCHHHHHHhcccCCCcc
Confidence 45899999999999999999999899999999999999999887654 45 469999999875443222257899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+++.+.+. ...+++.+.++|+|||.+++.
T Consensus 129 ~I~~~~~~~~-----------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 129 VLFIDAAKGQ-----------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEEEGGGSC-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCHHH-----------HHHHHHHHHHHcCCCeEEEEE
Confidence 9999865331 236999999999999999885
No 88
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.54 E-value=4.9e-14 Score=121.95 Aligned_cols=130 Identities=16% Similarity=0.130 Sum_probs=100.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+...+++||+++.+++.|++++..... ....+++.++.+|+.+.+.. .++++|.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~--~~~~fD~ 151 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAG--KLDDPRVDVQVDDGFMHIAK--SENQYDV 151 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHT--TTTSTTEEEEESCSHHHHHT--CCSCEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhh--CCCCeeE
Confidence 3489999999999999999887778999999999999999987654310 11346899999999765542 2578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHhcC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLENH 203 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~~~ 203 (252)
|+++.++|+.. ...+....+++.+.++|+|||.+++.+.+ .+....+.+.+.+.
T Consensus 152 Ii~d~~~~~~~----~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 152 IMVDSTEPVGP----AVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp EEESCSSCCSC----CCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 99998887632 22334568999999999999999998654 34455566666554
No 89
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.54 E-value=2.7e-14 Score=117.71 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=83.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.+++.++.+.. ..++|+|+++.|++.|++++... +++|+.++++|+.+.++ ...+++|.
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~D~~~~~~--~~~~~fD~ 125 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATL------KAGNARVVNSNAMSFLA--QKGTPHNI 125 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCHHHHHS--SCCCCEEE
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEECCHHHHHh--hcCCCCCE
Confidence 45899999999999999887742 48999999999999999887654 56799999999876454 24578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHH--hhcCCcEEEEEeCch
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAY--VLGVGGIIYTITDVE 190 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~--~LkpgG~l~~~td~~ 190 (252)
|+++.| +.. . ....+++.+.+ +|+|||.|++.+...
T Consensus 126 V~~~~p--~~~-~------~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 126 VFVDPP--FRR-G------LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp EEECCS--SST-T------THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred EEECCC--CCC-C------cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 998765 211 0 12357788865 599999999988653
No 90
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=4.1e-14 Score=116.85 Aligned_cols=101 Identities=7% Similarity=0.090 Sum_probs=82.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++ +++.++.+|+.+.++. + ++ +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~-~-~~-f 127 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN------GLIDRVELQVGDPLGIAAG-Q-RD-I 127 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH------SGGGGEEEEESCHHHHHTT-C-CS-E
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC------CCCceEEEEEecHHHHhcc-C-CC-C
Confidence 34899999999999999999987 789999999999999999888664 44 4699999999765542 2 35 9
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|.|++..+... ...+++.+.++|+|||.+++.
T Consensus 128 D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 128 DILFMDCDVFN-----------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEEEETTTSC-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CEEEEcCChhh-----------hHHHHHHHHHhcCCCeEEEEE
Confidence 99998753211 246999999999999999874
No 91
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.54 E-value=2.7e-14 Score=117.65 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=82.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. ...++|+|+++.+++.|++++... +++|+.++.+|+.+.+ ...+++|.
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~---~~~~~~D~ 146 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL------DLHNVSTRHGDGWQGW---QARAPFDA 146 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCC---GGGCCEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc------CCCceEEEECCcccCC---ccCCCccE
Confidence 558999999999999999999 679999999999999999887664 6779999999987422 33678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|+++..-++. ...+.++|+|||++++....
T Consensus 147 i~~~~~~~~~--------------~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 147 IIVTAAPPEI--------------PTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEESSBCSSC--------------CTHHHHTEEEEEEEEEEECS
T ss_pred EEEccchhhh--------------hHHHHHhcccCcEEEEEEcC
Confidence 9997655542 23688999999999998754
No 92
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=8.5e-15 Score=117.48 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=82.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++. +...++|+|+++.+++.|++++... ++ +++.++.+|+.+.++. .++.+|
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~~--~~~~fD 102 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT------KAENRFTLLKMEAERAIDC--LTGRFD 102 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT------TCGGGEEEECSCHHHHHHH--BCSCEE
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc------CCCCceEEEECcHHHhHHh--hcCCCC
Confidence 458999999999999999988 5679999999999999999877543 44 4899999998754432 245799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHH--HhhcCCcEEEEEeCch
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYA--YVLGVGGIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~--~~LkpgG~l~~~td~~ 190 (252)
.|+++.| +... ....+++.+. ++|+|||.+++.+...
T Consensus 103 ~i~~~~~--~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 103 LVFLDPP--YAKE-------TIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EEEECCS--SHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEEECCC--CCcc-------hHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 9998754 2110 1235777777 9999999999988653
No 93
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.54 E-value=3.2e-14 Score=121.09 Aligned_cols=104 Identities=14% Similarity=0.155 Sum_probs=84.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccC----C
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYF----E 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~----~ 139 (252)
...|||||||+|.+++.+|+..| +..++|+|+++.+++.|++++... ++ +++.++.+|+.+.++... .
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~------g~~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA------GVDHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT------TCGGGEEEEESCHHHHHHHHHHSGGG
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCCeEEEECCHHHHHHHHHhccCC
Confidence 34899999999999999999987 789999999999999999887654 45 579999999976554221 2
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
++++|.|++..+.+. ...+++.+.++|+|||.|++.
T Consensus 154 ~~~fD~V~~d~~~~~-----------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 154 HGSYDFIFVDADKDN-----------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp TTCBSEEEECSCSTT-----------HHHHHHHHHHHBCTTCCEEEE
T ss_pred CCCEEEEEEcCchHH-----------HHHHHHHHHHhCCCCeEEEEe
Confidence 578999998653211 246999999999999999874
No 94
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=7.2e-14 Score=117.58 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=98.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++ ++.++.+|+.+.+. .++++++|.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~--------------~~~~~~~d~~~~~~-~~~~~~fD~ 104 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEG--------------KFNVVKSDAIEYLK-SLPDKYLDG 104 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHT--------------TSEEECSCHHHHHH-TSCTTCBSE
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHh--------------hcceeeccHHHHhh-hcCCCCeeE
Confidence 458999999999999999998 5679999999999877653 17889999875432 367899999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLSS 225 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 225 (252)
|++...-.+.... ....+++++.++|||||.+++.+.+........... ..|.......
T Consensus 105 i~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 163 (240)
T 3dli_A 105 VMISHFVEHLDPE------RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFY---------------IDPTHKKPVH 163 (240)
T ss_dssp EEEESCGGGSCGG------GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHT---------------TSTTCCSCCC
T ss_pred EEECCchhhCCcH------HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHh---------------cCccccccCC
Confidence 9987543332211 113699999999999999999886644322222111 0111111123
Q ss_pred CCHHHHHHHHcCCCeEEEEEE
Q 025492 226 ATEEGQKVARNGGQTFQAVFR 246 (252)
Q Consensus 226 ~t~~e~~~~~~G~~i~~~~~~ 246 (252)
.........+.|.++-.+.+-
T Consensus 164 ~~~l~~~l~~aGf~~~~~~~~ 184 (240)
T 3dli_A 164 PETLKFILEYLGFRDVKIEFF 184 (240)
T ss_dssp HHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEEe
Confidence 356677777888887666554
No 95
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=4.1e-14 Score=117.44 Aligned_cols=104 Identities=16% Similarity=0.258 Sum_probs=83.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+ .++|+|+++.+++.|++++... + .++.++.+|+.. ++ ++++++|.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~------~-~~~~~~~~d~~~-~~--~~~~~~D~ 106 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR------E-SNVEFIVGDARK-LS--FEDKTFDY 106 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT------T-CCCEEEECCTTS-CC--SCTTCEEE
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc------C-CCceEEECchhc-CC--CCCCcEEE
Confidence 35899999999999999999976 8999999999999998876542 3 689999999863 43 56789999
Q ss_pred EEEeCC--CCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFP--DPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fp--dP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|+++.+ .-+.. ....+++++.++|+|||.+++.+.+
T Consensus 107 v~~~~~~~~~~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 107 VIFIDSIVHFEPL--------ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEESCGGGCCHH--------HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEcCchHhCCHH--------HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 998865 22211 1136999999999999999987654
No 96
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.53 E-value=3.1e-14 Score=121.64 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=93.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.+++.+++..+ .++|+|+++.+++.|++++... +.. +.++.+|+... ++++++|.
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~------~~~-v~~~~~d~~~~----~~~~~fD~ 187 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN------GVR-PRFLEGSLEAA----LPFGPFDL 187 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT------TCC-CEEEESCHHHH----GGGCCEEE
T ss_pred CCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChhhc----CcCCCCCE
Confidence 45899999999999999999855 8999999999999999887653 555 89999998642 34678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|+.+.+..+ ...++..+.++|+|||.+++..........+.+.+.+.+
T Consensus 188 Vv~n~~~~~-----------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~G 235 (254)
T 2nxc_A 188 LVANLYAEL-----------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAG 235 (254)
T ss_dssp EEEECCHHH-----------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred EEECCcHHH-----------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCC
Confidence 999865322 136999999999999999998766666777777777765
No 97
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=3.4e-14 Score=128.32 Aligned_cols=114 Identities=17% Similarity=0.159 Sum_probs=87.8
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhc--CCCCcccEEEEeCCcccccCc---cCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVS--NPGQYQNISVVRTNSMKYIPN---YFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~--~~~~~~nv~~~~~da~~~l~~---~~~ 139 (252)
...|||||||+|.++..+++.. |+..++|+|+|+.+++.|++++...... .....+|+.++.+|+...... .++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 5689999999999999999986 7889999999999999998876543100 001236899999998742111 467
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
++++|.|+.+..-.+... ...+++++.++|||||.|++.+
T Consensus 164 ~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLSTN--------KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp TTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEEEccchhcCCC--------HHHHHHHHHHHcCCCCEEEEEE
Confidence 889999999875444321 1369999999999999999975
No 98
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.53 E-value=2.7e-14 Score=121.15 Aligned_cols=104 Identities=13% Similarity=0.214 Sum_probs=82.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.+ +..++|+|+|+.+++.|++++. ..+++.++.+|+.. ++ ++++++|.
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~~d~~~-~~--~~~~~fD~ 123 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVS--------GNNKIIFEANDILT-KE--FPENNFDL 123 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCC--------SCTTEEEEECCTTT-CC--CCTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhh--------cCCCeEEEECcccc-CC--CCCCcEEE
Confidence 4589999999999999999987 6799999999999988876431 12789999999874 43 66889999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.+.... ....+++++.++|||||.+++.+
T Consensus 124 v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 124 IYSRDAILALSLE------NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHHHHHHhcChH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 9987654332100 12369999999999999999976
No 99
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.52 E-value=3e-14 Score=123.75 Aligned_cols=129 Identities=13% Similarity=0.096 Sum_probs=97.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|..+..+++..|...+++||+++.+++.|++++.... .....+++.++.+|+.+.+.. .++++|.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~--~~~~~~~v~~~~~D~~~~l~~--~~~~fD~ 154 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS--CGYEDKRVNVFIEDASKFLEN--VTNTYDV 154 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS--GGGGSTTEEEEESCHHHHHHH--CCSCEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhc--cccCCCcEEEEECChHHHHHh--CCCCceE
Confidence 348999999999999999988778899999999999999987653210 000146899999999765542 2678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHhc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLEN 202 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~~ 202 (252)
|+++.++|+.. ...+.+..+++.+.++|+|||.+++.+.+ .+....+.+.+.+
T Consensus 155 Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 211 (283)
T 2i7c_A 155 IIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKK 211 (283)
T ss_dssp EEEECCCTTTG----GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHT
T ss_pred EEEcCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHH
Confidence 99998888732 23445678999999999999999998653 2344555555544
No 100
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.52 E-value=5.6e-14 Score=121.85 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=93.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCC-------CcccEEEEeCCcccccCccC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPG-------QYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~-------~~~nv~~~~~da~~~l~~~~ 138 (252)
...|||||||+|.++..+++. +...++|||+++.+++.|++++ ... ... ..+++.++.+|+.+.+..
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~--~~l~~~~~~~~~~~v~~~~~D~~~~l~~-- 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KID--NGLLEAMLNGKHEKAKLTIGDGFEFIKN-- 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTT--TTHHHHHHTTCCSSEEEEESCHHHHHHH--
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhc--cccccccccCCCCcEEEEECchHHHhcc--
Confidence 348999999999999999998 8889999999999999998765 210 000 236899999998765542
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHh
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLE 201 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~ 201 (252)
++++|.|+++.++|+.. ...+....+++.+.++|+|||.+++.+.. .+....+.+.+.
T Consensus 150 -~~~fD~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 211 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGP----AKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMK 211 (281)
T ss_dssp -CCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHH
T ss_pred -cCCeeEEEECCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHH
Confidence 57899999999988632 22334578999999999999999997643 334444444443
No 101
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=3e-14 Score=120.66 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=83.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++...|...++|+|+|+.+++.|+++ .+|+.++.+|+.. ++ +++++|.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----------~~~~~~~~~d~~~-~~---~~~~fD~ 98 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----------LPNTNFGKADLAT-WK---PAQKADL 98 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----------STTSEEEECCTTT-CC---CSSCEEE
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----------CCCcEEEECChhh-cC---ccCCcCE
Confidence 4589999999999999999999888999999999999887653 3579999999864 43 4789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++..-.|... ...+++++.++|+|||.+++.+.
T Consensus 99 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVPD--------HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGSTT--------HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCCC--------HHHHHHHHHHhcCCCeEEEEEeC
Confidence 999876555421 13699999999999999999874
No 102
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.52 E-value=4.4e-15 Score=126.10 Aligned_cols=104 Identities=11% Similarity=0.105 Sum_probs=84.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCC---C
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFE---K 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~---~ 140 (252)
...|||||||+|..++.+|+..| +..++|||+++.+++.|++++... ++ ++|.++.+|+.+.++.... +
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------g~~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA------KQEHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT------TCTTTEEEEESCHHHHHHHHHHHHCS
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEEcCHHHHHHHHhhccCC
Confidence 34899999999999999999876 789999999999999999888664 55 4899999999765542211 4
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+++|.|++..+.+. ...+++.+.++|+|||.|++.
T Consensus 135 ~~fD~V~~d~~~~~-----------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 135 HQFDFIFIDADKTN-----------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SCEEEEEEESCGGG-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEeEEEEcCChHH-----------hHHHHHHHHHhcCCCeEEEEE
Confidence 78999998754111 235899999999999999983
No 103
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.52 E-value=3.4e-14 Score=114.41 Aligned_cols=108 Identities=20% Similarity=0.145 Sum_probs=82.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCcc-CCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNY-FEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~-~~~~s~ 143 (252)
...|||+|||+|.++..+++. +...++|+|+++.+++.|++++... ++ +|+.++++|+.+.+... +.++++
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAIT------KEPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHH------TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHh------CCCcceEEEECcHHHHHHHHHhcCCCC
Confidence 458999999999999998884 5578999999999999999888665 44 58999999987533211 125789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHH--HHhhcCCcEEEEEeCc
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEY--AYVLGVGGIIYTITDV 189 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~--~~~LkpgG~l~~~td~ 189 (252)
|.|+++.| +... ....+++.+ .++|+|||.+++.+..
T Consensus 118 D~i~~~~~--~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 118 DLVLLDPP--YAKQ-------EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEEECCC--GGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CEEEECCC--CCch-------hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 99998765 2111 123567777 8889999999998754
No 104
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.52 E-value=3.4e-14 Score=120.49 Aligned_cols=102 Identities=21% Similarity=0.324 Sum_probs=83.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++++ . ...+|+.++.+|+.. ++ ++++++|.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~------~~~~~~~~~~~d~~~-~~--~~~~~fD~ 107 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-A------GVDRKVQVVQADARA-IP--LPDESVHG 107 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-T------TSCTTEEEEESCTTS-CC--SCTTCEEE
T ss_pred CCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-h------ccCCceEEEEccccc-CC--CCCCCeeE
Confidence 458999999999999999998 578999999999999888764 1 246789999999863 44 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.|... ...+++++.++|+|||.+++..
T Consensus 108 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 108 VIVVHLWHLVPD--------WPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp EEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhcCC--------HHHHHHHHHHHCCCCcEEEEEe
Confidence 999876555421 1369999999999999999873
No 105
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=9e-14 Score=113.65 Aligned_cols=102 Identities=13% Similarity=0.056 Sum_probs=82.1
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKMF 147 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i~ 147 (252)
.|||||||+|.++..+++. +..++|+|+++.+++.|++++... +. ++.++.+|+.. ++ ++++++|.|+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~------~~-~~~~~~~d~~~-~~--~~~~~fD~v~ 99 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK------GV-KITTVQSNLAD-FD--IVADAWEGIV 99 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH------TC-CEEEECCBTTT-BS--CCTTTCSEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc------CC-ceEEEEcChhh-cC--CCcCCccEEE
Confidence 8999999999999999987 569999999999999998877653 33 89999999864 43 5678999999
Q ss_pred EeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 148 FLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 148 ~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
+.+.. +.. -....+++++.++|+|||.+++.+..
T Consensus 100 ~~~~~-~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 100 SIFCH-LPS-------SLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp EECCC-CCH-------HHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred EEhhc-CCH-------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 87532 110 01236999999999999999998754
No 106
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=4.6e-14 Score=115.51 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=80.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.. +..++|+|+++.+++.|+++ .+++.++.+|+.. ++ ++++++|.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~~d~~~-~~--~~~~~fD~ 105 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQT-----------HPSVTFHHGTITD-LS--DSPKRWAG 105 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHH-----------CTTSEEECCCGGG-GG--GSCCCEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh-----------CCCCeEEeCcccc-cc--cCCCCeEE
Confidence 347999999999999999998 56899999999999887753 3479999999874 44 56789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++..-.+.... ....+++++.++|+|||.+++.+.
T Consensus 106 v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 106 LLAWYSLIHMGPG------ELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp EEEESSSTTCCTT------THHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEehhhHhcCCHH------HHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9987654332110 123699999999999999999763
No 107
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=1.6e-13 Score=119.21 Aligned_cols=124 Identities=11% Similarity=0.148 Sum_probs=90.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCcc-
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQL- 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~- 143 (252)
...|||||||+|.+++.+|.. |+.+++|+|+|+.+++.|++++... ++.| +.|+++|+.+.++ +++
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~------~l~~~v~~~~~D~~~~~~-----~~f~ 191 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH------GVSDRFFVRKGEFLEPFK-----EKFA 191 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT------TCTTSEEEEESSTTGGGG-----GGTT
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc------CCCCceEEEECcchhhcc-----cccC
Confidence 358999999999999999999 9999999999999999999988664 6665 9999999875332 467
Q ss_pred --cEEEEeCCCCcccc------cccccccc-----CHHHHHHHH-HhhcCCcEEEEEeCchHHHHHHHHHHhc
Q 025492 144 --TKMFFLFPDPHFKE------KNHRRRVI-----SPHLLDEYA-YVLGVGGIIYTITDVEELGDWMRSCLEN 202 (252)
Q Consensus 144 --d~i~~~fpdP~~k~------~h~krr~~-----~~~~l~~~~-~~LkpgG~l~~~td~~~~~~~~~~~~~~ 202 (252)
|.|+.|.|--.... +|..+..+ ...+++.+. +.|+|||.+++.... ...+.+.+.+.+
T Consensus 192 ~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~-~q~~~v~~~~~~ 263 (284)
T 1nv8_A 192 SIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE-DQVEELKKIVSD 263 (284)
T ss_dssp TCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT-TCHHHHTTTSTT
T ss_pred CCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc-hHHHHHHHHHHh
Confidence 99999854211110 01111000 126899999 999999999997765 344444444443
No 108
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=1.2e-13 Score=115.57 Aligned_cols=91 Identities=9% Similarity=0.130 Sum_probs=76.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC-CCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE-KGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~-~~s~d 144 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|+++ .+|+.++++|+.+.++ ++ ++++|
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~d~~~~~~--~~~~~~fD 113 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----------APHADVYEWNGKGELP--AGLGAPFG 113 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----------CTTSEEEECCSCSSCC--TTCCCCEE
T ss_pred CCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----------CCCceEEEcchhhccC--CcCCCCEE
Confidence 458999999999999999999 67999999999999888754 3479999999854454 55 78999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|+.+ +++. .+++++.++|||||.++.
T Consensus 114 ~v~~~-~~~~-------------~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 114 LIVSR-RGPT-------------SVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEEE-SCCS-------------GGGGGHHHHEEEEEEEEE
T ss_pred EEEeC-CCHH-------------HHHHHHHHHcCCCcEEEE
Confidence 99987 3332 489999999999999983
No 109
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.52 E-value=5.1e-14 Score=121.57 Aligned_cols=116 Identities=17% Similarity=0.165 Sum_probs=88.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC--CCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF--EKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~--~~~s 142 (252)
...|||+|||+|..+..+|+..++ ..++|+|+++.+++.+++++... +++|+.++++|+.. +...+ ..+.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~------g~~~v~~~~~D~~~-~~~~~~~~~~~ 156 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM------GVLNTIIINADMRK-YKDYLLKNEIF 156 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCHHH-HHHHHHHTTCC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh------CCCcEEEEeCChHh-cchhhhhcccc
Confidence 568999999999999999998766 79999999999999999887654 67799999999874 32111 2568
Q ss_pred ccEEEEeCCCCcc----------ccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 143 LTKMFFLFPDPHF----------KEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 143 ~d~i~~~fpdP~~----------k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
+|.|+++.|.... ........-.+..+++.+.++|||||.+++.|-
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 9999998653211 000011112346799999999999999999773
No 110
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.52 E-value=6.1e-15 Score=125.33 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=78.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCC---CC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFE---KG 141 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~---~~ 141 (252)
...|||||||+|.++..+|...|+..++|+|+++.|++.|++++... ++.+ +.++++|+.+.+...++ ++
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN------NLSDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc------CCCccEEEEEcchhhhhhhhhhcccCC
Confidence 45899999999999999999988889999999999999999887653 5554 99999998642222344 26
Q ss_pred cccEEEEeCCCCccc-c------ccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFK-E------KNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k-~------~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
++|.|+++.|--+.. . +..++......++..+.++|||||.+.+.
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 899999986532211 0 00111112235778899999999988764
No 111
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=4.1e-14 Score=116.91 Aligned_cols=106 Identities=12% Similarity=0.133 Sum_probs=82.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.. ..++|+|+++.+++.|++++. ..+|+.++++|+.. ++ +++++|.
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~~d~~~-~~---~~~~fD~ 117 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTK--------RWSHISWAATDILQ-FS---TAELFDL 117 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTT--------TCSSEEEEECCTTT-CC---CSCCEEE
T ss_pred CCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcc--------cCCCeEEEEcchhh-CC---CCCCccE
Confidence 4589999999999999999984 589999999999999887642 23489999999874 33 4789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
|+++..-.+..... ....+++++.++|||||.+++.+...
T Consensus 118 v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 118 IVVAEVLYYLEDMT-----QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEEESCGGGSSSHH-----HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEccHHHhCCCHH-----HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99975443322110 01258999999999999999987544
No 112
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=1.2e-13 Score=115.26 Aligned_cols=104 Identities=16% Similarity=0.108 Sum_probs=81.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.++..+|+.. |...++|+|+++.+++.+.+++. ..+|+.++.+|+.........++++|
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~--------~~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVE--------ERRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHS--------SCTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHh--------ccCCCEEEEccCCCcchhhcccCCce
Confidence 4589999999999999999884 66899999999999988876542 22789999999864211011245899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++.+.|+.. ..++.++.++|||||.+++..
T Consensus 146 ~v~~~~~~~~~~----------~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 146 VIFEDVAQPTQA----------KILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEECCCSTTHH----------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCHhHH----------HHHHHHHHHhcCCCCEEEEEE
Confidence 999988765521 136999999999999999874
No 113
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.51 E-value=5.1e-14 Score=121.78 Aligned_cols=105 Identities=18% Similarity=0.292 Sum_probs=84.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|. ..++|+|+|+.+++.|++++... + .|+.++.+|+.+ ++ + ++++|
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~-~~v~~~~~d~~~-~~--~-~~~fD 91 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL------P-YDSEFLEGDATE-IE--L-NDKYD 91 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS------S-SEEEEEESCTTT-CC--C-SSCEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc------C-CceEEEEcchhh-cC--c-CCCee
Confidence 458999999999999999999984 89999999999999998876432 2 389999999874 43 3 56999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.|++...-.+... ...+++++.++|||||.+++...+
T Consensus 92 ~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMTT--------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCSS--------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCCC--------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 9998764332211 136999999999999999987655
No 114
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.51 E-value=4.2e-14 Score=119.09 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=83.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.. ...++|+|+++.+++.|++++... +..++.++.+|+.. ++ ++++++|.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~-~~--~~~~~fD~ 149 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE------GKRVRNYFCCGLQD-FT--PEPDSYDV 149 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG------GGGEEEEEECCGGG-CC--CCSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc------CCceEEEEEcChhh-cC--CCCCCEEE
Confidence 4589999999999999999887 568999999999999988765332 35679999999863 43 45678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|++...-.+.... ....+++++.++|+|||.+++.+.
T Consensus 150 v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 150 IWIQWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEEc
Confidence 9988643332110 013699999999999999999764
No 115
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=6.4e-14 Score=115.75 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=84.0
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. |...++|+|+++.+++.|++++... +.+|+.++.+|+...+ ..++++|
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~---~~~~~fD 148 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL------GYDNVIVIVGDGTLGY---EPLAPYD 148 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEESCGGGCC---GGGCCEE
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEECCcccCC---CCCCCee
Confidence 4589999999999999999986 6689999999999999999887664 6778999999985322 2257899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
.|+++.+.++ +.+.+.++|+|||.+++.+...
T Consensus 149 ~v~~~~~~~~--------------~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 149 RIYTTAAGPK--------------IPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEESSBBSS--------------CCHHHHHTEEEEEEEEEEESSS
T ss_pred EEEECCchHH--------------HHHHHHHHcCCCcEEEEEECCC
Confidence 9998876554 2358899999999999988654
No 116
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.51 E-value=8.4e-14 Score=122.17 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=85.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+...+++||+++.+++.|++++..... ....+++.++.+|+.+.++. .++++|.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~--~~~~~rv~v~~~Da~~~l~~--~~~~fD~ 171 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAI--GYSSSKLTLHVGDGFEFMKQ--NQDAFDV 171 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHT--CSSCEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHhh--CCCCceE
Confidence 3489999999999999999987788999999999999999987654210 00236899999999765542 3678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++.++|+... ..+....+++.+.++|+|||.+++.+
T Consensus 172 Ii~d~~~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 172 IITDSSDPMGPA----ESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEECC---------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCCCCcc----hhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999998876321 12334579999999999999999976
No 117
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.51 E-value=6.7e-14 Score=117.99 Aligned_cols=105 Identities=12% Similarity=0.181 Sum_probs=84.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCcc------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNY------ 137 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~------ 137 (252)
...|||||||+|.++..+|+..| ...++|+|+++.+++.|++++... +..+ +.++.+|+.+.++..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------g~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN------GLENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT------TCGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCCEEEEECCHHHHHHHHHhhccc
Confidence 45899999999999999999987 689999999999999999887653 5554 999999987543321
Q ss_pred ------CCC--CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 138 ------FEK--GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 138 ------~~~--~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++ +++|.|++....+. ...+++.+.++|+|||.+++..
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~~~~-----------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDADKEN-----------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSCGGG-----------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccCCCCCcCEEEEeCCHHH-----------HHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999998754221 1368999999999999999864
No 118
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=2e-13 Score=117.49 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=99.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++ ++..++|+|+|+.|++.|+++ .+|+.++.+|+.. ++ + ++++|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~~d~~~-~~--~-~~~fD~ 120 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQN-----------YPHLHFDVADARN-FR--V-DKPLDA 120 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHH-----------CTTSCEEECCTTT-CC--C-SSCEEE
T ss_pred CCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhh-----------CCCCEEEECChhh-CC--c-CCCcCE
Confidence 45899999999999999999 678999999999999887653 2578999999864 54 3 579999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch----HHHHHHHHHHhcCCCcccccccccccCcccc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE----ELGDWMRSCLENHPMFEALTKEELEADPVVK 221 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 221 (252)
|+++..-.|... ...+++++.++|||||.+++.+... .....+...+...+.. ... . ..+.
T Consensus 121 v~~~~~l~~~~d--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~-- 185 (279)
T 3ccf_A 121 VFSNAMLHWVKE--------PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIH--NPQ--A-LNPW-- 185 (279)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCC--CGG--G-GCCC--
T ss_pred EEEcchhhhCcC--------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCc--ccc--C-cCce--
Confidence 998765444321 1369999999999999999976543 2222233333222210 000 0 1111
Q ss_pred CCCCCCHHHHHHHHcCCCeEEE
Q 025492 222 LLSSATEEGQKVARNGGQTFQA 243 (252)
Q Consensus 222 ~~~~~t~~e~~~~~~G~~i~~~ 243 (252)
......++.....+.|.++-.+
T Consensus 186 ~~~~~~~~~~~l~~aGf~~~~~ 207 (279)
T 3ccf_A 186 YFPSIGEYVNILEKQGFDVTYA 207 (279)
T ss_dssp CCCCHHHHHHHHHHHTEEEEEE
T ss_pred eCCCHHHHHHHHHHcCCEEEEE
Confidence 1133456777778888876444
No 119
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.50 E-value=2.1e-14 Score=125.45 Aligned_cols=107 Identities=15% Similarity=0.183 Sum_probs=83.0
Q ss_pred CceEEEEcCcccHHHHHHH-HHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLS-TLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA-~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+| ...|+..++|+|+++.+++.|++++.. .+.. ++.++++|+.+ ++ ++ +++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~~--~~-~~f 188 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAG------HALAGQITLHRQDAWK-LD--TR-EGY 188 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTT------STTGGGEEEEECCGGG-CC--CC-SCE
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHh------cCCCCceEEEECchhc-CC--cc-CCe
Confidence 4589999999999999997 567899999999999999999887643 2444 59999999874 43 44 899
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+++.+-.+..... ....+++++.++|||||.+++.+
T Consensus 189 D~v~~~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDA-----RVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EEEECCSSGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEECChhhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999865332211100 11248999999999999999966
No 120
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.50 E-value=3e-14 Score=118.58 Aligned_cols=112 Identities=14% Similarity=0.211 Sum_probs=82.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.. +..++|+|+++.+++.|++++.... .......++.++.+|+.. ++ ++++++|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~~~-~~--~~~~~~D~ 104 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENASS-LS--FHDSSFDF 104 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCTTS-CC--SCTTCEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecccc-cC--CCCCceeE
Confidence 458999999999999999998 6699999999999999887653210 000012378999999863 43 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++..-.+..... ....+++++.++|+|||.+++.+-
T Consensus 105 v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 105 AVMQAFLTSVPDPK-----ERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEESCGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhcCCCHH-----HHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99875433221100 012599999999999999999764
No 121
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.50 E-value=8.5e-14 Score=122.65 Aligned_cols=113 Identities=19% Similarity=0.238 Sum_probs=86.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|..+..+|+..+ ...++|+|+++.+++.+++++... ++.|+.++++|+.. ++. .++++|
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~------g~~~v~~~~~D~~~-~~~--~~~~fD 189 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL------GVLNVILFHSSSLH-IGE--LNVEFD 189 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------TCCSEEEESSCGGG-GGG--GCCCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh------CCCeEEEEECChhh-ccc--ccccCC
Confidence 56899999999999999999864 578999999999999999988765 77799999999874 432 356899
Q ss_pred EEEEeCCCC----ccccccccc----------cccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDP----HFKEKNHRR----------RVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP----~~k~~h~kr----------r~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++.|.. +.+....+. .-.+..+++.+.++|||||++++.|
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 999986621 100000000 1123579999999999999999976
No 122
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.50 E-value=5.4e-14 Score=117.32 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=83.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCC---
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEK--- 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~--- 140 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++ .++.++.+|+.+.++.....
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------g~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA------EAEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT------TCTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC------CCCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 45899999999999999999877 789999999999999999887653 44 58999999987544322111
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+++|.|++..+... ...+++.+.++|+|||.+++.
T Consensus 144 ~~~D~v~~d~~~~~-----------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 144 GTFDVAVVDADKEN-----------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp TCEEEEEECSCSTT-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccEEEECCCHHH-----------HHHHHHHHHHHcCCCeEEEEE
Confidence 68999998654221 236999999999999999884
No 123
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.50 E-value=1.3e-13 Score=118.89 Aligned_cols=104 Identities=15% Similarity=0.171 Sum_probs=83.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++++... ++ ++.++.+|+.. ++ + ++++|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~------~~-~~~~~~~d~~~-~~--~-~~~fD~ 187 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE------NL-NISTALYDINA-AN--I-QENYDF 187 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT------TC-CEEEEECCGGG-CC--C-CSCEEE
T ss_pred CCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc------CC-ceEEEEecccc-cc--c-cCCccE
Confidence 558999999999999999998 568999999999999999887653 55 89999999874 33 2 789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++.+-.+... -....+++++.++|+|||.+++.++
T Consensus 188 i~~~~~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 188 IVSTVVFMFLNR------ERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp EEECSSGGGSCG------GGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEccchhhCCH------HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 998764433211 1123699999999999999888764
No 124
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=9.9e-14 Score=113.89 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=85.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+. .++|+|+++.+++.|++++. ..+++.++.+|+.. ++ ++++++|.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~--------~~~~i~~~~~d~~~-~~--~~~~~fD~ 110 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYA--------HVPQLRWETMDVRK-LD--FPSASFDV 110 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTT--------TCTTCEEEECCTTS-CC--SCSSCEEE
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcc--------cCCCcEEEEcchhc-CC--CCCCcccE
Confidence 458999999999999999998654 89999999999998876542 24689999999864 43 66789999
Q ss_pred EEEeC---------CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH
Q 025492 146 MFFLF---------PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE 191 (252)
Q Consensus 146 i~~~f---------pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~ 191 (252)
|+.+. ++||....++.. ....+++++.++|+|||.+++.+....
T Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 111 VLEKGTLDALLAGERDPWTVSSEGVH--TVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp EEEESHHHHHTTTCSCTTSCCHHHHH--HHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred EEECcchhhhccccccccccccchhH--HHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 99753 345543211111 124699999999999999999887653
No 125
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.49 E-value=5.5e-14 Score=121.56 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=86.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.. +..++|+|+|+.|++.|++++.... ......++.+..+|+.......++++++|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRR--KEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT--TSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcc--cccccceeeEeecChhhCccccccCCCeEE
Confidence 458999999999999999998 4589999999999999987764321 112346799999998642222256789999
Q ss_pred EEEe-CCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHH
Q 025492 146 MFFL-FPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELG 193 (252)
Q Consensus 146 i~~~-fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~ 193 (252)
|++. ..-.+..... ...-....+++++.++|||||.+++.+.+.+..
T Consensus 134 V~~~g~~l~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 134 VICLGNSFAHLPDSK-GDQSEHRLALKNIASMVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp EEECTTCGGGSCCSS-SSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred EEEcChHHhhcCccc-cCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHH
Confidence 9986 3221111100 000012369999999999999999998775543
No 126
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.49 E-value=1e-13 Score=114.12 Aligned_cols=103 Identities=12% Similarity=0.138 Sum_probs=82.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.. +..++|+|+++.+++.|++ .+.+|+.++++|+.. + ++++++|.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----------~~~~~~~~~~~d~~~-~---~~~~~~D~ 110 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----------HGLDNVEFRQQDLFD-W---TPDRQWDA 110 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----------GCCTTEEEEECCTTS-C---CCSSCEEE
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----------cCCCCeEEEeccccc-C---CCCCceeE
Confidence 458999999999999999999 6799999999999987764 256789999999864 2 56889999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
|+++..-.+.... ....+++++.++|+|||.+++.+.+.
T Consensus 111 v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 111 VFFAHWLAHVPDD------RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEechhhcCCHH------HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9987643332110 01369999999999999999987654
No 127
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.49 E-value=8.7e-14 Score=117.56 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=83.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccC----C
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYF----E 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~----~ 139 (252)
...|||||||+|..++.+|+..| +..++++|+++.+++.|++++... ++. ++.++.+|+.+.++... .
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------g~~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA------GVEHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT------TCGGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEEcCHHHHHHHHHhccCC
Confidence 34899999999999999999987 789999999999999999888654 554 69999999976554221 2
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
++++|.|++..+.+ ....+++.+.++|+|||.|++.
T Consensus 145 ~~~fD~I~~d~~~~-----------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 145 EGSYDFGFVDADKP-----------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp TTCEEEEEECSCGG-----------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCEEEECCchH-----------HHHHHHHHHHHhcCCCeEEEEe
Confidence 57899999863211 1246999999999999999874
No 128
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.49 E-value=5.3e-14 Score=120.27 Aligned_cols=102 Identities=21% Similarity=0.369 Sum_probs=84.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|+..++|+|+++.+++.|+++ ..++.++.+|+.. ++ ++++++|.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~d~~~-~~--~~~~~fD~ 151 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR-----------YPQVTFCVASSHR-LP--FSDTSMDA 151 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH-----------CTTSEEEECCTTS-CS--BCTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh-----------CCCcEEEEcchhh-CC--CCCCceeE
Confidence 5589999999999999999998888999999999999887653 2468899999863 44 56789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
|+.++.. .+++++.++|||||.+++.+........+
T Consensus 152 v~~~~~~---------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 152 IIRIYAP---------------CKAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp EEEESCC---------------CCHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred EEEeCCh---------------hhHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 9987641 26899999999999999998776544433
No 129
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.49 E-value=1.5e-13 Score=115.20 Aligned_cols=105 Identities=16% Similarity=0.238 Sum_probs=82.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++... ..++|+|+++.+++.|+++. ...++.++.+|+.. ++ ++++++|.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~~~d~~~-~~--~~~~~fD~ 110 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAG---------PDTGITYERADLDK-LH--LPQDSFDL 110 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTS---------CSSSEEEEECCGGG-CC--CCTTCEEE
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhc---------ccCCceEEEcChhh-cc--CCCCCceE
Confidence 45899999999999999999832 38999999999998887543 22479999999874 43 56789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE 191 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~ 191 (252)
|++...-.+... ...+++++.++|+|||.+++.+.+..
T Consensus 111 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~~~~ 148 (243)
T 3bkw_A 111 AYSSLALHYVED--------VARLFRTVHQALSPGGHFVFSTEHPI 148 (243)
T ss_dssp EEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred EEEeccccccch--------HHHHHHHHHHhcCcCcEEEEEeCCcc
Confidence 998764333211 23699999999999999999886643
No 130
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=6.1e-14 Score=117.55 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=81.0
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..|||||||+|.++..++.. +..++|+|+|+.+++.|++++... ....++.++.+|+.. + .+++++|.|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~-~---~~~~~fD~v 136 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSS-----PKAEYFSFVKEDVFT-W---RPTELFDLI 136 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTS-----GGGGGEEEECCCTTT-C---CCSSCEEEE
T ss_pred CCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhcc-----CCCcceEEEECchhc-C---CCCCCeeEE
Confidence 48999999999999999874 778999999999999998776321 234689999999874 3 245699999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+.+..-.+.... ....+++++.++|+|||.+++..
T Consensus 137 ~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 137 FDYVFFCAIEPE------MRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp EEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEEEE
Confidence 987654332210 12369999999999999999865
No 131
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=1.1e-13 Score=115.38 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=83.7
Q ss_pred CceEEEEcCcccHHHHHHHHHC-----CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC-----cccEEEEeCCcccccC
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-----PEVLMIGMELRDKVTEYVKERILALRVSNPGQ-----YQNISVVRTNSMKYIP 135 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-----p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~-----~~nv~~~~~da~~~l~ 135 (252)
...|||||||+|.++..+++.. |...++|+|+++.+++.|++++... + ..|+.++.+|+...+.
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD------KPELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH------CGGGGSSTTEEEEECCGGGCCH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc------CccccccCCEEEEECChHhccc
Confidence 4589999999999999999986 5679999999999999999887664 4 5789999999864220
Q ss_pred c-cCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 136 N-YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 136 ~-~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
. ....+.+|.|++..+.++ +++.+.++|+|||++++....
T Consensus 155 ~~~~~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASASE--------------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHHHCCEEEEEECSBBSS--------------CCHHHHHHEEEEEEEEEEEEE
T ss_pred ccCccCCCcCEEEECCchHH--------------HHHHHHHhcCCCcEEEEEEcc
Confidence 0 023578999998766543 568899999999999998753
No 132
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.48 E-value=9.8e-14 Score=116.77 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccC-CC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYF-EK-- 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~-~~-- 140 (252)
...|||||||+|.++..+|+..| +..++|+|+++.+++.|++++... ++ .++.++.+|+.+.++... .+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------g~~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA------GVAEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH------TCGGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 34899999999999999999987 689999999999999999887665 45 469999999875443221 12
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+++|.|++..+.+. ...+++.+.++|+|||.|++.
T Consensus 147 ~~fD~V~~d~~~~~-----------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 147 PEFDLIFIDADKRN-----------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp CCEEEEEECSCGGG-----------HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcCEEEECCCHHH-----------HHHHHHHHHHHcCCCeEEEEe
Confidence 78999998654211 236999999999999999884
No 133
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.48 E-value=5.7e-14 Score=123.83 Aligned_cols=115 Identities=14% Similarity=0.151 Sum_probs=83.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|...+++||+++.+++.|++++.... .....+++.++.+|+.+.+.. .++++|.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~--~~~~~~rv~~~~~D~~~~l~~--~~~~fD~ 184 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMS--CGFSHPKLDLFCGDGFEFLKN--HKNEFDV 184 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTS--GGGGCTTEEEECSCHHHHHHH--CTTCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhc--cccCCCCEEEEEChHHHHHHh--cCCCceE
Confidence 348999999999999999998788899999999999999987653210 000136899999999765542 4678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+++.++|+... ..+....+++.+.++|+|||.+++.+.
T Consensus 185 Ii~d~~~~~~~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 185 IITDSSDPVGPA----ESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEECCC-----------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcc----hhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 999988876321 223346799999999999999999763
No 134
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.48 E-value=9.9e-14 Score=116.64 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=82.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC-Cccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK-GQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~-~s~d 144 (252)
...|||||||+|.++..+++..+ ..++|+|+++.+++.|++++... ++.|+.++.+|+.. . +++ ..+|
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~--~--~~~~~~fD 160 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA------GVKNVHVILGDGSK--G--FPPKAPYD 160 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGG--C--CGGGCCEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc------CCCCcEEEECCccc--C--CCCCCCcc
Confidence 45899999999999999999987 78999999999999999887653 67789999999732 2 333 3599
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE 191 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~ 191 (252)
.|++..+.++ +.+.+.++|+|||.+++.+.+..
T Consensus 161 ~Ii~~~~~~~--------------~~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 161 VIIVTAGAPK--------------IPEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp EEEECSBBSS--------------CCHHHHHTEEEEEEEEEEECSSS
T ss_pred EEEECCcHHH--------------HHHHHHHhcCCCcEEEEEEecCC
Confidence 9998765544 33578899999999999987643
No 135
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.48 E-value=3e-13 Score=116.60 Aligned_cols=106 Identities=14% Similarity=0.285 Sum_probs=80.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.. +..++|+|+|+.+++.|++++... ...+++.++.+|+.+ + + +++|.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~-~----~-~~fD~ 132 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANS-----ENLRSKRVLLAGWEQ-F----D-EPVDR 132 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTC-----CCCSCEEEEESCGGG-C----C-CCCSE
T ss_pred cCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhc-----CCCCCeEEEECChhh-C----C-CCeeE
Confidence 4589999999999999999766 459999999999999998876432 223589999999853 3 2 78999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|++...-.+.... ....+++++.++|||||.+++.+..
T Consensus 133 v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 133 IVSIGAFEHFGHE------RYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp EEEESCGGGTCTT------THHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEeCchhhcChH------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9986432221000 1136999999999999999997643
No 136
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.48 E-value=2e-13 Score=117.74 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=85.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccC-CCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYF-EKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~-~~~s~ 143 (252)
...|||||||+|.++..+++. +...++|+|+++.+++.|++++... +. .++.++++|+.. ++ + +++++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~~~f 134 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNM------KRRFKVFFRAQDSYG-RH--MDLGKEF 134 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTS------CCSSEEEEEESCTTT-SC--CCCSSCE
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhc------CCCccEEEEECCccc-cc--cCCCCCc
Confidence 458999999999999998887 4558999999999999998876432 33 579999999864 33 3 57899
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
|.|++.+.-.+.- .+. .....+++++.++|+|||.+++.+.+...
T Consensus 135 D~v~~~~~l~~~~-~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 179 (298)
T 1ri5_A 135 DVISSQFSFHYAF-STS---ESLDIAQRNIARHLRPGGYFIMTVPSRDV 179 (298)
T ss_dssp EEEEEESCGGGGG-SSH---HHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred CEEEECchhhhhc-CCH---HHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence 9999886532210 000 01236999999999999999999877543
No 137
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=1.5e-13 Score=116.07 Aligned_cols=105 Identities=11% Similarity=0.085 Sum_probs=82.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++... ...++|+|+++.+++.|++++. ...++.++++|+.. ++ ++++++|.
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~~d~~~-~~--~~~~~fD~ 161 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELA--------GMPVGKFILASMET-AT--LPPNTYDL 161 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTT--------TSSEEEEEESCGGG-CC--CCSSCEEE
T ss_pred CCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhc--------cCCceEEEEccHHH-CC--CCCCCeEE
Confidence 4589999999999999999986 4579999999999998887542 22689999999864 44 56789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|++...-.+.... ....+++++.++|||||.+++.+.
T Consensus 162 v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 162 IVIQWTAIYLTDA------DFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEec
Confidence 9987643332100 123699999999999999999874
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.47 E-value=1.4e-13 Score=121.23 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=83.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+..+ +..++|+|+++.+++.|++++... +++|+.++.+|+.+.+ ..++++|
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------g~~~v~~~~~d~~~~~---~~~~~fD 146 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL------GIENVIFVCGDGYYGV---PEFSPYD 146 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCC---GGGCCEE
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCeEEEECChhhcc---ccCCCeE
Confidence 45899999999999999999976 477999999999999999887653 7788999999987422 2357899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
.|++..+-++ +.+.+.++|||||++++.....
T Consensus 147 ~Iv~~~~~~~--------------~~~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 147 VIFVTVGVDE--------------VPETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp EEEECSBBSC--------------CCHHHHHHEEEEEEEEEEBCBG
T ss_pred EEEEcCCHHH--------------HHHHHHHhcCCCcEEEEEECCC
Confidence 9999876544 2257889999999999987553
No 139
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.47 E-value=1.4e-13 Score=112.92 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=80.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++.. ++..++|+|+|+.+++.|++++... + .++.++++|+.. ++ ++++++|.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------~-~~~~~~~~d~~~-~~--~~~~~fD~ 92 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSREN------N-FKLNISKGDIRK-LP--FKDESMSF 92 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHH------T-CCCCEEECCTTS-CC--SCTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhc------C-CceEEEECchhh-CC--CCCCceeE
Confidence 458999999999985555444 4679999999999999998877553 2 578999999863 43 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|++...-.+.. .-....+++++.++|+|||.+++.+-.
T Consensus 93 v~~~~~l~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 93 VYSYGTIFHMR------KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp EEECSCGGGSC------HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEcChHHhCC------HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 99864332210 001236999999999999999997643
No 140
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=2.6e-13 Score=113.07 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=82.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. +...++|+|+++.+++.|++++..... ...+..|+.++.+|+.. . ....+.+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~v~~~~~d~~~-~--~~~~~~fD 153 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDP-TLLSSGRVQLVVGDGRM-G--YAEEAPYD 153 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCT-HHHHTSSEEEEESCGGG-C--CGGGCCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc-cccCCCcEEEEECCccc-C--cccCCCcC
Confidence 4589999999999999999984 667999999999999999988765300 00014689999999863 2 23367899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.|++..+.+. +++.+.++|||||.+++.+..
T Consensus 154 ~i~~~~~~~~--------------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAAPV--------------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBBSS--------------CCHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchHH--------------HHHHHHHhcCCCcEEEEEEec
Confidence 9998765432 567899999999999998753
No 141
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.47 E-value=3.8e-13 Score=117.81 Aligned_cols=104 Identities=14% Similarity=0.279 Sum_probs=81.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. +..++|+|+|+.+++.|++++... ++ +++.++.+|+.+ + ++++|
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~-----~~~fD 157 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASI------DTNRSRQVLLQGWED-F-----AEPVD 157 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTS------CCSSCEEEEESCGGG-C-----CCCCS
T ss_pred cCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhc------CCCCceEEEECChHH-C-----CCCcC
Confidence 5589999999999999999986 569999999999999998876532 44 469999999863 3 27899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|++...-.+.... ....+++++.++|||||.+++.+.
T Consensus 158 ~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 158 RIVSIEAFEHFGHE------NYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEEEESCGGGTCGG------GHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEEeChHHhcCHH------HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99987432221100 123699999999999999999764
No 142
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.47 E-value=4.7e-13 Score=110.81 Aligned_cols=153 Identities=16% Similarity=0.090 Sum_probs=102.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. + ..++|+|+++.+++.|+++ . ..++.+|+.. +...++++++|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~-----------~--~~~~~~d~~~-~~~~~~~~~fD~ 96 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEK-----------L--DHVVLGDIET-MDMPYEEEQFDC 96 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTT-----------S--SEEEESCTTT-CCCCSCTTCEEE
T ss_pred CCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHh-----------C--CcEEEcchhh-cCCCCCCCccCE
Confidence 458999999999999999998 4 8999999999998876532 1 2678888863 223366789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccccccccccCccccCCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEADPVVKLLSS 225 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 225 (252)
|+++..-.+... ...+++++.++|+|||.+++.+.+..........+... +...... .. ++.......
T Consensus 97 v~~~~~l~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~-~~~~~~~~~ 164 (230)
T 3cc8_A 97 VIFGDVLEHLFD--------PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGN--WTYTEYG-LL-DKTHIRFFT 164 (230)
T ss_dssp EEEESCGGGSSC--------HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTC--CCCBSSS-TT-BTTCCCCCC
T ss_pred EEECChhhhcCC--------HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCC--ceeccCC-CC-CcceEEEec
Confidence 998653322211 12699999999999999999887655544444433222 2111110 10 111111244
Q ss_pred CCHHHHHHHHcCCCeEEEEEE
Q 025492 226 ATEEGQKVARNGGQTFQAVFR 246 (252)
Q Consensus 226 ~t~~e~~~~~~G~~i~~~~~~ 246 (252)
..++.....+.|.++-.+...
T Consensus 165 ~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 165 FNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEEec
Confidence 557788888899887666554
No 143
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=2.3e-13 Score=114.94 Aligned_cols=106 Identities=17% Similarity=0.319 Sum_probs=81.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++++... +. ++.++++|+.. ++ + ++++|.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~------~~-~v~~~~~d~~~-~~--~-~~~fD~ 108 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER------NL-KIEFLQGDVLE-IA--F-KNEFDA 108 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT------TC-CCEEEESCGGG-CC--C-CSCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc------CC-ceEEEECChhh-cc--c-CCCccE
Confidence 458999999999999999997 668999999999999998877542 33 79999999874 43 2 468999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|++.+........ -....+++.+.++|+|||.+++.+.+
T Consensus 109 v~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 109 VTMFFSTIMYFDE-----EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEECSSGGGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEcCCchhcCCH-----HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 9876543221100 01236999999999999999987644
No 144
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=4.3e-13 Score=107.53 Aligned_cols=116 Identities=13% Similarity=0.137 Sum_probs=85.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.. .++|+|+|+.|++. ..|+.++++|+.+ .++++++|.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------------~~~~~~~~~d~~~----~~~~~~fD~ 81 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------------HRGGNLVRADLLC----SINQESVDV 81 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------------CSSSCEEECSTTT----TBCGGGCSE
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------------ccCCeEEECChhh----hcccCCCCE
Confidence 4489999999999999999986 89999999998754 3468899999864 244589999
Q ss_pred EEEeCCCCcccccc-ccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKN-HRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h-~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|+++.|--|..... .........+++.+.+.| |||.+++.+........+.+.+.+.+
T Consensus 82 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~g 140 (170)
T 3q87_B 82 VVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERG 140 (170)
T ss_dssp EEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTT
T ss_pred EEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCC
Confidence 99986543322110 000001125888899999 99999998866666777777777665
No 145
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.46 E-value=2.1e-13 Score=123.39 Aligned_cols=110 Identities=16% Similarity=0.147 Sum_probs=80.4
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhh-cCCCCc--ccEEEEeCCcccccCccCCC-
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRV-SNPGQY--QNISVVRTNSMKYIPNYFEK- 140 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~-~~~~~~--~nv~~~~~da~~~l~~~~~~- 140 (252)
+...|||||||+|.+++.+|...+...++|||+++.+++.|++++...+. ....++ .+|.|+++|+.+ ++ +.+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~-lp--~~d~ 249 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS-EE--WRER 249 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS-HH--HHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC-Cc--cccc
Confidence 35699999999999999999987766799999999999999876543210 011233 689999999864 33 222
Q ss_pred -CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 -GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 -~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
..+|.|++|.+--++. ....|.++.++|||||+|++.
T Consensus 250 ~~~aDVVf~Nn~~F~pd---------l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 IANTSVIFVNNFAFGPE---------VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHTCSEEEECCTTCCHH---------HHHHHHHHHTTSCTTCEEEES
T ss_pred cCCccEEEEcccccCch---------HHHHHHHHHHcCCCCcEEEEe
Confidence 4689999875421211 124678899999999999873
No 146
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.45 E-value=6.8e-13 Score=109.24 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=77.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|++++ ++.++.+|+.. ++ .++++|.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~-~~---~~~~fD~ 105 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------------GRPVRTMLFHQ-LD---AIDAYDA 105 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------------TSCCEECCGGG-CC---CCSCEEE
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------------CCceEEeeecc-CC---CCCcEEE
Confidence 458999999999999999998 668999999999998887653 46778889863 44 5789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.+.... ....+++++.++|||||.+++.+
T Consensus 106 v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 106 VWAHACLLHVPRD------ELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp EEECSCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEecCchhhcCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 9987543332100 11369999999999999999975
No 147
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.45 E-value=1.6e-13 Score=119.03 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=77.8
Q ss_pred CceEEEEcCcccHHHH----HHHHHCCCCeE--EEEecCHhHHHHHHHHHHHHhhcCCCCcccEEE--EeCCcccccC--
Q 025492 66 KIQFADIGCGFGGLLI----SLSTLFPEVLM--IGMELRDKVTEYVKERILALRVSNPGQYQNISV--VRTNSMKYIP-- 135 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~----~lA~~~p~~~~--iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~--~~~da~~~l~-- 135 (252)
...|||||||+|.++. .++..+|...+ +|+|+|+.|++.|++++.. ..+++|+.+ ..+++.+ +.
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~-----~~~~~~v~~~~~~~~~~~-~~~~ 126 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK-----TSNLENVKFAWHKETSSE-YQSR 126 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHT-----CSSCTTEEEEEECSCHHH-HHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHh-----ccCCCcceEEEEecchhh-hhhh
Confidence 3489999999997654 44556677754 9999999999998876532 124566654 4566542 22
Q ss_pred --ccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 136 --NYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 136 --~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
..++++++|.|++.+.-.|.... ..+|++++++|||||.|++...
