Query 025503
Match_columns 252
No_of_seqs 122 out of 436
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 11:38:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 1.7E-97 6E-102 656.4 23.5 237 4-240 3-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 1.6E-97 5E-102 652.9 21.7 233 1-233 4-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.7E-96 9E-101 651.3 24.1 232 4-235 30-261 (261)
4 1o9d_A 14-3-3-like protein C; 100.0 2.6E-95 9E-100 647.3 23.4 242 2-243 5-248 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.1E-94 7.2E-99 634.0 24.1 231 4-234 4-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 2.2E-93 7.5E-98 634.5 23.9 232 3-235 26-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 1.1E-90 3.7E-95 616.9 15.5 228 3-238 27-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.4E-81 4.8E-86 547.7 21.1 217 4-230 2-226 (227)
9 3vtx_A MAMA; tetratricopeptide 95.8 0.46 1.6E-05 36.7 17.2 161 7-201 7-169 (184)
10 3nf1_A KLC 1, kinesin light ch 95.7 0.71 2.4E-05 38.1 20.3 185 6-205 28-227 (311)
11 3edt_B KLC 2, kinesin light ch 95.6 0.7 2.4E-05 37.3 16.6 59 146-205 143-201 (283)
12 2qfc_A PLCR protein; TPR, HTH, 94.7 1.7 5.7E-05 36.8 15.9 74 117-203 152-226 (293)
13 3u3w_A Transcriptional activat 94.3 2.1 7.2E-05 36.1 17.9 58 146-205 171-228 (293)
14 3hym_B Cell division cycle pro 94.0 1.8 6.3E-05 35.8 14.5 46 146-200 252-297 (330)
15 3n71_A Histone lysine methyltr 93.8 0.36 1.2E-05 45.8 10.4 100 92-205 326-425 (490)
16 4g1t_A Interferon-induced prot 93.7 1.7 5.7E-05 38.7 14.3 49 147-200 351-399 (472)
17 3fp2_A TPR repeat-containing p 93.4 3.9 0.00013 36.7 16.5 49 146-203 444-492 (537)
18 3qww_A SET and MYND domain-con 93.1 1.2 4E-05 41.5 12.7 106 92-214 315-420 (433)
19 4i17_A Hypothetical protein; T 93.0 2 6.8E-05 34.3 12.6 60 6-66 8-67 (228)
20 1fch_A Peroxisomal targeting s 92.8 3 0.0001 35.3 14.1 57 7-65 100-156 (368)
21 3qwp_A SET and MYND domain-con 92.8 0.21 7.3E-06 46.4 7.0 64 147-214 346-409 (429)
22 3ro2_A PINS homolog, G-protein 92.8 3.5 0.00012 33.7 15.9 56 146-204 199-254 (338)
23 4abn_A Tetratricopeptide repea 92.6 5.5 0.00019 36.6 16.4 172 7-201 104-286 (474)
24 4a1s_A PINS, partner of inscut 92.4 5 0.00017 34.7 21.0 190 6-205 49-255 (411)
25 3u4t_A TPR repeat-containing p 92.3 3.8 0.00013 33.1 14.9 54 148-202 197-250 (272)
26 3edt_B KLC 2, kinesin light ch 92.0 0.88 3E-05 36.7 9.2 75 120-205 43-117 (283)
27 3ulq_A Response regulator aspa 91.8 1.5 5E-05 38.4 11.0 73 118-204 101-174 (383)
28 3qww_A SET and MYND domain-con 91.7 0.86 2.9E-05 42.4 9.9 59 147-206 315-373 (433)
29 3ro2_A PINS homolog, G-protein 91.2 5.3 0.00018 32.6 21.1 190 6-205 6-215 (338)
30 3ro3_A PINS homolog, G-protein 91.2 3.2 0.00011 29.9 13.5 55 146-203 105-159 (164)
31 3n71_A Histone lysine methyltr 91.1 1.1 3.6E-05 42.5 9.8 59 147-206 326-384 (490)
32 2gw1_A Mitochondrial precursor 90.8 7.2 0.00025 34.5 14.8 56 146-202 205-266 (514)
33 2y4t_A DNAJ homolog subfamily 90.6 8.1 0.00028 33.7 14.8 47 146-201 311-357 (450)
34 4eqf_A PEX5-related protein; a 90.6 7.4 0.00025 33.1 16.9 59 6-66 66-124 (365)
35 3u4t_A TPR repeat-containing p 90.3 1.6 5.6E-05 35.4 9.2 62 3-66 1-62 (272)
36 2xpi_A Anaphase-promoting comp 90.1 11 0.00037 34.4 19.7 55 146-202 491-545 (597)
37 3sf4_A G-protein-signaling mod 89.6 8.8 0.0003 32.6 19.2 55 146-204 203-258 (406)
38 2q7f_A YRRB protein; TPR, prot 89.4 6.6 0.00022 30.8 16.1 58 7-66 59-116 (243)
39 3ieg_A DNAJ homolog subfamily 89.4 8.2 0.00028 32.0 19.1 47 146-201 288-334 (359)
40 3ulq_A Response regulator aspa 89.3 10 0.00034 32.8 18.9 176 10-204 108-295 (383)
41 2gw1_A Mitochondrial precursor 89.3 11 0.00038 33.2 15.5 171 8-202 307-478 (514)
42 4a1s_A PINS, partner of inscut 89.3 10 0.00034 32.7 17.5 178 8-204 89-294 (411)
43 4gcn_A Protein STI-1; structur 89.2 1.1 3.8E-05 33.2 6.8 48 146-202 24-71 (127)
44 2xpi_A Anaphase-promoting comp 89.2 13 0.00044 33.9 18.3 48 146-202 532-579 (597)
45 3qwp_A SET and MYND domain-con 89.1 0.44 1.5E-05 44.3 5.3 59 147-206 304-362 (429)
46 2y4t_A DNAJ homolog subfamily 88.7 11 0.00039 32.7 16.9 168 9-201 147-323 (450)
47 4b4t_Q 26S proteasome regulato 88.7 11 0.00039 32.7 17.9 183 8-204 58-247 (434)
48 2ho1_A Type 4 fimbrial biogene 88.6 8 0.00027 30.8 14.9 165 7-201 39-203 (252)
49 4gyw_A UDP-N-acetylglucosamine 88.5 20 0.00069 35.3 17.2 167 6-207 10-179 (723)
50 4eqf_A PEX5-related protein; a 88.4 11 0.00037 32.0 16.5 58 7-66 101-158 (365)
51 3q15_A PSP28, response regulat 88.3 2.4 8.3E-05 37.0 9.4 75 117-204 98-172 (378)
52 2pl2_A Hypothetical conserved 88.3 8.7 0.0003 30.8 12.9 63 1-65 1-63 (217)
53 3qky_A Outer membrane assembly 88.0 9.7 0.00033 31.0 15.8 201 5-233 15-249 (261)
54 1fch_A Peroxisomal targeting s 87.9 11 0.00038 31.6 18.0 58 6-65 65-122 (368)
55 2pl2_A Hypothetical conserved 87.5 9.7 0.00033 30.5 18.7 140 7-202 41-180 (217)
56 3sf4_A G-protein-signaling mod 87.2 13 0.00044 31.6 21.6 189 7-204 11-218 (406)
57 3q15_A PSP28, response regulat 87.1 14 0.00049 31.9 18.7 174 9-202 105-290 (378)
58 2vq2_A PILW, putative fimbrial 86.4 9.5 0.00033 29.3 16.1 167 7-202 10-176 (225)
59 3ieg_A DNAJ homolog subfamily 86.2 13 0.00045 30.7 17.6 168 9-202 124-301 (359)
60 1xnf_A Lipoprotein NLPI; TPR, 85.3 13 0.00043 29.7 12.7 49 148-201 195-243 (275)
61 3uq3_A Heat shock protein STI1 85.3 12 0.00041 29.4 16.2 31 7-37 81-111 (258)
62 3hym_B Cell division cycle pro 84.3 16 0.00053 29.9 16.8 56 146-202 209-265 (330)
63 3cv0_A Peroxisome targeting si 84.0 16 0.00055 29.8 16.2 44 6-50 22-65 (327)
64 3uq3_A Heat shock protein STI1 83.8 14 0.00048 29.0 18.5 57 6-65 6-62 (258)
65 3rkv_A Putative peptidylprolyl 83.6 1.6 5.4E-05 33.2 5.0 55 146-201 27-91 (162)
66 3u3w_A Transcriptional activat 83.0 6.3 0.00021 33.1 9.1 90 100-203 93-185 (293)
67 2q7f_A YRRB protein; TPR, prot 82.9 15 0.00051 28.7 11.5 60 6-67 24-83 (243)
68 4gco_A Protein STI-1; structur 82.9 3.7 0.00013 30.3 6.8 47 146-201 29-75 (126)
69 3fp2_A TPR repeat-containing p 82.7 25 0.00087 31.2 16.8 55 148-202 213-272 (537)
70 1elr_A TPR2A-domain of HOP; HO 81.9 9.3 0.00032 26.4 8.4 53 147-201 55-107 (131)
71 3ro3_A PINS homolog, G-protein 81.5 6.4 0.00022 28.2 7.6 55 147-204 66-120 (164)
72 3upv_A Heat shock protein STI1 80.7 13 0.00044 26.4 11.5 48 147-203 55-102 (126)
73 2e2e_A Formate-dependent nitri 79.4 18 0.00061 27.3 12.2 47 147-202 98-144 (177)
74 4gcn_A Protein STI-1; structur 78.9 6.3 0.00022 28.9 6.9 53 147-201 59-111 (127)
75 4g1t_A Interferon-induced prot 78.6 4.4 0.00015 35.9 6.9 54 147-201 68-122 (472)
76 3gw4_A Uncharacterized protein 77.9 8.9 0.0003 29.2 7.7 74 118-203 64-137 (203)
77 2l6j_A TPR repeat-containing p 77.5 7.7 0.00026 26.5 6.6 46 147-201 21-66 (111)
78 3nf1_A KLC 1, kinesin light ch 76.8 28 0.00095 28.1 19.9 180 8-202 72-307 (311)
79 3lf9_A 4E10_D0_1IS1A_001_C (T1 76.7 11 0.00039 29.1 7.6 86 19-109 11-103 (121)
80 1na3_A Designed protein CTPR2; 76.1 10 0.00036 24.7 6.8 48 146-202 25-72 (91)
81 3k9i_A BH0479 protein; putativ 75.9 9 0.00031 27.2 6.8 47 147-202 44-90 (117)
82 2ifu_A Gamma-SNAP; membrane fu 75.9 35 0.0012 28.7 13.2 52 146-200 171-222 (307)
83 3sz7_A HSC70 cochaperone (SGT) 75.5 13 0.00043 28.0 7.9 47 147-202 62-108 (164)
84 2ho1_A Type 4 fimbrial biogene 75.4 28 0.00096 27.4 16.7 61 7-69 73-133 (252)
85 2qfc_A PLCR protein; TPR, HTH, 75.4 11 0.00037 31.6 8.1 188 7-216 77-276 (293)
86 2kck_A TPR repeat; tetratricop 74.0 12 0.00041 25.1 6.8 47 147-202 23-69 (112)
87 3cv0_A Peroxisome targeting si 74.0 34 0.0012 27.8 17.2 31 7-37 57-87 (327)
88 1qqe_A Vesicular transport pro 73.5 39 0.0013 28.2 14.3 52 146-201 134-186 (292)
89 2xev_A YBGF; tetratricopeptide 73.5 15 0.00052 25.7 7.6 71 147-229 56-126 (129)
90 3ma5_A Tetratricopeptide repea 72.5 21 0.00071 24.7 10.5 57 7-65 9-65 (100)
91 2fbn_A 70 kDa peptidylprolyl i 72.3 31 0.0011 26.6 11.8 31 7-37 40-70 (198)
92 3ma5_A Tetratricopeptide repea 72.2 21 0.00073 24.6 8.6 73 146-233 23-95 (100)
93 2kc7_A BFR218_protein; tetratr 72.1 15 0.00051 24.8 6.9 48 147-202 17-64 (99)
94 2ifu_A Gamma-SNAP; membrane fu 71.8 44 0.0015 28.1 14.8 54 146-203 131-185 (307)
95 2dba_A Smooth muscle cell asso 71.5 10 0.00035 27.1 6.2 50 147-202 45-94 (148)
96 3as5_A MAMA; tetratricopeptide 71.1 27 0.00094 25.4 15.7 57 8-66 11-67 (186)
97 1w3b_A UDP-N-acetylglucosamine 70.5 49 0.0017 28.1 15.4 31 8-38 70-100 (388)
98 2xcb_A PCRH, regulatory protei 69.9 26 0.00088 25.6 8.3 48 147-203 69-116 (142)
99 3upv_A Heat shock protein STI1 69.8 15 0.00052 26.0 6.8 47 147-202 21-67 (126)
100 2kat_A Uncharacterized protein 69.4 26 0.00087 24.4 12.1 58 7-66 21-78 (115)
101 4gco_A Protein STI-1; structur 69.1 15 0.00052 26.8 6.8 47 146-201 63-109 (126)
102 2hr2_A Hypothetical protein; a 68.7 17 0.00059 29.1 7.4 55 146-202 27-86 (159)
103 2vgx_A Chaperone SYCD; alterna 68.0 16 0.00056 27.4 7.0 47 147-202 72-118 (148)
104 2lni_A Stress-induced-phosphop 67.1 19 0.00066 24.9 6.8 47 147-202 67-113 (133)
105 3sz7_A HSC70 cochaperone (SGT) 66.8 37 0.0013 25.2 11.1 29 8-36 14-42 (164)
106 1w3b_A UDP-N-acetylglucosamine 66.2 61 0.0021 27.5 15.2 43 7-50 35-77 (388)
107 1elr_A TPR2A-domain of HOP; HO 65.9 21 0.00073 24.4 6.8 50 146-204 20-69 (131)
108 3bee_A Putative YFRE protein; 65.8 7.1 0.00024 27.9 4.2 31 7-37 45-75 (93)
109 2h6f_A Protein farnesyltransfe 65.5 75 0.0026 28.3 13.7 58 6-65 98-156 (382)
110 3vtx_A MAMA; tetratricopeptide 65.3 18 0.00063 27.2 6.8 47 146-201 21-67 (184)
111 2kat_A Uncharacterized protein 64.7 26 0.0009 24.3 7.2 50 146-204 35-84 (115)
112 1hxi_A PEX5, peroxisome target 63.6 38 0.0013 24.3 11.6 32 6-37 18-49 (121)
113 3qky_A Outer membrane assembly 63.4 56 0.0019 26.2 17.2 51 146-202 113-177 (261)
114 1elw_A TPR1-domain of HOP; HOP 62.2 23 0.00079 23.7 6.3 46 147-201 55-100 (118)
115 2vyi_A SGTA protein; chaperone 61.6 29 0.00098 23.6 6.8 46 147-201 29-74 (131)
116 1elw_A TPR1-domain of HOP; HOP 61.5 30 0.001 23.1 6.8 48 146-202 20-67 (118)
117 1qqe_A Vesicular transport pro 61.3 23 0.00078 29.7 7.2 54 147-203 54-107 (292)
118 1xnf_A Lipoprotein NLPI; TPR, 61.2 43 0.0015 26.5 8.6 48 146-202 93-140 (275)
119 2vyi_A SGTA protein; chaperone 61.1 30 0.001 23.6 6.8 47 147-202 63-109 (131)
120 1a17_A Serine/threonine protei 59.5 29 0.00099 25.1 6.8 47 147-202 64-110 (166)
121 4ga2_A E3 SUMO-protein ligase 59.4 25 0.00084 26.3 6.5 30 8-37 34-63 (150)
122 4ga2_A E3 SUMO-protein ligase 59.3 28 0.00096 26.0 6.8 46 147-201 48-93 (150)
123 2dba_A Smooth muscle cell asso 58.7 32 0.0011 24.3 6.8 47 147-202 82-128 (148)
124 3gyz_A Chaperone protein IPGC; 58.5 24 0.00081 27.1 6.3 48 146-202 86-133 (151)
125 4abn_A Tetratricopeptide repea 58.4 1.1E+02 0.0036 27.7 13.2 163 16-201 79-249 (474)
126 1ihg_A Cyclophilin 40; ppiase 58.2 9.1 0.00031 34.1 4.3 54 147-201 240-301 (370)
127 1na0_A Designed protein CTPR3; 57.8 37 0.0013 22.8 6.8 46 147-201 26-71 (125)
128 2h6f_A Protein farnesyltransfe 56.8 1.1E+02 0.0036 27.3 13.6 47 8-55 203-249 (382)
129 1hz4_A MALT regulatory protein 56.8 89 0.003 26.3 17.9 55 147-202 110-164 (373)
130 1a17_A Serine/threonine protei 56.2 35 0.0012 24.6 6.8 48 146-202 29-76 (166)
131 1na0_A Designed protein CTPR3; 56.1 42 0.0014 22.5 6.8 48 146-202 59-106 (125)
132 4gfq_A Ribosome-recycling fact 56.0 27 0.00091 29.5 6.5 69 36-109 127-199 (209)
133 1lyp_A CAP18; lipopolysacchari 55.3 25 0.00087 20.1 4.3 26 81-106 4-29 (32)
