BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025495
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36591|DYR_SCHPO Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dfr1 PE=2 SV=2
Length = 461
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 51 FEWFQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGK--- 107
F WF+ Y + +E + + +Y+ GPFDGL+GFSQGA + A+L G+
Sbjct: 73 FGWFEVEDFKNTYGSWDESLECINQYMQEKGPFDGLIGFSQGAGIGAMLAQMLQPGQPPN 132
Query: 108 VLKEHPPMKLFVSISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLP---SEELATA 164
+HPP K V + G + P + Y S H G D L +P S++L
Sbjct: 133 PYVQHPPFKFVVFVGGFRAEKPEF-DHFYNPKLTTPSLHIAGTSDTL-VPLARSKQLVER 190
Query: 165 FHNPLIIRHPQGHTVPR 181
N ++ HP H VP+
Sbjct: 191 CENAHVLLHPGQHIVPQ 207
>sp|A4II73|OVCA2_XENTR Ovarian cancer-associated gene 2 protein homolog OS=Xenopus
tropicalis GN=ovca2 PE=2 SV=2
Length = 230
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 54 FQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHP 113
F +E + LE + + + + GPFDG+LGFSQGA L A++ + QG P
Sbjct: 88 FDAMEESKTCSGLEAPLDTVAKAFSELGPFDGILGFSQGAALVAIICALKQQGD-----P 142
Query: 114 PMKLFVSISGSKFRDPSICEVA-YKDTFNVKSAHFIGAKDWL--KLPSEELATAFHNPLI 170
+I + F+ S Y+ V S H IG D + S+EL + F NP+I
Sbjct: 143 RFHFDFAILVAGFKSLSTDHAKHYQQPITVPSLHVIGETDRVISAAMSQELVSHFENPVI 202
Query: 171 IRHPQGHTVP 180
+ H GH VP
Sbjct: 203 LMHSGGHYVP 212
>sp|Q99369|FSH3_YEAST Family of serine hydrolases 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FSH3 PE=1 SV=1
Length = 266
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 51 FEWFQFNKE-FTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVL 109
+ WF N E F + ++ +YL Y+ NGPFDG++GFSQGA L L+ ++L
Sbjct: 77 YGWFFRNPESFNSFQIDQKVFNYLRNYVLENGPFDGVIGFSQGAGLGGYLV--TDFNRIL 134
Query: 110 ----KEHPPMKLFVSISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLPSEELATAF 165
++ P +K F+S SG K D S + Y V S H G D + S +A
Sbjct: 135 NLTDEQQPALKFFISFSGFKLEDQSY-QKEYHRIIQVPSLHVRGELDEVVAESRIMALYE 193
Query: 166 HNP----LIIRHPQGHTVP 180
P ++ HP H VP
Sbjct: 194 SWPDNKRTLLVHPGAHFVP 212
>sp|Q18169|U483_CAEEL UPF0483 protein C25G4.2 OS=Caenorhabditis elegans GN=C25G4.2 PE=3
SV=1
Length = 221
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 57 NKEFTEY-TNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPM 115
++E TE EE V+ + ++I NGPFDGLLGFSQGA++ LL+ G++ + P +
Sbjct: 72 SRESTEVAVGFEESVAAVVKFIEENGPFDGLLGFSQGASMVHLLIAKAQLGEI--KLPGI 129
Query: 116 KLFVSISG-----SKFRDPSICEVAYKDTFNVKSAHFIGAKDWL--KLPSEELATAFH-N 167
+ + SG SK ++ + S H G D + + SE++A F
Sbjct: 130 RFAIFFSGFLSLSSKHDSLTLLRIK-----EFPSMHVFGDADEIVARPKSEKMADMFDVE 184
Query: 168 PLIIRHPQGHTVPRLDEAATELLRGWTVDILRCNNRGLNNN 208
PL I H GH VP + + E + G+ + L +R + NN
Sbjct: 185 PLRIAHDGGHVVPSMSK-HKEKIAGFMREQL---DRKIENN 221
>sp|P38777|FSH1_YEAST Family of serine hydrolases 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FSH1 PE=1 SV=1
Length = 243
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 30/153 (19%)
Query: 53 WFQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEH 112
WF ++ E + ++ E + + ++I +NGP+DG++GFSQGA LS+++ ++ ++ +H
Sbjct: 74 WF-YHSEISHELDISEGLKSVVDHIKANGPYDGIVGFSQGAALSSIITNKISE--LVPDH 130