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDI--------PATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCH--------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred hccccCCCceeEEEEeeeeeecCCH--------HHHHHHHHHHcCCCcEEEEEEe
Confidence 11457899999987654443221 2599999999999999998753
No 148
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.45 E-value=8.4e-13 Score=111.47 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=77.2
Q ss_pred CCceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
++..|||+|||+|.++..+|+. .|...|+|+|+++.|++...+... ...|+.++.+|+..........+++
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~--------~r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ--------RRPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH--------HCTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh--------hcCCeEEEEcccccchhhhccccce
Confidence 3569999999999999999987 567899999999998754433222 1268999999986421111124689
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+++.+.|+.. ..++..+.++|||||.|++..
T Consensus 148 D~I~~d~a~~~~~----------~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQPDQT----------DIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCCTTHH----------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCChhHH----------HHHHHHHHHhCCCCeEEEEEE
Confidence 9999998776521 124455666999999999863
No 149
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.45 E-value=6.9e-13 Score=128.42 Aligned_cols=119 Identities=14% Similarity=0.122 Sum_probs=91.8
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..||+.. |...++|||+++.|++.|++++.........+.+|+.|+++|+.+ ++ +.++++|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d-Lp--~~d~sFD 798 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE-FD--SRLHDVD 798 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS-CC--TTSCSCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh-CC--cccCCee
Confidence 4589999999999999999997 567999999999999999887765422223467899999999874 44 5678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGD 194 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~ 194 (252)
.|++...-.+.... ....+++++.++|||| .+++.|.+.++..
T Consensus 799 lVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG-~LIISTPN~eyN~ 841 (950)
T 3htx_A 799 IGTCLEVIEHMEED------QACEFGEKVLSLFHPK-LLIVSTPNYEFNT 841 (950)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHHTTCCS-EEEEEECBGGGHH
T ss_pred EEEEeCchhhCChH------HHHHHHHHHHHHcCCC-EEEEEecCchhhh
Confidence 99986543332110 1124899999999999 8888888776543
No 150
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.45 E-value=8.5e-14 Score=121.07 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=83.6
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc---ccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY---QNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~---~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
..|||||||+|.++..+++. +..++|+|+|+.+++.|++++... +. .|+.++++|+.. ++ + ++++
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~------~~~~~~~v~~~~~d~~~-~~--~-~~~f 151 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEA------PADVRDRCTLVQGDMSA-FA--L-DKRF 151 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTS------CHHHHTTEEEEECBTTB-CC--C-SCCE
T ss_pred CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhc------ccccccceEEEeCchhc-CC--c-CCCc
Confidence 48999999999999999998 578999999999999998876432 32 689999999874 44 3 6899
Q ss_pred cEEEEeCC-CCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHH
Q 025492 144 TKMFFLFP-DPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELG 193 (252)
Q Consensus 144 d~i~~~fp-dP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~ 193 (252)
|.|++.+. -.+... -....+++++.++|+|||.|++.+.+.+..
T Consensus 152 D~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 152 GTVVISSGSINELDE------ADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp EEEEECHHHHTTSCH------HHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CEEEECCcccccCCH------HHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 98885321 111100 011369999999999999999998776554
No 151
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.45 E-value=3.1e-14 Score=119.78 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=79.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +..++|+|+|+.+++.|++++... ++ +|+.++++|+.. +. +++++|
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~-~~---~~~~~D 146 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVY------GIADKIEFICGDFLL-LA---SFLKAD 146 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT------TCGGGEEEEESCHHH-HG---GGCCCS
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc------CCCcCeEEEECChHH-hc---ccCCCC
Confidence 458999999999999999998 479999999999999999887654 55 689999999875 32 467999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|+++.|--+..... ..+.++.++|+|||.+++
T Consensus 147 ~v~~~~~~~~~~~~~--------~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 147 VVFLSPPWGGPDYAT--------AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp EEEECCCCSSGGGGG--------SSSBCTTTSCSSCHHHHH
T ss_pred EEEECCCcCCcchhh--------hHHHHHHhhcCCcceeHH
Confidence 999987655433211 144467888999998654
No 152
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=5.2e-13 Score=112.42 Aligned_cols=106 Identities=20% Similarity=0.246 Sum_probs=79.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc--cCCC-Cc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN--YFEK-GQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~--~~~~-~s 142 (252)
...|||||||+|.++..+|+..+ .++|+|+|+.+++.|++++ ...|+.++++|+.+ ++. .+++ ..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~---------~~~~~~~~~~d~~~-~~~~~~~~~~~~ 124 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKEN---------TAANISYRLLDGLV-PEQAAQIHSEIG 124 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHS---------CCTTEEEEECCTTC-HHHHHHHHHHHC
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhC---------cccCceEEECcccc-cccccccccccC
Confidence 45899999999999999999976 7999999999999887653 33489999999864 221 1111 23
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
+|.|+++..-.+.... ....+++++.++|||||.+++..-.
T Consensus 125 ~d~v~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVE------KRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SCEEEEESSSTTSCGG------GHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccEEEEcchhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8899887654443211 1136999999999999998876543
No 153
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.44 E-value=2.7e-13 Score=113.50 Aligned_cols=109 Identities=9% Similarity=0.100 Sum_probs=84.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|++++... +. ++.++++|+.. ++ ++ +++|.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~------~~-~~~~~~~d~~~-~~--~~-~~fD~ 104 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ------GL-KPRLACQDISN-LN--IN-RKFDL 104 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT------TC-CCEEECCCGGG-CC--CS-CCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc------CC-CeEEEeccccc-CC--cc-CCceE
Confidence 458999999999999999998 568999999999999998876542 33 79999999864 43 33 78999
Q ss_pred EEEeC-CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 146 MFFLF-PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 146 i~~~f-pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
|+++. .-.+..... ....+++++.++|+|||.+++.+.+...
T Consensus 105 v~~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (246)
T 1y8c_A 105 ITCCLDSTNYIIDSD-----DLKKYFKAVSNHLKEGGVFIFDINSYYK 147 (246)
T ss_dssp EEECTTGGGGCCSHH-----HHHHHHHHHHTTEEEEEEEEEEEECHHH
T ss_pred EEEcCccccccCCHH-----HHHHHHHHHHHhcCCCcEEEEEecCHHH
Confidence 99876 433321100 1236999999999999999998766543
No 154
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.44 E-value=6.6e-13 Score=116.21 Aligned_cols=119 Identities=16% Similarity=0.157 Sum_probs=87.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhc-CCCCcccEEEEeCCcccccC--ccCC--C
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVS-NPGQYQNISVVRTNSMKYIP--NYFE--K 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~-~~~~~~nv~~~~~da~~~l~--~~~~--~ 140 (252)
...|||||||+|.++..+++. +...++|+|+|+.|++.|+++....... ......++.++++|+.. ++ ..++ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSK-ELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTT-SCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccc-cchhhhcccCC
Confidence 458999999999999999985 5779999999999999998876543100 00134589999999874 32 1132 4
Q ss_pred CcccEEEEeCCCCcc-ccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH
Q 025492 141 GQLTKMFFLFPDPHF-KEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE 191 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~-k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~ 191 (252)
+++|.|++++.-.|. .... ....+++++.++|||||.+++.+.+.+
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~-----~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYE-----QADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHH-----HHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred CCEEEEEEecchhhccCCHH-----HHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 589999998866553 1100 013699999999999999999987654
No 155
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.44 E-value=4.7e-13 Score=120.91 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=91.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.++..+++. +..++|||+++.+++.|++++... +. ++.++.+|+.+.. .+++++|.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~------~~-~v~~~~~D~~~~~---~~~~~fD~ 301 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN------AL-KAQALHSDVDEAL---TEEARFDI 301 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT------TC-CCEEEECSTTTTS---CTTCCEEE
T ss_pred CCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc------CC-CeEEEEcchhhcc---ccCCCeEE
Confidence 458999999999999999998 569999999999999999887653 33 3899999986422 33579999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch-HHHHHHHHHHh
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE-ELGDWMRSCLE 201 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~-~~~~~~~~~~~ 201 (252)
|+++.|-.+..... .-....+++++.++|+|||.++++++.. .|...+.+.+.
T Consensus 302 Ii~npp~~~~~~~~---~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 302 IVTNPPFHVGGAVI---LDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp EEECCCCCTTCSSC---CHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred EEECCchhhccccc---HHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 99987654421100 0112469999999999999999988653 45555555553
No 156
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.44 E-value=4.1e-13 Score=112.44 Aligned_cols=108 Identities=17% Similarity=0.250 Sum_probs=82.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. ..++|+|+|+.+++.|++++... + .++.++.+|+.. ++ + ++++|.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~------~-~~~~~~~~d~~~-~~--~-~~~fD~ 99 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET------N-RHVDFWVQDMRE-LE--L-PEPVDA 99 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT------T-CCCEEEECCGGG-CC--C-SSCEEE
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc------C-CceEEEEcChhh-cC--C-CCCcCE
Confidence 358999999999999999987 68999999999999998876542 2 579999999864 43 3 378999
Q ss_pred EEEeC-CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 146 MFFLF-PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 146 i~~~f-pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
|++.+ .-.+.... -....+++++.++|+|||.+++.+.+...
T Consensus 100 v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 142 (243)
T 3d2l_A 100 ITILCDSLNYLQTE-----ADVKQTFDSAARLLTDGGKLLFDVHSPYK 142 (243)
T ss_dssp EEECTTGGGGCCSH-----HHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred EEEeCCchhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEEcCCHHH
Confidence 99865 22221100 01236899999999999999998876543
No 157
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=2.6e-13 Score=113.31 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=79.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++... ..++|+|+++.+++.|++++.. .+ |+.++.+|+...+ ..++++|.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~--~v~~~~~d~~~~~---~~~~~fD~ 137 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSY------YN--NIKLILGDGTLGY---EEEKPYDR 137 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTT------CS--SEEEEESCGGGCC---GGGCCEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhh------cC--CeEEEECCccccc---ccCCCccE
Confidence 4589999999999999999995 7899999999999999876632 23 8999999986422 23578999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
|++..+-++ +..++.++|+|||.+++.+...
T Consensus 138 v~~~~~~~~--------------~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPT--------------LLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSS--------------CCHHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHH--------------HHHHHHHHcCCCcEEEEEEcCC
Confidence 998765443 3357899999999999988654
No 158
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=2.8e-13 Score=115.62 Aligned_cols=97 Identities=15% Similarity=0.234 Sum_probs=76.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++ ++..++|+|+|+.+++.|+. ..|+.++.+|+.. ++ ++++++|.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~------------~~~~~~~~~d~~~-~~--~~~~~fD~ 97 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVV------------HPQVEWFTGYAEN-LA--LPDKSVDG 97 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCC------------CTTEEEECCCTTS-CC--SCTTCBSE
T ss_pred CCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHh------------ccCCEEEECchhh-CC--CCCCCEeE
Confidence 45899999999999999998 57899999999998765432 2289999999863 54 66889999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|++...-.+... ...+++++.++|| ||.+++.+-
T Consensus 98 v~~~~~l~~~~~--------~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 98 VISILAIHHFSH--------LEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp EEEESCGGGCSS--------HHHHHHHHHHHBC-SSCEEEEEE
T ss_pred EEEcchHhhccC--------HHHHHHHHHHHhC-CcEEEEEEc
Confidence 998765333211 1369999999999 997777664
No 159
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.44 E-value=1.1e-12 Score=120.88 Aligned_cols=138 Identities=19% Similarity=0.235 Sum_probs=98.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
+..|||+|||+|..+..+|...++ ..++|+|+++.+++.+++++... +++|+.++++|+.. ++..++++.+|
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~------g~~~v~~~~~D~~~-~~~~~~~~~fD 332 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM------GIKIVKPLVKDARK-APEIIGEEVAD 332 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCTTC-CSSSSCSSCEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc------CCCcEEEEEcChhh-cchhhccCCCC
Confidence 458999999999999999999876 79999999999999999887664 77899999999874 43335557899
Q ss_pred EEEEeCCCCcccc--cc--ccc-----c-----ccCHHHHHHHHHhhcCCcEEEEEeCc---hHHHHHHHHHHhcCCCcc
Q 025492 145 KMFFLFPDPHFKE--KN--HRR-----R-----VISPHLLDEYAYVLGVGGIIYTITDV---EELGDWMRSCLENHPMFE 207 (252)
Q Consensus 145 ~i~~~fpdP~~k~--~h--~kr-----r-----~~~~~~l~~~~~~LkpgG~l~~~td~---~~~~~~~~~~~~~~~~~~ 207 (252)
.|+++.|.--... ++ .+. . -.+..+++.+.++|||||.+++.|-. .+.-+.+...+..++.|+
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 9999766421110 00 000 0 01257899999999999999987632 222223334455666665
Q ss_pred ccc
Q 025492 208 ALT 210 (252)
Q Consensus 208 ~~~ 210 (252)
.++
T Consensus 413 ~~~ 415 (450)
T 2yxl_A 413 LVP 415 (450)
T ss_dssp ECC
T ss_pred Eee
Confidence 543
No 160
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=1.9e-13 Score=114.30 Aligned_cols=100 Identities=15% Similarity=0.212 Sum_probs=81.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCC------CCeEEEEecCHhHHHHHHHHHHHHhhcCCCC-----cccEEEEeCCccccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP------EVLMIGMELRDKVTEYVKERILALRVSNPGQ-----YQNISVVRTNSMKYI 134 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p------~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~-----~~nv~~~~~da~~~l 134 (252)
...|||||||+|.++..+++..+ ...++|+|+++.+++.|++++... + ..|+.++.+|+...
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~v~~~~~d~~~~- 157 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD------DRSMLDSGQLLIVEGDGRKG- 157 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH------HHHHHHHTSEEEEESCGGGC-
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc------CccccCCCceEEEECCcccC-
Confidence 45899999999999999999754 268999999999999999887653 3 56899999998642
Q ss_pred CccCCC-CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 135 PNYFEK-GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 135 ~~~~~~-~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
+++ +.+|.|++..+.++ +++.+.++|||||++++.+..
T Consensus 158 ---~~~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 158 ---YPPNAPYNAIHVGAAAPD--------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ---CGGGCSEEEEEECSCBSS--------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ---CCcCCCccEEEECCchHH--------------HHHHHHHHhcCCCEEEEEEec
Confidence 333 78999998876544 457899999999999998753
No 161
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.44 E-value=2.6e-13 Score=107.91 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=77.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++... .++|+|+++.+++.|+++ .+|+.++.+| . + ++++++|.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----------~~~v~~~~~d-~---~--~~~~~~D~ 78 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-----------FDSVITLSDP-K---E--IPDNSVDF 78 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----------CTTSEEESSG-G---G--SCTTCEEE
T ss_pred CCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----------CCCcEEEeCC-C---C--CCCCceEE
Confidence 45899999999999999999963 899999999999887654 3579999998 2 2 55789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+++..-.+... ...+++++.++|+|||.+++..
T Consensus 79 v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 79 ILFANSFHDMDD--------KQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EEEESCSTTCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEccchhcccC--------HHHHHHHHHHhcCCCCEEEEEE
Confidence 998765544321 1369999999999999999974
No 162
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.44 E-value=2.9e-13 Score=111.37 Aligned_cols=98 Identities=18% Similarity=0.224 Sum_probs=78.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+ +. .++|+|+++.+++.|+++. +++.++++|+.. ++ ++++++|
T Consensus 37 ~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~-~~--~~~~~fD 97 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEA-LP--FPGESFD 97 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTS-CC--SCSSCEE
T ss_pred CCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEccccc-CC--CCCCcEE
Confidence 458999999999998887 44 8999999999998876532 578999999863 44 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
.|+++..-.+... ...+++++.++|||||.+++.+.+.
T Consensus 98 ~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 98 VVLLFTTLEFVED--------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEEESCTTTCSC--------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEcChhhhcCC--------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9998765444321 1369999999999999999987554
No 163
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=2.7e-13 Score=114.97 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=81.1
Q ss_pred CceEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc---------------------
Q 025492 66 KIQFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN--------------------- 122 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n--------------------- 122 (252)
...|||+|||+|.+++.++.. .+..+++|+|+|+.+++.|+.++..... .++.+
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSP---AGLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSH---HHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhh---ccccccchhhhhhhhhcccccchhhh
Confidence 458999999999999999998 7778999999999999999877643100 01211
Q ss_pred -----EE-------------EEeCCcccccCcc-C-CCCcccEEEEeCCCCcccccccc---ccccCHHHHHHHHHhhcC
Q 025492 123 -----IS-------------VVRTNSMKYIPNY-F-EKGQLTKMFFLFPDPHFKEKNHR---RRVISPHLLDEYAYVLGV 179 (252)
Q Consensus 123 -----v~-------------~~~~da~~~l~~~-~-~~~s~d~i~~~fpdP~~k~~h~k---rr~~~~~~l~~~~~~Lkp 179 (252)
+. ++++|+...+... + ....+|.|+++.| +....+.. ..-....+++++.++|+|
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp--~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLP--YGERTHWEGQVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECC--GGGSSSSSSCCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCC--eeccccccccccccHHHHHHHHHHHhcCC
Confidence 56 9999976422100 0 3348999999854 21111100 011224699999999999
Q ss_pred CcEEEEEeC
Q 025492 180 GGIIYTITD 188 (252)
Q Consensus 180 gG~l~~~td 188 (252)
||.+++...
T Consensus 207 gG~l~~~~~ 215 (250)
T 1o9g_A 207 HAVIAVTDR 215 (250)
T ss_dssp TCEEEEEES
T ss_pred CcEEEEeCc
Confidence 999999543
No 164
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.43 E-value=3.1e-13 Score=107.01 Aligned_cols=120 Identities=12% Similarity=0.024 Sum_probs=86.2
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc-----cCccCC
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY-----IPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~-----l~~~~~ 139 (252)
...|||+|||+|.++..+++. .|+..++|+|+++ ++ ...++.++.+|+... ++..++
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~----------------~~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD----------------PIVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC----------------CCTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc----------------ccCcEEEEEcccccchhhhhhhccCC
Confidence 458999999999999999999 4778999999998 53 236799999998642 111155
Q ss_pred CCcccEEEEeCCCCcccccccc---ccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhc
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHR---RRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLEN 202 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~k---rr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 202 (252)
++++|.|+++.+..|....... ..-....+++++.++|+|||.+++.+........+.+.+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS 151 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH
Confidence 6899999998776554321100 00011469999999999999999987655555555555554
No 165
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.43 E-value=1.1e-12 Score=118.20 Aligned_cols=119 Identities=18% Similarity=0.069 Sum_probs=86.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.+++.+|...+...++|+|+++.|++.|+.++... ++ +++.++++|+.+ ++ ++++++|
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~------gl~~~i~~~~~D~~~-~~--~~~~~fD 288 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA------GVLDKIKFIQGDATQ-LS--QYVDSVD 288 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT------TCGGGCEEEECCGGG-GG--GTCSCEE
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc------CCCCceEEEECChhh-CC--cccCCcC
Confidence 45899999999999999999977668999999999999999988664 55 689999999974 44 4467899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDW 195 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 195 (252)
.|++|.|-...-.....-.-+...+++++.++| ||.+++.+.+.+.+..
T Consensus 289 ~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~ 337 (373)
T 3tm4_A 289 FAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEE 337 (373)
T ss_dssp EEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHH
T ss_pred EEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHH
Confidence 999987632110000001112357889999999 5655555655544443
No 166
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=6.6e-13 Score=113.59 Aligned_cols=107 Identities=13% Similarity=0.133 Sum_probs=80.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHh------HHHHHHHHHHHHhhcCCCCc-ccEEEEeCC-cccccCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDK------VTEYVKERILALRVSNPGQY-QNISVVRTN-SMKYIPN 136 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~------~i~~a~~~~~~~~~~~~~~~-~nv~~~~~d-a~~~l~~ 136 (252)
...|||||||+|.++..+++.. |...++|+|+|+. +++.|++++... ++ +|+.++.+| ... ...
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~-~~~ 116 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG------PLGDRLTVHFNTNLSD-DLG 116 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS------TTGGGEEEECSCCTTT-CCG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc------CCCCceEEEECChhhh-ccC
Confidence 4589999999999999999995 7789999999997 899988876432 44 689999998 321 112
Q ss_pred cCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 137 YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 137 ~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.++++++|.|+++..-.+... ...+++.+.++++|||.+++.+
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~--------~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFAS--------ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSC--------HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCCCEEEEEEccchhhCCC--------HHHHHHHHHHHhCCCCEEEEEE
Confidence 256789999998754322211 1247777777777899999975
No 167
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=5.1e-13 Score=107.64 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=85.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|+++ .+++.++.+|+.. ++ ++++++|.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~-----------~~~~~~~~~d~~~-~~--~~~~~~D~ 110 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQD-----------FPEARWVVGDLSV-DQ--ISETDFDL 110 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHH-----------CTTSEEEECCTTT-SC--CCCCCEEE
T ss_pred CCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHh-----------CCCCcEEEccccc-CC--CCCCceeE
Confidence 458999999999999999998 56899999999999887753 2468999999864 33 55788999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH--HHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE--LGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~--~~~~~~~~~~~~~ 204 (252)
|+++.+.-+.... -....+++.+.++|+|||.+++.+.... -...+.+.+...+
T Consensus 111 i~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 111 IVSAGNVMGFLAE-----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVG 166 (195)
T ss_dssp EEECCCCGGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHT
T ss_pred EEECCcHHhhcCh-----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcC
Confidence 9986432211100 0114699999999999999999765432 2344455555443
No 168
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.42 E-value=6.1e-13 Score=109.91 Aligned_cols=153 Identities=13% Similarity=0.023 Sum_probs=97.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc-CCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY-FEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~-~~~~s~d 144 (252)
...|||||||+|.++..+++. +..++|+|+++.+++.|+++ .++.++.+|+....... .+..++|
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------------cccccchhhHHhhcccccccCCCcc
Confidence 358999999999999999998 66899999999999877642 46778888886432212 2345599
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCccccccccccc--CccccC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEALTKEELEA--DPVVKL 222 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~ 222 (252)
.|+++..-.+. ....+++++.++|+|||.+++.+.+....... .+ ...+.......... .+....
T Consensus 119 ~v~~~~~l~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (227)
T 3e8s_A 119 LICANFALLHQ---------DIIELLSAMRTLLVPGGALVIQTLHPWSVADG--DY--QDGWREESFAGFAGDWQPMPWY 185 (227)
T ss_dssp EEEEESCCCSS---------CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT--CC--SCEEEEECCTTSSSCCCCEEEE
T ss_pred EEEECchhhhh---------hHHHHHHHHHHHhCCCeEEEEEecCccccCcc--cc--ccccchhhhhccccCcccceEE
Confidence 99987643311 12369999999999999999988654221000 00 00010000000000 011111
Q ss_pred CCCCCHHHHHHHHcCCCeEEEEE
Q 025492 223 LSSATEEGQKVARNGGQTFQAVF 245 (252)
Q Consensus 223 ~~~~t~~e~~~~~~G~~i~~~~~ 245 (252)
..+..++.....+.|..+-.+.-
T Consensus 186 ~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 186 FRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp ECCHHHHHHHHHHTTEEEEEEEC
T ss_pred EecHHHHHHHHHHcCCeEEEEec
Confidence 23556788888899988766543
No 169
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.42 E-value=4.6e-12 Score=103.90 Aligned_cols=117 Identities=14% Similarity=0.079 Sum_probs=88.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.++..+++.. ...++|+|+++.+++.|++++... ++ ++.++++|+.. ++ +++|.
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~-~~-----~~~D~ 115 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF------KG-KFKVFIGDVSE-FN-----SRVDI 115 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG------TT-SEEEEESCGGG-CC-----CCCSE
T ss_pred cCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc------CC-CEEEEECchHH-cC-----CCCCE
Confidence 4589999999999999999884 347999999999999998876432 44 89999999874 32 48999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|+++.|--+. ++-....+++.+.++| ||.+.+.++.....+.+.+.+...+
T Consensus 116 v~~~~p~~~~------~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g 166 (207)
T 1wy7_A 116 VIMNPPFGSQ------RKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHG 166 (207)
T ss_dssp EEECCCCSSS------STTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTT
T ss_pred EEEcCCCccc------cCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCC
Confidence 9998774332 1223457899999998 6666555556666777777776665
No 170
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.42 E-value=8.5e-13 Score=117.80 Aligned_cols=104 Identities=13% Similarity=0.224 Sum_probs=79.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +...++|||+| ++++.|++++... ++.+ +.++++|+.+ ++ ++++++|
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~~fD 135 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKAN------KLDHVVTIIKGKVEE-VE--LPVEKVD 135 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHT------TCTTTEEEEESCTTT-CC--CSSSCEE
T ss_pred CCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHc------CCCCcEEEEECcHHH-cc--CCCCceE
Confidence 458999999999999999998 56699999999 5999998877653 5544 9999999874 43 6678999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|+.+........ .-....++..+.++|||||.+++
T Consensus 136 ~Iis~~~~~~l~~-----~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 136 IIISEWMGYCLFY-----ESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEEECCCBBTBTB-----TCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEccccccccC-----chhHHHHHHHHHHhCCCCCEEcc
Confidence 9998643221100 01124689999999999999853
No 171
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=5.7e-13 Score=120.30 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=86.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC-CCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF-EKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~-~~~s~d 144 (252)
...|||+|||+|.+++.+|.. ...++|+|+++.+++.|++++... +++|+.++++|+.+.+.... ...++|
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n------~~~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN------GLGNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT------TCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc------CCCCceEEECCHHHHHHHHHhcCCCee
Confidence 458999999999999999998 678999999999999999988653 77889999999976443211 146899
Q ss_pred EEEEeCCCCccccccc--cccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 145 KMFFLFPDPHFKEKNH--RRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~--krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.|+++.|- +.+.... ...-....++..+.++|+|||.+++.+..
T Consensus 282 ~Ii~dpP~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPA-FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCC-SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCC-CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99987553 1111000 00011346899999999999999998865
No 172
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.41 E-value=1.2e-12 Score=119.93 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=97.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|..+..+|+..++..++|+|+++.+++.+++++... +. ++.++++|+.. ++..++++.+|.
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~------g~-~~~~~~~D~~~-~~~~~~~~~fD~ 318 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL------GM-KATVKQGDGRY-PSQWCGEQQFDR 318 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT------TC-CCEEEECCTTC-THHHHTTCCEEE
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc------CC-CeEEEeCchhh-chhhcccCCCCE
Confidence 56899999999999999999988889999999999999999887654 44 47899999864 332345678999
Q ss_pred EEEeCCCCccccc--cc--ccc----------ccCHHHHHHHHHhhcCCcEEEEEeC---chHHHHHHHHHHhcCCCccc
Q 025492 146 MFFLFPDPHFKEK--NH--RRR----------VISPHLLDEYAYVLGVGGIIYTITD---VEELGDWMRSCLENHPMFEA 208 (252)
Q Consensus 146 i~~~fpdP~~k~~--h~--krr----------~~~~~~l~~~~~~LkpgG~l~~~td---~~~~~~~~~~~~~~~~~~~~ 208 (252)
|+++.|..-...- +. +.+ -.+..+++.+.++|||||++++.|- ..+....+...+..++.|+.
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEE
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEE
Confidence 9998764321100 00 000 1235789999999999999999872 22223334445566766665
Q ss_pred cc
Q 025492 209 LT 210 (252)
Q Consensus 209 ~~ 210 (252)
++
T Consensus 399 ~~ 400 (429)
T 1sqg_A 399 CE 400 (429)
T ss_dssp CS
T ss_pred eC
Confidence 53
No 173
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.41 E-value=3.6e-13 Score=113.84 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=76.4
Q ss_pred CceEEEEcCcccHHHHHHHHH----CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC
Q 025492 66 KIQFADIGCGFGGLLISLSTL----FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~----~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~ 139 (252)
...|||||||+|.++..+|+. .|+..++|||+++.+++.|+. ..+||.++++|+.+. ++ .+.
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-----------~~~~v~~~~gD~~~~~~l~-~~~ 149 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-----------DMENITLHQGDCSDLTTFE-HLR 149 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-----------GCTTEEEEECCSSCSGGGG-GGS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-----------cCCceEEEECcchhHHHHH-hhc
Confidence 348999999999999999998 788999999999998876541 126899999998742 22 233
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHH-hhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAY-VLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~-~LkpgG~l~~~ 186 (252)
..++|.|++.... . ....++.++.+ +|||||.|++.
T Consensus 150 ~~~fD~I~~d~~~-------~----~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 150 EMAHPLIFIDNAH-------A----NTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp SSCSSEEEEESSC-------S----SHHHHHHHHHHHTCCTTCEEEEC
T ss_pred cCCCCEEEECCch-------H----hHHHHHHHHHHhhCCCCCEEEEE
Confidence 4479999986541 1 12468999997 99999999984
No 174
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.40 E-value=1.1e-12 Score=110.08 Aligned_cols=117 Identities=17% Similarity=0.082 Sum_probs=90.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCC-cc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKG-QL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~-s~ 143 (252)
+..|||||||+|.+++.+|+..|...++|+|+++.+++.|++++... ++. +|.+..+|+.+.++ ++ .+
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~------gl~~~i~~~~~d~l~~l~----~~~~~ 85 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH------GLKEKIQVRLANGLAAFE----ETDQV 85 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT------TCTTTEEEEECSGGGGCC----GGGCC
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEEECchhhhcc----cCcCC
Confidence 46899999999999999999998889999999999999999998764 665 59999999864333 33 69
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.--. .. +-..++......|+++|.|+++... -...+.+.+.+++
T Consensus 86 D~IviaG~G---------g~-~i~~Il~~~~~~L~~~~~lVlq~~~--~~~~vr~~L~~~G 134 (225)
T 3kr9_A 86 SVITIAGMG---------GR-LIARILEEGLGKLANVERLILQPNN--REDDLRIWLQDHG 134 (225)
T ss_dssp CEEEEEEEC---------HH-HHHHHHHHTGGGCTTCCEEEEEESS--CHHHHHHHHHHTT
T ss_pred CEEEEcCCC---------hH-HHHHHHHHHHHHhCCCCEEEEECCC--CHHHHHHHHHHCC
Confidence 988863110 00 1235888999999999999997753 3445556666664
No 175
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.40 E-value=5.1e-13 Score=118.84 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=89.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..|...++|+|+|+.+++.|++++... +. ++.++.+|+.. +.++++|.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~------~~-~~~~~~~d~~~-----~~~~~fD~ 264 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN------GV-EGEVFASNVFS-----EVKGRFDM 264 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT------TC-CCEEEECSTTT-----TCCSCEEE
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh------CC-CCEEEEccccc-----cccCCeeE
Confidence 34899999999999999999999889999999999999999887553 33 36778888753 22678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc-hHHHHHHHHHH
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV-EELGDWMRSCL 200 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~-~~~~~~~~~~~ 200 (252)
|+++.|-.+....+. -....+++++.++|+|||.+++.+.. ..|...+...+
T Consensus 265 Iv~~~~~~~g~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f 317 (343)
T 2pjd_A 265 IISNPPFHDGMQTSL---DAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETF 317 (343)
T ss_dssp EEECCCCCSSSHHHH---HHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHH
T ss_pred EEECCCcccCccCCH---HHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhc
Confidence 999876543111010 11246999999999999999998754 33444444444
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.40 E-value=4.8e-13 Score=109.24 Aligned_cols=119 Identities=11% Similarity=0.119 Sum_probs=82.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCC--CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC--------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP--EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP-------- 135 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p--~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~-------- 135 (252)
...|||||||+|.++..++++.| ...++|+|+++.+ ..+++.++++|+.. +.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------------~~~~v~~~~~d~~~-~~~~~~~~~~ 84 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------------PIPNVYFIQGEIGK-DNMNNIKNIN 84 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------------CCTTCEEEECCTTT-TSSCCC----
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------------CCCCceEEEccccc-hhhhhhcccc
Confidence 45899999999999999999987 6899999999831 24579999999864 22
Q ss_pred ---------------ccCCCCcccEEEEeCCCCcccc---ccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHH
Q 025492 136 ---------------NYFEKGQLTKMFFLFPDPHFKE---KNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMR 197 (252)
Q Consensus 136 ---------------~~~~~~s~d~i~~~fpdP~~k~---~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~ 197 (252)
..+++.++|.|+.+++-+|... .+....-....+++++.++|||||.|++.+-..+....+.
T Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~ 164 (201)
T 2plw_A 85 YIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLK 164 (201)
T ss_dssp -------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHH
T ss_pred ccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHH
Confidence 0145678999998876555211 1111001123478999999999999998664333333444
Q ss_pred HHHhc
Q 025492 198 SCLEN 202 (252)
Q Consensus 198 ~~~~~ 202 (252)
..+..
T Consensus 165 ~~l~~ 169 (201)
T 2plw_A 165 TYLKG 169 (201)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 45543
No 177
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=1.6e-12 Score=112.35 Aligned_cols=109 Identities=12% Similarity=0.172 Sum_probs=82.2
Q ss_pred ceEEEEcCcc---cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccccc---C-----
Q 025492 67 IQFADIGCGF---GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYI---P----- 135 (252)
Q Consensus 67 ~~vLDIGcG~---G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l---~----- 135 (252)
..|||||||+ |.++..+++..|+..++|+|+|+.|++.|++++. ..+++.++.+|+.+.- .
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--------~~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--------KDPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--------TCTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--------CCCCeEEEEeeCCCchhhhccchhh
Confidence 5899999999 9988888888899999999999999999987652 2468999999986310 0
Q ss_pred ccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 136 NYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 136 ~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
..++..++|.|+++..-.|.... ....+|++++++|+|||.|++..-.
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~------~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD------VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT------THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred ccCCCCCCEEEEEechhhhCCcH------HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 12444588999876533332110 0136999999999999999987643
No 178
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.40 E-value=4e-13 Score=121.56 Aligned_cols=118 Identities=10% Similarity=0.030 Sum_probs=85.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc--cEEEEeCCcccccCccC-CCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ--NISVVRTNSMKYIPNYF-EKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~--nv~~~~~da~~~l~~~~-~~~s 142 (252)
...|||+|||+|.+++.+|... ...++|||+|+.+++.|++++... ++. |+.++++|+.+.++... ....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n------~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEAN------HLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHT------TCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECCHHHHHHHHHHhCCC
Confidence 4589999999999999999863 348999999999999999988653 665 89999999976554221 1358
Q ss_pred ccEEEEeCCCCcccccc-ccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 143 LTKMFFLFPDPHFKEKN-HRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h-~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
+|.|+++.|---..+.. ..-.-....++..+.++|+|||.|++.+...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99999876531100001 0000012347788899999999999998754
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=8.8e-13 Score=120.71 Aligned_cols=105 Identities=17% Similarity=0.143 Sum_probs=78.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHH-------HHHHHHHhhcCCCC--cccEEEEeCCcccccCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYV-------KERILALRVSNPGQ--YQNISVVRTNSMKYIPN 136 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a-------~~~~~~~~~~~~~~--~~nv~~~~~da~~~l~~ 136 (252)
...|||||||+|.+++.+|+..+...++|||+++.+++.| +.++.. .+ ..|+.++++|.... ..
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~------~Gl~~~nV~~i~gD~~~~-~~ 315 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKL------YGMRLNNVEFSLKKSFVD-NN 315 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH------TTBCCCCEEEEESSCSTT-CH
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH------cCCCCCceEEEEcCcccc-cc
Confidence 5589999999999999999987777899999999999988 555543 25 57999999875421 10
Q ss_pred cC--CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 137 YF--EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 137 ~~--~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.+ ..+++|.|+++..- +... ....|+++.++|||||.|++.
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~~d--------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FDED--------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CCHH--------HHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccCCCCEEEEeCcc-cccc--------HHHHHHHHHHhCCCCeEEEEe
Confidence 11 24689999986322 1110 124789999999999999885
No 180
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.40 E-value=1.2e-12 Score=117.21 Aligned_cols=106 Identities=15% Similarity=0.116 Sum_probs=81.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++|+|+ +.+++.|++++.. .++ ++|.++.+|+.. ....++ +++|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~~~~~p-~~~D 250 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG------LSGSERIHGHGANLLD-RDVPFP-TGFD 250 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT------CTTGGGEEEEECCCCS-SSCCCC-CCCS
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh------cCcccceEEEEccccc-cCCCCC-CCcC
Confidence 45899999999999999999999999999999 9999998876633 243 689999999863 110133 7899
Q ss_pred EEEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-. |.... ...+|+++.++|+|||+|++..
T Consensus 251 ~v~~~~vlh~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEE-------VISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEEEESCSTTSCHHH-------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEEechhhhCCHHH-------HHHHHHHHHHhcCCCcEEEEEe
Confidence 999865322 22110 1258999999999999998864
No 181
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.40 E-value=1.1e-12 Score=118.98 Aligned_cols=118 Identities=11% Similarity=0.057 Sum_probs=87.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-c-cEEEEeCCcccccCccC-CCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-Q-NISVVRTNSMKYIPNYF-EKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~-nv~~~~~da~~~l~~~~-~~~s 142 (252)
...|||+|||+|.+++.+|... ...++|+|+++.+++.|++++... ++ + |+.++++|+.+.+.... ....
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n------gl~~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN------KLDLSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT------TCCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred CCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECCHHHHHHHHHhcCCC
Confidence 4589999999999999999974 458999999999999999988653 66 5 89999999976443211 1358
Q ss_pred ccEEEEeCCCCccccccc-cccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 143 LTKMFFLFPDPHFKEKNH-RRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~-krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
+|.|+++.|--...+.+. ...-....++..+.+.|+|||.+++.+...
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999999765311111110 000123468899999999999999988753
No 182
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.40 E-value=1.3e-12 Score=111.34 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=78.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|+++. . .+ ++.+|+.. ++ ++++++|.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~---------~-~~--~~~~d~~~-~~--~~~~~fD~ 117 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKG---------V-KN--VVEAKAED-LP--FPSGAFEA 117 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHT---------C-SC--EEECCTTS-CC--SCTTCEEE
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhc---------C-CC--EEECcHHH-CC--CCCCCEEE
Confidence 458999999999999999998 568999999999999887642 1 23 78888863 44 66789999
Q ss_pred EEEeCCC-CccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH
Q 025492 146 MFFLFPD-PHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE 191 (252)
Q Consensus 146 i~~~fpd-P~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~ 191 (252)
|++...- .+... ...+++++.++|||||.+++.+.+..
T Consensus 118 v~~~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 118 VLALGDVLSYVEN--------KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp EEECSSHHHHCSC--------HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EEEcchhhhcccc--------HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 9875421 11010 13699999999999999999887754
No 183
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.39 E-value=4.7e-13 Score=113.99 Aligned_cols=100 Identities=16% Similarity=0.257 Sum_probs=77.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.. ..++|+|+|+.+++.|++++ .++.++.+|+.. ++ + ++++|.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~-~~--~-~~~fD~ 113 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRN-----------PDAVLHHGDMRD-FS--L-GRRFSA 113 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTT-CC--C-SCCEEE
T ss_pred CCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhC-----------CCCEEEECChHH-CC--c-cCCcCE
Confidence 3589999999999999999984 58999999999998887642 379999999864 43 2 689999
Q ss_pred EEEeC-CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLF-PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~f-pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++.+ .-.+..... ....+++++.++|||||.|++.+
T Consensus 114 v~~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQA-----ELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEECTTGGGGSCHHH-----HHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEcCchhhhcCCHH-----HHHHHHHHHHHhcCCCcEEEEEe
Confidence 99876 433321100 11358999999999999999953
No 184
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.39 E-value=1.7e-12 Score=114.60 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=81.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++++|+ +.+++.|++++... ++ ++|.++.+|+.+ .++. .+|
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~----~~p~-~~D 237 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT------GLSGRAQVVVGSFFD----PLPA-GAG 237 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------TCTTTEEEEECCTTS----CCCC-SCS
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc------CcCcCeEEecCCCCC----CCCC-CCc
Confidence 35899999999999999999999999999999 99999998877553 43 689999999752 2333 799
Q ss_pred EEEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|++...-. |+.. ....++++++++|+|||+|++...
T Consensus 238 ~v~~~~vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 238 GYVLSAVLHDWDDL-------SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEEEESCGGGSCHH-------HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEEehhhccCCHH-------HHHHHHHHHHHhcCCCCEEEEEee
Confidence 999754321 1110 013699999999999999998653
No 185
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=1.5e-12 Score=115.74 Aligned_cols=108 Identities=15% Similarity=0.163 Sum_probs=85.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
+..|||+|||+|.+++. |+ ....++|+|+++.+++.|++++... ++ +|+.++++|+.+.+ +.+|
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n------~l~~~v~~~~~D~~~~~------~~fD 260 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN------KLEHKIIPILSDVREVD------VKGN 260 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT------TCTTTEEEEESCGGGCC------CCEE
T ss_pred CCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEECChHHhc------CCCc
Confidence 56899999999999999 87 4779999999999999999988664 55 58999999987532 6899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHh
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLE 201 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 201 (252)
.|+++.|.-. ..++..+.++|+|||.+++.+.... .....+.+.
T Consensus 261 ~Vi~dpP~~~------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~ 304 (336)
T 2yx1_A 261 RVIMNLPKFA------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFE 304 (336)
T ss_dssp EEEECCTTTG------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHH
T ss_pred EEEECCcHhH------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHH
Confidence 9998654211 1599999999999999998765544 444444444
No 186
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.39 E-value=4.5e-13 Score=109.29 Aligned_cols=100 Identities=15% Similarity=0.226 Sum_probs=77.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.+++.++...|+..|+|+|+|+.|++.|++++... +.. |+++ +|.... .+++.+|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~------g~~~~v~~--~d~~~~----~~~~~~D 117 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL------KTTIKYRF--LNKESD----VYKGTYD 117 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS------CCSSEEEE--ECCHHH----HTTSEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc------CCCccEEE--eccccc----CCCCCcC
Confidence 34899999999999999999999999999999999999999988664 666 7877 554421 4578899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|.++---|....+ ...+..+.+.|+|||.|+-
T Consensus 118 vVLa~k~LHlL~~~--------~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQ--------DVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EEEEETCHHHHHHT--------TCCHHHHHHTCEEEEEEEE
T ss_pred hhhHhhHHHhhhhh--------HHHHHHHHHHhCCCCEEEE
Confidence 99986433332111 1245589999999998764
No 187
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.38 E-value=9.7e-13 Score=116.77 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=82.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc--EEEEeCCcccccCccC-CCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN--ISVVRTNSMKYIPNYF-EKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n--v~~~~~da~~~l~~~~-~~~s 142 (252)
...|||+|||+|.+++.+|... ..++|||+|+.+++.|++++... ++.+ +.++++|+.+.+.... ....
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~------gl~~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLA------GLEQAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHH------TCTTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECcHHHHHHHHHhcCCC
Confidence 3589999999999999999974 48999999999999999988765 5554 9999999976443111 1468
Q ss_pred ccEEEEeCCCCccc-ccc-ccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFK-EKN-HRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k-~~h-~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+++.|---.. +.. ....-....+++.+.++|+|||.|++.+
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 99999976521100 000 0000012468999999999999977755
No 188
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.38 E-value=1.8e-12 Score=119.71 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=86.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|..+..+|+..++ ..++|+|+++.+++.+++++... ++. +.++++|+.. +... .++++|
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~------G~~-v~~~~~Da~~-l~~~-~~~~FD 172 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW------GAP-LAVTQAPPRA-LAEA-FGTYFH 172 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------CCC-CEEECSCHHH-HHHH-HCSCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCe-EEEEECCHHH-hhhh-ccccCC
Confidence 568999999999999999998764 68999999999999999988775 777 9999999874 3321 257899
Q ss_pred EEEEeCCC---------Ccccccccccc-----ccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPD---------PHFKEKNHRRR-----VISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpd---------P~~k~~h~krr-----~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++-|. |-.+....... -.+..+++.+.++|||||+|+++|
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99998764 21110000000 123679999999999999999865
No 189
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.38 E-value=2e-12 Score=117.16 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=86.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccC-CCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYF-EKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~-~~~s~ 143 (252)
...|||+|||+|.+++.+|.. +...++|+|+++.+++.|++++... ++. |+.++++|+.+.++... ....+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n------~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN------GVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT------TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc------CCCccceEEECCHHHHHHHHHhhCCCC
Confidence 458999999999999999987 3458999999999999999988653 666 89999999976443211 24689
Q ss_pred cEEEEeCCCCccccccc-cccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 144 TKMFFLFPDPHFKEKNH-RRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~-krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
|.|+++.|--.....+. ...-....++..+.++|+|||.+++.+.+.
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 99999755311110000 000113468899999999999999987653
No 190
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=4.6e-12 Score=117.58 Aligned_cols=115 Identities=13% Similarity=0.135 Sum_probs=87.7
Q ss_pred CCceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
+...|||+|||+|..+..+|+..+ ...++|+|+++.+++.+++++... ++.|+.++++|+.. +.. ..++++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~------g~~nv~~~~~D~~~-~~~-~~~~~f 188 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC------GISNVALTHFDGRV-FGA-AVPEMF 188 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCCSTT-HHH-HSTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCCHHH-hhh-hccccC
Confidence 356899999999999999999864 578999999999999999988765 77899999999874 331 135789
Q ss_pred cEEEEeCCCCc----ccccccccc----------ccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPH----FKEKNHRRR----------VISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~----~k~~h~krr----------~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+++-|.-- .+....+.+ -.+..+|+.+.++|||||+|++.|
T Consensus 189 D~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 189 DAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 99999866321 000000000 124578999999999999999976
No 191
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.37 E-value=1.1e-12 Score=112.73 Aligned_cols=113 Identities=10% Similarity=-0.027 Sum_probs=86.6
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..|||||||+|.++..+++. + ..++++|+++.+++.|++++..... ....+++.++.+|+.+.+ +++|.|
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~--~~~~~rv~~~~~D~~~~~------~~fD~I 143 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHE--VKNNKNFTHAKQLLDLDI------KKYDLI 143 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHH--HHTCTTEEEESSGGGSCC------CCEEEE
T ss_pred CEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcc--ccCCCeEEEEechHHHHH------hhCCEE
Confidence 48999999999999999988 7 8999999999999988765421100 002357999999987422 789999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch----HHHHHHHHHHhc
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE----ELGDWMRSCLEN 202 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~----~~~~~~~~~~~~ 202 (252)
++..++|+ .+++.+.++|+|||.+++.+.+. .....+.+.+..
T Consensus 144 i~d~~dp~-------------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 190 (262)
T 2cmg_A 144 FCLQEPDI-------------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGG 190 (262)
T ss_dssp EESSCCCH-------------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHT
T ss_pred EECCCChH-------------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 99988876 39999999999999999976442 344445555543
No 192
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.37 E-value=1.2e-12 Score=120.62 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=87.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|..+..+|...+ ...++|+|+++.+++.+++++... ++.|+.++++|+.. +...+ ++.+|
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~------g~~nv~v~~~Da~~-l~~~~-~~~FD 177 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW------GVSNAIVTNHAPAE-LVPHF-SGFFD 177 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH------TCSSEEEECCCHHH-HHHHH-TTCEE
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEeCCHHH-hhhhc-cccCC
Confidence 56899999999999999999855 468999999999999999998776 78899999999874 33222 57899
Q ss_pred EEEEeCCCCc----cccccccc----------cccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPH----FKEKNHRR----------RVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~----~k~~h~kr----------r~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+++-|.-- .+....+. .-.+..+|+.+.++|||||+|+++|
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999876211 00000000 0134478999999999999999866
No 193
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.36 E-value=4e-12 Score=106.97 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=89.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
+..|||||||+|.+++.+|+..|...++|+|+++.+++.|++++... ++. +|.+..+|+.+.+. +.+.+|
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~------gl~~~I~~~~gD~l~~~~---~~~~~D 92 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH------GLTSKIDVRLANGLSAFE---EADNID 92 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT------TCTTTEEEEECSGGGGCC---GGGCCC
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEECchhhccc---cccccC
Confidence 46899999999999999999988889999999999999999998764 665 59999999865332 233699
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
.|++--- ... +-..++......|+++|.|+++.... ...+.+.+.+++
T Consensus 93 ~IviaGm---------Gg~-lI~~IL~~~~~~l~~~~~lIlqp~~~--~~~lr~~L~~~G 140 (230)
T 3lec_A 93 TITICGM---------GGR-LIADILNNDIDKLQHVKTLVLQPNNR--EDDLRKWLAAND 140 (230)
T ss_dssp EEEEEEE---------CHH-HHHHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHTT
T ss_pred EEEEeCC---------chH-HHHHHHHHHHHHhCcCCEEEEECCCC--hHHHHHHHHHCC
Confidence 9875210 000 12357888888999999999987543 445556666654
No 194
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.36 E-value=8.4e-12 Score=114.49 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=89.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc-cCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN-YFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~-~~~~~s~d 144 (252)
...|||+|||+|.+++.+|+. ...++|+|+|+.+++.|++++... +++|+.|+++|+.+.+.. .+.++++|
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~------~~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN------GLQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEECCHHHHhhhhhhhcCCCC
Confidence 458999999999999999998 678999999999999999887653 677999999999764432 24457899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCL 200 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~ 200 (252)
.|+++.|-.. ...+++.+.+ ++|++.+++.++...++.......
T Consensus 359 ~Vv~dPPr~g-----------~~~~~~~l~~-~~p~~ivyvsc~p~tlard~~~l~ 402 (433)
T 1uwv_A 359 KVLLDPARAG-----------AAGVMQQIIK-LEPIRIVYVSCNPATLARDSEALL 402 (433)
T ss_dssp EEEECCCTTC-----------CHHHHHHHHH-HCCSEEEEEESCHHHHHHHHHHHH
T ss_pred EEEECCCCcc-----------HHHHHHHHHh-cCCCeEEEEECChHHHHhhHHHHH
Confidence 9998655321 1246666554 799999999998877777654443
No 195
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.36 E-value=2.9e-12 Score=113.92 Aligned_cols=103 Identities=15% Similarity=0.214 Sum_probs=78.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +...++|+|+++ +++.|++++... ++ +++.++.+|+.+ ++ ++++++|
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~------~~~~~i~~~~~d~~~-~~--~~~~~~D 133 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLN------KLEDTITLIKGKIEE-VH--LPVEKVD 133 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHT------TCTTTEEEEESCTTT-SC--CSCSCEE
T ss_pred CCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHc------CCCCcEEEEEeeHHH-hc--CCCCcEE
Confidence 458999999999999999988 356899999996 999998877653 45 689999999874 43 5568999
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIY 184 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~ 184 (252)
.|+.+.. ++.- .+. .....++.++.++|||||.++
T Consensus 134 ~Ivs~~~-~~~l-~~~---~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 134 VIISEWM-GYFL-LFE---SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEECCC-BTTB-TTT---CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEcCc-hhhc-cCH---HHHHHHHHHHHhhcCCCcEEE
Confidence 9997641 1100 000 012358999999999999987
No 196
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.35 E-value=4.3e-12 Score=113.57 Aligned_cols=105 Identities=17% Similarity=0.241 Sum_probs=81.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++|+|+ +.+++.|++++... ++. ++.++.+|+.+. ++. .+|
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~----~~~-~~D 250 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA------GLADRVTVAEGDFFKP----LPV-TAD 250 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------TCTTTEEEEECCTTSC----CSC-CEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc------CCCCceEEEeCCCCCc----CCC-CCC
Confidence 45899999999999999999999999999999 99999998877553 443 899999998532 333 499
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|++...-...... ....+++++.++|+|||++++...
T Consensus 251 ~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDE------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEeccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 99886532211100 012699999999999999988654
No 197
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.35 E-value=6.3e-13 Score=112.74 Aligned_cols=115 Identities=10% Similarity=-0.014 Sum_probs=79.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhh-------------cC--CCC--------ccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRV-------------SN--PGQ--------YQN 122 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~-------------~~--~~~--------~~n 122 (252)
...|||||||+|.++..++...+ ..++|+|+|+.+++.|++++..... .. ... ..+
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 45899999999999999998855 5899999999999998876532100 00 000 013
Q ss_pred E-EEEeCCcccccCccCCC---CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 123 I-SVVRTNSMKYIPNYFEK---GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 123 v-~~~~~da~~~l~~~~~~---~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+ .++.+|+.. .. .+++ +++|.|++.+.-.+... + ......+++++.++|||||.|++.+
T Consensus 136 v~~~~~~d~~~-~~-~~~~~~~~~fD~v~~~~~l~~~~~-~---~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 136 IKQVLKCDVTQ-SQ-PLGGVSLPPADCLLSTLCLDAACP-D---LPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp EEEEEECCTTS-SS-TTTTCCCCCEEEEEEESCHHHHCS-S---HHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred heeEEEeeecc-CC-CCCccccCCccEEEEhhhhhhhcC-C---hHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 8 899999864 22 2334 89999998764220000 0 0012369999999999999999976
No 198
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.35 E-value=5.5e-12 Score=111.03 Aligned_cols=105 Identities=16% Similarity=0.238 Sum_probs=82.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++|+|++ .+++.|++++... ++ .++.++.+|+.. .+ ++. .+|
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~-~~D 234 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ------GVASRYHTIAGSAFE-VD--YGN-DYD 234 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH------TCGGGEEEEESCTTT-SC--CCS-CEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc------CCCcceEEEeccccc-CC--CCC-CCc
Confidence 468999999999999999999999999999999 9999999887654 44 469999999863 22 333 499
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-...... ....+++++.++|+|||.+++..
T Consensus 235 ~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 235 LVLLPNFLHHFDVA------TCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhccCCHH------HHHHHHHHHHHhCCCCcEEEEEe
Confidence 99985432211000 11369999999999999998865
No 199
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=1.9e-11 Score=111.86 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=84.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.+++.+|+. ...++|+|+++.+++.|++++... ++. +.|+.+|+.+.++ . .+|.
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~n------gl~-v~~~~~d~~~~~~----~-~fD~ 356 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEIN------NVD-AEFEVASDREVSV----K-GFDT 356 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH------TCC-EEEEECCTTTCCC----T-TCSE
T ss_pred CCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChHHcCc----c-CCCE
Confidence 458999999999999999987 568999999999999999887654 566 9999999875332 2 7999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHH
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMR 197 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~ 197 (252)
|+++.|-.- ....+++.+. .|+|||.+++.++...++..+.
