Query 025505
Match_columns 252
No_of_seqs 218 out of 4428
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 11:40:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.5E-37 8.5E-42 227.9 15.7 159 18-194 6-164 (169)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 3.5E-35 1.2E-39 230.5 16.6 176 2-194 43-218 (253)
3 2f8y_A Notch homolog 1, transl 100.0 1.4E-34 5E-39 222.6 18.3 177 1-194 10-186 (223)
4 1ikn_D Protein (I-kappa-B-alph 100.0 1E-34 3.4E-39 225.5 17.2 177 8-201 37-219 (236)
5 3hra_A Ankyrin repeat family p 100.0 8.1E-35 2.8E-39 220.5 15.1 171 2-189 25-201 (201)
6 3aji_A 26S proteasome non-ATPa 100.0 1.3E-34 4.4E-39 224.0 16.5 175 2-194 26-200 (231)
7 2rfm_A Putative ankyrin repeat 100.0 4.1E-35 1.4E-39 220.7 13.1 167 6-190 25-191 (192)
8 1oy3_D Transcription factor in 100.0 2E-34 6.7E-39 229.2 15.9 173 6-195 35-254 (282)
9 2rfa_A Transient receptor pote 100.0 3.9E-34 1.3E-38 221.5 16.0 177 2-195 23-226 (232)
10 3v31_A Ankyrin repeat family A 100.0 7.4E-34 2.5E-38 209.2 16.4 163 15-195 2-164 (167)
11 4b93_B Ankyrin repeat domain-c 100.0 1.1E-34 3.6E-39 229.7 12.7 167 8-192 78-245 (269)
12 2dzn_A Probable 26S proteasome 100.0 8.9E-34 3E-38 218.8 16.7 177 2-194 22-203 (228)
13 1oy3_D Transcription factor in 100.0 8.9E-34 3E-38 225.4 14.5 175 8-194 1-220 (282)
14 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.6E-34 2.9E-38 207.7 13.0 159 14-191 3-162 (162)
15 1k1a_A B-cell lymphoma 3-encod 100.0 5E-33 1.7E-37 216.3 17.4 173 5-194 35-211 (241)
16 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.1E-33 7.1E-38 207.2 14.4 162 10-189 8-169 (169)
17 2f8y_A Notch homolog 1, transl 100.0 4.1E-33 1.4E-37 214.4 16.5 171 7-195 49-220 (223)
18 3utm_A Tankyrase-1; tankyrase, 100.0 7.3E-33 2.5E-37 226.5 18.3 181 2-194 44-308 (351)
19 3v30_A DNA-binding protein rfx 100.0 4.2E-33 1.5E-37 206.1 15.3 162 16-194 2-163 (172)
20 3aji_A 26S proteasome non-ATPa 100.0 4.2E-33 1.4E-37 215.5 15.7 168 7-192 64-231 (231)
21 3b7b_A Euchromatic histone-lys 100.0 7.2E-33 2.5E-37 215.0 16.8 169 9-194 37-205 (237)
22 2rfa_A Transient receptor pote 100.0 1.7E-32 5.9E-37 212.2 18.2 162 15-193 2-185 (232)
23 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-33 4.9E-38 221.3 12.1 170 9-194 3-185 (253)
24 2xai_A ASB-9, ankyrin repeat a 100.0 9.6E-33 3.3E-37 217.6 16.1 167 8-194 28-194 (261)
25 3twr_A Tankyrase-2; ankyrin re 100.0 4.5E-33 1.5E-37 204.5 12.9 161 12-190 4-164 (165)
26 2etb_A Transient receptor pote 100.0 1.5E-33 5.1E-38 221.5 10.7 166 12-194 39-249 (256)
27 4hbd_A KN motif and ankyrin re 100.0 4.3E-33 1.5E-37 221.3 13.4 165 8-189 103-273 (276)
28 3f6q_A Integrin-linked protein 100.0 2.2E-32 7.6E-37 203.5 16.1 163 14-194 3-166 (179)
29 4b93_B Ankyrin repeat domain-c 100.0 3.4E-33 1.2E-37 221.0 12.3 169 8-194 44-213 (269)
30 3kea_A K1L; tropism, ANK repea 100.0 1.7E-32 5.7E-37 218.9 15.5 164 9-193 24-188 (285)
31 3d9h_A CDNA FLJ77766, highly s 100.0 2.8E-32 9.7E-37 217.6 16.3 166 9-193 52-217 (285)
32 3b7b_A Euchromatic histone-lys 100.0 3.5E-32 1.2E-36 211.1 16.2 169 9-194 4-172 (237)
33 3d9h_A CDNA FLJ77766, highly s 100.0 4.5E-32 1.5E-36 216.5 16.8 167 8-194 84-250 (285)
34 2pnn_A Transient receptor pote 100.0 9E-33 3.1E-37 219.1 12.5 167 11-194 49-262 (273)
35 2xai_A ASB-9, ankyrin repeat a 100.0 3.2E-32 1.1E-36 214.6 15.5 161 15-194 2-162 (261)
36 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-33 8.9E-38 217.5 8.9 173 10-194 2-179 (236)
37 1k1a_A B-cell lymphoma 3-encod 100.0 9.5E-32 3.2E-36 209.0 17.7 173 8-194 1-178 (241)
38 3jxi_A Vanilloid receptor-rela 100.0 6.8E-33 2.3E-37 218.1 10.8 166 13-195 43-254 (260)
39 1awc_B Protein (GA binding pro 100.0 4.2E-32 1.4E-36 197.0 13.2 151 16-185 2-152 (153)
40 1wdy_A 2-5A-dependent ribonucl 100.0 1.8E-31 6.1E-36 212.1 16.6 171 9-194 98-281 (285)
41 3ljn_A Hypothetical protein; a 100.0 5.4E-32 1.9E-36 223.1 14.1 170 9-193 46-238 (364)
42 3ljn_A Hypothetical protein; a 100.0 6.1E-32 2.1E-36 222.8 14.1 170 12-193 80-271 (364)
43 1s70_B 130 kDa myosin-binding 100.0 1.4E-31 4.9E-36 214.6 15.5 170 13-194 37-260 (299)
44 2fo1_E LIN-12 protein; beta-ba 100.0 8.9E-32 3E-36 222.6 14.4 180 5-194 155-341 (373)
45 3hra_A Ankyrin repeat family p 100.0 6.4E-31 2.2E-35 199.0 17.6 169 13-194 2-173 (201)
46 2dzn_A Probable 26S proteasome 100.0 4.2E-31 1.4E-35 203.8 16.5 163 16-194 2-169 (228)
47 4gpm_A Engineered protein OR26 100.0 2.4E-31 8.4E-36 195.8 13.9 137 7-157 28-164 (169)
48 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.7E-31 5.7E-36 194.3 12.6 153 16-188 2-155 (156)
49 1n11_A Ankyrin; clathrin, BAND 100.0 4.4E-31 1.5E-35 222.6 16.8 168 9-194 205-372 (437)
50 1wdy_A 2-5A-dependent ribonucl 100.0 9.9E-31 3.4E-35 207.8 17.1 179 3-194 26-214 (285)
51 1n11_A Ankyrin; clathrin, BAND 100.0 9.4E-31 3.2E-35 220.6 17.0 169 8-194 6-174 (437)
52 2etb_A Transient receptor pote 100.0 6.7E-31 2.3E-35 206.3 13.4 165 15-193 1-208 (256)
53 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.4E-31 4.8E-36 208.3 9.3 163 13-194 2-167 (239)
54 1s70_B 130 kDa myosin-binding 100.0 1E-30 3.5E-35 209.6 14.4 161 9-188 66-286 (299)
55 2fo1_E LIN-12 protein; beta-ba 100.0 5.6E-31 1.9E-35 217.8 13.0 168 7-192 190-372 (373)
56 2pnn_A Transient receptor pote 100.0 3.8E-31 1.3E-35 209.7 11.4 172 8-194 5-221 (273)
57 3eu9_A Huntingtin-interacting 100.0 1.3E-30 4.6E-35 202.1 13.9 170 8-194 34-205 (240)
58 1sw6_A Regulatory protein SWI6 100.0 9.5E-31 3.3E-35 212.7 13.2 170 6-194 120-311 (327)
59 4g8k_A 2-5A-dependent ribonucl 100.0 3E-30 1E-34 210.5 15.6 172 8-194 117-301 (337)
60 3eu9_A Huntingtin-interacting 100.0 4.5E-30 1.6E-34 199.1 14.9 172 10-197 3-174 (240)
61 3v30_A DNA-binding protein rfx 100.0 3.3E-30 1.1E-34 190.5 12.2 150 2-165 22-171 (172)
62 2vge_A RELA-associated inhibit 100.0 1.9E-31 6.3E-36 206.2 4.4 167 6-184 11-206 (229)
63 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-29 4.9E-34 206.5 14.9 164 9-195 161-330 (337)
64 3utm_A Tankyrase-1; tankyrase, 100.0 2.6E-29 8.8E-34 205.4 14.7 174 9-194 17-275 (351)
65 3jxi_A Vanilloid receptor-rela 100.0 8.5E-30 2.9E-34 200.4 11.4 173 13-194 2-213 (260)
66 1bi7_B P16INK4A, MTS1, multipl 100.0 5.1E-30 1.7E-34 186.6 9.0 146 9-169 5-151 (156)
67 1d9s_A Cyclin-dependent kinase 100.0 3.3E-29 1.1E-33 178.1 10.7 127 46-190 8-135 (136)
68 3kea_A K1L; tropism, ANK repea 100.0 8.7E-29 3E-33 197.4 13.2 161 15-195 61-224 (285)
69 1d9s_A Cyclin-dependent kinase 100.0 3.4E-29 1.2E-33 178.0 9.6 127 9-144 5-132 (136)
70 3t8k_A Uncharacterized protein 100.0 2.1E-29 7.1E-34 188.4 7.4 161 16-194 6-182 (186)
71 3f6q_A Integrin-linked protein 100.0 1.8E-28 6.2E-33 182.3 10.9 146 2-161 25-170 (179)
72 4hbd_A KN motif and ankyrin re 100.0 1.2E-28 4.2E-33 195.6 9.6 165 13-194 73-245 (276)
73 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-27 3.7E-32 175.1 13.0 129 8-144 30-158 (162)
74 3twr_A Tankyrase-2; ankyrin re 99.9 1E-27 3.5E-32 175.9 11.6 134 2-144 28-161 (165)
75 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.6E-27 1.2E-31 173.7 13.9 129 8-144 39-167 (169)
76 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-27 5.4E-32 169.4 11.5 127 10-144 8-134 (136)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.1E-27 1.1E-31 171.6 12.4 129 6-144 26-154 (156)
78 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.3E-27 1.8E-31 164.0 12.6 123 15-145 1-123 (126)
79 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.7E-27 2.3E-31 163.5 12.5 126 49-191 1-126 (126)
80 1awc_B Protein (GA binding pro 99.9 5E-27 1.7E-31 170.1 11.9 123 12-142 30-152 (153)
81 3v31_A Ankyrin repeat family A 99.9 6.7E-27 2.3E-31 171.8 12.8 131 6-144 26-156 (167)