Query: 113 PPMKLFVSISGSKFRDPS--------ICEVAYKDTFNVK-----SAHFI-GAKDWLKLPS 158
P K+ V ISG F +P I E ++D+F VK FI GA D +PS
Sbjct: 131 PQFKVSVVISGYSFTEPDPEHPGELRITE-KFRDSFAVKPDMKTKMIFIYGASDQ-AVPS 188
Query: 159 EELATAF-----------HNPLIIRHPQGHTVP 180
+ L HP GH VP
Sbjct: 189 VRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVP 221
>sp|Q61YZ4|U483_CAEBR UPF0483 protein CBG03338 OS=Caenorhabditis briggsae GN=CBG03338
PE=3 SV=1
Length = 220
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 64 TNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISG 123
+E V+ + ++I NGPFDGLLGFSQGA++ LL+ G++ + P ++ + SG
Sbjct: 80 VGFDESVNAVVKFIEDNGPFDGLLGFSQGASMVHLLIAKAQLGEI--KLPGIRFAIFFSG 137
Query: 124 ---SKFRDPSICEVAYKDTFNVKSAHFIGAKDWL--KLPSEELATAFH-NPLIIRHPQGH 177
+ ++ + KD S H G D + + SE+LA F P+ I H GH
Sbjct: 138 FLSLSSKHDTLTSLRIKD---FPSMHVFGDSDEIVARPKSEKLADQFDMEPIRIAHEGGH 194
Query: 178 TVPRLD---EAATELLR 191
VP + E T+ LR
Sbjct: 195 LVPSMSKHKERITQFLR 211
>sp|Q05015|FSH2_YEAST Family of serine hydrolases 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FSH2 PE=1 SV=1
Length = 223
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 18/140 (12%)
Query: 53 WFQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQ------G 106
W + + Y + + YL Y+ NGPF G++GFSQGA ++ GY A G
Sbjct: 73 WLENDPSTGGYFIPQTTIDYLHNYVLENGPFAGIVGFSQGAGVA----GYLATDFNGLLG 128
Query: 107 KVLKEHPPMKLFVSISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLPSEELATAFH 166
+E PP++ F+++SG +F+ E +V S H G D + P++ +
Sbjct: 129 LTTEEQPPLEFFMAVSGFRFQPQQYQEQYDLHPISVPSLHVQGELDTITEPAK--VQGLY 186
Query: 167 NPL------IIRHPQGHTVP 180
N ++ H GH VP
Sbjct: 187 NSCTEDSRTLLMHSGGHFVP 206
>sp|Q9VDL1|U483_DROME UPF0483 protein CG5412 OS=Drosophila melanogaster GN=CG5412 PE=2
SV=1
Length = 279
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 66 LEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVS--ISG 123
+E + + E + GPF GLLGFSQGA L+ G A+ K+ P + S +SG
Sbjct: 109 FQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLICGL-AKKKLTSIRPEFAVLASGFLSG 167
Query: 124 SKFRDPSICEVAYKDTFNVKSAHFIGAKDWL--KLPSEELATAFHNPLIIRHPQGHTVP 180
S + AY++ ++ + H G D + K SE LA F N ++ H GH P
Sbjct: 168 SL-----VHMSAYEEAISIPTLHIYGQTDEIIPKEMSESLAARFKNAEVLEHSGGHYFP 221
>sp|O13897|YF36_SCHPO Uncharacterized hydrolase C22A12.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22A12.06c PE=3 SV=1
Length = 429
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 53 WFQFNKEFTEYTNLE--ECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLK 110
W++ N E+ + LE + YL YI +GPFDG+LGFSQG L+A L K +
Sbjct: 78 WWRIN-EYADTKQLEPTKAFEYLASYIKEHGPFDGILGFSQGTNLAANLAALVTIPKYQE 136
Query: 111 --EHPPMKLFVSISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWL--KLPSEELATAFH 166
PP + + SG FR + + ++ + H +G D + S L A
Sbjct: 137 YFSQPPFRFALFFSG-YFRPLLMDGAVHATKLDLPTLHLLGKYDTVLSTETSTTLVRACK 195
Query: 167 NPLIIRHPQGHTVP 180
+ ++ HP H +P
Sbjct: 196 DAQVLFHPAAHQIP 209
>sp|Q503Y4|OVCA2_DANRE Ovarian cancer-associated gene 2 protein homolog OS=Danio rerio
GN=ovca2 PE=2 SV=1
Length = 227
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 54 FQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHP 113
F ++ LEE + + + GPF G+LGFSQGA L A+L Q Q K P