134 2fbn_A 70 kDa peptidylprolyl i 55.3 33 0.0011 26.4 6.8 49 147-201 55-116 (198)
135 2yhc_A BAMD, UPF0169 lipoprote 54.9 76 0.0026 25.0 19.6 63 6-69 5-69 (225)
136 1hh8_A P67PHOX, NCF-2, neutrop 54.3 36 0.0012 26.1 6.8 47 146-201 53-99 (213)
137 2xcb_A PCRH, regulatory protei 54.2 59 0.002 23.5 10.7 29 8-36 21-49 (142)
138 3urz_A Uncharacterized protein 53.8 35 0.0012 26.8 6.8 32 5-36 4-35 (208)
139 3urz_A Uncharacterized protein 53.6 78 0.0027 24.7 13.8 27 11-37 60-86 (208)
140 3caz_A BAR protein; thermo-aci 52.9 1E+02 0.0035 25.8 9.8 108 11-162 100-210 (294)
141 3gw4_A Uncharacterized protein 52.3 71 0.0024 23.9 18.9 74 118-204 105-178 (203)
142 2hr2_A Hypothetical protein; a 51.4 29 0.00098 27.7 5.8 78 147-230 74-154 (159)
143 2kck_A TPR repeat; tetratricop 50.9 50 0.0017 21.7 8.2 28 9-36 10-37 (112)
144 1kt0_A FKBP51, 51 kDa FK506-bi 50.8 25 0.00084 32.0 6.0 53 147-201 285-345 (457)
145 2v5f_A Prolyl 4-hydroxylase su 50.5 62 0.0021 22.7 7.6 54 147-202 22-75 (104)
146 1dd5_A Ribosome recycling fact 50.2 40 0.0014 27.8 6.6 73 36-109 103-175 (185)
147 3gyz_A Chaperone protein IPGC; 50.1 82 0.0028 23.9 9.7 45 6-51 37-81 (151)
148 1wao_1 Serine/threonine protei 49.6 34 0.0012 31.4 6.8 12 148-159 24-35 (477)
149 3as5_A MAMA; tetratricopeptide 49.5 52 0.0018 23.8 6.8 47 147-202 93-139 (186)
150 2vsy_A XCC0866; transferase, g 48.4 1.6E+02 0.0055 26.8 14.9 31 7-37 25-55 (568)
151 2ooe_A Cleavage stimulation fa 48.1 22 0.00074 32.5 5.2 53 146-207 62-114 (530)
152 1ise_A Ribosome recycling fact 48.1 42 0.0014 27.7 6.4 69 36-109 103-175 (185)
153 2vq2_A PILW, putative fimbrial 48.0 86 0.0029 23.6 16.6 164 7-201 44-210 (225)
154 3k9i_A BH0479 protein; putativ 47.5 68 0.0023 22.3 9.5 58 7-66 29-86 (117)
155 2c2l_A CHIP, carboxy terminus 46.8 32 0.0011 28.7 5.8 50 151-204 52-103 (281)
156 2vgx_A Chaperone SYCD; alterna 46.7 59 0.002 24.1 6.8 46 147-201 38-83 (148)
157 1eh1_A Ribosome recycling fact 46.6 42 0.0014 27.7 6.2 73 36-109 104-176 (185)
158 1ge9_A Ribosome recycling fact 46.6 69 0.0024 26.3 7.5 71 35-109 104-174 (184)
159 1zu2_A Mitochondrial import re 46.4 29 0.00098 27.7 5.0 93 127-233 43-142 (158)
160 1is1_A Ribosome recycling fact 46.1 45 0.0015 27.5 6.3 69 36-109 103-175 (185)
161 3rkv_A Putative peptidylprolyl 44.9 90 0.0031 22.9 11.7 71 147-234 80-150 (162)
162 1wqg_A Ribosome recycling fact 44.8 48 0.0016 27.3 6.3 68 36-108 103-174 (185)
163 1na3_A Designed protein CTPR2; 44.3 60 0.0021 20.7 6.5 58 7-66 11-68 (91)
164 1hxi_A PEX5, peroxisome target 44.0 84 0.0029 22.3 8.2 57 7-65 53-109 (121)
165 3q49_B STIP1 homology and U bo 43.9 79 0.0027 22.0 14.4 49 147-204 60-108 (137)
166 2crb_A Nuclear receptor bindin 43.9 95 0.0032 22.9 8.7 37 10-57 17-56 (97)
167 2v5f_A Prolyl 4-hydroxylase su 42.7 84 0.0029 21.9 10.9 65 1-66 1-71 (104)
168 1hz4_A MALT regulatory protein 42.6 53 0.0018 27.8 6.6 53 147-203 31-83 (373)
169 2wh5_A Acyl-COA-binding domain 42.6 37 0.0013 25.4 4.8 36 19-54 10-46 (106)
170 2r5s_A Uncharacterized protein 42.2 58 0.002 24.5 6.2 32 7-38 110-141 (176)
171 2kc7_A BFR218_protein; tetratr 42.2 40 0.0014 22.4 4.7 29 9-37 4-32 (99)
172 1hh8_A P67PHOX, NCF-2, neutrop 41.7 53 0.0018 25.1 5.9 55 146-201 87-149 (213)
173 2l6j_A TPR repeat-containing p 40.8 38 0.0013 22.7 4.5 30 7-36 6-35 (111)
174 2yhc_A BAMD, UPF0169 lipoprote 40.8 90 0.0031 24.5 7.4 49 147-201 21-69 (225)
175 1xi4_A Clathrin heavy chain; a 38.6 3.5E+02 0.012 29.6 12.9 24 177-200 1284-1307(1630)
176 3eab_A Spastin; spastin, MIT, 38.6 1.1E+02 0.0038 22.2 7.5 68 147-231 7-80 (89)
177 2e2e_A Formate-dependent nitri 36.8 70 0.0024 23.7 5.8 49 146-202 60-110 (177)
178 2xev_A YBGF; tetratricopeptide 36.0 1E+02 0.0035 21.1 9.8 58 8-66 5-64 (129)
179 4gyw_A UDP-N-acetylglucosamine 35.5 69 0.0023 31.5 6.8 47 146-201 93-139 (723)
180 2pzi_A Probable serine/threoni 35.3 3E+02 0.01 26.1 12.1 125 8-199 436-560 (681)
181 3onj_A T-snare VTI1; helix, HA 35.3 1.3E+02 0.0043 21.8 9.2 79 21-99 10-90 (97)
182 2wb7_A PT26-6P; extra chromoso 33.5 1E+02 0.0034 29.4 7.2 53 134-188 436-489 (526)
183 1wao_1 Serine/threonine protei 33.2 69 0.0024 29.3 6.1 48 146-202 56-103 (477)
184 2g0u_A Type III secretion syst 33.1 21 0.00073 26.3 2.0 59 117-182 5-67 (92)
185 2if4_A ATFKBP42; FKBP-like, al 31.8 38 0.0013 29.3 3.9 49 147-201 196-258 (338)
186 3ub0_A Non-structural protein 31.7 34 0.0012 28.4 3.2 39 146-204 19-57 (199)
187 4h7y_A Dual specificity protei 28.9 63 0.0021 26.1 4.3 74 112-199 9-86 (161)
188 3u64_A Protein TP_0956; tetrat 27.9 73 0.0025 28.2 5.0 62 127-201 206-268 (301)
189 2ond_A Cleavage stimulation fa 27.8 2.5E+02 0.0087 23.0 17.3 52 146-202 219-270 (308)
190 3iyk_A VP5; icosahedral virus; 27.8 2.8E+02 0.0097 26.3 9.1 188 19-227 121-337 (526)
191 4i17_A Hypothetical protein; T 27.7 2.1E+02 0.007 22.0 13.3 58 7-66 44-101 (228)
192 2c2l_A CHIP, carboxy terminus 27.5 79 0.0027 26.2 5.1 31 6-36 5-35 (281)
193 3q49_B STIP1 homology and U bo 27.3 1.5E+02 0.0053 20.4 11.4 44 6-50 10-53 (137)
194 3flv_A Acyl-COA-binding domain 27.1 1.4E+02 0.0047 22.8 5.8 36 19-54 26-62 (119)
195 2ooe_A Cleavage stimulation fa 26.5 3.5E+02 0.012 24.2 16.4 52 146-203 441-493 (530)
196 1ya0_A SMG-7 transcript varian 25.0 24 0.00084 33.3 1.4 47 126-184 158-210 (497)
197 2vsy_A XCC0866; transferase, g 24.4 1.5E+02 0.0052 27.0 6.8 20 18-37 2-21 (568)
198 2efl_A Formin-binding protein 24.2 1.4E+02 0.0049 25.0 6.2 16 146-161 188-203 (305)
199 4b4t_Q 26S proteasome regulato 24.0 3.3E+02 0.011 23.0 21.9 55 146-203 151-205 (434)
200 3cjl_A Domain of unknown funct 24.0 43 0.0015 24.4 2.2 33 18-51 24-56 (88)
201 2x3v_A Syndapin I, protein kin 23.1 1.6E+02 0.0054 25.4 6.4 76 21-100 36-116 (337)
202 1ouv_A Conserved hypothetical 21.3 3E+02 0.01 21.6 13.7 42 8-52 41-86 (273)
203 2r5s_A Uncharacterized protein 21.0 2.4E+02 0.0083 20.8 6.4 44 6-50 7-50 (176)
204 1p5q_A FKBP52, FK506-binding p 20.6 3.8E+02 0.013 22.6 12.2 98 8-107 199-297 (336)
205 2w2u_A Hypothetical P60 katani 20.6 1.2E+02 0.0042 21.3 4.1 27 7-33 21-47 (83)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=1.7e-97 Score=656.43 Aligned_cols=237 Identities=62% Similarity=0.993 Sum_probs=224.0
Q ss_pred cHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHH
Q 025503 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (252)
Q Consensus 4 ~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i 83 (252)
+|++++|+||||+||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++++|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999878888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC--chHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHh
Q 025503 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSG--ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAA 161 (252)
Q Consensus 84 ~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~ 161 (252)
++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhhcCCCCCc
Q 025503 162 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEG 240 (252)
Q Consensus 162 ~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~e~~~~~ 240 (252)
++||||||+||||+||||||||||+|++++||.+|++|||+|++++|+|+|++|+|||+||||||||||+||++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999987765
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.6e-97 Score=652.86 Aligned_cols=233 Identities=58% Similarity=0.911 Sum_probs=229.0
Q ss_pred CcccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHH
Q 025503 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV 80 (252)
Q Consensus 1 ~~~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~ 80 (252)
|+|+|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus 4 ~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 4 GSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp TTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred ccccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025503 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (252)
Q Consensus 81 ~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a 160 (252)
+.+++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhh
Q 025503 161 ASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 233 (252)
Q Consensus 161 ~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~ 233 (252)
+++||||||+||||+||||||||||+|++++||++||+|||+|++++|+|+|++|+|||+||||||||||+||
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9899999999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.7e-96 Score=651.29 Aligned_cols=232 Identities=78% Similarity=1.167 Sum_probs=227.7
Q ss_pred cHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHH
Q 025503 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (252)
Q Consensus 4 ~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i 83 (252)
+|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i 109 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 109 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 025503 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (252)
Q Consensus 84 ~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 163 (252)
++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 110 ~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~ 189 (261)
T 3ubw_A 110 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhhcC
Q 025503 164 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (252)
Q Consensus 164 L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~e 235 (252)
||||||+||||+||||||||||+|++++||.+||+|||+||+++|+|+||+|+|||+||||||||||+|+++
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.6e-95 Score=647.26 Aligned_cols=242 Identities=71% Similarity=1.104 Sum_probs=224.4
Q ss_pred cccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhH
Q 025503 2 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (252)
Q Consensus 2 ~~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~--~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~ 79 (252)
+++|++++|+|||++|||||+||+++||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 5 ~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~ 84 (260)
T 1o9d_A 5 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH 84 (260)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHH
Confidence 3789999999999999999999999999999998 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025503 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (252)
Q Consensus 80 ~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 159 (252)
++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 85 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 164 (260)
T 1o9d_A 85 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 164 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhhcCCCCC
Q 025503 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 239 (252)
Q Consensus 160 a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~e~~~~ 239 (252)
|+.+||||||+||||+||||||||||+|++++||.+|++|||+|++++|+|+|++|+|+|+||||||||||+|+++.+++
T Consensus 165 A~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~~ 244 (260)
T 1o9d_A 165 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 244 (260)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-----
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCcc
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred ccch
Q 025503 240 GGEC 243 (252)
Q Consensus 240 ~~~~ 243 (252)
+++.
