Query 025497
Match_columns 252
No_of_seqs 122 out of 438
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 11:30:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 1.3E-97 4E-102 657.4 24.8 239 8-249 1-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 4.7E-97 2E-101 656.4 25.3 238 4-244 24-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 1.7E-96 6E-101 646.6 22.3 230 10-242 7-236 (236)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.7E-94 9.2E-99 633.5 25.0 233 8-243 2-234 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 2E-94 6.8E-99 641.8 23.9 241 9-251 6-247 (260)
6 2npm_A 14-3-3 domain containin 100.0 5E-93 1.7E-97 632.3 24.5 232 10-244 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 3.7E-90 1.3E-94 613.7 15.9 227 10-247 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 9.7E-82 3.3E-86 548.9 20.7 217 10-239 2-226 (227)
9 3nf1_A KLC 1, kinesin light ch 94.7 1.5 5.2E-05 36.0 19.3 187 12-214 28-227 (311)
10 3edt_B KLC 2, kinesin light ch 94.5 1.5 5.2E-05 35.2 16.8 59 155-214 143-201 (283)
11 3vtx_A MAMA; tetratricopeptide 94.1 1.5 5.1E-05 33.7 16.8 163 12-210 6-169 (184)
12 3u3w_A Transcriptional activat 94.0 2.5 8.4E-05 35.7 16.7 58 155-214 171-228 (293)
13 3n71_A Histone lysine methyltr 93.7 0.77 2.6E-05 43.5 12.7 100 101-214 326-425 (490)
14 3qww_A SET and MYND domain-con 92.3 0.69 2.4E-05 43.1 9.9 100 101-214 315-414 (433)
15 3qwp_A SET and MYND domain-con 91.7 0.34 1.2E-05 45.0 7.0 58 156-214 346-403 (429)
16 4g1t_A Interferon-induced prot 91.6 5.1 0.00017 35.4 14.5 49 156-209 351-399 (472)
17 3edt_B KLC 2, kinesin light ch 91.1 1.1 3.9E-05 36.0 8.9 56 156-212 102-157 (283)
18 3u4t_A TPR repeat-containing p 90.9 5.4 0.00019 32.1 14.6 52 157-210 197-249 (272)
19 3qww_A SET and MYND domain-con 90.4 1.5 5E-05 40.8 10.0 58 156-214 315-372 (433)
20 3hym_B Cell division cycle pro 90.3 6.7 0.00023 32.3 15.1 46 155-209 252-297 (330)
21 1fch_A Peroxisomal targeting s 89.7 8.3 0.00028 32.5 14.9 60 11-75 98-157 (368)
22 3n71_A Histone lysine methyltr 89.6 1.8 6E-05 41.0 10.0 58 156-214 326-383 (490)
23 3ulq_A Response regulator aspa 89.4 3.1 0.0001 36.2 10.9 72 127-212 101-173 (383)
24 3fp2_A TPR repeat-containing p 89.0 12 0.00042 33.4 17.1 49 155-212 444-492 (537)
25 4a1s_A PINS, partner of inscut 87.5 13 0.00044 32.0 21.1 189 12-213 49-254 (411)
26 3qwp_A SET and MYND domain-con 87.5 0.71 2.4E-05 42.8 5.6 58 156-214 304-361 (429)
27 3nf1_A KLC 1, kinesin light ch 87.5 10 0.00035 30.8 15.0 28 12-39 70-97 (311)
28 4i17_A Hypothetical protein; T 87.1 9.8 0.00033 30.1 13.1 60 12-75 8-67 (228)
29 4gcn_A Protein STI-1; structur 86.2 2.1 7.3E-05 31.7 6.7 48 155-211 24-71 (127)
30 2xpi_A Anaphase-promoting comp 86.2 20 0.00067 32.6 19.0 47 155-210 532-578 (597)
31 3ulq_A Response regulator aspa 86.0 16 0.00055 31.5 16.4 176 16-213 108-295 (383)
32 3q15_A PSP28, response regulat 85.5 4.9 0.00017 35.0 9.8 75 126-213 98-172 (378)
33 4abn_A Tetratricopeptide repea 84.7 23 0.0008 32.2 17.5 174 11-210 102-286 (474)
34 3sf4_A G-protein-signaling mod 84.4 18 0.00061 30.6 18.3 53 156-212 204-257 (406)
35 3ro3_A PINS homolog, G-protein 84.3 9.3 0.00032 27.3 12.9 55 155-212 105-159 (164)
36 2y4t_A DNAJ homolog subfamily 83.2 22 0.00076 30.8 15.9 47 155-210 311-357 (450)
37 2pl2_A Hypothetical conserved 83.0 16 0.00055 29.1 13.4 57 13-74 7-63 (217)
38 2gw1_A Mitochondrial precursor 82.8 24 0.00083 31.0 15.0 55 155-210 205-265 (514)
39 3ro2_A PINS homolog, G-protein 82.5 18 0.00061 29.3 17.1 55 156-213 200-254 (338)
40 2y4t_A DNAJ homolog subfamily 81.9 25 0.00085 30.5 16.9 168 15-210 147-323 (450)
41 2q7f_A YRRB protein; TPR, prot 80.7 18 0.00062 28.2 16.8 60 11-75 57-116 (243)
42 3sf4_A G-protein-signaling mod 80.7 25 0.00085 29.7 20.8 189 12-213 10-218 (406)
43 2ho1_A Type 4 fimbrial biogene 80.6 19 0.00066 28.4 14.6 59 13-76 39-97 (252)
44 3rkv_A Putative peptidylprolyl 79.6 2.8 9.5E-05 31.8 5.1 54 156-210 28-91 (162)
45 3q15_A PSP28, response regulat 78.7 31 0.0011 29.7 16.1 53 155-211 238-290 (378)
46 3ro2_A PINS homolog, G-protein 78.6 25 0.00084 28.4 20.9 190 12-214 6-215 (338)
47 4eqf_A PEX5-related protein; a 78.5 29 0.001 29.2 17.3 59 12-75 66-124 (365)
48 4gyw_A UDP-N-acetylglucosamine 78.5 53 0.0018 32.2 15.9 174 5-217 5-180 (723)
49 3u3w_A Transcriptional activat 78.3 10 0.00036 31.7 8.9 53 156-212 132-185 (293)
50 3ro3_A PINS homolog, G-protein 78.2 6.7 0.00023 28.1 6.8 55 156-213 26-80 (164)
51 4gco_A Protein STI-1; structur 77.9 6.7 0.00023 28.9 6.7 46 156-210 30-75 (126)
52 2gw1_A Mitochondrial precursor 77.9 36 0.0012 29.9 15.9 172 12-210 305-477 (514)
53 2xpi_A Anaphase-promoting comp 77.4 41 0.0014 30.4 19.7 55 155-211 491-545 (597)
54 3ieg_A DNAJ homolog subfamily 75.5 32 0.0011 28.2 18.4 58 15-77 124-181 (359)
55 2qfc_A PLCR protein; TPR, HTH, 74.8 7.2 0.00024 32.7 6.9 56 155-212 171-226 (293)
56 2q7f_A YRRB protein; TPR, prot 74.2 28 0.00097 27.0 11.7 61 12-77 24-84 (243)
57 3hym_B Cell division cycle pro 74.1 34 0.0012 27.8 17.8 55 155-210 209-264 (330)
58 2vq2_A PILW, putative fimbrial 73.8 27 0.00093 26.5 15.9 166 12-211 9-176 (225)
59 4a1s_A PINS, partner of inscut 73.8 42 0.0014 28.6 18.0 182 13-213 88-294 (411)
60 1fch_A Peroxisomal targeting s 73.7 38 0.0013 28.2 18.5 58 12-74 65-122 (368)
61 3ieg_A DNAJ homolog subfamily 73.7 36 0.0012 27.9 19.5 61 11-76 154-214 (359)
62 4eqf_A PEX5-related protein; a 72.9 41 0.0014 28.3 16.2 60 11-75 99-158 (365)
63 3cv0_A Peroxisome targeting si 72.6 37 0.0013 27.5 15.9 28 12-39 22-49 (327)
64 3caz_A BAR protein; thermo-aci 72.4 42 0.0014 28.2 10.7 112 16-171 99-210 (294)
65 4gcn_A Protein STI-1; structur 71.5 12 0.00041 27.4 6.7 52 156-209 59-110 (127)
66 2l6j_A TPR repeat-containing p 71.4 13 0.00045 25.2 6.6 45 156-209 21-65 (111)
67 1elr_A TPR2A-domain of HOP; HO 71.4 12 0.00042 25.8 6.5 53 156-210 55-107 (131)
68 3gw4_A Uncharacterized protein 71.2 13 0.00044 28.3 7.1 55 156-212 83-137 (203)
69 3lf9_A 4E10_D0_1IS1A_001_C (T1 71.2 19 0.00066 27.8 7.7 50 25-74 11-60 (121)
70 4g1t_A Interferon-induced prot 71.1 8.5 0.00029 34.0 6.7 54 156-210 68-122 (472)
71 1lyp_A CAP18; lipopolysacchari 70.6 11 0.00038 21.7 4.7 27 90-116 4-30 (32)
72 3qky_A Outer membrane assembly 70.5 40 0.0014 27.1 15.8 65 11-79 15-81 (261)
73 1na3_A Designed protein CTPR2; 70.1 17 0.00059 23.6 6.7 47 155-210 25-71 (91)
74 4b4t_Q 26S proteasome regulato 69.6 54 0.0019 28.2 17.4 58 155-214 191-248 (434)
75 3k9i_A BH0479 protein; putativ 69.1 16 0.00054 25.8 6.8 47 156-211 44-90 (117)
76 1hz4_A MALT regulatory protein 68.5 15 0.00052 31.3 7.6 55 156-211 110-164 (373)
77 1xnf_A Lipoprotein NLPI; TPR, 68.2 43 0.0015 26.5 14.0 49 157-210 195-243 (275)
78 2xev_A YBGF; tetratricopeptide 67.6 25 0.00085 24.5 7.6 49 156-210 56-104 (129)
79 2kck_A TPR repeat; tetratricop 67.5 20 0.00067 23.9 6.7 46 156-210 23-68 (112)
80 3fp2_A TPR repeat-containing p 67.4 66 0.0023 28.4 17.6 53 158-210 214-271 (537)
81 3uq3_A Heat shock protein STI1 66.4 44 0.0015 26.0 15.0 28 12-39 80-107 (258)
82 3sz7_A HSC70 cochaperone (SGT) 65.8 25 0.00085 26.2 7.6 46 156-210 62-107 (164)
83 2dba_A Smooth muscle cell asso 65.7 16 0.00055 26.0 6.3 49 156-210 45-93 (148)
84 2kc7_A BFR218_protein; tetratr 65.3 24 0.00084 23.6 6.9 47 156-210 17-63 (99)
85 2ifu_A Gamma-SNAP; membrane fu 64.4 63 0.0021 27.1 12.8 52 155-209 171-222 (307)
86 2xev_A YBGF; tetratricopeptide 63.8 30 0.001 24.1 7.4 49 156-210 19-67 (129)
87 2qfc_A PLCR protein; TPR, HTH, 63.2 63 0.0022 26.7 21.5 189 12-225 76-276 (293)
88 3uq3_A Heat shock protein STI1 61.0 56 0.0019 25.3 15.3 28 12-39 39-66 (258)
89 3upv_A Heat shock protein STI1 61.0 28 0.00094 24.5 6.7 46 156-210 21-66 (126)
90 2pl2_A Hypothetical conserved 60.4 61 0.0021 25.6 18.8 47 11-61 39-85 (217)
91 4gco_A Protein STI-1; structur 60.1 28 0.00095 25.3 6.7 47 155-210 63-109 (126)
92 2lni_A Stress-induced-phosphop 59.9 30 0.001 23.8 6.7 46 156-210 67-112 (133)
93 2hr2_A Hypothetical protein; a 59.2 34 0.0012 27.3 7.5 55 155-211 27-86 (159)
94 3q49_B STIP1 homology and U bo 58.6 32 0.0011 24.2 6.7 17 195-211 90-106 (137)
95 1elr_A TPR2A-domain of HOP; HO 58.2 35 0.0012 23.3 6.8 50 155-213 20-69 (131)
96 3k9i_A BH0479 protein; putativ 57.2 14 0.00049 26.1 4.5 50 156-211 7-56 (117)
97 2xcb_A PCRH, regulatory protei 56.9 51 0.0018 23.9 7.9 48 156-212 69-116 (142)
98 3upv_A Heat shock protein STI1 56.7 36 0.0012 23.9 6.7 48 156-212 55-102 (126)
99 3vtx_A MAMA; tetratricopeptide 56.2 32 0.0011 25.8 6.7 47 155-210 21-67 (184)
100 2kat_A Uncharacterized protein 56.2 44 0.0015 23.0 7.1 50 155-213 35-84 (115)
101 3rkv_A Putative peptidylprolyl 56.0 58 0.002 24.0 8.7 46 156-210 80-125 (162)
102 1elw_A TPR1-domain of HOP; HOP 54.5 37 0.0013 22.6 6.2 46 156-210 55-100 (118)