T Consensus 357 Vv~dPPr~g----------~~~~~~~~l~-~l~p~givyvsc~p~tlarDl~ 397 (425)
T 2jjq_A 357 VIVDPPRAG----------LHPRLVKRLN-REKPGVIVYVSCNPETFARDVK 397 (425)
T ss_dssp EEECCCTTC----------SCHHHHHHHH-HHCCSEEEEEESCHHHHHHHHH
T ss_pred EEEcCCccc----------hHHHHHHHHH-hcCCCcEEEEECChHHHHhHHh
Confidence 999655211 1234777665 5999999999998777665544
No 200
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=9.6e-12 Score=105.52 Aligned_cols=117 Identities=17% Similarity=0.117 Sum_probs=87.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCC-cc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKG-QL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~-s~ 143 (252)
+..|||||||+|.+++.+|+..|...++|+|+++.+++.|++++... ++. +|.+..+|+.+.+ .++ .+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~------gl~~~I~v~~gD~l~~~----~~~~~~ 91 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS------GLTEQIDVRKGNGLAVI----EKKDAI 91 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT------TCTTTEEEEECSGGGGC----CGGGCC
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEEecchhhcc----Cccccc
Confidence 46899999999999999999988889999999999999999998764 665 4999999986533 233 59
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.- .... +-..++......|+++|.|+++.... ...+.+.+.+++
T Consensus 92 D~Iviag---------mGg~-lI~~IL~~~~~~L~~~~~lIlq~~~~--~~~lr~~L~~~G 140 (244)
T 3gnl_A 92 DTIVIAG---------MGGT-LIRTILEEGAAKLAGVTKLILQPNIA--AWQLREWSEQNN 140 (244)
T ss_dssp CEEEEEE---------ECHH-HHHHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHHT
T ss_pred cEEEEeC---------CchH-HHHHHHHHHHHHhCCCCEEEEEcCCC--hHHHHHHHHHCC
Confidence 9987621 0001 12358888889999999999987542 333444444443
No 201
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.34 E-value=7.7e-12 Score=111.59 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=80.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++|+|+ +.+++.|++++... +++ ++.++.+|+.+ .+ +++. |
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~~~--D 258 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK------GVADRMRGIAVDIYK-ES--YPEA--D 258 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT------TCTTTEEEEECCTTT-SC--CCCC--S
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc------CCCCCEEEEeCcccc-CC--CCCC--C
Confidence 45899999999999999999999999999999 99999998877653 454 49999999863 22 4333 9
Q ss_pred EEEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-. |+.. ....+++++.++|+|||++++..
T Consensus 259 ~v~~~~vlh~~~d~-------~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 259 AVLFCRILYSANEQ-------LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEEESCGGGSCHH-------HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEEechhccCCHH-------HHHHHHHHHHHhcCCCCEEEEEe
Confidence 998765322 2110 01369999999999999998865
No 202
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.34 E-value=2.4e-12 Score=107.47 Aligned_cols=101 Identities=16% Similarity=0.253 Sum_probs=76.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++..+ .++|+|+|+.+++.|+++ .+++.++.+|+.. ++ + ++++|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~-----------~~~~~~~~~d~~~-~~--~-~~~~D~ 103 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR-----------LPDATLHQGDMRD-FR--L-GRKFSA 103 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH-----------CTTCEEEECCTTT-CC--C-SSCEEE
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh-----------CCCCEEEECCHHH-cc--c-CCCCcE
Confidence 45899999999999999999965 899999999999887653 2468999999863 43 3 678999
Q ss_pred EEEeC-CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 146 MFFLF-PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 146 i~~~f-pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|++.+ .-.+.... -....+++++.++|+|||.+++.+.
T Consensus 104 v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 104 VVSMFSSVGYLKTT-----EELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp EEECTTGGGGCCSH-----HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEcCchHhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99543 11111000 0113699999999999999999653
No 203
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.34 E-value=1.5e-11 Score=110.68 Aligned_cols=107 Identities=11% Similarity=0.086 Sum_probs=85.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...||||| |+|.+++.++...+...++|+|+++.|++.|++++... ++.|+.++.+|+.+.++.. .++++|.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~------g~~~v~~~~~D~~~~l~~~-~~~~fD~ 244 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI------GYEDIEIFTFDLRKPLPDY-ALHKFDT 244 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH------TCCCEEEECCCTTSCCCTT-TSSCBSE
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCEEEEEChhhhhchhh-ccCCccE
Confidence 45899999 99999999999988789999999999999999988765 5668999999987534321 2468999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCc-EEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGG-IIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG-~l~~~td~ 189 (252)
|+++.|-.+. + ...+++.+.++|+||| .+++.+..
T Consensus 245 Vi~~~p~~~~---~------~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 245 FITDPPETLE---A------IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEECCCSSHH---H------HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEECCCCchH---H------HHHHHHHHHHHcccCCeEEEEEEec
Confidence 9998653321 1 1579999999999999 44665543
No 204
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.34 E-value=8.2e-13 Score=114.29 Aligned_cols=115 Identities=13% Similarity=0.007 Sum_probs=75.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHH-------------hhcCCCC-------------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILAL-------------RVSNPGQ------------- 119 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~-------------~~~~~~~------------- 119 (252)
...|||||||+|.+.. ++...+...|+|+|+|+.|++.|++++... ... .+
T Consensus 72 ~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLI--EGKGECWQDKERQLR 148 (289)
T ss_dssp CSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH--HCSCCCHHHHHHHHH
T ss_pred CCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHh--cCcccchhhhHHHHH
Confidence 4589999999999544 343334669999999999999888754210 000 00
Q ss_pred cccEEEEeCCcccccC---ccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 120 YQNISVVRTNSMKYIP---NYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 120 ~~nv~~~~~da~~~l~---~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+.++.+|+...++ ..++++++|.|++++.-.|..... .....+|+++.++|||||.|++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~----~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDL----ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSH----HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCH----HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0126788889864232 124567899999987543311000 001369999999999999999963
No 205
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=3.4e-12 Score=110.45 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=81.7
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~ 143 (252)
++.+|||+|||+|.+++.+|+.. ...++|+|+++.+++.+++|+... ++. ++.++++|+.+. ...+.+
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N------~v~~~v~~~~~D~~~~----~~~~~~ 193 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLN------KVEDRMSAYNMDNRDF----PGENIA 193 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHT------TCTTTEEEECSCTTTC----CCCSCE
T ss_pred CCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHc------CCCCcEEEEeCcHHHh----ccccCC
Confidence 46699999999999999999884 468999999999999999998664 554 599999998753 336789
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+++.|.-- ..++..+.++||+||.|++-+
T Consensus 194 D~Vi~~~p~~~------------~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 194 DRILMGYVVRT------------HEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEEEECCCSSG------------GGGHHHHHHHEEEEEEEEEEE
T ss_pred CEEEECCCCcH------------HHHHHHHHHHcCCCCEEEEEe
Confidence 99998865221 248999999999999997643
No 206
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.33 E-value=4.7e-12 Score=108.69 Aligned_cols=105 Identities=10% Similarity=0.067 Sum_probs=72.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+|++ +..|+|||+|+.|++.|++++.. ..-+..+...+.. +. ...++++|.
T Consensus 46 g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~-------~~v~~~~~~~~~~--~~-~~~~~~fD~ 113 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALAD-------RCVTIDLLDITAE--IP-KELAGHFDF 113 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSS-------SCCEEEECCTTSC--CC-GGGTTCCSE
T ss_pred cCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHh-------ccceeeeeecccc--cc-cccCCCccE
Confidence 458999999999999999998 56899999999999998876421 1112222222210 01 112568999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|++++.-.+..... ...+++.+.++| |||++++....
T Consensus 114 Vv~~~~l~~~~~~~------~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 114 VLNDRLINRFTTEE------ARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp EEEESCGGGSCHHH------HHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred EEEhhhhHhCCHHH------HHHHHHHHHHhC-cCcEEEEEecc
Confidence 99876433221111 125899999999 99999998754
No 207
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.33 E-value=7.1e-12 Score=111.29 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=82.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++|+|+ +.+++.|++++... +. +++.++.+|+.+ .+ .+.+..+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~-~~~~~~~D 250 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH------DLGGRVEFFEKNLLD-AR-NFEGGAAD 250 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT------TCGGGEEEEECCTTC-GG-GGTTCCEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc------CCCCceEEEeCCccc-Cc-ccCCCCcc
Confidence 45899999999999999999999999999999 88999998877553 43 579999999864 22 12356799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-.+.... ....+++++.++|+|||+|++..
T Consensus 251 ~v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 251 VVMLNDCLHYFDAR------EAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEecccccCCHH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 99986533221110 01369999999999999999864
No 208
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.32 E-value=5.8e-13 Score=114.01 Aligned_cols=117 Identities=13% Similarity=-0.043 Sum_probs=76.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhc-------------CCC----------Cccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVS-------------NPG----------QYQN 122 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~-------------~~~----------~~~n 122 (252)
+..|||||||+|.++..++... ...|+|+|+|+.|++.|++++...... ... ...+
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4589999999998887776653 237999999999999998765321000 000 0124
Q ss_pred EE-EEeCCcccccCc-cCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 123 IS-VVRTNSMKYIPN-YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 123 v~-~~~~da~~~l~~-~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+. ++++|+....+. ....+++|.|+.++.-.+... .+.-...++++++++|||||.|++.+
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~----~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC----SLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS----SHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC----CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 55 899998742220 012568999998864222100 00001258999999999999999985
No 209
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=1.3e-11 Score=110.69 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=81.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC-cccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ-YQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~-~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++++|+ +.+++.|++++... + .++|.++.+|+.+ .++. .+|
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------~l~~~v~~~~~d~~~----~~p~-~~D 270 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR------GLADRCEILPGDFFE----TIPD-GAD 270 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------TCTTTEEEEECCTTT----CCCS-SCS
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc------CcCCceEEeccCCCC----CCCC-Cce
Confidence 45899999999999999999999999999999 99999998877553 3 3689999999752 2444 799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-.+.... ....++++++++|+|||+|++..
T Consensus 271 ~v~~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 271 VYLIKHVLHDWDDD------DVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEhhhhhccCCHH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 99875432111100 01259999999999999999864
No 210
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=4.9e-12 Score=114.65 Aligned_cols=112 Identities=11% Similarity=0.159 Sum_probs=82.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
+..|||+|||+|.+++.+|.. +..++|+|+|+.+++.|++++... ++. ..+.++|+.+.+.. + .+.+|.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~n------g~~-~~~~~~D~~~~l~~-~-~~~fD~ 283 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRL------GLR-VDIRHGEALPTLRG-L-EGPFHH 283 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH------TCC-CEEEESCHHHHHHT-C-CCCEEE
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHh------CCC-CcEEEccHHHHHHH-h-cCCCCE
Confidence 568999999999999999998 445999999999999999988764 444 35679999865543 2 334999
Q ss_pred EEEeCCCCcccccccccc--ccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRR--VISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr--~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|+++.|. +.+.+..... -....++..+.++|+|||.|++.+.+
T Consensus 284 Ii~dpP~-f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 284 VLLDPPT-LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEECCCC-CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECCCc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9998553 2211111000 11246899999999999999977754
No 211
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.32 E-value=7.8e-12 Score=111.38 Aligned_cols=105 Identities=16% Similarity=0.240 Sum_probs=81.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++++|+ +.+++.|++++... ++. ++.++.+|+.+. ++. .+|
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~----~~~-~~D 251 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE------GLSDRVDVVEGDFFEP----LPR-KAD 251 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT------TCTTTEEEEECCTTSC----CSS-CEE
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc------CCCCceEEEeCCCCCC----CCC-Ccc
Confidence 45899999999999999999999999999999 99999998877553 443 899999997532 333 499
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|++...-...... ....+++++.++|+|||.+++...
T Consensus 252 ~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 252 AIILSFVLLNWPDH------DAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEEcccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEEE
Confidence 99876532111100 012599999999999999998754
No 212
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.32 E-value=5.1e-12 Score=113.88 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=78.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.+++.+|+.. ...++|||+| .|++.|++++... ++. ++.++++|+.+ +. ++ +.+|
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~------~~~~~v~~~~~d~~~-~~--~~-~~~D 131 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKAN------NLDHIVEVIEGSVED-IS--LP-EKVD 131 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHT------TCTTTEEEEESCGGG-CC--CS-SCEE
T ss_pred CCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHc------CCCCeEEEEECchhh-cC--cC-Ccce
Confidence 4589999999999999999983 3489999999 9999998877653 454 59999999874 43 33 7899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+++...-... + .-....++..+.++|||||.|++.
T Consensus 132 ~Iv~~~~~~~l~--~---e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 132 VIISEWMGYFLL--R---ESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEECCCBTTBT--T---TCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEEcChhhccc--c---hHHHHHHHHHHHhhCCCCeEEEEe
Confidence 999854211110 0 001235899999999999999763
No 213
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=1.1e-11 Score=102.82 Aligned_cols=93 Identities=18% Similarity=0.294 Sum_probs=73.4
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..|||||||+|.++..++.. +|+|+++.+++.|+++ ++.++.+|+.. ++ ++++++|.|
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~-~~--~~~~~fD~v 106 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------------GVFVLKGTAEN-LP--LKDESFDFA 106 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------------TCEEEECBTTB-CC--SCTTCEEEE
T ss_pred CcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------------CCEEEEccccc-CC--CCCCCeeEE
Confidence 47999999999999988765 9999999999877542 68899999863 44 567899999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
++...-.+... ...+++++.++|+|||.+++.+.+
T Consensus 107 ~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 107 LMVTTICFVDD--------PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp EEESCGGGSSC--------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcchHhhccC--------HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 98754322211 136999999999999999998654
No 214
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.30 E-value=3.5e-11 Score=106.41 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=77.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +...++|+|++ .+++.|++++... ++ +++.++.+|+.+ ++ ++++.+|
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~------~~~~~i~~~~~d~~~-~~--~~~~~~D 107 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELN------GFSDKITLLRGKLED-VH--LPFPKVD 107 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHT------TCTTTEEEEESCTTT-SC--CSSSCEE
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHc------CCCCCEEEEECchhh-cc--CCCCccc
Confidence 458999999999999999987 45689999999 6899888877553 44 469999999874 43 5567899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIY 184 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~ 184 (252)
.|++..+..... + ......++..+.++|+|||.++
T Consensus 108 ~Ivs~~~~~~l~--~---~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 108 IIISEWMGYFLL--Y---ESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEEECCCBTTBS--T---TCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEeCchhhcc--c---HHHHHHHHHHHHhhcCCCeEEE
Confidence 999864322110 0 0112368899999999999997
No 215
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=5e-12 Score=102.60 Aligned_cols=107 Identities=11% Similarity=0.070 Sum_probs=74.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC---------CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEE-eCCccccc-
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE---------VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVV-RTNSMKYI- 134 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~---------~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~-~~da~~~l- 134 (252)
...|||||||+|.++..+++..+. ..++|+|+++.+ ...++.++ .+|+....
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------------CCTTCEEECSCCTTSHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------------cCCCCeEEEeccCCCHHH
Confidence 458999999999999999999764 789999999831 34578899 88875310
Q ss_pred ----CccCCCCcccEEEEeCCCCcccc---ccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 135 ----PNYFEKGQLTKMFFLFPDPHFKE---KNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 135 ----~~~~~~~s~d~i~~~fpdP~~k~---~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
...++++++|.|+.+++..+... .+....-....+++++.++|+|||.|++.+-.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 01244568999998764332110 00000001136899999999999999998643
No 216
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.28 E-value=8.2e-12 Score=108.65 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=69.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEE-eCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVV-RTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~-~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++. +...|+|||+++.|++.+.+ ..+++..+ ..|+...-...++..++|
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r-----------~~~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLR-----------QDDRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHH-----------TCTTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHH-----------hCcccceecccCceecchhhCCCCCCC
Confidence 458999999999999999987 45689999999999976432 12234333 345442111224455699
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|++....-+. ..+|.++.++|+|||.+++.
T Consensus 154 ~v~~d~sf~sl-----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFISL-----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSSCG-----------GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHhhH-----------HHHHHHHHHHcCcCCEEEEE
Confidence 99876543322 35999999999999999986
No 217
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.27 E-value=1.3e-11 Score=108.75 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=81.1
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCcccE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
..|||||||+|.++..+++.+|+..++|+|+ +.+++.|++++... ++ +++.++.+|+.+ + ++ ..+|.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~--~--~~-~~~D~ 236 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL------LAGERVSLVGGDMLQ--E--VP-SNGDI 236 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH------HHTTSEEEEESCTTT--C--CC-SSCSE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc------CCCCcEEEecCCCCC--C--CC-CCCCE
Confidence 5899999999999999999999999999999 99999998876543 33 579999999763 2 33 57999
Q ss_pred EEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++...-. |... ....+++.+.++|+|||++++..
T Consensus 237 v~~~~vl~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 237 YLLSRIIGDLDEA-------ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEESCGGGCCHH-------HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEchhccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 99865432 2111 11369999999999999999974
No 218
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.27 E-value=1.7e-11 Score=103.43 Aligned_cols=99 Identities=11% Similarity=0.033 Sum_probs=62.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc-cCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN-YFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~-~~~~~s~d 144 (252)
...|||||||+|.++..+++.. ...++|||+|+.|++.|.++.... ......|+.++..+ .++. .++..++|
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~d~~~~D 110 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERV---VVMEQFNFRNAVLA---DFEQGRPSFTSID 110 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTE---EEECSCCGGGCCGG---GCCSCCCSEEEEC
T ss_pred CCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccc---cccccceEEEeCHh---HcCcCCCCEEEEE
Confidence 4489999999999999999983 358999999999998765421100 00011122222211 1111 12233455
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+++++ ..++.++.++|||||.+++.+
T Consensus 111 ~v~~~l----------------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL----------------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CSSSCG----------------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEhhhH----------------HHHHHHHHHhccCCCEEEEEE
Confidence 444332 249999999999999999975
No 219
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.27 E-value=5.2e-12 Score=103.33 Aligned_cols=122 Identities=12% Similarity=0.132 Sum_probs=83.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC------ccCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP------NYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~------~~~~ 139 (252)
...|||+|||+|.++..+|++ ...++|||+++. ...+|+.++++|+.+ .. ..+.
T Consensus 26 g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~-----------------~~~~~v~~~~~D~~~-~~~~~~~~~~~~ 85 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM-----------------EEIAGVRFIRCDIFK-ETIFDDIDRALR 85 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC-----------------CCCTTCEEEECCTTS-SSHHHHHHHHHH
T ss_pred CCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc-----------------ccCCCeEEEEccccC-HHHHHHHHHHhh
Confidence 458999999999999999998 779999999874 135689999999863 21 1111
Q ss_pred ---CCcccEEEEeCCCCcccc---ccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCCCcccc
Q 025492 140 ---KGQLTKMFFLFPDPHFKE---KNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHPMFEAL 209 (252)
Q Consensus 140 ---~~s~d~i~~~fpdP~~k~---~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~~~~~ 209 (252)
.+.+|.|+.+.+..+... .+....-.....++.+.++|||||.|++.+-...-...+...+... |..+
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~--F~~v 159 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN--FSSY 159 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG--EEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh--cCEE
Confidence 148999998764332211 1111111234678889999999999998775444445556666433 6555
No 220
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.27 E-value=1.4e-11 Score=109.79 Aligned_cols=103 Identities=12% Similarity=0.076 Sum_probs=76.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+|+. +...++|||+++ +++.|++++... ++ +++.++.+|+.+ ++ + ++++|
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~------~l~~~v~~~~~d~~~-~~--~-~~~~D 118 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN------NLTDRIVVIPGKVEE-VS--L-PEQVD 118 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT------TCTTTEEEEESCTTT-CC--C-SSCEE
T ss_pred cCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHc------CCCCcEEEEEcchhh-CC--C-CCcee
Confidence 458999999999999999986 456999999996 888888776553 55 689999999874 33 3 36799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+...+.-..... -....+..+.++|||||.+++.
T Consensus 119 ~Ivs~~~~~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 119 IIISEPMGYMLFNE------RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEECCCBTTBTTT------SHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEeCchhcCChH------HHHHHHHHHHhhcCCCeEEEEe
Confidence 99986542211000 0125777889999999999864
No 221
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.26 E-value=1.1e-11 Score=110.21 Aligned_cols=112 Identities=10% Similarity=0.193 Sum_probs=84.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-----CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-----VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-----~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~ 140 (252)
...|||+|||+|.++..+++..+. ..++|+|+++.+++.|+.++... ++ ++.++++|+... ...
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~------g~-~~~i~~~D~l~~----~~~ 199 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ------RQ-KMTLLHQDGLAN----LLV 199 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH------TC-CCEEEESCTTSC----CCC
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC------CC-CceEEECCCCCc----ccc
Confidence 458999999999999999988654 78999999999999999887654 44 689999997531 235
Q ss_pred CcccEEEEeCCCCcccccccccc----------ccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRR----------VISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr----------~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
..+|.|+.|.|-.+.......++ .....+++.+.+.|+|||++.+.+.
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 78999999987433211100000 0113589999999999999999883
No 222
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.26 E-value=2.9e-11 Score=104.55 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=76.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEec-CHhHHHHHHHHHHHHhhcCCCCc-----ccEEEEeCCcccccCccC-
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMEL-RDKVTEYVKERILALRVSNPGQY-----QNISVVRTNSMKYIPNYF- 138 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDi-s~~~i~~a~~~~~~~~~~~~~~~-----~nv~~~~~da~~~l~~~~- 138 (252)
...|||||||+|.+++.+|+.. ...++|+|+ ++.+++.|+.++... .....++ +++.++..|..+......
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREH-TANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTT-CC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHh-hhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4589999999999999999873 348999999 899999999887210 0000233 378888666432221111
Q ss_pred --CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhc---C--CcEEEEEeCc
Q 025492 139 --EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLG---V--GGIIYTITDV 189 (252)
Q Consensus 139 --~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lk---p--gG~l~~~td~ 189 (252)
.++.+|.|++...--+.. ....+++.+.++|+ | ||.+++....
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~--------~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQ--------AHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGG--------GHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred hccCCCCCEEEEeCcccChH--------HHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 457899998743221111 12369999999999 9 9988776544
No 223
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.26 E-value=3.6e-11 Score=107.99 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=79.1
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC------
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK------ 140 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~------ 140 (252)
..|||+|||+|.+++.+|+. ...++|+|+++.+++.|++++... +++|+.|+.+|+.+.++.....
T Consensus 215 ~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~n------g~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAAN------HIDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHT------TCCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECCHHHHHHHHhhccccccc
Confidence 47999999999999999986 458999999999999999887653 7789999999997654321111
Q ss_pred -------CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe-CchHHHHHHH
Q 025492 141 -------GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT-DVEELGDWMR 197 (252)
Q Consensus 141 -------~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t-d~~~~~~~~~ 197 (252)
..+|.|+++.|-. .+...+.+.|+++|.+++.+ +...++..+.
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~--------------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~ 337 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRS--------------GLDSETEKMVQAYPRILYISCNPETLCKNLE 337 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTT--------------CCCHHHHHHHTTSSEEEEEESCHHHHHHHHH
T ss_pred cccccccCCCCEEEECcCcc--------------ccHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 3799998864421 13445666777887776665 4444444433
No 224
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.25 E-value=2.1e-11 Score=118.04 Aligned_cols=115 Identities=10% Similarity=0.105 Sum_probs=86.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc--cEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ--NISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~--nv~~~~~da~~~l~~~~~~~s~ 143 (252)
+..|||+|||+|.+++.+|... ...++|||+|+.+++.|++++... ++. ++.++++|+.+.++. ..+.+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~n------gl~~~~v~~i~~D~~~~l~~--~~~~f 610 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLN------GLTGRAHRLIQADCLAWLRE--ANEQF 610 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT------TCCSTTEEEEESCHHHHHHH--CCCCE
T ss_pred CCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc------CCCccceEEEecCHHHHHHh--cCCCc
Confidence 4589999999999999999864 346999999999999999988653 554 899999999865542 35789
Q ss_pred cEEEEeCCCCcccccc---ccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 144 TKMFFLFPDPHFKEKN---HRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h---~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|.|+++.|.--..+.. ....-....++..+.++|+|||.|++.+..
T Consensus 611 D~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 611 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9999976531100000 000012346899999999999999999876
No 225
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.24 E-value=2.4e-11 Score=109.59 Aligned_cols=108 Identities=11% Similarity=0.010 Sum_probs=83.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcC---------CCCcccEEEEeCCcccccCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSN---------PGQYQNISVVRTNSMKYIPN 136 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~---------~~~~~nv~~~~~da~~~l~~ 136 (252)
...|||+|||+|.+++.+|...+...++++|+++.+++.|++|+....... ..++.|+.++++|+...+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 348999999999999999999877789999999999999999986540000 00556799999999764432
Q ss_pred cCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 137 YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 137 ~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
. ...+|.|+++ |... ...++..+.+.|++||.+++..
T Consensus 128 -~-~~~fD~I~lD---P~~~---------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 -R-HRYFHFIDLD---PFGS---------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp -S-TTCEEEEEEC---CSSC---------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred -c-cCCCCEEEeC---CCCC---------HHHHHHHHHHhcCCCCEEEEEe
Confidence 2 4579999964 3211 1369999999999999988864
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.24 E-value=1.7e-11 Score=106.38 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=62.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++. ...++|||+++.+++.+++++.. .+. +|+.++++|+.. ++ + .++|
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~------~~~~~~v~~~~~D~~~-~~--~--~~fD 95 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQG------TPVASKLQVLVGDVLK-TD--L--PFFD 95 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTT------STTGGGEEEEESCTTT-SC--C--CCCS
T ss_pred CCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHh------cCCCCceEEEEcceec-cc--c--hhhc
Confidence 458999999999999999999 45899999999999998876532 233 689999999863 32 2 2789
Q ss_pred EEEEeCCCCcc
Q 025492 145 KMFFLFPDPHF 155 (252)
Q Consensus 145 ~i~~~fpdP~~ 155 (252)
.|+.|.|-.|.
T Consensus 96 ~vv~nlpy~~~ 106 (285)
T 1zq9_A 96 TCVANLPYQIS 106 (285)
T ss_dssp EEEEECCGGGH
T ss_pred EEEEecCcccc
Confidence 99999876553
No 227
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.24 E-value=1.3e-11 Score=109.98 Aligned_cols=120 Identities=17% Similarity=0.172 Sum_probs=88.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-----ccEEEEeCCcccccCccC-C
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-----QNISVVRTNSMKYIPNYF-E 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-----~nv~~~~~da~~~l~~~~-~ 139 (252)
...||+||||.|.++..+++..+ ..+++||+++.+++.|++++... ....+ ++++++.+|+...+.... .
T Consensus 189 pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l---~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKT---CGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC-------CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHh---ccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 34899999999999999998765 78999999999999998875321 00011 279999999987664311 3
Q ss_pred CCcccEEEEeCCC-CccccccccccccCHHHHHHH----HHhhcCCcEEEEEeCchHH
Q 025492 140 KGQLTKMFFLFPD-PHFKEKNHRRRVISPHLLDEY----AYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 140 ~~s~d~i~~~fpd-P~~k~~h~krr~~~~~~l~~~----~~~LkpgG~l~~~td~~~~ 192 (252)
.+.+|.|++..|+ |.-... ..+....|++.+ .++|+|||.+++.+.....
T Consensus 265 ~~~fDvII~D~~d~P~~~~p---~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSP---EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred CCCceEEEECCCCcccCcCc---hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 5789999999988 642211 124456788888 8999999999998866543
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=1.1e-10 Score=95.19 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=77.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||+|||+|.++..++.. +...++|+|+++.+++.|++++ . ++.++++|+.+ ++ +++|.
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~---------~--~~~~~~~d~~~-~~-----~~~D~ 113 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNC---------G--GVNFMVADVSE-IS-----GKYDT 113 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHC---------T--TSEEEECCGGG-CC-----CCEEE
T ss_pred CCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhc---------C--CCEEEECcHHH-CC-----CCeeE
Confidence 458999999999999999988 4457999999999999887653 1 79999999874 32 68999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENH 203 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 203 (252)
|+++.|-.+... -....+++++.++| |.+++..+.. -..++.+.+...
T Consensus 114 v~~~~p~~~~~~------~~~~~~l~~~~~~~---g~~~~~~~~~-~~~~~~~~~~~~ 161 (200)
T 1ne2_A 114 WIMNPPFGSVVK------HSDRAFIDKAFETS---MWIYSIGNAK-ARDFLRREFSAR 161 (200)
T ss_dssp EEECCCC-------------CHHHHHHHHHHE---EEEEEEEEGG-GHHHHHHHHHHH
T ss_pred EEECCCchhccC------chhHHHHHHHHHhc---CcEEEEEcCc-hHHHHHHHHHHC
Confidence 999876544321 12346899999998 4455555433 344555555443
No 229
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.21 E-value=4.5e-11 Score=107.23 Aligned_cols=96 Identities=17% Similarity=0.248 Sum_probs=73.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++++|+..++++|+ +.+++.|+ ..+++.++.+|+.+ .++++ |.
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~~v~~~~~d~~~----~~p~~--D~ 264 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP------------AFSGVEHLGGDMFD----GVPKG--DA 264 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC------------CCTTEEEEECCTTT----CCCCC--SE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh------------hcCCCEEEecCCCC----CCCCC--CE
Confidence 45899999999999999999999999999999 77765432 23689999999863 24444 88
Q ss_pred EEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++...-. |... ....+|++++++|+|||+|++..
T Consensus 265 v~~~~vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 265 IFIKWICHDWSDE-------HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEESCGGGBCHH-------HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEechhhcCCHH-------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 88765432 2111 01258999999999999999864
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.21 E-value=1.7e-11 Score=113.81 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=76.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.+++.+|+ .+...++|+|+++ +++.|++++... ++ +++.++.+|+.+ ++ + ++.+|
T Consensus 159 ~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~------gl~~~v~~~~~d~~~-~~--~-~~~fD 226 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSN------NLTDRIVVIPGKVEE-VS--L-PEQVD 226 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHT------TCTTTEEEEESCTTT-CC--C-SSCEE
T ss_pred CCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHc------CCCCcEEEEECchhh-Cc--c-CCCeE
Confidence 45899999999999999988 4677999999998 999998877653 55 689999999864 32 2 35899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|+.+.+.-..... -....+..+.++|||||.+++
T Consensus 227 ~Ivs~~~~~~~~~e------~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 227 IIISEPMGYMLFNE------RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEECCCCHHHHTCH------HHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEeCchHhcCcH------HHHHHHHHHHHhcCCCCEEEE
Confidence 99986441110000 012466678899999999985
No 231
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.20 E-value=1.8e-10 Score=101.22 Aligned_cols=136 Identities=10% Similarity=0.022 Sum_probs=91.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC-CCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE-KGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~-~~s~ 143 (252)
+..|||+|||+|..+..+|... +...++|+|+++.+++.+++++... ++.|+.++++|+.. +....+ ...+
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~------g~~~v~~~~~D~~~-~~~~~~~~~~f 175 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA------GVSCCELAEEDFLA-VSPSDPRYHEV 175 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCGGG-SCTTCGGGTTE
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCeEEEEeCChHh-cCccccccCCC
Confidence 5689999999999999999974 5678999999999999999988664 77899999999874 322111 1579
Q ss_pred cEEEEeCCCC----cccccc-------cccc-----ccCHHHHHHHHHhhcCCcEEEEEeCc--hHHHHHH-HHHHhcCC
Q 025492 144 TKMFFLFPDP----HFKEKN-------HRRR-----VISPHLLDEYAYVLGVGGIIYTITDV--EELGDWM-RSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP----~~k~~h-------~krr-----~~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~-~~~~~~~~ 204 (252)
|.|+++.|.- +.+... ...+ -.+..+|+.+.++|+ ||+|+..|=. .+-.+.. ...+..++
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~ 254 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNP 254 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTST
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCC
Confidence 9999875531 100000 0011 123567888888887 9999887632 2222333 33345566
Q ss_pred C-cccc
Q 025492 205 M-FEAL 209 (252)
Q Consensus 205 ~-~~~~ 209 (252)
. |+.+
T Consensus 255 ~~~~~~ 260 (309)
T 2b9e_A 255 GAFRLA 260 (309)
T ss_dssp TTEEEC
T ss_pred CcEEEe
Confidence 5 6544
No 232
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.20 E-value=5.4e-11 Score=101.84 Aligned_cols=118 Identities=16% Similarity=0.191 Sum_probs=81.5
Q ss_pred CceEEEEcCcccHHHHHHHHH-------CCC-----CeEEEEecCH---hHHH-----------HHHHHHHHHhh-----
Q 025492 66 KIQFADIGCGFGGLLISLSTL-------FPE-----VLMIGMELRD---KVTE-----------YVKERILALRV----- 114 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-------~p~-----~~~iGiDis~---~~i~-----------~a~~~~~~~~~----- 114 (252)
..+|||||||+|..++.+++. .|+ ..|+++|..+ +.+. .|+..+.....
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 469999999999999887765 674 5899999887 4444 33333221000
Q ss_pred ---cCCCCcccEEEEeCCcccccCccCCC---CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 115 ---SNPGQYQNISVVRTNSMKYIPNYFEK---GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 115 ---~~~~~~~nv~~~~~da~~~l~~~~~~---~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.-..+..|++++.+|+.+.++.. +. +.+|.|++ |+|..+++. ++.+..+++.++++|+|||+|..-|-
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~-~~~~~~~~D~ifl---D~fsp~~~p--~lw~~~~l~~l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQL-DDSLNQKVDAWFL---DGFAPAKNP--DMWTQNLFNAMARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGS-CGGGTTCEEEEEE---CSSCTTTCG--GGCCHHHHHHHHHHEEEEEEEEESCC
T ss_pred hheeccCCceEEEEEECcHHHHHhhc-ccccCCeEEEEEE---CCCCcccCh--hhcCHHHHHHHHHHcCCCcEEEEEeC
Confidence 00123468999999998767643 22 26788776 677555543 56678999999999999999986554
Q ss_pred c
Q 025492 189 V 189 (252)
Q Consensus 189 ~ 189 (252)
.
T Consensus 215 a 215 (257)
T 2qy6_A 215 A 215 (257)
T ss_dssp B
T ss_pred C
Confidence 3
No 233
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.19 E-value=4.7e-11 Score=106.58 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=76.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++++|+..++..|. +.+++.|++++. ..+.++|.++.+|+.+ ..++ ..|.
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~------~~~~~rv~~~~gD~~~---~~~~--~~D~ 247 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS------FQEEEQIDFQEGDFFK---DPLP--EADL 247 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC------C--CCSEEEEESCTTT---SCCC--CCSE
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh------hcccCceeeecCcccc---CCCC--CceE
Confidence 45899999999999999999999999999997 778887776542 2356799999999753 2232 4588
Q ss_pred EEEeCCC-CccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPD-PHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpd-P~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+++..-- -|+... ...+|+++++.|+|||+|+|.-
T Consensus 248 ~~~~~vlh~~~d~~-------~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 248 YILARVLHDWADGK-------CSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EEEESSGGGSCHHH-------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEeeeecccCCHHH-------HHHHHHHHHhhCCCCCEEEEEE
Confidence 8764321 122110 1258999999999999999864
No 234
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.19 E-value=4.2e-11 Score=103.47 Aligned_cols=111 Identities=13% Similarity=0.203 Sum_probs=75.3
Q ss_pred ceEEEEcCcccH----HHHHHHHHCC----CCeEEEEecCHhHHHHHHHHHHHHhhc---------------C--CCC--
Q 025492 67 IQFADIGCGFGG----LLISLSTLFP----EVLMIGMELRDKVTEYVKERILALRVS---------------N--PGQ-- 119 (252)
Q Consensus 67 ~~vLDIGcG~G~----~~~~lA~~~p----~~~~iGiDis~~~i~~a~~~~~~~~~~---------------~--~~~-- 119 (252)
..|+|+|||+|. +++.+++..+ +..++|+|+|+.|++.|++++...... . ..+
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 489999999999 5666676644 468999999999999998753100000 0 011
Q ss_pred ------cccEEEEeCCcccccCccCC-CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 120 ------YQNISVVRTNSMKYIPNYFE-KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 120 ------~~nv~~~~~da~~~l~~~~~-~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
..+|.|.++|+.+ .+ ++ .+.+|.|++..---++.. .....+++.+++.|+|||.|++-
T Consensus 187 ~v~~~lr~~V~F~~~dl~~-~~--~~~~~~fDlI~crnvliyf~~------~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLE-KQ--YNVPGPFDAIFCRNVMIYFDK------TTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EECHHHHTTEEEEECCTTC-SS--CCCCCCEEEEEECSSGGGSCH------HHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eechhhcccCeEEecccCC-CC--CCcCCCeeEEEECCchHhCCH------HHHHHHHHHHHHHhCCCcEEEEE
Confidence 0369999999864 22 33 578999997432111110 11246999999999999999883
No 235
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.18 E-value=8.1e-11 Score=105.49 Aligned_cols=96 Identities=16% Similarity=0.279 Sum_probs=73.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++++|+..++++|+ +.+++.|+ ..+++.++.+|+.+ + ++.+ |.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~~v~~~~~D~~~--~--~p~~--D~ 262 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP------------QFPGVTHVGGDMFK--E--VPSG--DT 262 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC------------CCTTEEEEECCTTT--C--CCCC--SE
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh------------hcCCeEEEeCCcCC--C--CCCC--CE
Confidence 46899999999999999999999999999999 77665432 24689999999863 2 4444 88
Q ss_pred EEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|++...-. |... ....+|++++++|+|||+|++..
T Consensus 263 v~~~~vlh~~~d~-------~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 263 ILMKWILHDWSDQ-------HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEEESCGGGSCHH-------HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEehHHhccCCHH-------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 88754322 2111 01258999999999999999864
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.17 E-value=9.4e-12 Score=107.06 Aligned_cols=108 Identities=11% Similarity=0.034 Sum_probs=70.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEE--eCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVV--RTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~--~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+|+. ..|+|||+++ |+..+.+. .. .....+ .|+.++ ++|+.. ++++++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~--~~-~~~~~~-~~v~~~~~~~D~~~-----l~~~~f 141 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV--PR-ITESYG-WNIVKFKSRVDIHT-----LPVERT 141 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC--CC-CCCBTT-GGGEEEECSCCTTT-----SCCCCC
T ss_pred CCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh--hh-hhhccC-CCeEEEecccCHhH-----CCCCCC
Confidence 458999999999999999988 5799999998 43211100 00 000001 279999 899863 346789
Q ss_pred cEEEEeCCCCcccccc-ccccccCHHHHHHHHHhhcCCc--EEEEEeCc
Q 025492 144 TKMFFLFPDPHFKEKN-HRRRVISPHLLDEYAYVLGVGG--IIYTITDV 189 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h-~krr~~~~~~l~~~~~~LkpgG--~l~~~td~ 189 (252)
|.|++++. ....... ...+ ...+|+.+.++||||| .|++.+-.
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~--~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESER--TIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHH--HHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCccchhHHH--HHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99999765 2110000 0000 0127899999999999 99987643
No 237
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.17 E-value=1.1e-11 Score=112.77 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=73.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEE--EEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNIS--VVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~--~~~~da~~~l~~~~~~~s~ 143 (252)
...|||||||+|.++..+++. +..++|+|+|+.+++.|+++ +.++.. +...++. .++ ++++++
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~-~l~--~~~~~f 172 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----------GIRVRTDFFEKATAD-DVR--RTEGPA 172 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----------TCCEECSCCSHHHHH-HHH--HHHCCE
T ss_pred CCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----------CCCcceeeechhhHh-hcc--cCCCCE
Confidence 568999999999999999997 55899999999999877642 222221 2223332 233 456899
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
|.|+++..-.+... ...+++++.++|||||.+++.+.+
T Consensus 173 D~I~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 173 NVIYAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99998754322211 136999999999999999998755
No 238
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=1.3e-10 Score=105.24 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=83.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC--------------------------------------CeEEEEecCHhHHHHHHH
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE--------------------------------------VLMIGMELRDKVTEYVKE 107 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~--------------------------------------~~~iGiDis~~~i~~a~~ 107 (252)
...|||+|||+|.+++.+|....+ ..++|+|+++.|++.|+.
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 457999999999999999886433 469999999999999999
Q ss_pred HHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcC--CcEEE
Q 025492 108 RILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV--GGIIY 184 (252)
Q Consensus 108 ~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp--gG~l~ 184 (252)
++... ++. ++.++++|+.+ ++ .+.++|.|++|.|-- .+.... -....+.+.+.+.||+ ||.++
T Consensus 282 Na~~~------gl~~~I~~~~~D~~~-~~---~~~~fD~Iv~NPPYg---~rl~~~-~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 282 NAVEA------GLGDLITFRQLQVAD-FQ---TEDEYGVVVANPPYG---ERLEDE-EAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp HHHHT------TCTTCSEEEECCGGG-CC---CCCCSCEEEECCCCC---CSHHHH-HHHHHHHHHHHHHHHTCTTCEEE
T ss_pred HHHHc------CCCCceEEEECChHh-CC---CCCCCCEEEECCCCc---cccCCc-hhHHHHHHHHHHHHhcCCCCEEE
Confidence 88664 665 59999999874 32 245899999986521 111000 0012356666777776 99999
Q ss_pred EEeCchHHHH
Q 025492 185 TITDVEELGD 194 (252)
Q Consensus 185 ~~td~~~~~~ 194 (252)
+.|.+.++..
T Consensus 348 iit~~~~l~~ 357 (393)
T 3k0b_A 348 VLTSYELFEE 357 (393)
T ss_dssp EEECCTTHHH
T ss_pred EEECCHHHHH
Confidence 9998877654
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.16 E-value=1.2e-11 Score=107.00 Aligned_cols=105 Identities=13% Similarity=0.068 Sum_probs=70.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEE--eCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVV--RTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~--~~da~~~l~~~~~~~s 142 (252)
...|||||||+|.++..+|++ ..|+|||+++ |+..+.++ ....... .|+.++ ++|+.. + ++++
T Consensus 83 g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-----~~~~~~~~~~v~~~~~~~D~~~-l----~~~~ 148 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-----PRLVETFGWNLITFKSKVDVTK-M----EPFQ 148 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-----CCCCCCTTGGGEEEECSCCGGG-C----CCCC
T ss_pred CCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-----hhhhhhcCCCeEEEeccCcHhh-C----CCCC
Confidence 568999999999999999998 5799999998 53222110 0000011 289999 999863 3 3678
Q ss_pred ccEEEEeCCCCccc---cccccccccCHHHHHHHHHhhcCCc--EEEEEeCc
Q 025492 143 LTKMFFLFPDPHFK---EKNHRRRVISPHLLDEYAYVLGVGG--IIYTITDV 189 (252)
Q Consensus 143 ~d~i~~~fpdP~~k---~~h~krr~~~~~~l~~~~~~LkpgG--~l~~~td~ 189 (252)
+|.|++++. .... ..+. + ...+|+.+.++||||| .|++.+-.
T Consensus 149 fD~Vvsd~~-~~~~~~~~d~~--~--~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 149 ADTVLCDIG-ESNPTAAVEAS--R--TLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSEEEECCC-CCCSCHHHHHH--H--HHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCEEEECCC-cCCCchhhhHH--H--HHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999999865 2210 0000 0 0127899999999999 99886533
No 240
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.16 E-value=3.1e-10 Score=102.60 Aligned_cols=115 Identities=15% Similarity=0.189 Sum_probs=85.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC--------------------------------------CeEEEEecCHhHHHHHHH
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE--------------------------------------VLMIGMELRDKVTEYVKE 107 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~--------------------------------------~~~iGiDis~~~i~~a~~ 107 (252)
...|||+|||+|.+++.+|....+ ..++|+|+++.+++.|+.
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 457999999999999999887322 579999999999999999
Q ss_pred HHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcC--CcEEE
Q 025492 108 RILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV--GGIIY 184 (252)
Q Consensus 108 ~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp--gG~l~ 184 (252)
++... ++. ++.|.++|+.+ +. .+.++|.|++|.|-- . +... .-.-..+.+.+.++|++ ||.++
T Consensus 276 Na~~~------gl~~~i~~~~~D~~~-l~---~~~~~D~Iv~NPPyg--~-rl~~-~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 276 NAEIA------GVDEYIEFNVGDATQ-FK---SEDEFGFIITNPPYG--E-RLED-KDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp HHHHH------TCGGGEEEEECCGGG-CC---CSCBSCEEEECCCCC--C-SHHH-HHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred HHHHc------CCCCceEEEECChhh-cC---cCCCCcEEEECCCCc--C-ccCC-HHHHHHHHHHHHHHHhhCCCCEEE
Confidence 98765 554 79999999875 32 246899999986622 1 1100 00112466777778887 99999
Q ss_pred EEeCchHHHH
Q 025492 185 TITDVEELGD 194 (252)
Q Consensus 185 ~~td~~~~~~ 194 (252)
+.|.+.++..
T Consensus 342 iit~~~~l~~ 351 (385)
T 3ldu_A 342 LITSYEDFEY 351 (385)
T ss_dssp EEESCTTHHH
T ss_pred EEECCHHHHH
Confidence 9998776654
No 241
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.16 E-value=5.6e-11 Score=106.58 Aligned_cols=96 Identities=17% Similarity=0.219 Sum_probs=73.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++++|+..++++|+ +.+++.|+ ..+++.++.+|+.+ + ++. +|.
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~------------~~~~v~~~~~d~~~--~--~~~--~D~ 270 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP------------PLSGIEHVGGDMFA--S--VPQ--GDA 270 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC------------CCTTEEEEECCTTT--C--CCC--EEE
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh------------hcCCCEEEeCCccc--C--CCC--CCE
Confidence 45899999999999999999999999999999 88775432 24679999999863 2 333 899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|++...-.+.... ....+|+++.++|+|||+|++.
T Consensus 271 v~~~~~lh~~~d~------~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 271 MILKAVCHNWSDE------KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEESSGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecccccCCHH------HHHHHHHHHHHhcCCCCEEEEE
Confidence 9986542211110 0126999999999999999986
No 242
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.16 E-value=9.7e-11 Score=104.22 Aligned_cols=96 Identities=15% Similarity=0.181 Sum_probs=74.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++.+|+..++|+|+ +.+++.|+ ..+++.++.+|+.+. ++ .+|.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~~v~~~~~d~~~~----~p--~~D~ 249 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS------------GSNNLTYVGGDMFTS----IP--NADA 249 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC------------CBTTEEEEECCTTTC----CC--CCSE
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc------------cCCCcEEEeccccCC----CC--CccE
Confidence 45899999999999999999999999999999 88876442 245799999998532 33 2899
Q ss_pred EEEeCCCC-ccccccccccccCHHHHHHHHHhhcC---CcEEEEEe
Q 025492 146 MFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGV---GGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~Lkp---gG~l~~~t 187 (252)
|++...-. |... ....+|+++.++||| ||+|++..
T Consensus 250 v~~~~~lh~~~d~-------~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 250 VLLKYILHNWTDK-------DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEESCGGGSCHH-------HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEeehhhccCCHH-------HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 98865422 2110 012699999999999 99998864
No 243
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.15 E-value=3.8e-11 Score=106.74 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=72.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC-cccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ-YQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~-~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.+|+..++++|++ .++. +.++ ...+ .+++.++.+|+.+ .++ ++|
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~------~~~~~~~~v~~~~~d~~~----~~p--~~D 249 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRL------DAPDVAGRWKVVEGDFLR----EVP--HAD 249 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCC------CCGGGTTSEEEEECCTTT----CCC--CCS
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccc------cccCCCCCeEEEecCCCC----CCC--CCc
Confidence 468999999999999999999999999999994 4332 1111 1112 3479999999742 234 899
Q ss_pred EEEEeCCCC-ccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDP-HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP-~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++...-. |+.. ....+|++++++|||||+|++..
T Consensus 250 ~v~~~~vlh~~~d~-------~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 250 VHVLKRILHNWGDE-------DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEEESCGGGSCHH-------HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEEehhccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 998865322 2110 01269999999999999999865
No 244
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=1.2e-10 Score=100.31 Aligned_cols=124 Identities=11% Similarity=0.117 Sum_probs=80.6
Q ss_pred ceEEEEcCcc--cHHHHHHHH-HCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC----
Q 025492 67 IQFADIGCGF--GGLLISLST-LFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE---- 139 (252)
Q Consensus 67 ~~vLDIGcG~--G~~~~~lA~-~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~---- 139 (252)
..|||||||. |..+..+|+ ..|+..++|||.|+.|++.|+.++.. ....++.|+++|+.+ +...+.
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~------~~~~~~~~v~aD~~~-~~~~l~~~~~ 152 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS------TPEGRTAYVEADMLD-PASILDAPEL 152 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC------CSSSEEEEEECCTTC-HHHHHTCHHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc------CCCCcEEEEEecccC-hhhhhccccc
Confidence 4899999997 445566655 57999999999999999999876521 234589999999874 211110
Q ss_pred CCccc-----EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc----hHHHHHHHHHHhc
Q 025492 140 KGQLT-----KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV----EELGDWMRSCLEN 202 (252)
Q Consensus 140 ~~s~d-----~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~~ 202 (252)
.+++| .|+++.--.|..... + -..+++.+.+.|+|||.|++.+-. .+....+.+....
T Consensus 153 ~~~~D~~~p~av~~~avLH~l~d~~-~----p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~ 219 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFVLDED-D----AVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA 219 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGSCGGG-C----HHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccccCcCCcchHHhhhhHhcCCchh-h----HHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh
Confidence 12333 466655444432110 0 025999999999999999987422 2334444444443
No 245
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.15 E-value=4.4e-10 Score=101.50 Aligned_cols=115 Identities=11% Similarity=0.136 Sum_probs=84.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC--------------------------------------CeEEEEecCHhHHHHHHH
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE--------------------------------------VLMIGMELRDKVTEYVKE 107 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~--------------------------------------~~~iGiDis~~~i~~a~~ 107 (252)
...+||.+||+|.+++..|....+ ..++|+|+++.|++.|+.
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 457999999999999999876433 469999999999999999
Q ss_pred HHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcC--CcEEE
Q 025492 108 RILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV--GGIIY 184 (252)
Q Consensus 108 ~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp--gG~l~ 184 (252)
|+... ++. ++.++++|+.+ ++ .+.++|.|++|.|-- .+... .-....+.+.+.+.||+ ||.++
T Consensus 275 Na~~~------gl~~~I~~~~~D~~~-l~---~~~~fD~Iv~NPPYG---~rl~~-~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 275 NAREV------GLEDVVKLKQMRLQD-FK---TNKINGVLISNPPYG---ERLLD-DKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp HHHHT------TCTTTEEEEECCGGG-CC---CCCCSCEEEECCCCT---TTTSC-HHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred HHHHc------CCCCceEEEECChHH-CC---ccCCcCEEEECCchh---hccCC-HHHHHHHHHHHHHHHhhCCCcEEE
Confidence 88764 665 49999999874 33 245899999886522 11100 00113466677778876 99999
Q ss_pred EEeCchHHHH
Q 025492 185 TITDVEELGD 194 (252)
Q Consensus 185 ~~td~~~~~~ 194 (252)
+.|.+.++..
T Consensus 341 iit~~~~l~~ 350 (384)
T 3ldg_A 341 ILTNDTDFEQ 350 (384)
T ss_dssp EEESCTTHHH
T ss_pred EEECCHHHHH
Confidence 9998777644
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.15 E-value=1.1e-10 Score=101.98 Aligned_cols=76 Identities=24% Similarity=0.334 Sum_probs=59.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. ...++|||+++.+++.|++++... +.+|+.++++|+.. ++ ..++|.
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~------~~~~v~~~~~D~~~-~~----~~~~D~ 109 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYE------GYNNLEVYEGDAIK-TV----FPKFDV 109 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHT------TCCCEEC----CCS-SC----CCCCSE
T ss_pred cCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECchhh-CC----cccCCE
Confidence 458999999999999999988 568999999999999998877542 56799999999863 32 347999
Q ss_pred EEEeCCCCc
Q 025492 146 MFFLFPDPH 154 (252)
Q Consensus 146 i~~~fpdP~ 154 (252)
|+++.|-.|
T Consensus 110 Vv~n~py~~ 118 (299)
T 2h1r_A 110 CTANIPYKI 118 (299)
T ss_dssp EEEECCGGG
T ss_pred EEEcCCccc
Confidence 999987554
No 247
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.14 E-value=6.9e-11 Score=97.36 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=73.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..++ ..++|+|+++. ++.++.+|+.. ++ ++++++|.
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------------------~~~~~~~d~~~-~~--~~~~~fD~ 118 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------------------DPRVTVCDMAQ-VP--LEDESVDV 118 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------------------STTEEESCTTS-CS--CCTTCEEE
T ss_pred CCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------------------CceEEEecccc-CC--CCCCCEeE
Confidence 3589999999999988874 57999999875 45678888764 43 66789999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH--HHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE--LGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~--~~~~~~~~~~~~~ 204 (252)
|++.+.-.+. ....+++++.++|+|||.+++..-... -.+.+.+.+.+.+
T Consensus 119 v~~~~~l~~~---------~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~G 170 (215)
T 2zfu_A 119 AVFCLSLMGT---------NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLG 170 (215)
T ss_dssp EEEESCCCSS---------CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTT
T ss_pred EEEehhcccc---------CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCC
Confidence 9987654321 124699999999999999999764432 2344455555554
No 248
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.14 E-value=1.6e-10 Score=104.61 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=84.1
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc--EEEEeCCcccccC-ccCCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQN--ISVVRTNSMKYIP-NYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n--v~~~~~da~~~l~-~~~~~~ 141 (252)
+..|||++||+|.+++.+|.+.++ ..++++|+++.+++.+++|+... ++.| +.++++|+.+.+. .. ..
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N------gl~~~~v~v~~~Da~~~l~~~~--~~ 124 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN------NIPEDRYEIHGMEANFFLRKEW--GF 124 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT------TCCGGGEEEECSCHHHHHHSCC--SS
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh------CCCCceEEEEeCCHHHHHHHhh--CC
Confidence 458999999999999999998654 58999999999999999998764 6766 9999999986554 32 45
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.+|.|+++ |. . ....++..+.+.|++||.|++....
T Consensus 125 ~fD~V~lD---P~-g--------~~~~~l~~a~~~Lk~gGll~~t~t~ 160 (392)
T 3axs_A 125 GFDYVDLD---PF-G--------TPVPFIESVALSMKRGGILSLTATD 160 (392)
T ss_dssp CEEEEEEC---CS-S--------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcEEEEC---CC-c--------CHHHHHHHHHHHhCCCCEEEEEecc
Confidence 79999885 42 1 0136999999999999999887643
No 249
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.13 E-value=2.8e-11 Score=109.19 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=71.6
Q ss_pred CceEEEEcCc------ccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC
Q 025492 66 KIQFADIGCG------FGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG------~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~ 138 (252)
...||||||| +|..++.+++. +|+..++|||+|+.|. . ..+|+.|+++|+.+ ++ +
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~------~~~rI~fv~GDa~d-lp--f 278 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------V------DELRIRTIQGDQND-AE--F 278 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------G------CBTTEEEEECCTTC-HH--H
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------h------cCCCcEEEEecccc-cc--h
Confidence 4589999999 67777777776 5899999999999862 1 34689999999864 33 2
Q ss_pred C------CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 139 E------KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 139 ~------~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
. +++||.|+.+.. .+.. -...+|+++.++|||||.+++.
T Consensus 279 ~~~l~~~d~sFDlVisdgs-H~~~--------d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGS-HINA--------HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECSC-CCHH--------HHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECCc-ccch--------hHHHHHHHHHHhcCCCeEEEEE
Confidence 2 578999987542 1111 1236899999999999999985
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.13 E-value=7.6e-11 Score=103.34 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=70.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEec----CHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-CcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMEL----RDKVTEYVKERILALRVSNPGQYQNISVVRT-NSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDi----s~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-da~~~l~~~~~~ 140 (252)
...|||||||+|.++..+|++ ..|+|||+ ++.+++.+. ....+.+++.++++ |+.. + ++
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~D~~~-l----~~ 146 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--------MSTYGWNLVRLQSGVDVFF-I----PP 146 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--------CCSTTGGGEEEECSCCTTT-S----CC
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--------hhhcCCCCeEEEecccccc-C----Cc
Confidence 458999999999999999998 47999999 554331110 01123478999999 8753 3 35
Q ss_pred CcccEEEEeCCCC--ccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 141 GQLTKMFFLFPDP--HFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 141 ~s~d~i~~~fpdP--~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.++|.|+++++.. .....+. +. ..+|..+.++|||||.|++.+-.