T Consensus 245 ~~~~ 248 (260)
T 1o9d_A 245 GADE 248 (260)
T ss_dssp ----
T ss_pred cccc
Confidence 6653
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.1e-94 Score=633.96 Aligned_cols=231 Identities=78% Similarity=1.165 Sum_probs=227.2
Q ss_pred cHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHH
Q 025503 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (252)
Q Consensus 4 ~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i 83 (252)
+|++++|+||||+|||||+||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++++|++.+++.+
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i 83 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 83 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 025503 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (252)
Q Consensus 84 ~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 163 (252)
++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+.+
T Consensus 84 ~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 163 (234)
T 2br9_A 84 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 163 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhhc
Q 025503 164 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTS 234 (252)
Q Consensus 164 L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~ 234 (252)
||||||+||||+||||||||||+|++++||.+|++|||+|++++|+|+||+|+|+|+||||||||||+|++
T Consensus 164 L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 164 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=2.2e-93 Score=634.48 Aligned_cols=232 Identities=62% Similarity=0.996 Sum_probs=226.1
Q ss_pred ccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhH
Q 025503 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLD---VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (252)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~---~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~ 79 (252)
++|++++|+|||++|||||+||+++||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 359999999999999999999999999999998 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025503 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (252)
Q Consensus 80 ~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 159 (252)
++.|++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHhhHhhhhcC
Q 025503 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (252)
Q Consensus 160 a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~e 235 (252)
| .+||||||+||||+||||||||||+|++++||++|++|||+|++++|+|+||+|+|+|+||||||||||+|+++
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=1.1e-90 Score=616.92 Aligned_cols=228 Identities=23% Similarity=0.431 Sum_probs=196.7
Q ss_pred ccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhh-hhhCc-hhHH
Q 025503 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EQNV 80 (252)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~-~~~~~-~~~~ 80 (252)
|+|++++|+|||||||||||||+++| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.++
T Consensus 27 m~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~ 103 (268)
T 3efz_A 27 MKLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFI 103 (268)
T ss_dssp -------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHH
Confidence 78999999999999999999999999 7889999999999999999999999999999999999999 67787 8889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025503 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (252)
Q Consensus 81 ~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a 160 (252)
+.+++||++|++||..+|++||++||++|||.++++ +||||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 104 ~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA 182 (268)
T 3efz_A 104 QVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRE 182 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH---HHHhhccCCccchHHHHHHHHHHHhhHhhhhcC
Q 025503 161 ASEL--PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE---AIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 235 (252)
Q Consensus 161 ~~~L--~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~---Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~~e 235 (252)
+++| |||||||||||||||||||||+|+|++||.+||+|||+ ||+++|+|+|++ |+||||||||||+|+++
T Consensus 183 ~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd 258 (268)
T 3efz_A 183 RSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQG 258 (268)
T ss_dssp HHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTT
T ss_pred HHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhcc
Confidence 8889 99999999999999999999999999999999999999 999999999987 99999999999999998
Q ss_pred CCC
Q 025503 236 LPE 238 (252)
Q Consensus 236 ~~~ 238 (252)
.++
T Consensus 259 ~~~ 261 (268)
T 3efz_A 259 CSG 261 (268)
T ss_dssp CCT
T ss_pred ccc
Confidence 665
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.4e-81 Score=547.69 Aligned_cols=217 Identities=21% Similarity=0.236 Sum_probs=199.1
Q ss_pred cHhhHH---HHHHHHHHhCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCc
Q 025503 4 EREHHV---YLARLAEQAERYDEMVEAMKKVAK----LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN 76 (252)
Q Consensus 4 ~re~~~---~~Aklaeq~ery~dm~~~mk~~i~----~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~ 76 (252)
+|++++ |+||||+||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|+++||++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 588999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHH
Q 025503 77 EQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (252)
Q Consensus 77 ~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A 156 (252)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8889999999999999999999999999999999998 999999999999999999999998 88999999999
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccC-CccchHHHHHHHHHHHhhHh
Q 025503 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL-NEESYKDSTLIMQLLRDNLT 230 (252)
Q Consensus 157 ~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l-~ee~y~ds~~IlqlLrdNl~ 230 (252)
+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+--.+..- +.+.++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhcc
Confidence 999998999999999999999999999999999999999999999763222211 22458889999999999985
No 9
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.83 E-value=0.46 Score=36.75 Aligned_cols=161 Identities=16% Similarity=0.148 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhH-HHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN-VKRIKE 85 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~-~~~i~~ 85 (252)
-+..++.+..+-|+|++++.+++++++.+|.- .+=...+..+|-. .+....+...+.......+. .... .....-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTT--SAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCch--hHHHHHHHHHH
Confidence 34568888999999999999999999988763 4445555666543 34444444444333222111 1110 000000
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccC
Q 025503 86 YRQ-RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASEL 164 (252)
Q Consensus 86 yk~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 164 (252)
+.. .=-++-...+..++.+ -|.. .. .+...|..|.-. |+ -+.|.+.|++|+++
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~-----~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~----- 136 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIAL-----NTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI----- 136 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHcCCHHHHHHHHHHHHHh-----Cccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh-----
Confidence 000 0001111222222221 2321 11 122335544322 11 35789999999865
Q ss_pred CCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 165 PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 165 ~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 34443 345555655554 7999999988877764
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.71 E-value=0.71 Score=38.05 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhh-hhh--hC
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKL-------DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQK-EEA--KG 75 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~-------~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~-~~~--~~ 75 (252)
+-+..++.+....|+|++++.+++++++. +.+....=...+..+|-. .+....|...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34567888888999999999999998864 222222333344444322 23344444444322111 000 00
Q ss_pred chhHH----HHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHH
Q 025503 76 NEQNV----KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSL 150 (252)
Q Consensus 76 ~~~~~----~~i~~yk-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~ 150 (252)
..... ....-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 01000 0110010 0001223334444444443321111 122233333445555332 11 35799
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 151 KAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 151 ~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
..|++|+++++...++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999887788889888888888877766 69999999999999876543
No 11
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.61 E-value=0.7 Score=37.28 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
.+.|...|++|+++++...++.+|.......|.+..++. .|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 357999999999998877888899888888888877776 69999999999999886543
No 12
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.72 E-value=1.7 Score=36.76 Aligned_cols=74 Identities=9% Similarity=0.078 Sum_probs=51.1
Q ss_pred chHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcc-hHHHhhhHHHHHHHhhCChHHHHHH
Q 025503 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPI-RLGLALNFSVFYYEILNSPERACHL 195 (252)
Q Consensus 117 eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pi-rLgL~LN~SVF~yEi~~~~~~A~~i 195 (252)
...+..+...|..|...-. -+.|...|++|+++++. .+. +|. ...+..|.+..|+. +|+.++|+..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~-~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHD-NEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp THHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCc-cccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 3344444556777754322 35799999999999864 443 332 23566777777665 7999999999
Q ss_pred HHHHHHHH
Q 025503 196 AKQAFDEA 203 (252)
Q Consensus 196 ak~afd~A 203 (252)
.++|++-+
T Consensus 219 ~~kal~~~ 226 (293)
T 2qfc_A 219 VNKAIEIS 226 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998766
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.29 E-value=2.1 Score=36.08 Aligned_cols=58 Identities=10% Similarity=0.104 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
-++|...|++|++.++. ++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 36799999999999864 666677777788999998887 79999999999999887643
No 14
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=94.04 E-value=1.8 Score=35.79 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~af 200 (252)
.+.|...|++|+++. |.+| ....+.+..++. +|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHSL-MGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 357899999998763 3343 234455555544 799999998777765
No 15
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.75 E-value=0.36 Score=45.81 Aligned_cols=100 Identities=8% Similarity=0.069 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025503 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (252)
Q Consensus 92 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 171 (252)
+|-..+|...+.+-...|=|.. + ..+=-+..-|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4556677777777766654442 1 112122223444433311 25799999999999988999999999
Q ss_pred HHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 172 LGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 172 LgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
+....|.++.|+. .|+.++|..+.++|++--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998877 69999999999998865443
No 16
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=93.67 E-value=1.7 Score=38.71 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~af 200 (252)
++|.++|++|+++ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999854 344555556678888888778999999988766654
No 17
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=93.42 E-value=3.9 Score=36.65 Aligned_cols=49 Identities=12% Similarity=0.134 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
.+.|...|++|+++ .|.+| ....+.+..++. .|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhC
Confidence 46788888888765 34554 344555555554 799999999888887654
No 18
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.14 E-value=1.2 Score=41.51 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 025503 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (252)
Q Consensus 92 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 171 (252)
+|-..+|...+.+-.+.|=|... ..+=-+.--|.-|+.. | + -+.|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp---~~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNV---YMLHMMYQAMGVCLYM-----Q-D----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhch---HHHHHHHHHHHHHHhh-----c-C----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 45566777777777766644431 1111122224444322 1 1 34799999999999988999999999
Q ss_pred HHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccc
Q 025503 172 LGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEES 214 (252)
Q Consensus 172 LgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~ 214 (252)
.....|.++-|+. .|+.++|..+-++|++--... +.+++
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~H 420 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKDH 420 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTTC
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCCC
Confidence 9999999988776 799999999999987765443 45544
No 19
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=92.99 E-value=2 Score=34.30 Aligned_cols=60 Identities=15% Similarity=0.020 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
+.+..++.+..+.|+|++++.++.++++.+|.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 56778899999999999999999999988774444444445555543 4555566666543
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.82 E-value=3 Score=35.31 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
-+..++.+....|+|++++.+++++++.+|. +.+=...+..+|-. .+....|...+.
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456777788888888888888888877655 34444455555443 344444554444
No 21
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.77 E-value=0.21 Score=46.39 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccc
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEES 214 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~ 214 (252)
+.|...|++|+++-+..++|.||.......|.++-|.. .|+.++|..+.++|++--... +.+++
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~~---lG~~H 409 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRVT---HGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTTS
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHh---cCCCC
Confidence 57999999999999889999999999999999998877 799999999999888754433 45554
No 22
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.75 E-value=3.5 Score=33.74 Aligned_cols=56 Identities=18% Similarity=-0.063 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.+.|...|++|++++... .+|...+.+++.-...|...|+.++|+...+++++-+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 357899999999988652 23444454554445555668999999999888876543
No 23
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.56 E-value=5.5 Score=36.56 Aligned_cols=172 Identities=18% Similarity=0.112 Sum_probs=89.6
Q ss_pred hHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHH
Q 025503 7 HHVYLARLAEQAERY-DEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKE 85 (252)
Q Consensus 7 ~~~~~Aklaeq~ery-~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~ 85 (252)
-+..++++....|+| ++++.+++++++.+|.. .+=...|..+|-.. +....|...+....+..+. ......+-.-
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~~ 179 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSMV 179 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHHH
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHHH
Confidence 345667777777888 88888888887776653 44555555555432 4444444444332211111 0111111111
Q ss_pred HHH----------HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHH
Q 025503 86 YRQ----------RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEA 155 (252)
Q Consensus 86 yk~----------ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~ 155 (252)
|.. .=-++-...++..+.+ -|.. ..++ -..|..|... -+..+. ...-.+.|..+|++
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~~--~~lg~~~~~~-~~~~~~-~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRSW--YILGNAYLSL-YFNTGQ-NPKISQQALSAYAQ 246 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHH-HHHTTC-CHHHHHHHHHHHHH
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHH-HHhhcc-ccchHHHHHHHHHH
Confidence 111 1112333334444442 2321 1222 2335555433 011222 12236789999999
Q ss_pred HHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 156 ATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 156 A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 247 al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 247 AEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9976 23222556677788777766 7999999988888765
No 24
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=92.39 E-value=5 Score=34.69 Aligned_cols=190 Identities=13% Similarity=0.022 Sum_probs=98.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHH-
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVE----ERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV- 80 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~e----ERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~- 80 (252)
..+..++....+.|+|++++.+++++++..+. +.+ =...+..+|- ..+....+...+....+.....++....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 126 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEA 126 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHH
Confidence 34567888888999999999999999987665 222 2233444433 2344455555543322111111111100
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccc----c---CccchHHHHHH
Q 025503 81 ----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEF----K---GADDRKEAADH 148 (252)
Q Consensus 81 ----~~i~~y-k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~----~---~~~~~~~~~~~ 148 (252)
.+..-| ...=-++-...+..++.+.... .+....+..+...|..|...-.. . ..++-....+.
T Consensus 127 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~ 201 (411)
T 4a1s_A 127 KSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTR 201 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHH
Confidence 000000 0001123334444455544331 12223333334445555444330 0 01122334678
Q ss_pred HHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 149 SLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 149 A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
|...|++|++++... +.+|.......+.+..+ .-.|+.++|+...++|+.-+-.
T Consensus 202 A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 202 AVEFYQENLKLMRDL--GDRGAQGRACGNLGNTY-YLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHh
Confidence 999999999988652 22344444455555544 4589999999999888776543
No 25
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.29 E-value=3.8 Score=33.09 Aligned_cols=54 Identities=13% Similarity=0.016 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 148 ~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.|...|++|+++....-.+.++.......+.+.+ |...|+.++|+...++|+.-
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYY-YTINRDKVKADAAWKNILAL 250 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhc
Confidence 4788999999998543222222222344444444 45589999999988887753
No 26
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.00 E-value=0.88 Score=36.68 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=56.0
Q ss_pred hHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHH
Q 025503 120 VFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQA 199 (252)
Q Consensus 120 vfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~a 199 (252)
+-.+...|..|...-. .+.|...|++|+++++..+.+.+|.......+.+..++. .|+.++|+...++|
T Consensus 43 ~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a 111 (283)
T 3edt_B 43 ATMLNILALVYRDQNK----------YKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRA 111 (283)
T ss_dssp HHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccc----------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 3334455666644322 357999999999999887788888877777777776654 79999999999999
Q ss_pred HHHHHH
Q 025503 200 FDEAIA 205 (252)
Q Consensus 200 fd~Ai~ 205 (252)
++.+-.
T Consensus 112 l~~~~~ 117 (283)
T 3edt_B 112 LEIREK 117 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 27
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.76 E-value=1.5 Score=38.38 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=49.6
Q ss_pred hHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHh-hhHHHHHHHhhCChHHHHHHH
Q 025503 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLA-LNFSVFYYEILNSPERACHLA 196 (252)
Q Consensus 118 skvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~-LN~SVF~yEi~~~~~~A~~ia 196 (252)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . + +|...+.+ .+.+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 445666678887754322 35799999999998854 3 2 44444444 45555554 489999999999
Q ss_pred HHHHHHHH
Q 025503 197 KQAFDEAI 204 (252)
Q Consensus 197 k~afd~Ai 204 (252)
++|++-+-
T Consensus 167 ~~al~~~~ 174 (383)
T 3ulq_A 167 RQAYEIYK 174 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887543
No 28
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.75 E-value=0.86 Score=42.44 Aligned_cols=59 Identities=10% Similarity=0.024 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHh
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAE 206 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ 206 (252)
+.|...|++|+++.++-|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--...
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 46788999999999889999999999998888887766 799999999999997765443
No 29
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.25 E-value=5.3 Score=32.61 Aligned_cols=190 Identities=11% Similarity=0.007 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH----HHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhH-H
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEE----RNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN-V 80 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eE----RnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~-~ 80 (252)
..+...+....+.|+|++++.+++++++..|. +.+. ...+..+|- ..+....+...+.....-.+..+.... .
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 45677889999999999999999999987655 3221 223333332 233444444444332211111111111 0
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhccccccccccc----------CccchHHH
Q 025503 81 ----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFK----------GADDRKEA 145 (252)
Q Consensus 81 ----~~i~~y-k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~----------~~~~~~~~ 145 (252)
....-| ...--++-...+...+.+... ..++...+..+...|..|...-... ..++-...
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 000001 001112233344444444433 2233334444455566665554411 01122334
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 205 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 205 (252)
.+.|...|++|+.++.. . +.+|.......+.+. .|.-.|+.++|+...+++++-+-.
T Consensus 159 ~~~A~~~~~~a~~~~~~-~-~~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA-L-GDRAAQGRAFGNLGN-THYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHH-H-TCHHHHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c-CCHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHh
Confidence 67888999999988764 2 223444444444544 445589999999999998876543
No 30
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=91.17 E-value=3.2 Score=29.94 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
-+.|...|++|++++.. .+ .+|.......+.+..+ .-.|+.++|+...++|++-+
T Consensus 105 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 35789999999999864 22 2333334445555544 55799999999988887654
No 31
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.07 E-value=1.1 Score=42.52 Aligned_cols=59 Identities=19% Similarity=0.101 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHh
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAE 206 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ 206 (252)
+.|...|++|+++.++-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 35677899999999889999999999999999888877 699999999999998765444
No 32
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=90.84 E-value=7.2 Score=34.47 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----cchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASEL--PPTH----PIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L--~pt~----PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|++.-...+ .|.+ |.......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 5678888888887433223 4444 5566666666666655 79999999998887653
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=90.61 E-value=8.1 Score=33.69 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|...|++|+++ .|.+| ....+.+..+ ...|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAY-LIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 45688888888765 34444 3444555544 457999999998888764
No 34
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=90.56 E-value=7.4 Score=33.11 Aligned_cols=59 Identities=8% Similarity=-0.068 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
+.++.++....+.|+|++++.++++++..+|.- .+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 347888999999999999999999999887653 4555556665543 3455556655543
No 35
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.27 E-value=1.6 Score=35.37 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=39.0
Q ss_pred ccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 3 ~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
|+-+.++.+|....+.|+|++++.+++++++.+|.-. +-...+..+|-. .+....|...+..
T Consensus 1 ~n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~-~~~~~~A~~~~~~ 62 (272)
T 3u4t_A 1 MNDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAVCYYE-LAKYDLAQKDIET 62 (272)
T ss_dssp ----CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 3456788899999999999999999999998876532 233344444332 3444445444443
No 36
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=90.14 E-value=11 Score=34.38 Aligned_cols=55 Identities=9% Similarity=0.008 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|.+.|++|+++... . +.+|-....+++.-...|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46799999999988753 2 3466653334443344455589999999999888764
No 37
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=89.63 E-value=8.8 Score=32.60 Aligned_cols=55 Identities=18% Similarity=0.022 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHH-HhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLG-LALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLg-L~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.+.|...|++|++++.. . + +|...+ ...|.+.. |...|+.++|+...++|++-+-
T Consensus 203 ~~~A~~~~~~al~~~~~-~-~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKE-F-G-DKAAERRAYSNLGNA-YIFLGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp HHHHHHHHHHHHHHHHH-T-T-CHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c-C-CcHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHHH
Confidence 35788899999988865 2 2 233333 34444444 4457999999888888876543
No 38
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=89.42 E-value=6.6 Score=30.84 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..+|.+..+.|+|++++.++++++...+. +..-...+..+|-. .+....|...+..
