Query 025504
Match_columns 252
No_of_seqs 145 out of 765
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 11:39:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025504.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025504hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 98.2 1.3E-05 4.3E-10 63.3 11.6 129 82-226 32-162 (166)
2 2bfw_A GLGA glycogen synthase; 97.6 0.00027 9.1E-09 57.2 9.2 90 128-221 106-198 (200)
3 3c48_A Predicted glycosyltrans 97.4 0.00063 2.1E-08 61.6 10.1 95 128-225 316-412 (438)
4 3okp_A GDP-mannose-dependent a 97.4 0.0011 3.6E-08 58.8 11.3 94 128-225 263-366 (394)
5 2gek_A Phosphatidylinositol ma 97.3 0.00042 1.4E-08 61.8 7.3 95 128-225 273-370 (406)
6 2nzw_A Alpha1,3-fucosyltransfe 97.3 0.0015 5.2E-08 59.6 10.3 124 78-212 177-308 (371)
7 2jjm_A Glycosyl transferase, g 97.2 0.0029 9.8E-08 56.5 11.4 95 128-225 275-372 (394)
8 2f9f_A First mannosyl transfer 96.7 0.0039 1.3E-07 49.8 6.8 72 128-203 88-159 (177)
9 1f0k_A MURG, UDP-N-acetylgluco 96.6 0.0046 1.6E-07 54.4 7.8 89 129-223 246-342 (364)
10 2r60_A Glycosyl transferase, g 96.6 0.0076 2.6E-07 55.7 9.3 95 128-225 345-446 (499)
11 2iw1_A Lipopolysaccharide core 96.6 0.004 1.4E-07 54.7 6.8 95 128-225 261-358 (374)
12 2iuy_A Avigt4, glycosyltransfe 96.4 0.0038 1.3E-07 54.5 5.4 74 128-205 222-307 (342)
13 3fro_A GLGA glycogen synthase; 96.4 0.0059 2E-07 54.6 6.8 95 127-225 320-417 (439)
14 2qzs_A Glycogen synthase; glyc 96.0 0.015 5E-07 53.4 7.7 92 129-225 358-463 (485)
15 1rzu_A Glycogen synthase 1; gl 96.0 0.017 5.7E-07 53.0 7.9 91 129-224 357-461 (485)
16 3rhz_A GTF3, nucleotide sugar 95.8 0.015 5E-07 52.2 6.7 135 82-225 178-323 (339)
17 2vsy_A XCC0866; transferase, g 95.8 0.055 1.9E-06 50.6 10.8 100 129-245 445-563 (568)
18 3oy2_A Glycosyltransferase B73 95.4 0.01 3.5E-07 53.1 4.0 94 128-225 264-377 (413)
19 2x0d_A WSAF; GT4 family, trans 95.1 0.013 4.5E-07 53.6 3.6 97 127-229 304-401 (413)
20 2x6q_A Trehalose-synthase TRET 94.8 0.035 1.2E-06 49.7 5.6 92 129-225 307-401 (416)
21 1vgv_A UDP-N-acetylglucosamine 93.3 0.037 1.3E-06 48.8 2.6 77 128-213 273-351 (384)
22 3vue_A GBSS-I, granule-bound s 92.9 0.15 5.3E-06 48.2 6.4 94 128-226 392-499 (536)
23 3beo_A UDP-N-acetylglucosamine 91.9 0.095 3.2E-06 45.9 3.3 77 128-213 273-351 (375)
24 3s28_A Sucrose synthase 1; gly 90.8 0.27 9.4E-06 49.1 5.7 95 129-226 655-757 (816)
25 1uqt_A Alpha, alpha-trehalose- 89.1 0.77 2.6E-05 42.9 7.0 92 128-224 342-440 (482)
26 3nb0_A Glycogen [starch] synth 85.8 0.69 2.4E-05 45.5 4.6 97 129-227 510-622 (725)
27 2o6l_A UDP-glucuronosyltransfe 84.3 3.6 0.00012 31.6 7.6 83 132-221 79-167 (170)
28 2hy7_A Glucuronosyltransferase 81.8 2 6.8E-05 38.6 5.7 65 128-201 275-347 (406)
29 3s2u_A UDP-N-acetylglucosamine 79.6 5 0.00017 35.4 7.5 82 129-218 244-338 (365)
30 3dzc_A UDP-N-acetylglucosamine 78.8 4.9 0.00017 36.0 7.3 94 128-241 298-394 (396)
31 1v4v_A UDP-N-acetylglucosamine 75.2 6 0.00021 34.3 6.6 76 129-213 266-343 (376)
32 2ygg_A Sodium/hydrogen exchang 66.0 9.2 0.00032 26.1 4.4 46 203-248 4-54 (70)
33 3h4t_A Glycosyltransferase GTF 66.0 18 0.0006 32.1 7.7 86 129-222 276-365 (404)
34 3ot5_A UDP-N-acetylglucosamine 65.8 16 0.00056 32.6 7.5 94 129-241 293-388 (403)
35 3otg_A CALG1; calicheamicin, T 63.2 16 0.00053 31.9 6.7 86 130-220 301-392 (412)
36 3oti_A CALG3; calicheamicin, T 61.9 79 0.0027 27.3 11.6 83 129-218 291-379 (398)
37 3t5t_A Putative glycosyltransf 45.2 38 0.0013 31.6 6.4 90 128-221 362-456 (496)
38 2xci_A KDO-transferase, 3-deox 45.0 16 0.00056 32.1 3.7 41 129-170 269-310 (374)
39 2iyf_A OLED, oleandomycin glyc 40.6 28 0.00097 30.6 4.6 83 132-219 294-382 (430)
40 2q2k_A Hypothetical protein; p 37.0 46 0.0016 21.6 3.9 40 182-221 25-65 (70)
41 3q3e_A HMW1C-like glycosyltran 35.7 54 0.0018 31.7 5.9 109 128-244 509-626 (631)
42 2xze_Q Charged multivesicular 33.6 30 0.001 21.0 2.4 15 205-219 25-39 (40)
43 1iir_A Glycosyltransferase GTF 30.7 39 0.0013 29.7 3.8 85 130-222 294-382 (415)
44 2yjn_A ERYCIII, glycosyltransf 30.4 68 0.0023 28.4 5.4 68 131-203 329-400 (441)
45 1rrv_A Glycosyltransferase GTF 25.7 50 0.0017 29.0 3.6 86 130-223 295-384 (416)
46 2iya_A OLEI, oleandomycin glyc 23.8 47 0.0016 29.1 3.0 68 131-203 315-386 (424)
47 3twe_A Alpha4H; unknown functi 21.3 75 0.0026 16.9 2.3 15 207-221 9-23 (27)
48 4fzr_A SSFS6; structural genom 21.3 1.8E+02 0.0062 24.9 6.4 85 129-218 292-382 (398)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.24 E-value=1.3e-05 Score=63.30 Aligned_cols=129 Identities=15% Similarity=0.126 Sum_probs=83.4
Q ss_pred ceEEEeeccCCCCchHHHHHHhhcCCCCcEEeecCCCCCCCCcccCcchHHHhhccceEEEeecCCCCCChhHHHHhhcC
Q 025504 82 SILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYE 161 (252)
Q Consensus 82 ~~L~~F~G~~~g~~R~~L~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~G 161 (252)
++-+.+.|. |..+..+.+..+.....+.+ +.. ...+..+.++.+..++.|.-......-+.|||++|
T Consensus 32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~----------~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G 98 (166)
T 3qhp_A 32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFV----------NSNELLEILKTCTLYVHAANVESEAIACLEAISVG 98 (166)
T ss_dssp GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCC----------CHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT
T ss_pred CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eec----------CHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC
Confidence 566777774 44455555444332223333 332 25678899999999999986666678999999999
Q ss_pred ceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHhhhceeCC
Q 025504 162 CVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEKRYRKMQMMVKKVQQHFLWHP 226 (252)
Q Consensus 162 CIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~~~~~m~~~~~~~~~~f~~~~ 226 (252)
|+|||..+..- ...+++.-... .++..+..++.+.|..+ +++...+|.++.++..++|.|+.