T Consensus 147 ~~fD~V~sd~~~~~g~~~~d~~--~~--l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 147 ERCDTLLCDIGESSPNPTVEAG--RT--LRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSEEEECCCCCCSSHHHHHH--HH--HHHHHHHHHHCCTTCEEEEEESC
T ss_pred CCCCEEEECCccccCcchhhHH--HH--HHHHHHHHHHhCCCCEEEEEeCC
Confidence 6899999976532 1000010 00 13788899999999999987643
No 251
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=8.1e-11 Score=106.76 Aligned_cols=119 Identities=13% Similarity=0.129 Sum_probs=84.7
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.++++|+.. . .+.+.+|
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~-~---~~~~~fD 100 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLL-W---EPGEAFD 100 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGG-C---CCSSCEE
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhh-c---CccCCCC
Confidence 3489999999999999999986 678999999999876433 478999999864 2 2357899
Q ss_pred EEEEeCCCCccccc--------ccccc-------------ccCHHHHHHHHHhhcCCcEEEEEeCch----HHHHHHHHH
Q 025492 145 KMFFLFPDPHFKEK--------NHRRR-------------VISPHLLDEYAYVLGVGGIIYTITDVE----ELGDWMRSC 199 (252)
Q Consensus 145 ~i~~~fpdP~~k~~--------h~krr-------------~~~~~~l~~~~~~LkpgG~l~~~td~~----~~~~~~~~~ 199 (252)
.|+.|.|--..... ...+. -....|++.+.++|+|||.+.+.+... .....+.+.
T Consensus 101 ~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~ 180 (421)
T 2ih2_A 101 LILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREF 180 (421)
T ss_dssp EEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHH
T ss_pred EEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHH
Confidence 99998653221110 00000 012378999999999999999988654 234556666
Q ss_pred HhcC
Q 025492 200 LENH 203 (252)
Q Consensus 200 ~~~~ 203 (252)
+.+.
T Consensus 181 l~~~ 184 (421)
T 2ih2_A 181 LARE 184 (421)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 5544
No 252
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.09 E-value=4.1e-10 Score=101.30 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=73.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
+.+|||||||+|.+++..|+.. ...|+|||.|+ +++.|++++... ++ .+|.++++|+.+ +. + +..+|
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n------~~~~~i~~i~~~~~~-~~--l-pe~~D 151 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFN------GLEDRVHVLPGPVET-VE--L-PEQVD 151 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHT------TCTTTEEEEESCTTT-CC--C-SSCEE
T ss_pred CCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHc------CCCceEEEEeeeeee-ec--C-Ccccc
Confidence 4589999999999988777764 35799999996 778888776553 55 469999999874 43 3 46799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.|+...-+-.. ... -..+.++....++|||||.++.
T Consensus 152 vivsE~~~~~l---~~e--~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 152 AIVSEWMGYGL---LHE--SMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EEECCCCBTTB---TTT--CSHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeecccccc---ccc--chhhhHHHHHHhhCCCCceECC
Confidence 98863221110 000 0224688888899999998753
No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.07 E-value=9.4e-11 Score=111.01 Aligned_cols=100 Identities=12% Similarity=0.121 Sum_probs=75.9
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKMF 147 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i~ 147 (252)
.|||||||.|.++..||+. +..|+|||+++.+|+.|+....+ .+..||.|.++++.+ +...+.+++||.|+
T Consensus 69 ~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~------~~~~~~~~~~~~~~~-~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 69 NVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEE------NPDFAAEFRVGRIEE-VIAALEEGEFDLAI 139 (569)
T ss_dssp EEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHT------STTSEEEEEECCHHH-HHHHCCTTSCSEEE
T ss_pred eEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHh------cCCCceEEEECCHHH-HhhhccCCCccEEE
Confidence 7999999999999999998 77999999999999999876543 355689999999975 43335678999998
Q ss_pred EeC-----CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 148 FLF-----PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 148 ~~f-----pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..- +||- .-..+..+.+.|.++|..++.+
T Consensus 140 ~~e~~ehv~~~~-----------~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 140 GLSVFHHIVHLH-----------GIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EESCHHHHHHHH-----------CHHHHHHHHHHHHHHSSEEEEE
T ss_pred ECcchhcCCCHH-----------HHHHHHHHHHHhccccceeeEE
Confidence 752 3321 0123445667788888776655
No 254
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.05 E-value=4.1e-10 Score=100.33 Aligned_cols=97 Identities=15% Similarity=0.281 Sum_probs=73.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++++|+..++++|+ +.+++.|+ ..+++.++.+|+.+ + ++ .+|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~~v~~~~~d~~~--~--~~--~~D~ 254 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT------------GNENLNFVGGDMFK--S--IP--SADA 254 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC------------CCSSEEEEECCTTT--C--CC--CCSE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc------------cCCCcEEEeCccCC--C--CC--CceE
Confidence 35899999999999999999999999999999 67664332 24679999999763 2 33 4899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcC---CcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV---GGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp---gG~l~~~t 187 (252)
|++...-.+.... ....+|+++.++|+| ||+|++..
T Consensus 255 v~~~~vlh~~~d~------~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 255 VLLKWVLHDWNDE------QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEESCGGGSCHH------HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEEcccccCCCHH------HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9987543221110 012699999999999 99999864
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.05 E-value=1.2e-09 Score=95.25 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=62.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||+|.++..+++. ...++|||+++.+++.+++++. +.+|+.++++|+.. ++ +++..+|.
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~--------~~~~v~vi~gD~l~-~~--~~~~~fD~ 117 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE--------LYNNIEIIWGDALK-VD--LNKLDFNK 117 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH--------HCSSEEEEESCTTT-SC--GGGSCCSE
T ss_pred cCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc--------cCCCeEEEECchhh-CC--cccCCccE
Confidence 458999999999999999998 5789999999999999988764 24689999999874 33 45567999
Q ss_pred EEEeCCCC
Q 025492 146 MFFLFPDP 153 (252)
Q Consensus 146 i~~~fpdP 153 (252)
|+.|.|--
T Consensus 118 Iv~NlPy~ 125 (295)
T 3gru_A 118 VVANLPYQ 125 (295)
T ss_dssp EEEECCGG
T ss_pred EEEeCccc
Confidence 99997643
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.04 E-value=4.1e-10 Score=103.53 Aligned_cols=115 Identities=14% Similarity=0.170 Sum_probs=82.4
Q ss_pred CceEEEEcCcccHHHHHHHHHC-------------CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc--cEEEEeCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-------------PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ--NISVVRTNS 130 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-------------p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~--nv~~~~~da 130 (252)
...|||+|||+|.+++.+++.. +..+++|+|+++.+++.|+.++... +.. ++.+.++|+
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~------g~~~~~~~i~~gD~ 245 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH------GIGTDRSPIVCEDS 245 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT------TCCSSCCSEEECCT
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh------CCCcCCCCEeeCCC
Confidence 4589999999999999998763 3468999999999999998776542 443 678899997
Q ss_pred ccccCccCCCCcccEEEEeCCCCcccccc---ccccc------cCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 131 MKYIPNYFEKGQLTKMFFLFPDPHFKEKN---HRRRV------ISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 131 ~~~l~~~~~~~s~d~i~~~fpdP~~k~~h---~krr~------~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
.. .+ ....+|.|+.|.|--...... .+..+ ....|++.+.+.|+|||++.+++...
T Consensus 246 l~-~~---~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 246 LE-KE---PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp TT-SC---CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CC-Cc---ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 53 22 134899999987632111100 00000 12379999999999999999988653
No 257
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.03 E-value=2.7e-10 Score=99.61 Aligned_cols=78 Identities=13% Similarity=0.252 Sum_probs=63.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC---Cc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK---GQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~---~s 142 (252)
...|||+|||+|.++..+++..|+..++|+|+|+.|++.|++++... + .|+.++++|+.+ ++..+.. ..
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~------g-~~v~~v~~d~~~-l~~~l~~~g~~~ 98 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF------S-DRVSLFKVSYRE-ADFLLKTLGIEK 98 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG------T-TTEEEEECCGGG-HHHHHHHTTCSC
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc------C-CcEEEEECCHHH-HHHHHHhcCCCC
Confidence 45899999999999999999998889999999999999998876432 3 689999999864 4322222 57
Q ss_pred ccEEEEeCC
Q 025492 143 LTKMFFLFP 151 (252)
Q Consensus 143 ~d~i~~~fp 151 (252)
+|.|+++.|
T Consensus 99 ~D~Vl~D~g 107 (301)
T 1m6y_A 99 VDGILMDLG 107 (301)
T ss_dssp EEEEEEECS
T ss_pred CCEEEEcCc
Confidence 999998765
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.00 E-value=1.1e-09 Score=93.62 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=58.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc-cCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY-IPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~-l~~~~~~~s~d 144 (252)
...|||||||+|.++..+++.. ..++|||+++.|++.+++++. ..+|+.++++|+.+. ++..+....+|
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~--------~~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYN--------QQKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHT--------TCTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred cCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHh--------hCCCcEEEEcchHhCCHHHhccCCCeE
Confidence 4589999999999999999984 689999999999999887652 256899999999742 22222234576
Q ss_pred EEEEeCC
Q 025492 145 KMFFLFP 151 (252)
Q Consensus 145 ~i~~~fp 151 (252)
|+.|.|
T Consensus 100 -vv~NlP 105 (255)
T 3tqs_A 100 -VVGNLP 105 (255)
T ss_dssp -EEEECC
T ss_pred -EEecCC
Confidence 777875
No 259
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.98 E-value=1.1e-09 Score=95.29 Aligned_cols=113 Identities=15% Similarity=0.184 Sum_probs=74.9
Q ss_pred CceEEEEcCcc------cHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEE-EeCCcccccCcc
Q 025492 66 KIQFADIGCGF------GGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISV-VRTNSMKYIPNY 137 (252)
Q Consensus 66 ~~~vLDIGcG~------G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~-~~~da~~~l~~~ 137 (252)
...|||||||+ |. ..+++..+ +..++|+|+++. ++|+.+ +++|+.+ ++
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------------v~~v~~~i~gD~~~-~~-- 119 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------------VSDADSTLIGDCAT-VH-- 119 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------------BCSSSEEEESCGGG-CC--
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------------CCCCEEEEECcccc-CC--
Confidence 56899999944 76 55566666 689999999986 136888 9999864 32
Q ss_pred CCCCcccEEEEeCCCCccccc---cccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcC
Q 025492 138 FEKGQLTKMFFLFPDPHFKEK---NHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENH 203 (252)
Q Consensus 138 ~~~~s~d~i~~~fpdP~~k~~---h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 203 (252)
+ ++++|.|+.+.+.++.... +....-....+++++.++|||||.|++..-.......+.+.+...
T Consensus 120 ~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~ 187 (290)
T 2xyq_A 120 T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF 187 (290)
T ss_dssp C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE
T ss_pred c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc
Confidence 2 3689999998765542111 111111224789999999999999999653222223455555544
No 260
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.97 E-value=7.4e-10 Score=88.44 Aligned_cols=108 Identities=15% Similarity=0.052 Sum_probs=76.4
Q ss_pred CCCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc-cCCCC
Q 025492 63 CSKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN-YFEKG 141 (252)
Q Consensus 63 ~~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~-~~~~~ 141 (252)
++++..|||||||. +++|+|+.|++.|+++. ..++.++++|+.. ++. .++++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~----------~~~~~~~~~d~~~-~~~~~~~~~ 62 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALT----------GNEGRVSVENIKQ-LLQSAHKES 62 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHT----------TTTSEEEEEEGGG-GGGGCCCSS
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhc----------ccCcEEEEechhc-CccccCCCC
Confidence 34567999999996 24999999999887653 1258999999874 441 13688
Q ss_pred cccEEEEeCCCCcc-ccccccccccCHHHHHHHHHhhcCCcEEEEEeCchH------H---HHHHHHHHhcCCC
Q 025492 142 QLTKMFFLFPDPHF-KEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEE------L---GDWMRSCLENHPM 205 (252)
Q Consensus 142 s~d~i~~~fpdP~~-k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~------~---~~~~~~~~~~~~~ 205 (252)
++|.|+.++.-.|. .. ...++++++++|||||.|++...... + .+.+.+.+...++
T Consensus 63 ~fD~V~~~~~l~~~~~~--------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLH--------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CEEEEEECCSTTCCCCC--------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CEeEEEECChhhhcccC--------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 99999987654443 11 24699999999999999999643211 0 3455666766664
No 261
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.97 E-value=4.9e-09 Score=91.02 Aligned_cols=115 Identities=12% Similarity=0.168 Sum_probs=94.2
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..||=||-|.|..+..+++..+...++.|||++..++.|++-+..... ....-++++++.+|+...+.. ..+.+|.|
T Consensus 85 k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~--~~~~yDvI 161 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQ--TSQTFDVI 161 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSC--SSCCEEEE
T ss_pred CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhh--ccccCCEE
Confidence 479999999999999999987778999999999999999876544210 111346899999999887753 46789999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
++..+||+-. ...+.+.+|++.+.+.|+|||.++..+.
T Consensus 162 i~D~~dp~~~----~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 162 ISDCTDPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EESCCCCCCT----TCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCCCcCCC----chhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 9999998743 2457788999999999999999999764
No 262
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.96 E-value=7.2e-10 Score=94.45 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=78.4
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
..|||||||.|-+++.++...|...|+|+|+++.|++.++.++..+ +.. ..+...|... ..+++.+|.+
T Consensus 134 ~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~------g~~-~~~~v~D~~~----~~p~~~~Dva 202 (281)
T 3lcv_B 134 NTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL------NVP-HRTNVADLLE----DRLDEPADVT 202 (281)
T ss_dssp SEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT------TCC-EEEEECCTTT----SCCCSCCSEE
T ss_pred ceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc------CCC-ceEEEeeecc----cCCCCCcchH
Confidence 4899999999999999999999999999999999999999988664 554 7888888642 2357889999
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.++-.-|.-... .+ ...+ .+...|+++|.++-
T Consensus 203 L~lkti~~Le~q-~k-----g~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 203 LLLKTLPCLETQ-QR-----GSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp EETTCHHHHHHH-ST-----THHH-HHHHHSSCSEEEEE
T ss_pred HHHHHHHHhhhh-hh-----HHHH-HHHHHhCCCCEEEe
Confidence 887544432211 11 1344 78999999998764
No 263
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=4.1e-10 Score=96.37 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=63.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCH-------hHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRD-------KVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNY 137 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~-------~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~ 137 (252)
...|||+|||+|.+++.+|.. +..|+|+|+++ .+++.|++++... ++.| +.++++|+.+.++.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~------~~~~ri~~~~~d~~~~l~~- 154 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQ------DTAARINLHFGNAAEQMPA- 154 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHH------HHHTTEEEEESCHHHHHHH-
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhh------CCccCeEEEECCHHHHHHh-
Confidence 458999999999999999997 57899999999 9998888776543 4555 99999999764432
Q ss_pred CCC--CcccEEEEeCCCCc
Q 025492 138 FEK--GQLTKMFFLFPDPH 154 (252)
Q Consensus 138 ~~~--~s~d~i~~~fpdP~ 154 (252)
+++ +++|.|+++.+-|+
T Consensus 155 ~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 155 LVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHCCCSEEEECCCC--
T ss_pred hhccCCCccEEEECCCCCC
Confidence 333 68999999765544
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.94 E-value=7.2e-09 Score=100.35 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=82.6
Q ss_pred CceEEEEcCcccHHHHHHHHHC------------------------------------------CCCeEEEEecCHhHHH
Q 025492 66 KIQFADIGCGFGGLLISLSTLF------------------------------------------PEVLMIGMELRDKVTE 103 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~------------------------------------------p~~~~iGiDis~~~i~ 103 (252)
...+||.+||+|.+++..|... +...++|+|+++.+++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 4579999999999999988752 2357999999999999
Q ss_pred HHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHH---HHhhcC
Q 025492 104 YVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEY---AYVLGV 179 (252)
Q Consensus 104 ~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~---~~~Lkp 179 (252)
.|+.|+... ++.+ +.|.++|+.+ +......+++|.|+.|.|=- .+..... ....+.+.+ .+.+.|
T Consensus 271 ~A~~N~~~a------gv~~~i~~~~~D~~~-~~~~~~~~~~d~Iv~NPPYG---~Rlg~~~-~l~~ly~~l~~~lk~~~~ 339 (703)
T 3v97_A 271 RARTNARLA------GIGELITFEVKDVAQ-LTNPLPKGPYGTVLSNPPYG---ERLDSEP-ALIALHSLLGRIMKNQFG 339 (703)
T ss_dssp HHHHHHHHT------TCGGGEEEEECCGGG-CCCSCTTCCCCEEEECCCCC---C---CCH-HHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHc------CCCCceEEEECChhh-CccccccCCCCEEEeCCCcc---ccccchh-HHHHHHHHHHHHHHhhCC
Confidence 999988764 6665 9999999975 43223334899999986532 1111000 012234434 444558
Q ss_pred CcEEEEEeCchHHHH
Q 025492 180 GGIIYTITDVEELGD 194 (252)
Q Consensus 180 gG~l~~~td~~~~~~ 194 (252)
||.+++.|.+.++..
T Consensus 340 g~~~~ilt~~~~l~~ 354 (703)
T 3v97_A 340 GWNLSLFSASPDLLS 354 (703)
T ss_dssp TCEEEEEESCHHHHH
T ss_pred CCeEEEEeCCHHHHH
Confidence 999999998877654
No 265
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.93 E-value=1.5e-11 Score=104.17 Aligned_cols=108 Identities=17% Similarity=0.207 Sum_probs=73.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC-CCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE-KGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~-~~s~d 144 (252)
...|||||||+|.++..+++.. ..++|+|+++.+++.|++++ ...+|+.++++|+.+ ++ ++ ++++
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~--------~~~~~v~~~~~D~~~-~~--~~~~~~f- 95 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKL--------KLNTRVTLIHQDILQ-FQ--FPNKQRY- 95 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTT--------TTCSEEEECCSCCTT-TT--CCCSSEE-
T ss_pred CCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHh--------ccCCceEEEECChhh-cC--cccCCCc-
Confidence 4589999999999999999994 78999999999987765433 134689999999874 43 33 3577
Q ss_pred EEEEeCCCCcccc--ccc-cccccCHHHH----HHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKE--KNH-RRRVISPHLL----DEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~--~h~-krr~~~~~~l----~~~~~~LkpgG~l~~~t 187 (252)
.|+.|.|--.... .+. .+......++ +.+.++|+|||.+.+.+
T Consensus 96 ~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 96 KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 7777765322100 000 0000111234 67899999999887755
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.92 E-value=5.3e-09 Score=88.21 Aligned_cols=99 Identities=8% Similarity=0.086 Sum_probs=72.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||.|.+++.++ +...|+|+||++.+++.+++++... + .++.+..+|... . .+++++|.
T Consensus 106 p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~------g-~~~~~~v~D~~~--~--~~~~~~Dv 171 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK------D-WDFTFALQDVLC--A--PPAEAGDL 171 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT------T-CEEEEEECCTTT--S--CCCCBCSE
T ss_pred CCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc------C-CCceEEEeeccc--C--CCCCCcch
Confidence 3489999999999998877 7889999999999999999886542 3 678999999752 1 24669999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
|.++-.-|.-. +.. ....+ .+...|+++|.++-
T Consensus 172 vLllk~lh~LE--~q~----~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 172 ALIFKLLPLLE--REQ----AGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp EEEESCHHHHH--HHS----TTHHH-HHHHHCBCSEEEEE
T ss_pred HHHHHHHHHhh--hhc----hhhHH-HHHHHhcCCCEEEE
Confidence 98874322211 111 11233 77779999987654
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.91 E-value=1.3e-08 Score=86.04 Aligned_cols=73 Identities=19% Similarity=0.366 Sum_probs=57.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC-Cccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK-GQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~-~s~d 144 (252)
...|||||||+|.++..+++.. ..++|||+++.+++.+++++. ..+|+.++++|+.. ++ +++ ..+
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~--------~~~~v~~~~~D~~~-~~--~~~~~~~- 96 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLV--------DHDNFQVLNKDILQ-FK--FPKNQSY- 96 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTT--------TCCSEEEECCCGGG-CC--CCSSCCC-
T ss_pred CCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhc--------cCCCeEEEEChHHh-CC--cccCCCe-
Confidence 4589999999999999999995 789999999999998876542 24689999999874 43 332 344
Q ss_pred EEEEeCCC
Q 025492 145 KMFFLFPD 152 (252)
Q Consensus 145 ~i~~~fpd 152 (252)
.|+.|.|-
T Consensus 97 ~vv~nlPy 104 (244)
T 1qam_A 97 KIFGNIPY 104 (244)
T ss_dssp EEEEECCG
T ss_pred EEEEeCCc
Confidence 57777653
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.88 E-value=4.2e-09 Score=90.76 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=57.6
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC-CcccEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK-GQLTKM 146 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~-~s~d~i 146 (252)
.|||||||+|.++..+++.. ..++|||+++.+++.+++++ ...|+.++++|+.. ++ +++ ...|.|
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~---------~~~~v~vi~~D~l~-~~--~~~~~~~~~i 114 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETL---------SGLPVRLVFQDALL-YP--WEEVPQGSLL 114 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHT---------TTSSEEEEESCGGG-SC--GGGSCTTEEE
T ss_pred eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhc---------CCCCEEEEECChhh-CC--hhhccCccEE
Confidence 89999999999999999984 68999999999999887654 12589999999874 43 222 257889
Q ss_pred EEeCCC
Q 025492 147 FFLFPD 152 (252)
Q Consensus 147 ~~~fpd 152 (252)
+.|.|-
T Consensus 115 v~NlPy 120 (271)
T 3fut_A 115 VANLPY 120 (271)
T ss_dssp EEEECS
T ss_pred EecCcc
Confidence 988764
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.88 E-value=6.7e-09 Score=88.82 Aligned_cols=119 Identities=13% Similarity=0.101 Sum_probs=77.9
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhc-CCCC-c-ccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVS-NPGQ-Y-QNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~-~~~~-~-~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
..|||+|||+|..++.+|.+ ++.|+|||+++.+++.++.++...+.. ..++ + .|+.++++|+.+.+.. ++ ..+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~-~~-~~f 165 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD-IT-PRP 165 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT-CS-SCC
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh-Cc-ccC
Confidence 68999999999999999998 568999999999888887776654321 1122 3 6899999999876653 33 369
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHH
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCL 200 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~ 200 (252)
|.|+++.|-|+.. ....++...++|++.+- -..|...+.+++....
T Consensus 166 DvV~lDP~y~~~~---------~saavkk~~~~lr~l~~--~~~~~~~ll~~a~~~a 211 (258)
T 2oyr_A 166 QVVYLDPMFPHKQ---------KSALVKKEMRVFQSLVG--PDLDADGLLEPARLLA 211 (258)
T ss_dssp SEEEECCCCCCCC---------C-----HHHHHHHHHSC--CCTTGGGGHHHHHHHC
T ss_pred CEEEEcCCCCCcc---------cchHHHHHHHHHHHhhc--CCccHHHHHHHHHHhc
Confidence 9999976555432 11345555566655431 0233444555554443
No 270
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.86 E-value=3.8e-09 Score=95.89 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=62.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
+..|||+|||+|..++.+|+. ...++|||+++.+++.|+.++... ..++.|+.++++|+.+.++. +..+.+|.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~----~~gl~~i~~i~~Da~~~L~~-~~~~~fDv 166 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLL----LNEGKDVNILTGDFKEYLPL-IKTFHPDY 166 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHH----SCTTCEEEEEESCGGGSHHH-HHHHCCSE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHh----ccCCCcEEEEECcHHHhhhh-ccCCCceE
Confidence 458999999999999999988 568999999999999999987653 01457899999999764432 22357999
Q ss_pred EEEeC
Q 025492 146 MFFLF 150 (252)
Q Consensus 146 i~~~f 150 (252)
|+++.
T Consensus 167 V~lDP 171 (410)
T 3ll7_A 167 IYVDP 171 (410)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99854
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.84 E-value=4.4e-09 Score=98.99 Aligned_cols=119 Identities=15% Similarity=0.073 Sum_probs=82.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCC------------------CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-----
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP------------------EVLMIGMELRDKVTEYVKERILALRVSNPGQYQN----- 122 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p------------------~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n----- 122 (252)
...|||.|||+|.+++.+++... ..+++|+|+++.+++.|+.++.. .+..+
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l------~gi~~~~~~~ 243 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL------HDIEGNLDHG 243 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT------TTCCCBGGGT
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH------hCCCcccccc
Confidence 45899999999999999887521 24799999999999999876643 25554
Q ss_pred EEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccc------cccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 123 ISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRR------RVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 123 v~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~kr------r~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
+.+.++|+... .......+|.|+.|.|--.......+. .-....|+..+.+.|+|||++.+++.+..+
T Consensus 244 ~~I~~gDtL~~--~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L 317 (541)
T 2ar0_A 244 GAIRLGNTLGS--DGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVL 317 (541)
T ss_dssp BSEEESCTTSH--HHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHH
T ss_pred CCeEeCCCccc--ccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcce
Confidence 78889997531 113356899999997632211100000 001236999999999999999998876533
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.83 E-value=2.6e-08 Score=82.05 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=73.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC---cccEEEEeCCcccc---------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ---YQNISVVRTNSMKY--------- 133 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~---~~nv~~~~~da~~~--------- 133 (252)
...||||||| ..++.+|+. ++..++.||.+++..+.|++++... + .+||.++.+|+.+.
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~------g~~~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAAN------PPAEGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHS------CCCTTCEEEEEECCCSSBCGGGCBSSS
T ss_pred CCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHc------CCCCCCceEEEEeCchhhhcccccccc
Confidence 3489999995 688888885 4789999999999999999888764 4 46899999997543
Q ss_pred -----cCcc------C-CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 134 -----IPNY------F-EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 134 -----l~~~------~-~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
++.+ + ..+.+|.|++.-. |+ ...+..+.+.|+|||+|++
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~---------k~----~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDGR---------FR----VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECSS---------SH----HHHHHHHHHHCSSCEEEEE
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeCC---------Cc----hhHHHHHHHhcCCCeEEEE
Confidence 2211 1 2378999999641 11 1466677799999999954
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=1.7e-08 Score=87.22 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=56.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC--CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC--ccCCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE--VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP--NYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~--~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~--~~~~~~ 141 (252)
...|||||||+|.++..|++..+. ..++|||+++.|++.++++. ..|+.++++|+.. ++ ..+++.
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----------~~~v~~i~~D~~~-~~~~~~~~~~ 111 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----------GELLELHAGDALT-FDFGSIARPG 111 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----------GGGEEEEESCGGG-CCGGGGSCSS
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----------CCCcEEEECChhc-CChhHhcccc
Confidence 458999999999999999998542 45999999999999887652 3589999999974 32 222111
Q ss_pred --cccEEEEeCC
Q 025492 142 --QLTKMFFLFP 151 (252)
Q Consensus 142 --s~d~i~~~fp 151 (252)
.-..|+.|.|
T Consensus 112 ~~~~~~vv~NlP 123 (279)
T 3uzu_A 112 DEPSLRIIGNLP 123 (279)
T ss_dssp SSCCEEEEEECC
T ss_pred cCCceEEEEccC
Confidence 2346777765
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.79 E-value=4.9e-08 Score=91.74 Aligned_cols=134 Identities=15% Similarity=0.116 Sum_probs=93.7
Q ss_pred CceEEEEcCcccHHHHHHHHHC---CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc--ccEEEEeCCcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLF---PEVLMIGMELRDKVTEYVKERILALRVSNPGQY--QNISVVRTNSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~---p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~--~nv~~~~~da~~~l~~~~~~ 140 (252)
...|||.+||+|.+++.+++.. +...++|+|+++.++..|+.++... +. +++.+.++|....-......
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~------gi~~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH------GVPIENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT------TCCGGGEEEEESCTTTSCSCCSSC
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc------CCCcCccceEecceeccccccccc
Confidence 4589999999999999999884 3578999999999999998776442 55 68999999975310012446
Q ss_pred CcccEEEEeCCCC--cccccc--ccccc-----------cCHHHHHHHHHhhc-CCcEEEEEeCchHHH-----HHHHHH
Q 025492 141 GQLTKMFFLFPDP--HFKEKN--HRRRV-----------ISPHLLDEYAYVLG-VGGIIYTITDVEELG-----DWMRSC 199 (252)
Q Consensus 141 ~s~d~i~~~fpdP--~~k~~h--~krr~-----------~~~~~l~~~~~~Lk-pgG~l~~~td~~~~~-----~~~~~~ 199 (252)
..+|.|+.|.|-- |..... ...|. ..-.|+..+.+.|+ +||++.+++.+..++ ..+.+.
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~ 375 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKA 375 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHH
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHH
Confidence 7899999997732 311100 01111 11248999999999 999999998765543 345555
Q ss_pred HhcCCC
Q 025492 200 LENHPM 205 (252)
Q Consensus 200 ~~~~~~ 205 (252)
+.+...
T Consensus 376 Lle~~~ 381 (542)
T 3lkd_A 376 LLEEGA 381 (542)
T ss_dssp HHHTTC
T ss_pred HHhCCc
Confidence 554443
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.76 E-value=4.5e-08 Score=94.85 Aligned_cols=136 Identities=14% Similarity=0.107 Sum_probs=87.9
Q ss_pred CceEEEEcCcccHHHHHHHHHCC---CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP---EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p---~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
...|||.|||+|.+++.++...+ ...++|+|+++.+++.|+.+..........+..+..+...|+.. . .......
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~-~-~~~~~~k 399 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCS-L-NPEDFAN 399 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGG-C-CGGGGTT
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhc-c-cccccCC
Confidence 45899999999999999999865 35799999999999888433221100011244444555555542 1 2234578
Q ss_pred ccEEEEeCCCC--ccccc---cccc----------------cccCHHHHHHHHHhhcCCcEEEEEeCchHH------HHH
Q 025492 143 LTKMFFLFPDP--HFKEK---NHRR----------------RVISPHLLDEYAYVLGVGGIIYTITDVEEL------GDW 195 (252)
Q Consensus 143 ~d~i~~~fpdP--~~k~~---h~kr----------------r~~~~~~l~~~~~~LkpgG~l~~~td~~~~------~~~ 195 (252)
+|.|+.|.|-- +.... .... .-+...|++.+.+.|++||++.+.+....+ ...
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 99999997641 11000 0000 012356899999999999999999987655 345
Q ss_pred HHHHHhcC
Q 025492 196 MRSCLENH 203 (252)
Q Consensus 196 ~~~~~~~~ 203 (252)
+.+.+...
T Consensus 480 LRk~LLe~ 487 (878)
T 3s1s_A 480 FREFLVGN 487 (878)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHhC
Confidence 56655544
No 276
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.75 E-value=6.9e-08 Score=86.27 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=96.8
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
++..|||+++|.|.=+..||...+...++++|+++..+...++++............|+.+...|+.. +.. ...+.||
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~-~~~-~~~~~fD 225 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK-WGE-LEGDTYD 225 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGG-HHH-HSTTCEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhh-cch-hccccCC
Confidence 45699999999999999999998777899999999999888888766511111223689999999874 332 3467899
Q ss_pred EEEEeCCCCc----ccccc--cccc----------ccCHHHHHHHHHhhcCCcEEEEEe------CchHHHHHHHHHHhc
Q 025492 145 KMFFLFPDPH----FKEKN--HRRR----------VISPHLLDEYAYVLGVGGIIYTIT------DVEELGDWMRSCLEN 202 (252)
Q Consensus 145 ~i~~~fpdP~----~k~~h--~krr----------~~~~~~l~~~~~~LkpgG~l~~~t------d~~~~~~~~~~~~~~ 202 (252)
.|.+.-|.-- ...++ .+++ .++..+|....+.|||||+|+-+| .|+...+++++...+
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 9999876321 10111 0010 145679999999999999999876 355666666655543
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.66 E-value=1.7e-08 Score=85.93 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=53.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC--ccCC-CCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP--NYFE-KGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~--~~~~-~~s 142 (252)
...|||||||+|.++. ++ ..+...++|||+++.|++.+++++ ...+|+.++++|+.. ++ ..+. ++.
T Consensus 22 ~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~--------~~~~~v~~i~~D~~~-~~~~~~~~~~~~ 90 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHP--------FLGPKLTIYQQDAMT-FNFGELAEKMGQ 90 (252)
T ss_dssp TCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCT--------TTGGGEEEECSCGGG-CCHHHHHHHHTS
T ss_pred cCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHh--------ccCCceEEEECchhh-CCHHHhhcccCC
Confidence 4589999999999999 65 433333999999999998877543 124689999999874 32 1110 123
Q ss_pred ccEEEEeCC
Q 025492 143 LTKMFFLFP 151 (252)
Q Consensus 143 ~d~i~~~fp 151 (252)
.+.|+.|.|
T Consensus 91 ~~~vvsNlP 99 (252)
T 1qyr_A 91 PLRVFGNLP 99 (252)
T ss_dssp CEEEEEECC
T ss_pred ceEEEECCC
Confidence 467888876
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.66 E-value=5.1e-08 Score=82.83 Aligned_cols=72 Identities=24% Similarity=0.319 Sum_probs=54.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC--Ccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK--GQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~--~s~ 143 (252)
...|||||||+|.++..+++. +...++|||+++.+++.++++ ...|+.++++|+.. ++ +++ +.+
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----------~~~~v~~i~~D~~~-~~--~~~~~~~~ 97 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----------GDERLEVINEDASK-FP--FCSLGKEL 97 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----------CCTTEEEECSCTTT-CC--GGGSCSSE
T ss_pred cCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----------cCCCeEEEEcchhh-CC--hhHccCCc
Confidence 458999999999999999998 457899999999999876542 24589999999874 33 221 123
Q ss_pred cEEEEeCCC
Q 025492 144 TKMFFLFPD 152 (252)
Q Consensus 144 d~i~~~fpd 152 (252)
.|+.|.|-
T Consensus 98 -~vv~NlPy 105 (249)
T 3ftd_A 98 -KVVGNLPY 105 (249)
T ss_dssp -EEEEECCT
T ss_pred -EEEEECch
Confidence 67777764
No 279
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.63 E-value=4.5e-08 Score=92.08 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=87.9
Q ss_pred ceEEEEcCcccHHHHHHHHHCC---------------CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCc
Q 025492 67 IQFADIGCGFGGLLISLSTLFP---------------EVLMIGMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNS 130 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p---------------~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da 130 (252)
..|||.+||+|.+++.+++... ..+++|+|+++.+++.|+.++... ++. ++.+.++|.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~------gi~~~i~i~~gDt 319 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR------GIDFNFGKKNADS 319 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT------TCCCBCCSSSCCT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh------CCCcccceeccch
Confidence 3899999999999998865421 468999999999999998776442 332 444477886
Q ss_pred ccccCccCCCCcccEEEEeCCCC---cccccc-cccc------------c-----cCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 131 MKYIPNYFEKGQLTKMFFLFPDP---HFKEKN-HRRR------------V-----ISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 131 ~~~l~~~~~~~s~d~i~~~fpdP---~~k~~h-~krr------------~-----~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.. ...+....+|.|+.|.|-- |..... ...| + ..-.|++.+.+.|+|||++.+++.+
T Consensus 320 L~--~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 320 FL--DDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TT--SCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred hc--CcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 42 2234567899999997733 221100 0001 0 1125999999999999999998865
Q ss_pred hHH------HHHHHHHHhcCCCc
Q 025492 190 EEL------GDWMRSCLENHPMF 206 (252)
Q Consensus 190 ~~~------~~~~~~~~~~~~~~ 206 (252)
-.+ ...+.+.+.....+
T Consensus 398 g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 398 GSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp HHHHCCGGGHHHHHHHHHHTTCE
T ss_pred hhhhcCcchHHHHHHHHHhCCcH
Confidence 433 23455555544433
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.53 E-value=2.5e-07 Score=79.93 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=78.0
Q ss_pred ceEEEEcCcccHHHHHHHHHC-----CCCeEEEEecCHh--------------------------HHHHHHHHHHHHhhc
Q 025492 67 IQFADIGCGFGGLLISLSTLF-----PEVLMIGMELRDK--------------------------VTEYVKERILALRVS 115 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~-----p~~~~iGiDis~~--------------------------~i~~a~~~~~~~~~~ 115 (252)
..||||||..|..++.+|... ++..++++|..+. .++.+++++...
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~--- 184 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY--- 184 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT---
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc---
Confidence 489999999999999998764 4788999996421 355677777654
Q ss_pred CCCCc--ccEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 116 NPGQY--QNISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 116 ~~~~~--~nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
++ ++|.++.+|+.+.|+. ++.+.+|.|++.. | +.. . ...+++.+...|+|||.|++
T Consensus 185 ---gl~~~~I~li~Gda~etL~~-~~~~~~d~vfIDa-D-~y~--~------~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 ---DLLDEQVRFLPGWFKDTLPT-APIDTLAVLRMDG-D-LYE--S------TWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp ---TCCSTTEEEEESCHHHHSTT-CCCCCEEEEEECC-C-SHH--H------HHHHHHHHGGGEEEEEEEEE
T ss_pred ---CCCcCceEEEEeCHHHHHhh-CCCCCEEEEEEcC-C-ccc--c------HHHHHHHHHhhcCCCEEEEE
Confidence 55 7899999999988875 4567899999875 2 110 0 12589999999999998876
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.49 E-value=3.3e-07 Score=82.00 Aligned_cols=126 Identities=15% Similarity=0.133 Sum_probs=88.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhh--cCCCCcccEEEEeCCcccccCccC-CCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRV--SNPGQYQNISVVRTNSMKYIPNYF-EKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~--~~~~~~~nv~~~~~da~~~l~~~~-~~~s 142 (252)
...||=||-|.|..+..+.+. |...++.|||++.+++.|++.+...-. ......++++++.+|+...+.... ..+.
T Consensus 206 pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 358999999999999999875 557899999999999998875421100 011112469999999987664322 2457
Q ss_pred ccEEEEeCCCCcccc--ccccccccCHHHHHHHHHhhcCCcEEEEEeCchHH
Q 025492 143 LTKMFFLFPDPHFKE--KNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEEL 192 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~--~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 192 (252)
+|.|++..+|+.... .+....+.+..|++.+.+.|+|||.++.++.+..+
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~ 336 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 336 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcc
Confidence 999999987765321 11122345668999999999999999987765433
No 282
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.40 E-value=5.1e-06 Score=74.67 Aligned_cols=174 Identities=14% Similarity=0.094 Sum_probs=99.0
Q ss_pred ceEEEEcCcccHHHHHHHHH-----------------CCCCeEEEEecCHhHHHHHHHHHHH----HhhcCCCCcccEEE
Q 025492 67 IQFADIGCGFGGLLISLSTL-----------------FPEVLMIGMELRDKVTEYVKERILA----LRVSNPGQYQNISV 125 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~-----------------~p~~~~iGiDis~~~i~~a~~~~~~----~~~~~~~~~~nv~~ 125 (252)
-.|+|+|||+|..++.+... .|+..|+.-|+-.+=....-+.+.. .+... ....+-.|
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-g~~~~~~f 132 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-GRKIGSCL 132 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT-CCCTTSEE
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc-cCCCCceE
Confidence 47999999999999887776 4678899999873211111111110 00001 11123466
Q ss_pred EeCCcccccCccCCCCcccEEEEeCCCCcccccccc-----------ccc---------c-----------CHHHHHHHH
Q 025492 126 VRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHR-----------RRV---------I-----------SPHLLDEYA 174 (252)
Q Consensus 126 ~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~k-----------rr~---------~-----------~~~~l~~~~ 174 (252)
+.+...-+-...|+++++|.|+.++.-.|..+.-.. .++ + -..||+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 676665445567899999999999988885432100 000 0 012467779
Q ss_pred HhhcCCcEEEEEeC---ch--H-----HHHHHHHHHhcCCCcccccccccccCccccCCCCCCHHHHHHHHcC-CCeEEE
Q 025492 175 YVLGVGGIIYTITD---VE--E-----LGDWMRSCLENHPMFEALTKEELEADPVVKLLSSATEEGQKVARNG-GQTFQA 243 (252)
Q Consensus 175 ~~LkpgG~l~~~td---~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~t~~e~~~~~~G-~~i~~~ 243 (252)
+.|+|||++++.+- +. + ....++..+...+.......+.+ ..|. +.....++...+.+.| ..|.++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf-~~P~--y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSF-NVPI--YAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTC-CCSB--CCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhccc-CCcc--cCCCHHHHHHHHHHcCCceEEEE
Confidence 99999999999863 22 2 45555555554443222211111 1232 2234446777777775 467665
Q ss_pred E
Q 025492 244 V 244 (252)
Q Consensus 244 ~ 244 (252)
.
T Consensus 290 e 290 (384)
T 2efj_A 290 E 290 (384)
T ss_dssp E
T ss_pred E
Confidence 4
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.35 E-value=3.3e-06 Score=72.22 Aligned_cols=109 Identities=16% Similarity=0.135 Sum_probs=69.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||.|.++...+++.+...+.|+|+..++... .. .....+ .|+..++.++. .. .+..+.+|.
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~------pi-~~~~~g-~~ii~~~~~~d-v~--~l~~~~~Dl 143 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK------PM-NVQSLG-WNIITFKDKTD-IH--RLEPVKCDT 143 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC------CC-CCCBTT-GGGEEEECSCC-TT--TSCCCCCSE
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc------cc-ccCcCC-CCeEEEeccce-eh--hcCCCCccE
Confidence 458999999999999999988766678888887542100 00 000011 15666677653 22 256778999
Q ss_pred EEEeCCCCccc--cccccccccCHHHHHHHHHhhcCC-cEEEEEeCc
Q 025492 146 MFFLFPDPHFK--EKNHRRRVISPHLLDEYAYVLGVG-GIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k--~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~td~ 189 (252)
|.......-.. ..+. | +..+|+.+.++|+|| |.|+++.-.
T Consensus 144 VlsD~apnsG~~~~D~~--r--s~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGE--R--TVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEECCCCCCSCHHHHHH--H--HHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEecCccCcCchHHHHH--H--HHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99876322100 0111 1 123578889999999 999998755
No 284
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.33 E-value=3.5e-06 Score=75.56 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=74.7
Q ss_pred CceEEEEcCcccHHHHHHH--------HHC-------CCCeEEEEecCHhHHHHHHHHHHHHhh-c-----CCCCcccEE
Q 025492 66 KIQFADIGCGFGGLLISLS--------TLF-------PEVLMIGMELRDKVTEYVKERILALRV-S-----NPGQYQNIS 124 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA--------~~~-------p~~~~iGiDis~~~i~~a~~~~~~~~~-~-----~~~~~~nv~ 124 (252)
.-.|+|+|||+|..++.++ +++ |+.+|+.-|+-.+.....-+.+...+. . ......+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4589999999999998772 222 788899999887765443322211100 0 000000112
Q ss_pred EEeCCcccccCccCCCCcccEEEEeCCCCcccccccc-----------ccc-------------------cCHHHHHHHH
Q 025492 125 VVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHR-----------RRV-------------------ISPHLLDEYA 174 (252)
Q Consensus 125 ~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~k-----------rr~-------------------~~~~~l~~~~ 174 (252)
|+.+...-+-...||++++|.|+.++.-.|..+.-.. .++ --..||+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333233456889999999999988886521100 000 1123788889
Q ss_pred HhhcCCcEEEEEeC
Q 025492 175 YVLGVGGIIYTITD 188 (252)
Q Consensus 175 ~~LkpgG~l~~~td 188 (252)
+.|+|||++++.+-
T Consensus 213 ~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRGGAMFLVCL 226 (374)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEe
Confidence 99999999999763
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.26 E-value=1.3e-06 Score=75.15 Aligned_cols=72 Identities=13% Similarity=0.133 Sum_probs=57.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC---CCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE---KGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~---~~s 142 (252)
..++||.+||.|.++..++++ +..++|+|.++.+++.|++ + . . +++.++++|..+ +...+. .+.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L------~--~-~rv~lv~~~f~~-l~~~L~~~g~~~ 89 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-L------H--L-PGLTVVQGNFRH-LKRHLAALGVER 89 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-T------C--C-TTEEEEESCGGG-HHHHHHHTTCSC
T ss_pred CCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-h------c--c-CCEEEEECCcch-HHHHHHHcCCCC
Confidence 459999999999999999998 6799999999999988765 3 1 2 689999999874 433332 257
Q ss_pred ccEEEEeC
Q 025492 143 LTKMFFLF 150 (252)
Q Consensus 143 ~d~i~~~f 150 (252)
+|.|++..
T Consensus 90 vDgIL~DL 97 (285)
T 1wg8_A 90 VDGILADL 97 (285)
T ss_dssp EEEEEEEC
T ss_pred cCEEEeCC
Confidence 99998753
No 286
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.22 E-value=1.5e-05 Score=71.02 Aligned_cols=170 Identities=14% Similarity=0.100 Sum_probs=103.4
Q ss_pred ceEEEEcCcccHHHHHHHHH----------------CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc
Q 025492 67 IQFADIGCGFGGLLISLSTL----------------FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS 130 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~----------------~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da 130 (252)
-.|+|+||++|..++.+... .|+..++.-|+-.+....+-+.+... . ...+-.|+.+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~---~--~~~~~~f~~gvp 127 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIE---N--DVDGVCFINGVP 127 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTS---C--SCTTCEEEEEEE
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchh---c--ccCCCEEEEecc
Confidence 47999999999877654443 46788999999888766554332211 0 001345666665
Q ss_pred ccccCccCCCCcccEEEEeCCCCcccccccc-----cc----------c----------cCHHHHHHHHHhhcCCcEEEE
Q 025492 131 MKYIPNYFEKGQLTKMFFLFPDPHFKEKNHR-----RR----------V----------ISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 131 ~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~k-----rr----------~----------~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.-+-...|+++++|.|+.++.-.|..+.-.. .+ + --..||+..++.|+|||++++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 5444567899999999999988886531100 00 0 013479999999999999999
Q ss_pred EeCc--------------hHHHHHHHHHHhcCCCcccccccccccCccccCCCCCCHHHHHHHHcCC-CeEEEE
Q 025492 186 ITDV--------------EELGDWMRSCLENHPMFEALTKEELEADPVVKLLSSATEEGQKVARNGG-QTFQAV 244 (252)
Q Consensus 186 ~td~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~t~~e~~~~~~G~-~i~~~~ 244 (252)
.+-. .+....++..+...+.......+.+. .|. +.....++...+.+.|. .|-++.
T Consensus 208 ~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~-~P~--y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 208 TILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFN-IPQ--YTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGC-CCC--BCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred EEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccC-CCc--cCCCHHHHHHHHHHcCCceEEEEE
Confidence 8621 12233344444444433222212121 232 23455678888888876 776664
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.20 E-value=3.7e-06 Score=80.50 Aligned_cols=101 Identities=14% Similarity=0.091 Sum_probs=66.1
Q ss_pred ceEEEEcCcccHHHHHH---HH-HC---------CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCccc
Q 025492 67 IQFADIGCGFGGLLISL---ST-LF---------PEVLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSMK 132 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~l---A~-~~---------p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~~ 132 (252)
.+|||||||+|.++... ++ .. ....|+|||.++.++...+.... ++. +.|.++++|+.+
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-------Ng~~d~VtVI~gd~ee 483 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-------RTWKRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-------HTTTTCSEEEESCGGG
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-------cCCCCeEEEEeCchhh
Confidence 48999999999996432 21 11 23589999999977755444332 144 449999999975
Q ss_pred ccCccCC-----CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEE
Q 025492 133 YIPNYFE-----KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGII 183 (252)
Q Consensus 133 ~l~~~~~-----~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l 183 (252)
+. ++ +..+|.|+.=...-.-- .-..++.|..+.+.|||||.+
T Consensus 484 -v~--lp~~~~~~ekVDIIVSElmGsfl~------nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 484 -LP--GIAKDRGFEQPDIIVSELLGSFGD------NELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp -HH--HHHHHTTCCCCSEEEECCCBTTBG------GGSHHHHHHTTGGGSCTTCEE
T ss_pred -cc--cccccCCCCcccEEEEeccccccc------hhccHHHHHHHHHhCCCCcEE
Confidence 43 32 46789988643221100 012346777788999999976
No 288
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.10 E-value=1.1e-05 Score=76.98 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=64.9
Q ss_pred ceEEEEcCcccHH---HHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 67 IQFADIGCGFGGL---LISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 67 ~~vLDIGcG~G~~---~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
.+|||||||+|.+ ++..+++. -...|++||.++.+. .|.+..... +--+.|.++++|+.+ +. + +..
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N-----~~~dkVtVI~gd~ee-v~--L-PEK 428 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFE-----EWGSQVTVVSSDMRE-WV--A-PEK 428 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHH-----TTGGGEEEEESCTTT-CC--C-SSC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhc-----cCCCeEEEEeCccee-cc--C-Ccc
Confidence 4899999999988 44444442 223689999998544 566555443 234569999999875 43 2 467
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEE
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGII 183 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l 183 (252)
+|.|+.=.-.-. --...+ ...+....+.|||||.+
T Consensus 429 VDIIVSEwMG~f----Ll~E~m--levL~Ardr~LKPgGim 463 (637)
T 4gqb_A 429 ADIIVSELLGSF----ADNELS--PECLDGAQHFLKDDGVS 463 (637)
T ss_dssp EEEEECCCCBTT----BGGGCH--HHHHHHHGGGEEEEEEE
T ss_pred cCEEEEEcCccc----ccccCC--HHHHHHHHHhcCCCcEE
Confidence 888874221111 111112 24677778999999986
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.06 E-value=8.9e-06 Score=63.12 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=56.7
Q ss_pred ceEEEEcCccc-HHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC-CCccc
Q 025492 67 IQFADIGCGFG-GLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE-KGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~G-~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~-~~s~d 144 (252)
..|||||||+| ..+..||+.. +..|+++|+++.++ . +++.|+.. + .+. -..+|
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av------------------~---~v~dDiF~--P-~~~~Y~~~D 91 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHG------------------G---IVRDDITS--P-RMEIYRGAA 91 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSST------------------T---EECCCSSS--C-CHHHHTTEE
T ss_pred CcEEEEccCCChHHHHHHHHhC-CCeEEEEECCcccc------------------c---eEEccCCC--C-cccccCCcC
Confidence 48999999999 6999999842 67899999998643 1 77888642 1 111 14789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.||..=|.|-. ++ .+..+++.. |.-++|.+
T Consensus 92 LIYsirPP~El----------~~-~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 92 LIYSIRPPAEI----------HS-SLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EEEEESCCTTT----------HH-HHHHHHHHH--TCEEEEEC
T ss_pred EEEEcCCCHHH----------HH-HHHHHHHHc--CCCEEEEc
Confidence 99876555542 22 444444433 77888876
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.05 E-value=1.7e-05 Score=67.91 Aligned_cols=109 Identities=14% Similarity=0.048 Sum_probs=68.6
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...|||||||.|.++...++..+...++|+|+...+...+.. .. ....++..+..++. .. .+....+|.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-------~~-~~g~~ii~~~~~~d-v~--~l~~~~~Dv 159 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-------RT-TLGWNLIRFKDKTD-VF--NMEVIPGDT 159 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-------CC-BTTGGGEEEECSCC-GG--GSCCCCCSE
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-------cc-cCCCceEEeeCCcc-hh--hcCCCCcCE
Confidence 458999999999999999988777789999998653211100 00 01124444454432 12 255678999
Q ss_pred EEEeCCCCccc--cccccccccCHHHHHHHHHhhcCC--cEEEEEeCc
Q 025492 146 MFFLFPDPHFK--EKNHRRRVISPHLLDEYAYVLGVG--GIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k--~~h~krr~~~~~~l~~~~~~Lkpg--G~l~~~td~ 189 (252)
|.......--. ..|. | +..+|+.+..+|+|| |.|+++.-.
T Consensus 160 VLSDmApnsG~~~~D~~--r--s~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 160 LLCDIGESSPSIAVEEQ--R--TLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp EEECCCCCCSCHHHHHH--H--HHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred EEecCccCCCChHHHHH--H--HHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 99864221110 1111 1 123588888999999 999998755
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.04 E-value=2.6e-05 Score=73.10 Aligned_cols=121 Identities=18% Similarity=0.179 Sum_probs=79.4
Q ss_pred CceEEEEcCcccHHHHHHHHHC-------------CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-------------PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-------------p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
...|+|-.||+|.+++..++.. ....++|+|+++.+...|+-++.-. +..+-.+..+|...
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh------g~~~~~I~~~dtL~ 291 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH------GLEYPRIDPENSLR 291 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH------TCSCCEEECSCTTC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc------CCcccccccccccc
Confidence 4589999999999998876531 1346999999999998887766443 55555667777642
Q ss_pred c-cCccCCCCcccEEEEeCCCCccccccc--------cccccCHHHHHHHHHhhc-------CCcEEEEEeCchHH
Q 025492 133 Y-IPNYFEKGQLTKMFFLFPDPHFKEKNH--------RRRVISPHLLDEYAYVLG-------VGGIIYTITDVEEL 192 (252)
Q Consensus 133 ~-l~~~~~~~s~d~i~~~fpdP~~k~~h~--------krr~~~~~~l~~~~~~Lk-------pgG~l~~~td~~~~ 192 (252)
. +....+...+|.|+.|.|---...... +..-..-.|+..+.+.|| +||++.+++.+-.+
T Consensus 292 ~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~L 367 (530)
T 3ufb_A 292 FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTL 367 (530)
T ss_dssp SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHH
T ss_pred CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhh
Confidence 1 112223457999999987421110000 000112357888888887 69999998875433
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.99 E-value=1.4e-05 Score=69.19 Aligned_cols=46 Identities=24% Similarity=0.198 Sum_probs=41.0
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHH
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILAL 112 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~ 112 (252)
++.+|||++||+|.+++++++. +..++|||+++.+++.|++++...
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 4569999999999999998887 578999999999999999888654
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.77 E-value=0.0002 Score=61.78 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=66.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...||||||+.|.++..++++.+...++|+|+...+..... .....+ .++..+..++. .. .+....+|.
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~-------~~~~~~-~~iv~~~~~~d-i~--~l~~~~~Dl 150 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPI-------HMQTLG-WNIVKFKDKSN-VF--TMPTEPSDT 150 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-------CCCBTT-GGGEEEECSCC-TT--TSCCCCCSE
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccc-------cccccC-CceEEeecCce-ee--ecCCCCcCE
Confidence 56999999999999999998876667899999754210000 000001 13333333322 12 245678999
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEEeCc
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTITDV 189 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~td~ 189 (252)
|+...... .-. +.....-+..+|+.+..+|+|| |.|+++.-.
T Consensus 151 VlsD~APn-sG~-~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 151 LLCDIGES-SSN-PLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp EEECCCCC-CSS-HHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred EeecCcCC-CCC-HHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 98754211 111 0000111234588889999999 999998754
No 294
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.73 E-value=3.1e-05 Score=68.12 Aligned_cols=74 Identities=14% Similarity=0.182 Sum_probs=58.2
Q ss_pred CceEEEEcCcccHHHHHHHHH-CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC----
Q 025492 66 KIQFADIGCGFGGLLISLSTL-FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK---- 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~---- 140 (252)
+.++||..||.|.++..++++ .|...++|+|+++.+++.|+ ++ ...++.+++++..+ +...++.
