BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025496
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8W6|LC7L3_PONAB Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 146/235 (62%), Gaps = 17/235 (7%)
Query: 7 LLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRIHDQ 66
LLDELMG RNL +EK+ ++WD + VC +Y+ FCP +LF NTRSDLGPC +IHD+
Sbjct: 7 LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 64
Query: 67 KLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPPPIS 124
L++ +EKS R +E + ++ + L+ +++RR+RRG R LSQ + + +
Sbjct: 65 NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 122
Query: 125 AEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEK-----TTLTQQSQ 179
+ E++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ TT T +S
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIES- 181
Query: 180 NDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
AQEK+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E K
Sbjct: 182 -----FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELK 231
>sp|O95232|LC7L3_HUMAN Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2
Length = 432
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 146/235 (62%), Gaps = 17/235 (7%)
Query: 7 LLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRIHDQ 66
LLDELMG RNL +EK+ ++WD + VC +Y+ FCP +LF NTRSDLGPC +IHD+
Sbjct: 7 LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 64
Query: 67 KLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPPPIS 124
L++ +EKS R +E + ++ + L+ +++RR+RRG R LSQ + + +
Sbjct: 65 NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 122
Query: 125 AEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEK-----TTLTQQSQ 179
+ E++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ TT T +S
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIES- 181
Query: 180 NDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
AQEK+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E K
Sbjct: 182 -----FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELK 231
>sp|Q3SX41|LC7L3_BOVIN Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 146/235 (62%), Gaps = 17/235 (7%)
Query: 7 LLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRIHDQ 66
LLDELMG RNL +EK+ ++WD + VC +Y+ FCP +LF NTRSDLGPC +IHD+
Sbjct: 7 LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 64
Query: 67 KLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPPPIS 124
L++ +EKS R +E + ++ + L+ +++RR+RRG R LSQ + + +
Sbjct: 65 NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 122
Query: 125 AEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEK-----TTLTQQSQ 179
+ E++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ TT T +S
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIES- 181
Query: 180 NDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
AQEK+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E K
Sbjct: 182 -----FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELK 231
>sp|Q5SUF2|LC7L3_MOUSE Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1
Length = 432
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 7 LLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRIHDQ 66
LLDELMG RNL +EK+ ++WD + VC +Y+ FCP +LF NTRSDLGPC +IHD+
Sbjct: 7 LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 64
Query: 67 KLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPPPIS 124
L++ +EKS R +E + ++ + L+ +++RR+RRG R LSQ + + +
Sbjct: 65 NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 122
Query: 125 AEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVL 184