T Consensus 99 ~vPvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 99 IVPVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp CCEEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred CCcEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 99999944221 12233322333 56667777666555544 67888899999888778888764
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.62 E-value=0.00027 Score=57.17 Aligned_cols=90 Identities=19% Similarity=0.128 Sum_probs=65.3
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC---C
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI---S 204 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i---~ 204 (252)
..++.+.|+.+.++++|.-....+..++|||++|| |||.++.- .+.+.+ -....+.++..+..++.+.|..+ .
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDII-TNETGILVKAGDPGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCH--HHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCC--ChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcC
Confidence 45788999999999999866667788999999998 67777632 223334 23445666777777666665554 6
Q ss_pred HHHHHHHHHHHHHHhhh
Q 025504 205 EKRYRKMQMMVKKVQQH 221 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~~~ 221 (252)
++.+.+|.++.++..+.
T Consensus 182 ~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 182 RSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78888998888776654
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.44 E-value=0.00063 Score=61.56 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=70.3
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 205 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 205 (252)
..+..+.|+.+..++.|.-.......++|||++|| |||.++.- ...+++.=....+.++..+..++.+.|..+ .+
T Consensus 316 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~ 392 (438)
T 3c48_A 316 PSELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVG--GLPIAVAEGETGLLVDGHSPHAWADALATLLDDD 392 (438)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCT--THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCH
T ss_pred hHHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCC--ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCH
Confidence 35788999999999999866666789999999999 88887742 233445444556777877877766666554 56
Q ss_pred HHHHHHHHHHHHHhhhceeC
Q 025504 206 KRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 206 ~~~~~m~~~~~~~~~~f~~~ 225 (252)
+...+|.++.++....|.|+
T Consensus 393 ~~~~~~~~~~~~~~~~~s~~ 412 (438)
T 3c48_A 393 ETRIRMGEDAVEHARTFSWA 412 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 77888888887776667665
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.43 E-value=0.0011 Score=58.77 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=70.1
Q ss_pred cchHHHhhccceEEEeecCC-------CCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHH
Q 025504 128 KTDYIQHMKSSKYCICAKGY-------EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNIL 200 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~-------~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L 200 (252)
..+..+.++.+.+++.|.-. ......++|||++|| |||.++.- ...+++.=. ..+.++..+..++.+.|
T Consensus 263 ~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~~-~g~~~~~~d~~~l~~~i 338 (394)
T 3okp_A 263 YQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSG--GAPETVTPA-TGLVVEGSDVDKLSELL 338 (394)
T ss_dssp HHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSST--TGGGGCCTT-TEEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCC--ChHHHHhcC-CceEeCCCCHHHHHHHH
Confidence 46888999999999999765 556789999999995 88887742 344555544 67778877887776666
Q ss_pred hcC--CHHHHHHHHHHHHHHh-hhceeC
Q 025504 201 LSI--SEKRYRKMQMMVKKVQ-QHFLWH 225 (252)
Q Consensus 201 ~~i--~~~~~~~m~~~~~~~~-~~f~~~ 225 (252)
..+ .++...+|.++.++.. ++|.|+
T Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 339 IELLDDPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 554 6788888888877654 457665
No 5
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.32 E-value=0.00042 Score=61.77 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=67.6
Q ss_pred cchHHHhhccceEEEeecC-CCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--C
Q 025504 128 KTDYIQHMKSSKYCICAKG-YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--S 204 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G-~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 204 (252)
..++.+.|+.|.+++.|.. .......++|||++|| |||.++.-. +.+.+.=.+..+.++..+..++.+.|..+ .
T Consensus 273 ~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 273 DATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILED 349 (406)
T ss_dssp HHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC
Confidence 4567899999999999953 4445778999999998 788877521 22333333455667777777776666554 5
Q ss_pred HHHHHHHHHHHHHHhhhceeC
Q 025504 205 EKRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~~~f~~~ 225 (252)
++...+|.++.++..+.|.|+
T Consensus 350 ~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 350 DQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHHHHHHGGGGBHH
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 777888888888777676664
No 6
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=97.26 E-value=0.0015 Score=59.62 Aligned_cols=124 Identities=13% Similarity=0.232 Sum_probs=83.3
Q ss_pred CCCCceEEEeeccCCCCchHHHHHHhhcCCCCcEEeecCCCCCCCCcccCcchHHHhhccceEEEeecC---CCCCChhH
Q 025504 78 ASQRSILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKG---YEVHSPRV 154 (252)
Q Consensus 78 ~~~R~~L~~F~G~~~g~~R~~L~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCL~p~G---~~~~s~rl 154 (252)
+.+.+..++++..+....|..+++.+... -.|.++|.|.+..|. ......+.+++-||.|+..- ..-.+--|
T Consensus 177 ~~K~k~v~wvvSnc~~~~R~~~~~~L~k~-i~Vd~~G~c~~~~~~----~~~~~~~~l~~YKFyLafENs~c~dYvTEK~ 251 (371)
T 2nzw_A 177 PLKRGFASFVASNPNAPIRNAFYDALNSI-EPVTGGGSVRNTLGY----NVKNKNEFLSQYKFNLCFENTQGYGYVTEKI 251 (371)
T ss_dssp TTSSEEEEECCSCCCCHHHHHHHHHHTTT-SCCEECSSTTCCSSS----CCSCHHHHHTTEEEEEEECSSCCTTCCCTHH
T ss_pred CCCceEEEEEEeCCCcHHHHHHHHHHhCc-CCEeeCCCccCCCCC----ccccHHHHHhcCcEEEEEeccCCCCcccHHH
Confidence 33445555666766555788888888754 357788888543221 12457788999999999753 35568999
Q ss_pred HHHhhcCceeEEecCCC---CCCCCCCCCCCceEEEEcCCChhhHHHHHhcCC--HHHHHHHH
Q 025504 155 VEAIFYECVPVIISDNF---VPPFFEILNWESFAVFVLERDIPNLKNILLSIS--EKRYRKMQ 212 (252)
Q Consensus 155 ~eal~~GCIPVii~d~~---~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~--~~~~~~m~ 212 (252)
++|+.+|||||+++..- .+|=...|+..+| +...+|.+.|+.+. ++.+.++.
T Consensus 252 ~~al~~g~VPI~~G~~~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 252 IDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp HHHHHTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhCCeEEEEECCCchhhhCCCCceEEcccC------CCHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999998642 2343445555544 25567777777664 55565544
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.19 E-value=0.0029 Score=56.48 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=70.6
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 205 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 205 (252)
..+..+.|+.+..++.|.-......-++|||++|| |||.++.- ...+++.=.+..+.++..+..++.+.|..+ .+
T Consensus 275 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 275 QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGV-PCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-CEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCH
T ss_pred hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCC-CEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 45788999999999999766566789999999995 78777742 334555545567778887887776666554 57
Q ss_pred HHHHHHHHHHHHHh-hhceeC
Q 025504 206 KRYRKMQMMVKKVQ-QHFLWH 225 (252)
Q Consensus 206 ~~~~~m~~~~~~~~-~~f~~~ 225 (252)
+...+|.++.++.. +.|.|+
T Consensus 352 ~~~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 352 ELHRNMGERARESVYEQFRSE 372 (394)
T ss_dssp HHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 77888888887765 777665
No 8
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.66 E-value=0.0039 Score=49.77 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=48.9
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 203 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i 203 (252)
..+..+.++.+.+++.|.-......-++|||++|| |||.++.- .+.+.+.-....+.+ ..+..++.+.|..+
T Consensus 88 ~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l 159 (177)
T 2f9f_A 88 EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG--GFKETVINEKTGYLV-NADVNEIIDAMKKV 159 (177)
T ss_dssp HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH--HHHHHCCBTTTEEEE-CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC--CHHHHhcCCCccEEe-CCCHHHHHHHHHHH
Confidence 45578999999999997655455778999999998 77777642 223344334445555 66776666555443
No 9
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=96.65 E-value=0.0046 Score=54.36 Aligned_cols=89 Identities=12% Similarity=0.066 Sum_probs=64.0
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCC------CCCCCCCceEEEEcCCC--hhhHHHHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPF------FEILNWESFAVFVLERD--IPNLKNIL 200 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf------~~~idw~~fsv~i~~~~--~~~l~~~L 200 (252)
.+..+.|+.+..++.|.| ..-+.||+++|+ |||.++.--.|. ..+++-. ..+.++..+ ..+|.+.|
T Consensus 246 ~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i 319 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTL 319 (364)
T ss_dssp SCHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHH
T ss_pred hhHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHH
Confidence 467899999999999976 567999999998 888876433332 1233323 377788877 77888888
Q ss_pred hcCCHHHHHHHHHHHHHHhhhce
Q 025504 201 LSISEKRYRKMQMMVKKVQQHFL 223 (252)
Q Consensus 201 ~~i~~~~~~~m~~~~~~~~~~f~ 223 (252)
..++++..++|.++.++..+.|.