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---------~~~Rv~lv~~nF~~-l~~~L~~~g~~ 126 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---------DDPRFSIIHGPFSA-LGEYVAERDLI 126 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---------CCTTEEEEESCGGG-HHHHHHHTTCT
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---------cCCcEEEEeCCHHH-HHHHHHhcCCC
Confidence 569999999999999999998 47889999999999988763 22 23689999999864 4333332
Q ss_pred CcccEEEEeC
Q 025492 141 GQLTKMFFLF 150 (252)
Q Consensus 141 ~s~d~i~~~f 150 (252)
+++|.|++++
T Consensus 127 ~~vDgILfDL 136 (347)
T 3tka_A 127 GKIDGILLDL 136 (347)
T ss_dssp TCEEEEEEEC
T ss_pred CcccEEEECC
Confidence 3699998765
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.69 E-value=0.00016 Score=64.38 Aligned_cols=86 Identities=13% Similarity=0.145 Sum_probs=62.8
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
++..+||+||+.|.++..++++ +..|+|||+.+- .. .+ ...++|.++++|+.... .+...+|
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l----~~-~l--------~~~~~V~~~~~d~~~~~---~~~~~~D 272 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPM----AQ-SL--------MDTGQVTWLREDGFKFR---PTRSNIS 272 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCC----CH-HH--------HTTTCEEEECSCTTTCC---CCSSCEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhc----Ch-hh--------ccCCCeEEEeCcccccc---CCCCCcC
Confidence 3568999999999999999998 679999998641 11 11 14578999999986422 3356899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG 180 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg 180 (252)
.|+.....++. ..+..+.++|..|
T Consensus 273 ~vvsDm~~~p~------------~~~~l~~~wl~~~ 296 (375)
T 4auk_A 273 WMVCDMVEKPA------------KVAALMAQWLVNG 296 (375)
T ss_dssp EEEECCSSCHH------------HHHHHHHHHHHTT
T ss_pred EEEEcCCCChH------------HhHHHHHHHHhcc
Confidence 99987755442 3666677777665
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.68 E-value=0.00016 Score=62.30 Aligned_cols=107 Identities=15% Similarity=0.155 Sum_probs=71.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-CcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-NSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-da~~~l~~~~~~~s~d 144 (252)
...||||||+.|.++...+.+.....|+|+|+-..--+ .-+..+..+...|.++.+ |+. .++ +..+|
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-------~P~~~~ql~w~lV~~~~~~Dv~-~l~----~~~~D 162 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-------EPQLVQSYGWNIVTMKSGVDVF-YRP----SECCD 162 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-------CCCCCCBTTGGGEEEECSCCTT-SSC----CCCCS
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-------CcchhhhcCCcceEEEeccCHh-hCC----CCCCC
Confidence 45999999999999998888876668999998654100 000001123345888887 764 333 46689
Q ss_pred EEEEeC----CCCccccccccccccCHHHHHHHHHhhcCC-cEEEEEeCch
Q 025492 145 KMFFLF----PDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTITDVE 190 (252)
Q Consensus 145 ~i~~~f----pdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~td~~ 190 (252)
.|++.. |+|+... .|. -..|+.+.++|++| |.|+++.-..
T Consensus 163 ~ivcDigeSs~~~~ve~----~Rt--l~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 163 TLLCDIGESSSSAEVEE----HRT--IRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEEECCCCCCSCHHHHH----HHH--HHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEEECccCCCChhhhh----hHH--HHHHHHHHHHhccCCCcEEEEEcCC
Confidence 998765 3444221 111 12788889999999 9999987655
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.57 E-value=8.8e-05 Score=62.71 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=60.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC----CeEEEEec--CHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-CcccccCccC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE----VLMIGMEL--RDKVTEYVKERILALRVSNPGQYQNISVVRT-NSMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~----~~~iGiDi--s~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-da~~~l~~~~ 138 (252)
...|||+||+.|.++...+++-+- ..++|+|+ .+-.. ...+..=+.|.++ |+.+ +
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------------~~~Gv~~i~~~~G~Df~~-----~ 135 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------------QSYGWNIVTMKSGVDVFY-----K 135 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------------CSTTGGGEEEECSCCGGG-----S
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------------cCCCceEEEeeccCCccC-----C
Confidence 569999999999999999987222 23455552 11000 0011122355556 8763 3
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCc-EEEEEeCc
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGG-IIYTITDV 189 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG-~l~~~td~ 189 (252)
....+|.|.......-....-..-|.+. .|+.+.++|+||| .|+++.-.
T Consensus 136 ~~~~~DvVLSDMAPnSG~~~vD~~Rs~~--aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 136 PSEISDTLLCDIGESSPSAEIEEQRTLR--ILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHH--HHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCCCEEEeCCCCCCCccHHHHHHHHH--HHHHHHHHhhcCCcEEEEEECC
Confidence 3457899988652211111111112222 6777779999999 88887754
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.57 E-value=0.00025 Score=61.70 Aligned_cols=128 Identities=18% Similarity=0.153 Sum_probs=73.3
Q ss_pred ceEEEEcCcccHHHHHHH----HHCCCC--eEEEEecCH--------hHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 67 IQFADIGCGFGGLLISLS----TLFPEV--LMIGMELRD--------KVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA----~~~p~~--~~iGiDis~--------~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
-.|||+|+|+|...+... +..|.. .++++|..+ .........+...-..-..+.-.+.++.+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 479999999998654322 336654 568888532 111111111111100001122246788999988
Q ss_pred ccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhcCC
Q 025492 133 YIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 133 ~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 204 (252)
.++. +....+|.||+.- ..-.+. .-+=+..+++.+++.++|||+|.--|- +-.+...|.+.+
T Consensus 178 ~l~~-l~~~~~Da~flDg---FsP~kN--PeLWs~e~f~~l~~~~~pgg~laTYta----ag~VRR~L~~aG 239 (308)
T 3vyw_A 178 RIKE-VENFKADAVFHDA---FSPYKN--PELWTLDFLSLIKERIDEKGYWVSYSS----SLSVRKSLLTLG 239 (308)
T ss_dssp HGGG-CCSCCEEEEEECC---SCTTTS--GGGGSHHHHHHHHTTEEEEEEEEESCC----CHHHHHHHHHTT
T ss_pred HHhh-hcccceeEEEeCC---CCcccC--cccCCHHHHHHHHHHhCCCcEEEEEeC----cHHHHHHHHHCC
Confidence 7765 4455799999842 110000 112256899999999999999875442 234455566555
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.50 E-value=0.00046 Score=57.67 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=71.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-CcccccCccCCCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-NSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-da~~~l~~~~~~~s~d 144 (252)
...||||||+.|.++...+.+.....|+|+|+-..--+ .-+..+..+...|.|..+ |+. .++ +..+|
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-------~P~~~~s~gwn~v~fk~gvDv~-~~~----~~~~D 146 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-------EPVPMSTYGWNIVKLMSGKDVF-YLP----PEKCD 146 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-------CCCCCCCTTTTSEEEECSCCGG-GCC----CCCCS
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-------CcchhhhcCcCceEEEecccee-ecC----Ccccc
Confidence 45999999999999999999877778999998753110 000112345678999998 864 233 46699
Q ss_pred EEEEeC----CCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 145 KMFFLF----PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 145 ~i~~~f----pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
.|.+.. |+|+.. + .|. -..|+.+.++|++ |.|+++.-.
T Consensus 147 tllcDIgeSs~~~~vE--~--~Rt--lrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVE--E--SRT--IRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp EEEECCCCCCSCHHHH--H--HHH--HHHHHHHGGGCSS-CEEEEEESC
T ss_pred EEEEecCCCCCChhhh--h--hHH--HHHHHHHHHhccc-CCEEEEEcc
Confidence 999865 333321 1 111 1278888899999 888887644
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.42 E-value=0.00027 Score=62.77 Aligned_cols=58 Identities=9% Similarity=0.173 Sum_probs=46.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
...|||||.|.|.++..|+.......+++||+++..+...++.. ..+|+.++.+|+..
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~---------~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF---------EGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT---------TTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc---------cCCCEEEEECCccc
Confidence 46899999999999999999754457999999999876654432 24689999999853
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.37 E-value=0.00028 Score=59.82 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHH
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERIL 110 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~ 110 (252)
++.+|||..||+|..+++.++. +.+++|+|+++.+++.|.+++.
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 4679999999999999998888 6799999999999999988764
No 302
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.06 E-value=0.00075 Score=64.94 Aligned_cols=123 Identities=20% Similarity=0.215 Sum_probs=77.3
Q ss_pred ceEEEEcCcccHHHHHHHHH-------CCC-----CeEEEEecCH---hHHHHHHHH-------HHHHhhcC--------
Q 025492 67 IQFADIGCGFGGLLISLSTL-------FPE-----VLMIGMELRD---KVTEYVKER-------ILALRVSN-------- 116 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~-------~p~-----~~~iGiDis~---~~i~~a~~~-------~~~~~~~~-------- 116 (252)
-+|+|+|+|+|...+.+.+. +|. ..|+.+|..+ +-+..|... ...+...-
T Consensus 60 ~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 60 CIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred eEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Confidence 48999999999988877664 232 5799999955 333322110 00110000
Q ss_pred ----CCCcccEEEEeCCcccccCccC--CCCcccEEEEeC------CCCccccccccccccCHHHHHHHHHhhcCCcEEE
Q 025492 117 ----PGQYQNISVVRTNSMKYIPNYF--EKGQLTKMFFLF------PDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIY 184 (252)
Q Consensus 117 ----~~~~~nv~~~~~da~~~l~~~~--~~~s~d~i~~~f------pdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~ 184 (252)
..+.-.+.++.+|+.+.|+..- ....+|.+|+.- |+-| +..++..++++++|||++.
T Consensus 140 r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w-----------~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMW-----------NEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTC-----------SHHHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhh-----------hHHHHHHHHHHhCCCCEEE
Confidence 0111257889999988776432 146799999842 3334 5589999999999999987
Q ss_pred EEeCchHHHHHHHHHHhcCC
Q 025492 185 TITDVEELGDWMRSCLENHP 204 (252)
Q Consensus 185 ~~td~~~~~~~~~~~~~~~~ 204 (252)
.-+-. ..+...+.+.+
T Consensus 209 t~~~~----~~vr~~l~~aG 224 (689)
T 3pvc_A 209 TFTAA----GFVRRGLQQAG 224 (689)
T ss_dssp ESCCC----HHHHHHHHHTT
T ss_pred eccCc----HHHHHHHHhCC
Confidence 65533 23455555554
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.94 E-value=0.0015 Score=57.60 Aligned_cols=78 Identities=12% Similarity=0.199 Sum_probs=53.8
Q ss_pred ceEEEEcCcccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 67 IQFADIGCGFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
..|||+.||.|.+.+.+..+.-. ..++++|+++.+++..+.|. ++..++.+|+.+.....++...+|.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~-----------~~~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF-----------PHTQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-----------TTSCEECSCGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc-----------cccccccCCHHHccHhHcCcCCcCE
Confidence 47999999999999999988421 36899999999887665543 2345778898753222222226899
Q ss_pred EEEeCCCCcc
Q 025492 146 MFFLFPDPHF 155 (252)
Q Consensus 146 i~~~fpdP~~ 155 (252)
|+..+|..-+
T Consensus 72 l~~gpPCq~f 81 (343)
T 1g55_A 72 ILMSPPCQPF 81 (343)
T ss_dssp EEECCC----
T ss_pred EEEcCCCcch
Confidence 9999885443
No 304
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.90 E-value=0.0027 Score=53.81 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=70.9
Q ss_pred ceEEEEcCcccHHHHHHHHH-------CCCCeEEEEecCHhHH------------------------HHHHHHHHHHhhc
Q 025492 67 IQFADIGCGFGGLLISLSTL-------FPEVLMIGMELRDKVT------------------------EYVKERILALRVS 115 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~-------~p~~~~iGiDis~~~i------------------------~~a~~~~~~~~~~ 115 (252)
..|+|+||-.|..++.+|.. +++..++|+|--..+- +...+.+......
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 37999999999999998763 4678999999211110 1111111111001
Q ss_pred CCCC--cccEEEEeCCcccccCccC---CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 116 NPGQ--YQNISVVRTNSMKYIPNYF---EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 116 ~~~~--~~nv~~~~~da~~~l~~~~---~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
...+ .+||.++.+++.+.|+.++ +...+|.+++.. | +.. -....++.+...|+|||.|++
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D-~Y~--------~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-D-LYE--------PTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-C-CHH--------HHHHHHHHHGGGEEEEEEEEE
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-c-ccc--------hHHHHHHHHHHHhCCCcEEEE
Confidence 1122 2789999999988777543 345799999875 3 210 122578899999999999987
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.89 E-value=0.0049 Score=55.11 Aligned_cols=124 Identities=10% Similarity=0.027 Sum_probs=74.9
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC-----CCCc
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF-----EKGQ 142 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~-----~~~s 142 (252)
.+||+-||.|.+++.+.++. -..+.++|+++.+++..+.| .++..++.+|+.+.....+ ....
T Consensus 4 ~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N-----------~~~~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAIN-----------FPRSLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHH-----------CTTSEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred eEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHh-----------CCCCceEecChhhcCHHHHHhhcccCCC
Confidence 69999999999999999884 23467999999877654433 3467788899875322112 3467
Q ss_pred ccEEEEeCCCCcccccccc-----ccccCHHHHHHHHHhhcCCcEEE------EEeCchHHHHHHHHHHhcCCC
Q 025492 143 LTKMFFLFPDPHFKEKNHR-----RRVISPHLLDEYAYVLGVGGIIY------TITDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~k-----rr~~~~~~l~~~~~~LkpgG~l~------~~td~~~~~~~~~~~~~~~~~ 205 (252)
+|.|+..+|..-+.....+ |.-+...+++ +...++|.-.++ +..+...++..+. .+.+.++
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY 143 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDY 143 (376)
T ss_dssp CCEEEECCCCCTTC-------CHHHHHHHHHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTE
T ss_pred eeEEEecCCCCCcccccCCCCCCchHHHHHHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCC
Confidence 9999999886544322111 1111122332 334456754444 2223345677777 7766543
No 306
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.83 E-value=0.0078 Score=57.59 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=72.3
Q ss_pred CceEEEEcCcccHHHHHHHHH-------CCC-----CeEEEEec---CHhHHHHHHH-----------HHHHHhhcC---
Q 025492 66 KIQFADIGCGFGGLLISLSTL-------FPE-----VLMIGMEL---RDKVTEYVKE-----------RILALRVSN--- 116 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~-------~p~-----~~~iGiDi---s~~~i~~a~~-----------~~~~~~~~~--- 116 (252)
..+|||+|+|+|...+...+. +|. ..|+++|. +.+.+..+.. .+.......
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 358999999999988766554 232 45999999 6655543322 111110000
Q ss_pred -----CCCcccEEEEeCCcccccCccC--CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 117 -----PGQYQNISVVRTNSMKYIPNYF--EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 117 -----~~~~~nv~~~~~da~~~l~~~~--~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
..+.-.+.+..+|+.+.++..- ....+|.+|+.--.|- +. .-+=+..++..++++++|||++...+-.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~---~n--p~~w~~~~~~~l~~~~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPA---KN--PDMWTQNLFNAMARLARPGGTLATFTSA 221 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGG---GC--GGGSCHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCc---CC--hhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 0011346788899987776431 1367999988421111 00 1123568999999999999998765543
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.72 E-value=0.0057 Score=55.24 Aligned_cols=64 Identities=13% Similarity=0.095 Sum_probs=50.1
Q ss_pred CCceEEEEcCcccHHHHHHH-HHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCc-ccEEEEeCCcc
Q 025492 65 KKIQFADIGCGFGGLLISLS-TLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQY-QNISVVRTNSM 131 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA-~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~-~nv~~~~~da~ 131 (252)
+..+++|||++.|.++..+| +..+. ..++++|.++...+..++++... .+++. +|+.++..-+.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~---~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRY---TDTNFASRITVHGCGAG 292 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHT---TTSTTGGGEEEECSEEC
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhh---hccCCCCCEEEEEeEEE
Confidence 36699999999999999988 56654 79999999999998888877541 11345 78888876543
No 308
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.61 E-value=0.013 Score=50.54 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCCceEEEEcC------cccHHHHHHHHHCCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCc
Q 025492 64 SKKIQFADIGC------GFGGLLISLSTLFPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPN 136 (252)
Q Consensus 64 ~~~~~vLDIGc------G~G~~~~~lA~~~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~ 136 (252)
+.+.+|||+|+ -.|.+ .+.+..|. ..++++|+.+-. ...+ .++++|... +.
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-----------------sda~-~~IqGD~~~-~~- 165 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-----------------SDAD-STLIGDCAT-VH- 165 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-----------------CSSS-EEEESCGGG-EE-
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-----------------cCCC-eEEEccccc-cc-
Confidence 34679999996 66773 55556776 699999997621 1223 458999753 22
Q ss_pred cCCCCcccEEEEeCCCCccccccccc-cc--cCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 137 YFEKGQLTKMFFLFPDPHFKEKNHRR-RV--ISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 137 ~~~~~s~d~i~~~fpdP~~k~~h~kr-r~--~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
..+.+|.|+.....+-.......+ |. +.+..++-+.+.|+|||.|+++.-
T Consensus 166 --~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 166 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp --ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 247799999876444333222211 22 235566777889999999999863
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.31 E-value=0.023 Score=49.75 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=76.8
Q ss_pred CceEEEEcCcccHHHHHHHHHC-CCCeE-EEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF-PEVLM-IGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~-p~~~~-iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...++|+-||.|.+...+.+.. +...+ .++|+++.+++.-+.|. . +. ++.+|+.+.-...++...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~---------~--~~-~~~~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF---------K--EE-VQVKNLDSISIKQIESLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH---------C--CC-CBCCCTTTCCHHHHHHTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC---------C--CC-cccCChhhcCHHHhccCCC
Confidence 3489999999999999998874 22345 79999998876655543 1 11 5567876422222333368
Q ss_pred cEEEEeCCCCcc--ccccccccc--cCHHHHHHHHH-hhcC---CcEEEEEeCchH-----HHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHF--KEKNHRRRV--ISPHLLDEYAY-VLGV---GGIIYTITDVEE-----LGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~--k~~h~krr~--~~~~~l~~~~~-~Lkp---gG~l~~~td~~~-----~~~~~~~~~~~~~~ 205 (252)
|.++..+|..-+ .....++.. ....++.++.+ +++. .-.+++.-++.. .+..+.+.+.+.++
T Consensus 78 Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY 152 (327)
T 3qv2_A 78 NTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQY 152 (327)
T ss_dssp CEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTC
T ss_pred CEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCC
Confidence 999999886655 211111111 11245666666 5542 234555444433 45667777776554
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.24 E-value=0.012 Score=51.78 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=61.9
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC------cccccCccC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN------SMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d------a~~~l~~~~ 138 (252)
...||-+|+|. |.+++.+|+......++++|.++..++.+++ + +.+.+ +..+ ..+.+....
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~~v--i~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----I------GADLV--LQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T------TCSEE--EECSSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h------CCCEE--EcCcccccchHHHHHHHHh
Confidence 55788899987 8889999998643389999999987766542 1 44422 2222 111111111
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
. ..+|.|+-.-.. ...++...+.|++||++++..
T Consensus 240 ~-~g~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 G-CKPEVTIECTGA--------------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp T-SCCSEEEECSCC--------------HHHHHHHHHHSCTTCEEEECS
T ss_pred C-CCCCEEEECCCC--------------hHHHHHHHHHhcCCCEEEEEe
Confidence 2 457888755432 237788899999999998753
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.19 E-value=0.037 Score=48.41 Aligned_cols=121 Identities=11% Similarity=0.107 Sum_probs=73.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
...+||+.||.|.+.+.+..+. -..+.++|+++.+++..+.+.. ... .+|+.+.....++ .+|.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~--------~~~-----~~Di~~~~~~~~~--~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFG--------EKP-----EGDITQVNEKTIP--DHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHS--------CCC-----BSCGGGSCGGGSC--CCSE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcC--------CCC-----cCCHHHcCHhhCC--CCCE
Confidence 3589999999999999998874 3357899999988876665541 111 6887753333333 4899
Q ss_pred EEEeCCCCccccccccc-----c-ccCHHHHHHHHHhhcCCcEEEEEeCch--------HHHHHHHHHHhcCCC
Q 025492 146 MFFLFPDPHFKEKNHRR-----R-VISPHLLDEYAYVLGVGGIIYTITDVE--------ELGDWMRSCLENHPM 205 (252)
Q Consensus 146 i~~~fpdP~~k~~h~kr-----r-~~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~~~ 205 (252)
|+..+|..-+.....++ | -+...+++.+ +.++|. +++.-++. ..+..+.+.+.+.++
T Consensus 75 l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~--~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY 145 (327)
T 2c7p_A 75 LCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPK--VVFMENVKNFASHDNGNTLEVVKNTMNELDY 145 (327)
T ss_dssp EEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCS--EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTB
T ss_pred EEECCCCCCcchhcccCCCcchhhHHHHHHHHHH-HhccCc--EEEEeCcHHHHhccccHHHHHHHHHHHhCCC
Confidence 99998865543221111 1 1112333333 345775 33323322 356677777776554
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.07 E-value=0.0049 Score=52.84 Aligned_cols=120 Identities=10% Similarity=0.019 Sum_probs=81.4
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC-CcccEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK-GQLTKM 146 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~-~s~d~i 146 (252)
.+||+=+|||.+++.+.+. ...++.+|.++..++..++++. ...++++++.|+...+....++ ..+|.|
T Consensus 94 ~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~--------~~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPH--------FNKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCC--------TTSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred CceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhC--------cCCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 5899999999999998884 5689999999988766555431 2467999999987656433333 368998
Q ss_pred EEeCCCCccccccccccccCHHHHHHHHH--hhcCCcEEEEEeCc--hHHHHHHHHHHhcCCC
Q 025492 147 FFLFPDPHFKEKNHRRRVISPHLLDEYAY--VLGVGGIIYTITDV--EELGDWMRSCLENHPM 205 (252)
Q Consensus 147 ~~~fpdP~~k~~h~krr~~~~~~l~~~~~--~LkpgG~l~~~td~--~~~~~~~~~~~~~~~~ 205 (252)
++ ||.+.... .....++.+.. .+.|+|++.+-... ....+.|.+.+...+.
T Consensus 164 fi---DPPYe~k~-----~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 164 FI---DPSYERKE-----EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp EE---CCCCCSTT-----HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred EE---CCCCCCCc-----HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 88 45443111 11235555554 45689999986543 4456677777765443
No 313
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.89 E-value=0.011 Score=51.74 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
+...||=+|+|. |..++.+|+......++++|.+++.++.+++ + +.+.+.-...|..+.+........+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----l------Ga~~~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----V------GADAAVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----T------TCSEEEECSTTHHHHHHHHHGGGCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----c------CCCEEEcCCCcHHHHHHHHhCCCCC
Confidence 356888899987 8888999998766799999999987776643 1 4333211111222112111112357
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+-.-.. ...++...+.|++||++++.-
T Consensus 241 d~v~d~~G~--------------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVGA--------------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSCC--------------HHHHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCCC--------------HHHHHHHHHHHhcCCEEEEEC
Confidence 777754432 248889999999999998753
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.82 E-value=0.017 Score=51.04 Aligned_cols=95 Identities=17% Similarity=0.270 Sum_probs=62.2
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
....||-+|||. |..++.+|+......++++|.+++.++.+++ + +.+.+ +.. |..+.+... ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~~v--i~~~~~~~~~~~~~~-~~ 256 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----L------GATHV--INSKTQDPVAAIKEI-TD 256 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----H------TCSEE--EETTTSCHHHHHHHH-TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----c------CCCEE--ecCCccCHHHHHHHh-cC
Confidence 356899999987 8889999988633369999999988776643 2 33322 221 221112211 12
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+.+|.|+-.-.. ...++...+.|++||++++.
T Consensus 257 gg~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 257 GGVNFALESTGS--------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp SCEEEEEECSCC--------------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCC--------------HHHHHHHHHHHhcCCEEEEe
Confidence 367877754332 24788899999999999875
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.81 E-value=0.0092 Score=53.35 Aligned_cols=108 Identities=11% Similarity=0.027 Sum_probs=63.4
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---Cc-ccccCccCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NS-MKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da-~~~l~~~~~ 139 (252)
....||-+|||. |.+++.+|+......++++|.+++.++.+++ .+.. ++.. |. .+.+.....
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----------lGa~---~i~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----------AGFE---TIDLRNSAPLRDQIDQILG 251 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----------TTCE---EEETTSSSCHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------cCCc---EEcCCCcchHHHHHHHHhC
Confidence 356899999987 8899999998643389999999987765532 1432 2322 21 111211111
Q ss_pred CCcccEEEEeCCCCcccc-ccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKE-KNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~-~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
...+|.|+-.-..+.... .... -+.....++.+.+.|++||++++.
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEAN-TETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTT-SBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCEEEECCCCcccccccccc-ccccHHHHHHHHHHHhcCCEEEEe
Confidence 225888876554332000 0000 000123788899999999999764
No 316
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.72 E-value=0.034 Score=48.68 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=60.8
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe--CCcccccCccCC---
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR--TNSMKYIPNYFE--- 139 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~--~da~~~l~~~~~--- 139 (252)
...||-+|+|. |..++.+|+.. +..++++|.+++.++.+++ + +.+.+--.. .|..+.+.....
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKN----C------GADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----T------TCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHH----h------CCCEEEcCcccccHHHHHHHHhcccc
Confidence 55788899986 88888999886 5569999999987766542 1 443221111 121111211111
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
...+|.|+-.-.. ...++...+.|+++|++++.
T Consensus 238 g~g~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 238 GDLPNVTIDCSGN--------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSCCSEEEECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 2357888755432 13778889999999999875
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.68 E-value=0.011 Score=51.65 Aligned_cols=44 Identities=14% Similarity=-0.002 Sum_probs=38.2
Q ss_pred CCCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHH
Q 025492 64 SKKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERI 109 (252)
Q Consensus 64 ~~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~ 109 (252)
.++.+|||.-||+|..+.+..+. +.+++|+|+++..++.|..++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGG
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHH
Confidence 35679999999999999988887 679999999999988887665
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.53 E-value=0.023 Score=49.81 Aligned_cols=128 Identities=9% Similarity=0.123 Sum_probs=73.8
Q ss_pred ceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 67 IQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
-.++|+-||.|.+...+.+..- ...+.++|+++.+++.-+.| .++..++.+|+.+.....++...+|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N-----------~~~~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN-----------FPETNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH-----------CTTSCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh-----------CCCCceeccccccCCHHHhccCCCCE
Confidence 3799999999999999988843 24578999999876544433 23345677888753222233346899
Q ss_pred EEEeCCCCccccccccccccC--HHHHHHHHHhhcC-C-cEEEEEeCchH-----HHHHHHHHHhcCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVIS--PHLLDEYAYVLGV-G-GIIYTITDVEE-----LGDWMRSCLENHPM 205 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~--~~~l~~~~~~Lkp-g-G~l~~~td~~~-----~~~~~~~~~~~~~~ 205 (252)
++..+|..-+.....++..-. ..++-++.++++. . -.+++.-++.. ..+.+.+.+.+.++
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~~~~~~i~~~l~~~GY 141 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNF 141 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGSHHHHHHHHHHHHTTE
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhhhHHHHHHHHHHhCCC
Confidence 999888655432211111111 1233344444432 1 24444444332 35666777766543
No 319
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.45 E-value=0.018 Score=50.30 Aligned_cols=45 Identities=9% Similarity=-0.160 Sum_probs=38.4
Q ss_pred CCceEEEEcCcccHHHHHHHHHCCCCeEEEEecCH---hHHHHHHHHHHH
Q 025492 65 KKIQFADIGCGFGGLLISLSTLFPEVLMIGMELRD---KVTEYVKERILA 111 (252)
Q Consensus 65 ~~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~---~~i~~a~~~~~~ 111 (252)
++.+|||--||+|..+.+..+. +..++|+|+++ ..++.|.+++..
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHH
Confidence 4679999999999999999988 67999999999 888888777643
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.26 E-value=0.033 Score=48.72 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=62.3
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe---CCcccccCccCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR---TNSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~---~da~~~l~~~~~~ 140 (252)
+...||=+|+|. |.+++.+|+......++++|.+++.++.+++ + +.+. ++. .|..+.+......
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~--vi~~~~~~~~~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----Y------GATD--IINYKNGDIVEQILKATDG 233 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----H------TCCE--EECGGGSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----h------CCce--EEcCCCcCHHHHHHHHcCC
Confidence 355788889987 8888889987643379999999987766643 2 3332 222 1222222222223
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
..+|.|+-....+ ..++...+.|++||++++.
T Consensus 234 ~g~D~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 234 KGVDKVVIAGGDV--------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CCEEEEEECSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCh--------------HHHHHHHHHHhcCCEEEEe
Confidence 3588887654433 3788899999999999864
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.20 E-value=0.033 Score=49.10 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=62.1
Q ss_pred CceEEEEc-Ccc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIG-CGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIG-cG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...||=+| +|. |.+++.+|+...+..++++|.+++.++.+++ + +.+.+--...|..+.+... ..+.+
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----l------Gad~vi~~~~~~~~~v~~~-~~~g~ 240 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----L------GAHHVIDHSKPLAAEVAAL-GLGAP 240 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----T------TCSEEECTTSCHHHHHHTT-CSCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----c------CCCEEEeCCCCHHHHHHHh-cCCCc
Confidence 45788888 655 8899999987557799999999887766543 2 4332211111222222222 34567
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|.|+-.-.. ...++.+.+.|++||++++.
T Consensus 241 Dvvid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTHT--------------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSCH--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCCc--------------hhhHHHHHHHhcCCCEEEEE
Confidence 877654321 24788999999999999875
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.17 E-value=0.036 Score=49.32 Aligned_cols=108 Identities=12% Similarity=0.039 Sum_probs=63.4
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---C-cccccCccCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---N-SMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---d-a~~~l~~~~~~ 140 (252)
...||-+|||. |.+++.+|+......++++|.+++.++.+++ + +.+ .+.. + ..+.+......
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~---~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----Q------GFE---IADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T------TCE---EEETTSSSCHHHHHHHHHSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----c------CCc---EEccCCcchHHHHHHHHhCC
Confidence 55788899987 8899999998744479999999987776643 1 443 2221 1 11112111122
Q ss_pred CcccEEEEeCCCCcccc-ccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKE-KNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~-~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
..+|.|+-.-..+.... ...-........++...+.|++||++++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 35788876544331000 00000001124788999999999999774
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.17 E-value=0.032 Score=48.51 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=61.5
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe--CCcccccCccCCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR--TNSMKYIPNYFEKG 141 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~--~da~~~l~~~~~~~ 141 (252)
+...||-+|+|. |..++.+|+.. +.+++++|.+++.++.+++ + +.+.+ +-. .|..+.+.. ..+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~~-i~~~~~~~~~~~~~--~~g 231 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----L------GAEVA-VNARDTDPAAWLQK--EIG 231 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----T------TCSEE-EETTTSCHHHHHHH--HHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----c------CCCEE-EeCCCcCHHHHHHH--hCC
Confidence 355788899986 99999999986 5699999999987776543 1 33322 111 121111211 113
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.+|.|+..... ...++...+.|++||++++.
T Consensus 232 ~~d~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAVS--------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCCC--------------HHHHHHHHHHhccCCEEEEe
Confidence 57777654322 25888999999999999875
No 324
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.16 E-value=0.072 Score=45.89 Aligned_cols=80 Identities=15% Similarity=0.025 Sum_probs=54.3
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCe-EEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC-CCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVL-MIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE-KGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~-~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~-~~s~ 143 (252)
...+||+-||.|.+...+.+..-... +.++|+++.+++.-+.+ .++..++.+|+.+.....++ ...+
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N-----------~~~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-----------HQGKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH-----------TTTCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh-----------CCCCceeCCChHHccHHHhcccCCc
Confidence 45899999999999999988743332 58999999876543322 23446778898753222222 1468
Q ss_pred cEEEEeCCCCccc
Q 025492 144 TKMFFLFPDPHFK 156 (252)
Q Consensus 144 d~i~~~fpdP~~k 156 (252)
|.++.-+|..-+.
T Consensus 85 Dll~ggpPCQ~fS 97 (295)
T 2qrv_A 85 DLVIGGSPCNDLS 97 (295)
T ss_dssp SEEEECCCCGGGB
T ss_pred CEEEecCCCcccc
Confidence 9999988765443
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.12 E-value=0.068 Score=46.59 Aligned_cols=88 Identities=13% Similarity=0.153 Sum_probs=61.8
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
....||-+|+|. |..++.+|+.. +.+++++|.+++..+.+++ + +.+.+. .|.. .+. . .+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~v~---~~~~-~~~----~-~~ 235 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----M------GVKHFY---TDPK-QCK----E-EL 235 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----T------TCSEEE---SSGG-GCC----S-CE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----c------CCCeec---CCHH-HHh----c-CC
Confidence 356788899987 88889999886 5689999999987766543 2 444332 3432 222 2 67
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|.|+-....+. .++...+.|++||++++.
T Consensus 236 D~vid~~g~~~--------------~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 236 DFIISTIPTHY--------------DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEEECCCSCC--------------CHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCcHH--------------HHHHHHHHHhcCCEEEEE
Confidence 88876554432 567788899999999886
No 326
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.00 E-value=0.027 Score=48.32 Aligned_cols=70 Identities=10% Similarity=0.007 Sum_probs=44.0
Q ss_pred CcccEEEEeCCcccccCccCCCCcccEEEEeCCCCccccc------------cccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 119 QYQNISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEK------------NHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 119 ~~~nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~------------h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.+.++.++++|+.+.+. .++++++|.|+.+.|=--.+.. +.........+++++.++|||||.+++.
T Consensus 18 ~~~~~~i~~gD~~~~l~-~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 18 SFGVHRLHVGDAREVLA-SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp ---CEEEEESCHHHHHT-TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCEEEECcHHHHHh-hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 45578999999987554 3677899999987652111100 0000000134678999999999999988
Q ss_pred eCc
Q 025492 187 TDV 189 (252)
Q Consensus 187 td~ 189 (252)
.++
T Consensus 97 ~~d 99 (297)
T 2zig_A 97 VGD 99 (297)
T ss_dssp ECC
T ss_pred ECC
Confidence 763
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.99 E-value=0.036 Score=48.25 Aligned_cols=69 Identities=12% Similarity=-0.023 Sum_probs=46.0
Q ss_pred ccEEEEeCCcccccCccCCCCcccEEEEeCCCCccccccccc------cccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 121 QNISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRR------RVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 121 ~nv~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~kr------r~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
.+..++++|+.+.+. .++++++|.|++..|=.-....+... .......+.++.++|+|||.+++..++.
T Consensus 13 ~~~~ii~gD~~~~l~-~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLE-SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGG-GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHh-hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 467899999986565 46788999999865421110000000 0012467889999999999999987764
No 328
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.87 E-value=0.094 Score=45.92 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=61.9
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC------CcccccCccC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT------NSMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~------da~~~l~~~~ 138 (252)
...||=+|+|. |.+++.+|+......++++|.+++..+.+++. . +.+..... |..+.+....
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~----------~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C----------PEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C----------TTCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c----------hhcccccccccchHHHHHHHHHHh
Confidence 45677789987 88899999987443599999999888776542 1 11111111 1111222222
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
....+|.|+-....+ ..++...+.|++||++++.
T Consensus 249 ~g~g~Dvvid~~g~~--------------~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 249 GGIEPAVALECTGVE--------------SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SSCCCSEEEECSCCH--------------HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCCEEEECCCCh--------------HHHHHHHHHhcCCCEEEEE
Confidence 234688887544322 3788899999999999885
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.65 E-value=0.088 Score=46.25 Aligned_cols=95 Identities=8% Similarity=-0.054 Sum_probs=62.2
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC---cccccCccCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN---SMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d---a~~~l~~~~~~ 140 (252)
....||=+|+|. |..++.+|+.. +.+++++|.+++.++.+++ + +.+.+ +..+ ..+.+......
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----L------GADHG--INRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----H------TCSEE--EETTTSCHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----c------CCCEE--EcCCcccHHHHHHHHhCC
Confidence 356899999887 88888888886 5699999999887766543 2 43322 2222 11112111223
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.|+-.-.. ..+....+.|++||++++..
T Consensus 256 ~g~D~vid~~g~---------------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 256 RGADHILEIAGG---------------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CCEEEEEEETTS---------------SCHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEECCCh---------------HHHHHHHHHhhcCCEEEEEe
Confidence 368888765442 25677888999999998863
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.63 E-value=0.12 Score=45.64 Aligned_cols=94 Identities=16% Similarity=0.245 Sum_probs=60.7
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
+...||-+|+|. |.+++.+|+.. +..++++|.+++.++.+++ + +.+.+ +..+-.+.+.. +. ..+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----l------Ga~~v--i~~~~~~~~~~-~~-~g~ 258 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----L------GADEV--VNSRNADEMAA-HL-KSF 258 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----H------TCSEE--EETTCHHHHHT-TT-TCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCcEE--eccccHHHHHH-hh-cCC
Confidence 356888899986 88888999886 5679999999987776653 2 33322 22211111211 11 457
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+-.-..+. .++...+.|+++|++++..
T Consensus 259 Dvvid~~g~~~--------------~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 259 DFILNTVAAPH--------------NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEEECCSSCC--------------CHHHHHTTEEEEEEEEECC
T ss_pred CEEEECCCCHH--------------HHHHHHHHhccCCEEEEec
Confidence 88775544332 5667888999999988753
No 331
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.62 E-value=0.064 Score=47.49 Aligned_cols=95 Identities=14% Similarity=0.027 Sum_probs=61.4
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC------cccccCccC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN------SMKYIPNYF 138 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d------a~~~l~~~~ 138 (252)
...||-+|+|. |..++.+|+......+++++.+++.++.+++ + +.+.+ +..+ ..+.+....
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----I------GADLT--LNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----T------TCSEE--EETTTSCHHHHHHHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----c------CCcEE--EeccccCcchHHHHHHHHh
Confidence 56899999875 8888899988633589999999987766542 1 43322 2221 111122112
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
....+|.|+-.-..+ ..++...+.|++||++++.
T Consensus 264 ~g~g~Dvvid~~g~~--------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 264 HGRGADFILEATGDS--------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp TTSCEEEEEECSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred CCCCCcEEEECCCCH--------------HHHHHHHHHHhcCCEEEEE
Confidence 222588887554332 2778888999999998875
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.60 E-value=0.073 Score=46.89 Aligned_cols=94 Identities=13% Similarity=0.054 Sum_probs=60.7
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~~ 139 (252)
...||-+|+|. |..++.+|+......++++|.+++.++.+++ + +.+.+ +.. +..+.+....
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~~~~~~~~- 259 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----F------GATDF--VNPNDHSEPISQVLSKMT- 259 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T------TCCEE--ECGGGCSSCHHHHHHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----h------CCceE--EeccccchhHHHHHHHHh-
Confidence 55788899986 8888899998643379999999987766542 1 43322 211 1111111111
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~ 186 (252)
.+.+|.|+-.-.. ...++.+.+.|++| |++++.
T Consensus 260 ~~g~D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 260 NGGVDFSLECVGN--------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp TSCBSEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCCEEEECCCC--------------HHHHHHHHHHhhcCCcEEEEE
Confidence 2368888754322 24788899999999 998875
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.51 E-value=0.072 Score=46.91 Aligned_cols=96 Identities=14% Similarity=-0.004 Sum_probs=61.8
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYF 138 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~ 138 (252)
+...||-+|+|. |.+++.+|+......++++|.+++.++.+++ + +.+.+ +.. |..+.+...
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~~v--i~~~~~~~~~~~~i~~~- 257 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----L------GATEC--LNPKDYDKPIYEVICEK- 257 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----T------TCSEE--ECGGGCSSCHHHHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----c------CCcEE--EecccccchHHHHHHHH-
Confidence 356888899986 8888899987643379999999987766542 1 43322 211 121112111
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEEe
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTIT 187 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~t 187 (252)
..+.+|.|+-.-.. ...++...+.|+++ |++++.-
T Consensus 258 t~gg~Dvvid~~g~--------------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 258 TNGGVDYAVECAGR--------------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp TTSCBSEEEECSCC--------------HHHHHHHHHTBCTTTCEEEECC
T ss_pred hCCCCCEEEECCCC--------------HHHHHHHHHHHhcCCCEEEEEc
Confidence 12368888754332 24788899999999 9998753
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.47 E-value=0.099 Score=46.02 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=60.9
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~~ 139 (252)
...||-+|+|. |..++.+|+......++++|.+++.++.+++ + +.+.+ +.. |..+.+.. +.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~~~~~~-~~ 258 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----V------GATEC--VNPQDYKKPIQEVLTE-MS 258 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T------TCSEE--ECGGGCSSCHHHHHHH-HT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----h------CCceE--ecccccchhHHHHHHH-Hh
Confidence 55788899987 8888899988643379999999987766542 1 33322 211 11111211 11
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~ 186 (252)
.+.+|.|+-.-.. ...++...+.|+++ |++++.
T Consensus 259 ~~g~D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 259 NGGVDFSFEVIGR--------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp TSCBSEEEECSCC--------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCCcEEEECCCC--------------HHHHHHHHHHhhcCCcEEEEe
Confidence 2368888755432 24788899999999 998874
No 335
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.46 E-value=0.09 Score=46.23 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=61.3
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYF 138 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~ 138 (252)
....||-+|+|. |.+++.+|+......++++|.+++.++.+++ + +.+.+ +.. |..+.+.. +
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~~~v~~-~ 256 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----F------GATEC--INPQDFSKPIQEVLIE-M 256 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----H------TCSEE--ECGGGCSSCHHHHHHH-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----c------CCceE--eccccccccHHHHHHH-H
Confidence 355788899886 8888889887633379999999987776643 2 33322 211 11111211 1
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEE
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTI 186 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~ 186 (252)
..+.+|.|+-.-.. ...++...+.|+++ |++++.
T Consensus 257 ~~~g~D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 257 TDGGVDYSFECIGN--------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp TTSCBSEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred hCCCCCEEEECCCc--------------HHHHHHHHHhhccCCcEEEEE
Confidence 12368888755432 24788899999999 999874
No 336
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.20 E-value=0.098 Score=46.15 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=63.0
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEE-EEeCCcccccCcc--CCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNIS-VVRTNSMKYIPNY--FEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~-~~~~da~~~l~~~--~~~~ 141 (252)
...||=+|+|. |.+++.+|+......++++|.++...+.+++ + +.+.+. .-..|..+.+... +..+
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~~vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----V------GATATVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----H------TCSEEECTTSSCHHHHHHSTTSSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----c------CCCEEECCCCcCHHHHHHhhhhccCC
Confidence 55788899987 8888999998744489999999987776643 2 333221 0012222222210 2234
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+|.|+-.... ...++.+.+.|++||++++.-
T Consensus 253 g~Dvvid~~G~--------------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECAGV--------------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECSCC--------------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEECCCC--------------HHHHHHHHHHhccCCEEEEEe
Confidence 68887754322 248889999999999998853
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.19 E-value=0.098 Score=46.09 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=60.5
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~~ 139 (252)
...||-+|+|. |.+++.+|+......++++|.+++.++.+++ + +.+.+ +.. |+.+.+... .
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l------Ga~~v--i~~~~~~~~~~~~v~~~-~ 262 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----L------GATDC--LNPRELDKPVQDVITEL-T 262 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T------TCSEE--ECGGGCSSCHHHHHHHH-H
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----h------CCcEE--EccccccchHHHHHHHH-h
Confidence 55788899986 8888899998743389999999987766542 1 43322 211 111112111 1
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~ 186 (252)
.+.+|.|+-.-.. ...++...+.|++| |++++.
T Consensus 263 ~~g~Dvvid~~G~--------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 263 AGGVDYSLDCAGT--------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp TSCBSEEEESSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCccEEEECCCC--------------HHHHHHHHHHhhcCCCEEEEE
Confidence 2367887754322 24788999999999 998864
No 338
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.12 E-value=0.15 Score=44.28 Aligned_cols=98 Identities=12% Similarity=0.057 Sum_probs=59.4
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCccc-EEEEeCCcccccCccCCCCc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQN-ISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~n-v~~~~~da~~~l~~~~~~~s 142 (252)
+...||=+|+|. |.++..+|+..-..+++++|.+++.++.+.+ + +.+. +..-..|..+.+.......-
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~------Ga~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----I------GADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----T------TCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----c------CCeEEEeCCCCCHHHHhhhhcCCCC
Confidence 355788899987 4566677777667899999999987665543 1 3322 22222233222222222233
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+|.++..-. ....+....+.|+++|++.+.
T Consensus 233 ~d~~~~~~~--------------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 233 VQSAIVCAV--------------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEEEECCS--------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred ceEEEEecc--------------CcchhheeheeecCCceEEEE
Confidence 555554322 235788899999999998774
No 339
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.11 E-value=0.075 Score=46.95 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=61.4
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-----CcccccCccCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-----NSMKYIPNYFE 139 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-----da~~~l~~~~~ 139 (252)
...||=+|+|. |.+++.+|+......++++|.+++.++.|++ .+.+. ++.. |..+.+.. +.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----------lGa~~--vi~~~~~~~~~~~~i~~-~~ 260 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----------FGVNE--FVNPKDHDKPIQEVIVD-LT 260 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----------TTCCE--EECGGGCSSCHHHHHHH-HT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----------cCCcE--EEccccCchhHHHHHHH-hc
Confidence 55788899985 8888899988643489999999987776542 14332 2221 11111221 12
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC-cEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG-GIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg-G~l~~~ 186 (252)
.+.+|.|+-.-.. +..++...+.|++| |++++.
T Consensus 261 ~gg~D~vid~~g~--------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 261 DGGVDYSFECIGN--------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp TSCBSEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCCEEEECCCC--------------HHHHHHHHHHhhccCCEEEEE
Confidence 3368888765433 24788999999997 998875
No 340
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.87 E-value=0.82 Score=39.88 Aligned_cols=128 Identities=13% Similarity=0.198 Sum_probs=72.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhh----cCC----C-------CcccEEEEeCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRV----SNP----G-------QYQNISVVRTNS 130 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~----~~~----~-------~~~nv~~~~~da 130 (252)
...||.+|||.......+...+++..++-||. ++.++.-++.+..... ... . ..++.+++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 46899999999999999999888888888887 7776665555443200 000 0 025799999998
Q ss_pred ccc------cCccCCCCcccEEEEe-CCCCccccccccccccCHHHHHHHHHhhcCCcEEE-EEeC-----chHHHHHHH
Q 025492 131 MKY------IPNYFEKGQLTKMFFL-FPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIY-TITD-----VEELGDWMR 197 (252)
Q Consensus 131 ~~~------l~~~~~~~s~d~i~~~-fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~-~~td-----~~~~~~~~~ 197 (252)
.+. +.... +.+...+++. ..-.+.... ....+++.+...+ |+|.++ +..- ...+...|.
T Consensus 177 ~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~------~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~ 248 (334)
T 1rjd_A 177 NDITETTRLLDVCT-KREIPTIVISECLLCYMHNN------ESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQ 248 (334)
T ss_dssp TCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHH------HHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHH
T ss_pred CCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHH------HHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHH
Confidence 641 12111 2233334331 111111111 1235777787776 677664 3221 224555566
Q ss_pred HHHhc
Q 025492 198 SCLEN 202 (252)
Q Consensus 198 ~~~~~ 202 (252)
..+..
T Consensus 249 ~~l~~ 253 (334)
T 1rjd_A 249 SNLKE 253 (334)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 66544
No 341
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.67 E-value=0.1 Score=45.45 Aligned_cols=96 Identities=13% Similarity=0.101 Sum_probs=61.0
Q ss_pred CceEEEEcCcc-cHHHHHHHHHC-CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc-ccccCccCCCCc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLF-PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS-MKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~-p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da-~~~l~~~~~~~s 142 (252)
...||-+|+|. |.+++.+|+.. |+..++++|.+++.++.+++ + +.+.+ +..+- .+.+...-....
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----l------Ga~~v--i~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----L------GADYV--SEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----H------TCSEE--ECHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----h------CCCEE--eccccchHHHHHhhcCCC
Confidence 55899999976 78888888874 46789999999987776643 2 33322 21110 011111111225
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+-.-..+ ..++.+.+.|++||++++..
T Consensus 239 ~D~vid~~g~~--------------~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVGTE--------------ETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSCCH--------------HHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCCCh--------------HHHHHHHHHhhcCCEEEEeC
Confidence 78877554322 37888899999999988753
No 342
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.66 E-value=0.088 Score=41.77 Aligned_cols=95 Identities=9% Similarity=0.044 Sum_probs=57.5
Q ss_pred CceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC--CcccccCccCCCC
Q 025492 66 KIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT--NSMKYIPNYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~--da~~~l~~~~~~~ 141 (252)
...||.+|+ |.|..+..++... +..++++|.+++..+.+.+ .+...+ +-.. +..+.+.......
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----------~g~~~~-~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSR----------LGVEYV-GDSRSVDFADEILELTDGY 106 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHT----------TCCSEE-EETTCSTHHHHHHHHTTTC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----------cCCCEE-eeCCcHHHHHHHHHHhCCC
Confidence 558999994 5577777777764 5689999999876554321 132211 1111 1111121112223
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+|.++-+-. + ..++.+.+.|++||++++..
T Consensus 107 ~~D~vi~~~g-~--------------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 107 GVDVVLNSLA-G--------------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CEEEEEECCC-T--------------HHHHHHHHTEEEEEEEEECS
T ss_pred CCeEEEECCc-h--------------HHHHHHHHHhccCCEEEEEc
Confidence 5888775432 1 37788999999999998764
No 343
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.43 E-value=0.99 Score=33.61 Aligned_cols=105 Identities=11% Similarity=0.049 Sum_probs=65.9
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCCCCc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~~~s 142 (252)
...|+=+|||. |..+...... .+..++++|.+++.++.+.+ ..+.++.+|+... +.. ..-..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~-------------~g~~~i~gd~~~~~~l~~-a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE-------------RGVRAVLGNAANEEIMQL-AHLEC 71 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH-------------TTCEEEESCTTSHHHHHH-TTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH-------------cCCCEEECCCCCHHHHHh-cCccc
Confidence 34688889875 4333333333 36789999999987654432 1356788887531 111 11246
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
.|.+++..|++-.. ..+-...+.+.|+..++....+..+.+.+
T Consensus 72 ad~vi~~~~~~~~n-----------~~~~~~a~~~~~~~~iiar~~~~~~~~~l 114 (140)
T 3fwz_A 72 AKWLILTIPNGYEA-----------GEIVASARAKNPDIEIIARAHYDDEVAYI 114 (140)
T ss_dssp CSEEEECCSCHHHH-----------HHHHHHHHHHCSSSEEEEEESSHHHHHHH
T ss_pred CCEEEEECCChHHH-----------HHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 78888887765311 23445677788999998888877766543
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.28 E-value=0.15 Score=44.44 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=60.5
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
...||-+|+|. |..++.+|+.. +. .++++|.+++.++.+++ + +.+.+ +.. |..+.+......
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~----~------Ga~~~--~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKK----V------GADYV--INPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHH----H------TCSEE--ECTTTSCHHHHHHHHTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----h------CCCEE--ECCCCcCHHHHHHHHcCC
Confidence 45799999975 88888888886 45 89999999887766542 2 33222 221 111112111112
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.|+-.-.. ...++.+.+.|+++|++++..
T Consensus 235 ~g~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 235 NGVDVFLEFSGA--------------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp SCEEEEEECSCC--------------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCC--------------HHHHHHHHHHHhcCCEEEEEc
Confidence 357887755432 247888899999999988753
No 345
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.25 E-value=0.12 Score=44.93 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=59.2
Q ss_pred CceEEEE-cCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADI-GCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDI-GcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
...||=+ |+|. |..++.+|+.. ++++++++.+++.++.+++ + +.+.+--...|..+.+... ....+
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~vi~~~~~~~~~~~~~-~~~g~ 218 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----M------GADIVLNHKESLLNQFKTQ-GIELV 218 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----H------TCSEEECTTSCHHHHHHHH-TCCCE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----c------CCcEEEECCccHHHHHHHh-CCCCc
Confidence 4578888 5654 88888888876 5699999999887766653 2 3332211111221122221 23457
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
|.|+-.... ...++.+.+.|+++|+++..
T Consensus 219 Dvv~d~~g~--------------~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 219 DYVFCTFNT--------------DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEESSCH--------------HHHHHHHHHHEEEEEEEEES
T ss_pred cEEEECCCc--------------hHHHHHHHHHhccCCEEEEE
Confidence 877654322 24678899999999999654
No 346
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.09 E-value=0.07 Score=46.45 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=44.1
Q ss_pred cEEEE-eCCcccccCccCCCCcccEEEEeCCCCccccc------cccccccCHHHHHHHHHhhcCCcEEEEEeCch
Q 025492 122 NISVV-RTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEK------NHRRRVISPHLLDEYAYVLGVGGIIYTITDVE 190 (252)
Q Consensus 122 nv~~~-~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~------h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~ 190 (252)
...++ ++|+.+.+. .++++++|.|++..| .... +..---.....+.++.++|+|||.+++..++.
T Consensus 38 ~~~l~i~gD~l~~L~-~l~~~svDlI~tDPP---Y~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLA-KLPDDSVQLIICDPP---YNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEEECCHHHHHH-TSCTTCEEEEEECCC---SBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cceEEECCcHHHHHH-hCccCCcCEEEECCC---CCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 35677 999987664 467789999998654 2111 00000012357788899999999999998865
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.08 E-value=0.26 Score=42.60 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=59.4
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe--CCcccccCccCCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR--TNSMKYIPNYFEKG 141 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~--~da~~~l~~~~~~~ 141 (252)
+...||=+|+|. |.+++.+|+......++++|.+++.++.|++ + +.+.+ +.. .|..+.....-...