103 3as5_A MAMA; tetratricopeptide 54.4 59 0.002 23.5 15.8 164 13-212 10-174 (186)
104 4gfq_A Ribosome-recycling fact 54.2 35 0.0012 28.8 6.9 69 45-118 127-199 (209)
105 1qqe_A Vesicular transport pro 54.2 34 0.0012 28.6 7.1 53 156-211 54-106 (292)
106 2vgx_A Chaperone SYCD; alterna 54.1 35 0.0012 25.5 6.6 47 156-211 72-118 (148)
107 2vyi_A SGTA protein; chaperone 53.8 46 0.0016 22.5 6.7 47 156-211 63-109 (131)
108 3ma5_A Tetratricopeptide repea 53.6 51 0.0017 22.6 9.6 73 155-242 23-95 (100)
109 3bee_A Putative YFRE protein; 53.5 27 0.00091 24.7 5.4 28 12-39 44-71 (93)
110 2vyi_A SGTA protein; chaperone 53.4 47 0.0016 22.5 6.7 47 156-211 29-75 (131)
111 2ifu_A Gamma-SNAP; membrane fu 53.3 98 0.0034 25.8 14.6 54 155-212 131-185 (307)
112 1a17_A Serine/threonine protei 52.0 45 0.0015 24.0 6.7 46 156-210 64-109 (166)
113 1elw_A TPR1-domain of HOP; HOP 52.0 49 0.0017 21.9 6.8 48 155-211 20-67 (118)
114 2dba_A Smooth muscle cell asso 51.3 49 0.0017 23.3 6.7 46 156-210 82-127 (148)
115 1ihg_A Cyclophilin 40; ppiase 51.1 16 0.00056 32.4 4.8 54 156-210 240-301 (370)
116 2fbn_A 70 kDa peptidylprolyl i 50.5 51 0.0017 25.3 7.2 49 156-210 55-116 (198)
117 1xnf_A Lipoprotein NLPI; TPR, 50.4 76 0.0026 24.9 8.4 47 155-210 93-139 (275)
118 3gyz_A Chaperone protein IPGC; 49.9 34 0.0012 26.2 5.9 47 155-210 86-132 (151)
119 4ga2_A E3 SUMO-protein ligase 49.8 48 0.0017 24.6 6.7 46 156-210 48-93 (150)
120 3qky_A Outer membrane assembly 48.5 1E+02 0.0035 24.6 12.6 64 15-79 152-224 (261)
121 1a17_A Serine/threonine protei 48.4 56 0.0019 23.5 6.8 47 155-210 29-75 (166)
122 2hr2_A Hypothetical protein; a 48.3 34 0.0012 27.3 5.8 72 156-239 74-154 (159)
123 1dd5_A Ribosome recycling fact 48.2 52 0.0018 27.1 7.0 69 45-118 103-175 (185)
124 1na0_A Designed protein CTPR3; 47.1 61 0.0021 21.6 6.7 46 156-210 26-71 (125)
125 2e2e_A Formate-dependent nitri 46.9 56 0.0019 24.3 6.7 46 156-210 98-143 (177)
126 1w3b_A UDP-N-acetylglucosamine 46.6 1.3E+02 0.0045 25.3 15.4 28 12-39 68-95 (388)
127 1ise_A Ribosome recycling fact 46.5 55 0.0019 27.0 6.9 69 45-118 103-175 (185)
128 2ho1_A Type 4 fimbrial biogene 46.1 1E+02 0.0035 23.9 16.5 62 11-77 71-132 (252)
129 1na0_A Designed protein CTPR3; 45.6 65 0.0022 21.5 6.7 46 156-210 60-105 (125)
130 2fbn_A 70 kDa peptidylprolyl i 45.5 58 0.002 24.9 6.8 46 156-210 105-150 (198)
131 1p5q_A FKBP52, FK506-binding p 45.5 21 0.00073 30.8 4.5 54 156-210 164-224 (336)
132 1ge9_A Ribosome recycling fact 45.1 76 0.0026 26.1 7.5 70 45-118 105-174 (184)
133 1hh8_A P67PHOX, NCF-2, neutrop 45.1 59 0.002 24.8 6.7 47 155-210 53-99 (213)
134 1qqe_A Vesicular transport pro 45.0 1.3E+02 0.0044 24.8 14.1 52 155-210 134-186 (292)
135 1is1_A Ribosome recycling fact 45.0 58 0.002 26.8 6.8 69 45-118 103-175 (185)
136 3ma5_A Tetratricopeptide repea 44.6 72 0.0025 21.7 10.8 59 11-74 7-65 (100)
137 2kat_A Uncharacterized protein 44.4 74 0.0025 21.8 12.0 60 11-75 19-78 (115)
138 1kt0_A FKBP51, 51 kDa FK506-bi 43.9 39 0.0013 30.7 6.2 53 156-210 285-345 (457)
139 1wqg_A Ribosome recycling fact 43.9 62 0.0021 26.6 6.8 68 45-117 103-174 (185)
140 1eh1_A Ribosome recycling fact 43.5 54 0.0019 27.0 6.4 73 45-118 104-176 (185)
141 3urz_A Uncharacterized protein 43.4 62 0.0021 25.3 6.8 29 11-39 4-32 (208)
142 2wh5_A Acyl-COA-binding domain 42.9 38 0.0013 25.3 4.9 48 25-74 10-73 (106)
143 3gw4_A Uncharacterized protein 42.4 1E+02 0.0035 22.9 15.4 57 155-214 123-179 (203)
144 3as5_A MAMA; tetratricopeptide 42.3 77 0.0026 22.8 6.7 47 156-211 93-139 (186)
145 1wao_1 Serine/threonine protei 41.6 52 0.0018 30.1 6.7 15 195-209 87-101 (477)
146 3u4t_A TPR repeat-containing p 41.4 1.3E+02 0.0043 23.6 12.5 49 155-212 158-209 (272)
147 2ond_A Cleavage stimulation fa 39.9 1.6E+02 0.0054 24.3 17.3 171 6-210 96-269 (308)
148 3cv0_A Peroxisome targeting si 39.4 1.5E+02 0.005 23.8 18.1 29 11-39 55-83 (327)
149 2r5s_A Uncharacterized protein 39.4 1E+02 0.0034 23.1 7.2 29 11-39 108-136 (176)
150 2c2l_A CHIP, carboxy terminus 38.4 51 0.0017 27.5 5.7 49 161-213 53-103 (281)
151 4ga2_A E3 SUMO-protein ligase 37.3 77 0.0026 23.4 6.1 27 13-39 33-59 (150)
152 3sz7_A HSC70 cochaperone (SGT) 37.3 1.2E+02 0.0041 22.2 11.7 27 13-39 13-39 (164)
153 1zu2_A Mitochondrial import re 37.2 66 0.0023 25.5 5.9 94 135-242 42-142 (158)
154 2v5f_A Prolyl 4-hydroxylase su 36.8 1.1E+02 0.0036 21.4 7.5 53 156-210 22-74 (104)
155 2vgx_A Chaperone SYCD; alterna 36.8 1E+02 0.0035 22.7 6.7 46 156-210 38-83 (148)
156 2h6f_A Protein farnesyltransfe 36.6 2.2E+02 0.0076 25.1 12.9 58 12-74 98-156 (382)
157 2ond_A Cleavage stimulation fa 36.3 60 0.0021 27.1 5.8 47 155-210 185-231 (308)
158 1hh8_A P67PHOX, NCF-2, neutrop 35.8 81 0.0028 24.0 6.2 55 155-210 87-149 (213)
159 2fo7_A Synthetic consensus TPR 34.0 1E+02 0.0036 20.5 6.2 46 156-210 52-97 (136)
160 1hxi_A PEX5, peroxisome target 33.8 1.3E+02 0.0043 21.3 6.8 47 155-210 33-79 (121)
161 2e2e_A Formate-dependent nitri 33.5 1.1E+02 0.0038 22.5 6.5 48 155-210 60-109 (177)
162 2yhc_A BAMD, UPF0169 lipoprote 32.9 1.4E+02 0.0049 23.3 7.4 49 156-210 21-69 (225)
163 1ya0_A SMG-7 transcript varian 31.4 1.2E+02 0.0042 28.4 7.6 69 134-214 157-235 (497)
164 4i17_A Hypothetical protein; T 31.1 1E+02 0.0035 23.8 6.1 47 155-210 58-104 (228)
165 1w3b_A UDP-N-acetylglucosamine 30.7 2.4E+02 0.0081 23.6 15.9 27 13-39 35-61 (388)
166 3qou_A Protein YBBN; thioredox 30.1 1.6E+02 0.0054 24.3 7.5 29 11-39 219-247 (287)
167 3q49_B STIP1 homology and U bo 29.8 1.4E+02 0.0047 20.6 9.4 12 157-168 61-72 (137)
168 3gyz_A Chaperone protein IPGC; 29.3 1.8E+02 0.0062 21.8 10.3 57 12-73 37-93 (151)
169 1xi4_A Clathrin heavy chain; a 28.6 6.1E+02 0.021 27.7 13.4 24 186-209 1284-1307(1630)
170 1p5q_A FKBP52, FK506-binding p 28.3 1.3E+02 0.0044 25.7 6.7 46 156-210 213-258 (336)
171 2l6j_A TPR repeat-containing p 28.3 1.1E+02 0.0038 20.2 5.2 63 12-79 5-67 (111)
172 3u64_A Protein TP_0956; tetrat 28.2 58 0.002 28.9 4.4 63 135-210 205-268 (301)
173 4gyw_A UDP-N-acetylglucosamine 27.0 1.1E+02 0.0039 29.9 6.7 47 155-210 93-139 (723)
174 2vsy_A XCC0866; transferase, g 26.3 3.6E+02 0.012 24.3 14.2 29 11-39 23-51 (568)
175 4h7y_A Dual specificity protei 26.2 84 0.0029 25.4 4.6 74 122-209 10-87 (161)
176 2kc7_A BFR218_protein; tetratr 26.0 1.2E+02 0.004 19.9 4.9 61 14-79 3-64 (99)
177 3ub0_A Non-structural protein 25.6 41 0.0014 27.9 2.7 37 155-211 19-55 (199)
178 2wb7_A PT26-6P; extra chromoso 25.5 2.1E+02 0.0071 27.3 7.8 53 143-197 436-489 (526)
179 2yhc_A BAMD, UPF0169 lipoprote 24.9 2.4E+02 0.0083 21.9 17.6 65 12-78 5-69 (225)
180 2g0u_A Type III secretion syst 24.8 40 0.0014 24.8 2.2 59 127-192 6-68 (92)
181 2xcb_A PCRH, regulatory protei 24.2 2E+02 0.0067 20.5 11.2 27 13-39 20-46 (142)
182 2kck_A TPR repeat; tetratricop 23.6 1.5E+02 0.0053 19.1 8.7 25 15-39 10-34 (112)
183 1na3_A Designed protein CTPR2; 23.5 1.4E+02 0.0049 18.7 6.9 62 12-78 10-71 (91)
184 2qsr_A Transcription-repair co 23.0 1.6E+02 0.0054 23.6 5.8 54 5-64 24-77 (173)
185 1hxi_A PEX5, peroxisome target 22.6 2E+02 0.007 20.1 8.7 59 12-75 18-76 (121)
186 2if4_A ATFKBP42; FKBP-like, al 22.5 1.3E+02 0.0044 25.8 5.6 49 156-210 196-258 (338)
187 3urz_A Uncharacterized protein 21.7 2.3E+02 0.008 21.8 6.6 58 17-79 60-117 (208)
188 3eab_A Spastin; spastin, MIT, 21.1 2.4E+02 0.0082 20.4 7.4 69 156-241 7-81 (89)
189 2c2l_A CHIP, carboxy terminus 20.8 1.2E+02 0.0042 25.0 5.0 28 12-39 5-32 (281)
190 3iyk_A VP5; icosahedral virus; 20.7 4.4E+02 0.015 25.0 8.9 196 25-236 121-337 (526)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=1.3e-97 Score=657.35 Aligned_cols=239 Identities=58% Similarity=0.920 Sum_probs=223.8
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 8 NLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 8 ~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
|.+|++++|+||||+||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++||++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~~-~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--LN-EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 45799999999999999999999999999998 66 9999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc--chHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025497 88 HVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATAS--ESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAA 165 (252)
Q Consensus 88 ~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 165 (252)
+++.+++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|++++++|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhccc
Q 025497 166 QDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDV 245 (252)
Q Consensus 166 ~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~~e~ 245 (252)
+++|+++||||||+|||||||||||||||+|+|++||.+||+|||+||+++|+|+|++|+|+|+||||||||||+|+++.