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~ 342 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAASIPDA 342 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTCCTTH
T ss_pred HhcCHHHHHHHHHHHHHhhccCH
Confidence 88866677778777766554443
No 10
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.60 E-value=0.0076 Score=55.68 Aligned_cols=95 Identities=21% Similarity=0.219 Sum_probs=66.0
Q ss_pred cchHHHhhccc----eEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC
Q 025504 128 KTDYIQHMKSS----KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 203 (252)
Q Consensus 128 ~~~y~~~~~~S----~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i 203 (252)
..+..+.|+.+ ..++.|.-......-+.|||++|| |||.++.- ...+++.=....+.++..+..++.+.|..+
T Consensus 345 ~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~--g~~e~v~~~~~g~l~~~~d~~~la~~i~~l 421 (499)
T 2r60_A 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNG--GPAEILDGGKYGVLVDPEDPEDIARGLLKA 421 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSB--HHHHHTGGGTSSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCC--CHHHHhcCCceEEEeCCCCHHHHHHHHHHH
Confidence 46788999999 999888655556778999999998 88887732 223444333445677777777666655543
Q ss_pred --CHHHHHHHHHHHHHHhh-hceeC
Q 025504 204 --SEKRYRKMQMMVKKVQQ-HFLWH 225 (252)
Q Consensus 204 --~~~~~~~m~~~~~~~~~-~f~~~ 225 (252)
.++...+|.++.++... +|.|+
T Consensus 422 l~~~~~~~~~~~~a~~~~~~~fs~~ 446 (499)
T 2r60_A 422 FESEETWSAYQEKGKQRVEERYTWQ 446 (499)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHSBHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 56777888877776544 47775
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.56 E-value=0.004 Score=54.68 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=68.7
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEc-CCChhhHHHHHhcC--C
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVL-ERDIPNLKNILLSI--S 204 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~-~~~~~~l~~~L~~i--~ 204 (252)
..+..+.|+.|.+++.|.-....+.-++|||++|+ |||.++.- ...+.+.=....+.++ ..+..++.+.|..+ .
T Consensus 261 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence 45788999999999999765566788999999999 88887742 2233333234566776 56777666655554 6
Q ss_pred HHHHHHHHHHHHHHhhhceeC
Q 025504 205 EKRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~~~f~~~ 225 (252)
++...+|.++.++....+.|.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 338 SPLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHHHHHHHHHHHHHHHSCCS
T ss_pred hHHHHHHHHHHHHHHHHhhHH
Confidence 788889999888887776543
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=96.37 E-value=0.0038 Score=54.54 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=53.6
Q ss_pred cchHHHhhccceEEEeecC----------CCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCC--CceEEEEcCCChhh
Q 025504 128 KTDYIQHMKSSKYCICAKG----------YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNW--ESFAVFVLERDIPN 195 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G----------~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw--~~fsv~i~~~~~~~ 195 (252)
..+..+.|+++..++.|.- ......-+.|||++|| |||.++.- ...+++.- .+..+.++. +..+
T Consensus 222 ~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~~~~~g~~~~~-d~~~ 297 (342)
T 2iuy_A 222 GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNG--CLAEIVPSVGEVVGYGTDF-APDE 297 (342)
T ss_dssp HHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTT--THHHHGGGGEEECCSSSCC-CHHH
T ss_pred HHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCC--ChHHHhcccCCCceEEcCC-CHHH
Confidence 4566899999999999876 4556788999999997 88887742 23344433 344555666 8888
Q ss_pred HHHHHhcCCH
Q 025504 196 LKNILLSISE 205 (252)
Q Consensus 196 l~~~L~~i~~ 205 (252)
+.+.|..+-+
T Consensus 298 l~~~i~~l~~ 307 (342)
T 2iuy_A 298 ARRTLAGLPA 307 (342)
T ss_dssp HHHHHHTSCC
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 13
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.37 E-value=0.0059 Score=54.57 Aligned_cols=95 Identities=20% Similarity=0.205 Sum_probs=69.0
Q ss_pred CcchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC---
Q 025504 127 GKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--- 203 (252)
Q Consensus 127 ~~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--- 203 (252)
...+..+.++.|..++.|.-......-++|||++|| |||.++.- ...++++ ....+.++..+..++.+.|..+
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~--~~~e~~~-~~~g~~~~~~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDIIT-NETGILVKAGDPGELANAILKALEL 395 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESST--HHHHHCC-TTTCEEECTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCC--CcceeEE-cCceEEeCCCCHHHHHHHHHHHHhc
Confidence 356678999999999999877667889999999996 78777642 2234443 2256777877877766666543
Q ss_pred CHHHHHHHHHHHHHHhhhceeC
Q 025504 204 SEKRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 204 ~~~~~~~m~~~~~~~~~~f~~~ 225 (252)
+++...+|.++.++..+.|.|+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 396 SRSDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp TTTTTHHHHHHHHHHHHTSCHH
T ss_pred CHHHHHHHHHHHHHHHhhCcHH
Confidence 4667788888888777777664
No 14
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.02 E-value=0.015 Score=53.39 Aligned_cols=92 Identities=9% Similarity=0.056 Sum_probs=61.7
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCC---------ceEEEEcCCChhhHHHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE---------SFAVFVLERDIPNLKNI 199 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~---------~fsv~i~~~~~~~l~~~ 199 (252)
....+.|+.+..++.|.-......-+.|||++|| |||.++.- .+.+++.=. ...+.++..+..++.+.
T Consensus 358 ~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~ 434 (485)
T 2qzs_A 358 AFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTG--GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRA 434 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCC--CccceeccCccccccccccceEEECCCCHHHHHHH
Confidence 3446889999999999766566788999999997 67776632 122333322 45677788787776666
Q ss_pred HhcC-----CHHHHHHHHHHHHHHhhhceeC
Q 025504 200 LLSI-----SEKRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 200 L~~i-----~~~~~~~m~~~~~~~~~~f~~~ 225 (252)
|..+ .++...+|.++.++ +.|.|+
T Consensus 435 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 463 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQRQAMA--MDFSWQ 463 (485)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHH--CCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh--hcCCHH
Confidence 5543 56677777776643 455553
No 15
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.00 E-value=0.017 Score=53.02 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=60.4
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCC---------ceEEEEcCCChhhHHHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE---------SFAVFVLERDIPNLKNI 199 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~---------~fsv~i~~~~~~~l~~~ 199 (252)
....+.++.+..++.|.-......-+.|||++|| |||.++.- ...+++.=. ...+.++..+..+|.+.
T Consensus 357 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~ 433 (485)
T 1rzu_A 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTG--GLADTVIDANHAALASKAATGVQFSPVTLDGLKQA 433 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHH
T ss_pred HHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCC--ChhheecccccccccccCCcceEeCCCCHHHHHHH
Confidence 3446889999999999766666788999999998 77777642 112333222 45566777787776665
Q ss_pred HhcC-----CHHHHHHHHHHHHHHhhhcee
Q 025504 200 LLSI-----SEKRYRKMQMMVKKVQQHFLW 224 (252)
Q Consensus 200 L~~i-----~~~~~~~m~~~~~~~~~~f~~ 224 (252)
|..+ .++...+|.++.++ +.|.|
T Consensus 434 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~ 461 (485)
T 1rzu_A 434 IRRTVRYYHDPKLWTQMQKLGMK--SDVSW 461 (485)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHT--CCCBH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH--HhCCh
Confidence 5543 56677777776643 44544
No 16
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=95.84 E-value=0.015 Score=52.23 Aligned_cols=135 Identities=12% Similarity=0.163 Sum_probs=84.6
Q ss_pred ceEEEeeccCCCCchHHHHHHhhcCCCCcEEeecCCCCC-CC---CcccCcchHHHhhccceEEEeec-CC------CCC
Q 025504 82 SILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAK-GR---GKRKGKTDYIQHMKSSKYCICAK-GY------EVH 150 (252)
Q Consensus 82 ~~L~~F~G~~~g~~R~~L~~~~~~~~~~~~v~~~~~~~~-g~---~~~~~~~~y~~~~~~S~FCL~p~-G~------~~~ 150 (252)
+..+.|+|++.- . ..+..+ ..+-.+.++|..+... .+ .+.....+..+.++++.|+|+.. |. ...