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----l------Ga~~~-i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----F------GAMQT-FNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T------TCSEE-EETTTSCHHHHHHHHGGGC
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----c------CCeEE-EeCCCCCHHHHHHhhcccC
Confidence 356788889986 6677788888766678999999987766643 1 43321 111 12211111111123
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
-+|.|+-.-. ....++...+.|++||++.+.-
T Consensus 229 g~d~v~d~~G--------------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 229 FNQLILETAG--------------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SSEEEEECSC--------------SHHHHHHHHHHCCTTCEEEECC
T ss_pred Cccccccccc--------------ccchhhhhhheecCCeEEEEEe
Confidence 3555554322 2358889999999999998753
No 348
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.02 E-value=0.33 Score=41.82 Aligned_cols=120 Identities=12% Similarity=0.073 Sum_probs=70.5
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKMF 147 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i~ 147 (252)
.|||+=||.|.+...+-+.. -..+.++|+++.+++.-+.|. + -.++.+|+.+.-...++ .+|.++
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~-----------~-~~~~~~DI~~i~~~~~~--~~D~l~ 66 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNH-----------S-AKLIKGDISKISSDEFP--KCDGII 66 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHC-----------C-SEEEESCGGGCCGGGSC--CCSEEE
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHC-----------C-CCcccCChhhCCHhhCC--cccEEE
Confidence 48999999999999888773 235679999998765433321 1 25678998753222233 589998
Q ss_pred EeCCCCccccccccccccC--HHHHHHHH---HhhcCCcEEEEEeC--------chHHHHHHHHHHhcCC
Q 025492 148 FLFPDPHFKEKNHRRRVIS--PHLLDEYA---YVLGVGGIIYTITD--------VEELGDWMRSCLENHP 204 (252)
Q Consensus 148 ~~fpdP~~k~~h~krr~~~--~~~l~~~~---~~LkpgG~l~~~td--------~~~~~~~~~~~~~~~~ 204 (252)
.-+|..-+.....++.+-. ..++.++. +.++|.- ++.-+ ....+..+.+.+.+.+
T Consensus 67 ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~--~~~ENV~gl~~~~~~~~~~~i~~~l~~~G 134 (331)
T 3ubt_Y 67 GGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIF--FLAENVKGMMAQRHNKAVQEFIQEFDNAG 134 (331)
T ss_dssp CCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSE--EEEEECCGGGGCTTSHHHHHHHHHHHHHT
T ss_pred ecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeE--EEeeeecccccccccchhhhhhhhhccCC
Confidence 8887554432221111111 12443333 4456753 23222 2356677777776654
No 349
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.94 E-value=0.32 Score=43.27 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=60.0
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~~ 141 (252)
...||=+|+|. |.+++.+|+......++++|.++..++.+++ + +.+. ++.. |..+.+.......
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----l------Ga~~--vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----L------GADH--VIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----H------TCSE--EECTTTSCHHHHHHHHTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----c------CCCE--EEcCCCCCHHHHHHHHhCCC
Confidence 55788899976 8888899988744489999999988776653 2 3322 2221 2221222222233
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhh----cCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVL----GVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~L----kpgG~l~~~ 186 (252)
.+|.|+-.-..+. ..+..+.+.| ++||++++.
T Consensus 282 g~D~vid~~g~~~-------------~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLEATGVPQ-------------LVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEECSSCHH-------------HHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEECCCCcH-------------HHHHHHHHHHHhccCCCcEEEEe
Confidence 5888876543321 2556666666 999999875
No 350
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.94 E-value=0.16 Score=44.10 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=60.4
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
....||=+|+ |.|..++.+|+.. +..+++++.+++..+.+++ + +.+.+.-...+..+.+........
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------ga~~v~~~~~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----V------GADIVLPLEEGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----H------TCSEEEESSTTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----c------CCcEEecCchhHHHHHHHHhCCCC
Confidence 3568999997 5588888999886 5699999999887766543 2 333221111222222222222235
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+-+-.. ..+....+.|++||++++.-
T Consensus 228 ~Dvvid~~g~---------------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 228 VDMVVDPIGG---------------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEEESCC-----------------CHHHHHHTEEEEEEEEEC-
T ss_pred ceEEEECCch---------------hHHHHHHHhhcCCCEEEEEE
Confidence 8887755432 24667888999999998753
No 351
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.70 E-value=0.22 Score=43.18 Aligned_cols=95 Identities=14% Similarity=0.043 Sum_probs=60.7
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
....||-+|+ |.|..++.+|+.. +..+++++.+++.++.+.+ + +...+ +.. +..+.+.....
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~------ga~~~--~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----L------GADET--VNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----H------TCSEE--EETTSTTHHHHHHHHTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----c------CCCEE--EcCCcccHHHHHHHHhC
Confidence 3568999998 6788889999886 5689999999887766542 2 33222 221 11111211122
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+|.++-+-. + ..++.+.+.|+++|++++..
T Consensus 233 ~~~~d~vi~~~g-~--------------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A--------------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S--------------SSHHHHHHHEEEEEEEEESS
T ss_pred CCCceEEEECCC-H--------------HHHHHHHHhhccCCEEEEEe
Confidence 236788775543 2 15677888999999988753
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.66 E-value=0.12 Score=44.98 Aligned_cols=95 Identities=11% Similarity=0.137 Sum_probs=59.4
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe-C---CcccccCccC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR-T---NSMKYIPNYF 138 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~-~---da~~~l~~~~ 138 (252)
+...||-+|+ |.|..++.+|+.. +..++++|.+++..+.+++ + +... ++. . +..+.+....
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~------g~~~--~~d~~~~~~~~~~~~~~~ 235 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----I------GGEV--FIDFTKEKDIVGAVLKAT 235 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----T------TCCE--EEETTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----c------CCce--EEecCccHhHHHHHHHHh
Confidence 3568999999 5688888888875 5689999999876655432 1 3221 122 1 1111111111
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+.+|.++-+-.. ...++.+.+.|+++|++++..
T Consensus 236 -~~~~D~vi~~~g~--------------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 236 -DGGAHGVINVSVS--------------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp -TSCEEEEEECSSC--------------HHHHHHHTTSEEEEEEEEECC
T ss_pred -CCCCCEEEECCCc--------------HHHHHHHHHHHhcCCEEEEEe
Confidence 1257877755432 247888899999999988753
No 353
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.52 E-value=0.089 Score=44.13 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=46.7
Q ss_pred EEEEeCCcccccCccCCCCcccEEEEeCCCCccccccc------cccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 123 ISVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNH------RRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 123 v~~~~~da~~~l~~~~~~~s~d~i~~~fpdP~~k~~h~------krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
.+++++|+.+.+. .++++++|.|++..|=........ .-.-.....++++.++|+|||.+++..+.... ..+
T Consensus 5 ~~l~~gD~~~~l~-~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~~~-~~~ 82 (260)
T 1g60_A 5 NKIHQMNCFDFLD-QVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNC-AFI 82 (260)
T ss_dssp SSEEECCHHHHHH-HSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHHH-HHH
T ss_pred CeEEechHHHHHH-hccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcHHH-HHH
Confidence 4578999876664 366789999998654221100000 00001245788889999999999998654332 333
Q ss_pred HHHHhcC
Q 025492 197 RSCLENH 203 (252)
Q Consensus 197 ~~~~~~~ 203 (252)
...+.+.
T Consensus 83 ~~~~~~~ 89 (260)
T 1g60_A 83 CQYLVSK 89 (260)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 3344433
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.50 E-value=0.12 Score=45.18 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=57.8
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcc-cccCccCCCCc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSM-KYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~-~~l~~~~~~~s 142 (252)
....||-+|+|. |.+++.+|+.. +..++++|.++..++.+++ + +.+.+ +..+-. +.... +. +.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~v--~~~~~~~~~~~~-~~-~~ 243 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----M------GADHY--IATLEEGDWGEK-YF-DT 243 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----H------TCSEE--EEGGGTSCHHHH-SC-SC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----c------CCCEE--EcCcCchHHHHH-hh-cC
Confidence 356899999875 88888888875 5579999999887766653 2 33322 221110 11111 11 46
Q ss_pred ccEEEEeCCC--CccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 143 LTKMFFLFPD--PHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 143 ~d~i~~~fpd--P~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+|.|+-.... +- .++.+.+.|++||++++.
T Consensus 244 ~D~vid~~g~~~~~--------------~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSLTDI--------------DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCSTTC--------------CTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCCcHH--------------HHHHHHHHhcCCCEEEEe
Confidence 7888765543 21 344566788999988764
No 355
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.48 E-value=0.16 Score=44.47 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=58.7
Q ss_pred ceEEEEcCcc-cHHH-HHHH-HHCCCCe-EEEEecCHh---HHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC
Q 025492 67 IQFADIGCGF-GGLL-ISLS-TLFPEVL-MIGMELRDK---VTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE 139 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~-~~lA-~~~p~~~-~iGiDis~~---~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~ 139 (252)
..||=+|+|. |.++ +.+| +.. +.. ++++|.+++ ..+.+++ + +.+.+..-..|..+ +...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~----l------Ga~~v~~~~~~~~~-i~~~-- 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE----L------DATYVDSRQTPVED-VPDV-- 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH----T------TCEEEETTTSCGGG-HHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH----c------CCcccCCCccCHHH-HHHh--
Confidence 6899999865 7778 8888 765 455 999999887 6666542 2 44433000112222 2221
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+.+|.|+-.... ...++.+.+.|++||++++..
T Consensus 240 ~gg~Dvvid~~g~--------------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 240 YEQMDFIYEATGF--------------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp SCCEEEEEECSCC--------------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC--------------hHHHHHHHHHHhcCCEEEEEe
Confidence 2367877654322 237888999999999998753
No 356
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.41 E-value=0.23 Score=42.81 Aligned_cols=95 Identities=11% Similarity=0.053 Sum_probs=58.4
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC---cccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN---SMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d---a~~~l~~~~~ 139 (252)
....||-+|| |.|..+..+++.. +..++++|.+++.++.+++ + +.. ..+-..+ ..+.+....
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~------g~~-~~~d~~~~~~~~~~~~~~~- 211 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ----I------GFD-AAFNYKTVNSLEEALKKAS- 211 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TCS-EEEETTSCSCHHHHHHHHC-
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----c------CCc-EEEecCCHHHHHHHHHHHh-
Confidence 3568999998 5677778888775 5689999999877665521 1 222 1111111 111121111
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.+.+|.++-+-.. ..++...+.|++||++++..
T Consensus 212 ~~~~d~vi~~~g~---------------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 PDGYDCYFDNVGG---------------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp TTCEEEEEESSCH---------------HHHHHHHTTEEEEEEEEECC
T ss_pred CCCCeEEEECCCh---------------HHHHHHHHHHhcCCEEEEEe
Confidence 2467877654321 35778889999999998753
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.10 E-value=0.22 Score=43.22 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=59.4
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
....||-+|+|. |..++.+|+.. +.+++++|.++..++.+++ + +.+.+ +.. |..+.+....
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~~--~d~~~~~~~~~~~~~~-- 228 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----L------GADLV--VNPLKEDAAKFMKEKV-- 228 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----T------TCSEE--ECTTTSCHHHHHHHHH--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----C------CCCEE--ecCCCccHHHHHHHHh--
Confidence 356899999974 88888888886 5699999999987766542 1 33321 211 1111111111
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+.+|.|+-.-.. ...++...+.|+++|++++.
T Consensus 229 ~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTAVS--------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC--------------HHHHHHHHHHhhcCCEEEEe
Confidence 357777654332 24788889999999998874
No 358
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.98 E-value=0.2 Score=43.44 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
+...||-+|+ |.|..++.+|+.. ++++++++.+++.++.+.+. .+...+ +-.. +..+.+....
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~---------~g~~~~-~d~~~~~~~~~~~~~~~- 222 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTK---------FGFDDA-FNYKEESDLTAALKRCF- 222 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---------SCCSEE-EETTSCSCSHHHHHHHC-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---------cCCceE-EecCCHHHHHHHHHHHh-
Confidence 3568999998 5688888888876 56899999998766554321 133221 1111 1111121111
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.+.+|.++-+-. ...++...+.|++||++++.
T Consensus 223 ~~~~d~vi~~~g---------------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 PNGIDIYFENVG---------------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TTCEEEEEESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCCcEEEECCC---------------HHHHHHHHHHHhcCCEEEEE
Confidence 245787765432 13778888999999999875
No 359
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.96 E-value=0.14 Score=44.54 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=59.1
Q ss_pred CCceEEEEcCc--ccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC--cccccCccCCC
Q 025492 65 KKIQFADIGCG--FGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN--SMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG--~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d--a~~~l~~~~~~ 140 (252)
+...||-+|+| .|..++.+|+...+.+++++|.+++.++.+++ + +.+.+ +...+ ..+.+......
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~------g~~~~-~~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A------GADYV-INASMQDPLAEIRRITES 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H------TCSEE-EETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----h------CCCEE-ecCCCccHHHHHHHHhcC
Confidence 35689999998 56777788877535689999999987766532 2 32211 11111 11011111111
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+.+|.++-+-.. ...++...+.|+++|++++.
T Consensus 239 ~~~d~vi~~~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 239 KGVDAVIDLNNS--------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp SCEEEEEESCCC--------------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCceEEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 467877654332 13677788899999998875
No 360
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.89 E-value=0.099 Score=45.39 Aligned_cols=96 Identities=18% Similarity=0.164 Sum_probs=59.1
Q ss_pred CCceEEEEcCc--ccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEe--CCcccccCccCCC
Q 025492 65 KKIQFADIGCG--FGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVR--TNSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGcG--~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~--~da~~~l~~~~~~ 140 (252)
....||-+|+| .|..++.+|+.. +++++++|.+++.++.+++ + +.+.+ +.. .|..+.+......
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----l------ga~~~-~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----L------GAAYV-IDTSTAPLYETVMELTNG 211 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----H------TCSEE-EETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----C------CCcEE-EeCCcccHHHHHHHHhCC
Confidence 35689999987 588888888875 5689999999887766653 2 33221 111 1221112222223
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.++-+-.. ..+....+.|++||++++.-
T Consensus 212 ~g~Dvvid~~g~---------------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 212 IGADAAIDSIGG---------------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SCEEEEEESSCH---------------HHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCCC---------------hhHHHHHHHhcCCCEEEEEe
Confidence 467877754322 23344558999999998863
No 361
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.92 E-value=0.28 Score=42.33 Aligned_cols=96 Identities=9% Similarity=0.055 Sum_probs=60.1
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC--CcccccCccCCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT--NSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~--da~~~l~~~~~~ 140 (252)
+...||-+|+ |.|..++.+|+.. +.++++++.+++.++.+.+. .+.+.+ +... |..+.+.... .
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~---------~g~~~~-~~~~~~~~~~~~~~~~-~ 216 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEE---------LGFDGA-IDYKNEDLAAGLKREC-P 216 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---------TCCSEE-EETTTSCHHHHHHHHC-T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---------cCCCEE-EECCCHHHHHHHHHhc-C
Confidence 3568999998 5688888888876 56999999998876655221 133221 1111 1111111111 3
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+.+|.++-+-. ...+....+.|++||++++..
T Consensus 217 ~~~d~vi~~~g---------------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 217 KGIDVFFDNVG---------------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TCEEEEEESSC---------------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCC---------------cchHHHHHHHHhhCCEEEEEe
Confidence 45777765432 147888899999999998754
No 362
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=90.81 E-value=0.12 Score=56.68 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=48.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-----CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCC
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-----EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-----~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~ 140 (252)
.-.|||||.|+|..+..+..... ...|+-.|+|+...+.|++++..+ ++..-..|... +..+.+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------di~~~~~d~~~--~~~~~~ 1309 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------HVTQGQWDPAN--PAPGSL 1309 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------TEEEECCCSSC--CCC---
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------ccccccccccc--cccCCC
Confidence 34899999999987766555432 236888899988776666655332 12221122211 012345
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.++|.|+....- |.... ....+..+.++|||||.+++..
T Consensus 1310 ~~ydlvia~~vl------~~t~~--~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1310 GKADLLVCNCAL------ATLGD--PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp --CCEEEEECC----------------------------CCEEEEEE
T ss_pred CceeEEEEcccc------ccccc--HHHHHHHHHHhcCCCcEEEEEe
Confidence 678988865321 11000 1247889999999999988864
No 363
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.39 E-value=0.35 Score=41.28 Aligned_cols=87 Identities=13% Similarity=0.085 Sum_probs=55.9
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
....||=+|+|. |.+++.+|+.. ++++++++ +++..+.+++ + +.+.+ +. | .+.+ ...+
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----l------Ga~~v--~~-d-~~~v-----~~g~ 200 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----R------GVRHL--YR-E-PSQV-----TQKY 200 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----H------TEEEE--ES-S-GGGC-----CSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----c------CCCEE--Ec-C-HHHh-----CCCc
Confidence 356899999975 88889999886 56999999 8877766643 2 44332 22 4 2222 4567
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|.|+-....+ .+....+.|+++|++++..
T Consensus 201 Dvv~d~~g~~---------------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVNSQ---------------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC----------------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCCch---------------hHHHHHHHhcCCCEEEEEe
Confidence 7776433222 2355678899999998864
No 364
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=90.37 E-value=0.8 Score=39.61 Aligned_cols=107 Identities=6% Similarity=0.007 Sum_probs=61.5
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
+|-=||||. |. +.+...+..|+..++| +|.+++..+...+ +. +.++ ...|..+. +.+..+|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~------g~~~---~y~d~~el----l~~~~iD 88 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMAD---RF------SVPH---AFGSYEEM----LASDVID 88 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHH---HH------TCSE---EESSHHHH----HHCSSCS
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH---Hc------CCCe---eeCCHHHH----hcCCCCC
Confidence 677899996 53 3445556678888886 5888875443332 22 4332 34565543 3456899
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
.|++.-|+.. -.+.+...|+-|=.+++- +.+.+-++.|.+...+.+
T Consensus 89 aV~I~tP~~~--------------H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~ 137 (350)
T 4had_A 89 AVYIPLPTSQ--------------HIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNK 137 (350)
T ss_dssp EEEECSCGGG--------------HHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHT
T ss_pred EEEEeCCCch--------------hHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcC
Confidence 9999887765 223344455555445442 223334455555555443
No 365
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.37 E-value=0.59 Score=40.88 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=57.8
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCH---hHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRD---KVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKG 141 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~---~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~ 141 (252)
...||-+|+|. |..++.+|+.. +..++++|.++ +.++.+++ + +.+.+ - ..|..+.+.. . ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~----~------ga~~v-~-~~~~~~~~~~-~-~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEE----T------KTNYY-N-SSNGYDKLKD-S-VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHH----H------TCEEE-E-CTTCSHHHHH-H-HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHH----h------CCcee-c-hHHHHHHHHH-h-CC
Confidence 56899999864 66777777765 45899999987 66555432 2 33333 1 1121111211 1 14
Q ss_pred cccEEEEeCCCCccccccccccccCHHHH-HHHHHhhcCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLL-DEYAYVLGVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l-~~~~~~LkpgG~l~~~ 186 (252)
.+|.|+-+-..+. .+ +.+.+.|+++|++++.
T Consensus 246 ~~d~vid~~g~~~--------------~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 246 KFDVIIDATGADV--------------NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CEEEEEECCCCCT--------------HHHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCCChH--------------HHHHHHHHHHhcCCEEEEE
Confidence 5788876654432 56 8889999999998875
No 366
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=90.35 E-value=2.5 Score=36.21 Aligned_cols=106 Identities=10% Similarity=0.033 Sum_probs=63.1
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |...+......|+..+++ +|.+++..+...+ . .+ +. ..|..+.+ .+..+|.
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~---~------~~---~~--~~~~~~~l----~~~~~D~ 66 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAG---A------YG---CE--VRTIDAIE----AAADIDA 66 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH---H------TT---CE--ECCHHHHH----HCTTCCE
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHH---H------hC---CC--cCCHHHHh----cCCCCCE
Confidence 577799987 544444444567888875 7988875433222 1 13 33 45554433 3457899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|++.-|+.. -.+.+...|+.|-.+++. +.+.+-...+.+...+.+.
T Consensus 67 V~i~tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 115 (331)
T 4hkt_A 67 VVICTPTDT--------------HADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKA 115 (331)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred EEEeCCchh--------------HHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence 999877655 334445566767666652 3445566667776666554
No 367
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.32 E-value=2.9 Score=32.31 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=59.6
Q ss_pred ceEEEEcCcccHHHHHHHHH--CC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCC
Q 025492 67 IQFADIGCGFGGLLISLSTL--FP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKG 141 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~--~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~ 141 (252)
..|+=+|||. ++..+|+. .. +..|+++|.+++.++.+.. . .+.++.+|+.+ .+.....-.
T Consensus 40 ~~v~IiG~G~--~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----------~---g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 40 AQVLILGMGR--IGTGAYDELRARYGKISLGIEIREEAAQQHRS----------E---GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----------T---TCCEEECCTTCHHHHHTBCSCC
T ss_pred CcEEEECCCH--HHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----------C---CCCEEEcCCCCHHHHHhccCCC
Confidence 3577788864 44433332 12 5689999999976544321 1 24466666532 122110123
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHH
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDW 195 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 195 (252)
..|.|++..|++.. + ..+-...+.+.|++.++..+......+.
T Consensus 105 ~ad~vi~~~~~~~~----------~-~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 147 (183)
T 3c85_A 105 HVKLVLLAMPHHQG----------N-QTALEQLQRRNYKGQIAAIAEYPDQLEG 147 (183)
T ss_dssp CCCEEEECCSSHHH----------H-HHHHHHHHHTTCCSEEEEEESSHHHHHH
T ss_pred CCCEEEEeCCChHH----------H-HHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 57888887776431 1 2333456667788899888887666553
No 368
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=90.08 E-value=0.27 Score=42.49 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=65.7
Q ss_pred ceEEEEcCcccHHHHHHHHHCC-CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccC-----ccCCC
Q 025492 67 IQFADIGCGFGGLLISLSTLFP-EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIP-----NYFEK 140 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p-~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~-----~~~~~ 140 (252)
..||+||||-=.....+. .| +..|+-|| .+..++..++.+... ......+..++.+|+.+.+. ..|..
T Consensus 104 ~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~---~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEH---GVTPTADRREVPIDLRQDWPPALRSAGFDP 177 (310)
T ss_dssp CEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHT---TCCCSSEEEEEECCTTSCHHHHHHHTTCCT
T ss_pred CeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhc---CCCCCCCeEEEecchHhhHHHHHHhccCCC
Confidence 379999999877655544 24 47899999 588887776666432 11234678999999864211 11211
Q ss_pred CcccEEEEeCC-CCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCc
Q 025492 141 GQLTKMFFLFP-DPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDV 189 (252)
Q Consensus 141 ~s~d~i~~~fp-dP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~ 189 (252)
+...+++.-. -.+.... ....+++.+...+.||+.|.+..-.
T Consensus 178 -~~Pt~~i~Egvl~Yl~~~------~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 178 -SARTAWLAEGLLMYLPAT------AQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp -TSCEEEEECSCGGGSCHH------HHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred -CCCEEEEEechHhhCCHH------HHHHHHHHHHHhCCCCeEEEEEecC
Confidence 2233332110 0010000 1135899999989999999987543
No 369
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.75 E-value=1.6 Score=39.20 Aligned_cols=103 Identities=12% Similarity=0.009 Sum_probs=67.2
Q ss_pred ceEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCCCCc
Q 025492 67 IQFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFEKGQ 142 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~~~s 142 (252)
..|+=+|||. ++..+|+. ..+..|++||.+++.++.+.. . .+.++.+|+... |.. ..-..
T Consensus 5 ~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----------~---g~~vi~GDat~~~~L~~-agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRK----------F---GMKVFYGDATRMDLLES-AGAAK 68 (413)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----------T---TCCCEESCTTCHHHHHH-TTTTT
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----------C---CCeEEEcCCCCHHHHHh-cCCCc
Confidence 4678888865 44444433 136789999999988765432 1 356788998641 211 12346
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
.|.|++..+++.. ...+...++.+.|+..++..+.+......+
T Consensus 69 A~~viv~~~~~~~-----------n~~i~~~ar~~~p~~~Iiara~~~~~~~~L 111 (413)
T 3l9w_A 69 AEVLINAIDDPQT-----------NLQLTEMVKEHFPHLQIIARARDVDHYIRL 111 (413)
T ss_dssp CSEEEECCSSHHH-----------HHHHHHHHHHHCTTCEEEEEESSHHHHHHH
T ss_pred cCEEEECCCChHH-----------HHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 7888888877542 246667778888998888888776655443
No 370
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.52 E-value=1.2 Score=35.75 Aligned_cols=102 Identities=7% Similarity=0.007 Sum_probs=62.2
Q ss_pred EEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCCCCccc
Q 025492 69 FADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFEKGQLT 144 (252)
Q Consensus 69 vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~~~s~d 144 (252)
|+=+|+ |.++..+|+.. .+..++++|.+++.++...+ . .++.++.+|+... +.. ..-...|
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~---------~~~~~i~gd~~~~~~l~~-a~i~~ad 67 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---K---------LKATIIHGDGSHKEILRD-AEVSKND 67 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---H---------SSSEEEESCTTSHHHHHH-HTCCTTC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---H---------cCCeEEEcCCCCHHHHHh-cCcccCC
Confidence 555665 66666666642 36789999999986653221 1 1366888887531 111 1124678
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHH
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWM 196 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~ 196 (252)
.|++..+++-. ..++..+++.+.+...++..+.+..+.+.+
T Consensus 68 ~vi~~~~~d~~-----------n~~~~~~a~~~~~~~~iia~~~~~~~~~~l 108 (218)
T 3l4b_C 68 VVVILTPRDEV-----------NLFIAQLVMKDFGVKRVVSLVNDPGNMEIF 108 (218)
T ss_dssp EEEECCSCHHH-----------HHHHHHHHHHTSCCCEEEECCCSGGGHHHH
T ss_pred EEEEecCCcHH-----------HHHHHHHHHHHcCCCeEEEEEeCcchHHHH
Confidence 88887776532 135666666677777777777666655433
No 371
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.36 E-value=1.2 Score=40.92 Aligned_cols=82 Identities=12% Similarity=0.087 Sum_probs=53.0
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC-------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF------- 138 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~------- 138 (252)
.-.+||+-||.|.+...+.+.. ...+.++|+++.+++.-+.+. ...++..++.+|+.+......
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~--------~~~p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANH--------YCDPATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHS--------CCCTTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhc--------ccCCCcceeccchhhhhhccccccchhh
Confidence 4589999999999999988773 234799999997765433322 112345567788865321100
Q ss_pred -------CCCcccEEEEeCCCCccc
Q 025492 139 -------EKGQLTKMFFLFPDPHFK 156 (252)
Q Consensus 139 -------~~~s~d~i~~~fpdP~~k 156 (252)
....+|.|+.-+|..-+.
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECCCCCC-
T ss_pred HHhhhhhcCCCCCEEEecCCCcchh
Confidence 013579999888866443
No 372
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=89.36 E-value=4.4 Score=35.04 Aligned_cols=108 Identities=12% Similarity=0.100 Sum_probs=63.8
Q ss_pred ceEEEEcCcc-cH-HHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GG-LLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~-~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |. ..+......|+..+++| |.+++..+...+ .. +. ... .|..+. +.+..+
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---~~------g~---~~~-~~~~~l----l~~~~~ 90 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTE---RF------GG---EPV-EGYPAL----LERDDV 90 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHH---HH------CS---EEE-ESHHHH----HTCTTC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHH---Hc------CC---CCc-CCHHHH----hcCCCC
Confidence 3688899985 44 23333445678887755 888765433222 22 33 232 555443 335678
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+.
T Consensus 91 D~V~i~tp~~~--------------h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~ 141 (350)
T 3rc1_A 91 DAVYVPLPAVL--------------HAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGL 141 (350)
T ss_dssp SEEEECCCGGG--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCcHH--------------HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999877654 334455667777666653 3345566667777766654
No 373
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.25 E-value=1.1 Score=39.29 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=56.5
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...||=+|+|. |..++.+|+.. +..+++++.+++.++.+.+. .+.+. ++..+-.+.+.... +.+|
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~---------lGa~~--v~~~~~~~~~~~~~--~~~D 253 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKN---------FGADS--FLVSRDQEQMQAAA--GTLD 253 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHT---------SCCSE--EEETTCHHHHHHTT--TCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh---------cCCce--EEeccCHHHHHHhh--CCCC
Confidence 45778899876 77788888876 56899999998766554321 13332 22211111122111 3578
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+-.-..+. .++...+.|+++|++++.
T Consensus 254 ~vid~~g~~~--------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSAVH--------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEECCSSCC--------------CSHHHHHHEEEEEEEEEC
T ss_pred EEEECCCcHH--------------HHHHHHHHHhcCCEEEEE
Confidence 8876554332 345667788999988775
No 374
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=88.98 E-value=0.42 Score=36.18 Aligned_cols=42 Identities=17% Similarity=0.293 Sum_probs=33.5
Q ss_pred CCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 138 FEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 138 ~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
++++++|.|++.-|..- ..+.+.+.++..+...|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~------~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ------TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS------CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc------chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 67899999998765442 1234567899999999999999996
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.93 E-value=0.53 Score=40.37 Aligned_cols=96 Identities=8% Similarity=0.039 Sum_probs=58.5
Q ss_pred CCceEEEEc--CcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC--cccccCccCCC
Q 025492 65 KKIQFADIG--CGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN--SMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIG--cG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d--a~~~l~~~~~~ 140 (252)
....||-+| .|.|..+..+|+.. +..++++|.+++.++.+.+ + +...+ +-..+ ..+.+......
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~------g~~~~-~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----A------GAWQV-INYREEDLVERLKEITGG 207 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----H------TCSEE-EETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----c------CCCEE-EECCCccHHHHHHHHhCC
Confidence 356899999 45677888888775 5689999999877665543 2 22211 11111 11111111222
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.++-+-. + ..++.+.+.|++||++++..
T Consensus 208 ~~~D~vi~~~g-~--------------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 208 KKVRVVYDSVG-R--------------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CCEEEEEECSC-G--------------GGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCc-h--------------HHHHHHHHHhcCCCEEEEEe
Confidence 35787765543 1 26778889999999988753
No 376
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.92 E-value=0.94 Score=39.21 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=58.2
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
....||=+|+ |.|..++.+|+.. +++++++ .+++.++.+++ + +.+.+. ...|..+.+........
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~----l------Ga~~i~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRD----L------GATPID-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHH----H------TSEEEE-TTSCHHHHHHHHHTTSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHH----c------CCCEec-cCCCHHHHHHHHhcCCC
Confidence 3568999994 4588888888876 5689999 88877665542 2 433221 11122111211112245
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+|.|+-+-.. ..+....+.|+++|++++.
T Consensus 217 ~D~vid~~g~---------------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 217 FDLVYDTLGG---------------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEEESSCT---------------HHHHHHHHHEEEEEEEEES
T ss_pred ceEEEECCCc---------------HHHHHHHHHHhcCCeEEEE
Confidence 7877654321 3788888999999999874
No 377
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=88.80 E-value=4.5 Score=36.29 Aligned_cols=78 Identities=12% Similarity=0.119 Sum_probs=44.9
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCCC
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEKG 141 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~~ 141 (252)
-.|.=||||. |..-+......|+..+++ +|.+++..+.+.+.+... +.+.+.+... |..+ .+.+.
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~------g~~~~~~~~~~~~~~~~----ll~~~ 90 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKN------GKKPAKVFGNGNDDYKN----MLKDK 90 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHT------TCCCCEEECSSTTTHHH----HTTCT
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhc------CCCCCceeccCCCCHHH----HhcCC
Confidence 3688899984 332222333457777654 588887665554433221 4433444432 5443 34455
Q ss_pred cccEEEEeCCCCc
Q 025492 142 QLTKMFFLFPDPH 154 (252)
Q Consensus 142 s~d~i~~~fpdP~ 154 (252)
.+|.|++.-|+.+
T Consensus 91 ~vD~V~i~tp~~~ 103 (444)
T 2ixa_A 91 NIDAVFVSSPWEW 103 (444)
T ss_dssp TCCEEEECCCGGG
T ss_pred CCCEEEEcCCcHH
Confidence 7999999877654
No 378
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.42 E-value=0.52 Score=41.06 Aligned_cols=95 Identities=13% Similarity=0.169 Sum_probs=58.0
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC---cccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN---SMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d---a~~~l~~~~~ 139 (252)
....||-+|+ |.|..++.+|+.. ++.+++++.+++.++.+++ + +... ++..+ ..+.+.....
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------ga~~--~~d~~~~~~~~~~~~~~~ 236 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQ----N------GAHE--VFNHREVNYIDKIKKYVG 236 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TCSE--EEETTSTTHHHHHHHHHC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHH----c------CCCE--EEeCCCchHHHHHHHHcC
Confidence 3568999997 5578888888875 5689999999887664432 1 3221 12211 1111111112
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+|.++-+-. ...+....+.|+++|++++..
T Consensus 237 ~~~~D~vi~~~G---------------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLA---------------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCH---------------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCC---------------hHHHHHHHHhccCCCEEEEEe
Confidence 235777765432 135677889999999988753
No 379
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.40 E-value=0.46 Score=40.83 Aligned_cols=96 Identities=9% Similarity=0.025 Sum_probs=59.7
Q ss_pred CCceEEEEc-C-cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC--CcccccCccCCC
Q 025492 65 KKIQFADIG-C-GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT--NSMKYIPNYFEK 140 (252)
Q Consensus 65 ~~~~vLDIG-c-G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~--da~~~l~~~~~~ 140 (252)
+...||=+| + |.|..++.+|+.. +.++++++.+++.++.+++ + +.+.+ +... |..+.+......
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------Ga~~~-~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----L------GAWET-IDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----H------TCSEE-EETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCCEE-EeCCCccHHHHHHHHhCC
Confidence 356899898 3 4588888888875 5689999999987776643 2 32211 1111 111112222223
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.|+-+-.. ..+....+.|++||++++.-
T Consensus 208 ~g~Dvvid~~g~---------------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYDGVGQ---------------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CCEEEEEESSCG---------------GGHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCCh---------------HHHHHHHHHhcCCCEEEEEe
Confidence 467877654322 26678889999999998863
No 380
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.32 E-value=0.51 Score=40.65 Aligned_cols=94 Identities=13% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
+...||-+|+ |.|..++.+|+.. +.++++++.+++.++.+++ + +.+. ++.. |..+.+.....
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------ga~~--~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----Y------GAEY--LINASKEDILRQVLKFTN 214 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TCSE--EEETTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCcE--EEeCCCchHHHHHHHHhC
Confidence 3568999994 4588888888876 5689999999887765542 1 3221 2221 11111211122
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
...+|.++-+-.. ..++.+.+.|++||++++.
T Consensus 215 ~~g~D~vid~~g~---------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 215 GKGVDASFDSVGK---------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TSCEEEEEECCGG---------------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCceEEEECCCh---------------HHHHHHHHHhccCCEEEEE
Confidence 3457877654322 2677888999999999875
No 381
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.21 E-value=0.55 Score=39.79 Aligned_cols=89 Identities=11% Similarity=0.098 Sum_probs=56.9
Q ss_pred CceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc-ccccCccCCCCc
Q 025492 66 KIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS-MKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da-~~~l~~~~~~~s 142 (252)
...||-+|+ |.|..++.+|+.. +..+++++.+++.++.+++ + +.+.+ +..+- .+... .+ ..
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------ga~~~--~~~~~~~~~~~-~~--~~ 189 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----L------GAEEA--ATYAEVPERAK-AW--GG 189 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----T------TCSEE--EEGGGHHHHHH-HT--TS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----c------CCCEE--EECCcchhHHH-Hh--cC
Confidence 568999998 4588888888886 5689999998877665532 1 33322 22111 11111 11 45
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+|.|+- ... ..++...+.|+++|++++.
T Consensus 190 ~d~vid-~g~---------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 190 LDLVLE-VRG---------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEEE-CSC---------------TTHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE-CCH---------------HHHHHHHHhhccCCEEEEE
Confidence 777765 432 1567788899999998764
No 382
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.19 E-value=0.54 Score=40.70 Aligned_cols=92 Identities=9% Similarity=0.055 Sum_probs=56.9
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
...||-+|+|. |..++.+|+.. +. .++++|.+++.++.+++ + --.++.. |..+.+.... .
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~------------l-a~~v~~~~~~~~~~~~~~~~-~ 229 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARP------------Y-ADRLVNPLEEDLLEVVRRVT-G 229 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTT------------T-CSEEECTTTSCHHHHHHHHH-S
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH------------h-HHhccCcCccCHHHHHHHhc-C
Confidence 45799999875 78888888886 45 89999999875544321 1 1112221 1111111111 2
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
..+|.|+-.-.. ...++...+.|+++|++++.
T Consensus 230 ~g~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 230 SGVEVLLEFSGN--------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCEEEEEECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 357777654332 24788899999999998875
No 383
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.19 E-value=0.59 Score=36.36 Aligned_cols=102 Identities=10% Similarity=0.056 Sum_probs=62.8
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC--CCccc
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE--KGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~--~~s~d 144 (252)
.-|||+|-|+|..--.|.+.+|+..++.+|.--.. .-.. -.+.=.++.+|+.+.++...+ .....
T Consensus 42 GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~------hp~~-------~P~~e~~ilGdi~~tL~~~~~r~g~~a~ 108 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS------HPDS-------TPPEAQLILGDIRETLPATLERFGATAS 108 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC------CGGG-------CCCGGGEEESCHHHHHHHHHHHHCSCEE
T ss_pred CceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc------CCCC-------CCchHheecccHHHHHHHHHHhcCCceE
Confidence 46999999999999999999999999999963211 0000 122346788888876653211 34455
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT 185 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~ 185 (252)
.++..+-.-...+.-. ...-+-..+..+|.|||.++-
T Consensus 109 LaHaD~G~g~~~~d~a----~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 109 LVHADLGGHNREKNDR----FARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEECCCCSCHHHHHH----HHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEeecCCCCcchhHH----HHHhhhHHHHHHhcCCcEEEe
Confidence 5555443222111101 111244567789999998753
No 384
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.07 E-value=0.7 Score=40.21 Aligned_cols=95 Identities=8% Similarity=0.000 Sum_probs=58.4
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
....||-+|+ |.|..++.+|+.. ++.++++|.+++.++.+++ + +.+. ++.. +..+.+.....
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------g~~~--~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----L------GAAA--GFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----H------TCSE--EEETTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----c------CCcE--EEecCChHHHHHHHHHhc
Confidence 3568999984 5688888888875 5689999999887766532 2 2221 1221 11111211122
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+|.++-+-.. ..+....+.|++||++++..
T Consensus 229 ~~~~d~vi~~~G~---------------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 229 GAGVNLILDCIGG---------------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TSCEEEEEESSCG---------------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCc---------------hHHHHHHHhccCCCEEEEEe
Confidence 2357877655432 14667788999999998753
No 385
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.98 E-value=0.88 Score=39.08 Aligned_cols=94 Identities=10% Similarity=0.107 Sum_probs=58.6
Q ss_pred CceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 66 KIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
...||-+|+ |.|..+..+++.. +..++++|.+++.++.+.+ + +.+. ++.. +..+.+......
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~------g~~~--~~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----L------GCHH--TINYSTQDFAEVVREITGG 212 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----H------TCSE--EEETTTSCHHHHHHHHHTT
T ss_pred CCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCCE--EEECCCHHHHHHHHHHhCC
Confidence 568999995 6688888888876 5689999999877665542 2 2221 1221 111111111112
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.++-+-.. ..++.+.+.|++||++++..
T Consensus 213 ~~~d~vi~~~g~---------------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK---------------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT---------------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH---------------HHHHHHHHhhccCCEEEEEe
Confidence 357777654332 25778889999999988753
No 386
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=87.90 E-value=3.9 Score=35.14 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=61.0
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |...+......|+..+++ +|.+++..+.+.+. . +.. -...|..+.+ .+..+|.
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~---~------~~~---~~~~~~~~ll----~~~~~D~ 67 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK---L------GVE---KAYKDPHELI----EDPNVDA 67 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH---H------TCS---EEESSHHHHH----HCTTCCE
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH---h------CCC---ceeCCHHHHh----cCCCCCE
Confidence 477799985 433333333467888886 59988755433322 1 222 2245554433 3457899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|++.-|+.+ -...+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 68 V~i~tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g 115 (344)
T 3ezy_A 68 VLVCSSTNT--------------HSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKAD 115 (344)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHT
T ss_pred EEEcCCCcc--------------hHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 999877654 333444566667666654 234455556666665544
No 387
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.61 E-value=4 Score=35.91 Aligned_cols=110 Identities=11% Similarity=0.031 Sum_probs=69.9
Q ss_pred ceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcc--cEEEEeCCcccccCccCCCCccc
Q 025492 67 IQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQ--NISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~--nv~~~~~da~~~l~~~~~~~s~d 144 (252)
..||.||.+.|.++..++...+ +.+.-|--.-..++.|+.. ++++ +|.+...- . -....+|
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~----~~~~ds~~~~~~~~~n~~~------~~~~~~~~~~~~~~-----~--~~~~~~~ 102 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKP----YSIGDSYISELATRENLRL------NGIDESSVKFLDST-----A--DYPQQPG 102 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCC----EEEESCHHHHHHHHHHHHH------TTCCGGGSEEEETT-----S--CCCSSCS
T ss_pred CCEEEECCCCCHHHHhhccCCc----eEEEhHHHHHHHHHHHHHH------cCCCccceEecccc-----c--ccccCCC
Confidence 4699999999999999986533 4443344443444445543 2444 36664432 1 1145789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHhc
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLEN 202 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 202 (252)
.|.+..|-.-. . -...|..+...|++|+.+++..++......+...+..
T Consensus 103 ~v~~~lpk~~~----~-----l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~ 151 (375)
T 4dcm_A 103 VVLIKVPKTLA----L-----LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEK 151 (375)
T ss_dssp EEEEECCSCHH----H-----HHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHH
T ss_pred EEEEEcCCCHH----H-----HHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHh
Confidence 99988763321 1 1347888888999999999888877655555555543
No 388
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.68 E-value=1.2 Score=38.06 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=55.6
Q ss_pred eEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc-ccccCccCCCCccc
Q 025492 68 QFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS-MKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da-~~~l~~~~~~~s~d 144 (252)
.||-+|+ |.|..++.+|+.. ++.+++++.+++.++.+++ + +.+.+ +-..+. .+.+.. +....+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----l------Ga~~~-i~~~~~~~~~~~~-~~~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----L------GAKEV-LAREDVMAERIRP-LDKQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----T------TCSEE-EECC----------CCSCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----c------CCcEE-EecCCcHHHHHHH-hcCCccc
Confidence 6999997 5688889999886 5689999999876665542 1 33322 111111 111111 2234577
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+-.... ..+....+.|++||++++.
T Consensus 219 ~vid~~g~---------------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 219 AAVDPVGG---------------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEECSTT---------------TTHHHHHHTEEEEEEEEEC
T ss_pred EEEECCcH---------------HHHHHHHHhhccCCEEEEE
Confidence 77654332 1466788899999999875
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=86.63 E-value=0.95 Score=39.39 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=56.2
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...||=+|+|. |.+++.+|+.. +..++++|.+++.++.+.+. .+.+.+ +...+. +.+... .+.+|
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~---------lGa~~v-i~~~~~-~~~~~~--~~g~D 246 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQD---------LGADDY-VIGSDQ-AKMSEL--ADSLD 246 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTT---------SCCSCE-EETTCH-HHHHHS--TTTEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHH---------cCCcee-eccccH-HHHHHh--cCCCC
Confidence 55788889875 77788888875 56899999998766554311 133322 111121 112111 13578
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.|+-.-..+. .++...+.|++||++++.
T Consensus 247 ~vid~~g~~~--------------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVIDTVPVHH--------------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEECCCSCC--------------CSHHHHTTEEEEEEEEEC
T ss_pred EEEECCCChH--------------HHHHHHHHhccCCEEEEe
Confidence 7775544331 345667789999998875
No 390
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=86.21 E-value=6 Score=34.11 Aligned_cols=106 Identities=10% Similarity=0.112 Sum_probs=59.8
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GGLLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |...+......|+..++++ |.+++..+...+. . +.+ . ..|..+. +.+..+|.
T Consensus 7 ~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~---~------g~~---~-~~~~~~~----l~~~~~D~ 69 (354)
T 3db2_A 7 GVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR---Y------NCA---G-DATMEAL----LAREDVEM 69 (354)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH---H------TCC---C-CSSHHHH----HHCSSCCE
T ss_pred eEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH---c------CCC---C-cCCHHHH----hcCCCCCE
Confidence 688899985 3333333334677777754 9888755433221 1 222 1 3454433 33557899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 70 V~i~tp~~~--------------h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~ 117 (354)
T 3db2_A 70 VIITVPNDK--------------HAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETG 117 (354)
T ss_dssp EEECSCTTS--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHC
T ss_pred EEEeCChHH--------------HHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcC
Confidence 999888765 233444566666666553 233445555665555443
No 391
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.03 E-value=3.9 Score=32.96 Aligned_cols=100 Identities=7% Similarity=-0.090 Sum_probs=64.3
Q ss_pred ceEEEEcCcccHHHHHHHHHCC--CCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCCc
Q 025492 67 IQFADIGCGFGGLLISLSTLFP--EVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKGQ 142 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p--~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~s 142 (252)
..++=+|| |.++..+|+..- +. ++++|.+++.++.+. .++.++.+|+.+ .|.. ..-..
T Consensus 10 ~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------------~~~~~i~gd~~~~~~l~~-a~i~~ 71 (234)
T 2aef_A 10 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------------SGANFVHGDPTRVSDLEK-ANVRG 71 (234)
T ss_dssp CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------------TTCEEEESCTTCHHHHHH-TTCTT
T ss_pred CEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------------cCCeEEEcCCCCHHHHHh-cCcch
Confidence 46777887 577777777643 45 999999987654321 247788998753 1211 11246
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHH
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDW 195 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 195 (252)
.|.|++..++.-. ...+...++.+.|+..++....+.++...
T Consensus 72 ad~vi~~~~~d~~-----------n~~~~~~a~~~~~~~~iia~~~~~~~~~~ 113 (234)
T 2aef_A 72 ARAVIVDLESDSE-----------TIHCILGIRKIDESVRIIAEAERYENIEQ 113 (234)
T ss_dssp CSEEEECCSCHHH-----------HHHHHHHHHHHCSSSEEEEECSSGGGHHH
T ss_pred hcEEEEcCCCcHH-----------HHHHHHHHHHHCCCCeEEEEECCHhHHHH
Confidence 7888887766421 13556667778888788887766665543
No 392
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.94 E-value=7 Score=28.08 Aligned_cols=100 Identities=9% Similarity=0.029 Sum_probs=55.4
Q ss_pred eEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCCcc
Q 025492 68 QFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~s~ 143 (252)
.|+=+|||. ++..+|.. ..+..++++|.+++.++.+.. . . ++.++.+|... .+.. ..-...
T Consensus 6 ~i~IiG~G~--iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~--------~-~~~~~~~d~~~~~~l~~-~~~~~~ 70 (140)
T 1lss_A 6 YIIIAGIGR--VGYTLAKSLSEKGHDIVLIDIDKDICKKASA---E--------I-DALVINGDCTKIKTLED-AGIEDA 70 (140)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---H--------C-SSEEEESCTTSHHHHHH-TTTTTC
T ss_pred EEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---h--------c-CcEEEEcCCCCHHHHHH-cCcccC
Confidence 577778854 44444433 135789999999875543221 1 1 34566676532 1111 112357
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHH
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGD 194 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~ 194 (252)
|.|++..|++.. ...+..+.+.+.++ .++..+....+.+
T Consensus 71 d~vi~~~~~~~~-----------~~~~~~~~~~~~~~-~ii~~~~~~~~~~ 109 (140)
T 1lss_A 71 DMYIAVTGKEEV-----------NLMSSLLAKSYGIN-KTIARISEIEYKD 109 (140)
T ss_dssp SEEEECCSCHHH-----------HHHHHHHHHHTTCC-CEEEECSSTTHHH
T ss_pred CEEEEeeCCchH-----------HHHHHHHHHHcCCC-EEEEEecCHhHHH
Confidence 888888765421 12455666677775 5555565555543
No 393
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.73 E-value=0.92 Score=39.43 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=58.8
Q ss_pred CCceEEEEc-C-cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIG-C-GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIG-c-G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
....||-+| + |.|..++.+|+.. +.+++++|.+++.++.+++ + +.+.+ +.. |..+.+....
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~~--~~~~~~~~~~~~~~~~- 232 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----L------GAKRG--INYRSEDFAAVIKAET- 232 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----H------TCSEE--EETTTSCHHHHHHHHH-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----c------CCCEE--EeCCchHHHHHHHHHh-
Confidence 356899884 3 4588888888876 5689999999987766543 2 33221 221 1111121111
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+|.++-+-.. ..+....+.|++||++++..
T Consensus 233 ~~g~Dvvid~~g~---------------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 233 GQGVDIILDMIGA---------------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SSCEEEEEESCCG---------------GGHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEECCCH---------------HHHHHHHHHhccCCEEEEEE
Confidence 3457877754432 25677888999999988753
No 394
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.70 E-value=2 Score=36.49 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=58.7
Q ss_pred eEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.||=+|+ |.|..++.+|+.. +.++++++.+++..+.+++ + +.+.+ +-..+.. .+. .+..+.+|.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----l------Ga~~v-i~~~~~~-~~~-~~~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----L------GANRI-LSRDEFA-ESR-PLEKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----H------TCSEE-EEGGGSS-CCC-SSCCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----c------CCCEE-EecCCHH-HHH-hhcCCCccE
Confidence 3888997 5589999999986 5689999999987776653 2 33322 1111211 111 122346776
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
++-.. ....++...+.|+++|++++.
T Consensus 215 v~d~~---------------g~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 215 AIDTV---------------GDKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEESS---------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred EEECC---------------CcHHHHHHHHHHhcCCEEEEE
Confidence 65432 124788899999999999875
No 395
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=85.41 E-value=2 Score=37.34 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=59.7
Q ss_pred CceEEEEc--CcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 66 KIQFADIG--CGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 66 ~~~vLDIG--cG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
...||-+| .|.|..++.+|+.. ++.+++++.+++.++.+++ + +.+.+ +.. |..+.+.... .
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~------Ga~~~--~~~~~~~~~~~~~~~~-~ 229 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----L------GCDRP--INYKTEPVGTVLKQEY-P 229 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TCSEE--EETTTSCHHHHHHHHC-T
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----c------CCcEE--EecCChhHHHHHHHhc-C
Confidence 56899999 45688899999886 5689999999877665542 1 33322 221 1111121111 2
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
..+|.|+-+... ..++.+.+.|+++|++++..
T Consensus 230 ~g~D~vid~~g~---------------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESVGG---------------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECSCT---------------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCH---------------HHHHHHHHHHhcCCEEEEEe
Confidence 357777654321 37788899999999998764
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.33 E-value=7.1 Score=28.51 Aligned_cols=101 Identities=7% Similarity=0.047 Sum_probs=60.1
Q ss_pred ceEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCCCCc
Q 025492 67 IQFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFEKGQ 142 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~~~s 142 (252)
..|+=+|||. ++..+|+. ..+..++++|.+++.++.+.. ..+.++.+|+.+. +.. ..-..
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-------------~~~~~~~gd~~~~~~l~~-~~~~~ 70 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED-------------EGFDAVIADPTDESFYRS-LDLEG 70 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------TTCEEEECCTTCHHHHHH-SCCTT
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-------------CCCcEEECCCCCHHHHHh-CCccc
Confidence 3688889865 55555443 126789999999986654321 1356778887531 211 12346
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHH
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDW 195 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 195 (252)
.|.|++..++.-. ...+....+.+. .+.++.......+.+.
T Consensus 71 ~d~vi~~~~~~~~-----------n~~~~~~a~~~~-~~~iia~~~~~~~~~~ 111 (141)
T 3llv_A 71 VSAVLITGSDDEF-----------NLKILKALRSVS-DVYAIVRVSSPKKKEE 111 (141)
T ss_dssp CSEEEECCSCHHH-----------HHHHHHHHHHHC-CCCEEEEESCGGGHHH
T ss_pred CCEEEEecCCHHH-----------HHHHHHHHHHhC-CceEEEEEcChhHHHH
Confidence 7888887764321 124555566666 6667666666655443
No 397
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=84.82 E-value=12 Score=31.86 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=59.4
Q ss_pred ceEEEEcCcc-cHHHHHHHH-HCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGLLISLST-LFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~-~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
..|.=||||. |...+.... ..++..+++ +|.++...+.+.+ . .+.+ . ...|..+. +.+..+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~---~------~g~~--~-~~~~~~~~----l~~~~~ 72 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN---E------LGVE--T-TYTNYKDM----IDTENI 72 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH---T------TCCS--E-EESCHHHH----HTTSCC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH---H------hCCC--c-ccCCHHHH----hcCCCC
Confidence 4788999996 443333333 567777665 5998875433221 1 1322 1 23454433 334468
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENH 203 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~ 203 (252)
|.|++.-|+.. ..+.+...|+.|-.+++. +-+.+....+.+.....
T Consensus 73 D~V~i~tp~~~--------------h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~ 121 (346)
T 3cea_A 73 DAIFIVAPTPF--------------HPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp SEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTC
T ss_pred CEEEEeCChHh--------------HHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhC
Confidence 99998876544 334455567776555542 12334455566666555
No 398
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=84.41 E-value=5.4 Score=34.60 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=61.5
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
-.|.=||||. |...+......|+..++|| |.+++..+.+. . .+. . ...|..+. +.+..+|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~----~------~g~---~-~~~~~~~l----l~~~~~D 67 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA----Q------KGL---K-IYESYEAV----LADEKVD 67 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH----T------TTC---C-BCSCHHHH----HHCTTCC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH----h------cCC---c-eeCCHHHH----hcCCCCC
Confidence 3688899985 4443444445678888876 88887543321 1 122 1 12454433 3356789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 68 ~V~i~tp~~~--------------h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 116 (359)
T 3e18_A 68 AVLIATPNDS--------------HKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVN 116 (359)
T ss_dssp EEEECSCGGG--------------HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred EEEEcCCcHH--------------HHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhC
Confidence 9999877654 334455666666555553 334455566666665544
No 399
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=83.96 E-value=1.5 Score=37.95 Aligned_cols=92 Identities=9% Similarity=0.087 Sum_probs=56.5
Q ss_pred ceEEEEcC--cccHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCCC
Q 025492 67 IQFADIGC--GFGGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFEK 140 (252)
Q Consensus 67 ~~vLDIGc--G~G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~~ 140 (252)
..||-+|+ |.|..++.+|+.. +. .+++++.+++.++.+.+. + +... ++.. +..+.+.... .
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~---~------g~~~--~~d~~~~~~~~~~~~~~-~ 228 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSE---L------GFDA--AINYKKDNVAEQLRESC-P 228 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---S------CCSE--EEETTTSCHHHHHHHHC-T
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHH---c------CCce--EEecCchHHHHHHHHhc-C
Confidence 68999998 5577778888875 55 899999998765544321 1 2221 1221 1111111111 2
Q ss_pred CcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 141 GQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 141 ~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
+.+|.++-+-. ...++.+.+.|++||++++.
T Consensus 229 ~~~d~vi~~~G---------------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 229 AGVDVYFDNVG---------------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp TCEEEEEESCC---------------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCCEEEECCC---------------HHHHHHHHHHhccCcEEEEE
Confidence 25777765432 14788889999999999875
No 400
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=83.90 E-value=5 Score=40.12 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=53.7
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccccc-----------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYI----------- 134 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l----------- 134 (252)
...+||+-||.|.++..+.+..=...+.++|+++.+++.-+.| .++..++..|+.+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N-----------~p~~~~~~~DI~~l~~~~~~~di~~~ 608 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN-----------NPGSTVFTEDCNILLKLVMAGETTNS 608 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH-----------CTTSEEECSCHHHHHHHHHHTCSBCT
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh-----------CCCCccccccHHHHhhhccchhhhhh
Confidence 4589999999999999998883112578999999876543322 345667777764321
Q ss_pred -CccCC-CCcccEEEEeCCCCccc
Q 025492 135 -PNYFE-KGQLTKMFFLFPDPHFK 156 (252)
Q Consensus 135 -~~~~~-~~s~d~i~~~fpdP~~k 156 (252)
...++ .+.+|.|+.-+|..-+.