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~ 237 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ 237 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ccCC
Q 025497 246 QDQL 249 (252)
Q Consensus 246 ~~~~ 249 (252)
++++
T Consensus 238 ~~~~ 241 (248)
T 3uzd_A 238 QDDD 241 (248)
T ss_dssp ----
T ss_pred cccc
Confidence 7655
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.7e-97 Score=656.41 Aligned_cols=238 Identities=68% Similarity=1.033 Sum_probs=227.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhcc
Q 025497 4 TVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGR 83 (252)
Q Consensus 4 ~~~~~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~ 83 (252)
|++.|.+|++++|+|||||||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|+++|||++.+
T Consensus 24 ~~~~m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~~-~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~ 100 (261)
T 3ubw_A 24 AMGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENK 100 (261)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhcc
Confidence 566678899999999999999999999999999998 66 999999999999999999999999999999999999988
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHH
Q 025497 84 KNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYK 163 (252)
Q Consensus 84 ~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 163 (252)
|++.+++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|+
T Consensus 101 g~~~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~ 180 (261)
T 3ubw_A 101 GGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYK 180 (261)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhc
Q 025497 164 AAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 243 (252)
Q Consensus 164 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~~ 243 (252)
+|+++|+++||||||+|||||||||||||||+|+|++||++||+|||+||+++|+|+||+|+|||+||||||||||+|++
T Consensus 181 ~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts 260 (261)
T 3ubw_A 181 AASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 260 (261)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred c
Q 025497 244 D 244 (252)
Q Consensus 244 e 244 (252)
+
T Consensus 261 ~ 261 (261)
T 3ubw_A 261 D 261 (261)
T ss_dssp -
T ss_pred C
Confidence 4
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.7e-96 Score=646.58 Aligned_cols=230 Identities=59% Similarity=0.906 Sum_probs=226.4
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHH
Q 025497 10 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV 89 (252)
Q Consensus 10 ~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 89 (252)
+|++++|+|||||||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++||++.+|++.++
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~--~~-~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVE--KG-EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 699999999999999999999999999999 66 999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025497 90 SLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIA 169 (252)
Q Consensus 90 ~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 169 (252)
+.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025497 170 GADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 242 (252)
Q Consensus 170 ~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~ 242 (252)
+++||||||+||||+||||||||||+|+|++||++||+|||+|++++|+++||+|+|||+||||||||||+|+
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.7e-94 Score=633.46 Aligned_cols=233 Identities=69% Similarity=1.047 Sum_probs=226.3
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 8 NLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 8 ~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
|++|++++|+|||++|||||+||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~~-~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--cc-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 34699999999999999999999999999998 65 8999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025497 88 HVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQD 167 (252)
Q Consensus 88 ~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 167 (252)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhc
Q 025497 168 IAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 243 (252)
Q Consensus 168 ~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~~ 243 (252)
+|+++||||||+||||+||||||||||+|++++||++||+|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9998999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2e-94 Score=641.81 Aligned_cols=241 Identities=76% Similarity=1.136 Sum_probs=222.2
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 9 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTP-AAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 9 ~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~-~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
++|++++|+|||++|||||+||+++||++++ ++ +++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~--~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN--SLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--cCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 3599999999999999999999999999998 42 27999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025497 88 HVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQD 167 (252)
Q Consensus 88 ~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 167 (252)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhccccc
Q 025497 168 IAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 247 (252)
Q Consensus 168 ~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~~e~~~ 247 (252)
+|+++||||||+||||+||||||||||+|++++||.|||+|||+|++++|+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCCC
Q 025497 248 QLDE 251 (252)
Q Consensus 248 ~~~~ 251 (252)
++++
T Consensus 244 ~~~~ 247 (260)
T 1o9d_A 244 DGAD 247 (260)
T ss_dssp ----
T ss_pred cccc
Confidence 6543
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=5e-93 Score=632.35 Aligned_cols=232 Identities=63% Similarity=1.015 Sum_probs=224.6
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCC--CCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 10 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTP--AAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 10 ~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~--~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
+|++++|+|||++|||||+||+++||++++ .+ +++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~--~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE--ARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--SCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 599999999999999999999999999998 42 17999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025497 88 HVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQD 167 (252)
Q Consensus 88 ~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 167 (252)
+++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhhcc
Q 025497 168 IAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 244 (252)
Q Consensus 168 ~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~~e 244 (252)
+| ++||||||+||||+||||||||||+|++++||+|||+|||+|++++|+|+||+|+|+|+||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=3.7e-90 Score=613.68 Aligned_cols=227 Identities=21% Similarity=0.421 Sum_probs=196.6
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhh-hccCc-hh
Q 025497 10 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKE-EGRKN-EE 87 (252)
Q Consensus 10 ~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~ 87 (252)
+|++++|+|||+|||||||||+++| ++ ++ ++||.||||||||||||+||++|+|||+|++++||+ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~~-~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--SS-DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--cC-CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 66 65 999999999999999999999999999999999999 78887 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025497 88 HVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQD 167 (252)
Q Consensus 88 ~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 167 (252)
+++.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhccC--CCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025497 168 IAGADL--APTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWT 242 (252)
Q Consensus 168 ~a~~~L--~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~---ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~ 242 (252)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||+++|+|+|++ |+||||||||||+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWt 256 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWE 256 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhh
Confidence 999899 99999999999999999999999999999999999999 999999999987 999999999999999
Q ss_pred ccccc
Q 025497 243 SDVQD 247 (252)
Q Consensus 243 ~e~~~ 247 (252)
++.++
T Consensus 257 sd~~~ 261 (268)
T 3efz_A 257 QGCSG 261 (268)
T ss_dssp TTCCT
T ss_pred ccccc
Confidence 98765
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=9.7e-82 Score=548.88 Aligned_cols=217 Identities=23% Similarity=0.292 Sum_probs=197.9
Q ss_pred CHHHHH---HHHHHHHHhcCHHHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccC
Q 025497 10 TREQYV---YLAKLAEQAERYEEMVEFMQKLVVGS--TPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRK 84 (252)
Q Consensus 10 ~r~~l~---~~Aklaeq~ery~Dm~~~mk~~~~~~--~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~ 84 (252)
+|++++ |+|||++||||||||+++||++++.. ++ ++||.||||||||||||+||++|+|||+|+++|||+ +|
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~-~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~ 78 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN-SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LN 78 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CS
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cC
Confidence 589999 99999999999999999999999710 13 899999999999999999999999999999999998 67
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHH
Q 025497 85 NEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKA 164 (252)
Q Consensus 85 ~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 164 (252)
++.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|+++|++
T Consensus 79 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~ 150 (227)
T 2o8p_A 79 NDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQD 150 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHH
Confidence 88899999999999999999999999999999999997 999999999999999999999998 8999999999
Q ss_pred HHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCCCchHHHHHHHHHHHhhHh
Q 025497 165 AQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA---IAELDTLGEESYKDSTLIMQLLRDNLT 239 (252)
Q Consensus 165 A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a---i~~ld~l~ee~~~ds~~ilqlLrDNl~ 239 (252)
|+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-++. +.++++|+|+|+|||||.
T Consensus 151 A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 151 AFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 999999899999999999999999999999999999999999999966 3333322 358889999999999984
No 9
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.66 E-value=1.5 Score=35.96 Aligned_cols=187 Identities=18% Similarity=0.172 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhcc--C---CCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhh-hhc--c
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGS--T---PAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQK-EEG--R 83 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~--~---~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk-~~~--~ 83 (252)
.-+..++.+....|+|++++.+++++++.. . + ......-...+..+|-. .+....|...+...... ... .
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHD-HPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSS-SHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 556788999999999999999999988621 0 1 11222223334443322 23344444444321111 000 0
Q ss_pred Cchh----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHH
Q 025497 84 KNEE----HVSLVKEYR-SKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDT 158 (252)
Q Consensus 84 ~~~~----~~~~i~~yr-~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a 158 (252)
.... ...+..-|. ..=-++-...+...+.+.....-+. .......+-..|..|... ++ .+.|
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A 172 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEV 172 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHH
Confidence 0000 001111110 0011233344445554443322111 112222233344443222 11 3678
Q ss_pred HHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 159 MQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 159 ~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
...|++|+.++....++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 173 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 173 EYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999887888888888888888777766 69999999999999876543
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.50 E-value=1.5 Score=35.24 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
.+.|...|++|+.+++...++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 367899999999998888888899888888888877776 69999999999999876543
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.13 E-value=1.5 Score=33.70 Aligned_cols=163 Identities=15% Similarity=0.148 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSL 91 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 91 (252)
.-...++.+..+-|+|++++++.+++++ .+ |. +.+=...+..+|-. .+....+...+........... ......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~~-~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK--AD-PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTSA-EAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCH-HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchhH-HHHHHH
Confidence 3456789999999999999999999998 43 43 45555666666654 3444555555543332221110 001000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025497 92 VKEYRS-KVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAG 170 (252)
Q Consensus 92 i~~yr~-ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 170 (252)
..-+.. .-.++-...+...+. +-|.. ..+ +...|..|.-+ |+ -++|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~-----~~~~~----~~~--~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIA-----LNTVY----ADA--YYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCccc----hHH--HHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 010100 001111222222222 12321 111 22234443221 11 35689999999865
Q ss_pred ccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 171 ADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 171 ~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34444 33445555544 47999999988777764
No 12
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=93.99 E-value=2.5 Score=35.67 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
-++|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 3679999999999886 4666777777788899988887 79999999999999886643
No 13
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.74 E-value=0.77 Score=43.49 Aligned_cols=100 Identities=10% Similarity=0.072 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025497 101 KELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIR 180 (252)
Q Consensus 101 ~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 180 (252)
+|-..+|...+.+-...|=|... ...--+.--|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp---~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNL---YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 45566777777777666644431 111111222333322211 25689999999999999999999999
Q ss_pred HhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 181 LGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 181 LgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
+....|.++.|+. .|+.++|..+.++|++---.
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999999874443
No 14
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.27 E-value=0.69 Score=43.10 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025497 101 KELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIR 180 (252)
Q Consensus 101 ~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 180 (252)
+|...+|...+.+-.+.|=|...+ ..=-+.--|.-|+.. | --+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-----~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-----DWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-----CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455677777777777666554311 111111222222211 1 125689999999999999999999999
Q ss_pred HhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 181 LGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 181 LgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
.....|.+.-|+. .|+.++|..+-++|++--..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 8888888888776 79999999999988876544
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.65 E-value=0.34 Score=44.97 Aligned_cols=58 Identities=12% Similarity=0.065 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999988777 79999999999998875544
No 16
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.57 E-value=5.1 Score=35.44 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 209 (252)
++|.++|++|+++ .|.++..-.+.+++..+++..+|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999863 344445555677888888778899999988766654
No 17
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=91.06 E-value=1.1 Score=36.00 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|...|++|+.+.+...+|.||.......|.+..++. +|+.++|+...+++++..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56899999999999888888899888888888887775 799999999999998864
No 18
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.88 E-value=5.4 Score=32.13 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchH-hHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 157 DTMQSYKAAQDIAGADLAPTHPIRL-GLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 157 ~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.|...|++|+++....-.+. +-.+ ....+.+.+ |...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 47889999999885433322 2233 333444444 4558999999998777764
No 19
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.41 E-value=1.5 Score=40.84 Aligned_cols=58 Identities=5% Similarity=0.029 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
+.|...|++|+++.+..|.|.||-.+...-|-+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999888888777766 79999999999999875444
No 20
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.34 E-value=6.7 Score=32.27 Aligned_cols=46 Identities=9% Similarity=0.123 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 209 (252)
.+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 356889999998763 3333 23344444444 4799999988777654
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=89.75 E-value=8.3 Score=32.49 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
-.-+..++.+....|+|++++.+++++++ .+ |. +.+-...+..+|-. .+....|...+..
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCLE--LK-PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34566778888888888888888888876 32 33 44555555555543 3445555555543
No 22
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.59 E-value=1.8 Score=40.98 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
+.|...|++|+++.+..|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 35778899999999999999999999999998887776 79999999999999875444
No 23
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.41 E-value=3.1 Score=36.25 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=47.2
Q ss_pred hHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhh-hHHHHHHHHhCChHHHHHHH
Q 025497 127 SKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLAL-NFSVFYYEILNQSDKACSMA 205 (252)
Q Consensus 127 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~L-N~SVF~yei~~~~~~A~~ia 205 (252)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . + +|...+.++ +.+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 344555667776644322 35689999999998754 3 2 344444444 4455555 489999999999
Q ss_pred HHHHHHH
Q 025497 206 KQAFEEA 212 (252)
Q Consensus 206 k~afd~a 212 (252)
++|++-.