T Consensus 178 ~~~i~yaG~l~k-~--~~L~~l-~~~~~f~ivG~G~~~~l~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~ 253 (339)
T 3rhz_A 178 KREIHFPGNPER-F--SFVKEW-KYDIPLKVYTWQNVELPQNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYC 253 (339)
T ss_dssp EEEEEECSCTTT-C--GGGGGC-CCSSCEEEEESCCCCCCTTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCC
T ss_pred CcEEEEeCCcch-h--hHHHhC-CCCCeEEEEeCCcccCcCCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcC
Confidence 456789998752 1 111112 1223455666543221 01 11124567788888899999971 10 112
Q ss_pred ChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhhceeC
Q 025504 151 SPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFLWH 225 (252)
Q Consensus 151 s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~m~~~~~~~~~~f~~~ 225 (252)
...++|+|++|+ |||+++.-.++ +++.=....+.++ ++.++.+.|..++++++++|+++.++..+.+.++
T Consensus 254 P~Kl~eymA~G~-PVI~~~~~~~~--~~v~~~~~G~~~~--~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~~ 323 (339)
T 3rhz_A 254 SYKLGSFLAAGI-PVIVQEGIANQ--ELIENNGLGWIVK--DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRKG 323 (339)
T ss_dssp CHHHHHHHHHTC-CEEEETTCTTT--HHHHHHTCEEEES--SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHTT
T ss_pred hHHHHHHHHcCC-CEEEccChhHH--HHHHhCCeEEEeC--CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcc
Confidence 457999999997 99987743322 2232234455554 5778888899999999999999999988876543
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.81 E-value=0.055 Score=50.64 Aligned_cols=100 Identities=13% Similarity=0.195 Sum_probs=64.0
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEe-------cCCC-------CCCCCCCCCCCceEEEEcCCChh
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVII-------SDNF-------VPPFFEILNWESFAVFVLERDIP 194 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii-------~d~~-------~lPf~~~idw~~fsv~i~~~~~~ 194 (252)
.+..+.|+.+..++.|.-. ....-+.|||.+|+ |||. ++.- -+| +++. ++..
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~~--e~v~----------~~~~ 510 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGLD--EMNV----------ADDA 510 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTCG--GGBC----------SSHH
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCCh--hhhc----------CCHH
Confidence 4788999999999998766 56788999999997 9998 5422 221 2221 1444
Q ss_pred hHHHHHhcC--CHHHHHHHHHHHHHHh---hhceeCCCCCCcCHHHHHHHHHHHhh
Q 025504 195 NLKNILLSI--SEKRYRKMQMMVKKVQ---QHFLWHPRPVKYDIFHMILHSIWYNR 245 (252)
Q Consensus 195 ~l~~~L~~i--~~~~~~~m~~~~~~~~---~~f~~~~~~~~~daf~~~~~~l~~r~ 245 (252)
++.+.+..+ .++...+|+++.++.. +.|.|.. ..+.+..+.+++|.+.
T Consensus 511 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~---~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 511 AFVAKAVALASDPAALTALHARVDVLRRASGVFHMDG---FADDFGALLQALARRH 563 (568)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHH---HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHH---HHHHHHHHHHHHHHHH
Confidence 444443332 5677888888887665 6666542 2334455555665543
No 18
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=95.42 E-value=0.01 Score=53.07 Aligned_cols=94 Identities=13% Similarity=0.079 Sum_probs=63.1
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCC--------CCCce-------EE--EEcC
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL--------NWESF-------AV--FVLE 190 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~i--------dw~~f-------sv--~i~~ 190 (252)
..+..+.++.|..++.|.-......-+.|||++|| |||.++.-- +.+++ +.... .+ .++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~ 340 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGG--ADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGI 340 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHH--HHHHSCTTTSEEECCCEEEECTTTCSSCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCC--hHHHHccCcccccccccccccccccCcceeeCC
Confidence 45788899999999999766666788999999997 888887421 11222 11111 33 5566
Q ss_pred CChhhHHHHHhcC--CHHHHHHHHHHHHHHh-hhceeC
Q 025504 191 RDIPNLKNILLSI--SEKRYRKMQMMVKKVQ-QHFLWH 225 (252)
Q Consensus 191 ~~~~~l~~~L~~i--~~~~~~~m~~~~~~~~-~~f~~~ 225 (252)
.+..++.+.| .+ .++...+|.++.++.. +.|.|+
T Consensus 341 ~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~ 377 (413)
T 3oy2_A 341 IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWD 377 (413)
T ss_dssp CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHH
T ss_pred CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 6777666666 43 4667788888777664 567665
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.06 E-value=0.013 Score=53.63 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=60.8
Q ss_pred CcchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcCCH-
Q 025504 127 GKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISE- 205 (252)
Q Consensus 127 ~~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~- 205 (252)
...+..+.++.+..+++|.=....+.-+.|||++|| |||..+. - ..++++=.+-.+.++..+...|.+.|..+-+
T Consensus 304 ~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g--~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 304 TLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-E--NKDLSNWHSNIVSLEQLNPENIAETLVELCMS 379 (413)
T ss_dssp CHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-T--TBCGGGTBTTEEEESSCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-C--cchhhhcCCCEEEeCCCCHHHHHHHHHHHHcC
Confidence 356788999999999998643233567899999998 7776543 2 2355544556778888888877776665432
Q ss_pred HHHHHHHHHHHHHhhhceeCCCCC
Q 025504 206 KRYRKMQMMVKKVQQHFLWHPRPV 229 (252)
Q Consensus 206 ~~~~~m~~~~~~~~~~f~~~~~~~ 229 (252)
.+..+ + +.++..+.|.|+.--.
T Consensus 380 ~~~~~-~-~~~~~~~~~~W~~~~~ 401 (413)
T 2x0d_A 380 FNNRD-V-DKKESSNMMFYINEFN 401 (413)
T ss_dssp TC---------CCBSCGGGCCCC-
T ss_pred HHHHH-H-hHHHHHHhCCHHHHHH
Confidence 22222 1 3444455788876533
No 20
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=94.79 E-value=0.035 Score=49.67 Aligned_cols=92 Identities=15% Similarity=0.058 Sum_probs=61.7
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 206 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 206 (252)
.+..+.|+.+..++.|.-......-+.|||++|| |||.++.-- ..+++.=....+.++ +..++.+.|..+ .++
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHH
Confidence 3678899999999998755556788999999998 888877421 123332233444555 565555555443 577
Q ss_pred HHHHHHHHHHHHh-hhceeC
Q 025504 207 RYRKMQMMVKKVQ-QHFLWH 225 (252)
Q Consensus 207 ~~~~m~~~~~~~~-~~f~~~ 225 (252)
...+|.++.++.. +.|.|+
T Consensus 382 ~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 382 VSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHHcCHH
Confidence 7888888877654 467664
No 21
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=93.33 E-value=0.037 Score=48.77 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=49.2
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 205 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 205 (252)
..+..+.|+.+...+.|.|. . +.||+++|+ |||.++..- ...++++-. ..+.++. +..+|.+.+..+ .+
T Consensus 273 ~~~~~~~~~~ad~~v~~Sg~----~-~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDSGG----I-QEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHHHHHCSEEEESSST----G-GGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCcEEEECCcc----h-HHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh
Confidence 35678899999998888732 2 789999997 999887521 122334323 5566655 666666555543 45
Q ss_pred HHHHHHHH
Q 025504 206 KRYRKMQM 213 (252)
Q Consensus 206 ~~~~~m~~ 213 (252)
+...+|.+
T Consensus 344 ~~~~~~~~ 351 (384)
T 1vgv_A 344 NEYQAMSR 351 (384)
T ss_dssp HHHHHHHS
T ss_pred HHHhhhhh
Confidence 55555554
No 22
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.90 E-value=0.15 Score=48.25 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=55.2
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCC-C-CCce--------EEEEcCCChhhHH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-N-WESF--------AVFVLERDIPNLK 197 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~i-d-w~~f--------sv~i~~~~~~~l~ 197 (252)
.......++.|.+.++|.=..+...-+.|||++||.|| .++.--+| ++| | -+-| ...++..+...|.