T Consensus 609 ~~~~lp~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 609 RGQRLPQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp TCCBCCCTTTCSEEEECCCCTTCC
T ss_pred hhhhcccCCCeeEEEEcCCCcchh
Confidence 11122 45799999988865543
No 401
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=83.85 E-value=1.4 Score=39.37 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=29.4
Q ss_pred eEEEEcCcccHHHHHHHHH---C----CCCeEEEEecCHhHHHH
Q 025492 68 QFADIGCGFGGLLISLSTL---F----PEVLMIGMELRDKVTEY 104 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~---~----p~~~~iGiDis~~~i~~ 104 (252)
.|+|+|.|+|.++..+.+. . ....|+-||+|+...+.
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~ 126 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQK 126 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHH
Confidence 6999999999998877653 2 24589999999987653
No 402
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=83.56 E-value=10 Score=32.43 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=61.0
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |...+......|+..+++ +|.+++..+...+ . .+ +.. ..|..+. +.+..+|.
T Consensus 6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---~------~g---~~~-~~~~~~~----l~~~~~D~ 68 (344)
T 3euw_A 6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE---A------NG---AEA-VASPDEV----FARDDIDG 68 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH---T------TT---CEE-ESSHHHH----TTCSCCCE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH---H------cC---Cce-eCCHHHH----hcCCCCCE
Confidence 678899987 444444444567888775 6888765432221 1 12 222 3455433 34567899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 69 V~i~tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g 116 (344)
T 3euw_A 69 IVIGSPTST--------------HVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGA 116 (344)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGG
T ss_pred EEEeCCchh--------------hHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 999877655 334445566666655552 233455566666666554
No 403
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=83.41 E-value=14 Score=31.64 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=60.0
Q ss_pred ceEEEEcCcc--cH-HHHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 67 IQFADIGCGF--GG-LLISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 67 ~~vLDIGcG~--G~-~~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
-.|.=||||. |. ++..+....|+..++ .+|.+++..+.+.+. . +.. -...|..+.+ .+..
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~---~------~~~---~~~~~~~~ll----~~~~ 82 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM---V------GNP---AVFDSYEELL----ESGL 82 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH---H------SSC---EEESCHHHHH----HSSC
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH---h------CCC---cccCCHHHHh----cCCC
Confidence 4788899993 54 344443332677665 468888755433322 1 221 2345655433 3557
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
+|.|++.-|+.+ -.+.+...|+.|=.+++. +.+.+-+..|.+...+.+.
T Consensus 83 vD~V~i~tp~~~--------------H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 134 (340)
T 1zh8_A 83 VDAVDLTLPVEL--------------NLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEK 134 (340)
T ss_dssp CSEEEECCCGGG--------------HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSS
T ss_pred CCEEEEeCCchH--------------HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 999999877655 223344555555555543 2244455556666555543
No 404
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.36 E-value=4 Score=37.52 Aligned_cols=88 Identities=13% Similarity=-0.033 Sum_probs=54.0
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|+=||+|. |..+..+++.. +.+|+++|.++...+.|.. .+.. + .+..+.+ ...|
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~----------~Ga~---~--~~l~e~l------~~aD 331 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMM----------EGFD---V--VTVEEAI------GDAD 331 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----------TTCE---E--CCHHHHG------GGCS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----------cCCE---E--ecHHHHH------hCCC
Confidence 45799999976 55556666655 5689999999876544432 1332 2 2332222 2468
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
.|+..-+.+. ++. .+..+.||+||+++...-
T Consensus 332 vVi~atgt~~---------~i~----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 332 IVVTATGNKD---------IIM----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp EEEECSSSSC---------SBC----HHHHHHSCTTCEEEECSS
T ss_pred EEEECCCCHH---------HHH----HHHHHhcCCCcEEEEeCC
Confidence 8887654332 122 245567899999987653
No 405
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=82.89 E-value=0.86 Score=39.00 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=30.4
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC----CeEEEEecCHh
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE----VLMIGMELRDK 100 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~----~~~iGiDis~~ 100 (252)
+..|+=||||.|.++..|++.+|. ..++.+|..+.
T Consensus 61 ~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 459999999999999999998775 58999998664
No 406
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.78 E-value=3.7 Score=36.16 Aligned_cols=100 Identities=9% Similarity=0.078 Sum_probs=55.6
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|+=||+|. |..+..++... +..++++|.++..++.+.+.+ +.. +.....+.. .+...+ ...|
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~---------g~~-~~~~~~~~~-~l~~~l--~~aD 233 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEF---------CGR-IHTRYSSAY-ELEGAV--KRAD 233 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT---------TTS-SEEEECCHH-HHHHHH--HHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhc---------CCe-eEeccCCHH-HHHHHH--cCCC
Confidence 45899999976 55555566555 458999999998765554321 111 112111111 121112 2468
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+..-+.|..+. ..++ .++..+.|+|||.|+...
T Consensus 234 vVi~~~~~p~~~t----~~li----~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 234 LVIGAVLVPGAKA----PKLV----SNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EEEECCCCTTSCC----CCCB----CHHHHTTSCTTCEEEEGG
T ss_pred EEEECCCcCCCCC----ccee----cHHHHhcCCCCcEEEEEe
Confidence 8877554443211 1222 345566789999887654
No 407
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=82.50 E-value=9.9 Score=33.89 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=32.2
Q ss_pred ceEEEEcCcccHHHHHHHHHCC-CCe----EEEEecCHhHHHHHHHHH
Q 025492 67 IQFADIGCGFGGLLISLSTLFP-EVL----MIGMELRDKVTEYVKERI 109 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p-~~~----~iGiDis~~~i~~a~~~~ 109 (252)
-.|||+-||.|.+...+.+..- -.. +.++|+++.+++.-..+.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~ 58 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIH 58 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHc
Confidence 4899999999999999888731 123 788999998776544443
No 408
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=82.41 E-value=5.2 Score=34.21 Aligned_cols=109 Identities=6% Similarity=-0.044 Sum_probs=61.0
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
-.|.=||||. |...+......++..++| +|.+++..+.+.+ . .+.+. ...|..+. +.+..+|
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~---~------~~~~~---~~~~~~~l----l~~~~~D 69 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAK---E------LAIPV---AYGSYEEL----CKDETID 69 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHH---H------TTCCC---CBSSHHHH----HHCTTCS
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHH---H------cCCCc---eeCCHHHH----hcCCCCC
Confidence 3688899995 443344444457878876 4888765433222 1 13221 22444432 3355789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+.
T Consensus 70 ~V~i~tp~~~--------------h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~ 119 (330)
T 3e9m_A 70 IIYIPTYNQG--------------HYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGV 119 (330)
T ss_dssp EEEECCCGGG--------------HHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCCHH--------------HHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999877654 333444566666555542 2344555666666665544
No 409
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.41 E-value=3.8 Score=35.67 Aligned_cols=93 Identities=10% Similarity=0.107 Sum_probs=55.9
Q ss_pred CCceEEEEc-Cc-ccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC---CcccccCccCC
Q 025492 65 KKIQFADIG-CG-FGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT---NSMKYIPNYFE 139 (252)
Q Consensus 65 ~~~~vLDIG-cG-~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~---da~~~l~~~~~ 139 (252)
....||=+| +| .|..++.+|+.. ++.+++++ ++...+.++ ++ +.+.+ +.. |..+.+..
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~----~l------Ga~~v--~~~~~~~~~~~~~~--- 245 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVR----KL------GADDV--IDYKSGSVEEQLKS--- 245 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HT------TCSEE--EETTSSCHHHHHHT---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHH----Hc------CCCEE--EECCchHHHHHHhh---
Confidence 356899999 45 488888899886 56899998 665554442 22 33322 221 11111211
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...+|.|+-.-..+. ..+....+.|++||++++..
T Consensus 246 ~~g~D~vid~~g~~~-------------~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 246 LKPFDFILDNVGGST-------------ETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SCCBSEEEESSCTTH-------------HHHGGGGBCSSSCCEEEESC
T ss_pred cCCCCEEEECCCChh-------------hhhHHHHHhhcCCcEEEEeC
Confidence 135788876544432 24466677899999998764
No 410
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=82.35 E-value=11 Score=32.37 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=59.6
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. +..+++..++..++ .+|.+++..+.+.+. . + + -...|..+.+ .+..+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~---~------~---~-~~~~~~~~ll----~~~~~ 76 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER---T------G---A-RGHASLTDML----AQTDA 76 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH---H------C---C-EEESCHHHHH----HHCCC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH---c------C---C-ceeCCHHHHh----cCCCC
Confidence 4788999994 443 33333333777776 569988765443322 1 3 3 2345554433 34578
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-...+.+.....+
T Consensus 77 D~V~i~tp~~~--------------h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g 126 (354)
T 3q2i_A 77 DIVILTTPSGL--------------HPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAK 126 (354)
T ss_dssp SEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred CEEEECCCcHH--------------HHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhC
Confidence 99999877654 233344556666555552 223444555555555443
No 411
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.07 E-value=3.5 Score=36.08 Aligned_cols=100 Identities=10% Similarity=0.139 Sum_probs=53.4
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|+=+|+|. |..+..++... ++.++++|.++..++.+.+.. +. .+.....+.. .+...+ ..+|
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~---------g~-~~~~~~~~~~-~l~~~~--~~~D 231 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVF---------GG-RVITLTATEA-NIKKSV--QHAD 231 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT---------TT-SEEEEECCHH-HHHHHH--HHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhc---------Cc-eEEEecCCHH-HHHHHH--hCCC
Confidence 35799999964 44445555554 568999999987665543211 22 1322222221 122222 2568
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+.+-+.+..+.. .+ +.+.+.+.|++||.++...
T Consensus 232 vVi~~~g~~~~~~~----~l----i~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 232 LLIGAVLVPGAKAP----KL----VTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EEEECCC-----------CC----SCHHHHTTSCTTCEEEECC
T ss_pred EEEECCCCCccccc----hh----HHHHHHHhhcCCCEEEEEe
Confidence 88766554321111 12 2345667789999887654
No 412
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.84 E-value=2.1 Score=36.55 Aligned_cols=91 Identities=15% Similarity=0.194 Sum_probs=56.5
Q ss_pred eEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc-ccccCccCCCCccc
Q 025492 68 QFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS-MKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da-~~~l~~~~~~~s~d 144 (252)
.||=+|+ |.|..++.+|+.. +..+++++.+++.++.+++ + +.+.+ +-..+. .+.+.. +....+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----l------Ga~~v-~~~~~~~~~~~~~-~~~~~~d 219 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----L------GASEV-ISREDVYDGTLKA-LSKQQWQ 219 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----H------TCSEE-EEHHHHCSSCCCS-SCCCCEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCcEE-EECCCchHHHHHH-hhcCCcc
Confidence 6999997 5588888888875 4679999998876666543 2 33322 111111 111111 2234577
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI 186 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~ 186 (252)
.++-.... ..+....+.|++||++++.
T Consensus 220 ~vid~~g~---------------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 220 GAVDPVGG---------------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEESCCT---------------HHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCcH---------------HHHHHHHHhhcCCCEEEEE
Confidence 77644321 3677888999999999875
No 413
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=81.72 E-value=3.4 Score=37.14 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=32.4
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHH
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVK 106 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~ 106 (252)
+...||=+|+ |.|..++.+|+.. +..+++++.++..++.++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICR 270 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHH
Confidence 3568999997 4588888999886 668999998888777664
No 414
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=81.66 E-value=8.7 Score=33.24 Aligned_cols=109 Identities=7% Similarity=0.075 Sum_probs=63.9
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. +..++...|+..++| +|.+++..+.+.+.. +. .+. ...|..+. +.+..+
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~---------g~-~~~-~~~~~~~l----l~~~~~ 88 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY---------AI-EAK-DYNDYHDL----INDKDV 88 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH---------TC-CCE-EESSHHHH----HHCTTC
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh---------CC-CCe-eeCCHHHH----hcCCCC
Confidence 3688899997 433 333443567888775 688887654433221 21 112 23455443 334578
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 89 D~V~i~tp~~~--------------h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 138 (357)
T 3ec7_A 89 EVVIITASNEA--------------HADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNG 138 (357)
T ss_dssp CEEEECSCGGG--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCcHH--------------HHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhC
Confidence 99999877654 334455667777666653 234555666666666554
No 415
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.59 E-value=0.97 Score=40.89 Aligned_cols=44 Identities=18% Similarity=0.178 Sum_probs=33.0
Q ss_pred ceEEEEcCcccHHHHHHHHHC----C-CCeEEEEecCHhHHHHHHHHHH
Q 025492 67 IQFADIGCGFGGLLISLSTLF----P-EVLMIGMELRDKVTEYVKERIL 110 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~----p-~~~~iGiDis~~~i~~a~~~~~ 110 (252)
..|+|+|.|+|.++..+.+.. + ...|+-||+|+...+.-++++.
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 489999999999888776532 1 2479999999987765555554
No 416
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.49 E-value=9.5 Score=28.37 Aligned_cols=105 Identities=10% Similarity=-0.048 Sum_probs=62.8
Q ss_pred ceEEEEcCcccHHHHHHHHHC--CCCeEEEEecC-HhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCC
Q 025492 67 IQFADIGCGFGGLLISLSTLF--PEVLMIGMELR-DKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKG 141 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis-~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~ 141 (252)
..|+=+|| |.++..+++.. .+..++.+|.+ ++.++..... . ..++.++.+|+.+ .+.. ..-.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~---~-------~~~~~~i~gd~~~~~~l~~-a~i~ 70 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR---L-------GDNADVIPGDSNDSSVLKK-AGID 70 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH---H-------CTTCEEEESCTTSHHHHHH-HTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh---h-------cCCCeEEEcCCCCHHHHHH-cChh
Confidence 35676776 55555555542 35789999997 4433222211 1 1247788998753 1211 1124
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHH
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDW 195 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 195 (252)
..|.|++..++.-. ...+...++.+.|...++...++.++.+.
T Consensus 71 ~ad~vi~~~~~d~~-----------n~~~~~~a~~~~~~~~ii~~~~~~~~~~~ 113 (153)
T 1id1_A 71 RCRAILALSDNDAD-----------NAFVVLSAKDMSSDVKTVLAVSDSKNLNK 113 (153)
T ss_dssp TCSEEEECSSCHHH-----------HHHHHHHHHHHTSSSCEEEECSSGGGHHH
T ss_pred hCCEEEEecCChHH-----------HHHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 57888887765421 13666677788788888888877766553
No 417
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=81.36 E-value=3 Score=36.39 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=58.1
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEE-eCCcccccCccCCCC
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVV-RTNSMKYIPNYFEKG 141 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~-~~da~~~l~~~~~~~ 141 (252)
....||=+|+ |.|..++.+|+.. +..++++. ++..++.+++ + +.+.+--. ..|..+.+.. +..+
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~----l------Ga~~vi~~~~~~~~~~v~~-~t~g 230 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKS----R------GAEEVFDYRAPNLAQTIRT-YTKN 230 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----T------TCSEEEETTSTTHHHHHHH-HTTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHH----c------CCcEEEECCCchHHHHHHH-HccC
Confidence 4568999998 3699999999986 56888884 7776655432 2 43322110 1122212221 1234
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhh-cCCcEEEEE
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVL-GVGGIIYTI 186 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~L-kpgG~l~~~ 186 (252)
.+|.++-.-.. ...++...+.| ++||++++.
T Consensus 231 ~~d~v~d~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 231 NLRYALDCITN--------------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CCCEEEESSCS--------------HHHHHHHHHHSCTTCEEEEES
T ss_pred CccEEEECCCc--------------hHHHHHHHHHhhcCCCEEEEE
Confidence 48888754432 24788888899 699998874
No 418
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.22 E-value=11 Score=26.02 Aligned_cols=104 Identities=8% Similarity=0.030 Sum_probs=55.6
Q ss_pred ceEEEEcCcccHHHHHHHH---HCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCC
Q 025492 67 IQFADIGCGFGGLLISLST---LFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKG 141 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~---~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~ 141 (252)
..|+=+|+| .++..+++ ......++++|.++..++.+. ..++.++.+|... .+...+ .
T Consensus 6 ~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~--~ 68 (118)
T 3ic5_A 6 WNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------------RMGVATKQVDAKDEAGLAKAL--G 68 (118)
T ss_dssp EEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------------TTTCEEEECCTTCHHHHHHHT--T
T ss_pred CeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------------hCCCcEEEecCCCHHHHHHHH--c
Confidence 468889994 44444433 343378999999987544322 1235566666542 122222 2
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHHh
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCLE 201 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 201 (252)
.+|.|+..-|... ....+...++.|...+..+......+.+.+...
T Consensus 69 ~~d~vi~~~~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 114 (118)
T 3ic5_A 69 GFDAVISAAPFFL--------------TPIIAKAAKAAGAHYFDLTEDVAATNAVRALVE 114 (118)
T ss_dssp TCSEEEECSCGGG--------------HHHHHHHHHHTTCEEECCCSCHHHHHHHHHHHH
T ss_pred CCCEEEECCCchh--------------hHHHHHHHHHhCCCEEEecCcHHHHHHHHHHHH
Confidence 5788776653211 222233344566665555655556666554433
No 419
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=80.53 E-value=11 Score=32.95 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=41.4
Q ss_pred eEEEEcCc-c-cHHHHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 68 QFADIGCG-F-GGLLISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGcG-~-G~~~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
.|.=|||| . |...+......|+..+++ +|.+++..+.+.+ .. +. . ...|..+.+ .+..+|
T Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---~~------g~---~-~~~~~~ell----~~~~vD 66 (387)
T 3moi_A 4 RFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGK---EY------GI---P-VFATLAEMM----QHVQMD 66 (387)
T ss_dssp EEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHH---HH------TC---C-EESSHHHHH----HHSCCS
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH---Hc------CC---C-eECCHHHHH----cCCCCC
Confidence 57779999 4 333344444567777765 5888775443322 11 32 2 245655433 345789
Q ss_pred EEEEeCCCCc
Q 025492 145 KMFFLFPDPH 154 (252)
Q Consensus 145 ~i~~~fpdP~ 154 (252)
.|++.-|+..
T Consensus 67 ~V~i~tp~~~ 76 (387)
T 3moi_A 67 AVYIASPHQF 76 (387)
T ss_dssp EEEECSCGGG
T ss_pred EEEEcCCcHH
Confidence 9999877654
No 420
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=79.60 E-value=11 Score=32.31 Aligned_cols=108 Identities=11% Similarity=0.096 Sum_probs=61.2
Q ss_pred eEEEEcCcc-cHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 68 QFADIGCGF-GGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGcG~-G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
.|.=||||. |.. +..++...|+..++| +|.+++..+.+.+ .. +. .+. ...|..+. +.+..+|
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~---~~------g~-~~~-~~~~~~~l----l~~~~~D 68 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVE---QY------QL-NAT-VYPNDDSL----LADENVD 68 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHH---HT------TC-CCE-EESSHHHH----HHCTTCC
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH---Hh------CC-CCe-eeCCHHHH----hcCCCCC
Confidence 467799986 433 333433567888775 5888765443322 11 22 122 23455433 3345789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+
T Consensus 69 ~V~i~tp~~~--------------h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g 117 (344)
T 3mz0_A 69 AVLVTSWGPA--------------HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVG 117 (344)
T ss_dssp EEEECSCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHS
T ss_pred EEEECCCchh--------------HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHC
Confidence 9999877654 334455667777666653 234555666666665554
No 421
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=79.58 E-value=4.3 Score=34.78 Aligned_cols=98 Identities=8% Similarity=-0.070 Sum_probs=61.8
Q ss_pred eEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCCCCcc
Q 025492 68 QFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~~~s~ 143 (252)
.++=+|+ |.++..+++.. .+. ++.+|.+++.++ +.+ .++.++.+|+.+. |.. ..-...
T Consensus 117 ~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------------~~~~~i~gd~~~~~~L~~-a~i~~a 178 (336)
T 1lnq_A 117 HVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------------SGANFVHGDPTRVSDLEK-ANVRGA 178 (336)
T ss_dssp EEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------------TTCEEEESCTTSHHHHHH-TCSTTE
T ss_pred CEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------------CCcEEEEeCCCCHHHHHh-cChhhc
Confidence 5777776 67777777763 355 999999998765 321 2477999998631 111 113457
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHH
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGD 194 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~ 194 (252)
|.+++..+++.. .-.....++.+.|...++....++++..
T Consensus 179 ~~vi~~~~~d~~-----------n~~~~~~ar~~~~~~~iiar~~~~~~~~ 218 (336)
T 1lnq_A 179 RAVIVDLESDSE-----------TIHCILGIRKIDESVRIIAEAERYENIE 218 (336)
T ss_dssp EEEEECCSSHHH-----------HHHHHHHHHTTCTTSEEEEECSSGGGHH
T ss_pred cEEEEcCCccHH-----------HHHHHHHHHHHCCCCeEEEEECCHHHHH
Confidence 788877665421 1245556677777777777776665544
No 422
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=79.51 E-value=12 Score=33.90 Aligned_cols=125 Identities=11% Similarity=0.058 Sum_probs=65.8
Q ss_pred eEEEEcCccc--HHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc---------ccEEEEeCCcccccCc
Q 025492 68 QFADIGCGFG--GLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY---------QNISVVRTNSMKYIPN 136 (252)
Q Consensus 68 ~vLDIGcG~G--~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~---------~nv~~~~~da~~~l~~ 136 (252)
.|.=||+|.= .++..|++..++..|+++|++++.++..++.. . .....++ .++.+ ..|..+.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~--~-~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~-- 84 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK--L-PIYEPGLDEIVFAARGRNLFF-SSDIPKAI-- 84 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS--C-SSCCTTHHHHHHHHBTTTEEE-ESCHHHHH--
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC--C-CcCCCCHHHHHHHhhcCCEEE-ECCHHHHh--
Confidence 6888999973 33455666666778999999998665432100 0 0000010 12322 22321111
Q ss_pred cCCCCcccEEEEeCCCCcccccc-cccccc---CHHHHHHHHHhhcCCcEEEEE-eCchHHHHHHHHHHhc
Q 025492 137 YFEKGQLTKMFFLFPDPHFKEKN-HRRRVI---SPHLLDEYAYVLGVGGIIYTI-TDVEELGDWMRSCLEN 202 (252)
Q Consensus 137 ~~~~~s~d~i~~~fpdP~~k~~h-~krr~~---~~~~l~~~~~~LkpgG~l~~~-td~~~~~~~~~~~~~~ 202 (252)
...|.|++..|.|...... ..+..- -...++.+...|++|-.++.. |-.....+.+.+.+.+
T Consensus 85 ----~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 85 ----AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp ----HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred ----hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 2468999998888631100 000000 134667788888887766653 3334444555555554
No 423
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=79.35 E-value=6.6 Score=34.60 Aligned_cols=71 Identities=11% Similarity=0.176 Sum_probs=41.4
Q ss_pred eEEEEcCcc-cH-HHHHHHHH---C----CCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc
Q 025492 68 QFADIGCGF-GG-LLISLSTL---F----PEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY 137 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~---~----p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~ 137 (252)
+|-=||||. |. ++..+++. . ++..++|| |.+++..+.+.+.+ +.+. ...|..+.|
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~---------~~~~---~y~d~~~ll--- 92 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL---------GAEK---AYGDWRELV--- 92 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH---------TCSE---EESSHHHHH---
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc---------CCCe---EECCHHHHh---
Confidence 788899985 32 23333332 1 24466664 99887655443322 3332 345665433
Q ss_pred CCCCcccEEEEeCCCCc
Q 025492 138 FEKGQLTKMFFLFPDPH 154 (252)
Q Consensus 138 ~~~~s~d~i~~~fpdP~ 154 (252)
.+..+|.|++.-|+.+
T Consensus 93 -~~~~vD~V~I~tp~~~ 108 (412)
T 4gqa_A 93 -NDPQVDVVDITSPNHL 108 (412)
T ss_dssp -HCTTCCEEEECSCGGG
T ss_pred -cCCCCCEEEECCCcHH
Confidence 3567999999887665
No 424
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=78.92 E-value=2.7 Score=36.38 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=39.5
Q ss_pred eEEEEcCcc-cHH-HHHHHHHCCC-------CeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc
Q 025492 68 QFADIGCGF-GGL-LISLSTLFPE-------VLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY 137 (252)
Q Consensus 68 ~vLDIGcG~-G~~-~~~lA~~~p~-------~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~ 137 (252)
.|-=||||. |.. +..++. .|. ..+++ +|.+++..+.+.+.. +.+. ...|..+.
T Consensus 8 rvgiIG~G~ig~~h~~~~~~-~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~---------g~~~---~~~d~~~l---- 70 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRS-APRFFDLPLHPDLNVLCGRDAEAVRAAAGKL---------GWST---TETDWRTL---- 70 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHH-HHHHSCCSSEEEEEEEECSSHHHHHHHHHHH---------TCSE---EESCHHHH----
T ss_pred cEEEEcCCHHHHHHHHHHHh-CccccccccCceEEEEEcCCHHHHHHHHHHc---------CCCc---ccCCHHHH----
Confidence 567789985 322 222222 221 24554 588887655443322 3332 34565543
Q ss_pred CCCCcccEEEEeCCCCc
Q 025492 138 FEKGQLTKMFFLFPDPH 154 (252)
Q Consensus 138 ~~~~s~d~i~~~fpdP~ 154 (252)
+.+..+|.|++.-|+.+
T Consensus 71 l~~~~iDaV~I~tP~~~ 87 (390)
T 4h3v_A 71 LERDDVQLVDVCTPGDS 87 (390)
T ss_dssp TTCTTCSEEEECSCGGG
T ss_pred hcCCCCCEEEEeCChHH
Confidence 44668999999888766
No 425
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=78.68 E-value=24 Score=30.28 Aligned_cols=111 Identities=12% Similarity=0.090 Sum_probs=62.1
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcc-cEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQ-NISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~-nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |...+......++..++ .+|.+++..+... .. .+.+ .+.. ..|..+. +.+..+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a---~~------~~~~~~~~~-~~~~~~l----l~~~~~ 72 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFA---TA------NNYPESTKI-HGSYESL----LEDPEI 72 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH---HH------TTCCTTCEE-ESSHHHH----HHCTTC
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH---HH------hCCCCCCee-eCCHHHH----hcCCCC
Confidence 3688899986 44333333446776665 4688876443222 11 1321 1222 3454433 334568
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -...+...|+.|=.+++. +.+.+-+..+.+...+.+.
T Consensus 73 D~V~i~tp~~~--------------h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~ 123 (362)
T 1ydw_A 73 DALYVPLPTSL--------------HVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV 123 (362)
T ss_dssp CEEEECCCGGG--------------HHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred CEEEEcCChHH--------------HHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 99999877654 334455667777656553 2344556777777766654
No 426
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.55 E-value=11 Score=34.05 Aligned_cols=123 Identities=8% Similarity=0.084 Sum_probs=65.8
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHH--------HHHHhhcCCCCcccEEEEeCCcccccCccCC
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKER--------ILALRVSNPGQYQNISVVRTNSMKYIPNYFE 139 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~--------~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~ 139 (252)
.|-=||+|.=...++..-.. +..|+++|++++.++..++. +...-. .+..++.+ ..|..+.+
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~---~~~~~l~~-ttd~~ea~----- 107 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLA---EKPLNFRA-TTDKHDAY----- 107 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHH---HSCCCEEE-ESCHHHHH-----
T ss_pred EEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHh---hccCCeEE-EcCHHHHH-----
Confidence 57778887633333322333 67899999999877655431 000000 00123433 23432222
Q ss_pred CCcccEEEEeCCCCcccccc-ccccccCHHHHHHHHHhhcCCcEEEEEe-CchHHHHHHHHHHhcC
Q 025492 140 KGQLTKMFFLFPDPHFKEKN-HRRRVISPHLLDEYAYVLGVGGIIYTIT-DVEELGDWMRSCLENH 203 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h-~krr~~~~~~l~~~~~~LkpgG~l~~~t-d~~~~~~~~~~~~~~~ 203 (252)
...|.|++.-|.|...... ..-. .-...++.+.. |+||-.++..+ -.....+.+.+.+...
T Consensus 108 -~~aDvViiaVPt~~~~~~~~~Dl~-~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 108 -RNADYVIIATPTDYDPKTNYFNTS-TVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp -TTCSEEEECCCCEEETTTTEEECH-HHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred -hCCCEEEEeCCCccccccccccHH-HHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 2458898888877532110 0000 01235677778 89988777653 4456667777776543
No 427
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.74 E-value=14 Score=33.27 Aligned_cols=107 Identities=11% Similarity=0.097 Sum_probs=55.7
Q ss_pred eEEEEcCcccHHH--HHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC----------cccEEEEeCCcccccC
Q 025492 68 QFADIGCGFGGLL--ISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ----------YQNISVVRTNSMKYIP 135 (252)
Q Consensus 68 ~vLDIGcG~G~~~--~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~----------~~nv~~~~~da~~~l~ 135 (252)
.|.=||+|.=... ..+++. +..|+++|++++.++..++... .....+ ..++.+ ..|..+.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~---~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~- 76 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTI---PIYEPGLEKMIARNVKAGRLRF-GTEIEQAV- 76 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCS---CCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG-
T ss_pred EEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCC---cccCCCHHHHHHhhcccCcEEE-ECCHHHHH-
Confidence 4666788752222 233333 6789999999987665433100 000001 123443 23433222
Q ss_pred ccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 136 NYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 136 ~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...|.|++..|.|........-. .-...++.+...|++|-.++..+
T Consensus 77 -----~~aDvViiaVptp~~~~~~~dl~-~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -----PEADIIFIAVGTPAGEDGSADMS-YVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp -----GGCSEEEECCCCCBCTTSSBCCH-HHHHHHHHHHHHCCSCEEEEECS
T ss_pred -----hcCCEEEEEcCCCcccCCCcChH-HHHHHHHHHHhhCCCCCEEEEee
Confidence 24689999888885321111000 11246777888888877666654
No 428
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=76.39 E-value=7.3 Score=37.61 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=30.9
Q ss_pred ceEEEEcCcccHHHHHHHHHCC-----CCeEEEEecCHhHHHHHHH
Q 025492 67 IQFADIGCGFGGLLISLSTLFP-----EVLMIGMELRDKVTEYVKE 107 (252)
Q Consensus 67 ~~vLDIGcG~G~~~~~lA~~~p-----~~~~iGiDis~~~i~~a~~ 107 (252)
-.|||+=||.|.++.-+.+... -..+.++|+++.+++.-+.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~ 258 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKY 258 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHH
Confidence 4799999999999988876521 1257899999987755443
No 429
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=76.37 E-value=34 Score=28.91 Aligned_cols=108 Identities=6% Similarity=0.011 Sum_probs=58.7
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCC--CeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 68 QFADIGCGF-GGLLISLSTLFPE--VLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~--~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
.|.=||||. |...+......|+ ..+++ +|.+++..+...+ .. +.+. ...|..+. +.+..+
T Consensus 4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~---~~------~~~~---~~~~~~~l----l~~~~v 67 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQ---KH------DIPK---AYGSYEEL----AKDPNV 67 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHH---HH------TCSC---EESSHHHH----HHCTTC
T ss_pred EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHH---Hc------CCCc---ccCCHHHH----hcCCCC
Confidence 466789985 3322222233443 35665 4888765433322 22 3332 24555443 335679
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -.+.+...|+-|-.+++- +.+.+-+..+.+...+.+.
T Consensus 68 D~V~i~tp~~~--------------H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~ 118 (334)
T 3ohs_X 68 EVAYVGTQHPQ--------------HKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGL 118 (334)
T ss_dssp CEEEECCCGGG--------------HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCcHH--------------HHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 99999877654 233445566666666553 3345556666666666554
No 430
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.36 E-value=9.3 Score=28.51 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=58.4
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc--ccCccCCCCc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK--YIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~--~l~~~~~~~s 142 (252)
...|+=+|||. |..+...+... +..++++|.++..++.+ . ....+.++.+|... .+.. ..-..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~----------~--~~~g~~~~~~d~~~~~~l~~-~~~~~ 84 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRL----------N--SEFSGFTVVGDAAEFETLKE-CGMEK 84 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGS----------C--TTCCSEEEESCTTSHHHHHT-TTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHH----------H--hcCCCcEEEecCCCHHHHHH-cCccc
Confidence 44788889876 44444444443 56899999988643221 1 01124456666532 1211 11235
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCchHHHH
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVEELGD 194 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~ 194 (252)
.|.|++..+++-. ...+..+.+.+.+...++..+....+.+
T Consensus 85 ad~Vi~~~~~~~~-----------~~~~~~~~~~~~~~~~iv~~~~~~~~~~ 125 (155)
T 2g1u_A 85 ADMVFAFTNDDST-----------NFFISMNARYMFNVENVIARVYDPEKIK 125 (155)
T ss_dssp CSEEEECSSCHHH-----------HHHHHHHHHHTSCCSEEEEECSSGGGHH
T ss_pred CCEEEEEeCCcHH-----------HHHHHHHHHHHCCCCeEEEEECCHHHHH
Confidence 7888887765431 1244445555666778887777766544
No 431
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=75.97 E-value=19 Score=29.23 Aligned_cols=59 Identities=10% Similarity=0.012 Sum_probs=35.5
Q ss_pred CceEEEEcCcc----cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGF----GG-LLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~----G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|++. |. ++..|++. +.+++.++.+....+.+.+.... .+..++.++.+|+.+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~ 70 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGT------LDRNDSIILPCDVTN 70 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHT------SSSCCCEEEECCCSS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHh------cCCCCceEEeCCCCC
Confidence 34788888762 22 23344444 67899999887654444333221 133378999999763
No 432
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=75.47 E-value=19 Score=31.78 Aligned_cols=120 Identities=12% Similarity=0.051 Sum_probs=60.7
Q ss_pred EEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHH--------HHHhhcCCCCcccEEEEeCCcccccCccC
Q 025492 69 FADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERI--------LALRVSNPGQYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 69 vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~--------~~~~~~~~~~~~nv~~~~~da~~~l~~~~ 138 (252)
|.=||+|. ++..+|.. . +..|+++|++++.++..++.. ...-. ....++.+ ..|..+.+
T Consensus 3 I~VIG~G~--vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~---~~~~~l~~-t~~~~~~~---- 71 (402)
T 1dlj_A 3 IAVAGSGY--VGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLK---SKQLSIKA-TLDSKAAY---- 71 (402)
T ss_dssp EEEECCSH--HHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHH---HSCCCEEE-ESCHHHHH----
T ss_pred EEEECCCH--HHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHH---hccCcEEE-eCCHHHHh----
Confidence 55678875 33333322 3 578999999987665432110 00000 00012222 12221111
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEE-EeCchHHHHHHHHHHhc
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYT-ITDVEELGDWMRSCLEN 202 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~-~td~~~~~~~~~~~~~~ 202 (252)
...|.|++..|.|..+..+.-.--.-...++.+.. |++|..++. .|......+.+.+.+..
T Consensus 72 --~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~ 133 (402)
T 1dlj_A 72 --KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT 133 (402)
T ss_dssp --HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC
T ss_pred --cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC
Confidence 14689999888874211100000012356777778 888887776 56555666666666543
No 433
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=74.81 E-value=24 Score=31.79 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=63.6
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHH------------HHHHhhcCCCCcccEEEEeCCcccc
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIGMELRDKVTEYVKER------------ILALRVSNPGQYQNISVVRTNSMKY 133 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~------------~~~~~~~~~~~~~nv~~~~~da~~~ 133 (252)
.|.=||+|. |. ++..|++..++..|+++|++++.++..++. +... ...++.+ ..|..+.
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~------~~~~~~~-t~~~~e~ 79 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESC------RGKNLFF-STNIDDA 79 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH------BTTTEEE-ESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHh------hcCCEEE-ECCHHHH
Confidence 577789986 33 344566665567899999999866543210 0000 0012333 2232211
Q ss_pred cCccCCCCcccEEEEeCCCCcccccccc-cccc---CHHHHHHHHHhhcCCcEEEEE-eCchHHHHHHHHHHhc
Q 025492 134 IPNYFEKGQLTKMFFLFPDPHFKEKNHR-RRVI---SPHLLDEYAYVLGVGGIIYTI-TDVEELGDWMRSCLEN 202 (252)
Q Consensus 134 l~~~~~~~s~d~i~~~fpdP~~k~~h~k-rr~~---~~~~l~~~~~~LkpgG~l~~~-td~~~~~~~~~~~~~~ 202 (252)
+ ...|.|++..|+|.....-.. ...- -...++.+...|++|..++.. |-.....+.+.+.+.+
T Consensus 80 ~------~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~ 147 (467)
T 2q3e_A 80 I------KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA 147 (467)
T ss_dssp H------HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH
T ss_pred H------hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH
Confidence 2 246899999888863211000 0000 124566677778887666543 3333444555555554
No 434
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=74.70 E-value=25 Score=31.22 Aligned_cols=105 Identities=13% Similarity=0.100 Sum_probs=54.0
Q ss_pred EEEEcCcc-cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC----------cccEEEEeCCcccccCc
Q 025492 69 FADIGCGF-GG-LLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ----------YQNISVVRTNSMKYIPN 136 (252)
Q Consensus 69 vLDIGcG~-G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~----------~~nv~~~~~da~~~l~~ 136 (252)
|.=||+|. |. ++..|++. +..|+++|++++.++..++.. . .....+ ..++.+ ..|..+.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~--~-~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~-- 74 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGK--S-PIVEPGLEALLQQGRQTGRLSG-TTDFKKAV-- 74 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC--C-SSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred EEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCC--C-CcCCCCHHHHHHhhcccCceEE-eCCHHHHh--
Confidence 55678886 33 23344444 568999999998765443210 0 000000 112433 22332212
Q ss_pred cCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcC---CcEEEEE
Q 025492 137 YFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGV---GGIIYTI 186 (252)
Q Consensus 137 ~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkp---gG~l~~~ 186 (252)
...|.|++..|.|........-.. -...++.+...|++ |..++..
T Consensus 75 ----~~aDvviiaVptp~~~~~~~dl~~-v~~v~~~i~~~l~~~~~~~iVV~~ 122 (436)
T 1mv8_A 75 ----LDSDVSFICVGTPSKKNGDLDLGY-IETVCREIGFAIREKSERHTVVVR 122 (436)
T ss_dssp ----HTCSEEEECCCCCBCTTSSBCCHH-HHHHHHHHHHHHTTCCSCCEEEEC
T ss_pred ----ccCCEEEEEcCCCcccCCCcchHH-HHHHHHHHHHHhcccCCCcEEEEe
Confidence 146899999888873222111000 13466778888888 6655543
No 435
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=74.62 E-value=16 Score=31.46 Aligned_cols=71 Identities=10% Similarity=0.183 Sum_probs=39.7
Q ss_pred eEEEEcCcc-cH-HHHHHHH------HCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC
Q 025492 68 QFADIGCGF-GG-LLISLST------LFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~------~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~ 138 (252)
.|-=||||. |. ++..+.. ..|+..++|| |.+++..+.+.+.+ +.++ ...|..+. +
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~---------g~~~---~y~d~~el----l 90 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF---------GFEK---ATADWRAL----I 90 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH---------TCSE---EESCHHHH----H
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh---------CCCe---ecCCHHHH----h
Confidence 688899985 22 1111111 2356677765 88877554433322 3332 34565543 3
Q ss_pred CCCcccEEEEeCCCCc
Q 025492 139 EKGQLTKMFFLFPDPH 154 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~ 154 (252)
.+..+|.|++.-|+.+
T Consensus 91 ~~~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 91 ADPEVDVVSVTTPNQF 106 (393)
T ss_dssp HCTTCCEEEECSCGGG
T ss_pred cCCCCcEEEECCChHH
Confidence 3568999999888766
No 436
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=74.59 E-value=3.6 Score=35.62 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=24.8
Q ss_pred ceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHh
Q 025492 67 IQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDK 100 (252)
Q Consensus 67 ~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~ 100 (252)
..||=+|+ |.|.+++.+|+.. ++.++++..+.+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~ 203 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRP 203 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCT
T ss_pred cEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCcc
Confidence 68998987 4588888999875 567888865543
No 437
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=74.51 E-value=7.8 Score=34.53 Aligned_cols=41 Identities=12% Similarity=0.061 Sum_probs=31.8
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHH
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVK 106 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~ 106 (252)
....||=+|+ |.|..++.+|+.. +..+++++.+++.++.++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~ 262 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR 262 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 3568999997 4488888888875 568999999888776653
No 438
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=74.21 E-value=13 Score=33.51 Aligned_cols=105 Identities=10% Similarity=0.148 Sum_probs=55.2
Q ss_pred ceEEEEcCcccHH--HHHHHHHCCCCeEEEEecCHhHHHHHHHH------------HHHHhhcCCCCcccEEEEeCCccc
Q 025492 67 IQFADIGCGFGGL--LISLSTLFPEVLMIGMELRDKVTEYVKER------------ILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 67 ~~vLDIGcG~G~~--~~~lA~~~p~~~~iGiDis~~~i~~a~~~------------~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
..|-=||+|.=.+ +..+|+. +..|+|+|+++..++..++- +.+. ....+++| ..|..+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~-----~~~g~l~~-tt~~~~ 93 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRA-----LSSGRLSF-AESAEE 93 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHH-----HHTTCEEE-CSSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHH-----HHcCCeeE-EcCHHH
Confidence 4677789887443 3445555 67899999999877654321 0000 00112333 222221
Q ss_pred ccCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCC--c-EEEEE
Q 025492 133 YIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVG--G-IIYTI 186 (252)
Q Consensus 133 ~l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~Lkpg--G-~l~~~ 186 (252)
.+ ...|.+++..|.|........-.. -....+.+.+.|+++ | .+++.
T Consensus 94 ai------~~ad~~~I~VpTP~~~d~~~Dl~~-v~~a~~~I~~~l~~~~~g~lVV~e 143 (444)
T 3vtf_A 94 AV------AATDATFIAVGTPPAPDGSADLRY-VEAAARAVGRGIRAKGRWHLVVVK 143 (444)
T ss_dssp HH------HTSSEEEECCCCCBCTTSSBCCHH-HHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred HH------hcCCceEEEecCCCCCCCCCCcHH-HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 12 135788888888864332221110 124556777788753 4 45543
No 439
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=74.15 E-value=2.4 Score=36.67 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=52.5
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
....||=+|+ |.|..++.+|+......+++++ +....+.+. . +.+.+.-...|..+.+.. +..+.
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~------ga~~~~~~~~~~~~~~~~-~~~~g 208 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----D------SVTHLFDRNADYVQEVKR-ISAEG 208 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----G------GSSEEEETTSCHHHHHHH-HCTTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----c------CCcEEEcCCccHHHHHHH-hcCCC
Confidence 3568999998 3478888888876667899998 444333221 1 333221111222222221 12356
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+-....+ .+....+.|++||++++.-
T Consensus 209 ~Dvv~d~~g~~---------------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 209 VDIVLDCLCGD---------------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEEEECC----------------------CTTEEEEEEEEEEC
T ss_pred ceEEEECCCch---------------hHHHHHHHhhcCCEEEEEC
Confidence 88877554332 3366778999999998753
No 440
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=74.09 E-value=5.7 Score=36.02 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=42.4
Q ss_pred eEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC---CCc
Q 025492 68 QFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE---KGQ 142 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~---~~s 142 (252)
.|+=+|| |.++..+|+.. .+..++.||.+++.++.+... + .+..+.+|+.. . ..+. -..
T Consensus 5 ~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-----------~-~~~~i~Gd~~~-~-~~L~~Agi~~ 68 (461)
T 4g65_A 5 KIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-----------Y-DLRVVNGHASH-P-DVLHEAGAQD 68 (461)
T ss_dssp EEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-----------S-SCEEEESCTTC-H-HHHHHHTTTT
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-----------c-CcEEEEEcCCC-H-HHHHhcCCCc
Confidence 4555555 57777777764 356899999999887655432 1 47789999863 1 1121 245
Q ss_pred ccEEEEeC
Q 025492 143 LTKMFFLF 150 (252)
Q Consensus 143 ~d~i~~~f 150 (252)
.|.+...-
T Consensus 69 ad~~ia~t 76 (461)
T 4g65_A 69 ADMLVAVT 76 (461)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEc
Confidence 67666543
No 441
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=73.07 E-value=9.9 Score=33.08 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=53.6
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
..||=+|+|. |..+..++... +..++++|.+++.++.+.+.. ...+..+..+.. .+...+ ..+|.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~----------~~~~~~~~~~~~-~~~~~~--~~~Dv 233 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLF----------GSRVELLYSNSA-EIETAV--AEADL 233 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----------GGGSEEEECCHH-HHHHHH--HTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhh----------CceeEeeeCCHH-HHHHHH--cCCCE
Confidence 5899999975 44555566655 458999999998766654322 112322322211 111111 14677
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
|+-.-+.|.... ..++ .+.....|++||.++...
T Consensus 234 VI~~~~~~~~~~----~~li----~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 234 LIGAVLVPGRRA----PILV----PASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EEECCCCTTSSC----CCCB----CHHHHTTSCTTCEEEETT
T ss_pred EEECCCcCCCCC----Ceec----CHHHHhhCCCCCEEEEEe
Confidence 765443332110 1111 334556789999887643
No 442
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=72.35 E-value=21 Score=31.55 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=57.9
Q ss_pred ceEEEEcCcc----cHHHHHHHHHCCCCeEEE-E-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc-CC
Q 025492 67 IQFADIGCGF----GGLLISLSTLFPEVLMIG-M-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY-FE 139 (252)
Q Consensus 67 ~~vLDIGcG~----G~~~~~lA~~~p~~~~iG-i-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~-~~ 139 (252)
-.|.=||||. |..-+......++..+++ | |.+++..+.+.+. . +.+... ...|..+.+... ..
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~---~------g~~~~~-~~~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRE---L------GLDPSR-VYSDFKEMAIREAKL 107 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHH---H------TCCGGG-BCSCHHHHHHHHHHC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH---c------CCCccc-ccCCHHHHHhccccc
Confidence 3788999996 433333344566677774 4 9988765443322 2 332111 123444333210 00
Q ss_pred CCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 140 KGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
+..+|.|++.-|+.. -.+.+...|+-|=.+++- +.+.+-+..+.+..++.+
T Consensus 108 ~~~vD~V~I~tp~~~--------------H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 161 (417)
T 3v5n_A 108 KNGIEAVAIVTPNHV--------------HYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESD 161 (417)
T ss_dssp TTCCSEEEECSCTTS--------------HHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCS
T ss_pred CCCCcEEEECCCcHH--------------HHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 146899999877665 223344455555454442 223444555555555443
No 443
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=72.30 E-value=33 Score=28.74 Aligned_cols=106 Identities=7% Similarity=0.022 Sum_probs=58.9
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. .+......++..++ .+|.+++..+.+.+. . +.+ ...|.. .+ ...+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~---~------g~~----~~~~~~-~l-----~~~~ 66 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES---W------RIP----YADSLS-SL-----AASC 66 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH---H------TCC----BCSSHH-HH-----HTTC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH---c------CCC----ccCcHH-Hh-----hcCC
Confidence 3688899986 432 33333345777776 678887654433221 1 322 223332 22 3468
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe---CchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT---DVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -.+.+...|+.|-.+++.. -+.+-...+.+...+.+.
T Consensus 67 D~V~i~tp~~~--------------h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~ 117 (319)
T 1tlt_A 67 DAVFVHSSTAS--------------HFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 117 (319)
T ss_dssp SEEEECSCTTH--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCchh--------------HHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 99998877654 3344555677766565532 234455666666665543
No 444
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=72.15 E-value=11 Score=31.92 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=54.4
Q ss_pred CCceEEEEc-Ccc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCc
Q 025492 65 KKIQFADIG-CGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 65 ~~~~vLDIG-cG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s 142 (252)
+...||=+| +|. |..++.+|+.. +..+++++ +....+.+++ + +.+. ++..+-.+.+...+ ..
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~----l------Ga~~--~i~~~~~~~~~~~~--~g 215 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKA----L------GAEQ--CINYHEEDFLLAIS--TP 215 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHH----H------TCSE--EEETTTSCHHHHCC--SC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHH----c------CCCE--EEeCCCcchhhhhc--cC
Confidence 356888886 665 88889999886 56899997 4444444432 2 4332 22221111011111 34
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+-.-.. ..+....+.|++||+++..-
T Consensus 216 ~D~v~d~~g~---------------~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 216 VDAVIDLVGG---------------DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEEESSCH---------------HHHHHHGGGEEEEEEEEECC
T ss_pred CCEEEECCCc---------------HHHHHHHHhccCCCEEEEeC
Confidence 6776643321 34488889999999998764
No 445
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=71.89 E-value=29 Score=28.95 Aligned_cols=105 Identities=11% Similarity=0.098 Sum_probs=60.9
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. ........|+..+++ +|.+++..+...+. . +.+ . ..|..+. +. .+
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~---~------~~~---~-~~~~~~l----l~--~~ 67 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSD---Y------RIM---P-FDSIESL----AK--KC 67 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHH---H------TCC---B-CSCHHHH----HT--TC
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH---c------CCC---C-cCCHHHH----Hh--cC
Confidence 3688899985 442 334344557888874 79888765443322 1 322 1 3454432 22 68
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-...+.+...+.+
T Consensus 68 D~V~i~tp~~~--------------h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 68 DCIFLHSSTET--------------HYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp SEEEECCCGGG--------------HHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCcHh--------------HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 99998877654 334445567777666552 334555666666666554
No 446
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=71.46 E-value=21 Score=30.05 Aligned_cols=105 Identities=8% Similarity=-0.007 Sum_probs=55.1
Q ss_pred eEEEEcCcc-cHHH-H-HHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 68 QFADIGCGF-GGLL-I-SLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~-G~~~-~-~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
.|.=||||. |... + .+++ ++..+++ +|.+++..+...+ .. +.+. ...|..+. +.+..+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~--~~~~~vav~d~~~~~~~~~~~---~~------g~~~---~~~~~~~~----l~~~~~ 63 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA--TGGEVVSMMSTSAERGAAYAT---EN------GIGK---SVTSVEEL----VGDPDV 63 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH--TTCEEEEEECSCHHHHHHHHH---HT------TCSC---CBSCHHHH----HTCTTC
T ss_pred eEEEEcccHHHHHhhhHHhhc--CCCeEEEEECCCHHHHHHHHH---Hc------CCCc---ccCCHHHH----hcCCCC
Confidence 366789985 4332 2 3443 7777775 5988875433222 11 2221 12343332 334468
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.+ ....+...|+.|-.+++. +.+.+-...+.+...+.+
T Consensus 64 D~V~i~tp~~~--------------h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g 113 (332)
T 2glx_A 64 DAVYVSTTNEL--------------HREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAG 113 (332)
T ss_dssp CEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred CEEEEeCChhH--------------hHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 99999877654 233444556666555542 223444555665555443
No 447
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=70.98 E-value=6.8 Score=33.95 Aligned_cols=107 Identities=11% Similarity=0.079 Sum_probs=56.4
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. .+......|+..+++ +|.+++..+.+.+ ....+.+ ..|..+.+ .+..+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~-----------~~~~~~~-~~~~~~ll----~~~~v 69 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHR-----------FISDIPV-LDNVPAML----NQVPL 69 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGG-----------TSCSCCE-ESSHHHHH----HHSCC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------hcCCCcc-cCCHHHHh----cCCCC
Confidence 3688899998 652 334444567888875 4888764332211 1112222 34554433 34578
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENH 203 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~ 203 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.
T Consensus 70 D~V~i~tp~~~--------------H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 118 (359)
T 3m2t_A 70 DAVVMAGPPQL--------------HFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRS 118 (359)
T ss_dssp SEEEECSCHHH--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred CEEEEcCCcHH--------------HHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHc
Confidence 99998776543 233344555555554442 22334444455554443
No 448
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=70.90 E-value=25 Score=31.27 Aligned_cols=74 Identities=5% Similarity=-0.002 Sum_probs=41.6
Q ss_pred ceEEEEcC----cc-cHHHHHHHHHC-CCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCC
Q 025492 67 IQFADIGC----GF-GGLLISLSTLF-PEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFE 139 (252)
Q Consensus 67 ~~vLDIGc----G~-G~~~~~lA~~~-p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~ 139 (252)
-.|.=||| |. |...+...... |+..++ .+|.+++..+.+.+ . .+.+.+.+ ..|..+. +.
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~---~------~g~~~~~~-~~~~~~l----l~ 86 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQ---R------LKLSNATA-FPTLESF----AS 86 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHH---H------TTCTTCEE-ESSHHHH----HH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH---H------cCCCccee-eCCHHHH----hc
Confidence 36888999 55 33333333445 777765 56888765443322 1 13333332 3455443 33
Q ss_pred CCcccEEEEeCCCCc
Q 025492 140 KGQLTKMFFLFPDPH 154 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~ 154 (252)
+..+|.|++.-|+.+
T Consensus 87 ~~~vD~V~i~tp~~~ 101 (438)
T 3btv_A 87 SSTIDMIVIAIQVAS 101 (438)
T ss_dssp CSSCSEEEECSCHHH
T ss_pred CCCCCEEEEeCCcHH
Confidence 457899999877654
No 449
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=70.78 E-value=28 Score=30.01 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=40.2
Q ss_pred ceEEEEcCcccHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 67 IQFADIGCGFGGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
-.|.=||||.... ...-+...|+..++| +|.+++..+.+.+ .. +. +. ...|..+. +.+..+|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~------~~--~~-~~~~~~~l----l~~~~vD 90 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSA---VY------AD--AR-RIATAEEI----LEDENIG 90 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHH---HS------SS--CC-EESCHHHH----HTCTTCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH---Hc------CC--Cc-ccCCHHHH----hcCCCCC
Confidence 3688899997542 221121247787765 5888765433222 11 21 11 23555443 3456799
Q ss_pred EEEEeCCCCc
Q 025492 145 KMFFLFPDPH 154 (252)
Q Consensus 145 ~i~~~fpdP~ 154 (252)
.|++.-|+..
T Consensus 91 ~V~I~tp~~~ 100 (361)
T 3u3x_A 91 LIVSAAVSSE 100 (361)
T ss_dssp EEEECCCHHH
T ss_pred EEEEeCChHH
Confidence 9998776544
No 450
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=70.72 E-value=38 Score=27.81 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=57.6
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |. ++..++...++..++++|.+++.++.+.+ . +... ....|..+ .+ ...|.
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~------g~~~--~~~~~~~~----~~--~~aDv 69 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----R------GIVD--EATADFKV----FA--ALADV 69 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----T------TSCS--EEESCTTT----TG--GGCSE
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----c------CCcc--cccCCHHH----hh--cCCCE
Confidence 577789887 33 33445555446789999999876554321 1 2210 11223221 11 24688
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHh-hcCCcEEEEEeCchH-HHHHHHHHHh
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYV-LGVGGIIYTITDVEE-LGDWMRSCLE 201 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~-LkpgG~l~~~td~~~-~~~~~~~~~~ 201 (252)
|++..|.+.. ..+++.+... |++|..++..+.... ..+.+.+.+.