T Consensus 167 ~~al~~~ 173 (383)
T 3ulq_A 167 RQAYEIY 173 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887754
No 24
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.98 E-value=12 Score=33.35 Aligned_cols=49 Identities=10% Similarity=0.150 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46788888888765 34444 33455555544 4799999999888877644
No 25
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=87.54 E-value=13 Score=31.97 Aligned_cols=189 Identities=15% Similarity=0.065 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVE----ERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~e----ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
..+..++....+.|+|++++.+++++++ .. +. +.+ =...+..+|-. .+....+...+....+.....++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ--AG-TE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH--hc-cc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 4566788888999999999999999998 33 43 332 22334444432 3445555555442222111011110
Q ss_pred -HH----HHHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhc------c-cchhHHHH
Q 025497 88 -HV----SLVKEY-RSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEF------K-IGDERKAA 154 (252)
Q Consensus 88 -~~----~~i~~y-r~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~------~-~~~~~~~~ 154 (252)
.. .+..-| ...=-++-...+...+.+.... .+.......+...|..|...-.. . ...+-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 000101 1111133344455555554332 11222233333445555443320 0 01122334
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
.+.|...|++|++++... +.+|.......+.+..+ .-.|+.++|+...++++.-.-
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTY-YLLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHH
Confidence 678899999999888643 23344444444445444 457999999999888877544
No 26
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.50 E-value=0.71 Score=42.80 Aligned_cols=58 Identities=12% Similarity=0.004 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
+.|...|++|+++.+..|+|.||..+...-|-+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677788888877778999999999998888777665 79999999999998774433
No 27
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=87.48 E-value=10 Score=30.77 Aligned_cols=28 Identities=11% Similarity=0.279 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.-+..+|.+....|+|++++.++++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3456788889999999999999999886
No 28
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=87.07 E-value=9.8 Score=30.08 Aligned_cols=60 Identities=15% Similarity=0.020 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
+.+..++.+.-+.|+|+++++++.++++ .. +.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLK--LT-NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HT-TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh--cc-CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 6778899999999999999999999998 43 43444444445555543 4555666666653
No 29
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.19 E-value=2.1 Score=31.66 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
-+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 36799999999875 45554 345677777766 79999999998888764
No 30
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.16 E-value=20 Score=32.63 Aligned_cols=47 Identities=4% Similarity=0.098 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++++++. |.+| ....+.+.. |...|+.++|.+..+++++
T Consensus 532 ~~~A~~~~~~~~~~~-----p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLLS-----TNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHHS-----SCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 466888898888753 4454 233333333 4458999999988877765
No 31
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=85.98 E-value=16 Score=31.51 Aligned_cols=176 Identities=12% Similarity=0.043 Sum_probs=87.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCH-----HHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCc-hhHH
Q 025497 16 YLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTV-----EERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN-EEHV 89 (252)
Q Consensus 16 ~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~-----eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~ 89 (252)
+++.+.-..|+|++++.++++.+... ..... +=...+..+|-. .+..-.|...+.....--+..++ ....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKL---IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTG---GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH---hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 38888889999999999999988621 22221 222334444433 33333444433211111000111 0000
Q ss_pred HHH-----HHHH-HHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHH
Q 025497 90 SLV-----KEYR-SKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYK 163 (252)
Q Consensus 90 ~~i-----~~yr-~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 163 (252)
..+ .-|. ..=-++-...+...+.+.... .+.......+.-.|..|..+-. -+.|...|+
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~ 248 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFK 248 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHH
Confidence 000 0000 001122334444455444322 1122222223334555433211 367999999
Q ss_pred HHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 164 AAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 164 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
+|++++...-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 249 ~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 249 RAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99999865333 13334444555555554 7999999999998887653
No 32
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=85.55 E-value=4.9 Score=34.98 Aligned_cols=75 Identities=16% Similarity=0.174 Sum_probs=49.4
Q ss_pred chHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHH
Q 025497 126 ESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 205 (252)
Q Consensus 126 eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~ia 205 (252)
....+|+-.+|.++...-. -+.|...|++|..++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3444556667776644322 35689999999998853 32 334444445555665554 79999999999
Q ss_pred HHHHHHHH
Q 025497 206 KQAFEEAI 213 (252)
Q Consensus 206 k~afd~ai 213 (252)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887543
No 33
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=84.67 E-value=23 Score=32.23 Aligned_cols=174 Identities=15% Similarity=0.108 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhcCH-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHH
Q 025497 11 REQYVYLAKLAEQAERY-EEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV 89 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery-~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 89 (252)
-.-+..++++....|+| ++++.++++.++ .+ + -..+=...+..+|-.. +....|...+....+.... .....
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~--~~-p-~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~ 174 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVK--LE-P-ELVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQ 174 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHh--hC-C-CCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHH
Confidence 34566777777777888 888888888776 32 3 3455566666666443 4455555555432222211 11111
Q ss_pred HHHHHHHH----------HHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHH
Q 025497 90 SLVKEYRS----------KVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTM 159 (252)
Q Consensus 90 ~~i~~yr~----------ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 159 (252)
.+-.-|.. .=-++-...++..+.+ -|.. ..+ +-..|..|..+ -|..+. ...-.+.|.
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~-~~~~~~-~~g~~~~A~ 241 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSL-YFNTGQ-NPKISQQAL 241 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHH-HHHTTC-CHHHHHHHH
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHH-HHhhcc-ccchHHHHH
Confidence 11111111 1112334444455443 2321 222 22344444332 111222 112357799
Q ss_pred HHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 160 QSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 160 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 242 ~~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 242 SAYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 999999976 23222555666777777665 7999999988777764
No 34
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=84.39 E-value=18 Score=30.62 Aligned_cols=53 Identities=17% Similarity=0.076 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHh-HhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLG-LALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|...|++|+.++.. . +. |...+ ...|.+.. |..+|+.++|+...++|++-+
T Consensus 204 ~~A~~~~~~al~~~~~-~-~~-~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-F-GD-KAAERRAYSNLGNA-YIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-T-TC-HHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c-CC-cHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHH
Confidence 5688888888888754 2 22 22333 33344444 445799999988888877644
No 35
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=84.27 E-value=9.3 Score=27.29 Aligned_cols=55 Identities=16% Similarity=0.079 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
-+.|...|++|++++... + .+|.......+.+..+ .-.|+.++|+...++|+.-+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 356889999999988642 2 2233333444455444 45799999999888877654
No 36
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=83.16 E-value=22 Score=30.80 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+ .|.+| ....+.+..+ ...|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAY-LIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 35688888888765 34444 3334444444 357999999998888765
No 37
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=83.04 E-value=16 Score=29.11 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVS 74 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~ 74 (252)
-+..++.+..+.|+|++++..+.+++. .+ | =+.+=...+..+|-. .|....|...+.
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p-~~~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALK--EN-P-QDPEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT--TS-S-SCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 455666666677777777777777665 32 2 234444445544432 344444444443
No 38
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=82.82 E-value=24 Score=30.98 Aligned_cols=55 Identities=16% Similarity=0.082 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----cchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADL--APTH----PIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++++..-...+ .|.+ |-......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887433223 4444 5555555566665555 7999999998888765
No 39
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=82.53 E-value=18 Score=29.27 Aligned_cols=55 Identities=16% Similarity=-0.028 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
+.|...|++|++++... .+|...+.+++.-...|...|+.++|+...+++++.+-
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56888899998887642 23344444444444455567999999998888876543
No 40
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=81.90 E-value=25 Score=30.48 Aligned_cols=168 Identities=13% Similarity=0.108 Sum_probs=86.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHHHH
Q 025497 15 VYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKE 94 (252)
Q Consensus 15 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 94 (252)
..+|.+..+.|+|++++..+.++++ . .+-+..-...+..+|-. .+....|...+....+..... .........-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~--~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE--V--CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH--H--CTTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--h--CCCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3457778899999999999999987 3 23455556666666644 355566666665443332111 0111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhh--------ccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025497 95 YRS-KVEKELSDVCASILRLLEANLIPSATASESKVFYLKM--------KGDYHRYMAEFKIGDERKAAAEDTMQSYKAA 165 (252)
Q Consensus 95 yr~-ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 165 (252)
|.. .=-++-......++. +-|.. ......+..+ .|+.+. ..| -.+.|...|++|
T Consensus 221 ~~~~g~~~~A~~~~~~~~~-----~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLK-----LDQDH--KRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHH-----HCTTC--HHHHHHHHHHHHHHHHHHHHHHHH-----HHT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH-----hCCCh--HHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 111 011222223333332 12321 1111111000 022111 111 145688888888
Q ss_pred HHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 166 QDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 166 ~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.+ .|.+|....-++..-.-.|.-+|+.++|+...++++.
T Consensus 284 l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 763 4667655444444444445568999999999888864
No 41
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.74 E-value=18 Score=28.15 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
-.-+..+|.+..+.|+|++++.++++++. .. +. +..-...+..+|-. .+....|...+..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALE--LD-SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--cC-Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 34556777788888888888888888776 32 32 33444444444432 3444455555543
No 42
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.72 E-value=25 Score=29.70 Aligned_cols=189 Identities=13% Similarity=0.035 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVE----ERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~e----ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
..+..++...-..|+|++++.++++++. .. +. +.. =...+..+|-. .+....|...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-cc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 4567889999999999999999999997 33 33 222 22344444432 3444445444432111111011110
Q ss_pred H-H----HHHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhh-------ccc---chhH
Q 025497 88 H-V----SLVKEY-RSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAE-------FKI---GDER 151 (252)
Q Consensus 88 ~-~----~~i~~y-r~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE-------~~~---~~~~ 151 (252)
. . ....-| ...=-++-...+...+.+.... .+.......+-..|..|...-. -.. .++-
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 0 0 011111 0111233344555555554432 1112222223334444433322 100 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 152 KAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 152 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
....+.|...|++|+.++.. . +.+|.......|.+..++ .+|+.++|+...++|+.-+-
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 34467899999999998864 3 233444444455555554 47999999999888876543
No 43
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=80.57 E-value=19 Score=28.39 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSI 76 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~i 76 (252)
-+..+|.+..+.|+|++++.++++++. .. +. +.+-...+..+|.. .+..-.|...+...
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~a 97 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALE--ID-PS-SADAHAALAVVFQT-EMEPKLADEEYRKA 97 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHh--cC-CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 456788888899999999999999987 32 33 45555555555543 45555666665543
No 44
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.56 E-value=2.8 Score=31.76 Aligned_cols=54 Identities=15% Similarity=0.275 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhccC---CCC-------CcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADL---APT-------HPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L---~pt-------~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 568999999998864321 233 67777888888888776 7999999999888865
No 45
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=78.67 E-value=31 Score=29.67 Aligned_cols=53 Identities=9% Similarity=0.192 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
.+.|...|++|++++...- +|.......|.+..++ -+|+.++|+...++|+.-
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLC-KAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Confidence 4678999999999987543 3444344455555555 479999999988877664
No 46
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=78.60 E-value=25 Score=28.42 Aligned_cols=190 Identities=12% Similarity=-0.004 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHH----HHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEE----RNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE 87 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eE----RnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 87 (252)
..+...+....+.|+|++++.++++.++ .. +. +.+. ...+..+|-. .+....+...+....+.....++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--hC-cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 4677889999999999999999999987 33 33 3221 2233333332 3344444444432211111011111
Q ss_pred H-H----HHHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcc----------cchhH
Q 025497 88 H-V----SLVKEY-RSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFK----------IGDER 151 (252)
Q Consensus 88 ~-~----~~i~~y-r~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~----------~~~~~ 151 (252)
. . ....-| ...--++-...+...+.+.... .+....+..+...|..|...-... ...+-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 0 0 011111 1111233344455555544432 222333444455666665544411 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 152 KAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 152 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
....+.|...|++|+.++... +.+|.......+.+.. |.-.|+.++|+...++++..+-.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 334677889999999887642 2233333344444444 44579999999999988875543
No 47
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=78.53 E-value=29 Score=29.24 Aligned_cols=59 Identities=10% Similarity=0.038 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
..++.+|....+.|+|++++.++++++. .. |. +.+-...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL--QD-PG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-cC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4588999999999999999999999997 33 33 45556666666654 4556666666654
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=78.49 E-value=53 Score=32.24 Aligned_cols=174 Identities=14% Similarity=0.190 Sum_probs=88.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH-Hhhhhhcc
Q 025497 5 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS-IEQKEEGR 83 (252)
Q Consensus 5 ~~~~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~-ieqk~~~~ 83 (252)
.|+. -+-+..++.+..+.|+|++++.+.++.++ .+ |+. .+=.+-|..+|... |..-.|...+.. ++-+.. .
T Consensus 5 ~P~~--a~al~nLG~~~~~~G~~~eAi~~~~kAl~--l~-P~~-~~a~~nLg~~l~~~-g~~~eA~~~~~~Al~l~P~-~ 76 (723)
T 4gyw_A 5 CPTH--ADSLNNLANIKREQGNIEEAVRLYRKALE--VF-PEF-AAAHSNLASVLQQQ-GKLQEALMHYKEAIRISPT-F 76 (723)
T ss_dssp -CHH--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-SCC-HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTT-C
T ss_pred CCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCC-C
Confidence 3554 35677899999999999999999999998 44 553 44555566666542 444444444432 111110 0
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHH
Q 025497 84 KNEEHVSLVKEYRS-KVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSY 162 (252)
Q Consensus 84 ~~~~~~~~i~~yr~-ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 162 (252)
-.....+-.-|.. .=-++-...++..+.+ -|.. ..+++ ..|..|+-+ | -.++|..+|
T Consensus 77 -~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l-----~P~~----~~a~~--~Lg~~~~~~-----g-----~~~eAi~~~ 134 (723)
T 4gyw_A 77 -ADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----NPAF----ADAHS--NLASIHKDS-----G-----NIPEAIASY 134 (723)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HHHHH--HHHHHHHHT-----T-----CHHHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----HHHHH--HHHHHHHHc-----C-----CHHHHHHHH
Confidence 0111111111110 0011122222333322 2321 11211 223333221 1 145688999
Q ss_pred HHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhc
Q 025497 163 KAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELD 217 (252)
Q Consensus 163 ~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld 217 (252)
++|+++ .|.+|- ...|.+. .|..+|+.++|++..+++++-.-..++
T Consensus 135 ~~Al~l-----~P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~~ 180 (723)
T 4gyw_A 135 RTALKL-----KPDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQLE 180 (723)
T ss_dssp HHHHHH-----CSCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-----CCCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHHh
Confidence 999865 344442 2334433 344579999998888888776555443
No 49
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=78.31 E-value=10 Score=31.66 Aligned_cols=53 Identities=11% Similarity=-0.005 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhH-hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGL-ALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL-~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|...|++|+++.. +..++..... ..|.+++|++ +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 568999999998542 2233333343 4445555554 799999999999988644
No 50
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.24 E-value=6.7 Score=28.09 Aligned_cols=55 Identities=16% Similarity=0.002 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
+.|...|++|++++... .+|..++.+++.-...|-..|+.++|+...++|++-+-
T Consensus 26 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56888888988888642 23444444544444444457999999998888877553
No 51
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=77.86 E-value=6.7 Score=28.87 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|.++|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899998864 34443 445566666665 7999999988777764
No 52
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=77.86 E-value=36 Score=29.86 Aligned_cols=172 Identities=9% Similarity=-0.006 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSL 91 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 91 (252)
.-+..++.+....|+|++++.++++++. .. +. +.+-...+..+|- ..+....+...+....+...... ......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKE--LD-PE-NIFPYIQLACLAY-RENKFDDCETLFSEAKRKFPEAP-EVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH--TC-SS-CSHHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTCS-HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-hh-hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccCH-HHHHHH
Confidence 3456778888888888888888888876 33 43 2333333444332 23445555555544332221111 111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025497 92 VKEY-RSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAG 170 (252)
Q Consensus 92 i~~y-r~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 170 (252)
..-| +..-.++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 1111 1111122333333443322 222111111111222233321100 012 245688899998875
Q ss_pred ccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 171 ADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 171 ~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.|.+| ....+.+..+. -.|+.++|+...+++++
T Consensus 445 ---~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESAD 477 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 34443 23344444444 57999999988887765
No 53
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=77.38 E-value=41 Score=30.38 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
.+.|.+.|+++.++... . +.+|-....+++.-...|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987643 2 3455543333333344445589999999998888763
No 54
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=75.47 E-value=32 Score=28.19 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Q 025497 15 VYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIE 77 (252)
Q Consensus 15 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ie 77 (252)
..+|.+..+.|+|++++..+++++. .. +-+.+-...+..+|-. .+....|...+....