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 3456677777888888888888888776554 23333344444432 2344444444443
No 39
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.41 E-value=8.2 Score=31.97 Aligned_cols=47 Identities=11% Similarity=0.058 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35788888888765 34443 35556665554 47999999888877764
No 40
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.31 E-value=10 Score=32.84 Aligned_cols=176 Identities=9% Similarity=-0.000 Sum_probs=91.1
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH-----HHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCc-hhHHHHH
Q 025503 10 YLARLAEQAERYDEMVEAMKKVAKLDVELTV-----EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN-EQNVKRI 83 (252)
Q Consensus 10 ~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~-----eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~-~~~~~~i 83 (252)
+++.+....|+|++++.++++....-..... +=...+..+|-. .+..-.|...+.....--+..+. ......+
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3788888899999999999999875333332 222334444433 33344444433221111111111 0000000
Q ss_pred -----HHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHH
Q 025503 84 -----KEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAAT 157 (252)
Q Consensus 84 -----~~yk-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~ 157 (252)
.-|. ..=-++=...++..+++... ..++......+...|..|...-. -+.|...|++|+
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al 251 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEA-----EKQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-----cCChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHH
Confidence 0000 00012223333444444332 12223333333345666643321 467999999999
Q ss_pred HHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 158 AAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 158 ~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
++++..-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 252 ~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99865322 14444455566665555 7999999999999887654
No 41
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.26 E-value=11 Score=33.24 Aligned_cols=171 Identities=11% Similarity=-0.056 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHH
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYR 87 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk 87 (252)
+..++.+..+.|+|++++.+++++++..|.-. +-...+..+|- ..+....+...+.......+.. .........-|.
T Consensus 307 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~ 383 (514)
T 2gw1_A 307 YYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAY-RENKFDDCETLFSEAKRKFPEA-PEVPNFFAEILT 383 (514)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccC-HHHHHHHHHHHH
Confidence 45677788888888888888888887766633 33333444432 2344555555554433222111 111111111110
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025503 88 -QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (252)
Q Consensus 88 -~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 166 (252)
..--++-....+.++.+- |........+..+-..|..|.... ..| -.+.|...|++|+++ .|
T Consensus 384 ~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-----~~ 446 (514)
T 2gw1_A 384 DKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-----DP 446 (514)
T ss_dssp HTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----CT
T ss_pred HCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----Cc
Confidence 111122223333333322 222111111112223344432200 012 245788999998865 34
Q ss_pred CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 167 t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 447 ~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 447 RSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp TCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred ccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 443 33445555444 479999999988887764
No 42
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=89.25 E-value=10 Score=32.71 Aligned_cols=178 Identities=11% Similarity=0.009 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchh----
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELT-----VEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQ---- 78 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~-----~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~---- 78 (252)
+..++.+....|+|++++.++++.++...... ..=...+..+|- ..+....|...+.....-.+..++..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 167 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGR 167 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 45778888889999999999998876522111 112223333332 23444444444433221111111110
Q ss_pred -HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCc
Q 025503 79 -NVKRIKEYRQR-V-----------------EDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGA 139 (252)
Q Consensus 79 -~~~~i~~yk~k-i-----------------~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~ 139 (252)
...+..-|... - -++-...+...+.+.... .+....+..+...|..|...-.
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~---- 238 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD---- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC----
Confidence 01111111111 0 233444455555554332 1222333344445665544321
Q ss_pred cchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 140 DDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 140 ~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.+.|...|++|++++.. . .++...+.+++.-...|--.|+.++|+...++|++.+-
T Consensus 239 ------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ------FQAAIEHHQERLRIARE-F--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ------HHHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHHh-c--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 35688889999888764 2 13333444444444445557999999888888876654
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.19 E-value=1.1 Score=33.25 Aligned_cols=48 Identities=15% Similarity=0.240 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
-+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 35799999999865 45554 455677777776 79999999999988764
No 44
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=89.16 E-value=13 Score=33.86 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+++. |.+| ....+.+.. |...|+.++|....+++++-
T Consensus 532 ~~~A~~~~~~~~~~~-----p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 532 YDAAIDALNQGLLLS-----TNDA---NVHTAIALV-YLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHHHHHHS-----SCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHhc
Confidence 457888999888652 5554 333344443 45589999999988887753
No 45
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.10 E-value=0.44 Score=44.26 Aligned_cols=59 Identities=14% Similarity=0.069 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHh
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAE 206 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ 206 (252)
+.|...|++|+++.++-|+|.||..+...-|-+.-|.. .|+.++|..+.++++.--..-
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHH
Confidence 45677788888777778999999999999998887766 799999999999987665443
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.74 E-value=11 Score=32.72 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=84.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHH
Q 025503 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQ 88 (252)
Q Consensus 9 ~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ 88 (252)
..+|.+..+.|+|++++.++.++++..|. +..-...+..+|-. .+....|...+....+..+.. .........-|..
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 223 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTLYYQ 223 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 34577788899999999999999987654 44445555555543 344555555554433222110 0111111111111
Q ss_pred -HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhh--------hcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025503 89 -RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKM--------KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (252)
Q Consensus 89 -ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 159 (252)
.=-++-....+.++.+ -|.. ......+..+ .|+.+.- .| -.+.|...|++|+++
T Consensus 224 ~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~l~~ 286 (450)
T 2y4t_A 224 LGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESVMKT 286 (450)
T ss_dssp TTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh-----CCCh--HHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHHHhc
Confidence 0011112222222221 2221 1111111011 1222211 11 145788889888763
Q ss_pred HhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 160 a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.|.+|....-+++.-.-.|.-.|+.++|+...++++.
T Consensus 287 -----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 287 -----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp -----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred -----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4667765544444444455568999999999988764
No 47
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.67 E-value=11 Score=32.67 Aligned_cols=183 Identities=13% Similarity=0.027 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHH
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEE-----RNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKR 82 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eE-----RnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~ 82 (252)
+..++++..+.|+|++++++++++....+.++... ++++...+. ..+..-.+..............++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 66789999999999999999999887656665432 222222221 122222232222221111111111100000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc--cCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 025503 83 IKEYRQRVEDELAKICNDILSVIDEHL--IPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (252)
Q Consensus 83 i~~yk~ki~~EL~~~c~eii~lid~~L--ip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a 160 (252)
+....-++-.+.-. -.+.+.++...+ .+...+....+-++-..|..|.-+ ++ .++|...|++|..++
T Consensus 137 ~~~~la~~~~~~g~-~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQ-YKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHTC-HHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccC-hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHHHHHHHh
Confidence 10111111111100 112222222211 122222334444444455555322 11 357999999999998
Q ss_pred hccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 161 ASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 161 ~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.. .+ ..|.-.|...+...-+|...++..+|+....++|+..-
T Consensus 206 ~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 206 NS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred hc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 54 43 23344566777777777888999999999888887654
No 48
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=88.60 E-value=8 Score=30.76 Aligned_cols=165 Identities=9% Similarity=0.004 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~y 86 (252)
-+..+|.+..+.|+|++++.++++++..+|.. .+-...+..+|-. .+....|...+....+..+.. .........-|
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~ 115 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDSRN-ARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHH
Confidence 35677888888999999999999998876553 4444455555543 344555555554332221110 01111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025503 87 RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (252)
Q Consensus 87 k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 166 (252)
.. ..--.+.+..++..+- ....+.. ...+...|..|... |+ .+.|...|++|++.. |
T Consensus 116 ~~------~g~~~~A~~~~~~~~~-~~~~~~~-~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~~-----~ 172 (252)
T 2ho1_A 116 YE------QKRYEEAYQRLLEASQ-DTLYPER-SRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRLN-----R 172 (252)
T ss_dssp HH------TTCHHHHHHHHHHHTT-CTTCTTH-HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC-----S
T ss_pred HH------HhHHHHHHHHHHHHHh-CccCccc-HHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhcC-----c
Confidence 11 1112334444444332 1112222 22223345554322 21 356888888887652 3
Q ss_pred CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 167 t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+| ....+.+..++. .|+.++|+...++++.
T Consensus 173 ~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 173 NQP---SVALEMADLLYK-EREYVPARQYYDLFAQ 203 (252)
T ss_dssp CCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred ccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 332 333445544444 7999999888777654
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=88.52 E-value=20 Score=35.30 Aligned_cols=167 Identities=11% Similarity=0.089 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh-HhhhhhhhCchhHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKRIK 84 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~-~eq~~~~~~~~~~~~~i~ 84 (252)
+-+..++.+..+.|+|++++.+.+++++.+|+. .+=.+-|..+|.. .+..-.|...+.. ++.+.. . ......+-.
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~-~-~~a~~nLg~ 85 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT-F-ADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT-C-HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC-C-HHHHHHHHH
Confidence 345678999999999999999999999988875 3445555666553 2334444444432 221111 0 001111110
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 025503 85 EYRQ--RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAAS 162 (252)
Q Consensus 85 ~yk~--ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 162 (252)
-|.. +. ++=...++..+++ -|.. ..+++ ..|..|+-+ |. .+.|.++|++|+++
T Consensus 86 ~l~~~g~~-~~A~~~~~kAl~l-----~P~~----~~a~~--~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l--- 140 (723)
T 4gyw_A 86 TLKEMQDV-QGALQCYTRAIQI-----NPAF----ADAHS--NLASIHKDS-----GN-----IPEAIASYRTALKL--- 140 (723)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHH-----CTTC----HHHHH--HHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHcCCH-HHHHHHHHHHHHh-----CCCC----HHHHH--HHHHHHHHc-----CC-----HHHHHHHHHHHHHh---
Confidence 0100 00 1111222223322 1221 12221 224444322 11 45789999999865
Q ss_pred cCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhh
Q 025503 163 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEL 207 (252)
Q Consensus 163 ~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 207 (252)
.|.+|- ...|.+.. |..+|+.++|++..+++.+-.-..+
T Consensus 141 --~P~~~~---a~~~L~~~-l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 --KPDFPD---AYCNLAHC-LQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp --CSCCHH---HHHHHHHH-HHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred --CCCChH---HHhhhhhH-HHhcccHHHHHHHHHHHHHhChhHH
Confidence 344543 33444443 4557999999888888877665544
No 50
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=88.38 E-value=11 Score=32.03 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..++.+..+.|+|++++.+++++++.+|.. .+-...+..+|.. .+....|...+..
T Consensus 101 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 101 AWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 35678888899999999999999999887653 4445555555543 3444555555543
No 51
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=88.33 E-value=2.4 Score=36.99 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=51.5
Q ss_pred chHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHH
Q 025503 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLA 196 (252)
Q Consensus 117 eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~ia 196 (252)
....+|+-.+|.++...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3455666678887754322 35799999999998854 33 234444455556665555 79999999999
Q ss_pred HHHHHHHH
Q 025503 197 KQAFDEAI 204 (252)
Q Consensus 197 k~afd~Ai 204 (252)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887654
No 52
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=88.27 E-value=8.7 Score=30.78 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=38.3
Q ss_pred CcccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 1 ~~~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
|+.+-+-+..++.+..+.|+|++++..+.+++..+|.. .+=...+..+|-. .+....+...+.
T Consensus 1 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 1 MQTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 33333456677888888888888888888888776653 4444555555432 344445555543
No 53
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.97 E-value=9.7 Score=30.97 Aligned_cols=201 Identities=13% Similarity=0.077 Sum_probs=103.6
Q ss_pred HhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCc--hhHH
Q 025503 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELT--VEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN--EQNV 80 (252)
Q Consensus 5 re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~--~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~--~~~~ 80 (252)
-+.+..+|...-+.|+|++++..+++++...|.-. .+=...+..+|-. .+....|...+.......+.... ....
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 93 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQIYQIDPRVPQAEY 93 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHCCCCchhHHHHH
Confidence 35677888999999999999999999998876543 4445555555543 45666666666554433221111 1111
Q ss_pred HHHHHH-H--------HHHHHHHHHHHHHHHHHHhhcccCCCCCC-chHhHHh----------hhhcccccccccccCcc
Q 025503 81 KRIKEY-R--------QRVEDELAKICNDILSVIDEHLIPSSTSG-ESTVFYY----------KMKGDYYRYLAEFKGAD 140 (252)
Q Consensus 81 ~~i~~y-k--------~ki~~EL~~~c~eii~lid~~Lip~~~~~-eskvfy~----------KmkgDyyRY~aE~~~~~ 140 (252)
.+..-| . ..=-++-....+.++.. -|..... ....... -..|..|. ..|+
T Consensus 94 ~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~-----~~g~ 163 (261)
T 3qky_A 94 ERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYE-----RREL 163 (261)
T ss_dssp HHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTC
T ss_pred HHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccC
Confidence 111111 1 11122233333333332 2443221 1111110 11233321 1121
Q ss_pred chHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHh---------hCChHHHHHHHHHHHHHHHHhhccCC
Q 025503 141 DRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEI---------LNSPERACHLAKQAFDEAIAELDSLN 211 (252)
Q Consensus 141 ~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi---------~~~~~~A~~iak~afd~Ai~~ld~l~ 211 (252)
-+.|...|+++++. .|.+|.......+.+.-|+.. .|+.++|+...++++.. -+
T Consensus 164 -----~~~A~~~~~~~l~~-----~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~-------~p 226 (261)
T 3qky_A 164 -----YEAAAVTYEAVFDA-----YPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI-------FP 226 (261)
T ss_dssp -----HHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH-------CT
T ss_pred -----HHHHHHHHHHHHHH-----CCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH-------CC
Confidence 35788888888753 456666555556666655543 26667777666665543 12
Q ss_pred c-cchHHHHHHHHHHHhhHhhhh
Q 025503 212 E-ESYKDSTLIMQLLRDNLTLWT 233 (252)
Q Consensus 212 e-e~y~ds~~IlqlLrdNl~~W~ 233 (252)
+ ....++...+..+..-+....
T Consensus 227 ~~~~~~~a~~~l~~~~~~~~~~~ 249 (261)
T 3qky_A 227 DSPLLRTAEELYTRARQRLTELE 249 (261)
T ss_dssp TCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHhh
Confidence 2 235666666666655555443
No 54
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=87.89 E-value=11 Score=31.65 Aligned_cols=58 Identities=9% Similarity=-0.036 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
+.+..++.+..+.|+|++++.+++++++.+|. +.+=...+..+|.. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 44778999999999999999999999987665 34445555555543 234444444443
No 55
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=87.46 E-value=9.7 Score=30.46 Aligned_cols=140 Identities=15% Similarity=0.186 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~y 86 (252)
-+..++.+..+.|+|++++..++++++.+|.. .+=...+..+|...- +. .+. ......++
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~~~~-------~~----------~~~--~~~~~g~~ 100 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYVALY-------RQ----------AED--RERGKGYL 100 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHH-------HT----------CSS--HHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHhh-------hh----------hhh--hcccccCH
Confidence 35578889999999999999999999988764 344444555543320 00 000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025503 87 RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (252)
Q Consensus 87 k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 166 (252)
++=....+.++.+ -|. + ..++ -..|..|.-. |+ .+.|..+|++|+++. .
T Consensus 101 -----~~A~~~~~~al~~-----~P~--~--~~~~--~~lg~~~~~~-----g~-----~~~A~~~~~~al~~~-~---- 149 (217)
T 2pl2_A 101 -----EQALSVLKDAERV-----NPR--Y--APLH--LQRGLVYALL-----GE-----RDKAEASLKQALALE-D---- 149 (217)
T ss_dssp -----HHHHHHHHHHHHH-----CTT--C--HHHH--HHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC-C----
T ss_pred -----HHHHHHHHHHHHh-----Ccc--c--HHHH--HHHHHHHHHc-----CC-----hHHHHHHHHHHHhcc-c----
Confidence 1111112222221 232 1 1222 2345555332 11 357999999999874 1
Q ss_pred CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 167 t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+| ....|.+..+.. +|+.++|+...++++..