+ E++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ L + +
Sbjct: 123 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESF 182
Query: 185 MMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
AQEK+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E K
Sbjct: 183 -AAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELK 231
>sp|Q54XQ8|LUC7L_DICDI Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1
Length = 360
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 141/254 (55%), Gaps = 29/254 (11%)
Query: 1 MDAQRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTR-SDLGP 59
MDA RA LDE +G RNL +++ + E ++D ++C F++ CPH+LF N DLGP
Sbjct: 1 MDAIRAQLDEFLGKDRNLLPKDRIKV-ENDFNDPDICKFFLCGLCPHELFTNANIRDLGP 59
Query: 60 CPRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVE--- 116
C ++HD+ + ++ + D Y +E E + E L+ D D++++R +ERL Q
Sbjct: 60 CSKLHDENCVKQYQNNKDKDKY--DYEREWVRVIEGLISDNDKKIKRNKERLLQNPNGDA 117
Query: 117 -----PAPPPPIS------------AEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEA 159
P IS E++ +++ L+ KI+ LL++ E LGE G++ EA+A
Sbjct: 118 NHHGGPIQQQSISQLDDEEGGLLPDKEQNSKITELDLKIQELLKKAEELGEEGQITEAQA 177
Query: 160 LMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQ 219
LM + + L +K L + Q + K+M++CEICG+ L D +R+ SH+ GK+
Sbjct: 178 LMTEADELKNQKVELEKIEQ-----EKNENKRMSVCEICGALLFVGDKEKRSISHLEGKK 232
Query: 220 HIGYGMVRDFITEY 233
HIG+ +R+ + EY
Sbjct: 233 HIGFQKIREVMEEY 246
>sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l
PE=2 SV=2
Length = 371
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 130/238 (54%), Gaps = 13/238 (5%)
Query: 1 MDAQ---RALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDL 57
M AQ RALLD+LMG AR+ E ++ +K+ D VC +++ CPHD+ TR DL
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQR----VKFTDDRVCKSHLLDCCPHDILAGTRMDL 56
Query: 58 GPCPRIHDQKLKESFE-KSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVE 116
G C +IHD L+ +E S D + FE + E + + DRR ++RL+ E +
Sbjct: 57 GECTKIHDLALRADYEIASKERDLF---FELDAMDHLESFIAECDRRTELAKKRLA-ETQ 112
Query: 117 PAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQ 176
+SA K+E++ L E+I LL + E LG G VDE++ ++ +VE + +K +
Sbjct: 113 EEISAEVSA-KAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEE 171
Query: 177 QSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
+ +N Q++K+ +CE+C ++L +D R H GK H+G+ +R+ + + +
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLR 229
>sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L
PE=1 SV=1
Length = 371
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 130/238 (54%), Gaps = 13/238 (5%)
Query: 1 MDAQ---RALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDL 57
M AQ RALLD+LMG AR+ E ++ +K+ D VC +++ CPHD+ TR DL
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQR----VKFTDDRVCKSHLLDCCPHDILAGTRMDL 56
Query: 58 GPCPRIHDQKLKESFE-KSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVE 116
G C +IHD L+ +E S D + FE + E + + DRR ++RL+ E +
Sbjct: 57 GECTKIHDLALRADYEIASKERDLF---FELDAMDHLESFIAECDRRTELAKKRLA-ETQ 112
Query: 117 PAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQ 176
+SA K+E++ L E+I LL + E LG G VDE++ ++ +VE + +K +
Sbjct: 113 EEISAEVSA-KAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEE 171
Query: 177 QSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
+ +N Q++K+ +CE+C ++L +D R H GK H+G+ +R+ + + +
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLR 229
>sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2
PE=1 SV=2
Length = 392