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~--~~--~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~ 181 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE--VC--VWDAELRELRAECFIK-EGEPRKAISDLKAAS 181 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH--HC--TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH--hC--CCchHHHHHHHHHHHH-CCCHHHHHHHHHHHH
Confidence 3447888899999999999999987 32 3355555666666544 355666666665433
No 55
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=74.81 E-value=7.2 Score=32.69 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
-+.|...|++|+++++. .+........+..|.+..|+. +|+.++|+...++|++-+
T Consensus 171 ~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 171 LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 35699999999998863 332222233566677776665 799999999999998765
No 56
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=74.24 E-value=28 Score=26.96 Aligned_cols=61 Identities=10% Similarity=-0.044 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIE 77 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ie 77 (252)
..+..+|...-+.|+|++++.++++++. .. +-+.+-...+..+|- ..+....|...+....
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~~--~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~ 84 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE--EN--KEDAIPYINFANLLS-SVNELERALAFYDKAL 84 (243)
T ss_dssp ------------------CCTTHHHHHT--TC--TTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH--hC--cccHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Confidence 4566788889999999999999999987 32 334555555555554 3455566666665433
No 57
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=74.15 E-value=34 Score=27.81 Aligned_cols=55 Identities=15% Similarity=-0.033 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC-cchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTH-PIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+....-.+.+ |-......+.+..++ .+|+.++|+...++++.
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALV 264 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 35689999999998754333222 222334445555554 47999999998888775
No 58
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=73.79 E-value=27 Score=26.54 Aligned_cols=166 Identities=11% Similarity=-0.035 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSL 91 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 91 (252)
.-+..++.+..+.|+|++++..++++++ .. +. +.+-...+..+|-. .+....|...+....+..... .......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK--SD-PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH--hC-cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHH
Confidence 4456788899999999999999999987 32 33 34555555555543 455556666655433222111 0111111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025497 92 VKEYRSK--VEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIA 169 (252)
Q Consensus 92 i~~yr~k--i~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 169 (252)
..-|... =-++-...++.++. .|. .+. ....+...|..|... |+ .+.|...|+++++..
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~------~~~--~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~~ 143 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALA------DPT--YPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAAQ 143 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHT------STT--CSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCcHHHHHHHHHHHHc------CcC--Ccc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHhC
Confidence 1111111 01122222222221 121 111 122223344444221 11 356788888887642
Q ss_pred hccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 170 GADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 170 ~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 144 -----~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 144 -----PQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp -----TTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred -----CCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 3333 23334444444 479999999888887653
No 59
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=73.76 E-value=42 Score=28.65 Aligned_cols=182 Identities=12% Similarity=0.008 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchh---
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVVGS--TPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEE--- 87 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~~~--~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~--- 87 (252)
-+..++.+....|+|++++.++++.++.. .+.......=...+..+|- ..+....|...+..........++..
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 35678888889999999999999887621 0101111112223333332 23444445444432211111011100
Q ss_pred --HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhccc
Q 025497 88 --HVSLVKEYRSK-V-----------------EKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKI 147 (252)
Q Consensus 88 --~~~~i~~yr~k-i-----------------~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~ 147 (252)
...+..-|... - -++-...+.+.+.+.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 11111111111 1 234444555555554332 1122233333444544433211
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 148 GDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 148 ~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
.+.|...|++|+.+.... .++...+.+++.-...|-..|+.++|+...+++++.+-
T Consensus 239 -------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 345788888888887541 12233333444333444557888888888887776544
No 60
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=73.72 E-value=38 Score=28.22 Aligned_cols=58 Identities=12% Similarity=-0.050 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVS 74 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~ 74 (252)
..+..++.+..+.|+|++++.+++++++ .. | -+.+-...+..+|.. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p-~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--QD-P-KHMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--SC-T-TCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 5678899999999999999999999998 43 3 345555666666543 344445555554
No 61
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=73.69 E-value=36 Score=27.90 Aligned_cols=61 Identities=11% Similarity=-0.001 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSI 76 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~i 76 (252)
-.-+..++.+..+.|+|++++..+++++. . .+-+.+-...+..+|-. .+....|...+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~--~--~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a 214 (359)
T 3ieg_A 154 AELRELRAECFIKEGEPRKAISDLKAASK--L--KSDNTEAFYKISTLYYQ-LGDHELSLSEVREC 214 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T--CSCCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHH--h--CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 35567889999999999999999999987 3 34456666666666654 45566666666543
No 62
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=72.92 E-value=41 Score=28.25 Aligned_cols=60 Identities=15% Similarity=0.237 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
-.-+..++.+..+.|+|++++.++++.++ .+ |. +.+-...+..+|.. .+....|...+..
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE--LQ-PN-NLKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 45677889999999999999999999997 43 33 44555566666643 3445555555543
No 63
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=72.57 E-value=37 Score=27.54 Aligned_cols=28 Identities=7% Similarity=-0.095 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
+.++.+|...-+.|+|++++.++++++.
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 49 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQ 49 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3455666666666666666666666665
No 64
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=72.39 E-value=42 Score=28.17 Aligned_cols=112 Identities=21% Similarity=0.276 Sum_probs=65.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHHHHH
Q 025497 16 YLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEY 95 (252)
Q Consensus 16 ~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 95 (252)
..|+|.+....|-.||+-+|.-.. +..|..|.=.-||=-+.. ++.+. +.++++..=+..
T Consensus 99 eiarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsK 157 (294)
T 3caz_A 99 EIARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQK 157 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHH
Confidence 468888888888888888865432 234555666666655442 33221 222333222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhc
Q 025497 96 RSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGA 171 (252)
Q Consensus 96 r~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 171 (252)
-.+-+.--..+|-|+|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 158 LssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 158 FKDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 33344455667777776554 4567888888886553 22344568888887754
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=71.55 E-value=12 Score=27.37 Aligned_cols=52 Identities=8% Similarity=0.035 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 209 (252)
+.|...|++|+++.. ..++.++.+-....|.+.. |.-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~-~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNA-FQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHH
Confidence 568999999999875 3444444433344445554 445899999998665554
No 66
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=71.40 E-value=13 Score=25.19 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 209 (252)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688999999875 34443 344566665554 799999988777665
No 67
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=71.36 E-value=12 Score=25.79 Aligned_cols=53 Identities=6% Similarity=0.031 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+.. ..++.++.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 568899999998874 3344544445566666666665 7999999887776665
No 68
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.16 E-value=13 Score=28.27 Aligned_cols=55 Identities=7% Similarity=0.042 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|...|++|+.+++ ..+ .+|...+.+++.-...|-.+|+.++|+...++|+.-+
T Consensus 83 ~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 568999999999986 333 2454455554444444455899999999999988754
No 69
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=71.15 E-value=19 Score=27.79 Aligned_cols=50 Identities=22% Similarity=0.159 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 025497 25 ERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVS 74 (252)
Q Consensus 25 ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~ 74 (252)
+|.|..++++|.-+..-..|++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887655311124999999999999999998888888888775
No 70
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=71.11 E-value=8.5 Score=33.97 Aligned_cols=54 Identities=11% Similarity=0.179 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhcc-CCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGAD-LAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~-L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 66999999999998653 344577776666788777766 7999999877666543
No 71
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=70.61 E-value=11 Score=21.65 Aligned_cols=27 Identities=22% Similarity=0.474 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025497 90 SLVKEYRSKVEKELSDVCASILRLLEA 116 (252)
Q Consensus 90 ~~i~~yr~ki~~EL~~~C~eil~lid~ 116 (252)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 567899999999999999998877643
No 72
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=70.50 E-value=40 Score=27.09 Aligned_cols=65 Identities=12% Similarity=0.069 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCC--CCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAE--LTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQK 79 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~--Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk 79 (252)
-+.+..+|...-+.|+|++++..+++++. .. |. +..+=...+..+|-. .+....|...+......
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~--~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFT--YG-RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGG--GC-SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 57788999999999999999999999997 32 33 225556666666644 46677777777665544
No 73
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=70.10 E-value=17 Score=23.59 Aligned_cols=47 Identities=21% Similarity=0.408 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 35688899999875 23343 344556655554 7999999988777765
No 74
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.59 E-value=54 Score=28.22 Aligned_cols=58 Identities=16% Similarity=-0.020 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
.++|...|++|..++.. .+ ..|.-.|...+...-+|...++..+|+..-.++|+..-.
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 35689999999998853 33 223344666666667777789999999988888876433
No 75
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=69.09 E-value=16 Score=25.84 Aligned_cols=47 Identities=13% Similarity=0.273 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688899999865 3444 3455666666665 79999999988888764
No 76
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=68.51 E-value=15 Score=31.31 Aligned_cols=55 Identities=13% Similarity=0.113 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....++++.
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 55888999999888754445556655555666766665 59999998888877654
No 77
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=68.19 E-value=43 Score=26.48 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 157 DTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 157 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.|...|++++..... ..|-.....++.+..++ .+|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYL-SLGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 455555555433211 11222344455555555 47999999987777653
No 78
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=67.61 E-value=25 Score=24.54 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888763 46776655555666666654 7999999987766654
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=67.50 E-value=20 Score=23.89 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+++. |.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 56888999988753 333 3345566666665 6999999887777664
No 80
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=67.41 E-value=66 Score=28.39 Aligned_cols=53 Identities=11% Similarity=0.108 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhc--cCCCCCcc---hHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 158 TMQSYKAAQDIAGA--DLAPTHPI---RLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 158 a~~aY~~A~~~a~~--~L~pt~pi---rLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 214 a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 214 ANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34445555544432 35566653 3455566655566678999999998888865
No 81
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=66.44 E-value=44 Score=25.96 Aligned_cols=28 Identities=11% Similarity=0.288 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.-+..++.+..+.|+|++++.++++.+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3456789999999999999999999987
No 82
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=65.84 E-value=25 Score=26.23 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+ .....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4566666666654 2333 2334444544444 6777777766665554
No 83
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.69 E-value=16 Score=25.99 Aligned_cols=49 Identities=27% Similarity=0.228 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+. +.|.++....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 446666666653 345554445555566655554 5777777777666654
No 84
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=65.27 E-value=24 Score=23.59 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5688888888764 3444420 45566666655 7999999887777664
No 85
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=64.45 E-value=63 Score=27.05 Aligned_cols=52 Identities=8% Similarity=-0.030 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~af 209 (252)
-+.|...|++|+.+.... +. ++ ..+.++.-....|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 356899999999988542 21 22 333333334445556799999988766654
No 86
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=63.80 E-value=30 Score=24.06 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++++.. .|.+|..-...++.+..++. .|+.++|+...++++.
T Consensus 19 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 4577788877653 46777655555666666665 7999999988887765
No 87
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=63.18 E-value=63 Score=26.65 Aligned_cols=189 Identities=16% Similarity=0.094 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-----HHhhhhhhHHHHHHHH-HhhhhhccCc
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAY-----KNVIGSLRAAWRIVSS-IEQKEEGRKN 85 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ay-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~ 85 (252)
+.+...+...-..|+|+++++.+++.++ .. +. ..+....+..-| -...+..-.|...+.. ++........