T Consensus 150 -~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 150 -TP---EIRSALAELYLS-MGRLDEALAQYAKALEQ 180 (217)
T ss_dssp -CH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred -ch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 22 233566665555 79999999888887763
No 56
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=87.24 E-value=13 Score=31.56 Aligned_cols=189 Identities=11% Similarity=0.024 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhH-H--
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTV---EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN-V-- 80 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~---eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~-~-- 80 (252)
.+..++....+.|+|++++.+++++++..|.-.. .=...+..+|-. .+....|...+.....-....++... .
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567888888999999999999999987655221 122334444432 34444444444322111111111110 0
Q ss_pred --HHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhccccccccc-------ccCc---cchHHHHH
Q 025503 81 --KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAE-------FKGA---DDRKEAAD 147 (252)
Q Consensus 81 --~~i~~yk-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE-------~~~~---~~~~~~~~ 147 (252)
....-|. ..=-++-...+...+.+.... .++...+..+-..|..|...-. ...+ ++-....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 0000010 001123333444444443322 1222222222333444433322 1111 22334467
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 148 ~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.|...|++|+.++.. . +.+|.......|.+..++ -.|+.++|+...++|+.-+-
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 899999999999865 3 234444445555555554 47999999999988877654
No 57
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.08 E-value=14 Score=31.94 Aligned_cols=174 Identities=8% Similarity=0.066 Sum_probs=87.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHH-----HHHHHHHHHhhhhhhhhhHHHHHHh-HhhhhhhhCchhHHHH
Q 025503 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVE-----ERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKR 82 (252)
Q Consensus 9 ~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~e-----ERnLls~ayKn~i~~~R~s~R~l~~-~eq~~~~~~~~~~~~~ 82 (252)
.+++...-..|+|++++.++++.....+....+ =..-+..+|-. .+....|...+.. ++-.....+.......
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH-MKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 356777788899999999999988654333321 11223333322 2333344443322 1111110000100000
Q ss_pred H-----HHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHH
Q 025503 83 I-----KEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (252)
Q Consensus 83 i-----~~yk-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A 156 (252)
+ .-|. ..=-++=...+...+++.... .++......+.-.|..|.-.-. -+.|...|++|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~~a 248 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI-----QNDRFIAISLLNIANSYDRSGD----------DQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
Confidence 0 0000 000122233344444444321 1222222233334555533211 46799999999
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 157 ~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+++++.. .+|.......|.+..++. +|+.++|+...++|+.-
T Consensus 249 l~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 249 AKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 9998753 345554455566665554 79999999988877765
No 58
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=86.40 E-value=9.5 Score=29.27 Aligned_cols=167 Identities=11% Similarity=-0.045 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEY 86 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~y 86 (252)
-+..++.+..+.|+|++++.+++++++..|.. .+-...+..+|-. .+....+...+....+..+.. .........-|
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~ 86 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNYGWFL 86 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHH
Confidence 34577888889999999999999999876653 4444555555542 344555555554333221110 01111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCC
Q 025503 87 RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (252)
Q Consensus 87 k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 166 (252)
.. ...--.+.+..++..+- ...++. ....+...|..|... |+ .+.|...|++|++. .|
T Consensus 87 ~~-----~~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~-----~~ 144 (225)
T 2vq2_A 87 CG-----RLNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA-----QP 144 (225)
T ss_dssp HT-----TTCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----ST
T ss_pred HH-----hcCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----CC
Confidence 11 00001223333333221 111122 122223445555332 21 35688888888765 23
Q ss_pred CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 167 THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 167 t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+| ....+.+..++. .|+.++|+...++++..
T Consensus 145 ~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 145 QFP---PAFKELARTKML-AGQLGDADYYFKKYQSR 176 (225)
T ss_dssp TCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred CCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 443 233444444444 79999999988887764
No 59
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=86.17 E-value=13 Score=30.67 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=87.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHH
Q 025503 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQ 88 (252)
Q Consensus 9 ~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ 88 (252)
..+|.+..+.|+|++++.+++++++.+|. +.+-...+..+|-. .+....|...+.......+.. .........-|..
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~ 200 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTLYYQ 200 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 44578889999999999999999987664 34555555555543 355566666665433322111 0111111111111
Q ss_pred -HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhh--------hcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 025503 89 -RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKM--------KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (252)
Q Consensus 89 -ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 159 (252)
.=-++-...+..++++ -|. ++....+|.++ .|..+. ..|+ .+.|...|+++++.
T Consensus 201 ~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~-----~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 201 LGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDGR-----YTDATSKYESVMKT 263 (359)
T ss_dssp HTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTTC-----HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcCC-----HHHHHHHHHHHHhc
Confidence 0011112222222221 122 22222333222 133221 1111 35788888888765
Q ss_pred HhccCCCCCcchHH-HhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 160 AASELPPTHPIRLG-LALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 160 a~~~L~pt~PirLg-L~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
. |.+|.... +..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3 45655433 44555655555 79999999998888764
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=85.34 E-value=13 Score=29.74 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 148 ~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.|...|++++..... ..|.......+.+..++. .|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 455666655543321 122223455556655554 7999999988877764
No 61
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=85.31 E-value=12 Score=29.40 Aligned_cols=31 Identities=6% Similarity=0.016 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
-+..++.+..+.|+|++++.++++++...+.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 3457888888999999999999999987655
No 62
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=84.34 E-value=16 Score=29.94 Aligned_cols=56 Identities=14% Similarity=-0.061 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC-cchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTH-PIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~-PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+++....-.+.+ |.......+.+..++. .|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 35789999999998754333222 3333455566665544 79999999988888754
No 63
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=84.02 E-value=16 Score=29.82 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ay 50 (252)
+.++.+|....+.|+|++++.++++++...|. +.+-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34556666666667777776666666665544 333333444443
No 64
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=83.77 E-value=14 Score=28.97 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
+.+..++...-+.|+|++++.++.++++.+ -+..=...+..+|-. .+....|...+.
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 62 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 345678888888899999999999988776 334444455555432 233344444443
No 65
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.62 E-value=1.6 Score=33.22 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhccC---CCC-------CcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASEL---PPT-------HPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L---~pt-------~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
-+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 3579999999999864321 233 67777888898888776 7999999999888754
No 66
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=82.98 E-value=6.3 Score=33.07 Aligned_cols=90 Identities=10% Similarity=0.030 Sum_probs=51.7
Q ss_pred HHHHHHhhcccCCCCCCchH--hHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHH-Hhh
Q 025503 100 DILSVIDEHLIPSSTSGEST--VFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLG-LAL 176 (252)
Q Consensus 100 eii~lid~~Lip~~~~~esk--vfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg-L~L 176 (252)
+++.+++..+-.....++.+ +.|++..|.+|.. .++ .+.|...|++|+++.. +..++.... +..
T Consensus 93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 93 EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK-----KVD-----YEYCILELKKLLNQQL---TGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT-----SSC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHH
T ss_pred HHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHc-----ccC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHH
Confidence 34444444332222233322 4455555776522 111 3578999999998542 233343434 345
Q ss_pred hHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 177 NFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 177 N~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
|.+++|+. +|+.++|+..-++|++.+
T Consensus 160 ~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 160 AIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 55555555 799999999999988644
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=82.90 E-value=15 Score=28.65 Aligned_cols=60 Identities=8% Similarity=-0.035 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~ 67 (252)
..+..+|....+.|+|++++.+++++++.+|. +.+-...+..+|- ..+....|...+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEENKE-DAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHHTTCTT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 44567788888999999999999999986654 3444445555543 244555666655443
No 68
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=82.87 E-value=3.7 Score=30.33 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
-+.|.++|++|+++ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 29 ~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 29 YPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 35789999999865 34444 455677776666 7999999988887764
No 69
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=82.74 E-value=25 Score=31.18 Aligned_cols=55 Identities=15% Similarity=0.057 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhc--cCCCCCcc---hHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 148 HSLKAYEAATAAAAS--ELPPTHPI---RLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 148 ~A~~aY~~A~~~a~~--~L~pt~Pi---rLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+...|++|....+. ...|.+|- .++.++..--..|...|+.++|+...++++..
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~ 272 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL 272 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc
Confidence 344455555555433 35566653 24555655556667789999999998888653
No 70
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=81.90 E-value=9.3 Score=26.42 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.+... .++.+|.......+.+..++. .|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5789999999988753 345555545566777776665 7999999888777765
No 71
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=81.45 E-value=6.4 Score=28.23 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
+.|...|++|++++.. . +.+|.......|.+..++. .|+.++|+...++|++-+-
T Consensus 66 ~~A~~~~~~a~~~~~~-~-~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-L-KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-h-CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 5789999999999865 2 2233334455556555554 7999999999999887754
No 72
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=80.67 E-value=13 Score=26.38 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4578888888765 34443 344555555544 789998888888777654
No 73
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=79.36 E-value=18 Score=27.25 Aligned_cols=47 Identities=11% Similarity=0.016 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHhh
Confidence 4688889888865 34443 445566666655 69999998887776643
No 74
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=78.94 E-value=6.3 Score=28.94 Aligned_cols=53 Identities=8% Similarity=-0.003 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|.+.|++|+++... .++.++.+-....|.+..+ .-+|+.++|++.-++|+.
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 5799999999999754 4444444333445555554 558999999987666554
No 75
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=78.57 E-value=4.4 Score=35.85 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhc-cCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAAS-ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~-~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|.++|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|+...+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 5799999999999865 3445678777777888887776 7999999877666543
No 76
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=77.94 E-value=8.9 Score=29.23 Aligned_cols=74 Identities=14% Similarity=0.015 Sum_probs=48.6
Q ss_pred hHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHH
Q 025503 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 197 (252)
Q Consensus 118 skvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak 197 (252)
..+..+-..|..|...-+ .+.|...|++|+++++. .+ .+|...+.+++.-...|--.|+.++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLAS-LP-EDPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHH-cC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 334444455666654422 35799999999999863 43 3554555554444445555899999999999
Q ss_pred HHHHHH
Q 025503 198 QAFDEA 203 (252)
Q Consensus 198 ~afd~A 203 (252)
+|+.-+
T Consensus 132 ~al~~~ 137 (203)
T 3gw4_A 132 KSLVYA 137 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 77
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=77.53 E-value=7.7 Score=26.47 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5789999999865 34454 345677766655 7999999888777654
No 78
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=76.84 E-value=28 Score=28.08 Aligned_cols=180 Identities=13% Similarity=0.094 Sum_probs=90.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhh-hh--hCch
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLD-------VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EA--KGNE 77 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~-------~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~-~~--~~~~ 77 (252)
+..++.+....|+|++++.++++++... .+....-...+..+|- ..+....|...+....... .. ....
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 150 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHP 150 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 4567888888999999999999988652 1112222333344332 2344455555554322211 10 0011
Q ss_pred hHHH----HHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHH
Q 025503 78 QNVK----RIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKA 152 (252)
Q Consensus 78 ~~~~----~i~~y-k~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~a 152 (252)
.... +..-| ...=-++-....+..+.+.....-+. ....+..+-..|..|...-. .+.|...
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~~ 217 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAETL 217 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHHH
Confidence 1110 00000 00001233334444555444322111 12223333334555533211 3578888
Q ss_pred HHHHHHHHhc-----------------------------------------cCCCCCcchHHHhhhHHHHHHHhhCChHH
Q 025503 153 YEAATAAAAS-----------------------------------------ELPPTHPIRLGLALNFSVFYYEILNSPER 191 (252)
Q Consensus 153 Y~~A~~~a~~-----------------------------------------~L~pt~PirLgL~LN~SVF~yEi~~~~~~ 191 (252)
|++|++++.. .....+|.......+.+..|.. .|+.++
T Consensus 218 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~ 296 (311)
T 3nf1_A 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEA 296 (311)
T ss_dssp HHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHH
Confidence 8888887532 1122456666666667666655 799999
Q ss_pred HHHHHHHHHHH
Q 025503 192 ACHLAKQAFDE 202 (252)
Q Consensus 192 A~~iak~afd~ 202 (252)
|+...++|+.-
T Consensus 297 A~~~~~~al~l 307 (311)
T 3nf1_A 297 AETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998888764
No 79
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=76.70 E-value=11 Score=29.05 Aligned_cols=86 Identities=21% Similarity=0.081 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhH--h--hhhhhhCchhHHHHHHHHHHHHH
Q 025503 19 ERYDEMVEAMKKVA---KLDVELTVEERNLVSVGYKNVIGARRASWRILSSI--E--QKEEAKGNEQNVKRIKEYRQRVE 91 (252)
Q Consensus 19 ery~dm~~~mk~~i---~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~--e--q~~~~~~~~~~~~~i~~yk~ki~ 91 (252)
+|.|..++.+|.-+ -+|++||.|-|.=|.--.|...-.-|-|.|-+..- . .+....+ .+-++-....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 56777788887654 35899999999999988888888888888877431 1 0110001 01123344556
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 025503 92 DELAKICNDILSVIDEHL 109 (252)
Q Consensus 92 ~EL~~~c~eii~lid~~L 109 (252)
++|..+.+..|.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666543
No 80
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=76.13 E-value=10 Score=24.75 Aligned_cols=48 Identities=19% Similarity=0.298 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 35788999999865 24443 345566666655 79999999888877653
No 81
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=75.91 E-value=9 Score=27.21 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5789999999865 3444 4556677776666 79999999988888765
No 82
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=75.87 E-value=35 Score=28.71 Aligned_cols=52 Identities=8% Similarity=-0.031 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAF 200 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~af 200 (252)
-+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 35799999999999864 222 22 333333334445556799999988766654
No 83
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=75.46 E-value=13 Score=27.98 Aligned_cols=47 Identities=11% Similarity=0.115 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4566666666654 2333 3344555555544 67887777766666543
No 84
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=75.38 E-value=28 Score=27.41 Aligned_cols=61 Identities=15% Similarity=-0.005 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQ 69 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq 69 (252)
-+..+|.+..+.|+|++++.+++++++.++. +..-...+..+|-. .+....|.+.+.....
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence 3557788899999999999999999987765 34444555555543 4555666666654433
No 85
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=75.35 E-value=11 Score=31.57 Aligned_cols=188 Identities=14% Similarity=0.035 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-----hhhhhhhhhHHHHHHh-HhhhhhhhCchhHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY-----KNVIGARRASWRILSS-IEQKEEAKGNEQNV 80 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ay-----Kn~i~~~R~s~R~l~~-~eq~~~~~~~~~~~ 80 (252)
.+...+...-..|+|+++++++++.++..+. ..+....+..-+ -...+..-.|...+.. ++............
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 155 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 3455666777789999999999998876555 333322221111 1122233455554432 22111111010001
Q ss_pred ----HHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHH
Q 025503 81 ----KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEA 155 (252)
Q Consensus 81 ----~~i~~yk-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~ 155 (252)
..-.-|. ..=-++-....+..+.+.+. .|. ++...+..+-..|..|...-+ -+.|...|++
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~~~k 221 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHHHHH
Confidence 1111111 11112344455556655543 232 111121222234665542211 3579999999
Q ss_pred HHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHH-HHHHHHHHHHHHhhccCCccchH
Q 025503 156 ATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERAC-HLAKQAFDEAIAELDSLNEESYK 216 (252)
Q Consensus 156 A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~-~iak~afd~Ai~~ld~l~ee~y~ 216 (252)
|++++.. ..++..++.+++.--..|.-+|+.++|+ ...++| +.-.+.++...++
T Consensus 222 al~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A----l~~~~~~~~~~~~ 276 (293)
T 2qfc_A 222 AIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA----SFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH----HHHHHHTTCHHHH
T ss_pred HHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH----HHHHHHhCcHhhH
Confidence 9999853 2344456655555555566689999994 434444 4444455555553
No 86
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=73.99 E-value=12 Score=25.07 Aligned_cols=47 Identities=19% Similarity=0.165 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+++. |.+ .....+.+..++. .|+.++|+...++++..