82 2rfm_A Putative ankyrin repeat 99.9 1.7E-26 5.9E-31 173.5 13.8 129 8-144 60-188 (192)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 3.9E-27 1.3E-31 167.3 9.7 127 46-189 10-136 (136)
84 3c5r_A BARD-1, BRCA1-associate 99.9 2.8E-27 9.7E-32 168.2 8.9 129 46-191 6-134 (137)
85 3deo_A Signal recognition part 99.9 1.8E-26 6.2E-31 172.2 11.8 142 11-188 39-181 (183)
86 3ui2_A Signal recognition part 99.9 1.4E-26 4.8E-31 180.6 11.4 145 11-191 40-185 (244)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 3.2E-27 1.1E-31 171.7 6.8 132 46-195 8-140 (156)
88 2vge_A RELA-associated inhibit 99.9 3.8E-26 1.3E-30 176.4 12.9 147 32-195 1-152 (229)
89 3c5r_A BARD-1, BRCA1-associate 99.9 6.1E-27 2.1E-31 166.5 7.2 126 11-144 5-130 (137)
90 3ehr_A Osteoclast-stimulating 99.9 8.3E-27 2.8E-31 179.2 7.7 141 9-162 66-206 (222)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-26 3.5E-31 180.8 8.1 151 13-171 34-190 (239)
92 2aja_A Ankyrin repeat family p 99.9 1E-27 3.4E-32 197.5 0.9 160 10-193 86-252 (376)
93 1sw6_A Regulatory protein SWI6 99.9 1.7E-26 5.9E-31 187.6 8.0 145 6-171 154-325 (327)
94 3aaa_C Myotrophin, protein V-1 99.9 7.8E-26 2.7E-30 157.8 9.1 117 13-137 4-120 (123)
95 3t8k_A Uncharacterized protein 99.9 2E-26 7E-31 172.1 5.8 127 10-144 31-175 (186)
96 2b0o_E UPLC1; arfgap, structur 99.9 4.6E-25 1.6E-29 177.0 11.2 137 16-171 151-295 (301)
97 3aaa_C Myotrophin, protein V-1 99.9 3.5E-25 1.2E-29 154.5 9.1 113 46-171 3-115 (123)
98 3jue_A Arfgap with coiled-coil 99.9 1.1E-24 3.6E-29 178.9 12.4 151 10-171 193-346 (368)
99 3ehr_A Osteoclast-stimulating 99.9 2.8E-25 9.6E-30 170.7 7.8 167 11-194 20-201 (222)
100 3deo_A Signal recognition part 99.9 1.6E-26 5.6E-31 172.4 -1.2 128 47-192 41-169 (183)
101 1dcq_A PYK2-associated protein 99.9 2E-23 6.9E-28 165.6 15.6 168 11-194 61-266 (278)
102 3lvq_E ARF-GAP with SH3 domain 99.9 4E-23 1.4E-27 176.7 12.0 135 16-169 132-274 (497)
103 2aja_A Ankyrin repeat family p 99.9 5.5E-25 1.9E-29 181.2 -0.2 121 11-147 123-249 (376)
104 3ui2_A Signal recognition part 99.9 4.8E-25 1.6E-29 171.8 -0.7 140 14-171 13-153 (244)
105 1dcq_A PYK2-associated protein 99.9 1.5E-22 5.2E-27 160.6 12.4 124 16-146 130-261 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-22 3.7E-27 134.7 9.6 92 15-108 1-92 (93)
107 2b0o_E UPLC1; arfgap, structur 99.9 3.5E-22 1.2E-26 160.2 14.3 126 50-192 151-285 (301)
108 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-22 6.5E-27 172.5 12.2 128 50-194 132-268 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.1E-22 7.2E-27 133.3 8.3 88 50-144 2-89 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.9 7.8E-23 2.7E-27 140.7 6.4 108 11-126 4-111 (115)
111 3jue_A Arfgap with coiled-coil 99.9 4.4E-22 1.5E-26 163.3 10.7 128 49-193 198-328 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.9 1.9E-22 6.5E-27 138.8 6.1 108 46-166 5-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.9E-20 6.6E-25 127.7 9.5 99 3-103 11-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 4.3E-19 1.5E-23 121.0 7.9 90 46-142 20-109 (110)
115 1gp8_A Protein (scaffolding pr 58.6 9.1 0.00031 19.5 2.4 18 20-37 17-34 (40)
116 3zrh_A Ubiquitin thioesterase 47.4 47 0.0016 27.2 6.1 49 24-72 30-91 (454)
117 3le4_A Microprocessor complex 24.7 13 0.00045 22.0 -0.3 17 236-252 28-44 (79)
118 3gvo_A Pumilio 2, pumilio homo 21.5 1E+02 0.0035 24.3 4.3 93 12-104 69-165 (351)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.5e-37 Score=227.87 Aligned_cols=159 Identities=25% Similarity=0.364 Sum_probs=148.1
Q ss_pred hHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCCh
Q 025505 18 TTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRS 97 (252)
Q Consensus 18 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~ 97 (252)
++|+.||..|+.++|+.|++.|++++. .|..|.||||+|+..++.+++++|++++ .+++.+|..|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCH
Confidence 479999999999999999999999998 9999999999999999999999999999 78999999999999999999999
Q ss_pred HHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCch
Q 025505 98 DAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSA 177 (252)
Q Consensus 98 ~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 177 (252)
+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .+
T Consensus 84 ~~v~~Ll~~ga------dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~----~g 147 (169)
T 4gpm_A 84 EVVKLLISKGA------DVNAKDSDGRTPLHHAAENGHKEVVKLLIS------KGADVNTSDSDGRTPLDLARE----HG 147 (169)
T ss_dssp HHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----TT
T ss_pred HHHHHHHHCcC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHH----cC
Confidence 99999999999 899999999999999999999999999996 889999999999999999999 88
Q ss_pred hHHHHHHHHHhccccCC
Q 025505 178 FKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 178 ~~~~~~~L~~~ga~~~~ 194 (252)
+.+++++|+++||+++.
T Consensus 148 ~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHHTC------
T ss_pred CHHHHHHHHHCCCCcCC
Confidence 99999999999999864
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.5e-35 Score=230.53 Aligned_cols=176 Identities=20% Similarity=0.226 Sum_probs=160.0
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
++..+++.+..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++++.+++..+
T Consensus 43 l~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 121 (253)
T 1yyh_A 43 IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121 (253)
T ss_dssp ---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC
T ss_pred HHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 4555666677799999999999999999999999999999987 899999999999999999999999999966889999
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
..|.||||+|+..++.+++++|++.+. +++..+..|+||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~ 189 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHA------DVNAVDDLGKSALHWAAAVNNVDAAVVLLK------NGANKDMQNNR 189 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTC------CTTCBCTTSCBHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTT
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCC
Confidence 999999999999999999999999998 789999999999999999999999999996 88999999999
Q ss_pred CCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 162 GQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 162 g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|.||||+|+. .++.+++++|+++|++++.
T Consensus 190 g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 190 EETPLFLAAR----EGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp SCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHH----CCCHHHHHHHHHcCCCccc
Confidence 9999999998 8899999999999999875
No 3
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.4e-34 Score=222.55 Aligned_cols=177 Identities=20% Similarity=0.228 Sum_probs=165.6
Q ss_pred CcccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccc
Q 025505 1 MARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKL 80 (252)
Q Consensus 1 il~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 80 (252)
||+..+++....|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++++..++..
T Consensus 10 Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 88 (223)
T 2f8y_A 10 FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 88 (223)
T ss_dssp TEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCC
T ss_pred HHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 35566676677799999999999999999999999999999987 89999999999999999999999999997688999
Q ss_pred CCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccC
Q 025505 81 TSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK 160 (252)
Q Consensus 81 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 160 (252)
+..|.||||+|+..++.+++++|++.+. +++..+..|+||||+|+..++.+++++|++ .|++++.+|.