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELK--KE-EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhc--cc-cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 3445667777778999999999999887 32 33 443322222111 1112233345444432 2111111100
Q ss_pred hhHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHH
Q 025497 86 EEHV----SLVKEYR-SKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQ 160 (252)
Q Consensus 86 ~~~~----~~i~~yr-~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 160 (252)
.... .+..-|. ..=-++-....+..+.+.+. .|.. ....+..+-..|..|..+-+ -++|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~~--~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHDN--EEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCCC--HHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCcc--ccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 0000 1111111 11123445555666655543 2321 11111122234444432211 367999
Q ss_pred HHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHH-HHHHHHHHHHHHhhcccCCCchH
Q 025497 161 SYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKAC-SMAKQAFEEAIAELDTLGEESYK 225 (252)
Q Consensus 161 aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~-~iak~afd~ai~~ld~l~ee~~~ 225 (252)
.|++|++++.. ..++..++.+++.--..|.-+|+.++|+ ...++ |+.-.+.+++..++
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~----Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK----ASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH----HHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH----HHHHHHHhCcHhhH
Confidence 99999999853 2334456655555555566689999994 43444 44444455555553
No 88
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=61.04 E-value=56 Score=25.32 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.-+..+|.+..+.|+|+++++++.++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 39 TYLNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3456677777777888888888877776
No 89
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=60.98 E-value=28 Score=24.51 Aligned_cols=46 Identities=17% Similarity=0.134 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3466666666653 23332 333344444443 5666666666665544
No 90
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=60.41 E-value=61 Score=25.56 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKN 61 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn 61 (252)
-+-+..++.+..+.|+|++++..+++++. .+ |. +.+-...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~--~~-P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA--RT-PR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-cHHHHHHHHHHHHH
Confidence 45667899999999999999999999998 43 44 44555555555543
No 91
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=60.06 E-value=28 Score=25.33 Aligned_cols=47 Identities=6% Similarity=0.036 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+++ .|.++ ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688999999875 44443 334555555554 7999999876666554
No 92
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=59.94 E-value=30 Score=23.81 Aligned_cols=46 Identities=11% Similarity=0.105 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5678889888875 23333 34455555554 47999999988777665
No 93
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=59.22 E-value=34 Score=27.30 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHh-----HhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLG-----LALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-----L~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
-+.|..+|++|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+.-+.+|+.-
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 35699999999998753 3322333333 56666655554 79999999887777653
No 94
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=58.63 E-value=32 Score=24.23 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=8.5
Q ss_pred hCChHHHHHHHHHHHHH
Q 025497 195 LNQSDKACSMAKQAFEE 211 (252)
Q Consensus 195 ~~~~~~A~~iak~afd~ 211 (252)
+|+.++|+...++++..
T Consensus 90 ~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 90 MESYDEAIANLQRAYSL 106 (137)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 45555555554444443
No 95
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=58.16 E-value=35 Score=23.25 Aligned_cols=50 Identities=20% Similarity=0.383 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
.+.|...|++|+... |.+| ....+.+..++. .|+.++|+...++++...-
T Consensus 20 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKELD-----PTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-----CccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 356888899888753 3333 344555665555 7999999999888877553
No 96
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=57.23 E-value=14 Score=26.10 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 347788888875 334467667777777777776 79999999998888753
No 97
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=56.92 E-value=51 Score=23.89 Aligned_cols=48 Identities=23% Similarity=0.149 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999875 456653 33555555554 799999998877776544
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=56.74 E-value=36 Score=23.86 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688999999875 34443 334455555554 799999999888887654
No 99
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=56.21 E-value=32 Score=25.78 Aligned_cols=47 Identities=15% Similarity=0.216 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
-+.|..+|++|+++ .|.|| ....+.+..|+ -+|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~-~~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYM-DIGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 35688999999864 34554 23334444444 46888888887777654
No 100
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=56.20 E-value=44 Score=23.05 Aligned_cols=50 Identities=14% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
.+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++++...-
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 35688999999875 33443 233555555554 7999999998888776543
No 101
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=55.98 E-value=58 Score=23.99 Aligned_cols=46 Identities=9% Similarity=-0.060 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHh
Confidence 5688888888875 45554 334444554444 7999999887666654
No 102
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=54.46 E-value=37 Score=22.62 Aligned_cols=46 Identities=11% Similarity=0.053 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5678888888865 34443 34455555544 47999999887666543
No 103
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=54.35 E-value=59 Score=23.51 Aligned_cols=164 Identities=16% Similarity=0.151 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHH
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLV 92 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 92 (252)
-+..++.+..+.|+|++++..+++++. .. + -+..-...+..+|- ..+....|...+....+..... ........
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~-~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 83 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--AD-A-FDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDN-VKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--TT-S-CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--hC-c-cChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCC-HHHHHHHH
Confidence 345678888889999999999998876 32 3 23444444444443 2444555555554333221111 01111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhc
Q 025497 93 KEYRS-KVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGA 171 (252)
Q Consensus 93 ~~yr~-ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 171 (252)
.-|.. .=-++-....+.++.+ -|. ...++ ...|..|.- .|+ .+.|...|++++...
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~~~--~~~a~~~~~-----~~~-----~~~A~~~~~~~~~~~-- 140 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEA-----NPI----NFNVR--FRLGVALDN-----LGR-----FDEAIDSFKIALGLR-- 140 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----CTT----CHHHH--HHHHHHHHH-----TTC-----HHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CcH----hHHHH--HHHHHHHHH-----cCc-----HHHHHHHHHHHHhcC--
Confidence 11111 1112222233333322 121 12222 222333221 111 356788888887653
Q ss_pred cCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 172 DLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 172 ~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
|.+| ....+.+..++ -.|+.++|+...+++++..
T Consensus 141 ---~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 141 ---PNEG---KVHRAIAFSYE-QMGRHEEALPHFKKANELD 174 (186)
T ss_dssp ---TTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred ---ccch---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHcC
Confidence 3332 33344444444 4799999998888876543
No 104
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=54.21 E-value=35 Score=28.80 Aligned_cols=69 Identities=16% Similarity=0.096 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh----hhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ----KEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-.-|.|.|-+..-.. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999888888888852111 111011 01123344566666666666666666544
No 105
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=54.19 E-value=34 Score=28.56 Aligned_cols=53 Identities=13% Similarity=0.001 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5689999999998753 32 45555556665555666789999999988888764
No 106
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=54.09 E-value=35 Score=25.49 Aligned_cols=47 Identities=15% Similarity=0.047 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5689999999875 455553 34566666655 79999998766665543
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.79 E-value=46 Score=22.53 Aligned_cols=47 Identities=21% Similarity=0.148 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888865 34443 23345555444 479999999887776653
No 108
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=53.57 E-value=51 Score=22.56 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLL 234 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlL 234 (252)
.+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-.. ....-...+.++|
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l 87 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAK 87 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHH
Confidence 35688899999875 344432 3445555544 4799999999888888765432 1233345556666
Q ss_pred HhhHhhhh
Q 025497 235 RDNLTLWT 242 (252)
Q Consensus 235 rDNl~lW~ 242 (252)
+..=..|.
T Consensus 88 ~~~~~~~~ 95 (100)
T 3ma5_A 88 LKAEGLEH 95 (100)
T ss_dssp HHHHTTC-
T ss_pred HHcccccc
Confidence 65544443
No 109
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.51 E-value=27 Score=24.71 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.-+++++.++-+.|+|++++.+.+++++
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4556777777777777777777777776
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.41 E-value=47 Score=22.47 Aligned_cols=47 Identities=19% Similarity=0.173 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|...|++|+.. .|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYS-KLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHH-HhhchHHHHHHHHHHHhc
Confidence 5678888888865 23332 33445555554 479999999998888763
No 111
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=53.32 E-value=98 Score=25.79 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchH-hHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRL-GLALNFSVFYYEILNQSDKACSMAKQAFEEA 212 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yei~~~~~~A~~iak~afd~a 212 (252)
.+.|...|++|+++... . .++... ....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 36689999999998854 1 123233 344566666655 799999999888887654
No 112
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=52.04 E-value=45 Score=24.03 Aligned_cols=46 Identities=7% Similarity=-0.115 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888875 23333 334555555444 7999999988877765
No 113
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=52.02 E-value=49 Score=21.93 Aligned_cols=48 Identities=23% Similarity=0.250 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888764 34443 334455555554 79999999988887763
No 114
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.29 E-value=49 Score=23.26 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888865 34443 334555555554 7999999887776654
No 115
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=51.13 E-value=16 Score=32.42 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGAD--------LAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888888888865431 111466777788888887775 7999999998888865
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=50.49 E-value=51 Score=25.29 Aligned_cols=49 Identities=22% Similarity=0.324 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc-------------chHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHP-------------IRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~p-------------irLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45778888887654 2333 113455666666664 7999999988888765
No 117
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=50.44 E-value=76 Score=24.93 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35678888888765 33333 233344444444 7999999888888775
No 118
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.86 E-value=34 Score=26.22 Aligned_cols=47 Identities=11% Similarity=0.036 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999875 455553 34566665554 8999999886666554
No 119
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=49.84 E-value=48 Score=24.61 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
++|...|++|+++ .|.|| ....+.+..|+ -+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5688888888864 34554 23334444444 47999998887777665
No 120
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=48.49 E-value=1e+02 Score=24.56 Aligned_cols=64 Identities=19% Similarity=0.089 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHh---------hhhhhHHHHHHHHHhhh
Q 025497 15 VYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNV---------IGSLRAAWRIVSSIEQK 79 (252)
Q Consensus 15 ~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~---------i~~~R~s~R~l~~ieqk 79 (252)
..+|.+..+.|+|++++..+++++... .+.....+-...+..+|.+. .+....|...+..+...
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 688999999999999999999999732 11334566677777788755 25556666666554443
No 121
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=48.35 E-value=56 Score=23.47 Aligned_cols=47 Identities=23% Similarity=0.214 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+. |.+ ..+..+.+..++. +|+.++|+...++++.
T Consensus 29 ~~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 29 YENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 356888999988753 233 3344555555554 7999999998888776
No 122
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=48.33 E-value=34 Score=27.31 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHh--ccCCCCCc-------chHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCCchHH
Q 025497 156 EDTMQSYKAAQDIAG--ADLAPTHP-------IRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKD 226 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~--~~L~pt~p-------irLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~~ld~l~ee~~~d 226 (252)
+.|..+|.+|+++-. -++.|.++ .++|.+|. -+|+.++|+.--++|+.-. .-+-..+++
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-------~lgr~eEAl~~y~kAlel~-----p~d~~~~~~ 141 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-------GLGRGAEAMPEFKKVVEMI-----EERKGETPG 141 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHH-----HHCCSCCTT
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-------HCCCHHHHHHHHHHHHhcC-----CCcHHHHHH
Confidence 458888999988721 24566655 34455544 4899999987655554432 223344566
Q ss_pred HHHHHHHHHhhHh
Q 025497 227 STLIMQLLRDNLT 239 (252)
Q Consensus 227 s~~ilqlLrDNl~ 239 (252)
...+.+.+.+.+.
T Consensus 142 ~~~~~~~~~~~~~ 154 (159)
T 2hr2_A 142 KERMMEVAIDRIA 154 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655443
No 123
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=48.24 E-value=52 Score=27.10 Aligned_cols=69 Identities=13% Similarity=0.186 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh----hhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ----KEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-..|.|.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999888889888842111 111001 01233444566666666666666665543
No 124
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=47.07 E-value=61 Score=21.60 Aligned_cols=46 Identities=22% Similarity=0.432 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+... |.++ ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALELD-----PNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-----cCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 44666666666531 2222 223333433333 5777777766666554
No 125
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=46.88 E-value=56 Score=24.31 Aligned_cols=46 Identities=7% Similarity=0.018 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 5578889988865 34443 445566666555 6999999887776654
No 126
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=46.56 E-value=1.3e+02 Score=25.31 Aligned_cols=28 Identities=18% Similarity=0.339 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
+-+..++.+..+.|+|++++.++++++.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455666666777777777777777665
No 127
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=46.49 E-value=55 Score=26.97 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh----hhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ----KEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-.-|.+.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888842111 111011 01133344555666666666666565543
No 128
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=46.14 E-value=1e+02 Score=23.93 Aligned_cols=62 Identities=10% Similarity=-0.029 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIE 77 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ie 77 (252)
..-+..+|.+..+.|+|+++++++++++. .. +. +..-...+..+|-. .+....|.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA--SD-SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HC-cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 34567889999999999999999999987 33 33 44555555555543 455566666665443
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=45.60 E-value=65 Score=21.47 Aligned_cols=46 Identities=22% Similarity=0.432 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|+++..+ .|.+| ....+.+..++. .|+.++|....++++.
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5578888888764 23333 334455655554 7999999888777664
No 130
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=45.50 E-value=58 Score=24.94 Aligned_cols=46 Identities=9% Similarity=-0.015 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.++ ...++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688889998875 33333 344555655554 7999999887777654
No 131
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=45.48 E-value=21 Score=30.85 Aligned_cols=54 Identities=19% Similarity=0.257 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhccC-------CCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADL-------APTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 456777777776542110 00123445566666665555 5777777776666644
No 132
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=45.11 E-value=76 Score=26.05 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-.-|.|.|.+..--.+.-.+. . ++-++-.++.++++..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999888999988852111110010 0 01234445566666666666666666544
No 133
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=45.07 E-value=59 Score=24.76 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+. |.+| ....|.+..++. +|+.++|+...++++.