T Consensus 392 ~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~~gG~~--e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 392 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CASTGGLV--DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECSCTHHH--HHCCBTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcCCCCch--heeeCCCCccccccCCCceeEECCCCHHHHH
Confidence 44556788999999999766667788999999998655 44421111 111 1 0011 1123344444443
Q ss_pred ----HHHhcCCHHHHHHHHHHHHHHhhhceeCC
Q 025504 198 ----NILLSISEKRYRKMQMMVKKVQQHFLWHP 226 (252)
Q Consensus 198 ----~~L~~i~~~~~~~m~~~~~~~~~~f~~~~ 226 (252)
+.|....++.+.+|+++. +.+.|.|+.
T Consensus 469 ~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 469 ATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 344444566778887765 346788864
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=91.91 E-value=0.095 Score=45.86 Aligned_cols=77 Identities=14% Similarity=0.047 Sum_probs=48.3
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 205 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 205 (252)
..+..+.|+.+.+++.|.| .-+.||+++|+ |||.++..- ...++++-. ..+.++. +..+|.+.|..+ ++
T Consensus 273 ~~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~-~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 273 VIDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTT-ERPEGIEAG-TLKLAGT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCC-SCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCC-CCceeecCC-ceEEcCC-CHHHHHHHHHHHHhCh
Confidence 3477889999999998862 23899999997 999885421 123344333 4555654 666665555443 35
Q ss_pred HHHHHHHH
Q 025504 206 KRYRKMQM 213 (252)
Q Consensus 206 ~~~~~m~~ 213 (252)
+..++|.+
T Consensus 344 ~~~~~~~~ 351 (375)
T 3beo_A 344 EAHDKMSK 351 (375)
T ss_dssp HHHHHHCC
T ss_pred HhHhhhhh
Confidence 44555543
No 24
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=90.78 E-value=0.27 Score=49.14 Aligned_cols=95 Identities=12% Similarity=0.065 Sum_probs=62.9
Q ss_pred chHHHhhc-cceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhc-----
Q 025504 129 TDYIQHMK-SSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS----- 202 (252)
Q Consensus 129 ~~y~~~~~-~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~----- 202 (252)
.+....++ .+..++.|.=......-+.|||++|| |||.++.-- ..+++.=....+.++..+...+.+.|..
T Consensus 655 ~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~L 731 (816)
T 3s28_A 655 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKC 731 (816)
T ss_dssp HHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHh
Confidence 34556666 45677777655556788999999998 788776322 2244433455677888787766655532
Q ss_pred -CCHHHHHHHHHHHHHHh-hhceeCC
Q 025504 203 -ISEKRYRKMQMMVKKVQ-QHFLWHP 226 (252)
Q Consensus 203 -i~~~~~~~m~~~~~~~~-~~f~~~~ 226 (252)
-.++...+|.++.++.. ++|.|+.
T Consensus 732 l~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 732 KEDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HHCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 15677888888887655 7787763
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.13 E-value=0.77 Score=42.89 Aligned_cols=92 Identities=11% Similarity=-0.077 Sum_probs=62.2
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCc----eeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhc-
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYEC----VPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS- 202 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GC----IPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~- 202 (252)
..+....++.+.-|++|.=......-..|||++|+ -|||+++..-. .+.++ -.+.|+..+...+.+.|..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l~---~g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANELT---SALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHhC---CeEEECCCCHHHHHHHHHHH
Confidence 55778889999999998655556678999999998 68888873211 12232 3567888887765544432
Q ss_pred --CCHHHHHHHHHHHHHHhhhcee
Q 025504 203 --ISEKRYRKMQMMVKKVQQHFLW 224 (252)
Q Consensus 203 --i~~~~~~~m~~~~~~~~~~f~~ 224 (252)
.++++.++|.+++++....|.+
T Consensus 417 L~~~~~~r~~~~~~~~~~v~~~s~ 440 (482)
T 1uqt_A 417 LTMSLAERISRHAEMLDVIVKNDI 440 (482)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHTCH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3566677777767665555543
No 26
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=85.79 E-value=0.69 Score=45.47 Aligned_cols=97 Identities=9% Similarity=0.183 Sum_probs=63.5
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCC------ceEEEEcC---CC----hhh
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE------SFAVFVLE---RD----IPN 195 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~------~fsv~i~~---~~----~~~ 195 (252)
.+|.+.++.+...+.|.=..+...-..||+++|+ |||.++.--++ +-+.+.. .-.+.|+. .+ +..
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~-d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG-SYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH-HHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh-hhhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 4799999999999999766667889999999997 66666532111 0011111 12333422 12 234
Q ss_pred HHHHHhc---CCHHHHHHHHHHHHHHhhhceeCCC
Q 025504 196 LKNILLS---ISEKRYRKMQMMVKKVQQHFLWHPR 227 (252)
Q Consensus 196 l~~~L~~---i~~~~~~~m~~~~~~~~~~f~~~~~ 227 (252)
|.+.|.. .++++..+|+++.+++.+.|.|+.-
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~i 622 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRM 622 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 5444443 4678888999999888899999753
No 27
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=84.25 E-value=3.6 Score=31.64 Aligned_cols=83 Identities=19% Similarity=0.157 Sum_probs=47.3
Q ss_pred HHhh--ccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCC-CCCCCCCceEEEEcCCC--hhhHHHHHhcCCH
Q 025504 132 IQHM--KSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSISE 205 (252)
Q Consensus 132 ~~~~--~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf-~~~idw~~fsv~i~~~~--~~~l~~~L~~i~~ 205 (252)
.+.| ..+...++..|. .-+.||+.+| +|+|+.+.. +.+. ...+.-....+.++..+ ..+|.+.++.+-.
T Consensus 79 ~~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp HHHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHc
Confidence 5566 777777776553 5799999999 588886532 0000 11233345677777663 3456555554421
Q ss_pred HHHHHHHHHHHHHhhh
Q 025504 206 KRYRKMQMMVKKVQQH 221 (252)
Q Consensus 206 ~~~~~m~~~~~~~~~~ 221 (252)
+ .+|+++.+++.+.
T Consensus 154 ~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 154 D--PSYKENVMKLSRI 167 (170)
T ss_dssp C--HHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHH
Confidence 1 1467766666554
No 28
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=81.82 E-value=2 Score=38.57 Aligned_cols=65 Identities=11% Similarity=0.211 Sum_probs=46.8
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHh-------hcCceeEEecCCCCCCCCCCCCCCceEEE-EcCCChhhHHHH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAI-------FYECVPVIISDNFVPPFFEILNWESFAVF-VLERDIPNLKNI 199 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal-------~~GCIPVii~d~~~lPf~~~idw~~fsv~-i~~~~~~~l~~~ 199 (252)
..+..+.++.+..++.|.-......-+.||+ ++|+ |||.++. +.+ ....+. ++..+..++.+.
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~-------v~~-~~~G~l~v~~~d~~~la~a 345 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA-------VVG-PYKSRFGYTPGNADSVIAA 345 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG-------GTC-SCSSEEEECTTCHHHHHHH
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh-------ccc-CcceEEEeCCCCHHHHHHH
Confidence 4577889999999999876555677899999 9996 9998876 222 233445 777777665555
Q ss_pred Hh
Q 025504 200 LL 201 (252)
Q Consensus 200 L~ 201 (252)
|.