T Consensus 89 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~ 156 (223)
T 2f8y_A 89 MHDGTTPLILAARLAVEGMLEDLINSHA------DVNAVDDLGKSALHWAAAVNNVDAAVVLLK------NGANKDMQNN 156 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTC------CTTCBCTTSCBHHHHHHHTTCHHHHHHHHH------TTCCTTCCCT
T ss_pred CCCCCcHHHHHHHhCcHHHHHHHHHcCC------CCcCcCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCC
Confidence 9999999999999999999999999988 788999999999999999999999999996 7899999999
Q ss_pred CCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 161 EGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 161 ~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.|.||||+|+. .++.+++++|+++|++++.
T Consensus 157 ~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 157 REETPLFLAAR----EGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp TCCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCcCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 99999999998 8899999999999998864
No 4
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1e-34 Score=225.52 Aligned_cols=177 Identities=24% Similarity=0.262 Sum_probs=163.3
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCC-----ccccccCC
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICP-----ESLEKLTS 82 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~ 82 (252)
.++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.+. ...+..+.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 5788999999999999999999999999999999988 89999999999999999999999999883 23577888
Q ss_pred CCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCC-CCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 83 NGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDK-EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 83 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
.|.||||+|+..++.+++++|++.++ +++..+. .|+||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~ 183 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGA------DVNAQEPCNGRTALHLAVDLQNPDLVSLLLK------CGADVNRVTYQ 183 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTC------CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHT------TTCCSCCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcccCC
Confidence 99999999999999999999999999 7888887 99999999999999999999996 89999999999
Q ss_pred CCCHhHhhhhcCCCchhHHHHHHHHHhccccCCCCCCCCC
Q 025505 162 GQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQLPADGA 201 (252)
Q Consensus 162 g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~~~~~~~ 201 (252)
|.||||+|+. .++.+++++|+++|++.....+....
T Consensus 184 g~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~~~~~~~~ 219 (236)
T 1ikn_D 184 GYSPYQLTWG----RPSTRIQQQLGQLTLENLQMLPESED 219 (236)
T ss_dssp CCCGGGGCTT----SSCHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred CCCHHHHHHc----cCchHHHHHHHHcchhhhhcCCccch
Confidence 9999999998 88999999999999988765555433
No 5
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.1e-35 Score=220.48 Aligned_cols=171 Identities=19% Similarity=0.249 Sum_probs=147.0
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
|...+..++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.+..+++..+
T Consensus 25 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 25 LQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN 103 (201)
T ss_dssp HTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence 4455556788888899999999999999999999999888887 888889999999999999999999977767888888
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHH-hcccccccccccCCCCCcHHHHHHhCCh-----HHHHHHHHhcccccceeeee
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEA-KNHRKEHLFTWKDKEGNTVLHLATLNKL-----KQIVELLIRENSNRRIMIRI 155 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~g~t~Lh~A~~~~~-----~~~v~~Ll~~~~~~~~~~~~ 155 (252)
..|.||||+|+..++.+++++|++.+ . +++..+..|+||||+|+..++ .+++++|++ .|+++
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~------~ga~~ 171 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGRE------DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME------NGADQ 171 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCC------CTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH------TTCCT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC------CcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH------CCCCC
Confidence 88999999999999999999999888 5 778888889999999998877 889999995 78888
Q ss_pred ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhc
Q 025505 156 NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAI 189 (252)
Q Consensus 156 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~g 189 (252)
+.+|..|.||||+|+. .++.+++++|+++|
T Consensus 172 ~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 172 SIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp TCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred CccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 8888889999999888 88889999988876
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-34 Score=223.98 Aligned_cols=175 Identities=23% Similarity=0.251 Sum_probs=165.3
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
+...|..++..|..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++
T Consensus 26 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 103 (231)
T 3aji_A 26 ILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAGXDEIVKALLVKG-AHVNAVN 103 (231)
T ss_dssp HHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCCC
Confidence 4556778889999999999999999999999999999999987 8999999999999999999999999999 6888999
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
..|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 104 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~ 171 (231)
T 3aji_A 104 QNGCTPLHYAASKNRHEIAVMLLEGGA------NPDAKDHYDATAMHRAAAKGNLKMVHILLF------YKASTNIQDTE 171 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHh------cCCCccccCCC
Confidence 999999999999999999999999998 788899999999999999999999999996 88899999999
Q ss_pred CCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 162 GQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 162 g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|.||||+|+. .++.+++++|+++|++++.
T Consensus 172 g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 172 GNTPLHLACD----EERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp SCCHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred CCCHHHHHHH----CCCHHHHHHHHHCCCCCCC
Confidence 9999999998 8899999999999998864
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=4.1e-35 Score=220.74 Aligned_cols=167 Identities=17% Similarity=0.106 Sum_probs=157.9
Q ss_pred ccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 6 PQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
+.+++.+|..|+||||+|+..|+.+++++|++.+++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGK 102 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCC
Confidence 345778999999999999999999999999999999887 8899999999999999999999999999 68899999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCH
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTT 165 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 165 (252)
||||+|+..++.+++++|++.++ +++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~ 170 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGA------NVNDRNLEGETPLIVASKYGRSEIVKKLLE------LGADISARDLTGLTA 170 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTC------CSSCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCBCTTSCBH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCH
Confidence 99999999999999999999998 789999999999999999999999999996 789999999999999
Q ss_pred hHhhhhcCCCchhHHHHHHHHHhcc
Q 025505 166 LQLCNANSQDSAFKEIGWIIQRAIA 190 (252)
Q Consensus 166 l~~a~~~~~~~~~~~~~~~L~~~ga 190 (252)
+++|+. .++.+++++|+++|.
T Consensus 171 l~~A~~----~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 171 EASARI----FGRQEVIKIFTEVRR 191 (192)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHH
T ss_pred HHHHHH----hCcHHHHHHHHhccC
Confidence 999999 889999999998863
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2e-34 Score=229.18 Aligned_cols=173 Identities=21% Similarity=0.248 Sum_probs=148.2
Q ss_pred ccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCc----------
Q 025505 6 PQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPE---------- 75 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~---------- 75 (252)
+..++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++++.
T Consensus 35 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (282)
T 1oy3_D 35 HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYL 113 (282)
T ss_dssp SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----
T ss_pred cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHh
Confidence 344778888888888888888888888888888888877 788888899988888888888888886632
Q ss_pred ------------------------------------cccccCCCCchHHHHHHHcCChHHHHHHHHHHhccccccccccc
Q 025505 76 ------------------------------------SLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWK 119 (252)
Q Consensus 76 ------------------------------------~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 119 (252)
.++.++..|.||||+|+..|+.+++++|++.++ +++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~ 187 (282)
T 1oy3_D 114 TQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA------DLNKP 187 (282)
T ss_dssp ------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC------CTTCC
T ss_pred hcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC------CCCCC
Confidence 245667789999999999999999999999888 77777
Q ss_pred CCC-CCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 120 DKE-GNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 120 ~~~-g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
+.. |+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+++++|+++|++++..
T Consensus 188 ~~~~g~tpL~~A~~~~~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 188 EPTCGRTPLHLAVEAQAASVLELLLK------AGADPTARMYGGRTPLGSALL----RPNPILARLLRAHGAPEPED 254 (282)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHT----SSCHHHHHHHHHTTCCCCCC
T ss_pred CCCCCcCHHHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCHHHHHHH----cCCcHHHHHHHHcCCCcCcC
Confidence 754 9999999999999999999996 788999999999999999998 88899999999999998753
No 9
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.9e-34 Score=221.53 Aligned_cols=177 Identities=20% Similarity=0.218 Sum_probs=153.8
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccc----cccCCCCcHHHHHHHcCCHHHHHHHHHhCCccc
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCL----EVDNSSMIPLHRAALDGNSDVIRALVSICPESL 77 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 77 (252)
|+..+..++.+|..|+||||+|+..|+.+++++|++.++++.. ..+..|.||||+|+..|+.+++++|++++ .++
T Consensus 23 l~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 101 (232)
T 2rfa_A 23 LKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG-ASV 101 (232)
T ss_dssp HTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCC
Confidence 3344666888999999999999999999999999999988632 25678999999999999999999999998 566
Q ss_pred cccCC-------------CCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHH----H
Q 025505 78 EKLTS-------------NGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIV----E 140 (252)
Q Consensus 78 ~~~~~-------------~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v----~ 140 (252)
+..+. .|.||||+|+..|+.+++++|++.++ +++.+|..|+||||+|+..++.+++ +
T Consensus 102 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~ 175 (232)
T 2rfa_A 102 SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA------DIRAQDSLGNTVLHILILQPNKTFACQMYN 175 (232)
T ss_dssp TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHTCSCHHHHHHHHH
T ss_pred CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHcCChHHHHHHHH
Confidence 66554 79999999999999999999999998 8899999999999999999999888 9
Q ss_pred HHHhcccccceeeee------ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 141 LLIRENSNRRIMIRI------NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 141 ~Ll~~~~~~~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
+|++ .|++. +.+|..|+||||+|+. .++.+++++|+++|+.....
T Consensus 176 ~Ll~------~g~~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 176 LLLS------YDGGDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp HHHH------TTCSCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHC---
T ss_pred HHHh------cCCchhhhhhhccCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccchhh
Confidence 9997 55555 5889999999999999 88999999999999988653
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=7.4e-34 Score=209.15 Aligned_cols=163 Identities=20% Similarity=0.220 Sum_probs=155.1
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHc
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 94 (252)
.|.||||+|+..|+.++++.|++.+.+++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc
Confidence 589999999999999999999999999887 8999999999999999999999999998 78899999999999999999
Q ss_pred CChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCC
Q 025505 95 SRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQ 174 (252)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 174 (252)
++.+++++|++.+. +++..+..|+||||+|+..++.+++++|++ .|++++.+|..|.||+++|+.