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 129/240 (53%), Gaps = 17/240 (7%)
Query: 1 MDAQ---RALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDL 57
M AQ RA+LD+LMG +R+ ++ IK+ D VC +++ CPHD+ TR DL
Sbjct: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQR----IKFSDDRVCKSHLLNCCPHDVLSGTRMDL 56
Query: 58 GPCPRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEP 117
G C ++HD L+ +E + + + FE + + + D DRR ++RL++ E
Sbjct: 57 GECLKVHDLALRADYEIASKEQDFF--FELDAMDHLQSFIADCDRRTEVAKKRLAETQEE 114
Query: 118 APPPPISAE---KSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 174
ISAE K+E++ L E+I LL +VE LG G V+E++ +M +VE +K
Sbjct: 115 -----ISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREA 169
Query: 175 TQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
+ +N Q++K+ +CE+C ++L +D R H GK H+G+ +R+ + E K
Sbjct: 170 EEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELK 229
>sp|Q7TNC4|LC7L2_MOUSE Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2
PE=1 SV=1
Length = 392
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 129/240 (53%), Gaps = 17/240 (7%)
Query: 1 MDAQ---RALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDL 57
M AQ RA+LD+LMG +R+ ++ IK+ D VC +++ CPHD+ TR DL
Sbjct: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQR----IKFSDDRVCKSHLLNCCPHDVLSGTRMDL 56
Query: 58 GPCPRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEP 117
G C ++HD L+ +E + + + FE + + + D DRR ++RL++ E
Sbjct: 57 GECLKVHDLALRADYEIASKEQDFF--FELDAMDHLQSFIADCDRRTEVSKKRLAETQEE 114
Query: 118 APPPPISAE---KSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 174
ISAE K+E++ L E+I LL +VE LG G V+E++ +M +VE +K
Sbjct: 115 -----ISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREA 169
Query: 175 TQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYK 234
+ +N Q++K+ +CE+C ++L +D R H GK H+G+ +R+ + E K
Sbjct: 170 EEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELK 229
>sp|Q9USM4|LUC7_SCHPO U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1
Length = 264
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 22/234 (9%)
Query: 4 QRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRI 63
QR ++++LMG+ NL+ + + + D++VC ++ CPHD+F NT+ DLGPCP+I
Sbjct: 5 QRKIIEQLMGS--NLSNFTSRGL--VHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKI 60
Query: 64 HDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPI 123
H KLK +E++ Y +E + + E+ V D ++R+ ++ +
Sbjct: 61 HSDKLKSDYERASYSHDY--GYEWDYLEDLERHVDDCNKRIDIAE---ARREKTKEEEER 115
Query: 124 SAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKV 183
E + + I+ ++ ++E L + V++A ++ L + L D+V
Sbjct: 116 IDELMRDIIHTDHSIEVIITEMEALAKRKLVNDAVKHFIELNRLKTYRKELY-----DEV 170
Query: 184 LMMAQ--------EKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDF 229
+ M + +K+ +C+IC ++L D R H SGK H+GY M+R+
Sbjct: 171 ISMNEIPSQASTTHQKLQVCDICSAYLSRLDNDRRLADHFSGKMHLGYAMLRNI 224
>sp|Q07508|LUC7_YEAST Protein LUC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=LUC7 PE=1 SV=1
Length = 261
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 4 QRALLDELMGAARNLTEEEKKEYK-EIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPR 62
QR L+++LMG + K ++ D ++C Y+V CP+DLF T+ LG CP+
Sbjct: 11 QRKLVEQLMGRDFSFRHNRYSHQKRDLGLHDPKICKSYLVGECPYDLFQGTKQSLGKCPQ 70
Query: 63 IHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPP 122
+H K K +E+ + P+FE E + V + + ++ + L E
Sbjct: 71 MHLTKHKIQYEREVKQGKTFPEFEREYLAILSRFVNECNGQISVALQNLKHTAEERMKIQ 130
Query: 123 ISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQN-- 180
+ +E+L VL+ +I + +++++L A +V K++ L ++ + ++ +N