T Consensus 53 ~~~A~~~~~~al~~~-----~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 53 MTEAEKAFTRSINRD-----KHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----ccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 356889999998752 3443 445566666655 7999999998888776
No 134
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=45.05 E-value=1.3e+02 Score=24.79 Aligned_cols=52 Identities=10% Similarity=0.001 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchH-hHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRL-GLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|..+|++|+++.... .++... ....|.+.++.. +|+.++|+...+++.+
T Consensus 134 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 367899999999987531 122222 234556666665 7999999987776654
No 135
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=44.96 E-value=58 Score=26.80 Aligned_cols=69 Identities=17% Similarity=0.155 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh----hhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ----KEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-..|.+.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888888888842111 111111 01133344555666666666666665543
No 136
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=44.61 E-value=72 Score=21.72 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVS 74 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~ 74 (252)
-.-+..+|.+..+.|+|++++.+++++++ .+ |... .=...+..+|.. .+..-.|...+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~~~-~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE--TD-PDYV-GTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HS-TTCT-HHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCcH-HHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567899999999999999999999998 44 5533 345566666644 344444444443
No 137
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=44.44 E-value=74 Score=21.81 Aligned_cols=60 Identities=12% Similarity=0.062 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
-.-+..+|.+..+.|+|++++.++++++. .+ +. ..+-...+..+|.. .+....|...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD--FD-PT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 45667889999999999999999999998 43 43 35555666766655 4555566655543
No 138
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=43.87 E-value=39 Score=30.66 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHhccCC--------CCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLA--------PTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~--------pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+.... + ..+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 56888999998765321 1 0234667788888888776 7999999998888755
No 139
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=43.86 E-value=62 Score=26.63 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHh----hhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIE----QKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEAN 117 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~ 117 (252)
|+||.|-|.=|..-.|...-..|.+.|.+..-- .+.+..+ .+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999888888888874211 1111111 0112333455556666665555555544
No 140
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=43.49 E-value=54 Score=26.98 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025497 45 AELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANL 118 (252)
Q Consensus 45 ~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lid~~L 118 (252)
|+||.|-|.=|....|...-.-|.+.|.+..--.+.- ++......+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999888888888852111100 000000001234444566666666666666666543
No 141
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=43.42 E-value=62 Score=25.29 Aligned_cols=29 Identities=10% Similarity=0.205 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-+.++..+...-+.|+|++++.++.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46778889999999999999999999987
No 142
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=42.87 E-value=38 Score=25.35 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhh----------------hhHHHHHHH
Q 025497 25 ERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGS----------------LRAAWRIVS 74 (252)
Q Consensus 25 ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~----------------~R~s~R~l~ 74 (252)
++|+.+++.++.+-. .+...++.+++-.|-.-||..... +..||..+.
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~ 73 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLG 73 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhc
Confidence 568889999988653 222368999999999999987532 567787764
No 143
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=42.36 E-value=1e+02 Score=22.89 Aligned_cols=57 Identities=11% Similarity=-0.105 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIA 214 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai~ 214 (252)
.+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-.
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 35689999999998753 2 244555555555555555689999999988887776543
No 144
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=42.32 E-value=77 Score=22.82 Aligned_cols=47 Identities=15% Similarity=0.094 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
+.|.+.|+++... .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 5678888888765 23333 33455555554 479999999998888764
No 145
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=41.63 E-value=52 Score=30.11 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=6.8
Q ss_pred hCChHHHHHHHHHHH
Q 025497 195 LNQSDKACSMAKQAF 209 (252)
Q Consensus 195 ~~~~~~A~~iak~af 209 (252)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 355555444444433
No 146
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=41.41 E-value=1.3e+02 Score=23.64 Aligned_cols=49 Identities=10% Similarity=-0.098 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQ---SDKACSMAKQAFEEA 212 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~---~~~A~~iak~afd~a 212 (252)
.+.|...|++|+++. |.++ ...++.+..++ .+++ .++|+...+++++..
T Consensus 158 ~~~A~~~~~~a~~~~-----p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 158 YVKADSSFVKVLELK-----PNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHHS-----TTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----ccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 456788888887643 3442 22223333333 3466 666777666665543
No 147
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=39.89 E-value=1.6e+02 Score=24.33 Aligned_cols=171 Identities=14% Similarity=0.133 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH-HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhccC
Q 025497 6 PDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVE-ERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRK 84 (252)
Q Consensus 6 ~~~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~e-ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~ 84 (252)
|+. ..-...+|.+..+.|+++++.....+++. .. |. +.+ -...+...+.. .+..-.|..++....+.....
T Consensus 96 p~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~--~~-p~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~p~~- 167 (308)
T 2ond_A 96 KKN--MLLYFAYADYEESRMKYEKVHSIYNRLLA--IE-DI-DPTLVYIQYMKFARR-AEGIKSGRMIFKKAREDARTR- 167 (308)
T ss_dssp TTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHT--SS-SS-CTHHHHHHHHHHHHH-HHCHHHHHHHHHHHHTSTTCC-
T ss_pred ccc--HHHHHHHHHHHHhcCCHHHHHHHHHHHHh--cc-cc-CccHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCCC-
Confidence 544 34566889999999999999999999997 43 32 222 22222322221 233333333333221111100
Q ss_pred chhHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHH
Q 025497 85 NEEHVSLV-KEYR-SKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSY 162 (252)
Q Consensus 85 ~~~~~~~i-~~yr-~ki~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 162 (252)
........ ..++ ..=.++-..+....+.+ -|. ..-++ ...|+++ ...|+ .+.|...|
T Consensus 168 ~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~-----~p~-----~~~~~-~~~~~~~-----~~~g~-----~~~A~~~~ 226 (308)
T 2ond_A 168 HHVYVTAALMEYYCSKDKSVAFKIFELGLKK-----YGD-----IPEYV-LAYIDYL-----SHLNE-----DNNTRVLF 226 (308)
T ss_dssp THHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-----HTT-----CHHHH-HHHHHHH-----HTTCC-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC-----cHHHH-HHHHHHH-----HHCCC-----HHHHHHHH
Confidence 00011000 0000 00011222333333332 132 11222 2233332 12222 46789999
Q ss_pred HHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 163 KAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 163 ~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.+++.+
T Consensus 227 ~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 227 ERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9997631 3565433 3456777777766 6999999877666554
No 148
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=39.44 E-value=1.5e+02 Score=23.78 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-.-+..++.+..+.|+|++++.+++++++
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 83 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARM 83 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45567889999999999999999999987
No 149
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=39.36 E-value=1e+02 Score=23.09 Aligned_cols=29 Identities=28% Similarity=0.201 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-+-+..++.+..+.|+|++++.++.+++.
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 136 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILK 136 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 35566778888888888888888888876
No 150
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=38.42 E-value=51 Score=27.45 Aligned_cols=49 Identities=12% Similarity=0.024 Sum_probs=27.8
Q ss_pred HHHHHHHHHhc--cCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025497 161 SYKAAQDIAGA--DLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAI 213 (252)
Q Consensus 161 aY~~A~~~a~~--~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ai 213 (252)
-|++|...... .+.|.++ ....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 34555555443 3444443 34445554444 47888888888777776543
No 151
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=37.33 E-value=77 Score=23.42 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-...+|++..+.|+|++++++++++++
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346789999999999999999999998
No 152
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=37.30 E-value=1.2e+02 Score=22.20 Aligned_cols=27 Identities=7% Similarity=0.170 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.+..++.+..+.|+|++++.++.+.+.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344455555555555555555555554
No 153
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=37.18 E-value=66 Score=25.54 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=54.5
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCc---chHhHhhhHHHHH----HHHhCChHHHHHHHHH
Q 025497 135 KGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHP---IRLGLALNFSVFY----YEILNQSDKACSMAKQ 207 (252)
Q Consensus 135 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yei~~~~~~A~~iak~ 207 (252)
.|.-+.=+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 3445544566666666667789999999999875 44554 3455555322121 111245666665
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHHHHHhhHhhhh
Q 025497 208 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 242 (252)
Q Consensus 208 afd~ai~~ld~l~ee~~~ds~~ilqlLrDNl~lW~ 242 (252)
+|+.|++. +. .+.+...-+++..++-.+|.
T Consensus 113 ~~~kAl~l----~P-~~~~y~~al~~~~ka~el~~ 142 (158)
T 1zu2_A 113 FFQQAVDE----QP-DNTHYLKSLEMTAKAPQLHA 142 (158)
T ss_dssp HHHHHHHH----CT-TCHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHh----CC-CCHHHHHHHHHHHhCHhccC
Confidence 56666552 22 13445566666777777775
No 154
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=36.78 E-value=1.1e+02 Score=21.37 Aligned_cols=53 Identities=17% Similarity=0.036 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
..|..-|+.|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 4577788888876642211 11233344455555555 58999999998888765
No 155
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=36.75 E-value=1e+02 Score=22.74 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+ .|.+|.- ..+.+..++ -+|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~~-----~p~~~~~---~~~lg~~~~-~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCVL-----DHYDSRF---FLGLGACRQ-AMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CcccHHH---HHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence 4577888887753 4555532 345555555 47999999998888765
No 156
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=36.65 E-value=2.2e+02 Score=25.09 Aligned_cols=58 Identities=16% Similarity=0.258 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhh-hhHHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGS-LRAAWRIVS 74 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~-~R~s~R~l~ 74 (252)
+-+.+++.+..+.|+|++++....+++. .+ |. +.+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~--l~-P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIE--LN-AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHH--hC-cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 4566888888899999999999999998 43 44 344455555555443 32 455555554
No 157
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=36.35 E-value=60 Score=27.07 Aligned_cols=47 Identities=6% Similarity=0.112 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+. |.+ ..+-++++.|+.. .|+.++|+.+-.+|+.
T Consensus 185 ~~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 185 KSVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 356888999998753 333 4566888888765 6999998877666654
No 158
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=35.81 E-value=81 Score=23.96 Aligned_cols=55 Identities=13% Similarity=0.022 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhccC--------CCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADL--------APTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+.
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3568889999987542110 00334444566677776665 7999999887666543
No 159
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=34.02 E-value=1e+02 Score=20.50 Aligned_cols=46 Identities=22% Similarity=0.393 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|+++.... |.+| ....+.+..++ -.|+.++|+...++++.
T Consensus 52 ~~A~~~~~~~~~~~-----~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALELD-----PRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-----CCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 45777787777542 3332 22334444433 46888888888777665
No 160
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=33.79 E-value=1.3e+02 Score=21.35 Aligned_cols=47 Identities=11% Similarity=0.025 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+.+ .|.|| ..-.+.+..+.. +|+.++|+...++|+.
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35678888888764 34443 233444444443 7999998887666654
No 161
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=33.55 E-value=1.1e+02 Score=22.53 Aligned_cols=48 Identities=15% Similarity=0.257 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCCh--HHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQS--DKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~--~~A~~iak~afd 210 (252)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...++++.
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 356899999998764 3443 34456666655557887 999888777765
No 162
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=32.90 E-value=1.4e+02 Score=23.30 Aligned_cols=49 Identities=14% Similarity=0.174 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++++. ..|.+|..-...++.+..|+ -.|+.++|+...++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 557788888775 34566654444455554444 47999999987777654
No 163
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=31.36 E-value=1.2e+02 Score=28.43 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=39.6
Q ss_pred hccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHhHhhhH------HHHHHHH----hCChHHHHH
Q 025497 134 MKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNF------SVFYYEI----LNQSDKACS 203 (252)
Q Consensus 134 mkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~------SVF~yei----~~~~~~A~~ 203 (252)
--||..||...+ ..|...|.+|..+.=..= ..--.||+.-.+ +||||-- ..-...|..
T Consensus 157 ~LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G--~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~ 224 (497)
T 1ya0_A 157 HLGDIARYRNQT----------SQAESYYRHAAQLVPSNG--QPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAAST 224 (497)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHCTTBS--HHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHH
T ss_pred HcccHHHHHHHH----------HHHHHHHHHHHHhCCCCC--chHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHH
Confidence 379999998763 578999999987642111 112466655544 6776641 112334444
Q ss_pred HHHHHHHHHHH
Q 025497 204 MAKQAFEEAIA 214 (252)
Q Consensus 204 iak~afd~ai~ 214 (252)
=....|+.+.+
T Consensus 225 nL~~~f~~~~~ 235 (497)
T 1ya0_A 225 NLQKALSKALE 235 (497)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 44445555443
No 164
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=31.12 E-value=1e+02 Score=23.81 Aligned_cols=47 Identities=6% Similarity=0.083 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|...|++|+. +.|. ......+.+..|+. +|+.++|+...++++.
T Consensus 58 ~~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 58 YKEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 3568888998884 3333 34445556655554 7999999998887765
No 165
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=30.73 E-value=2.4e+02 Score=23.63 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-+..++.+.-+.|++++...+.+..+.