T Consensus 80 ~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~--- 144 (167)
T 3v31_A 80 GYTDIVKMLLDCGV------DVNEYDWNGGTPLLYAVHGNHVKCVKMLLE------SGADPTIETDSGYNSMDLAVA--- 144 (167)
T ss_dssp TCHHHHHHHHHHTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH---
T ss_pred CCHHHHHHHHHCCC------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHH---
Confidence 99999999999998 789999999999999999999999999996 889999999999999999999
Q ss_pred CchhHHHHHHHHHhccccCCC
Q 025505 175 DSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 175 ~~~~~~~~~~L~~~ga~~~~~ 195 (252)
.++.+++++|++++++....
T Consensus 145 -~~~~~~~~~L~~~~~~~~~~ 164 (167)
T 3v31_A 145 -LGYRSVQQVIESHLLKLLQN 164 (167)
T ss_dssp -HTCHHHHHHHHHHHHHHCSS
T ss_pred -cCcHHHHHHHHHHHHHHHHH
Confidence 88999999999999987653
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=229.65 Aligned_cols=167 Identities=20% Similarity=0.301 Sum_probs=127.3
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
-++.+|.+|+||||+||..|+.++|++|++.+++++. .+..|.||+|+|+..++.+++++|++.+ .+++.+|..|.||
T Consensus 78 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~Tp 155 (269)
T 4b93_B 78 GVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTP 155 (269)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCH
Confidence 3667788888888888888888888888888888776 7778888888888888888888888887 6777888888888
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|++.++ +++..+..|+||||+|+..|+.++|++|++ .|++++.+|..|+||||
T Consensus 156 L~~A~~~g~~~~v~~Ll~~ga------dvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~------~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQHGA------SINASNNKGNTALHEAVIEKHVFVVELLLL------HGASVQVLNKRQRTAVD 223 (269)
T ss_dssp HHHHHHTTCGGGHHHHHHTTC------CTTCBCTTSCBHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCSGG
T ss_pred HHHHHHCCCHHHHHHHHHCCC------CCCccccCCCcHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHH
Confidence 888888888888888888877 677888888888888888888888888885 77788888888888888
Q ss_pred hhhhcCCCchh-HHHHHHHHHhcccc
Q 025505 168 LCNANSQDSAF-KEIGWIIQRAIAQQ 192 (252)
Q Consensus 168 ~a~~~~~~~~~-~~~~~~L~~~ga~~ 192 (252)
+|+. ++. .+++++|.+.++..
T Consensus 224 ~A~~----~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 224 CAEQ----NSKIMELLQVVPSCVASL 245 (269)
T ss_dssp GSCT----TCHHHHHTTC--------
T ss_pred HHHh----CCcHHHHHHHHHHhchhh
Confidence 8875 333 34455555555544
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.9e-34 Score=218.78 Aligned_cols=177 Identities=25% Similarity=0.233 Sum_probs=162.1
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcC--ccccccccCCCCcHHHHHHHcCCHHHHHHHHHhC-Ccccc
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEIN--RELCLEVDNSSMIPLHRAALDGNSDVIRALVSIC-PESLE 78 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~ 78 (252)
|+..++..+..|..|.||||+|+..|+.+++++|++.+ .++....+..|.||||+|+..|+.+++++|++++ ..+++
T Consensus 22 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 101 (228)
T 2dzn_A 22 LHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN 101 (228)
T ss_dssp HHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT
T ss_pred HhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc
Confidence 45667777889999999999999999999999999999 4444446789999999999999999999999987 35678
Q ss_pred ccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhccccccee-eeeec
Q 025505 79 KLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIM-IRINT 157 (252)
Q Consensus 79 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~~ 157 (252)
..+..|.||||+|+..++.+++++|++.+. +++..+..|+||||+|+..|+.+++++|++ .| ++++.
T Consensus 102 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~ 169 (228)
T 2dzn_A 102 KITNQGVTCLHLAVGKKWFEVSQFLIENGA------SVRIKDKFNQIPLHRAASVGSLKLIELLCG------LGKSAVNW 169 (228)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHHTTCHHHHHHHHT------TTCCCSCC
T ss_pred cCCcCCCCHHHHHHHcCCHhHHHHHHHcCC------CccccCCCCCCHHHHHHHcCCHHHHHHHHh------cCcccccC
Confidence 889999999999999999999999999998 789999999999999999999999999996 66 88999
Q ss_pred ccCCCCCHhHhhhhcCCCchhHHHHHHHH-HhccccCC
Q 025505 158 VNKEGQTTLQLCNANSQDSAFKEIGWIIQ-RAIAQQSP 194 (252)
Q Consensus 158 ~~~~g~t~l~~a~~~~~~~~~~~~~~~L~-~~ga~~~~ 194 (252)
+|..|+||||+|+. .++.+++++|+ ++|++++.
T Consensus 170 ~d~~g~t~L~~A~~----~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 170 QDKQGWTPLFHALA----EGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp CCTTSCCHHHHHHH----TTCHHHHHHHHHHHCCCSCC
T ss_pred cCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCCc
Confidence 99999999999999 88999999999 99999875
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.9e-34 Score=225.39 Aligned_cols=175 Identities=21% Similarity=0.257 Sum_probs=157.2
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCcc---ccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCC
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRE---LCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNG 84 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 84 (252)
+++.+|+.|+||||+||..|+.++|++|++.+++ ++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g 78 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL-QNDLGQTALHLAAILGEASTVEKLYAAG-AGVLVAERGG 78 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTS
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCC
Confidence 3678899999999999999999999999999887 555 8889999999999999999999999999 7889999999
Q ss_pred chHHHHHHHcCChHHHHHHHHHHhccc-----------------------------------------ccccccccCCCC
Q 025505 85 ETALHLAVKKSRSDAFEALVDEAKNHR-----------------------------------------KEHLFTWKDKEG 123 (252)
Q Consensus 85 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~-----------------------------------------~~~~~~~~~~~g 123 (252)
.||||+|+..++.+++++|++.++... ...+++..+..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 999999999999999999998664311 011467788999
Q ss_pred CcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC-CCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 124 NTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE-GQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 124 ~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+||||+|+..|+.+++++|++ .|++++..+.. |.||||+|+. .++.+++++|+++|++++.
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRD------AGADLNKPEPTCGRTPLHLAVE----AQAASVLELLLKAGADPTA 220 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 999999999999999999996 88899998854 9999999999 8899999999999999875
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=8.6e-34 Score=207.67 Aligned_cols=159 Identities=21% Similarity=0.238 Sum_probs=147.7
Q ss_pred CCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHH
Q 025505 14 QRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVK 93 (252)
Q Consensus 14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~ 93 (252)
+...||||+|+..|+.+++++|++.+.+++. .+..|.||||+|+. |+.+++++|++++ .+++.++..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLRG-ANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHH
Confidence 4678999999999999999999999999987 89999999999999 9999999999998 7889999999999999999
Q ss_pred cCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeee-eecccCCCCCHhHhhhhc
Q 025505 94 KSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIR-INTVNKEGQTTLQLCNAN 172 (252)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~~~~g~t~l~~a~~~ 172 (252)
.++.+++++|++.+. +++.++..|+||||+|+..++.+++++|++ .|.+ ++.+|..|.||||+|+.
T Consensus 80 ~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~~g~t~l~~A~~- 146 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQA------DVNIEDNEGNLPLHLAAKEGHLRVVEFLVK------HTASNVGHRNHKGDTACDLARL- 146 (162)
T ss_dssp HTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------HSCCCTTCCCTTSCCHHHHHHH-
T ss_pred cCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------ccCCCCCCcCCCCCcHHHHHHH-
Confidence 999999999999998 789999999999999999999999999996 6666 58999999999999999
Q ss_pred CCCchhHHHHHHHHHhccc
Q 025505 173 SQDSAFKEIGWIIQRAIAQ 191 (252)
Q Consensus 173 ~~~~~~~~~~~~L~~~ga~ 191 (252)
.++.+++++|+++||+
T Consensus 147 ---~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 147 ---YGRNEVVSLMQANGAG 162 (162)
T ss_dssp ---TTCHHHHHHHHHTC--
T ss_pred ---cCCHHHHHHHHHhCCC
Confidence 8899999999999985
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5e-33 Score=216.25 Aligned_cols=173 Identities=22% Similarity=0.227 Sum_probs=153.1
Q ss_pred CccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCc---cccccC
Q 025505 5 WPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPE---SLEKLT 81 (252)
Q Consensus 5 ~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~ 81 (252)
.+..++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.++. +++..+
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 113 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN 113 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC
Confidence 4555778888899999999999999999999999888877 788899999999999999999999988742 667788
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccC-CCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK 160 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 160 (252)
..|.||||+|+..++.+++++|++.+. +++..+ ..|.||||+|+..++.+++++|++ .|++++.+|.
T Consensus 114 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~ 181 (241)
T 1k1a_A 114 YDGLTALHVAVNTECQETVQLLLERGA------DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ------HGANVNAQMY 181 (241)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCBCT
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCC------CcccccccCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCC
Confidence 889999999999999999999999888 677777 789999999999999999999996 7889999999
Q ss_pred CCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 161 EGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 161 ~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.|.||||+|+. .++.+++++|+++|++++.