T Consensus 346 i~ 347 (406)
T 2hy7_A 346 IT 347 (406)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=79.61 E-value=5 Score=35.42 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=54.4
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCC--C-------CCCCCceEEEEcCCCh--hhHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFF--E-------ILNWESFAVFVLERDI--PNLK 197 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~--~-------~idw~~fsv~i~~~~~--~~l~ 197 (252)
.+..+.|+.+..+++-.| ..-+.|++.+|. |+|+-+ +|+. + .+--...++.++++++ .+|.
T Consensus 244 ~dm~~~l~~aDlvI~raG----~~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~ 315 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRAG----ALTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELA 315 (365)
T ss_dssp SCHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCHHHHH
T ss_pred hhhhhhhccceEEEecCC----cchHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHH
Confidence 456789999999998766 345889999997 887632 2321 0 1223456888888775 3455
Q ss_pred HHHhcC--CHHHHHHHHHHHHHH
Q 025504 198 NILLSI--SEKRYRKMQMMVKKV 218 (252)
Q Consensus 198 ~~L~~i--~~~~~~~m~~~~~~~ 218 (252)
+.|..+ +++.+++|.++.+++
T Consensus 316 ~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 316 AQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHHCCHHHHHHHHHHHHhc
Confidence 555443 477888888877665
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=78.78 E-value=4.9 Score=36.00 Aligned_cols=94 Identities=14% Similarity=0.160 Sum_probs=55.1
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--C
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFFEILNWESFAVFVLERDIPNLKNILLSI--S 204 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 204 (252)
..++...|+.|.+.+.+.| +. ..||+.+|+ |||+.++. ..| +.++= ...+.++. +..+|.+.+..+ .
T Consensus 298 ~~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G~-PvV~~~~~~~~~--e~v~~-G~~~lv~~-d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDSG-GI----QEEAPSLGK-PVLVMRETTERP--EAVAA-GTVKLVGT-NQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHHHHHCSEEEESCS-GG----GTTGGGGTC-CEEECCSSCSCH--HHHHH-TSEEECTT-CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCEEEECCc-cH----HHHHHHcCC-CEEEccCCCcch--HHHHc-CceEEcCC-CHHHHHHHHHHHHcC
Confidence 3578899999999988876 21 279999996 99987432 222 33321 23455554 455555444433 4
Q ss_pred HHHHHHHHHHHHHHhhhceeCCCCCCcCHHHHHHHHH
Q 025504 205 EKRYRKMQMMVKKVQQHFLWHPRPVKYDIFHMILHSI 241 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~~~f~~~~~~~~~daf~~~~~~l 241 (252)
++..++|.++ ... | +..+|-..|++.|
T Consensus 368 ~~~~~~m~~~----~~~--~----~~~~aa~ri~~~l 394 (396)
T 3dzc_A 368 PQAYQAMSQA----HNP--Y----GDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHTS----CCT--T----CCSCHHHHHHHHH
T ss_pred HHHHHHHhhc----cCC--C----cCChHHHHHHHHH
Confidence 6666666552 111 2 4566776666654
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=75.18 E-value=6 Score=34.25 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=45.2
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 206 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 206 (252)
.+..+.|+.+...+.|.| +. +.||+++|+ |||+.+..- -..++++ ....+.++ .+..+|.+.+..+ +++
T Consensus 266 ~~~~~~~~~ad~~v~~S~----g~-~lEA~a~G~-PvI~~~~~~-~~~~~~~-~g~g~lv~-~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 266 GSMAALMRASLLLVTDSG----GL-QEEGAALGV-PVVVLRNVT-ERPEGLK-AGILKLAG-TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHTEEEEEESCH----HH-HHHHHHTTC-CEEECSSSC-SCHHHHH-HTSEEECC-SCHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhCcEEEECCc----CH-HHHHHHcCC-CEEeccCCC-cchhhhc-CCceEECC-CCHHHHHHHHHHHHhChH
Confidence 366789999998887752 22 779999998 888765321 1112232 22345554 3665555554443 455
Q ss_pred HHHHHHH
Q 025504 207 RYRKMQM 213 (252)
Q Consensus 207 ~~~~m~~ 213 (252)
..++|.+
T Consensus 337 ~~~~~~~ 343 (376)
T 1v4v_A 337 ELSRMRK 343 (376)
T ss_dssp HHHHHHH
T ss_pred hhhhhcc
Confidence 6666654
No 32
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=66.04 E-value=9.2 Score=26.12 Aligned_cols=46 Identities=11% Similarity=0.210 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHH----HHHHhhh-ceeCCCCCCcCHHHHHHHHHHHhhhhc
Q 025504 203 ISEKRYRKMQMM----VKKVQQH-FLWHPRPVKYDIFHMILHSIWYNRVFL 248 (252)
Q Consensus 203 i~~~~~~~m~~~----~~~~~~~-f~~~~~~~~~daf~~~~~~l~~r~~~~ 248 (252)
+++++.++||+- |.+++++ -.|+..+.+.|....-+.++..||+..
T Consensus 4 ls~~~~e~ir~IL~~NLykiRqr~~SYnRHtL~~d~~e~q~~EiLiRr~~s 54 (70)
T 2ygg_A 4 LSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKA 54 (70)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhccccccccCCCCchHHHHHHHHHHHHhh
Confidence 455555555543 3344333 568888889999999999999998864
No 33
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=66.02 E-value=18 Score=32.05 Aligned_cols=86 Identities=8% Similarity=0.022 Sum_probs=51.6
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCCC-CCCCCCceEEEEcCCC--hhhHHHHHhcCC
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERD--IPNLKNILLSIS 204 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf~-~~idw~~fsv~i~~~~--~~~l~~~L~~i~ 204 (252)
..+.+.|.++...+.-.|.+ -+.||+.+| +|+|+-... +.++. ..+......+.++..+ ..+|.+.++.+-
T Consensus 276 ~~~~~ll~~~d~~v~~gG~~----t~~Eal~~G-vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 276 VNHQVLFGRVAAVVHHGGAG----TTTAVTRAG-APQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATAL 350 (404)
T ss_dssp CCHHHHGGGSSEEEECCCHH----HHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT
T ss_pred CCHHHHHhhCcEEEECCcHH----HHHHHHHcC-CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHh
Confidence 45678999999888887753 478999999 588874321 01110 1133445666776554 345666555543
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 025504 205 EKRYRKMQMMVKKVQQHF 222 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~~~f 222 (252)
. .+++++.+++...+
T Consensus 351 ~---~~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 351 T---PGIRARAAAVAGTI 365 (404)
T ss_dssp S---HHHHHHHHHHHTTC
T ss_pred C---HHHHHHHHHHHHHH
Confidence 2 24566666666664
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=65.81 E-value=16 Score=32.65 Aligned_cols=94 Identities=17% Similarity=0.126 Sum_probs=53.2
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhcC--CHH
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 206 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 206 (252)
.++...|+.|.+.+.+.| +. ..||+.+|+ |||+..+.- -..+.++ ....+.++. +..+|.+.+..+ +++
T Consensus 293 ~~~~~l~~~ad~vv~~SG----g~-~~EA~a~g~-PvV~~~~~~-~~~e~v~-~g~~~lv~~-d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTDSG----GV-QEEAPGMGV-PVLVLRDTT-ERPEGIE-AGTLKLIGT-NKENLIKEALDLLDNKE 363 (403)
T ss_dssp HHHHHHHHHEEEEEECCH----HH-HHHGGGTTC-CEEECCSSC-SCHHHHH-HTSEEECCS-CHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhcCEEEECCc----cH-HHHHHHhCC-CEEEecCCC-cchhhee-CCcEEEcCC-CHHHHHHHHHHHHcCHH
Confidence 478899999998876653 11 279999995 999874321 0112232 223444543 555555444433 466
Q ss_pred HHHHHHHHHHHHhhhceeCCCCCCcCHHHHHHHHH
Q 025504 207 RYRKMQMMVKKVQQHFLWHPRPVKYDIFHMILHSI 241 (252)
Q Consensus 207 ~~~~m~~~~~~~~~~f~~~~~~~~~daf~~~~~~l 241 (252)
..++|.++ ... | +..+|-..|++.|
T Consensus 364 ~~~~m~~~----~~~--~----g~~~aa~rI~~~l 388 (403)
T 3ot5_A 364 SHDKMAQA----ANP--Y----GDGFAANRILAAI 388 (403)
T ss_dssp HHHHHHHS----CCT--T----CCSCHHHHHHHHH
T ss_pred HHHHHHhh----cCc--c----cCCcHHHHHHHHH
Confidence 66666542 222 2 3456777766655
No 35
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=63.16 E-value=16 Score=31.93 Aligned_cols=86 Identities=6% Similarity=-0.048 Sum_probs=50.1
Q ss_pred hHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCC-CCCCCCCceEEEEcCC--ChhhHHHHHhcC--
Q 025504 130 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLER--DIPNLKNILLSI-- 203 (252)
Q Consensus 130 ~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf-~~~idw~~fsv~i~~~--~~~~l~~~L~~i-- 203 (252)
+..+.|..+...+++.|. .-+.||+.+|+ |||+.+.. ..+. .+.+.-....+.++.. +..+|.+.|+.+
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G~-P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~ 375 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAGV-PQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA 375 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHTC-CEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhCC-CEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence 578999999988877663 35899999995 88874321 0000 0112223456667665 445555555443
Q ss_pred CHHHHHHHHHHHHHHhh
Q 025504 204 SEKRYRKMQMMVKKVQQ 220 (252)
Q Consensus 204 ~~~~~~~m~~~~~~~~~ 220 (252)
.++..++|.+..+++..
T Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 376 EESYRAGARAVAAEIAA 392 (412)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 35555555555444443
No 36
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=61.90 E-value=79 Score=27.35 Aligned_cols=83 Identities=11% Similarity=0.081 Sum_probs=48.3
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCC-CCCCCC---CCCCCCceEEEEcCCC--hhhHHHHHhc
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN-FVPPFF---EILNWESFAVFVLERD--IPNLKNILLS 202 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~-~~lPf~---~~idw~~fsv~i~~~~--~~~l~~~L~~ 202 (252)
....+.|..+...+...|. .-+.||+.+|+ |||+-.. ...+.. +.+......+.++..+ ...|.++|.
T Consensus 291 ~~~~~ll~~ad~~v~~~G~----~t~~Eal~~G~-P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~- 364 (398)
T 3oti_A 291 TPLHTLLRTCTAVVHHGGG----GTVMTAIDAGI-PQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIG- 364 (398)
T ss_dssp CCHHHHHTTCSEEEECCCH----HHHHHHHHHTC-CEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH-
T ss_pred CCHHHHHhhCCEEEECCCH----HHHHHHHHhCC-CEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc-
Confidence 3678889999887776554 35899999995 8887422 111111 1122234567777653 345666665
Q ss_pred CCHHHHHHHHHHHHHH
Q 025504 203 ISEKRYRKMQMMVKKV 218 (252)
Q Consensus 203 i~~~~~~~m~~~~~~~ 218 (252)
+++..++|++..+++
T Consensus 365 -~~~~~~~~~~~~~~~ 379 (398)
T 3oti_A 365 -DESLRTAAREVREEM 379 (398)
T ss_dssp -CHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHH
Confidence 355455555544443
No 37
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=45.24 E-value=38 Score=31.63 Aligned_cols=90 Identities=12% Similarity=0.120 Sum_probs=56.0
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcC--ceeEEecCCCCCCCCCCCCCCceEEEEcCCChhhHHHHHhc---
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYE--CVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS--- 202 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~G--CIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~--- 202 (252)
..++...++.|.-|++|.=.....--..|||++| --|||+++.-=.+ +.+ .+-++.|+..+...+.+.|..
T Consensus 362 ~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~--~~l--~~~allVnP~D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAA--EVL--GEYCRSVNPFDLVEQAEAISAALA 437 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTH--HHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCH--HHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence 4567888999999999864444456788999986 2467777632110 111 123678888888766555433
Q ss_pred CCHHHHHHHHHHHHHHhhh
Q 025504 203 ISEKRYRKMQMMVKKVQQH 221 (252)
Q Consensus 203 i~~~~~~~m~~~~~~~~~~ 221 (252)
+++++..++.+++.+....
T Consensus 438 m~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDAARP 456 (496)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 4666655555555554443
No 38
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=44.97 E-value=16 Score=32.12 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=29.7
Q ss_pred chHHHhhccceEEEeecCCC-CCChhHHHHhhcCceeEEecCC
Q 025504 129 TDYIQHMKSSKYCICAKGYE-VHSPRVVEAIFYECVPVIISDN 170 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~-~~s~rl~eal~~GCIPVii~d~ 170 (252)
.+..+.|+.+..+++|.... ....-+.||+++|| |||.+++
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-PVI~~~~ 310 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-PVIYGPY 310 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTC-CEEECSC
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCC-CEEECCC
Confidence 56788999999877765332 22356999999998 8887643
No 39
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=40.61 E-value=28 Score=30.55 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=46.2
Q ss_pred HHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCC-CCCCCCCceEEEEcCC--ChhhHHHHHhcC--CH
Q 025504 132 IQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLER--DIPNLKNILLSI--SE 205 (252)
Q Consensus 132 ~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf-~~~idw~~fsv~i~~~--~~~~l~~~L~~i--~~ 205 (252)
.+.|..+...+...|. ..+.||+.+| +|||+.+.. +.++ .+.+......+.++.+ +..+|.+.++.+ ++
T Consensus 294 ~~~l~~ad~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 368 (430)
T 2iyf_A 294 LAILRQADLFVTHAGA----GGSQEGLATA-TPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDP 368 (430)
T ss_dssp HHHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred HHHhhccCEEEECCCc----cHHHHHHHhC-CCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence 3788888876665543 4599999999 588876431 0000 0112223556777765 345555555443 34
Q ss_pred HHHHHHHHHHHHHh
Q 025504 206 KRYRKMQMMVKKVQ 219 (252)
Q Consensus 206 ~~~~~m~~~~~~~~ 219 (252)
+..++|.+..+++.
T Consensus 369 ~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 369 EVARRLRRIQAEMA 382 (430)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44445555444433
No 40
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=37.02 E-value=46 Score=21.58 Aligned_cols=40 Identities=8% Similarity=0.246 Sum_probs=30.1
Q ss_pred CceEEEEcCCChhhHHHHHhcCCH-HHHHHHHHHHHHHhhh
Q 025504 182 ESFAVFVLERDIPNLKNILLSISE-KRYRKMQMMVKKVQQH 221 (252)
Q Consensus 182 ~~fsv~i~~~~~~~l~~~L~~i~~-~~~~~m~~~~~~~~~~ 221 (252)
.+-.+.|..+|.++|.++|+++|. ..-+..|+++++....
T Consensus 25 tkhllkikkedypqifdflenvprgtktahirealrryiee 65 (70)
T 2q2k_A 25 TKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIEE 65 (70)
T ss_dssp EEEEEEEETTTSHHHHHHHTTSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhchHHHHHHHcCCCccchHHHHHHHHHHHHH
Confidence 355688999999999999999984 3455667777666544
No 41
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=35.71 E-value=54 Score=31.68 Aligned_cols=109 Identities=5% Similarity=0.038 Sum_probs=64.2
Q ss_pred cchHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCCCCCCCCC--------CCCCceEEEEcCCChhhHHHH
Q 025504 128 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEI--------LNWESFAVFVLERDIPNLKNI 199 (252)
Q Consensus 128 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~~lPf~~~--------idw~~fsv~i~~~~~~~l~~~ 199 (252)
..+|.+.+..+.-+|-|.-.+ +..-..|||.+| +|||...+-.+. +. +.-.++.|.-.+++..++.-.