Sbjct: 131 ---QVTEELDVLDVRIGLMGQEIDSLIRADEVSMGMLQSVKLQELISKRKEVAKRVRNIT 187
Query: 181 DKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRD 228
+ V AQ+ K+ +CE+CG++L D R H GK H+GY +R+
Sbjct: 188 ENVGQSAQQ-KLQVCEVCGAYLSRLDTDRRLADHFLGKIHLGYVKMRE 234
>sp|Q09217|YP68_CAEEL Uncharacterized protein B0495.8 OS=Caenorhabditis elegans
GN=B0495.8 PE=2 SV=1
Length = 313
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 2 DAQRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTR-SDLGPC 60
D R ++ +LMG+ + KE + +D VC +++ CPHD+ ++R ++ C
Sbjct: 3 DQMRDMIAQLMGSQHV----DNKEKPSMPFDHHSVCRAFLLGVCPHDMVPDSRLQNVVSC 58
Query: 61 PRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
++H+ K +E++ + + ++ + + E V +D + + RE+L +V+
Sbjct: 59 RKVHEPAHKADYERAQKEKDHF--YDVDAFEIIEHAVHLVDIEIAKVREKLEDDVKTQTS 116
Query: 121 PPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQN 180
+ K++Q++ +EEKI ++ +E LG GK++E+ L + VE L EK + SQ
Sbjct: 117 QAADS-KAKQVAEIEEKIAKNVDDIEKLGNEGKIEESMKLHKYVEELR-EKIQEIEDSQT 174
Query: 181 D--KVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIG 222
+ + K+ +CE CG+ L D R H +GK HIG
Sbjct: 175 EVKTAGPGSNSAKLRVCEDCGAQLNITDHESRIADHYNGKMHIG 218
>sp|Q13IS7|TAUB3_BURXL Taurine import ATP-binding protein TauB 3 OS=Burkholderia
xenovorans (strain LB400) GN=tauB3 PE=3 SV=1
Length = 264
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 2 DAQRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDL-GPC 60
D Q L+DE MGA LT E +E W F++ LF+ TR L P
Sbjct: 150 DPQVLLMDEPMGALDALTRETMQELVLDVWGRTRKTIFFITHSVEEALFLATRLVLMTPG 209
Query: 61 P-RI---HDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRE 109
P RI H+ F S DA K E Q+ E+LV L RE
Sbjct: 210 PGRIAESHELPFARQFLAS--RDARAVKSSPEFIQWRERLVRRLHGEPHTARE 260
>sp|Q146E7|TAUB1_BURXL Taurine import ATP-binding protein TauB 1 OS=Burkholderia
xenovorans (strain LB400) GN=tauB1 PE=3 SV=1
Length = 265
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 2 DAQRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTR-SDLGPC 60
D Q L+DE MGA +T E +E W F++ LF+ TR + P
Sbjct: 154 DPQVLLMDEPMGALDAMTRESMQELVLDVWGRTRKTVFFITHSVEEALFLATRLVVMTPG 213
Query: 61 P-RI---HDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRR 103
P RI +D + F ++ DA K A+ ++ E+LV L R
Sbjct: 214 PGRIADSYDLPFAQRFLQT--RDARAVKSSADFIEWRERLVRRLHER 258
>sp|Q2HWD6|KIT_PIG Mast/stem cell growth factor receptor Kit OS=Sus scrofa GN=KIT PE=2
SV=1
Length = 972
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 96 LVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIK-------NLLEQVETL 148
V+ L RV+ G + S E PP I KSE + ++I+ ++ ETL
Sbjct: 12 FVLQLLLRVQTGSSQPSVSPEELSPPSIHPAKSELIVSAGDEIRLFCTDPGSVKWTFETL 71
Query: 149 GEAGKVDEAEALMRKVEILNVEKTTLTQQS 178
G+ + AE ++ K E +N T T +
Sbjct: 72 GQLSENTHAEWIVEKAEAMNTGNYTCTNEG 101
>sp|Q10660|DOM3Z_CAEEL Protein dom-3 OS=Caenorhabditis elegans GN=dom-3 PE=2 SV=1
Length = 393
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 83 PKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVL-----EEK 137
PKFE + A+F + ++ DR+++ GR R + + PP +S + + +EK
Sbjct: 56 PKFEKQ-AKFISEYCINYDRKLQLGRMRAKKFHDKLPPNNLSLDLGKGFETFDPKEGDEK 114
Query: 138 IKNLLEQVETLG-EAGK----VDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKM 192
I LLE + + E G+ + EA+ + + I + +T+ + + ++ + ++ +
Sbjct: 115 IIMLLEWINQMAPEGGRLKKVIHEADVVCWRGLITKI-CSTIYNKEEGWRIDAIKRKGVI 173
Query: 193 ALCE 196
LCE
Sbjct: 174 FLCE 177
>sp|Q54JV5|ARP8_DICDI Actin-related protein 8 OS=Dictyostelium discoideum GN=arpG PE=3
SV=1
Length = 873