T Consensus 182 ~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 182 SGSSALHSASG----RGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp TSCBHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHH----cCCHHHHHHHHhcCCCCCC
Confidence 99999999998 8899999999999999875
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.1e-33 Score=207.25 Aligned_cols=162 Identities=23% Similarity=0.310 Sum_probs=149.7
Q ss_pred ccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHH
Q 025505 10 SIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALH 89 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 89 (252)
......+.|+|++|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGMTPLR 85 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHH
Confidence 34556788999999999999999999999999987 8999999999999999999999999998 788999999999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhh
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLC 169 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a 169 (252)
+|+..++.+++++|++.++ +++..|..|+||||+|+..++.+++++|++ .|++++.+|..|.||+++|
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A 153 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGA------DVNANDMEGHTPLHLAAMFGHLEIVEVLLK------NGADVNAQDKFGKTAFDIS 153 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999998 788999999999999999999999999996 8899999999999999999
Q ss_pred hhcCCCchhHHHHHHHHHhc
Q 025505 170 NANSQDSAFKEIGWIIQRAI 189 (252)
Q Consensus 170 ~~~~~~~~~~~~~~~L~~~g 189 (252)
+. .++.+++++|+++|
T Consensus 154 ~~----~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 154 ID----NGNEDLAEILQKLN 169 (169)
T ss_dssp HH----TTCHHHHHHHHTC-
T ss_pred HH----hCCHHHHHHHHHcC
Confidence 98 88999999999876
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.1e-33 Score=214.43 Aligned_cols=171 Identities=17% Similarity=0.191 Sum_probs=159.6
Q ss_pred cccccccCCCChHHHHHHhCCCHHHHHHHhhcCc-cccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 7 QLASIKNQRGETTMHLLSTDGDAETVRIFGEINR-ELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 7 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
..++..|..|.||||+|+..|+.+++++|++.++ +++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.
T Consensus 49 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~ 126 (223)
T 2f8y_A 49 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGK 126 (223)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSC
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCC
Confidence 3467889999999999999999999999999987 5555 8899999999999999999999999998 68899999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCH
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTT 165 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 165 (252)
||||+|+..++.+++++|++.++ +++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~ 194 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGA------NKDMQNNREETPLFLAAREGSYETAKVLLD------HFANRDITDHMDRLP 194 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCCH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCcCHHHHHHHcCCHHHHHHHHH------cCCCCccccccCCCH
Confidence 99999999999999999999998 788999999999999999999999999996 888999999999999
Q ss_pred hHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 166 LQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 166 l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
+++|+. .++.+++++|+++|+...+.
T Consensus 195 l~~A~~----~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 195 RDIAQE----RMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHHHHH----TTCHHHHHHHHHTTCSSCC-
T ss_pred HHHHHH----hcchHHHHHHHHcCCCcccc
Confidence 999999 88999999999999988753
No 18
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.3e-33 Score=226.51 Aligned_cols=181 Identities=19% Similarity=0.214 Sum_probs=160.0
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
|...+..++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++..+
T Consensus 44 l~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~ 121 (351)
T 3utm_A 44 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA-KDKGGLVPLHNACSYGHYEVTELLLKHG-ACVNAMD 121 (351)
T ss_dssp CCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCC
Confidence 4445666788899999999999999999999999999999987 8999999999999999999999999998 7888899
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhccc--------------------------------------------------
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHR-------------------------------------------------- 111 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~-------------------------------------------------- 111 (252)
..|.||||+|+..++.+++++|++.+++..
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 201 (351)
T 3utm_A 122 LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALE 201 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhh
Confidence 999999999999999999999998765421
Q ss_pred ----------------------------------ccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeec
Q 025505 112 ----------------------------------KEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT 157 (252)
Q Consensus 112 ----------------------------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 157 (252)
...+++..+..|+||||+|+..|+.+++++|++ .|++++.
T Consensus 202 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~n~ 275 (351)
T 3utm_A 202 IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK------HGAKMNA 275 (351)
T ss_dssp CTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTC
T ss_pred cccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCC
Confidence 112456678889999999999999999999996 8889999
Q ss_pred ccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 158 VNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 158 ~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+|..|+||||+|+. .++.+++++|+++|++++.
T Consensus 276 ~d~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 276 LDSLGQTALHRAAL----AGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp CCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCCCHHHHHHH----cCcHHHHHHHHHcCCCCCC
Confidence 99999999999998 8899999999999998765
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=4.2e-33 Score=206.05 Aligned_cols=162 Identities=21% Similarity=0.248 Sum_probs=151.6
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcC
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~ 95 (252)
+.||||+|+..|+.++++.|++.+.+.....+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999998844448999999999999999999999999999 788999999999999999999
Q ss_pred ChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCC
Q 025505 96 RSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQD 175 (252)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 175 (252)
+.+++++|++.+. +++..+..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 81 ~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~---- 144 (172)
T 3v30_A 81 YTDIVGLLLERDV------DINIYDWNGGTPLLYAVRGNHVKCVEALLA------RGADLTTEADSGYTPMDLAVA---- 144 (172)
T ss_dssp CHHHHHHHHTTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----
T ss_pred CHHHHHHHHHcCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHH----
Confidence 9999999999998 789999999999999999999999999996 889999999999999999999
Q ss_pred chhHHHHHHHHHhccccCC
Q 025505 176 SAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 176 ~~~~~~~~~L~~~ga~~~~ 194 (252)
.++.+++++|+++|++...
T Consensus 145 ~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 145 LGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp HTCHHHHHHHHHHHHHHSC
T ss_pred hCcHHHHHHHHHHHHHHhc
Confidence 8899999999999998865
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.2e-33 Score=215.48 Aligned_cols=168 Identities=22% Similarity=0.209 Sum_probs=159.1
Q ss_pred cccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCch
Q 025505 7 QLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGET 86 (252)
Q Consensus 7 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 86 (252)
..++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.|
T Consensus 64 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t 141 (231)
T 3aji_A 64 VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDAT 141 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCc
Confidence 34678899999999999999999999999999999987 8999999999999999999999999999 688899999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHh
Q 025505 87 ALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTL 166 (252)
Q Consensus 87 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l 166 (252)
|||+|+..++.+++++|++.+. +++.++..|+||||+|+..++.+++++|++ .|++++.+|..|+||+
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l 209 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKA------STNIQDTEGNTPLHLACDEERVEEAKFLVT------QGASIYIENKEEKTPL 209 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCC------CccccCCCCCCHHHHHHHCCCHHHHHHHHH------CCCCCCCCCCCCCCHH
Confidence 9999999999999999999998 789999999999999999999999999996 8899999999999999
Q ss_pred HhhhhcCCCchhHHHHHHHHHhcccc
Q 025505 167 QLCNANSQDSAFKEIGWIIQRAIAQQ 192 (252)
Q Consensus 167 ~~a~~~~~~~~~~~~~~~L~~~ga~~ 192 (252)
++|.. .++.+++++|.++|+++
T Consensus 210 ~~A~~----~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 210 QVAKG----GLGLILKRLAEGEEASM 231 (231)
T ss_dssp HHSCH----HHHHHHHHHHHHHHHCC
T ss_pred HHHHh----hHHHHHHHHHccccccC
Confidence 99998 88999999999999864
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.2e-33 Score=214.99 Aligned_cols=169 Identities=18% Similarity=0.186 Sum_probs=143.4
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.++..++..+..|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 566777888888888888888888888888888776 7778888888888888888888888887667777888888888
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHh
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQL 168 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~ 168 (252)
|+|+..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~ 183 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGS------DINIRDNEENICLHWAAFSGCVDIAEILLA------AKCDLHAVNIHGDSPLHI 183 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHCCHHHHHHHHT------TTCCTTCCCTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCC------CCCccCCCCCCHHHHHHHCCCHHHHHHHHH------cCCCCCCcCCCCCCHHHH
Confidence 88888888888888888887 778888889999999999999999999995 788888888899999999
Q ss_pred hhhcCCCchhHHHHHHHHHhccccCC
Q 025505 169 CNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 169 a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|+. .++.+++++|+++|++++.
T Consensus 184 A~~----~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 184 AAR----ENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp HHH----TTCHHHHHHHHTTTCCTTC
T ss_pred HHH----hCCHhHHHHHHHcCCCCCc
Confidence 988 7888999999999988765
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.7e-32 Score=212.24 Aligned_cols=162 Identities=22% Similarity=0.221 Sum_probs=146.3
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhc-CccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccc----cccCCCCchHHH
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEI-NRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESL----EKLTSNGETALH 89 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~g~t~L~ 89 (252)
.|+||||+|+..|+.++++.|++. +.+++. .+..|.||||+|+..|+.+++++|+++++... +..+..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 889887 89999999999999999999999999984322 556789999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCC-------------CCCcHHHHHHhCChHHHHHHHHhcccccceeeeee
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDK-------------EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRIN 156 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-------------~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 156 (252)
+|+..|+.+++++|++.++ +++..+. .|+||||+|+..|+.+++++|++ .|++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~------~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~ 148 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGA------SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------HGADIR 148 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTC------CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH------TTCCTT
T ss_pred HHHHcCCHHHHHHHHhCCC------CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH------CCCCCC
Confidence 9999999999999999998 4555544 79999999999999999999996 889999
Q ss_pred cccCCCCCHhHhhhhcCCCchhHHHH----HHHHHhccccC
Q 025505 157 TVNKEGQTTLQLCNANSQDSAFKEIG----WIIQRAIAQQS 193 (252)
Q Consensus 157 ~~~~~g~t~l~~a~~~~~~~~~~~~~----~~L~~~ga~~~ 193 (252)
.+|..|+||||+|+. .++.+++ ++|+++|++..