T Consensus 509 ~~e~la~y~~aDIfLDpfpy~-GgtTtlEALwmG-VPVVTl~G~~~a--sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~ 584 (631)
T 3q3e_A 509 YHQYLRILHNCDMMVNPFPFG-NTNGIIDMVTLG-LVGVCKTGAEVH--EHIDEGLFKRLGLPEWLIANTVDEYVERAVR 584 (631)
T ss_dssp HHHHHHHHHTCSEEECCSSSC-CSHHHHHHHHTT-CCEEEECCSSHH--HHHHHHHHHHTTCCGGGEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCcEEEeCCccc-CChHHHHHHHcC-CCEEeccCCcHH--HHhHHHHHHhcCCCcceecCCHHHHHHHHHH
Confidence 567888899999999986554 367899999999 588875432100 00 011111111122222222222
Q ss_pred HhcCCHHHHHHHHHHHHHHhh-hceeCCCCCCcCHHHHHHHHHHHh
Q 025504 200 LLSISEKRYRKMQMMVKKVQQ-HFLWHPRPVKYDIFHMILHSIWYN 244 (252)
Q Consensus 200 L~~i~~~~~~~m~~~~~~~~~-~f~~~~~~~~~daf~~~~~~l~~r 244 (252)
|.+ .++.+++||+++++-.. .-+|+ +....|...++++|.+
T Consensus 585 La~-D~~~l~~LR~~Lr~~~~~spLFd---~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 585 LAE-NHQERLELRRYIIENNGLNTLFT---GDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHH-CHHHHHHHHHHHHHSCCHHHHTC---SCCTHHHHHHHHHHHH
T ss_pred HhC-CHHHHHHHHHHHHHHhhhCCCcc---hhHHHHHHHHHHHHHH
Confidence 222 57889999999886643 23344 4556677777777665
No 42
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=33.60 E-value=30 Score=20.97 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHh
Q 025504 205 EKRYRKMQMMVKKVQ 219 (252)
Q Consensus 205 ~~~~~~m~~~~~~~~ 219 (252)
++++.+||.+|..++
T Consensus 25 Eedi~~MqsRLaALR 39 (40)
T 2xze_Q 25 EEALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 467899999998664
No 43
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=30.66 E-value=39 Score=29.71 Aligned_cols=85 Identities=12% Similarity=0.008 Sum_probs=51.8
Q ss_pred hHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCCC-CCCCCCceEEEEcCCC--hhhHHHHHhcCCH
Q 025504 130 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERD--IPNLKNILLSISE 205 (252)
Q Consensus 130 ~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf~-~~idw~~fsv~i~~~~--~~~l~~~L~~i~~ 205 (252)
...+.|.++...++..|. ..+.||+.+| +|+|+-+.. +.++. ..+......+.++.++ ..+|.+.++.+ .
T Consensus 294 ~~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~ 367 (415)
T 1iir_A 294 NHQVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-L 367 (415)
T ss_dssp CHHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-T
T ss_pred ChHHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-c
Confidence 346778999988887664 4699999999 577775421 11100 1133345667777553 34677777766 3
Q ss_pred HHHHHHHHHHHHHhhhc
Q 025504 206 KRYRKMQMMVKKVQQHF 222 (252)
Q Consensus 206 ~~~~~m~~~~~~~~~~f 222 (252)
+ .+++++.++..+.+
T Consensus 368 ~--~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 368 T--PETHARATAVAGTI 382 (415)
T ss_dssp S--HHHHHHHHHHHHHS
T ss_pred C--HHHHHHHHHHHHHH
Confidence 2 24555666666554
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=30.40 E-value=68 Score=28.37 Aligned_cols=68 Identities=9% Similarity=-0.037 Sum_probs=41.6
Q ss_pred HHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCC-CCCCCCCceEEEEcCCC--hhhHHHHHhcC
Q 025504 131 YIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSI 203 (252)
Q Consensus 131 y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf-~~~idw~~fsv~i~~~~--~~~l~~~L~~i 203 (252)
..+.|..+...++..|. ..+.||+.+| +|+|+.+.. +.++ ...+......+.++.++ ..+|.+.|+.+
T Consensus 329 ~~~ll~~ad~~V~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 329 MHALLPTCAATVHHGGP----GSWHTAAIHG-VPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp HHHHGGGCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEECCCH----HHHHHHHHhC-CCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHH
Confidence 46788999988886663 4589999999 588775431 0111 01233345667777653 34565555544
No 45
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=25.70 E-value=50 Score=28.97 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=52.4
Q ss_pred hHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCCC-CCCCCCceEEEEcCCC--hhhHHHHHhcCCH
Q 025504 130 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERD--IPNLKNILLSISE 205 (252)
Q Consensus 130 ~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf~-~~idw~~fsv~i~~~~--~~~l~~~L~~i~~ 205 (252)
...+.|.++...++-.|. ..+.||+.+| +|+|+-+.. +.++. ..+......+.++.++ ..+|.+.++.+ .
T Consensus 295 ~~~~ll~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~ 368 (416)
T 1rrv_A 295 NFQALFRRVAAVIHHGSA----GTEHVATRAG-VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-L 368 (416)
T ss_dssp CHHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-T
T ss_pred ChHHHhccCCEEEecCCh----hHHHHHHHcC-CCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-h
Confidence 457788888888886553 4799999999 588774321 11110 0123345666776543 34677777776 3
Q ss_pred HHHHHHHHHHHHHhhhce
Q 025504 206 KRYRKMQMMVKKVQQHFL 223 (252)
Q Consensus 206 ~~~~~m~~~~~~~~~~f~ 223 (252)
+. +++++.+++.+.+.
T Consensus 369 ~~--~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 369 AP--ETRARAEAVAGMVL 384 (416)
T ss_dssp SH--HHHHHHHHHTTTCC
T ss_pred CH--HHHHHHHHHHHHHh
Confidence 32 56666666666654
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=23.79 E-value=47 Score=29.13 Aligned_cols=68 Identities=13% Similarity=0.189 Sum_probs=40.0
Q ss_pred HHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCCC-CCCCCCceEEEEcCC--ChhhHHHHHhcC
Q 025504 131 YIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLER--DIPNLKNILLSI 203 (252)
Q Consensus 131 y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf~-~~idw~~fsv~i~~~--~~~~l~~~L~~i 203 (252)
..+.|..+...++-.|. ..+.||+.+| +|+|+.+.. +.++. ..+......+.++.+ +..+|.+.++.+
T Consensus 315 ~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 315 QLDILTKASAFITHAGM----GSTMEALSNA-VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp HHHHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEECCch----hHHHHHHHcC-CCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 34788889876665442 4699999999 588875532 11110 112234566777655 334566555554
No 47
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=21.34 E-value=75 Score=16.89 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHhhh
Q 025504 207 RYRKMQMMVKKVQQH 221 (252)
Q Consensus 207 ~~~~m~~~~~~~~~~ 221 (252)
+++.+|++++++++.
T Consensus 9 eledlqerlrklrkk 23 (27)
T 3twe_A 9 ELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445566666666554
No 48
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=21.28 E-value=1.8e+02 Score=24.87 Aligned_cols=85 Identities=8% Similarity=-0.022 Sum_probs=44.6
Q ss_pred chHHHhhccceEEEeecCCCCCChhHHHHhhcCceeEEecCCC-CCCC-CCCCCCCceEEEEcCCC--hhhHHHHHhcC-
Q 025504 129 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSI- 203 (252)
Q Consensus 129 ~~y~~~~~~S~FCL~p~G~~~~s~rl~eal~~GCIPVii~d~~-~lPf-~~~idw~~fsv~i~~~~--~~~l~~~L~~i- 203 (252)
..+.+.|..+..++...|. .-+.||+.+|+ |||+.... ..+. .+.+......+.++.++ ...|.+.++.+
T Consensus 292 ~~~~~ll~~ad~~v~~gG~----~t~~Ea~~~G~-P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll 366 (398)
T 4fzr_A 292 FPLSAIMPACDVVVHHGGH----GTTLTCLSEGV-PQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIR 366 (398)
T ss_dssp CCHHHHGGGCSEEEECCCH----HHHHHHHHTTC-CEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHH
T ss_pred CCHHHHHhhCCEEEecCCH----HHHHHHHHhCC-CEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH
Confidence 3578899999998877663 35899999995 88874321 0110 01123344566666542 23344333332
Q ss_pred -CHHHHHHHHHHHHHH
Q 025504 204 -SEKRYRKMQMMVKKV 218 (252)
Q Consensus 204 -~~~~~~~m~~~~~~~ 218 (252)
.++..++|++..+++
T Consensus 367 ~~~~~~~~~~~~~~~~ 382 (398)
T 4fzr_A 367 DDSSYVGNARRLAAEM 382 (398)
T ss_dssp HCTHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHH
Confidence 344444554444333
Done!