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 57888999988652 333 3455677776666 69999999887777643
No 87
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=73.97 E-value=34 Score=27.75 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
-+..++.+..+.|+|++++.+++++++.+|.
T Consensus 57 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 87 (327)
T 3cv0_A 57 AWRSLGLTQAENEKDGLAIIALNHARMLDPK 87 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcC
Confidence 3457788889999999999999999987654
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=73.54 E-value=39 Score=28.17 Aligned_cols=52 Identities=10% Similarity=-0.033 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchH-HHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRL-GLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirL-gL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|..+|++|+++.... .+|... ....|.+.++.. +|+.++|+...+++.+
T Consensus 134 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 467999999999997531 123333 345566777666 7999999987776654
No 89
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=73.49 E-value=15 Score=25.70 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLR 226 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLr 226 (252)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+...++++... -+......+...+..++
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY------PGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHH
Confidence 5788899888754 46776665666677766665 799999998877766541 11223444555555555
Q ss_pred hhH
Q 025503 227 DNL 229 (252)
Q Consensus 227 dNl 229 (252)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 90
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=72.55 E-value=21 Score=24.67 Aligned_cols=57 Identities=7% Similarity=0.061 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
-...++.+..+.|+|++++.+++++++.+|.... =...+..+|.. .+..-.|...+.
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4567889999999999999999999998887544 45556666643 344444444443
No 91
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=72.29 E-value=31 Score=26.57 Aligned_cols=31 Identities=6% Similarity=-0.051 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
.+..++....+.|+|++++.++++++...+.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 3556788888899999999999999876443
No 92
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=72.22 E-value=21 Score=24.63 Aligned_cols=73 Identities=18% Similarity=0.142 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLL 225 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlL 225 (252)
.+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|+.-+-.. ....-...+.++|
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l 87 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAK 87 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHH
Confidence 35788999999865 344443 45556665544 899999999998888765332 1223344555555
Q ss_pred HhhHhhhh
Q 025503 226 RDNLTLWT 233 (252)
Q Consensus 226 rdNl~~W~ 233 (252)
+..=..|.
T Consensus 88 ~~~~~~~~ 95 (100)
T 3ma5_A 88 LKAEGLEH 95 (100)
T ss_dssp HHHHTTC-
T ss_pred HHcccccc
Confidence 55444443
No 93
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=72.14 E-value=15 Score=24.76 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 4688888888754 3445421 45666776665 79999998887777653
No 94
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=71.82 E-value=44 Score=28.06 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchH-HHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRL-GLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirL-gL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
.+.|...|++|+++... . .+|... ....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 45799999999999864 2 233333 355566776655 799999999888887654
No 95
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.46 E-value=10 Score=27.11 Aligned_cols=50 Identities=24% Similarity=0.197 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|++ +.|.+|....+..+.+..++. .|+.++|+...++++..
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 457777777763 445555556666777766655 68888888887777653
No 96
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=71.08 E-value=27 Score=25.42 Aligned_cols=57 Identities=19% Similarity=0.147 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
+..++.+..+.|+|++++..+++++...|.- ..-...+..+|- ..+....|...+..
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADAFD-VDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-hHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 4457888888999999999999988765542 333334444443 23444455555443
No 97
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=70.52 E-value=49 Score=28.11 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L 38 (252)
+..++.+..+.|+|++++.++++++..+|+.
T Consensus 70 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 70 YSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 4556666667777777777777776665543
No 98
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=69.90 E-value=26 Score=25.63 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5799999999865 456654 34566666555 799999998888777654
No 99
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=69.79 E-value=15 Score=25.98 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+++ .|.+| .+..|.+..++. +|+.++|+...++|+.-
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 5788999999865 34444 455666666665 79999999988888753
No 100
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=69.37 E-value=26 Score=24.38 Aligned_cols=58 Identities=12% Similarity=0.193 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..++.+..+.|+|++++.++++++..+|.. .+=...+..+|.. .+....|...+..
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 45678888999999999999999999887754 4445566666654 3555556555544
No 101
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=69.10 E-value=15 Score=26.84 Aligned_cols=47 Identities=6% Similarity=0.000 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35789999999865 34443 345566666655 7999999887777664
No 102
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=68.66 E-value=17 Score=29.06 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHH-----HhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLG-----LALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLg-----L~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
-+.|..+|++|+++.-. .|+..++.+. ...|-+.-+.. +|+.++|+.-+.+|+.-
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 45799999999998744 3333333333 66777766655 79999999988887663
No 103
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=68.03 E-value=16 Score=27.41 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|..+|++|+.+ .|.||. ..+|.++.++. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5799999999865 455653 44666776665 79999998877766554
No 104
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=67.09 E-value=19 Score=24.92 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 5688899998865 23343 345566665554 79999999888877654
No 105
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=66.78 E-value=37 Score=25.23 Aligned_cols=29 Identities=7% Similarity=0.083 Sum_probs=15.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
+..++.+..+.|+|++++.++.++++.+|
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34445555555555555555555555444
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=66.20 E-value=61 Score=27.52 Aligned_cols=43 Identities=16% Similarity=0.074 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ay 50 (252)
-+..++.+..+.|++++++.+.+.++..+|. +.+-...+..+|
T Consensus 35 ~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~-~~~~~~~lg~~~ 77 (388)
T 1w3b_A 35 VLLLLSSIHFQCRRLDRSAHFSTLAIKQNPL-LAEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHH
Confidence 4566788888899999999999888877665 344455555554
No 107
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=65.94 E-value=21 Score=24.43 Aligned_cols=50 Identities=24% Similarity=0.354 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.+.|...|++|+... |.+| ....+.+..++. .|+.++|+...++++...-
T Consensus 20 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKELD-----PTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-----CccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 357888999888652 3343 345566666655 7999999999988887653
No 108
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=65.84 E-value=7.1 Score=27.86 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
-+++++.++.+.|+|++++.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4567788888888888888888888877666
No 109
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=65.47 E-value=75 Score=28.30 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhh-hhhHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGA-RRASWRILS 65 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~-~R~s~R~l~ 65 (252)
+-+.+++.+..+.|+|++++....+++..+|.. .+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 345677888888999999999999999988764 33344445555433 32 455555554
No 110
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=65.31 E-value=18 Score=27.24 Aligned_cols=47 Identities=21% Similarity=0.312 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
-+.|.++|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 35789999999865 34554 334444554444 7999998888777654
No 111
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=64.67 E-value=26 Score=24.30 Aligned_cols=50 Identities=16% Similarity=-0.034 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.+.|...|++|+.+ .|.++ ....+.+..+.. .|+.++|+...++|+...-
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 35789999999865 34443 334566665554 7999999998888876543
No 112
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=63.64 E-value=38 Score=24.29 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
+....++....+.|+|++++..+++++..+|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~ 49 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE 49 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 35667788888889999999999888876655
No 113
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=63.42 E-value=56 Score=26.18 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHh--------------hhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLA--------------LNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~--------------LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|+++++. .|.+|...... ++.+..|+. .|+.++|+...++++..
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Confidence 56789999988754 35565544333 666777666 79999999988887653
No 114
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=62.24 E-value=23 Score=23.70 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+++ .|.+| ....+.+..++ -+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5688888888765 34443 34556666554 47999999887776653
No 115
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=61.64 E-value=29 Score=23.63 Aligned_cols=46 Identities=17% Similarity=0.167 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHh
Confidence 3456666666543 12222 233344444433 5667776666666654
No 116
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=61.53 E-value=30 Score=23.07 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35688888888764 34443 344555555554 79999999988888764
No 117
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=61.33 E-value=23 Score=29.66 Aligned_cols=54 Identities=7% Similarity=-0.065 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
+.|.++|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5799999999999754 32 555666666666666677899999999888887643
No 118
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=61.22 E-value=43 Score=26.46 Aligned_cols=48 Identities=17% Similarity=0.123 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 35688888888765 33443 333444444444 79999999888887763
No 119
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=61.15 E-value=30 Score=23.55 Aligned_cols=47 Identities=17% Similarity=0.123 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALSS-LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 5788889988865 34443 334555555544 79999999888877654
No 120
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=59.55 E-value=29 Score=25.10 Aligned_cols=47 Identities=9% Similarity=-0.172 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 5788889888865 23443 345566665554 79999999888887653
No 121
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=59.42 E-value=25 Score=26.33 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
...+|++..+.|+|++++++++++++.+|.
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~ 63 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQER 63 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999988775
No 122
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=59.33 E-value=28 Score=25.99 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
++|.+.|++|+++ .|.|| ....+.+..|+ -+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788999999865 35554 33445555544 47999999887777764
No 123
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.69 E-value=32 Score=24.31 Aligned_cols=47 Identities=11% Similarity=-0.060 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 5788889888865 34443 344566665555 79999998887777653
No 124
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=58.50 E-value=24 Score=27.12 Aligned_cols=48 Identities=13% Similarity=0.075 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.-
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35799999999865 355653 45677776655 89999999877776654
No 125
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=58.36 E-value=1.1e+02 Score=27.72 Aligned_cols=163 Identities=12% Similarity=0.033 Sum_probs=78.6
Q ss_pred HHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh-hhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHH
Q 025503 16 EQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGAR-RASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDEL 94 (252)
Q Consensus 16 eq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~-R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~EL 94 (252)
+..+++++++..+.++... .+-+.+-...+..+|-. .+.. ..|...+....+..+.. ......+-.-|...
T Consensus 79 ~~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~----- 150 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK----- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-----
Confidence 3345577778888776543 34556666666666654 4555 66666665433222111 01111111111110
Q ss_pred HHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHH
Q 025503 95 AKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGL 174 (252)
Q Consensus 95 ~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL 174 (252)
.--.+.+...+..|--. +.. ..+...|..|+.+.. ....++..-.+.|...|++|+++ .|.+|. .
T Consensus 151 -g~~~~A~~~~~~al~~~---p~~--~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~ 215 (474)
T 4abn_A 151 -GDVTSAHTCFSGALTHC---KNK--VSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---S 215 (474)
T ss_dssp -TCHHHHHHHHHHHHTTC---CCH--HHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---H
T ss_pred -CCHHHHHHHHHHHHhhC---CCH--HHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---H
Confidence 11122333333332111 222 334455777765522 11222333457899999999875 345543 3
Q ss_pred hhhHHHHHHHh---h----CChHHHHHHHHHHHH
Q 025503 175 ALNFSVFYYEI---L----NSPERACHLAKQAFD 201 (252)
Q Consensus 175 ~LN~SVF~yEi---~----~~~~~A~~iak~afd 201 (252)
..|.+..|... . |+.++|+...++|+.
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 34444444332 1 667777776666654
No 126
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=58.15 E-value=9.1 Score=34.11 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASE--------LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~--------L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+++.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 57888899998865431 111567778888898888875 7999999998888865
No 127
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=57.81 E-value=37 Score=22.77 Aligned_cols=46 Identities=20% Similarity=0.347 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4677777777654 23332 233444444444 6888888877777654
No 128
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=56.83 E-value=1.1e+02 Score=27.25 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhh
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIG 55 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~ 55 (252)
+..++.+..+.|+|++++.++.++++.+|. +..=.+-+..+|....+
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcC
Confidence 345666666777777777777777766655 33444445555554333
No 129
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=56.78 E-value=89 Score=26.32 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|....+++++.
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 56889999999998764444456666666667777766 59999998888887754
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=56.17 E-value=35 Score=24.63 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+.+. |.+ .....+.+..++. .|+.++|+...++++..
T Consensus 29 ~~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 29 YENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 357888999988652 333 3445566665555 79999999988887654
No 131
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=56.10 E-value=42 Score=22.52 Aligned_cols=48 Identities=19% Similarity=0.298 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++++.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 59 ~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 59 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 35688888888765 23443 344566666655 79999999887777654
No 132
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=56.02 E-value=27 Score=29.49 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq----~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
|+||.|-|.=|....|...-.-|-|.|-+..--. +.+..+ .+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888887753111 111001 01133445666777777777777777643
No 133
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=55.28 E-value=25 Score=20.12 Aligned_cols=26 Identities=27% Similarity=0.676 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025503 81 KRIKEYRQRVEDELAKICNDILSVID 106 (252)
Q Consensus 81 ~~i~~yk~ki~~EL~~~c~eii~lid 106 (252)
+.++.|+.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999998877764
No 134
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=55.25 E-value=33 Score=26.40 Aligned_cols=49 Identities=16% Similarity=0.228 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc-------------chHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHP-------------IRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~P-------------irLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 46888888887654 2333 123566677776665 7999999988888765
No 135
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=54.88 E-value=76 Score=24.99 Aligned_cols=63 Identities=5% Similarity=-0.042 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhh
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVE--LTVEERNLVSVGYKNVIGARRASWRILSSIEQ 69 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~--L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq 69 (252)
+.+..+|...-+.|+|++++..+++++...|. ...+-...+..+|-. .+....|...+....+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 45667888899999999999999999987654 334445555555532 4555666666655443
No 136
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=54.26 E-value=36 Score=26.09 Aligned_cols=47 Identities=15% Similarity=0.131 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|...|++|+.+. |.+| ....|.+..++. +|+.++|+...++|+.
T Consensus 53 ~~~A~~~~~~al~~~-----~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 53 MTEAEKAFTRSINRD-----KHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----ccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 357899999998762 3443 455667766666 7999999998888877
No 137
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=54.19 E-value=59 Score=23.53 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
+..+|....+.|+|++++.++++++..+|
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p 49 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDH 49 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCC
Confidence 34455555556666666666666665544
No 138
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=53.78 E-value=35 Score=26.81 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=27.1
Q ss_pred HhhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 5 re~~~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
-+.++..+...-+.|+|++++.++.+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35678888888899999999999999987654
No 139
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=53.62 E-value=78 Score=24.70 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=24.1
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 11 LARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 11 ~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
++.+..+.|+|++++.+++++++.+|.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~ 86 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN 86 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 788888999999999999999988775
No 140
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=52.88 E-value=1e+02 Score=25.84 Aligned_cols=108 Identities=26% Similarity=0.373 Sum_probs=60.5
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHH-
Q 025503 11 LARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQR- 89 (252)
Q Consensus 11 ~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~k- 89 (252)
.|+|.+....|-.||+-+|.-.. +..|..|.=.-||=.+.. ++.+. + . ...|++-..|
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdE----------LEK~~--K-d---SeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDN----------LEKKN--K-D---QERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH----------HHHHT--C-C---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHH----------HHhcc--c-h---HHHHHHhHHHh
Confidence 46777777777777777754221 133444554555543332 22211 1 1 2233333333
Q ss_pred --HHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 025503 90 --VEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAAS 162 (252)
Q Consensus 90 --i~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 162 (252)
-+.--..+|-++|+-.+ ++-|.|+|.++|..+. +=...--|-+|++.|.+
T Consensus 159 ssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 34455667777777665 4458889999886543 22344567888888754
No 141
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=52.32 E-value=71 Score=23.86 Aligned_cols=74 Identities=9% Similarity=-0.116 Sum_probs=49.0
Q ss_pred hHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHH
Q 025503 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 197 (252)
Q Consensus 118 skvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak 197 (252)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.+++.-...|.-.|+.++|+...+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 344444455665544322 45799999999999864 2 3555556555555555666899999998888
Q ss_pred HHHHHHH
Q 025503 198 QAFDEAI 204 (252)
Q Consensus 198 ~afd~Ai 204 (252)
+|++-+-
T Consensus 172 ~al~~~~ 178 (203)
T 3gw4_A 172 RARDIFA 178 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777654
No 142
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=51.35 E-value=29 Score=27.75 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHh--ccCCCCCcchH-HHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAA--SELPPTHPIRL-GLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQ 223 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~--~~L~pt~PirL-gL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~Ilq 223 (252)
+.|..+|.+|+++-. -.+.|.++--+ .-..|-++-+. -+|+.++|+.--++|+.-.=. +...+++...+.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~p~-----d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVEMIEE-----RKGETPGKERMME 147 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH-----CCSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHhcCCC-----cHHHHHHHHHHHH
Confidence 468899999998732 24566554211 11134444443 389999998876666654321 2233555666666
Q ss_pred HHHhhHh
Q 025503 224 LLRDNLT 230 (252)
Q Consensus 224 lLrdNl~ 230 (252)
.+.+.+.