T Consensus 149 ~~d~~g~t~L~~A~~----~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 149 AQDSLGNTVLHILIL----QPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CCCTTSCCHHHHHHT----CSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCCCCCCHHHHHHH----cCChHHHHHHHHHHHhcCCchh
Confidence 999999999999998 6677766 99999999775
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-33 Score=221.31 Aligned_cols=170 Identities=21% Similarity=0.254 Sum_probs=126.2
Q ss_pred cccccCCCChHHHHHHhCC-------------CHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCc
Q 025505 9 ASIKNQRGETTMHLLSTDG-------------DAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPE 75 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 75 (252)
++.+|..|.||||+|+..| +.++++.|++.|+++....+..|.||||+|+..|+.+++++|++++ .
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~ 81 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-A 81 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-C
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-C
Confidence 6788999999999999987 8999999999999997757899999999999999999999999999 7
Q ss_pred cccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeee
Q 025505 76 SLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRI 155 (252)
Q Consensus 76 ~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 155 (252)
+++.++..|.||||+|+..++.+++++|++.+.. +++..+..|.||||+|+..++.+++++|++ .|+++
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~ 150 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-----DLDARMHDGTTPLILAARLAVEGMLEDLIN------SHADV 150 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS-----CTTCCCTTCCCHHHHHHHHTCSSHHHHHHH------TTCCT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CccccCCCCCcHHHHHHHcChHHHHHHHHH------cCCCC
Confidence 8899999999999999999999999999998763 678889999999999999999999999996 88999
Q ss_pred ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 156 NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 156 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 151 ~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAA----VNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp TCBCTTSCBHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999 8899999999999999875
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.6e-33 Score=217.60 Aligned_cols=167 Identities=19% Similarity=0.205 Sum_probs=152.7
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
.++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++. +..|.||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-~~~g~t~ 104 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHG-ASVQP-ESDLASP 104 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSC-SCTTCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC-CCCCCCH
Confidence 4778899999999999999999999999999999987 8999999999999999999999999998 44443 4569999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|++.+. +++..+..|+||||+|+..++.+++++|++ .|++++. +..|.||||
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~-~~~g~t~Lh 171 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGG------NIDHKISHLGTPLYLACENQQRACVKKLLE------SGADVNQ-GKGQDSPLH 171 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CTTCCBTTTBCHHHHHHHTTCHHHHHHHHH------HTCCTTC-CBTTBCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCC------CCCcCCCCCCCHHHHHHHhCCHHHHHHHHH------cCCCCCC-CCCCCChHH
Confidence 999999999999999999998 788999999999999999999999999996 7788874 889999999
Q ss_pred hhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 168 LCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 168 ~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+|+. .++.+++++|+++|++++.
T Consensus 172 ~A~~----~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 172 AVAR----TASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred HHHH----cCCHHHHHHHHHcCCCCCC
Confidence 9998 8899999999999999875
No 25
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=4.5e-33 Score=204.53 Aligned_cols=161 Identities=22% Similarity=0.255 Sum_probs=145.6
Q ss_pred ccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHH
Q 025505 12 KNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLA 91 (252)
Q Consensus 12 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a 91 (252)
.|..|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHH
Confidence 47789999999999999999999999655333337888999999999999999999999999 78899999999999999
Q ss_pred HHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhh
Q 025505 92 VKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNA 171 (252)
Q Consensus 92 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 171 (252)
+..++.+++++|++.++ +++..|..|+||||+|+..++.+++++|++ .|++++.+|..|.||+|+|.
T Consensus 83 ~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~a~- 149 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGA------VVNVADLWKFTPLHEAAAKGKYEICKLLLQ------HGADPTKKNRDGNTPLDLVK- 149 (165)
T ss_dssp HHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCTGGGSC-
T ss_pred HHcCcHHHHHHHHhCCC------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCChhHhHh-
Confidence 99999999999999998 789999999999999999999999999996 88999999999999999987
Q ss_pred cCCCchhHHHHHHHHHhcc
Q 025505 172 NSQDSAFKEIGWIIQRAIA 190 (252)
Q Consensus 172 ~~~~~~~~~~~~~L~~~ga 190 (252)
.++.+++++|++.|+
T Consensus 150 ----~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 150 ----DGDTDIQDLLRGDAA 164 (165)
T ss_dssp ----TTCHHHHHHHHTC--
T ss_pred ----cCChHHHHHHhhccc
Confidence 567799999999886
No 26
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.5e-33 Score=221.47 Aligned_cols=166 Identities=20% Similarity=0.204 Sum_probs=152.2
Q ss_pred ccCCCChHHHHHHhC---CCHHHHHHHhhcCcccccc----------ccCCCCcHHHHHHHcCCHHHHHHHHHhCCcccc
Q 025505 12 KNQRGETTMHLLSTD---GDAETVRIFGEINRELCLE----------VDNSSMIPLHRAALDGNSDVIRALVSICPESLE 78 (252)
Q Consensus 12 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~----------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 78 (252)
.|..|+||||+|+.. |+.+++++|++.|++.+.. .|..|.||||+|+..|+.+++++|++++ .+++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG-ADVH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC-CCCC
Confidence 799999999999999 9999999999999876531 2467999999999999999999999998 6788
Q ss_pred ccCCC-------------CchHHHHHHHcCChHHHHHHHH---HHhcccccccccccCCCCCcHHHHHHh--CChHH---
Q 025505 79 KLTSN-------------GETALHLAVKKSRSDAFEALVD---EAKNHRKEHLFTWKDKEGNTVLHLATL--NKLKQ--- 137 (252)
Q Consensus 79 ~~~~~-------------g~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~--~~~~~--- 137 (252)
.++.. |.||||+|+..|+.+++++|++ .++ +++.+|..|+||||+|+. .++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga------~~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA------SLEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC------CcCccCCCCCCHHHHHHHcccCCchhhH
Confidence 88776 9999999999999999999999 888 899999999999999998 78888
Q ss_pred ----HHHHHHhcccccceeeee-------ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 138 ----IVELLIRENSNRRIMIRI-------NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 138 ----~v~~Ll~~~~~~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
++++|++ .|+++ +.+|..|+||||+|+. .++.+++++|+++|++...
T Consensus 192 ~~~~iv~~Ll~------~ga~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 192 LVIHMYDGLLQ------MGARLCPTVQLEEISNHQGLTPLKLAAK----EGKIEIFRHILQREFSGAA 249 (256)
T ss_dssp HHHHHHHHHHH------HHHHHSTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------cCCCcccccccccccCCCCCCHHHHHHH----hCCHHHHHHHHhCCCCCCC
Confidence 9999996 88888 8999999999999999 8899999999999998753
No 27
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=221.31 Aligned_cols=165 Identities=21% Similarity=0.283 Sum_probs=155.3
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCc-cccccccCCCCcHHHHHH-----HcCCHHHHHHHHHhCCccccccC
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINR-ELCLEVDNSSMIPLHRAA-----LDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
.++.+|..|+||||+||..|+.+++++|++.|+ +++. .+..|.||||+|+ ..++.+++++|++.+ ......+
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~ 180 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDK-QNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKAS 180 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCC-CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccC
Confidence 378899999999999999999999999999998 7776 8999999999999 678999999999999 6778889
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
..|.||||+|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++ ..|++++.+|..
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga------d~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~-----~~gad~~~~d~~ 249 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEA------DVNVQDDDGSTALMCACEHGHKEIAGLLLA-----VPSCDISLTDRD 249 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHT-----STTCCTTCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCC------CCCCCCCCCCCHHHHHHHCCCHHHHHHHHh-----cCCCCCcCcCCC
Confidence 999999999999999999999999999 899999999999999999999999999996 479999999999
Q ss_pred CCCHhHhhhhcCCCchhHHHHHHHHHhc
Q 025505 162 GQTTLQLCNANSQDSAFKEIGWIIQRAI 189 (252)
Q Consensus 162 g~t~l~~a~~~~~~~~~~~~~~~L~~~g 189 (252)
|+||||+|+. .++.+++++|++++
T Consensus 250 g~TpL~~A~~----~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 250 GSTALMVALD----AGQSEIASMLYSRM 273 (276)
T ss_dssp SCCHHHHHHH----HTCHHHHHHHHHHC
T ss_pred CCCHHHHHHH----cCCHHHHHHHHhcc
Confidence 9999999999 88999999999875
No 28
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2.2e-32 Score=203.54 Aligned_cols=163 Identities=20% Similarity=0.243 Sum_probs=150.8
Q ss_pred CCCChHHHHHHhCCCHHHHHHHhhcCc-cccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHH
Q 025505 14 QRGETTMHLLSTDGDAETVRIFGEINR-ELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAV 92 (252)
Q Consensus 14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~ 92 (252)
+.+.++||.||..|+.++++.|++.+. +++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQ-GDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccc-cCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 468899999999999999999999854 4555 8999999999999999999999999998 788999999999999999
Q ss_pred HcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhc
Q 025505 93 KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNAN 172 (252)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 172 (252)
..++.+++++|++.++ +++..|..|.||||+|+..++.+++++|++ .|++++.+|..|.||+++|..