Sbjct: 84 FNAKQDCESSLGLEESIEAVKAALKDLGPFSGILGFSQGAALVAMLCALQEQ----KLEP 139
Query: 114 PMKLFVSISGSKFRDPSICEVAYKD--TFNVKSAHFIGAKDWLKLP---SEELATAFHNP 168
+I + FR + + + + S H G D + +P S +L AF
Sbjct: 140 DFNFRFAILVAGFRSACLEHQRFYEGPVITIPSLHVFGQDDRV-IPEEMSRDLLPAFDGA 198
Query: 169 LIIRHPQGHTVP 180
++ HP GH VP
Sbjct: 199 QVLLHPGGHFVP 210
>sp|Q9D7E3|OVCA2_MOUSE Ovarian cancer-associated gene 2 protein homolog OS=Mus musculus
GN=Ovca2 PE=2 SV=1
Length = 225
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 10 FRNNLASGILLFLLTSTWYFPDGIFPAGGKSDIEGIFP--PPYFEWFQ------FN--KE 59
R L L L+ P+ P G D P P WF F+ +E
Sbjct: 29 LRKTLRGRAELVCLSGPHPVPEAAAPEGSCPDSGPCSPEEQPRGWWFSEEEADVFSALEE 88
Query: 60 FTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFV 119
T L+E + + + + GPFDGLLGFSQGA L+A + A G+ P+ F+
Sbjct: 89 STVCRGLQEALETVARALDTLGPFDGLLGFSQGAALAAYVC---ALGQAGDPRFPLPRFI 145
Query: 120 SISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLPSEE---LATAFHNPLIIRHPQG 176
I S F + E + ++ S H G D + +PS+E LA+ F + + H G
Sbjct: 146 -ILVSGFCPRGLKEPILQSPMSLPSLHVFGDTDRV-IPSQESMQLASRFLGAVTLTHSGG 203
Query: 177 HTVP 180
H +P
Sbjct: 204 HFIP 207
>sp|Q7QBJ0|U483_ANOGA UPF0483 protein AGAP003155 OS=Anopheles gambiae GN=AGAP003155 PE=3
SV=3
Length = 266
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 85 GLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISGSKFRDPSICEVAY-KDTFNVK 143
GLLGFSQGA LL A+G MK ++ S FR S+ + Y ++ +
Sbjct: 109 GLLGFSQGACFVGLLCDLSARGMTT-----MKPQFAVVASGFRSGSLVHLNYYENKVQIP 163
Query: 144 SAHFIGAKDWL--KLPSEELATAFHNPLIIRHPQGHTVPRLDEAATELLRGWTVDILR 199
S H G D + K SE LA F +P ++ HP GH P A L+ VD R
Sbjct: 164 SLHIFGETDEIITKDMSEALAETFLDPEVVTHPGGHYFP-----AQASLKETYVDFFR 216
>sp|Q94AC1|STR6_ARATH Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana
GN=STR6 PE=2 SV=1
Length = 581
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 61 TEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVS 120
T+ ++ ++YL GPFDG+LGFSQGA ++A + G Q Q L + V
Sbjct: 443 TQTEGFDKSLTYLKTAFEEKGPFDGILGFSQGAAMAAAVCGKQEQ---LVGEIDFRFCVL 499
Query: 121 ISGSKFRDPSICEVAYKDTFNVKSAHFIGA-----KDWLKLPSEELATAFHN--PLIIRH 173
SG F + E+ K + S H G+ + + S +LA F + I+ H
Sbjct: 500 CSG--FTPWPLLEMKEKRSIKCPSLHIFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEH 557
Query: 174 PQGHTVP 180
GH +P
Sbjct: 558 DFGHIIP 564
>sp|Q29BR3|U483_DROPS UPF0483 protein GA18864 OS=Drosophila pseudoobscura pseudoobscura
GN=GA18864 PE=3 SV=1
Length = 289
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 66 LEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVS--ISG 123
++ + + E + GPF GLLGFSQGA L+ G A+ K+ P + S +SG
Sbjct: 109 FQDSLRLVEEAWKTQGPFQGLLGFSQGACFVGLICGL-AKKKLTSIRPEFAVLSSGFVSG 167
Query: 124 SKFRDPSICEVAYKDTFNVKSAHFIGAKDWL--KLPSEELATAFHNPLIIRHPQGHTVP 180
S + AY++ ++ + H G+ D + K S LA+ F N ++ H GH P
Sbjct: 168 SL-----VHMSAYEEPVSIPTLHIYGSSDEIIPKDMSALLASHFKNVEVLEHGGGHYFP 221
>sp|Q0C7C4|U483_AEDAE UPF0483 protein AAEL000016 OS=Aedes aegypti GN=AAEL000016 PE=3 SV=1
Length = 275
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 85 GLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISGSKFRDPSICEV-AYKDTFNVK 143
GLLGFSQGA LL A+G +K ++ S FR S+ + Y+ +