Score = 32.0 bits (71), Expect = 3.8, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 98 MDLDRRVRRGRERLSQEVE-PAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDE 156
MD+D+ + + ++ ++ PPPPI+ + ++ + K LLE+VE V E
Sbjct: 134 MDIDKPITDSKTNITSNIKIEQPPPPINIQTQTKIHI----PKKLLEEVEQ-----SVKE 184
Query: 157 AEALMRKVEILNV-EKTTLTQQSQN 180
L+ V+ + V +K TL ++ +
Sbjct: 185 TTKLLPPVDYIKVRQKPTLYNENNS 209
>sp|Q29108|ZPBP1_PIG Zona pellucida-binding protein 1 OS=Sus scrofa GN=ZPBP PE=2 SV=1
Length = 350
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%), Gaps = 33/117 (28%)
Query: 61 PRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLD----------RRVRRGRER 110
PR + Q + +P + Y FE +L Q KLV+DL RV+ R
Sbjct: 166 PRYYYQ-FTARYHAAPCNSIYNISFEKKLLQILSKLVLDLSCEVSLLKSECHRVKMQRAG 224
Query: 111 LSQEV-------------EPAPPPPISAEKSEQLSVLEEKIKNLLE-----QVETLG 149
L E+ P P S E S++LS K KNL+E QVE LG
Sbjct: 225 LQNELFFTFSVSSLDTEKGPKPCAGHSCESSKRLS----KAKNLIERFFNQQVEVLG 277
>sp|Q310R5|MIAA_DESDG tRNA dimethylallyltransferase OS=Desulfovibrio desulfuricans
(strain G20) GN=miaA PE=3 SV=2
Length = 305
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 85 FEAELAQFCEKLVMDLDRRVRR--------GRERLSQEVEPAPPPPISAEKSEQLSVLEE 136
EA+ Q E+L + +R+ R GR +P PP P A K + L+
Sbjct: 141 LEAQDPQTAERLHPNDSQRIVRALEVQEATGRPLSWWHAQPVPPSPYRAVKIGVSATLDG 200
Query: 137 KIKNLLEQVETLGEAGKVDEAEALM 161
L +++E + AG +DEA M
Sbjct: 201 LTPRLAKRIEMMLAAGALDEARNAM 225
>sp|Q9WV48|SHAN1_RAT SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus
norvegicus GN=Shank1 PE=1 SV=1
Length = 2167
Score = 32.0 bits (71), Expect = 4.6, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 99 DLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAE 158
D+D V + + SQ+ + PPP IS S LEE + +++E + V E
Sbjct: 761 DMDEAVHK---KASQQAKRLPPPAISLRSKSMTSELEEMVSPWKKKIEYEQQPAAVPSME 817
Query: 159 ALMRKVEILNVEKTTLTQQSQN--DKVLMMAQE 189
+K T+ Q + N D++L AQ+
Sbjct: 818 -----------KKRTVYQMALNKLDEILAAAQQ 839
>sp|Q6SKR5|SPC25_XENLA Kinetochore protein Spc25 OS=Xenopus laevis GN=spc25 PE=1 SV=2
Length = 228
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 29 IKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAYVPKF 85
+K DD++ YM F F+N SD + Q LKES+++S DA+ K+
Sbjct: 4 LKMDDEQSLNVYMQEFRTR--FINKSSD-----EMTSQALKESYKESAATDAWFKKY 53
>sp|D3YZU1|SHAN1_MOUSE SH3 and multiple ankyrin repeat domains protein 1 OS=Mus musculus
GN=Shank1 PE=2 SV=1
Length = 2167
Score = 32.0 bits (71), Expect = 4.7, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 99 DLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAE 158
D+D V + + SQ+ + PPP IS S LEE + +++E + V E
Sbjct: 761 DMDEAVHK---KASQQAKRLPPPAISLRSKSMTSELEEMVSPWKKKIEYEQQPAAVPSME 817
Query: 159 ALMRKVEILNVEKTTLTQQSQN--DKVLMMAQE 189
+K T+ Q + N D++L AQ+
Sbjct: 818 -----------KKRTVYQMALNKLDEILAAAQQ 839
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 133 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQ---SQNDKVLMMAQE 189
++E IK+ V LG AG ++EAEAL++ + VE+ T+ S K+ +
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKN---MPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 190 KKMALC-------EICGSFLVANDAAE 209
K+ A C E CG L++N A
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYAS 473
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,592,433
Number of Sequences: 539616
Number of extensions: 3610437
Number of successful extensions: 18002
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 17831
Number of HSP's gapped (non-prelim): 318
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)