T Consensus 148 ~~~~~~~ 154 (159)
T 2hr2_A 148 VAIDRIA 154 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555443
No 143
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=50.92 E-value=50 Score=21.71 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=15.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 9 VYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 9 ~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
..++.+..+.|+|++++.+++++++..+
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 3445555555666666666666655544
No 144
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=50.82 E-value=25 Score=32.01 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhccCCC--------CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPP--------THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~p--------t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+++... .+. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5788899999877532 110 235667888888888877 7999999988888754
No 145
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=50.51 E-value=62 Score=22.66 Aligned_cols=54 Identities=15% Similarity=0.028 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
..|..-|++|++.....-. ..+.+-.+..++++-+| -+|+.++|+...++|+.-
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhc
Confidence 4688899999887643211 12334445555555555 589999999998888753
No 146
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=50.16 E-value=40 Score=27.79 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
|+||.|-|.=|..-.|...-.-|.+.|.+..--.+.-.+ -.+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKE-DQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888774311100000 0000011234445666777777777777666543
No 147
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=50.14 E-value=82 Score=23.93 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYK 51 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayK 51 (252)
+-+..++....+.|+|++++.++++++..+|. +.+=...|..+|-
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQ 81 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 34556677777778888888888777776654 3444444555543
No 148
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=49.63 E-value=34 Score=31.41 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHH
Q 025503 148 HSLKAYEAATAA 159 (252)
Q Consensus 148 ~A~~aY~~A~~~ 159 (252)
.|.+.|++|+++
T Consensus 24 ~A~~~~~~Al~~ 35 (477)
T 1wao_1 24 NAIKFYSQAIEL 35 (477)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 455555555443
No 149
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=49.54 E-value=52 Score=23.80 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
+.|.+.|++++.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhc
Confidence 4678888888765 23343 344555555544 79999999998887764
No 150
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=48.43 E-value=1.6e+02 Score=26.83 Aligned_cols=31 Identities=13% Similarity=-0.050 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
-+..+|.+..+.|+|++++.+++++++.+|.
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3556788888889999999999998877664
No 151
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=48.14 E-value=22 Score=32.50 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhh
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEL 207 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 207 (252)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45788888888732 23 2457888888999999999999999999999998753
No 152
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=48.10 E-value=42 Score=27.66 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq----~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
|+||.|-|.=|..-.|...-.-|.+.|.+..--. +....+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887743111 110001 01234445566667777666666666543
No 153
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=47.98 E-value=86 Score=23.55 Aligned_cols=164 Identities=9% Similarity=-0.040 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCch-hHHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNE-QNVKRIKE 85 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~-~~~~~i~~ 85 (252)
-+..++.+..+.|+|++++.++.+++...|. +.+-...+..+|-...+....+...+....+........ .......-
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 3456788888999999999999999987665 344445555555443255666666665544311000000 01111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccC
Q 025503 86 YRQ-RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASEL 164 (252)
Q Consensus 86 yk~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 164 (252)
|.. .=-++-...+..++.+ -|. + . ..+...|..|.- .|+ .+.|...|+++++..
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~-----~~~--~--~--~~~~~la~~~~~-----~~~-----~~~A~~~~~~~~~~~---- 177 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAA-----QPQ--F--P--PAFKELARTKML-----AGQ-----LGDADYYFKKYQSRV---- 177 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----STT--C--H--HHHHHHHHHHHH-----HTC-----HHHHHHHHHHHHHHH----
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCC--C--c--hHHHHHHHHHHH-----cCC-----HHHHHHHHHHHHHhC----
Confidence 110 0011222223333321 122 1 1 112223443322 111 356888898888653
Q ss_pred CC-CCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 165 PP-THPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 165 ~p-t~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
| .+|.. ++....+|...|+.++|....+.+..
T Consensus 178 -~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 178 -EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp -CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3 45443 33445566778999998877766543
No 154
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=47.50 E-value=68 Score=22.28 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..++.+..+.|+|++++.+++++++.+|+- .+=...+..+|-. .+....|...+..
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 35678888889999999999999999887775 4555556666544 3555566665543
No 155
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=46.75 E-value=32 Score=28.72 Aligned_cols=50 Identities=20% Similarity=0.135 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhc--cCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 151 KAYEAATAAAAS--ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 151 ~aY~~A~~~a~~--~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
.-|++|....+. .+.|.+ .....+.+..++. +|+.++|+...++|+.-.-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQS---VKAHFFLGQCQLE-MESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCc
Confidence 345666665543 234444 3445555555544 7888888888888776543
No 156
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=46.73 E-value=59 Score=24.14 Aligned_cols=46 Identities=9% Similarity=-0.016 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.+ .|.+|.. ..+.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~~-----~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCVL-----DHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 4678888887754 4556533 3456665554 7999999998888764
No 157
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=46.58 E-value=42 Score=27.65 Aligned_cols=73 Identities=18% Similarity=0.200 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
|+||.|-|.=|..-.|...-.-|.+.|.+..--.+.-.+ -.+...+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKK-LAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874311110000 0000011234445667777777777777776543
No 158
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=46.57 E-value=69 Score=26.32 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=46.6
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 35 DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 35 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
-|+||.|-|.=|..-.|...-.-|.+.|.+..--.+.-.+.. ++-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388999999999999999888888888887431111111100 02234456677777777777777777643
No 159
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=46.39 E-value=29 Score=27.74 Aligned_cols=93 Identities=19% Similarity=0.309 Sum_probs=51.6
Q ss_pred cccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCc---chHHHhhhHHHHH----HHhhCChHHHHHHHHHH
Q 025503 127 GDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHP---IRLGLALNFSVFY----YEILNSPERACHLAKQA 199 (252)
Q Consensus 127 gDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~P---irLgL~LN~SVF~----yEi~~~~~~A~~iak~a 199 (252)
|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.|+.++|+..
T Consensus 43 G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~---- 113 (158)
T 1zu2_A 43 GGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQF---- 113 (158)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----
T ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHH----
Confidence 555555556666666667789999999999866 34454 2355544322121 1112466677664
Q ss_pred HHHHHHhhccCCccchHHHHHHHHHHHhhHhhhh
Q 025503 200 FDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 233 (252)
Q Consensus 200 fd~Ai~~ld~l~ee~y~ds~~IlqlLrdNl~~W~ 233 (252)
|+.|++. +. +...|.. -+++...+-.+|.
T Consensus 114 ~~kAl~l-~P-~~~~y~~---al~~~~ka~el~~ 142 (158)
T 1zu2_A 114 FQQAVDE-QP-DNTHYLK---SLEMTAKAPQLHA 142 (158)
T ss_dssp HHHHHHH-CT-TCHHHHH---HHHHHHTHHHHHH
T ss_pred HHHHHHh-CC-CCHHHHH---HHHHHHhCHhccC
Confidence 4444422 21 1223444 4666666666665
No 160
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=46.13 E-value=45 Score=27.49 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq----~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~L 109 (252)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +....+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887743111 110001 01134445566677777766666666543
No 161
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=44.91 E-value=90 Score=22.90 Aligned_cols=71 Identities=6% Similarity=-0.086 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLR 226 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqlLr 226 (252)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4688888888866 34454 445556665555 79999998887776654 2332224455556666
Q ss_pred hhHhhhhc
Q 025503 227 DNLTLWTS 234 (252)
Q Consensus 227 dNl~~W~~ 234 (252)
.-+.....
T Consensus 143 ~~~~~~~~ 150 (162)
T 3rkv_A 143 ERRAEKKA 150 (162)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 55555443
No 162
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=44.81 E-value=48 Score=27.29 Aligned_cols=68 Identities=22% Similarity=0.209 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHh----hhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025503 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIE----QKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEH 108 (252)
Q Consensus 36 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~e----q~~~~~~~~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~ 108 (252)
|+||.|-|.=|..-.|...-.-|.+.|.+..-- .+....+ .+-++-.++.++++..+.+..+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999988888888888774311 1110001 0113344556666666666666666654
No 163
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=44.33 E-value=60 Score=20.73 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..++.+..+.|+|++++.++++.+..+|.- .+=...+..+|-. .+....|...+..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 34567888889999999999999999876653 4444455555543 4555666666654
No 164
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=44.00 E-value=84 Score=22.33 Aligned_cols=57 Identities=16% Similarity=0.085 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 65 (252)
-...++.+..+.|++++++.+++++++.+|.. .+=...|..+|.. .+....|...+.
T Consensus 53 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 109 (121)
T 1hxi_A 53 AWRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSHTN-EHNANAALASLR 109 (121)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35678889999999999999999999988764 3445555555543 244444444443
No 165
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=43.93 E-value=79 Score=21.99 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++|+...-
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHCh
Confidence 3567777777754 23333 344555555554 6888888888888776654
No 166
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=43.87 E-value=95 Score=22.90 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=27.9
Q ss_pred HHHHHHHHh---CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh
Q 025503 10 YLARLAEQA---ERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGAR 57 (252)
Q Consensus 10 ~~Aklaeq~---ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~ 57 (252)
+.-+-|+++ |||||+|++-++.+ .+|+.|+|.+-++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa-----------~yL~eAmkltqs~q 56 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT-----------TYLSEAMKLTESEQ 56 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-----------HHHHHHHTTCCCHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH-----------HHHHHHHHhhccHH
Confidence 444556555 99999999999987 57888888874443
No 167
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=42.71 E-value=84 Score=21.93 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=47.8
Q ss_pred CcccHhhHHHHHHHHHHhCCHHHHHHHHHHHHhcC-----CCCC-HHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD-----VELT-VEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 1 ~~~~re~~~~~Aklaeq~ery~dm~~~mk~~i~~~-----~~L~-~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
|+|+-+++..+++.+-+-|.|+.++..+++.+... +..+ .+=...|..+|-. .+....|+..+..
T Consensus 1 ~~Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~ 71 (104)
T 2v5f_A 1 MFLTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKK 71 (104)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHH
Confidence 67888999999999999999999999999988641 1233 4445677777764 4556667776654
No 168
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=42.64 E-value=53 Score=27.79 Aligned_cols=53 Identities=19% Similarity=0.050 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
+.|...+++|+.. .|+.+|...+.+++.--..|-..|+.++|....++|..-+
T Consensus 31 ~~A~~~~~~al~~----~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 83 (373)
T 1hz4_A 31 DEAERLAKLALEE----LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 83 (373)
T ss_dssp HHHHHHHHHHHHT----CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3456666666543 2344444334344333334444677777776666665543
No 169
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=42.64 E-value=37 Score=25.43 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHhhhh
Q 025503 19 ERYDEMVEAMKKVAKLD-VELTVEERNLVSVGYKNVI 54 (252)
Q Consensus 19 ery~dm~~~mk~~i~~~-~~L~~eERnLls~ayKn~i 54 (252)
++|+.++..++.+-..+ ..++.+++-.|=.-||...
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888898888765433 2689999999988899764
No 170
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=42.21 E-value=58 Score=24.51 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L 38 (252)
-+..++.+..+.|+|++++.++.+++..+|..
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 34567777777888888888888887776654
No 171
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=42.15 E-value=40 Score=22.43 Aligned_cols=29 Identities=3% Similarity=0.053 Sum_probs=21.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 025503 9 VYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 9 ~~~Aklaeq~ery~dm~~~mk~~i~~~~~ 37 (252)
+.+|....+.|+|++++..++++++.+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 45677777788888888888888776654
No 172
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=41.71 E-value=53 Score=25.07 Aligned_cols=55 Identities=13% Similarity=0.044 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhccC--------CCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASEL--------PPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L--------~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+.
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3578899999987542110 00334555666777777766 7999999887766653
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=40.79 E-value=38 Score=22.69 Aligned_cols=30 Identities=10% Similarity=0.038 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
.+..++......|+|++++...++++..+|
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 445566666666777777777766665544
No 174
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=40.76 E-value=90 Score=24.54 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 467778887764 346677655555555555554 7999999987777664
No 175
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=38.64 E-value=3.5e+02 Score=29.57 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=20.4
Q ss_pred hHHHHHHHhhCChHHHHHHHHHHH
Q 025503 177 NFSVFYYEILNSPERACHLAKQAF 200 (252)
Q Consensus 177 N~SVF~yEi~~~~~~A~~iak~af 200 (252)
.-.|-+|+-.|..++||.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355778899999999999999883
No 176
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=38.58 E-value=1.1e+02 Score=22.17 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhh---CChHHHHHHHHHHHHHHHHhhccC---CccchHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEIL---NSPERACHLAKQAFDEAIAELDSL---NEESYKDSTL 220 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~---~~~~~A~~iak~afd~Ai~~ld~l---~ee~y~ds~~ 220 (252)
..-..+|++|+..... +|+. |=. |++++|+++-++++.+-...+.-- ..++|..+..
T Consensus 7 ~~ik~~h~~AF~~Is~------------aL~~-----DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~ 69 (89)
T 3eab_A 7 ERVRVFHKQAFEYISI------------ALRI-----DEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARR 69 (89)
T ss_dssp HHHHHHHHHHHHHHHH------------HHHH-----HHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------------HHHh-----hhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHH
Confidence 3456778888776544 3332 334 999999999998887766655421 3356999999
Q ss_pred HHHHHHhhHhh
Q 025503 221 IMQLLRDNLTL 231 (252)
Q Consensus 221 IlqlLrdNl~~ 231 (252)
+-+-|+.||..
T Consensus 70 LQ~KM~~nL~~ 80 (89)
T 3eab_A 70 LQAKMMTNLVM 80 (89)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 177
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=36.78 E-value=70 Score=23.73 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCCh--HHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSP--ERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~--~~A~~iak~afd~ 202 (252)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...++++..
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 357899999998764 3443 34566677756667887 9998888777653
No 178
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=35.97 E-value=1e+02 Score=21.05 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELT--VEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~--~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
+..+|....+.|+|++++..+++++...|.-. .+-...+..+|-. .+....|...+..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~ 64 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRD 64 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 44566666667777777777777766554433 2333444444332 3444444444433
No 179
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=35.48 E-value=69 Score=31.45 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35799999999876 3444 3455677776666 7999999998888865
No 180
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=35.29 E-value=3e+02 Score=26.14 Aligned_cols=125 Identities=8% Similarity=-0.025 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHH
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYR 87 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk 87 (252)
+..+|.+..+.|+|++++..+.++++.+|. +.+-...+..+|- ..+..-.|...+....+..+.. ......+-.-|.
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~-~~~~~~lg~~~~ 512 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGE-LAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTC-SHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCC
Q 025503 88 QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPT 167 (252)
Q Consensus 88 ~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt 167 (252)
+. |+| +. .+.|++|+++
T Consensus 513 ~~-------------------------------------g~~-----------------~~-~~~~~~al~~-------- 529 (681)
T 2pzi_A 513 LA-------------------------------------GNT-----------------DE-HKFYQTVWST-------- 529 (681)
T ss_dssp HH-------------------------------------TCC-----------------CT-TCHHHHHHHH--------
T ss_pred Hc-------------------------------------CCh-----------------HH-HHHHHHHHHh--------
Q ss_pred CcchHHHhhhHHHHHHHhhCChHHHHHHHHHH
Q 025503 168 HPIRLGLALNFSVFYYEILNSPERACHLAKQA 199 (252)
Q Consensus 168 ~PirLgL~LN~SVF~yEi~~~~~~A~~iak~a 199 (252)
+|-......|.+..+.. +|+.++|+...++|
T Consensus 530 ~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~a 560 (681)
T 2pzi_A 530 NDGVISAAFGLARARSA-EGDRVGAVRTLDEV 560 (681)
T ss_dssp CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHTS
T ss_pred CCchHHHHHHHHHHHHH-cCCHHHHHHHHHhh
No 181
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=35.27 E-value=1.3e+02 Score=21.80 Aligned_cols=79 Identities=8% Similarity=0.112 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhHhhhh--hhhCchhHHHHHHHHHHHHHHHHHHHH
Q 025503 21 YDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE--EAKGNEQNVKRIKEYRQRVEDELAKIC 98 (252)
Q Consensus 21 y~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~~eq~~--~~~~~~~~~~~i~~yk~ki~~EL~~~c 98 (252)
|.....-++..+..-+.++-++|+-........+..-..=++.+...-+.. +..........++.||..+..+|..--
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~l 89 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWKKTIQSDIKRPL 89 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444678889998877777777666544333332211222 111123456788899988877666543
Q ss_pred H
Q 025503 99 N 99 (252)
Q Consensus 99 ~ 99 (252)
+
T Consensus 90 k 90 (97)
T 3onj_A 90 Q 90 (97)
T ss_dssp H
T ss_pred H
Confidence 3
No 182
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=33.55 E-value=1e+02 Score=29.45 Aligned_cols=53 Identities=17% Similarity=0.053 Sum_probs=36.4
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHhccCCCCC-cchHHHhhhHHHHHHHhhCC
Q 025503 134 AEFKGADDRKEAADHSLKAYEAATAAAASELPPTH-PIRLGLALNFSVFYYEILNS 188 (252)
Q Consensus 134 aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~-PirLgL~LN~SVF~yEi~~~ 188 (252)
||....+.-.+++++|.++|++|++..++ +..|+ |--.-..||-| -.||..||
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~a-k~yE~aGD 489 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNAA-KKHEMAGD 489 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHH-HHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHh-hhhhhccH
Confidence 56667777778999999999999999975 55444 44444444443 34776554
No 183
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=33.17 E-value=69 Score=29.25 Aligned_cols=48 Identities=8% Similarity=-0.146 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
-+.|...|++|+++ .|.+ .....|.+..|+. +|+.++|+...++|+..