T Consensus 81 ~~~~~~~v~~Ll~~g~------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~- 147 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKA------DINAVNEHGNVPLHYACFWGQDQVAEDLVA------NGALVSICNKYGEMPVDKAKA- 147 (179)
T ss_dssp HTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCSSBCCTTSCCGGGGSCH-
T ss_pred HcCCHHHHHHHHHcCC------CCCccCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCcchhccCCCCcHHHHHH-
Confidence 9999999999999998 889999999999999999999999999996 889999999999999999998
Q ss_pred CCCchhHHHHHHHHHhccccCC
Q 025505 173 SQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 173 ~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.++.+++++|+++|++.+.
T Consensus 148 ---~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 148 ---PLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp ---HHHHHHHHHHHHTTCCCSC
T ss_pred ---HHHHHHHHHHHHhhcCccc
Confidence 8999999999999999975
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=220.96 Aligned_cols=169 Identities=21% Similarity=0.179 Sum_probs=133.5
Q ss_pred ccccccCCCChHHHHHHhCCCH-HHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCch
Q 025505 8 LASIKNQRGETTMHLLSTDGDA-ETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGET 86 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 86 (252)
.++..|..|.|||++|+..++. .+++.|++.|++++. .|..|+||||+|+..|+.+++++|++.+ .+++..+..|.|
T Consensus 44 ~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~~~~~~~g~t 121 (269)
T 4b93_B 44 TVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV-TSQDGSSPLHVAALHGRADLIPLLLKHG-ANAGARNADQAV 121 (269)
T ss_dssp -------------------------------CCCCTTC-CCTTSCCHHHHHHHTTCTTHHHHHHHTT-CCTTCCCTTCCC
T ss_pred cccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHhcC-CCcCccCCCCCC
Confidence 4677888999999999988875 488999999999988 8999999999999999999999999999 788999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHh
Q 025505 87 ALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTL 166 (252)
Q Consensus 87 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l 166 (252)
|+|+|+..++.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++ .|++++.++..|.|||
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~g~------~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~------~gadvn~~~~~g~t~L 189 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDSNA------KPNKKDLSGNTPLIYACSGGHHELVALLLQ------HGASINASNNKGNTAL 189 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTCCCHHHHHHHTTCGGGHHHHHH------TTCCTTCBCTTSCBHH
T ss_pred ccccccccChHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHCCCHHHHHHHHH------CCCCCCccccCCCcHH
Confidence 9999999999999999999998 889999999999999999999999999996 8899999999999999
Q ss_pred HhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 167 QLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 167 ~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|+|+. .++.+++++|+++|++++.
T Consensus 190 h~A~~----~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 190 HEAVI----EKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred HHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 99999 8899999999999999875
No 30
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.7e-32 Score=218.94 Aligned_cols=164 Identities=15% Similarity=0.150 Sum_probs=117.3
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++.+|..|.||||+|+..|+.+++++|++.|++++. . +|.||||+|+..|+.+++++|++++ .+++.++..|.|||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~--~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~L 99 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKILLFSG-LDDSQFDDKGNTAL 99 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC-C--TTCCHHHHHTTSSSCHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-C--CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCcHH
Confidence 677888888899998888888888888888888765 3 4888888888888888888888888 67778888888888
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCC-CcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEG-NTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g-~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
|+|+..|+.+++++|++.++ +++..+..| .||||+|+..|+.+++++|++.+ .+.... ..|.||||
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~-~~g~t~L~ 166 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNW------RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI------PSTFDL-AILLSCIH 166 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCG------GGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS------CTTCCC-STHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCC------CCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC------Cccccc-cCCccHHH
Confidence 88888888888888888887 566666666 57777766666666666666522 222100 14445555
Q ss_pred hhhhcCCCchhHHHHHHHHHhccccC
Q 025505 168 LCNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 168 ~a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
+|+. .++.+++++|+++|++++
T Consensus 167 ~A~~----~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 167 ITIK----NGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp HHHH----TTCHHHHHHHHHHHHHTC
T ss_pred HHHH----cChHHHHHHHHHcCCCCC
Confidence 5444 444445555554444444
No 31
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-32 Score=217.61 Aligned_cols=166 Identities=16% Similarity=0.115 Sum_probs=137.5
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++.+|..|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.|||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t~L 129 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILLKHG-AQVNGVTADWHTPL 129 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCE-ECTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSSCCCTTCCCHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHH
Confidence 567788999999999999999999999999988887 8888999999999999999999999988 67888889999999
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHh
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQL 168 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~ 168 (252)
|+|+..++.+++++|++.+. +++. +..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~------~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGA------SVQP-ESDLASPIHEAARRGHVECVNSLIA------YGGNIDHKISHLGTPLYL 196 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTC------CSSC-SCTTSCHHHHHHHHTCHHHHHHHHH------TTCCTTCCBTTTBCHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCC------CCCC-CCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHH
Confidence 99999999999999998887 4443 3347788888888777788888775 667777777777777777
Q ss_pred hhhcCCCchhHHHHHHHHHhccccC
Q 025505 169 CNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 169 a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
|+. .++.+++++|++.|++++
T Consensus 197 A~~----~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 197 ACE----NQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHH----TTCHHHHHHHHHTTCCTT
T ss_pred HHH----cCcHHHHHHHHHCCCCCC
Confidence 777 677777777777777765
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.5e-32 Score=211.08 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=158.8
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++..|..|.||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.|||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDT-CSEDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCCCCCCTTSCCHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCc-cCCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCcHH
Confidence 567889999999999999999999999999999987 8899999999999999999999999998 67888999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHh
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQL 168 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~ 168 (252)
|+|+..++.+++++|++.+.. +++..+..|.||||+|+..++.+++++|++ .|++++.++..|.||||+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~ 150 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQM-----DVNCQDDGGWTPMIWATEYKHVDLVKLLLS------KGSDINIRDNEENICLHW 150 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCC-----CcccCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCccCCCCCCHHHH
Confidence 999999999999999998832 788889999999999999999999999996 888999999999999999
Q ss_pred hhhcCCCchhHHHHHHHHHhccccCC
Q 025505 169 CNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 169 a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|+. .++.+++++|++.|++++.
T Consensus 151 A~~----~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 151 AAF----SGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp HHH----HCCHHHHHHHHTTTCCTTC
T ss_pred HHH----CCCHHHHHHHHHcCCCCCC
Confidence 998 8899999999999998865
No 33
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-32 Score=216.47 Aligned_cols=167 Identities=19% Similarity=0.201 Sum_probs=154.6
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
-++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++. +..|.||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-~~~g~t~ 160 (285)
T 3d9h_A 84 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHG-ASVQP-ESDLASP 160 (285)
T ss_dssp CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSSC-SCTTSCH
T ss_pred CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHHHCC-CCCCC-CCCCCCH
Confidence 3778899999999999999999999999999999987 8999999999999999999999999998 44544 4459999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|++.+. +++..+..|+||||+|+..++.+++++|++ .|++++. +..|.||||
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~-~~~g~t~L~ 227 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGG------NIDHKISHLGTPLYLACENQQRACVKKLLE------SGADVNQ-GKGQDSPLH 227 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC------CTTCCBTTTBCHHHHHHHTTCHHHHHHHHH------TTCCTTC-CBTTBCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHH------CCCCCCC-CCCCCCHHH
Confidence 999999999999999999998 789999999999999999999999999996 7778874 889999999
Q ss_pred hhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 168 LCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 168 ~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+|+. .++.+++++|+++|++++.
T Consensus 228 ~A~~----~~~~~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 228 AVVR----TASEELACLLMDFGADTQA 250 (285)
T ss_dssp HHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred HHHH----cCCHHHHHHHHHCCCCCCC
Confidence 9999 8899999999999999875
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=9e-33 Score=219.05 Aligned_cols=167 Identities=19% Similarity=0.197 Sum_probs=147.5
Q ss_pred cccCCCChHHHHHHhC---CCHHHHHHHhhcCcccc-------c---cccCCCCcHHHHHHHcCCHHHHHHHHHhCCccc
Q 025505 11 IKNQRGETTMHLLSTD---GDAETVRIFGEINRELC-------L---EVDNSSMIPLHRAALDGNSDVIRALVSICPESL 77 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~-------~---~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 77 (252)
..|..|+||||+|+.. |+.+++++|++.|++.. . ..+..|.||||+|+..|+.+++++|++++ .++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADV 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCc
Confidence 4588999999999987 99999999999986532 1 14568999999999999999999999998 677
Q ss_pred cccCC--------------CCchHHHHHHHcCChHHHHHHHH---HHhcccccccccccCCCCCcHHHHHHhCCh-----
Q 025505 78 EKLTS--------------NGETALHLAVKKSRSDAFEALVD---EAKNHRKEHLFTWKDKEGNTVLHLATLNKL----- 135 (252)
Q Consensus 78 ~~~~~--------------~g~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~----- 135 (252)
+.++. .|.||||+|+..|+.+++++|++ .++ +++.+|..|+||||+|+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga------d~~~~d~~g~tpLh~A~~~~~~~~~~ 201 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA------DISARDSVGNTVLHALVEVADNTVDN 201 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC------CceeeCCCCCcHHHHHHHccCcchhH
Confidence 88776 79999999999999999999999 888 899999999999999999887
Q ss_pred ----HHHHHHHHhcccccceeeeee-------cccCCCCCHhHhhhhcCCCchhHHHHHHHHHhcc-ccCC
Q 025505 136 ----KQIVELLIRENSNRRIMIRIN-------TVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIA-QQSP 194 (252)
Q Consensus 136 ----~~~v~~Ll~~~~~~~~~~~~~-------~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga-~~~~ 194 (252)
.+++++|++ .|++++ .+|..|.||||+|+. .++.+++++|+++|+ ++..