T Consensus 35 ~~~~l~~~~~~~~~~~~a~~~~~~a~~ 61 (388)
T 1w3b_A 35 VLLLLSSIHFQCRRLDRSAHFSTLAIK 61 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 444556666666666666666666655
No 166
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=30.13 E-value=1.6e+02 Score=24.33 Aligned_cols=29 Identities=24% Similarity=0.140 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-+-...+|.+..+.|||++++..+.+++.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 45667788888888888888888888887
No 167
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=29.78 E-value=1.4e+02 Score=20.62 Aligned_cols=12 Identities=8% Similarity=0.349 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHH
Q 025497 157 DTMQSYKAAQDI 168 (252)
Q Consensus 157 ~a~~aY~~A~~~ 168 (252)
.|...|++|+.+
T Consensus 61 ~A~~~~~~al~~ 72 (137)
T 3q49_B 61 QALADCRRALEL 72 (137)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 355666666543
No 168
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=29.25 E-value=1.8e+02 Score=21.84 Aligned_cols=57 Identities=18% Similarity=0.069 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIV 73 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l 73 (252)
+-+..++....+.|+|++++.++++++. .+ +-+.+=...+..+|-. .+....|...+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~--~~--P~~~~~~~~lg~~~~~-~g~~~~Ai~~~ 93 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCI--YD--FYNVDYIMGLAAIYQI-KEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC--TTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC--CCCHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 4455667777777777777777777776 32 3345555555555542 33444444433
No 169
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=28.58 E-value=6.1e+02 Score=27.70 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=20.5
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHH
Q 025497 186 NFSVFYYEILNQSDKACSMAKQAF 209 (252)
Q Consensus 186 N~SVF~yei~~~~~~A~~iak~af 209 (252)
.-.+-+|+-.|..++||.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355778899999999999999983
No 170
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=28.34 E-value=1.3e+02 Score=25.72 Aligned_cols=46 Identities=9% Similarity=0.030 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|..+|++|+++ .|.++ ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4577777777764 23333 233444444443 6777777776666654
No 171
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=28.27 E-value=1.1e+02 Score=20.16 Aligned_cols=63 Identities=13% Similarity=0.068 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQK 79 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk 79 (252)
+.+..++...-..|+|++++...++.+. .. | -+.+=...+..+|-. .+....|...+......
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~-p-~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLIT--AQ-P-QNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh--cC-C-CCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 4567788888889999999999999987 33 3 356667777777754 46677777777654443
No 172
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=28.22 E-value=58 Score=28.91 Aligned_cols=63 Identities=10% Similarity=0.025 Sum_probs=43.2
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcch-HhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 135 KGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIR-LGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 135 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
-|-+|-.+-++.-|+ .++|.+.|++|+++. |-. +..-.-|+-|+..-.++.+.|....++|+.
T Consensus 205 LG~lY~~vPp~~gGd-----~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 205 LTKFYAAAPESFGGG-----MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHSCTTTTCC-----HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCCC-----HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 344443334444454 367999999999875 433 566677788887777999998887777765
No 173
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=27.00 E-value=1.1e+02 Score=29.86 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35689999999875 3444 3445566666665 7999999998888875
No 174
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=26.33 E-value=3.6e+02 Score=24.35 Aligned_cols=29 Identities=10% Similarity=-0.074 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 11 REQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 11 r~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
-+-+..+|.+..+.|+|+++++++++.++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 51 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLA 51 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35567888999999999999999999987
No 175
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=26.18 E-value=84 Score=25.36 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=48.1
Q ss_pred CCCcchHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCC----cchHhHhhhHHHHHHHHhCC
Q 025497 122 ATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTH----PIRLGLALNFSVFYYEILNQ 197 (252)
Q Consensus 122 ~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~----pirLgL~LN~SVF~yei~~~ 197 (252)
+.++++-.-|+++--.. =.+..+ ...++-.+.|++|.. .+||+. .-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 44577777777752111 001112 466778899998875 466653 3445688999998 455 99
Q ss_pred hHHHHHHHHHHH
Q 025497 198 SDKACSMAKQAF 209 (252)
Q Consensus 198 ~~~A~~iak~af 209 (252)
+++|.++=+.|.
T Consensus 76 ~d~aR~vy~~a~ 87 (161)
T 4h7y_A 76 PDDARDYFQMAR 87 (161)
T ss_dssp GGGCHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888877774
No 176
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=26.00 E-value=1.2e+02 Score=19.92 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHH-HHHHHHHHHHHhhhhhhHHHHHHHHHhhh
Q 025497 14 YVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVE-ERNLLSVAYKNVIGSLRAAWRIVSSIEQK 79 (252)
Q Consensus 14 l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~e-ERnLls~ayKn~i~~~R~s~R~l~~ieqk 79 (252)
.+.+|...-+.|+|++++..++++++ .+ +. +.. =...+..+|.. .+....|...+......
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~--~~-p~-~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ--TE-PV-GKDEAYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH--HC-SS-THHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 35678888889999999999999987 33 33 455 67777777765 46677777777654444
No 177
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=25.56 E-value=41 Score=27.94 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 025497 155 AEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEE 211 (252)
Q Consensus 155 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 211 (252)
-+.|.++|++|..-. ..|. +++...+|+.|||.+||.
T Consensus 19 YE~A~~~Ye~a~~ng------~~pQ--------------~~Kql~KA~NIAKse~dr 55 (199)
T 3ub0_A 19 YEKARADLEEAKKND------VSPQ--------------LLKQLTKACNIAKSEFER 55 (199)
T ss_dssp HHHHHHHHHHHHHTT------CCHH--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC------CCHH--------------HHHHHHHHHHHHHHHHhH
Confidence 467888999885422 2221 356778999999999984
No 178
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.45 E-value=2.1e+02 Score=27.30 Aligned_cols=53 Identities=19% Similarity=0.019 Sum_probs=35.1
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCC-cchHhHhhhHHHHHHHHhCC
Q 025497 143 AEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTH-PIRLGLALNFSVFYYEILNQ 197 (252)
Q Consensus 143 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yei~~~ 197 (252)
||....+.-.+++++|.++|++|++..++ +..|+ |--.-..||- +-.||.-||
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aGD 489 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAGD 489 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhccH
Confidence 66667777788999999999999999864 55444 4333333333 344665444
No 179
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=24.95 E-value=2.4e+02 Score=21.86 Aligned_cols=65 Identities=14% Similarity=0.082 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ 78 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq 78 (252)
+.+..+|...-+.|+|++++..+++++... ...+...+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 456678888889999999999999998722 1122334445555555533 4556666666655443
No 180
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=24.79 E-value=40 Score=24.76 Aligned_cols=59 Identities=12% Similarity=0.263 Sum_probs=37.2
Q ss_pred hHhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHh----HhhhHHHHHH
Q 025497 127 SKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLG----LALNFSVFYY 192 (252)
Q Consensus 127 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~y 192 (252)
+.+|+ .|+-.-||-.+...-+ .-+..+.+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 6 ~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 6 TPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45565 4555557766554322 12445666777777543 36899999998 6667777643
No 181
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=24.24 E-value=2e+02 Score=20.52 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 13 QYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 13 ~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
.+..+|....+.|+|++++.++++++.
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 344455555555666666666665554
No 182
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=23.61 E-value=1.5e+02 Score=19.07 Aligned_cols=25 Identities=20% Similarity=0.314 Sum_probs=14.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 15 VYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 15 ~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
..+|.+..+.|+|++++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4455555555666666666655554
No 183
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=23.49 E-value=1.4e+02 Score=18.71 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ 78 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieq 78 (252)
.-+..+|.+..+.|+|++++.++++.+. .. +. +.+-...+..+|.. .+....|...+....+
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALE--LD-PN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 3456788899999999999999999987 33 33 44555556666644 4666667766654433
No 184
>2qsr_A Transcription-repair coupling factor; structural genomics, PSI-2, protein ST initiative; 3.10A {Streptococcus pneumoniae}
Probab=22.99 E-value=1.6e+02 Score=23.57 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=41.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhh
Q 025497 5 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIG 64 (252)
Q Consensus 5 ~~~~~~r~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~ 64 (252)
+||. ++.+-..=+|+ .++--+|.-++..+++.-+ ++|..+-.|||.++.=....
T Consensus 24 I~d~--~~RL~lYkria-~~~~~eel~~l~~EL~DRF---G~lP~~v~~Ll~v~~lK~~a 77 (173)
T 2qsr_A 24 ISDQ--RHKIEIYKKIR-QIDNRVNYEELQEELIDRF---GEYPDVVAYLLEIGLVKSYL 77 (173)
T ss_dssp CCCH--HHHHHHHHHHH-TCCSHHHHHHHHHHHHHHH---CSCCHHHHHHHHHHHHHHHH
T ss_pred cCCH--HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHC---CCCcHHHHHHHHHHHHHHHH
Confidence 4555 56666777777 5777888888888998855 89999999999988755554
No 185
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=22.62 E-value=2e+02 Score=20.14 Aligned_cols=59 Identities=8% Similarity=-0.094 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSS 75 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ 75 (252)
.....+|...-+.|+|++++..+++++. .+ | -+.+=...+..+|-. .+....|...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~--~~-P-~~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQ--KE-P-EREEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH--HS-T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHH--HC-C-CCHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4677889999999999999999999997 33 3 356666677777653 4555556665543
No 186
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=22.48 E-value=1.3e+02 Score=25.80 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc--------------chHhHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHP--------------IRLGLALNFSVFYYEILNQSDKACSMAKQAFE 210 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgL~LN~SVF~yei~~~~~~A~~iak~afd 210 (252)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888654 2222 122366788877665 7999999999888865
No 187
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=21.73 E-value=2.3e+02 Score=21.77 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=43.2
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhh
Q 025497 17 LAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQK 79 (252)
Q Consensus 17 ~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~ieqk 79 (252)
+|.+..+.|+|++++.++++.++ .+ |. +.+-...+..+|-. .|....|...+....+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQ--KA-PN-NVDCLEACAEMQVC-RGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH--HC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 88899999999999999999998 43 33 55666677777753 56777777777654443
No 188
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=21.14 E-value=2.4e+02 Score=20.38 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHhHhhhHHHHHHHHh---CChHHHHHHHHHHHHHHHHhhccc---CCCchHHHHH
Q 025497 156 EDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEIL---NQSDKACSMAKQAFEEAIAELDTL---GEESYKDSTL 229 (252)
Q Consensus 156 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yei~---~~~~~A~~iak~afd~ai~~ld~l---~ee~~~ds~~ 229 (252)
+.-..+|++|++.... +|+ .|=. |+++.|+++-++++.+-...+.-- .-+.|..+..
T Consensus 7 ~~ik~~h~~AF~~Is~------------aL~-----~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~ 69 (89)
T 3eab_A 7 ERVRVFHKQAFEYISI------------ALR-----IDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARR 69 (89)
T ss_dssp HHHHHHHHHHHHHHHH------------HHH-----HHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------------HHH-----hhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHH
Confidence 3456778888775543 333 2334 899999999998877665544421 3456889999
Q ss_pred HHHHHHhhHhhh
Q 025497 230 IMQLLRDNLTLW 241 (252)
Q Consensus 230 ilqlLrDNl~lW 241 (252)
+-+-|+.||..=
T Consensus 70 LQ~KM~~nL~~v 81 (89)
T 3eab_A 70 LQAKMMTNLVMA 81 (89)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999753
No 189
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=20.85 E-value=1.2e+02 Score=24.96 Aligned_cols=28 Identities=7% Similarity=0.078 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 025497 12 EQYVYLAKLAEQAERYEEMVEFMQKLVV 39 (252)
Q Consensus 12 ~~l~~~Aklaeq~ery~Dm~~~mk~~~~ 39 (252)
+.+..+|.+..+.|+|++++.++.+.+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566777888888888888888888776
No 190
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=20.66 E-value=4.4e+02 Score=25.03 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=99.9
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCHHH---HHHHHH---HHHHhhhhhhHHHHHHHHHhhhhhccCchhHHHHHHHHHHH
Q 025497 25 ERYEEMVEFMQKLVVGSTPAAELTVEE---RNLLSV---AYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSK 98 (252)
Q Consensus 25 ery~Dm~~~mk~~~~~~~~~~~Lt~eE---RnLls~---ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~k 98 (252)
++|.+-++-+++++. .. .....+| -.+|-. +|..++..-+..+..|..-.+||....+..-.+++..||.+
T Consensus 121 ~k~g~~l~~v~~~~~--~~-~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k 197 (526)
T 3iyk_A 121 EKFGKELEEVYNFMN--GE-ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDK 197 (526)
T ss_pred HHHHHHHHHHHHHHH--Hh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 456666667777664 11 3444434 345544 56677788888888888777787655555666788888887
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCcchHhHHhhhccccccchhh-ccc-chhHHH---HHHHHHHHHHHHHH------
Q 025497 99 VEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAE-FKI-GDERKA---AAEDTMQSYKAAQD------ 167 (252)
Q Consensus 99 i~~EL~~~C~eil~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE-~~~-~~~~~~---~~~~a~~aY~~A~~------ 167 (252)
+..==..+--|=-.+++.-+- =-.-|-||.--..+| +-- |.--.. ...-+...|+-.--
T Consensus 198 ~~aL~~aIe~Er~~~~EEAIq----------e~~dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI~aLtG 267 (526)
T 3iyk_A 198 IDALKNAIEVERDGMQEEAIQ----------EIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINALSG 267 (526)
T ss_pred HHHHHHHHHHHHhHHHHHHHH----------HHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 642111111111111111110 002234443333222 111 211111 12234555654332
Q ss_pred --HHhccCCCCCcchHhHhhhHHHHHHHHhCChHHHHHHHH--HHHHHHHHhhcccCCCchHHHHHHHHHHHh
Q 025497 168 --IAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAK--QAFEEAIAELDTLGEESYKDSTLIMQLLRD 236 (252)
Q Consensus 168 --~a~~~L~pt~pirLgL~LN~SVF~yei~~~~~~A~~iak--~afd~ai~~ld~l~ee~~~ds~~ilqlLrD 236 (252)
+.....|+-||--|..+|-. =+ .-.+|..-|.-+.. ..+++--.+++.+.++..+-....++--+.
T Consensus 268 idlsHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 268 IDLTHLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred CCchhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33346889999988888742 01 12233333333222 456666677777777766665555544443
Done!