T Consensus 56 ~~~A~~~~~~al~l-----~p~~---~~~~~~lg~~~~~-~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 56 YGYALGDATRAIEL-----DKKY---IKGYYRRAASNMA-LGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHHHS-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35788899998854 3444 3455666666555 79999999888887653
No 184
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=33.13 E-value=21 Score=26.25 Aligned_cols=59 Identities=17% Similarity=0.301 Sum_probs=36.9
Q ss_pred chHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHH----HhhhHHHHH
Q 025503 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLG----LALNFSVFY 182 (252)
Q Consensus 117 eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg----L~LN~SVF~ 182 (252)
.+.+|+ .|+---|+-.+...=+ .-+..+.+..+.|++--+ ..|.||..|+ +.-+|++|+
T Consensus 5 ~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~R 67 (92)
T 2g0u_A 5 PTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYR 67 (92)
T ss_dssp CCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 345565 3455556666543211 224556677777775543 6899999998 667788775
No 185
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=31.84 E-value=38 Score=29.29 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc--------------chHHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 147 DHSLKAYEAATAAAASELPPTHP--------------IRLGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 147 ~~A~~aY~~A~~~a~~~L~pt~P--------------irLgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 186
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=31.67 E-value=34 Score=28.38 Aligned_cols=39 Identities=23% Similarity=0.508 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI 204 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai 204 (252)
-+.|.++|++|..- .- .| .+++...+|+.|||.+||.=.
T Consensus 19 YE~A~~~Ye~a~~n---g~---~p--------------Q~~Kql~KA~NIAKse~drd~ 57 (199)
T 3ub0_A 19 YEKARADLEEAKKN---DV---SP--------------QLLKQLTKACNIAKSEFEREA 57 (199)
T ss_dssp HHHHHHHHHHHHHT---TC---CH--------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CC---CH--------------HHHHHHHHHHHHHHHHHhHHH
Confidence 45788888888532 22 22 235678899999999998643
No 187
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=28.85 E-value=63 Score=26.11 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=48.2
Q ss_pred CCCCCchHhHHhhhhcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCC----CcchHHHhhhHHHHHHHhhC
Q 025503 112 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPT----HPIRLGLALNFSVFYYEILN 187 (252)
Q Consensus 112 ~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt----~PirLgL~LN~SVF~yEi~~ 187 (252)
.+.++++-.-|+++--.. -.+..+ ...++-.+.|++|.. .+||+ ..-+.-|-++|+.| .++ +
T Consensus 9 ~p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~ 74 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-Q 74 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-H
T ss_pred CCCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-c
Confidence 344677777777762221 001112 567788899999874 35554 44556689999999 465 8
Q ss_pred ChHHHHHHHHHH
Q 025503 188 SPERACHLAKQA 199 (252)
Q Consensus 188 ~~~~A~~iak~a 199 (252)
|+++|.++=+.|
T Consensus 75 D~d~aR~vy~~a 86 (161)
T 4h7y_A 75 EPDDARDYFQMA 86 (161)
T ss_dssp CGGGCHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999888777766
No 188
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=27.89 E-value=73 Score=28.25 Aligned_cols=62 Identities=15% Similarity=0.117 Sum_probs=43.0
Q ss_pred cccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcch-HHHhhhHHHHHHHhhCChHHHHHHHHHHHH
Q 025503 127 GDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR-LGLALNFSVFYYEILNSPERACHLAKQAFD 201 (252)
Q Consensus 127 gDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir-LgL~LN~SVF~yEi~~~~~~A~~iak~afd 201 (252)
|-+|-.+=++.-|+. ++|.+.|++|+++. |-. +..-.-|+-|+..-.++.+.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 555544445545543 57999999999874 332 555667777777767999998888777765
No 189
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=27.84 E-value=2.5e+02 Score=23.02 Aligned_cols=52 Identities=15% Similarity=0.271 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDE 202 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ 202 (252)
.+.|...|++|+... .++|.+ ...+-.++..|+.. .|+.+.|..+.++|.+.
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~--~~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~~ 270 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEK--SGEIWARFLAFESN-IGDLASILKVEKRRFTA 270 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGG--CHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHH--HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 457899999997541 355543 24456777777766 69999998776666544
No 190
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=27.83 E-value=2.8e+02 Score=26.32 Aligned_cols=188 Identities=16% Similarity=0.227 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHH---HhhhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHH
Q 025503 19 ERYDEMVEAMKKVAKLDVELTVE---ERNLVSVG---YKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVED 92 (252)
Q Consensus 19 ery~dm~~~mk~~i~~~~~L~~e---ERnLls~a---yKn~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~ 92 (252)
++|.+-++-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++....+..-...++.||.++..
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 45666677777777554445444 44566655 5577777788888887767777655455556777888777543
Q ss_pred -------HHHHHHHHHH-HHHhhcccCCCCCCchHhHHhhhhccccccccc-cc-CccchHHHH---HHHHHHHHHHHH-
Q 025503 93 -------ELAKICNDIL-SVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAE-FK-GADDRKEAA---DHSLKAYEAATA- 158 (252)
Q Consensus 93 -------EL~~~c~eii-~lid~~Lip~~~~~eskvfy~KmkgDyyRY~aE-~~-~~~~~~~~~---~~A~~aY~~A~~- 158 (252)
|=..+-.|.| +++| |-||----.|| +. -|.--...+ .-+...|+-.--
T Consensus 201 L~~aIe~Er~~~~EEAIqe~~d------------------msaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI 262 (526)
T 3iyk_A 201 LKNAIEVERDGMQEEAIQEIAG------------------MTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVI 262 (526)
T ss_pred HHHHHHHHHhHHHHHHHHHHhc------------------chHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 1222 22333222222 21 122222211 123445543322
Q ss_pred -------HHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHH--HHHHHHHHhhccCCccchHHHHHHHHHHHh
Q 025503 159 -------AAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK--QAFDEAIAELDSLNEESYKDSTLIMQLLRD 227 (252)
Q Consensus 159 -------~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak--~afd~Ai~~ld~l~ee~y~ds~~IlqlLrd 227 (252)
+..-..|+.||--|..+|-. =+ .-.+|..-|.-+.. +.+++--.+++.+.++..+.....++--+.
T Consensus 263 ~aLtGidlsHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 263 NALSGIDLTHLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred HHHhCCCchhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22235788999988888742 01 12234433333322 456666677777777666555555544444
No 191
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=27.75 E-value=2.1e+02 Score=21.96 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 66 (252)
-+..++.+..+.|+|++++.++++++..+|. +..=...+..+|.. .+....|...+..
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 3456888889999999999999999987776 33344455555543 2445555555543
No 192
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=27.49 E-value=79 Score=26.21 Aligned_cols=31 Identities=6% Similarity=-0.004 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~ 36 (252)
+.+..+|.+..+.|+|++++.++.+++..+|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456677778888888888888888776544
No 193
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=27.35 E-value=1.5e+02 Score=20.36 Aligned_cols=44 Identities=7% Similarity=-0.039 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ay 50 (252)
+.+..++......|+|++++.++++++..+|. +.+=...+..+|
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~ 53 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCY 53 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHH
Confidence 34556666667777777777777777766554 233344444443
No 194
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=27.07 E-value=1.4e+02 Score=22.77 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHhhhh
Q 025503 19 ERYDEMVEAMKKVAKLDV-ELTVEERNLVSVGYKNVI 54 (252)
Q Consensus 19 ery~dm~~~mk~~i~~~~-~L~~eERnLls~ayKn~i 54 (252)
++|+.++.+++.+-..++ .++.+++-.|=.-||.+.
T Consensus 26 ~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT 62 (119)
T 3flv_A 26 TRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQAT 62 (119)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHh
Confidence 578999999999887654 689999998888888665
No 195
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=26.45 E-value=3.5e+02 Score=24.17 Aligned_cols=52 Identities=12% Similarity=0.135 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcc-hHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPI-RLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~Pi-rLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
.+.|...|++|+.. .|.+|- +..+-..|.-|... .|+.+.|..+.+++....
T Consensus 441 ~~~Ar~~~~~al~~-----~~~~~~~~~~lw~~~~~~e~~-~G~~~~~~~~~~r~~~~~ 493 (530)
T 2ooe_A 441 DNNTRVLFERVLTS-----GSLPPEKSGEIWARFLAFESN-IGDLASILKVEKRRFTAF 493 (530)
T ss_dssp HHHHHHHHHHHHHS-----CCSCGGGCHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC
Confidence 35688888888643 344553 44566677777554 588888877777665543
No 196
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=25.05 E-value=24 Score=33.34 Aligned_cols=47 Identities=23% Similarity=0.310 Sum_probs=30.3
Q ss_pred hcccccccccccCccchHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhH------HHHHHH
Q 025503 126 KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNF------SVFYYE 184 (252)
Q Consensus 126 kgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~------SVF~yE 184 (252)
-||..||.... ..|...|++|..+.=..= ..-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G--~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNG--QPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBS--HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCC--chHHHHHHHHhcccccHHHHHHHH
Confidence 69999999764 579999999987641111 112456655544 566554
No 197
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=24.41 E-value=1.5e+02 Score=26.99 Aligned_cols=20 Identities=0% Similarity=-0.022 Sum_probs=0.4
Q ss_pred hCCHHHHHHHHHHHHhcCCC
Q 025503 18 AERYDEMVEAMKKVAKLDVE 37 (252)
Q Consensus 18 ~ery~dm~~~mk~~i~~~~~ 37 (252)
.|++++++.+++++++.+|.
T Consensus 2 ~g~~~~A~~~~~~al~~~p~ 21 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ 21 (568)
T ss_dssp -------------------C
T ss_pred CccHHHHHHHHHHHHHhCCC
Confidence 47788888888888766553
No 198
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=24.19 E-value=1.4e+02 Score=25.00 Aligned_cols=16 Identities=19% Similarity=0.183 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 025503 146 ADHSLKAYEAATAAAA 161 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~ 161 (252)
++.|.+.|..++..+.
T Consensus 188 ~~~a~~~Y~~~v~~~n 203 (305)
T 2efl_A 188 AEDSKADYSSILQKFN 203 (305)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4567777887777663
No 199
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.99 E-value=3.3e+02 Score=23.02 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHH
Q 025503 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEA 203 (252)
Q Consensus 146 ~~~A~~aY~~A~~~a~~~L~pt~PirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~A 203 (252)
-+.|...|+++...... ...+|..+...++-+-.|+. +|+.++|..+.++|..-+
T Consensus 151 ~~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 151 YKDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHK-LRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHh
Confidence 35688888888887743 33467777778887777766 799999999888776544
No 200
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=23.99 E-value=43 Score=24.38 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=28.5
Q ss_pred hCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 025503 18 AERYDEMVEAMKKVAKLDVELTVEERNLVSVGYK 51 (252)
Q Consensus 18 ~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayK 51 (252)
++.+||++..+.++ .....|+.++..-|.|+.|
T Consensus 24 ~~nhDDi~~Ive~~-~~~~~~~~~~a~af~vGLK 56 (88)
T 3cjl_A 24 FSLHDDLFKLLEKV-DGKMDMTPEQTQAFMVGLK 56 (88)
T ss_dssp EEESSCHHHHHHHH-TTTSSSCHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHh-hccCCCCHHHHHHHHHHHH
Confidence 46789999999887 6678899999999999887
No 201
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=23.06 E-value=1.6e+02 Score=25.44 Aligned_cols=76 Identities=9% Similarity=0.147 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh-----hhhhhhhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHH
Q 025503 21 YDEMVEAMKKVAKLDVELTVEERNLVSVGYK-----NVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELA 95 (252)
Q Consensus 21 y~dm~~~mk~~i~~~~~L~~eERnLls~ayK-----n~i~~~R~s~R~l~~~eq~~~~~~~~~~~~~i~~yk~ki~~EL~ 95 (252)
-+|+..|+++-+....+....=+.|-..... .-.|+.+.+|..+...-.... ..+......+...|...|.
T Consensus 36 ~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~gtl~~aw~~~~~e~e~~a----~~H~~~a~~L~~~v~~~l~ 111 (337)
T 2x3v_A 36 CNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVS----ELHQEVKNSLLNEDLEKVK 111 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 4567777766654433333333333333222 235778899998864332221 1234444555555555555
Q ss_pred HHHHH
Q 025503 96 KICND 100 (252)
Q Consensus 96 ~~c~e 100 (252)
.++.+
T Consensus 112 ~~~~e 116 (337)
T 2x3v_A 112 NWQKD 116 (337)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 202
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=21.26 E-value=3e+02 Score=21.64 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=26.1
Q ss_pred HHHHHHHHHH----hCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Q 025503 8 HVYLARLAEQ----AERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKN 52 (252)
Q Consensus 8 ~~~~Aklaeq----~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn 52 (252)
+..++.+..+ .+++++++.++++.++.+ +.+=...|..+|..
T Consensus 41 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~ 86 (273)
T 1ouv_A 41 CFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYS 86 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhC
Confidence 4456666666 777777777777776654 44555555555544
No 203
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=21.04 E-value=2.4e+02 Score=20.82 Aligned_cols=44 Identities=5% Similarity=-0.109 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025503 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (252)
Q Consensus 6 e~~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ay 50 (252)
+.++.+|....+.|+|++++..++++++.+|.- .+=...+..+|
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~la~~~ 50 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSR-GDVKLAKADCL 50 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHH
Confidence 467888999999999999999999988765542 23334444443
No 204
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=20.62 E-value=3.8e+02 Score=22.57 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhhHHHHH-HhHhhhhhhhCchhHHHHHHHH
Q 025503 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL-SSIEQKEEAKGNEQNVKRIKEY 86 (252)
Q Consensus 8 ~~~~Aklaeq~ery~dm~~~mk~~i~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l-~~~eq~~~~~~~~~~~~~i~~y 86 (252)
+..+|.+..+.|+|++++.++.++++.+|. +..=...+..+|... +....|...+ ..++........-.....+...
T Consensus 199 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 199 HLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAV-NDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 025503 87 RQRVEDELAKICNDILSVIDE 107 (252)
Q Consensus 87 k~ki~~EL~~~c~eii~lid~ 107 (252)
..+..+.-...+..++..+..
T Consensus 277 ~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 277 IRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhh
No 205
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=20.62 E-value=1.2e+02 Score=21.30 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 025503 7 HHVYLARLAEQAERYDEMVEAMKKVAK 33 (252)
Q Consensus 7 ~~~~~Aklaeq~ery~dm~~~mk~~i~ 33 (252)
+++-.|--.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345556566777999999888877764
Done!