T Consensus 70 Vilavp~~~~-----------~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~ 116 (290)
T 3b1f_A 70 IILAVPIKKT-----------IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLK 116 (290)
T ss_dssp EEECSCHHHH-----------HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHT
T ss_pred EEEcCCHHHH-----------HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhcc
Confidence 8887765432 2577777777 888766654433322 2244444443
No 451
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=70.42 E-value=13 Score=38.41 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=52.5
Q ss_pred CceEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccccc-----------
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYI----------- 134 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l----------- 134 (252)
...+||+-||.|.+...+.+..-...+.++|+++.+++.-+.| .++..++..|+...+
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N-----------~p~~~~~~~DI~~l~~~~~~gdi~~~ 919 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLN-----------NPGTTVFTEDCNVLLKLVMAGEVTNS 919 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHH-----------CTTSEEECSCHHHHHHHHTTTCSBCS
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh-----------CCCCcEeeccHHHHhHhhhccchhhh
Confidence 4579999999999999988873112578999999876543322 234556666654221
Q ss_pred -CccCC-CCcccEEEEeCCCCccc
Q 025492 135 -PNYFE-KGQLTKMFFLFPDPHFK 156 (252)
Q Consensus 135 -~~~~~-~~s~d~i~~~fpdP~~k 156 (252)
...++ .+.+|.|+.-+|..-+.
T Consensus 920 ~~~~lp~~~~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGGPPCQGFS 943 (1330)
T ss_dssp SCCBCCCTTTCSEEEECCCCTTTC
T ss_pred hhhhccccCccceEEecCCCcccc
Confidence 11122 35789999888865544
No 452
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=70.33 E-value=30 Score=29.84 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=60.7
Q ss_pred ceEEEEcCcc-cH-HHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GG-LLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~-~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |. +........|+..++|+ |.+++.+. + . ...+.+ ..|..+. +.+..+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~---~--------~~~~~~-~~~~~~l----l~~~~~ 68 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK---R---D--------LPDVTV-IASPEAA----VQHPDV 68 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---H---H--------CTTSEE-ESCHHHH----HTCTTC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---h---h--------CCCCcE-ECCHHHH----hcCCCC
Confidence 3688899997 43 24445556788888754 88775321 1 1 112322 3555443 345679
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -.+.+...|+.|=.+++. +.+.+-+..+.+...+.+.
T Consensus 69 D~V~i~tp~~~--------------H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 69 DLVVIASPNAT--------------HAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp SEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCChHH--------------HHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 99999877654 233444566666555542 2344555666666665543
No 453
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=70.16 E-value=15 Score=33.43 Aligned_cols=108 Identities=8% Similarity=0.031 Sum_probs=57.4
Q ss_pred ceEEEEcCcc-cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCc----------ccEEEEeCCccccc
Q 025492 67 IQFADIGCGF-GG-LLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQY----------QNISVVRTNSMKYI 134 (252)
Q Consensus 67 ~~vLDIGcG~-G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~----------~nv~~~~~da~~~l 134 (252)
-.|.=||+|. |. ++..||+. +..|+++|++++.++..++.... ....++ .++.+ ..|..+.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~---i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVP---IHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCS---SCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCC---cCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 3677889986 33 23344444 56899999999877654431000 000011 12333 22322111
Q ss_pred CccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 135 PNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 135 ~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
...|.|++..|.|.-...... --.-...++.+...|++|-.++..+
T Consensus 83 ------~~aDvviiaVptp~~~~~~~d-l~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 83 ------AHGDVQFIAVGTPPDEDGSAD-LQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp ------HHCSEEEECCCCCBCTTSSBC-CHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ------hcCCEEEEEeCCCcccCCCcc-HHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 246899999888853221110 0012346677888888877665543
No 454
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=69.88 E-value=6.2 Score=33.67 Aligned_cols=108 Identities=6% Similarity=0.012 Sum_probs=58.0
Q ss_pred ceEEEEcCcc-cH-HHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GG-LLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~-~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |. ++..+. ..++..++++ |.+++..+.+. ...+.+. ...|..+. +.+..+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~-~~~~~~~~av~d~~~~~~~~~a---------~~~~~~~---~~~~~~~l----l~~~~~ 68 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVR-LAGNGEVVAVSSRTLESAQAFA---------NKYHLPK---AYDKLEDM----LADESI 68 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHH-HHCSEEEEEEECSCSSTTCC------------CCCCSC---EESCHHHH----HTCTTC
T ss_pred eEEEEEechHHHHHHHHHHH-hCCCcEEEEEEcCCHHHHHHHH---------HHcCCCc---ccCCHHHH----hcCCCC
Confidence 3688899995 33 333333 3467777765 87765322111 1122221 23454433 335678
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+.
T Consensus 69 D~V~i~tp~~~--------------h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~ 119 (329)
T 3evn_A 69 DVIYVATINQD--------------HYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNL 119 (329)
T ss_dssp CEEEECSCGGG--------------HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCcHH--------------HHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCC
Confidence 99999877654 233444556666666553 2344555666666655543
No 455
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=69.87 E-value=21 Score=32.30 Aligned_cols=73 Identities=8% Similarity=0.066 Sum_probs=41.4
Q ss_pred ceEEEEcCcc--cHHH----HHHHHHC-CCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccC
Q 025492 67 IQFADIGCGF--GGLL----ISLSTLF-PEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 67 ~~vLDIGcG~--G~~~----~~lA~~~-p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~ 138 (252)
-.|.=||||. |..+ ..++ .. |+..+++ +|.+++..+.+.+ . .+.+.+.+ ..|..+.+
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~-~~~~~~~lvav~d~~~~~a~~~a~---~------~g~~~~~~-~~d~~ell---- 104 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQ-QLSSQFQIVALYNPTLKSSLQTIE---Q------LQLKHATG-FDSLESFA---- 104 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHH-HTTTTEEEEEEECSCHHHHHHHHH---H------TTCTTCEE-ESCHHHHH----
T ss_pred CEEEEEcccCCCCHHHHHHHHHHH-hcCCCeEEEEEEeCCHHHHHHHHH---H------cCCCccee-eCCHHHHh----
Confidence 3688999943 3333 3333 34 7777764 5888765443322 1 14433322 34554433
Q ss_pred CCCcccEEEEeCCCCc
Q 025492 139 EKGQLTKMFFLFPDPH 154 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~ 154 (252)
.+..+|.|++.-|+.+
T Consensus 105 ~~~~vD~V~I~tp~~~ 120 (479)
T 2nvw_A 105 QYKDIDMIVVSVKVPE 120 (479)
T ss_dssp HCTTCSEEEECSCHHH
T ss_pred cCCCCCEEEEcCCcHH
Confidence 3457999999877654
No 456
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=69.25 E-value=7.8 Score=33.47 Aligned_cols=42 Identities=14% Similarity=0.311 Sum_probs=32.3
Q ss_pred CCceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHH
Q 025492 65 KKIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVK 106 (252)
Q Consensus 65 ~~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~ 106 (252)
+...||=+|+|. |.+++.+|+..++..++++|.+++.++.++
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 356888898865 677788888764568999999988776654
No 457
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=69.16 E-value=39 Score=28.93 Aligned_cols=103 Identities=14% Similarity=0.196 Sum_probs=57.1
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
.|.=||||. |. +........|+..++|| |.+++. +.+ . ...+.+ ..|..+. +.+..+|
T Consensus 7 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~---~--------~~~~~~-~~~~~~l----l~~~~vD 67 (358)
T 3gdo_A 7 KVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE---VKR---D--------FPDAEV-VHELEEI----TNDPAIE 67 (358)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH---HHH---H--------CTTSEE-ESSTHHH----HTCTTCC
T ss_pred eEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHh---h--------CCCCce-ECCHHHH----hcCCCCC
Confidence 677899997 43 23444556688888765 777643 111 1 112332 3455443 3456799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENH 203 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~ 203 (252)
.|++.-|+.. -.+.+...|+-|-.+++- +.+.+-+..+.+...+.
T Consensus 68 ~V~i~tp~~~--------------H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 68 LVIVTTPSGL--------------HYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp EEEECSCTTT--------------HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred EEEEcCCcHH--------------HHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 9999888765 233444556666555542 23344455555555444
No 458
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.55 E-value=11 Score=34.00 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=63.6
Q ss_pred ceEEEEcCcccHHH--HHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC----------cccEEEEeCCccccc
Q 025492 67 IQFADIGCGFGGLL--ISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ----------YQNISVVRTNSMKYI 134 (252)
Q Consensus 67 ~~vLDIGcG~G~~~--~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~----------~~nv~~~~~da~~~l 134 (252)
-++-=||+|.=... ..||+. +..|+|+|++++.++..++.. . .....+ ..++.+ ..|..+.+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~--~-~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~ 82 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNV--M-PIYEPGLDALVASNVKAGRLSF-TTDLAEGV 82 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTC--C-SSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCC--C-CccCCCHHHHHHhhcccCCEEE-ECCHHHHH
Confidence 35667888752222 233333 678999999998765433210 0 000001 123443 23432222
Q ss_pred CccCCCCcccEEEEeCCCCccc-cccccccccCHHHHHHHHHhhcCCcEEEEEe-CchHHHHHHHHHHhc
Q 025492 135 PNYFEKGQLTKMFFLFPDPHFK-EKNHRRRVISPHLLDEYAYVLGVGGIIYTIT-DVEELGDWMRSCLEN 202 (252)
Q Consensus 135 ~~~~~~~s~d~i~~~fpdP~~k-~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t-d~~~~~~~~~~~~~~ 202 (252)
...|.|++..|.|... .....-.. -...++.+...|++|-.++..| -.....+.+.+.+.+
T Consensus 83 ------~~aDvvii~Vptp~~~~~~~~Dl~~-v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 83 ------KDADAVFIAVGTPSRRGDGHADLSY-VFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp ------TTCSEEEECCCCCBCTTTCCBCTHH-HHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred ------hcCCEEEEEcCCCCccccCCccHHH-HHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 2458999998888631 11110000 1245677788888888777654 233445555555543
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=68.49 E-value=41 Score=26.43 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=42.8
Q ss_pred CceEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccE-EEEeCCcccccCccCCCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNI-SVVRTNSMKYIPNYFEKGQ 142 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv-~~~~~da~~~l~~~~~~~s 142 (252)
+..||=.|+. |.++..+++. ..+..|++++.++...+... . .++ .++.+|+.+.+...+ ..
T Consensus 21 ~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~---------~~~~~~~~~Dl~~~~~~~~--~~ 84 (236)
T 3e8x_A 21 GMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E---------RGASDIVVANLEEDFSHAF--AS 84 (236)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H---------TTCSEEEECCTTSCCGGGG--TT
T ss_pred CCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h---------CCCceEEEcccHHHHHHHH--cC
Confidence 3478888864 5555555544 13678999999986543211 1 257 889999863333333 35
Q ss_pred ccEEEEeC
Q 025492 143 LTKMFFLF 150 (252)
Q Consensus 143 ~d~i~~~f 150 (252)
+|.|+.+-
T Consensus 85 ~D~vi~~a 92 (236)
T 3e8x_A 85 IDAVVFAA 92 (236)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 78887654
No 460
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=67.83 E-value=12 Score=33.12 Aligned_cols=40 Identities=20% Similarity=0.298 Sum_probs=30.0
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHH
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVK 106 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~ 106 (252)
...|+=||+|. |..+..++... +.+++++|.++..++.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 34788899996 66666666665 568999999998665553
No 461
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=67.68 E-value=15 Score=30.21 Aligned_cols=60 Identities=7% Similarity=0.030 Sum_probs=39.9
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|++.| ++.++|+.. .+.+|++++.+....+.+.+.+.. .+..++.++.+|+.+
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN------SNHENVVFHQLDVTD 73 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT------TTCCSEEEEECCTTS
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------cCCCceEEEEccCCC
Confidence 447888897754 555555442 367999999998766555444422 234579999999864
No 462
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=67.20 E-value=57 Score=27.56 Aligned_cols=105 Identities=15% Similarity=0.111 Sum_probs=59.2
Q ss_pred ceEEEEcCcc-c-HHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc-ccCccCCCCcc
Q 025492 67 IQFADIGCGF-G-GLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK-YIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G-~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~-~l~~~~~~~s~ 143 (252)
..|.=||+|. | .++..+++......++++|.+++.++.+.+ . +... . ...|..+ .+ ...
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~------G~~~-~-~~~~~~~~~~------~~a 95 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----L------GIID-E-GTTSIAKVED------FSP 95 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----T------TSCS-E-EESCTTGGGG------GCC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----C------CCcc-h-hcCCHHHHhh------ccC
Confidence 3688899885 3 233344444322389999999987655432 1 2210 1 1223221 11 246
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeCch-HHHHHHHHHH
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITDVE-ELGDWMRSCL 200 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td~~-~~~~~~~~~~ 200 (252)
|.|++.-|... ...+++++...|++|..+.-.+-.. .....+.+.+
T Consensus 96 DvVilavp~~~-----------~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 96 DFVMLSSPVRT-----------FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp SEEEECSCGGG-----------HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred CEEEEeCCHHH-----------HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc
Confidence 88888776532 1358888999999988776544333 3344455444
No 463
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=67.15 E-value=71 Score=28.63 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=58.3
Q ss_pred eEEEEcCcccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHH------h-hcCCC--CcccEEEEeCCcccccCccC
Q 025492 68 QFADIGCGFGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILAL------R-VSNPG--QYQNISVVRTNSMKYIPNYF 138 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~------~-~~~~~--~~~nv~~~~~da~~~l~~~~ 138 (252)
.|.=||+|.=...++..-...+..|+++|++++.++.+...+... + ..... .....++ ..|.. .+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-~~---- 112 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-EL---- 112 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG-GG----
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH-HH----
Confidence 588899987222222222233678999999998887766543211 0 00000 0111233 33431 12
Q ss_pred CCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 139 EKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 139 ~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
...|.|+...|+... +...+++++...++|+..|...|-
T Consensus 113 --~~aDlVIeaVpe~~~---------~k~~v~~~l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 113 --STVDLVVEAVFEDMN---------LKKKVFAELSALCKPGAFLCTNTS 151 (463)
T ss_dssp --TTCSEEEECCCSCHH---------HHHHHHHHHHHHSCTTCEEEECCS
T ss_pred --CCCCEEEEcCCCCHH---------HHHHHHHHHHhhCCCCeEEEeCCC
Confidence 246889888775431 112578888889988877765443
No 464
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=66.80 E-value=37 Score=28.56 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=56.3
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |. ..+......|+..++.+|.+++..+.+.+ .. +.+. ...|..+ .+ +..+|.
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~---~~------g~~~---~~~~~~~----~l-~~~~D~ 66 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLAT---RY------RVSA---TCTDYRD----VL-QYGVDA 66 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHH---HT------TCCC---CCSSTTG----GG-GGCCSE
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH---Hc------CCCc---cccCHHH----Hh-hcCCCE
Confidence 467789986 43 12233334567777789999875543322 11 2221 1223222 23 346899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|++.-|+.. ..+.+...|+.|=.+++. +.+..-...+.+...+.+.
T Consensus 67 V~i~tp~~~--------------h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~ 115 (323)
T 1xea_A 67 VMIHAATDV--------------HSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQ 115 (323)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTC
T ss_pred EEEECCchh--------------HHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCC
Confidence 999877554 233344556665444442 2233445566666665543
No 465
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=66.70 E-value=17 Score=30.82 Aligned_cols=105 Identities=10% Similarity=0.056 Sum_probs=54.7
Q ss_pred eEEEEcCcccHH---HHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 68 QFADIGCGFGGL---LISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~G~~---~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
.|-=||||.... +..+ ..++..++ .+|.+++..+.+.+.. + .+. ...|..+. +.+..+
T Consensus 6 rvgiiG~G~~~~~~~~~~l--~~~~~~lvav~d~~~~~~~~~a~~~---------~--~~~-~~~~~~~l----l~~~~~ 67 (336)
T 2p2s_A 6 RFAAIGLAHNHIYDMCQQL--IDAGAELAGVFESDSDNRAKFTSLF---------P--SVP-FAASAEQL----ITDASI 67 (336)
T ss_dssp EEEEECCSSTHHHHHHHHH--HHTTCEEEEEECSCTTSCHHHHHHS---------T--TCC-BCSCHHHH----HTCTTC
T ss_pred EEEEECCChHHHHHhhhhh--cCCCcEEEEEeCCCHHHHHHHHHhc---------C--CCc-ccCCHHHH----hhCCCC
Confidence 577899997553 2222 23677765 4588876543332211 1 111 13444432 335579
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.. -.+.+...|+.|-.+++. +-+.+-+..+.+...+.+
T Consensus 68 D~V~i~tp~~~--------------h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g 117 (336)
T 2p2s_A 68 DLIACAVIPCD--------------RAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETG 117 (336)
T ss_dssp CEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHC
T ss_pred CEEEEeCChhh--------------HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 99999887655 223344455555545442 123344555555554443
No 466
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=66.04 E-value=30 Score=27.66 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=47.0
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE-- 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~-- 139 (252)
..++|=.|++. .++.++|+.. .+.+++.++.+.+.++.+.+.+.. ...++.++.+|+.+. +...+.
T Consensus 9 ~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-------DGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 44788899765 4455555542 367899999998877665554433 234788999997631 111111
Q ss_pred ---CCcccEEEEe
Q 025492 140 ---KGQLTKMFFL 149 (252)
Q Consensus 140 ---~~s~d~i~~~ 149 (252)
-+.+|.++.+
T Consensus 81 ~~~~g~id~li~~ 93 (253)
T 3qiv_A 81 LAEFGGIDYLVNN 93 (253)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHHcCCCCEEEEC
Confidence 1367887765
No 467
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=65.87 E-value=59 Score=27.22 Aligned_cols=120 Identities=8% Similarity=0.019 Sum_probs=59.5
Q ss_pred eEEEEcCcccHH--HHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGFGGL--LISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~G~~--~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||+|.=.. +..|+...-...++.+|++++.++.....+..... ....++.+...|. +.+ ...|.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~d~-~~~------~~aDv 72 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLEAHGNIVINDW-AAL------ADADV 72 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSSSCCEEEESCG-GGG------TTCSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcCCCeEEEeCCH-HHh------CCCCE
Confidence 466789876322 23344442125799999998766544332221100 0011344433443 222 24688
Q ss_pred EEEeCCCCccc--cccccccc----cC----HHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHH
Q 025492 146 MFFLFPDPHFK--EKNHRRRV----IS----PHLLDEYAYVLGVGGIIYTITDVEELGDWMRSC 199 (252)
Q Consensus 146 i~~~fpdP~~k--~~h~krr~----~~----~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~ 199 (252)
|++..+.|... .... .|+ .+ ..+++.+.+. .|++.+++.|+..+...++...
T Consensus 73 Viiav~~~~~~~~~~g~-~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~~tNp~~~~~~~~~~ 134 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTG-DRFAELKFTSSMVQSVGTNLKES-GFHGVLVVISNPVDVITALFQH 134 (309)
T ss_dssp EEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHH
T ss_pred EEEecCCcccCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEcCcHHHHHHHHHH
Confidence 88887765410 0000 010 01 2344444443 4789988888776665544444
No 468
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=65.42 E-value=21 Score=28.91 Aligned_cols=59 Identities=5% Similarity=-0.033 Sum_probs=38.1
Q ss_pred CceEEEEcC-ccc--HHH-HHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGC-GFG--GLL-ISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGc-G~G--~~~-~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|+ |.| ..+ ..|++. +.+++.++.+...++.+.+.+.. .+..++.++.+|+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLAD------LGLGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHT------TCSSCEEEEECCTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHh------cCCCceEEEEeCCCC
Confidence 347888887 553 322 334444 67899999998876655544422 234579999999863
No 469
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=64.85 E-value=29 Score=30.35 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=41.2
Q ss_pred CceEEEEcCcccHHHHHHHHHCC-CCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 66 KIQFADIGCGFGGLLISLSTLFP-EVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p-~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
..+|.=||||.|.+-+....+.| +..++|| |.+++..+ +...+ .+.+ ...|..+. +. .+
T Consensus 7 ~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~a~---~~a~~------~gv~----~~~~~~~l----~~--~~ 67 (372)
T 4gmf_A 7 KQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSR---ELAHA------FGIP----LYTSPEQI----TG--MP 67 (372)
T ss_dssp CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHHHH---HHHHH------TTCC----EESSGGGC----CS--CC
T ss_pred CCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHHHH---HHHHH------hCCC----EECCHHHH----hc--CC
Confidence 44788899998876554444455 4677775 77765432 22222 2433 24565542 22 48
Q ss_pred cEEEEeCCCCcc
Q 025492 144 TKMFFLFPDPHF 155 (252)
Q Consensus 144 d~i~~~fpdP~~ 155 (252)
|.+++.-|++..
T Consensus 68 D~v~i~~p~~~h 79 (372)
T 4gmf_A 68 DIACIVVRSTVA 79 (372)
T ss_dssp SEEEECCC--CT
T ss_pred CEEEEECCCccc
Confidence 999998887653
No 470
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=64.33 E-value=24 Score=28.50 Aligned_cols=59 Identities=14% Similarity=0.039 Sum_probs=40.0
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|++.| ++.++|+.+ .+.+|+.++.+.+.++.+.+.+... ..++.++.+|+.+
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-------GGRIVARSLDARN 67 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-------TCEEEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEECcCCC
Confidence 457888898765 444444432 2678999999988766665554331 3478999999753
No 471
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=64.05 E-value=35 Score=28.13 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=41.4
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=-|.+.| +..++|+.+ .+++++.+|.+++.++.+.+.+... -.++.++.+|+.+
T Consensus 7 gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSK 67 (254)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCC
Confidence 457888897776 455555442 3789999999998877766655442 2468899999753
No 472
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=63.95 E-value=34 Score=30.35 Aligned_cols=110 Identities=9% Similarity=0.003 Sum_probs=57.2
Q ss_pred ceEEEEcCcc-cH-HHHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCccc--EEEEeCCcccccCccCCCC
Q 025492 67 IQFADIGCGF-GG-LLISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQN--ISVVRTNSMKYIPNYFEKG 141 (252)
Q Consensus 67 ~~vLDIGcG~-G~-~~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~n--v~~~~~da~~~l~~~~~~~ 141 (252)
-.|.=||||. |. ..+......++..++ .+|.+++..+.+.+ . .+.+. +. ...|..+ .+.+.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~---~------~g~~~~~~~-~~~~~~~----ll~~~ 149 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAA---E------YGVDPRKIY-DYSNFDK----IAKDP 149 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHH---H------TTCCGGGEE-CSSSGGG----GGGCT
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH---H------hCCCccccc-ccCCHHH----HhcCC
Confidence 4788899975 32 122222234566665 56888765433222 1 13321 22 2334433 34455
Q ss_pred cccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 142 QLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 142 s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
.+|.|++.-|+.+ -.+.+...|+.|-.+++. +-+.+-...+.+...+.+
T Consensus 150 ~vD~V~iatp~~~--------------h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 201 (433)
T 1h6d_A 150 KIDAVYIILPNSL--------------HAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN 201 (433)
T ss_dssp TCCEEEECSCGGG--------------HHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchh--------------HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhC
Confidence 7899999887665 233444556666555542 223444555666555444
No 473
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=63.58 E-value=33 Score=28.54 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=47.2
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE-- 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~-- 139 (252)
+.++|=.|++.| ++.++|+.. .+.++++++.+.+.++.+.+.+.. ...++.++.+|+.+. +...+.
T Consensus 31 gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 31 GRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-------QGFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHHH
Confidence 457888998854 444444432 367899999999877665554433 134688999997631 111111
Q ss_pred ---CCcccEEEEe
Q 025492 140 ---KGQLTKMFFL 149 (252)
Q Consensus 140 ---~~s~d~i~~~ 149 (252)
.+.+|.++.+
T Consensus 103 ~~~~g~id~lvnn 115 (301)
T 3tjr_A 103 FRLLGGVDVVFSN 115 (301)
T ss_dssp HHHHSSCSEEEEC
T ss_pred HHhCCCCCEEEEC
Confidence 1367887765
No 474
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=63.57 E-value=31 Score=29.47 Aligned_cols=108 Identities=8% Similarity=0.076 Sum_probs=59.6
Q ss_pred eEEEEcCcc-cH-HHHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 68 QFADIGCGF-GG-LLISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 68 ~vLDIGcG~-G~-~~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
.|.=||||. |. +........|+..+++| |.+ ..-+.+ ... +..++.+ ..|..+. +.+..+|
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a----~~~------~~~~~~~-~~~~~~l----l~~~~~D 67 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAA----APF------KEKGVNF-TADLNEL----LTDPEIE 67 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHH----HHH------HTTTCEE-ESCTHHH----HSCTTCC
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHH----Hhh------CCCCCeE-ECCHHHH----hcCCCCC
Confidence 577799997 44 34444555788888765 444 211111 111 2233443 3455443 3356799
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
.|++.-|+.. -.+.+...|+.|-.+++. +.+.+-+..+.+...+.+.
T Consensus 68 ~V~i~tp~~~--------------h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~ 117 (349)
T 3i23_A 68 LITICTPAHT--------------HYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGV 117 (349)
T ss_dssp EEEECSCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCcHH--------------HHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 9999877654 234455666766555542 2234556666666666544
No 475
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=63.23 E-value=48 Score=27.59 Aligned_cols=89 Identities=7% Similarity=0.026 Sum_probs=50.5
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|+=||+|. |......+..+ +.+++++|.++...+.+. .. +. .++..+ .+...+ ...|
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~----~~------g~---~~~~~~---~l~~~l--~~aD 215 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIA----EM------GM---EPFHIS---KAAQEL--RDVD 215 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HT------TS---EEEEGG---GHHHHT--TTCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHH----HC------CC---eecChh---hHHHHh--cCCC
Confidence 45788899876 44444444444 468999999986543221 11 22 222211 122222 2568
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|++.-|.. ++... ....|++|+.++-..
T Consensus 216 vVi~~~p~~----------~i~~~----~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 216 VCINTIPAL----------VVTAN----VLAEMPSHTFVIDLA 244 (293)
T ss_dssp EEEECCSSC----------CBCHH----HHHHSCTTCEEEECS
T ss_pred EEEECCChH----------HhCHH----HHHhcCCCCEEEEec
Confidence 888887652 23333 344689999887655
No 476
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=63.23 E-value=25 Score=30.76 Aligned_cols=78 Identities=9% Similarity=0.065 Sum_probs=42.5
Q ss_pred ceEEEEcCcc----cHHHHHHHHHCCCCeEEE-E-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCcc-CC
Q 025492 67 IQFADIGCGF----GGLLISLSTLFPEVLMIG-M-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNY-FE 139 (252)
Q Consensus 67 ~~vLDIGcG~----G~~~~~lA~~~p~~~~iG-i-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~-~~ 139 (252)
-.|.=||||. |..-+......++..+++ | |.+++..+.+.+ . .+.+... ...|..+.+... ..
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~---~------~g~~~~~-~~~~~~~ll~~~~~~ 82 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGE---Q------LGVDSER-CYADYLSMFEQEARR 82 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHH---H------TTCCGGG-BCSSHHHHHHHHTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHH---H------hCCCcce-eeCCHHHHHhccccc
Confidence 3788999996 443333344456677876 4 998875443322 2 1332111 134544433210 01
Q ss_pred CCcccEEEEeCCCCc
Q 025492 140 KGQLTKMFFLFPDPH 154 (252)
Q Consensus 140 ~~s~d~i~~~fpdP~ 154 (252)
+..+|.|++.-|+..
T Consensus 83 ~~~vD~V~i~tp~~~ 97 (398)
T 3dty_A 83 ADGIQAVSIATPNGT 97 (398)
T ss_dssp TTCCSEEEEESCGGG
T ss_pred CCCCCEEEECCCcHH
Confidence 145999999877654
No 477
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=62.74 E-value=41 Score=27.25 Aligned_cols=61 Identities=5% Similarity=-0.076 Sum_probs=40.3
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
..++|=.|++.| ++.++|+.+ .+.+|+.++.+.+.++.+.+.+... .+..++.++.+|+.+
T Consensus 8 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 8 EAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQR-----FPGARLFASVCDVLD 70 (265)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----STTCCEEEEECCTTC
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCceEEEEeCCCCC
Confidence 457888998765 444444432 2678999999988776665544332 133458899999753
No 478
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=62.73 E-value=6.1 Score=33.96 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=53.6
Q ss_pred eEEEE-cCc-ccHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCC---cccccCccCCCCc
Q 025492 68 QFADI-GCG-FGGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTN---SMKYIPNYFEKGQ 142 (252)
Q Consensus 68 ~vLDI-GcG-~G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~d---a~~~l~~~~~~~s 142 (252)
.||=. |+| .|..++.+|+.. +.++++++.+++.++.+++ + +.+. ++..+ ..+.+........
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----~------Ga~~--~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKD----I------GAAH--VLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHH----H------TCSE--EEETTSTTHHHHHHHHHHHHC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----c------CCCE--EEECCcHHHHHHHHHHhcCCC
Confidence 45433 555 377778888876 5699999999887766643 2 3322 22211 1111111111124
Q ss_pred ccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 143 LTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 143 ~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+|.|+-.-. ...+..+.+.|++||++++..
T Consensus 234 ~D~vid~~g---------------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 234 PRIFLDAVT---------------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCEEEESSC---------------HHHHHHHHHHSCTTCEEEECC
T ss_pred CcEEEECCC---------------ChhHHHHHhhhcCCCEEEEEe
Confidence 777764332 134577889999999998863
No 479
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=62.42 E-value=32 Score=28.24 Aligned_cols=77 Identities=9% Similarity=0.074 Sum_probs=46.7
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE-- 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~-- 139 (252)
+..+|=.|++ |.++..+++.. .+.++++++.++..++.....+... +..++.++.+|+.+. +...+.
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL------GAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------TCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh------CCCceEEEeCCCCCHHHHHHHHHHH
Confidence 3478888875 44555555431 2678999999987766554444332 334788999997631 111111
Q ss_pred ---CCcccEEEEe
Q 025492 140 ---KGQLTKMFFL 149 (252)
Q Consensus 140 ---~~s~d~i~~~ 149 (252)
-+.+|.++.+
T Consensus 101 ~~~~g~iD~li~n 113 (286)
T 1xu9_A 101 GKLMGGLDMLILN 113 (286)
T ss_dssp HHHHTSCSEEEEC
T ss_pred HHHcCCCCEEEEC
Confidence 1367887765
No 480
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=61.49 E-value=45 Score=27.79 Aligned_cols=89 Identities=9% Similarity=0.034 Sum_probs=50.8
Q ss_pred CceEEEEcCcc-cHHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 66 KIQFADIGCGF-GGLLISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 66 ~~~vLDIGcG~-G~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
...|+=||+|. |......+..+ +.+++++|.++...+.+. .. + +..+..+ .+...+ ...|
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~----~~------g---~~~~~~~---~l~~~l--~~aD 217 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARIT----EM------G---LVPFHTD---ELKEHV--KDID 217 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HT------T---CEEEEGG---GHHHHS--TTCS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH----HC------C---CeEEchh---hHHHHh--hCCC
Confidence 45799999976 44444444444 568999999986443221 11 2 2222211 122222 2568
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
.|+..-|... +... ....+|+|+.++-..
T Consensus 218 vVi~~~p~~~----------i~~~----~~~~mk~g~~lin~a 246 (300)
T 2rir_A 218 ICINTIPSMI----------LNQT----VLSSMTPKTLILDLA 246 (300)
T ss_dssp EEEECCSSCC----------BCHH----HHTTSCTTCEEEECS
T ss_pred EEEECCChhh----------hCHH----HHHhCCCCCEEEEEe
Confidence 9998877532 3322 346789998876654
No 481
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=61.42 E-value=47 Score=27.41 Aligned_cols=102 Identities=12% Similarity=0.136 Sum_probs=56.5
Q ss_pred eEEEEcCcccHHHHHHHHH--CCCCeEEEEecCHhHHHHHHHHHHHH-hhcCCCC-----------cccEEEEeCCcccc
Q 025492 68 QFADIGCGFGGLLISLSTL--FPEVLMIGMELRDKVTEYVKERILAL-RVSNPGQ-----------YQNISVVRTNSMKY 133 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~--~p~~~~iGiDis~~~i~~a~~~~~~~-~~~~~~~-----------~~nv~~~~~da~~~ 133 (252)
.|.=||+|. ++..+|.. ..+..|+++|++++.++.+.+.+... ......+ ..++.+ ..|..+.
T Consensus 6 kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 6 NVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred EEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 466678875 33333322 23678999999999887776653221 0000000 122333 2333221
Q ss_pred cCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 134 IPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 134 l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+ ...|.|+...|.... +...+++++...++++..+.-.|
T Consensus 83 ~------~~aDlVi~av~~~~~---------~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 83 V------KDADLVIEAVPESLD---------LKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp T------TTCSEEEECCCSCHH---------HHHHHHHHHHHHSCTTCEEEECC
T ss_pred h------ccCCEEEEeccCcHH---------HHHHHHHHHHhhCCCCcEEEECC
Confidence 2 246888888776421 11258888999999888765333
No 482
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=61.33 E-value=44 Score=28.01 Aligned_cols=106 Identities=12% Similarity=0.079 Sum_probs=54.1
Q ss_pred eEEEEcCcc-cHHHHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccE
Q 025492 68 QFADIGCGF-GGLLISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTK 145 (252)
Q Consensus 68 ~vLDIGcG~-G~~~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~ 145 (252)
.|.=||||. |...+......++..++ .+|.+++..+... + ..+. .. ...|..+. + +..+|.
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~----~-----~~~~--~~-~~~~~~~~----l-~~~~D~ 65 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFA----S-----RYQN--IQ-LFDQLEVF----F-KSSFDL 65 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHG----G-----GSSS--CE-EESCHHHH----H-TSSCSE
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH----H-----HcCC--Ce-EeCCHHHH----h-CCCCCE
Confidence 466789986 33333333345666665 5687775432211 1 0121 12 23454432 3 446899
Q ss_pred EEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe---CchHHHHHHHHHHhcCC
Q 025492 146 MFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT---DVEELGDWMRSCLENHP 204 (252)
Q Consensus 146 i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~~ 204 (252)
|++.-|+.+ ....+...|+.|-.+++.. .+.+-...+.+...+.+
T Consensus 66 V~i~tp~~~--------------h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g 113 (325)
T 2ho3_A 66 VYIASPNSL--------------HFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNN 113 (325)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTT
T ss_pred EEEeCChHH--------------HHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcC
Confidence 999887655 2233334555555555432 23344555555555544
No 483
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=60.78 E-value=37 Score=28.68 Aligned_cols=109 Identities=11% Similarity=-0.040 Sum_probs=58.9
Q ss_pred eEEEEcCcccHHHHHHHHH--CCC-CeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeC-CcccccCccCCCCcc
Q 025492 68 QFADIGCGFGGLLISLSTL--FPE-VLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRT-NSMKYIPNYFEKGQL 143 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~--~p~-~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~-da~~~l~~~~~~~s~ 143 (252)
.|.=||+|. ++..+|.. ..+ ..+++.|.+++..+.+......... .+. .. +..+.+ ...
T Consensus 26 ~IgvIG~G~--mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~---~g~------~~~s~~e~~------~~a 88 (317)
T 4ezb_A 26 TIAFIGFGE--AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE---LGV------EPLDDVAGI------ACA 88 (317)
T ss_dssp EEEEECCSH--HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH---TTC------EEESSGGGG------GGC
T ss_pred eEEEECccH--HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH---CCC------CCCCHHHHH------hcC
Confidence 577889875 33333332 225 7899999997321111111111110 132 22 333222 245
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe-CchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT-DVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t-d~~~~~~~~~~~~~~~~ 204 (252)
|.|++..|++... ..++.+...|++|..++-.+ -.......+.+.+.+.+
T Consensus 89 DvVi~avp~~~~~-----------~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g 139 (317)
T 4ezb_A 89 DVVLSLVVGAATK-----------AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGK 139 (317)
T ss_dssp SEEEECCCGGGHH-----------HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSS
T ss_pred CEEEEecCCHHHH-----------HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 8899888776532 35677888888887766544 33455556666666543
No 484
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=60.64 E-value=44 Score=27.96 Aligned_cols=106 Identities=9% Similarity=0.070 Sum_probs=58.6
Q ss_pred ceEEEEcCcc-cHHHHHHHHHCCCCeEE-EEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCccc
Q 025492 67 IQFADIGCGF-GGLLISLSTLFPEVLMI-GMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLT 144 (252)
Q Consensus 67 ~~vLDIGcG~-G~~~~~lA~~~p~~~~i-GiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d 144 (252)
-.|.=||||. |...+......++..++ .+|.+++..+. . . . .+. ...|..+. +.+..+|
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~-------~---~--~--~~~-~~~~~~~~----l~~~~~D 71 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLAL-------V---P--P--GCV-IESDWRSV----VSAPEVE 71 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTT-------C---C--T--TCE-EESSTHHH----HTCTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHH-------H---H--h--hCc-ccCCHHHH----hhCCCCC
Confidence 4688899996 54433434445666654 67888753211 1 1 1 122 23444332 3345789
Q ss_pred EEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 145 KMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 145 ~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
.|++.-|+.+ ....+...|+.|-.+++. +-+.+-...+.+...+.+.
T Consensus 72 ~V~i~tp~~~--------------h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 72 AVIIATPPAT--------------HAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp EEEEESCGGG--------------HHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred EEEEeCChHH--------------HHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 9999887654 333444567777655553 2234455666666655543
No 485
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=60.58 E-value=48 Score=27.86 Aligned_cols=61 Identities=13% Similarity=0.049 Sum_probs=41.1
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|++.| ++..+|+.. .+.+|++++.+...++.+...+... ....++.++.+|+.+
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-----GSGPEVMGVQLDVAS 70 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----TCGGGEEEEECCTTC
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCCeEEEEECCCCC
Confidence 347898998754 455555542 3678999999998776665554432 223479999999753
No 486
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=60.53 E-value=35 Score=27.61 Aligned_cols=76 Identities=9% Similarity=0.000 Sum_probs=47.3
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE-- 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~-- 139 (252)
+.++|=.|++. .++..+|+.. .+.+++.++.+.+.++.+.+.+.. ...++.++.+|+.+. +...+.
T Consensus 29 ~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 29 GQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-------AGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-------hCCceeEEEecCCCHHHHHHHHHHH
Confidence 45788889764 4555555542 367899999998876665554433 234789999997531 111111
Q ss_pred ---CCcccEEEEe
Q 025492 140 ---KGQLTKMFFL 149 (252)
Q Consensus 140 ---~~s~d~i~~~ 149 (252)
-+.+|.++.+
T Consensus 101 ~~~~g~id~lv~~ 113 (262)
T 3rkr_A 101 LAAHGRCDVLVNN 113 (262)
T ss_dssp HHHHSCCSEEEEC
T ss_pred HHhcCCCCEEEEC
Confidence 1468887765
No 487
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=60.47 E-value=33 Score=31.17 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=56.6
Q ss_pred eEEEEcCcccHHHHHHHH-HCCCC-eEEEEecCHh----HHHHHHHHHHHHhhc--CCCC----------cccEEEEeCC
Q 025492 68 QFADIGCGFGGLLISLST-LFPEV-LMIGMELRDK----VTEYVKERILALRVS--NPGQ----------YQNISVVRTN 129 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~-~~p~~-~~iGiDis~~----~i~~a~~~~~~~~~~--~~~~----------~~nv~~~~~d 129 (252)
.|-=||+|.=...++..- ..|+. .|+++|++++ .++..++... .. ...+ ..++.+ ..|
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~---~i~~~e~gl~~l~~~~~~~g~l~~-ttd 95 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGES---PLKGEEPGLEELIGKVVKAGKFEC-TPD 95 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCC---CSSCCGGGHHHHHHHHHHTTCEEE-ESC
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCC---CccccCCCHHHHHHhhcccCCeEE-eCc
Confidence 577788887443333222 23467 8999999998 6654322000 00 0000 123443 233
Q ss_pred cccccCccCCCCcccEEEEeCCCCcccccc--ccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 130 SMKYIPNYFEKGQLTKMFFLFPDPHFKEKN--HRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 130 a~~~l~~~~~~~s~d~i~~~fpdP~~k~~h--~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
. +.+ ...|.|++..|.|...... ..-+. -....+.+...|++|-.++..+
T Consensus 96 ~-ea~------~~aDvViiaVptp~~~~~~~~~dl~~-v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 96 F-SRI------SELDAVTLAIQTPFANPKDLEPDFSA-LIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp G-GGG------GGCSEEEECCCCCCCSSCCSSCCCHH-HHHHHHHHHHHCCTTCEEEECS
T ss_pred H-HHH------hcCCEEEEecCCchhccCCccccHHH-HHHHHHHHHhhcCCCcEEEEeC
Confidence 2 222 2468999999988633211 00000 0234577888899988776643
No 488
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=59.92 E-value=24 Score=30.33 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=59.0
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEEEE-ecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMIGM-ELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~iGi-Dis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. ........|+..++|| |.+++.+ . . ..+.+.. ..|..+. +.+..+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~---~---------~--~~~~~~~-~~~~~~l----l~~~~v 66 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS---K---------E--RYPQASI-VRSFKEL----TEDPEI 66 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG---G---------T--TCTTSEE-ESCSHHH----HTCTTC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH---H---------H--hCCCCce-ECCHHHH----hcCCCC
Confidence 3678899997 432 3444456788888765 7765421 1 0 1223333 3555443 345679
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHP 204 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~ 204 (252)
|.|++.-|+.. -.+.+...|+-|-.+++. +.+.+-+..+.+...+.+
T Consensus 67 D~V~i~tp~~~--------------H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 116 (362)
T 3fhl_A 67 DLIVVNTPDNT--------------HYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKG 116 (362)
T ss_dssp CEEEECSCGGG--------------HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred CEEEEeCChHH--------------HHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 99999877654 233445566666555553 224444555665555443
No 489
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=59.85 E-value=80 Score=26.80 Aligned_cols=121 Identities=7% Similarity=-0.038 Sum_probs=61.4
Q ss_pred eEEEEcCcccHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
.|.=||+|+=..++...-...+. .++.+|++++.++.....+...-. ......++... .|. +.+ ...|.|
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~-~~~~~~~i~~t-~d~-~al------~~aD~V 76 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNV-MAYSNCKVSGS-NTY-DDL------AGADVV 76 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHH-HHTCCCCEEEE-CCG-GGG------TTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhh-hcCCCcEEEEC-CCH-HHh------CCCCEE
Confidence 57788987633333222222233 699999999876543332221100 00011223321 343 222 245888
Q ss_pred EEeCCCCcccccccc----ccc--------cCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHH
Q 025492 147 FFLFPDPHFKEKNHR----RRV--------ISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCL 200 (252)
Q Consensus 147 ~~~fpdP~~k~~h~k----rr~--------~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~ 200 (252)
++....|.- .... .|. +-..+++.+.+.. |++.+++.|+..+...++....
T Consensus 77 i~a~g~p~k--~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~t~~~~~~ 139 (322)
T 1t2d_A 77 IVTAGFTKA--PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQH 139 (322)
T ss_dssp EECCSCSSC--TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHH
T ss_pred EEeCCCCCC--CCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHHHHHHHHh
Confidence 877644431 1100 011 2234555555554 9999999998877766665444
No 490
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=59.47 E-value=50 Score=26.53 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=39.9
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
+.++|=.|++.| ++.++|+.+ .+.+++.++.+.+.++.+.+.+... ..+..++.++.+|+.+
T Consensus 7 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 7 KGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRS----NKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH----CTTSCCCEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----ccccCcceEEeccCCC
Confidence 457888998765 344443331 2678999999998776665554432 1122578899999763
No 491
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=59.27 E-value=78 Score=26.85 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=60.6
Q ss_pred ceEEEEcCcc-cHH-HHHHHHHCCCCeEEE-EecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcc
Q 025492 67 IQFADIGCGF-GGL-LISLSTLFPEVLMIG-MELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQL 143 (252)
Q Consensus 67 ~~vLDIGcG~-G~~-~~~lA~~~p~~~~iG-iDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~ 143 (252)
-.|.=||||. |.. ........|+..++| +|.+++..+ + ....+.+ ..|..+. +.+..+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-------~-------~~~~~~~-~~~~~~l----l~~~~v 68 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-------A-------DWPAIPV-VSDPQML----FNDPSI 68 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-------T-------TCSSCCE-ESCHHHH----HHCSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-------h-------hCCCCce-ECCHHHH----hcCCCC
Confidence 3688899997 442 444455667888775 577765321 1 1222322 3455443 335679
Q ss_pred cEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEE---eCchHHHHHHHHHHhcCCC
Q 025492 144 TKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTI---TDVEELGDWMRSCLENHPM 205 (252)
Q Consensus 144 d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~---td~~~~~~~~~~~~~~~~~ 205 (252)
|.|++.-|+.+ -.+.+...|+-|-.+++. +.+.+-+..+.+...+.+.
T Consensus 69 D~V~i~tp~~~--------------H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~ 119 (352)
T 3kux_A 69 DLIVIPTPNDT--------------HFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGL 119 (352)
T ss_dssp CEEEECSCTTT--------------HHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCChHH--------------HHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 99999887765 233445566666555553 2234455566666665543
No 492
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=59.08 E-value=5.4 Score=33.72 Aligned_cols=53 Identities=13% Similarity=0.101 Sum_probs=34.7
Q ss_pred cCccCCC--CcccEEEEeCCCCccccccccc-----cccCHHHHHHHHHhhcCCcEEEEEeC
Q 025492 134 IPNYFEK--GQLTKMFFLFPDPHFKEKNHRR-----RVISPHLLDEYAYVLGVGGIIYTITD 188 (252)
Q Consensus 134 l~~~~~~--~s~d~i~~~fpdP~~k~~h~kr-----r~~~~~~l~~~~~~LkpgG~l~~~td 188 (252)
|+..+++ +.+|.|++|...|.. -||-. -+-...+-....+.|+|||.+++..-
T Consensus 201 L~lG~P~~~grYDlVfvNv~TpyR--~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 201 LELGLPATLGRYDLVVINIHTPFR--IHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp GGGCCCGGGCCEEEEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred cccCCCCcCCceeEEEEecCCccc--cchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 4434443 789999999998873 23311 11123455566789999999999763
No 493
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=58.72 E-value=40 Score=30.18 Aligned_cols=115 Identities=16% Similarity=0.199 Sum_probs=59.9
Q ss_pred eEEEEcCcccHH--HHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHHhhcCCCC----------cccEEEEeCCcccccC
Q 025492 68 QFADIGCGFGGL--LISLSTLFPEVLMIGMELRDKVTEYVKERILALRVSNPGQ----------YQNISVVRTNSMKYIP 135 (252)
Q Consensus 68 ~vLDIGcG~G~~--~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~----------~~nv~~~~~da~~~l~ 135 (252)
..-=||+|.=.. +..||+. +..|+|+|++++.++..++.. . .....+ ..++.+- .|+
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~--~-pi~epgl~~ll~~~~~~g~l~~t-td~----- 81 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQ--I-SIEEPGLQEVYEEVLSSGKLKVS-TTP----- 81 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC--C-SSCCTTHHHHHHHHHHTTCEEEE-SSC-----
T ss_pred ccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCC--C-CcCCCCHHHHHHhhcccCceEEe-Cch-----
Confidence 455578876322 2334444 678999999998776543210 0 000001 1123331 121
Q ss_pred ccCCCCcccEEEEeCCCCccccccccccccC---HHHHHHHHHhhcCCcEEEEEe-CchHHHHHHHHHH
Q 025492 136 NYFEKGQLTKMFFLFPDPHFKEKNHRRRVIS---PHLLDEYAYVLGVGGIIYTIT-DVEELGDWMRSCL 200 (252)
Q Consensus 136 ~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~---~~~l~~~~~~LkpgG~l~~~t-d~~~~~~~~~~~~ 200 (252)
...|.|++..|+|.....+ ....- ....+.+...|++|-.++..| -.....+.+.+.+
T Consensus 82 -----~~aDvvii~VpTp~~~~~~--~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 82 -----EASDVFIIAVPTPNNDDQY--RSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp -----CCCSEEEECCCCCBCSSSS--CBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred -----hhCCEEEEEeCCCcccccc--CCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 2468999999998743210 01111 123466777888887666643 3344555555544
No 494
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=58.68 E-value=36 Score=29.05 Aligned_cols=102 Identities=10% Similarity=0.099 Sum_probs=58.5
Q ss_pred eEEEEcCcc-c-HHHHHHHHHCCCCeEEEEecCHhHHHHHHHHHHHH-hhcCCCC-----------cccEEEEeCCcccc
Q 025492 68 QFADIGCGF-G-GLLISLSTLFPEVLMIGMELRDKVTEYVKERILAL-RVSNPGQ-----------YQNISVVRTNSMKY 133 (252)
Q Consensus 68 ~vLDIGcG~-G-~~~~~lA~~~p~~~~iGiDis~~~i~~a~~~~~~~-~~~~~~~-----------~~nv~~~~~da~~~ 133 (252)
.|-=||+|. | .++..++.. +..|++.|++++.++.+.+.+... ......+ ..++.+. .|..+.
T Consensus 8 kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred eEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 577788875 2 333444444 678999999999888776543221 0000011 1234442 333222
Q ss_pred cCccCCCCcccEEEEeCCCCccccccccccccCHHHHHHHHHhhcCCcEEEEEe
Q 025492 134 IPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYVLGVGGIIYTIT 187 (252)
Q Consensus 134 l~~~~~~~s~d~i~~~fpdP~~k~~h~krr~~~~~~l~~~~~~LkpgG~l~~~t 187 (252)
+ ...|.|+..-|.... +...+++++...++|+-.|.-.|
T Consensus 85 v------~~aDlVieavpe~~~---------~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 85 V------EGVVHIQECVPENLD---------LKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp T------TTEEEEEECCCSCHH---------HHHHHHHHHHTTCCSSSEEEECC
T ss_pred H------hcCCEEEEeccCCHH---------HHHHHHHHHHhhCCCCeEEEEeC
Confidence 2 246888888775431 11257888888898888665433
No 495
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.62 E-value=52 Score=26.61 Aligned_cols=76 Identities=12% Similarity=0.031 Sum_probs=46.5
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccc--cCccCC--
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKY--IPNYFE-- 139 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~--l~~~~~-- 139 (252)
+.++|=.|++.| ++..+|+.+ .+.+++.++.+.+.++.+.+.+.. ...++.++.+|+.+. +...+.
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-------TGRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 457888998765 344444331 267899999998877665554433 134688999997631 111111
Q ss_pred ---CCcccEEEEe
Q 025492 140 ---KGQLTKMFFL 149 (252)
Q Consensus 140 ---~~s~d~i~~~ 149 (252)
-+.+|.++.+
T Consensus 83 ~~~~g~id~lv~n 95 (264)
T 3ucx_A 83 MKAYGRVDVVINN 95 (264)
T ss_dssp HHHTSCCSEEEEC
T ss_pred HHHcCCCcEEEEC
Confidence 1467877755
No 496
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=57.89 E-value=87 Score=26.59 Aligned_cols=121 Identities=15% Similarity=0.068 Sum_probs=61.2
Q ss_pred eEEEEcCcccHHHHHHHHHCCCC-eEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCcccccCccCCCCcccEE
Q 025492 68 QFADIGCGFGGLLISLSTLFPEV-LMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMKYIPNYFEKGQLTKM 146 (252)
Q Consensus 68 ~vLDIGcG~G~~~~~lA~~~p~~-~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~~l~~~~~~~s~d~i 146 (252)
.|.=||+|+=..+++..-...+. .++.+|++++.++.....+..... ......++... .|. +.+ ...|.|
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~-~~~~~~~i~~t-~d~-~al------~~aD~V 86 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMA-LIGSPAKIFGE-NNY-EYL------QNSDVV 86 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHH-HHTCCCCEEEE-SCG-GGG------TTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhh-ccCCCCEEEEC-CCH-HHH------CCCCEE
Confidence 68889987633333322222244 699999999877643322222100 00012234432 343 222 245888
Q ss_pred EEeCCCCccccccccc-cc------cCHHHHHHHHHhhcCCcEEEEEeCchHHHHHHHHHH
Q 025492 147 FFLFPDPHFKEKNHRR-RV------ISPHLLDEYAYVLGVGGIIYTITDVEELGDWMRSCL 200 (252)
Q Consensus 147 ~~~fpdP~~k~~h~kr-r~------~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~ 200 (252)
++..+.|. | ....| -+ +-..+++.+.+. .|++.+++.|+..+...++....
T Consensus 87 I~avg~p~-k-~g~tr~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~~~~t~~~~~~ 144 (328)
T 2hjr_A 87 IITAGVPR-K-PNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFVICITNPLDAMVYYFKEK 144 (328)
T ss_dssp EECCSCCC-C-TTCCSGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHHHHHHHHHHH
T ss_pred EEcCCCCC-C-CCCchhhHHhhhHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHHHHHHh
Confidence 88765443 1 11100 00 112344555554 39999988898777665555443
No 497
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=57.19 E-value=7.9 Score=33.51 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=29.8
Q ss_pred CceEEEEcCcccHHHHHHHHHCCC----CeEEEEecCH
Q 025492 66 KIQFADIGCGFGGLLISLSTLFPE----VLMIGMELRD 99 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~p~----~~~iGiDis~ 99 (252)
+..||=+|++.|.++..|+..+++ ..++.+|..+
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~ 113 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRH 113 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCc
Confidence 349999999999999999998765 7899999776
No 498
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=57.01 E-value=33 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=23.6
Q ss_pred CCceEEEEcC--cccHHHHHHHHHCCCCeEEE-EecCH
Q 025492 65 KKIQFADIGC--GFGGLLISLSTLFPEVLMIG-MELRD 99 (252)
Q Consensus 65 ~~~~vLDIGc--G~G~~~~~lA~~~p~~~~iG-iDis~ 99 (252)
+...||=+|+ |.|.+++.+|+.. ++.+++ ++.++
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRP 203 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCcc
Confidence 3568999997 4588899999986 455544 44443
No 499
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=56.03 E-value=38 Score=26.88 Aligned_cols=58 Identities=9% Similarity=0.040 Sum_probs=38.4
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNS 130 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da 130 (252)
+.++|=.|++. .++..+|+.. .+.+++.++.++..++.+.+.+... +..++.++..|+
T Consensus 14 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~d~ 73 (247)
T 3i1j_A 14 GRVILVTGAAR-GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA------GQPQPLIIALNL 73 (247)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TSCCCEEEECCT
T ss_pred CCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc------CCCCceEEEecc
Confidence 44788889764 4555555542 3678999999988776665555432 345677777776
No 500
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=55.36 E-value=51 Score=26.14 Aligned_cols=59 Identities=8% Similarity=0.037 Sum_probs=38.5
Q ss_pred CceEEEEcCcccHHHHHHHHHC--CCCeEEEEecCHhHHHHHHHHHHHHhhcCCCCcccEEEEeCCccc
Q 025492 66 KIQFADIGCGFGGLLISLSTLF--PEVLMIGMELRDKVTEYVKERILALRVSNPGQYQNISVVRTNSMK 132 (252)
Q Consensus 66 ~~~vLDIGcG~G~~~~~lA~~~--p~~~~iGiDis~~~i~~a~~~~~~~~~~~~~~~~nv~~~~~da~~ 132 (252)
..++|=.|++. .++..+|+.. .+.++++++.++...+.....+.. ...++.++.+|+.+
T Consensus 5 ~k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-------KGFKARGLVLNISD 65 (247)
T ss_dssp TCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-------TTCCEEEEECCTTC
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEecCCC
Confidence 34788888664 4454444431 267899999998876655544433 12468899999753
Done!