Sbjct: 124 GLLGFSQGACFVGLLCDLSARGMT-----SIKPEFAVLSSGFRSGSLVHLNCYETKVQIP 178
Query: 144 SAHFIGAKDWL--KLPSEELATAFHNPLIIRHPQGHTVP 180
S H G D + K S LA F +P I+ HP GH +P
Sbjct: 179 SLHIYGEADEIIPKEMSMALADTFTDPQILTHPGGHFLP 217
>sp|Q3SZ07|OVCA2_BOVIN Ovarian cancer-associated gene 2 protein homolog OS=Bos taurus
GN=OVCA2 PE=2 SV=1
Length = 227
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 58 KEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKL 117
+E T LEE + + + + GPFDG+LGFSQGA L+AL+ G P +
Sbjct: 87 EEPTACRGLEEALETVAQALNKLGPFDGILGFSQGAALAALVCALGQGGD--PRFPLPRF 144
Query: 118 FVSISGSKFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLPSEE---LATAFHNPLIIRHP 174
+ +SG R + E + ++ S H G D + +PS+E L + F + + H
Sbjct: 145 VILVSGFCPRGLGLMEPIMQGPLSLPSLHVFGDTDGV-IPSQESMQLCSRFDGAVTLTHS 203
Query: 175 QGHTVP 180
GH +P
Sbjct: 204 GGHFIP 209
>sp|Q8WZ82|OVCA2_HUMAN Ovarian cancer-associated gene 2 protein OS=Homo sapiens GN=OVCA2
PE=1 SV=1
Length = 227
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 65 NLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISGS 124
LEE + + + + GPFDGLLGFSQGA L+AL+ G P + + +SG
Sbjct: 94 GLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCALGQAGD--PRFPLPRFILLVSGF 151
Query: 125 KFRDPSICEVAYKDTFNVKSAHFIGAKDWLKLPSEE---LATAFHNPLIIRHPQGHTVP 180
R E + ++ S H G D + +PS+E LA+ F + + H GH +P
Sbjct: 152 CPRGIGFKESILQRPLSLPSLHVFGDTDKV-IPSQESVQLASQFPGAITLTHSGGHFIP 209
>sp|Q6C4I9|ERB1_YARLI Ribosome biogenesis protein ERB1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ERB1 PE=3 SV=1
Length = 820
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 170 IIRHPQGHTVPRLDEAATELLRGWTVDILRCNNRGLNNNYDEMENGLIENVQKEPRTEND 229
I+R G + L E +L GWT + + +GLN + +E+E LI+ +QK T++
Sbjct: 197 IMRPATGSALDNLLET-IDLPEGWTGLLDKSTGKGLNISKEELE--LIKRIQKNETTDDA 253
Query: 230 SK--EEMINANAGKTEVEVLDAA 250
S E+++ + KTE+ L AA
Sbjct: 254 SNPYEDLVEWFSSKTEIMPLSAA 276
>sp|O34984|YODQ_BACSU Uncharacterized metallohydrolase YodQ OS=Bacillus subtilis (strain
168) GN=yodQ PE=3 SV=1
Length = 436
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 92 GATLSALLLGYQAQGKVLKEHPPMKLFVSISGSKF 126
TLSA++ GY+A G ++ E MKLF+ GS +
Sbjct: 175 AGTLSAIMRGYRADGALIPEPTNMKLFIKQQGSMW 209
>sp|Q6Q2Z6|ACOT5_MOUSE Acyl-coenzyme A thioesterase 5 OS=Mus musculus GN=Acot5 PE=1 SV=2
Length = 421
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 67 EECVSYLTEYITSNGPFDGLLGFSQGATLS 96
EE V+YL + GP GLLG S+GA LS
Sbjct: 209 EEAVTYLLSHPQVKGPGVGLLGISKGAELS 238
>sp|Q6ZBH9|NCKP1_ORYSJ Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2
SV=1
Length = 1359
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 170 IIRHPQGHTVPRLDEAATELLRGWTVDILRCNNRGLNNNYDEMENGLIENVQKEPRTEND 229
++R G+ V RLD+ LLR T +L C + L +N D +E GL +V R E D
Sbjct: 936 LVRLFGGYGVDRLDK----LLREHTSALLNCIDSALRSNRDALE-GLAGSVNSGDRIERD 990
Query: 230 SKEEMI 235
+ + I
Sbjct: 991 ANLKQI 996
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,259,254
Number of Sequences: 539616
Number of extensions: 4734505
Number of successful extensions: 12089
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 12059
Number of HSP's gapped (non-prelim): 31
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)