T Consensus 202 ~~~~~~~v~~Ll~------~ga~~n~~~~~~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 202 TKFVTSMYNEILI------LGAKLHPTLKLEEITNRKGLTPLALAAS----SGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHHHHHHHHHHHH------HHHHHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHH------hhhhcccccccccccCCCCCCHHHHHHH----hChHHHHHHHHHCCCCCchh
Confidence 799999996 788886 489999999999999 889999999999999 4443
No 35
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=214.62 Aligned_cols=161 Identities=17% Similarity=0.136 Sum_probs=150.1
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHc
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 94 (252)
+|+||||+|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILLKHG-AQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHc
Confidence 589999999999999999999999999987 8999999999999999999999999998 78899999999999999999
Q ss_pred CChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCC
Q 025505 95 SRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQ 174 (252)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 174 (252)
|+.+++++|++.++ +++. +..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 80 ~~~~~v~~Ll~~g~------~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~--- 143 (261)
T 2xai_A 80 GSWDCVNLLLQHGA------SVQP-ESDLASPIHEAARRGHVECVNSLIA------YGGNIDHKISHLGTPLYLACE--- 143 (261)
T ss_dssp TCHHHHHHHHHTTC------CSSC-SCTTCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCBTTTBCHHHHHHH---
T ss_pred CCHHHHHHHHHCCC------CCCC-CCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCCcCCCCCCCHHHHHHH---
Confidence 99999999999998 4553 5569999999999999999999996 888999999999999999998
Q ss_pred CchhHHHHHHHHHhccccCC
Q 025505 175 DSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 175 ~~~~~~~~~~L~~~ga~~~~ 194 (252)
.++.+++++|+++|++++.
T Consensus 144 -~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 144 -NQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp -TTCHHHHHHHHHHTCCTTC
T ss_pred -hCCHHHHHHHHHcCCCCCC
Confidence 8899999999999999873
No 36
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.6e-33 Score=217.51 Aligned_cols=173 Identities=21% Similarity=0.264 Sum_probs=151.9
Q ss_pred ccccCCCChHHHHHHhCCCHHHHHHHhhcCc----cccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 10 SIKNQRGETTMHLLSTDGDAETVRIFGEINR----ELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
+.+|.+|.||||+|+..|+.++++.|++.+. +++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 79 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNF-QNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDFRGN 79 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCC-CCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCSCCCCTTCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCC
Confidence 3578999999999999999999999999876 5665 8889999999999999999999999998 78899999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccC-CCCC
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK-EGQT 164 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t 164 (252)
||||+|+..++.+++++|++.+........++..+..|.||||+|+..|+.+++++|++ .|++++.++. .|.|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~~g~t 153 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS------LGADVNAQEPCNGRT 153 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCC
Confidence 99999999999999999999987433333567888999999999999999999999996 8899999997 9999
Q ss_pred HhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 165 TLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 165 ~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|||+|+. .++.+++++|+++|++++.
T Consensus 154 pL~~A~~----~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 154 ALHLAVD----LQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHHHHHH----TTCHHHHHHHHTTTCCSCC
T ss_pred HHHHHHH----cCCHHHHHHHHHcCCCCCc
Confidence 9999999 8899999999999999875
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=9.5e-32 Score=209.02 Aligned_cols=173 Identities=25% Similarity=0.333 Sum_probs=153.6
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhh----cCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCC
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGE----INRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSN 83 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 83 (252)
+++.+|++|+||||+||..|+.+++++|++ .+.+++. .+..|.||||+|+..|+.+++++|++++ .+++..+..
T Consensus 1 l~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~ 78 (241)
T 1k1a_A 1 MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI-YNNLRQTPLHLAVITTLPSVVRLLVTAG-ASPMALDRH 78 (241)
T ss_dssp ------CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTT
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCc-ccccCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCC
Confidence 467889999999999999999999999997 6788877 8999999999999999999999999999 788899999
Q ss_pred CchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeeccc-CCC
Q 025505 84 GETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KEG 162 (252)
Q Consensus 84 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-~~g 162 (252)
|.||||+|+..++.+++++|++.+... ..+++..+..|.||||+|+..++.+++++|++ .|++++..+ ..|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~~g 150 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPG--TLDLEARNYDGLTALHVAVNTECQETVQLLLE------RGADIDAVDIKSG 150 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTT--SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccccccCcCCCcHHHHHHHcCCHHHHHHHHH------cCCCcccccccCC
Confidence 999999999999999999999997621 11567788999999999999999999999996 888899888 789
Q ss_pred CCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 163 QTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 163 ~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.||||+|+. .++.+++++|+++|++++.
T Consensus 151 ~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 151 RSPLIHAVE----NNSLSMVQLLLQHGANVNA 178 (241)
T ss_dssp CCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred CcHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 999999998 8899999999999998865
No 38
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=6.8e-33 Score=218.14 Aligned_cols=166 Identities=20% Similarity=0.206 Sum_probs=148.2
Q ss_pred cCCCChHHHHHH---hCCCHHHHHHHhhcCccccc----------cccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccc
Q 025505 13 NQRGETTMHLLS---TDGDAETVRIFGEINRELCL----------EVDNSSMIPLHRAALDGNSDVIRALVSICPESLEK 79 (252)
Q Consensus 13 d~~g~t~L~~A~---~~g~~~~v~~Ll~~~~~~~~----------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 79 (252)
|..|.||||+|+ ..|+.+++++|++.+++... ..|..|.||||+|+..|+.+++++|++++ .+++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcCc
Confidence 477999999999 78999999999998865211 13458999999999999999999999998 67888
Q ss_pred cC--------------CCCchHHHHHHHcCChHHHHHHHH---HHhcccccccccccCCCCCcHHHHHHhCCh-------
Q 025505 80 LT--------------SNGETALHLAVKKSRSDAFEALVD---EAKNHRKEHLFTWKDKEGNTVLHLATLNKL------- 135 (252)
Q Consensus 80 ~~--------------~~g~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~------- 135 (252)
.+ ..|.||||+|+..|+.+++++|++ .++ +++.+|..|+||||+|+..++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga------~~~~~d~~g~TpLh~A~~~~~~~~~~~~ 195 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA------DLRRQDSRGNTVLHALVAIADNTRENTK 195 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSSHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC------CCcccCCCCCcHHHHHHHhccCchhHHH
Confidence 87 689999999999999999999999 788 899999999999999998776
Q ss_pred --HHHHHHHHhcccccceeeee-------ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 136 --KQIVELLIRENSNRRIMIRI-------NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 136 --~~~v~~Ll~~~~~~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
.+++++|++ .|+++ +.+|..|.||||+|+. .++.+++++|+++|++....
T Consensus 196 ~~~~~v~~Ll~------~ga~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 196 FVTKMYDLLLI------KCAKLFPDTNLEALLNNDGLSPLMMAAK----TGKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp HHHHHHHHHHH------HHHHHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHH------hCcccccccchhhcccCCCCCHHHHHHH----cCCHHHHHHHHHhCCCcccc
Confidence 699999996 77887 6799999999999999 89999999999999988753
No 39
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=4.2e-32 Score=196.97 Aligned_cols=151 Identities=24% Similarity=0.252 Sum_probs=143.1
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcC
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~ 95 (252)
..|+|+.|+..|+.+++++|++.|.+.. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcC
Confidence 4689999999999999999999999775 6889999999999999999999999998 678999999999999999999
Q ss_pred ChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCC
Q 025505 96 RSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQD 175 (252)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 175 (252)
+.+++++|++.++ +++..|..|+||||+|+..++.+++++|++ .|++++.+|..|.||+|+|+.
T Consensus 79 ~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~---- 142 (153)
T 1awc_B 79 HANIVEVLLKHGA------DVNAKDMLKMTALHWATEHNHQEVVELLIK------YGADVHTQSKFCKTAFDISID---- 142 (153)
T ss_dssp CHHHHHHHHTTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----
T ss_pred hHHHHHHHHHcCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHH----
Confidence 9999999999998 789999999999999999999999999996 789999999999999999999
Q ss_pred chhHHHHHHH
Q 025505 176 SAFKEIGWII 185 (252)
Q Consensus 176 ~~~~~~~~~L 185 (252)
.++.+++++|
T Consensus 143 ~~~~~i~~~L 152 (153)
T 1awc_B 143 NGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 8899999987
No 40
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=1.8e-31 Score=212.10 Aligned_cols=171 Identities=20% Similarity=0.221 Sum_probs=112.1
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccc---------cCCCCcHHHHHHHcCCHHHHHHHHHhCCccccc
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEV---------DNSSMIPLHRAALDGNSDVIRALVSICPESLEK 79 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---------~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 79 (252)
++..|..|.||||+|+..|+.+++++|++.+++++... +..|.||||+|+..|+.+++++|++....+++.
T Consensus 98 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 177 (285)
T 1wdy_A 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 177 (285)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC
T ss_pred CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 34455555555555555555555555555555554311 445556666666666666666666552255555
Q ss_pred cCCCCchHHHHHHHcCC----hHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeee
Q 025505 80 LTSNGETALHLAVKKSR----SDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRI 155 (252)
Q Consensus 80 ~~~~g~t~L~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 155 (252)
.+..|.||||+|+..++ .+++++|++.+. +++.++..|+||||+|+..++.+++++|++ ..|+++
T Consensus 178 ~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~~g~~~ 246 (285)
T 1wdy_A 178 CDNMGRNALIHALLSSDDSDVEAITHLLLDHGA------DVNVRGERGKTPLILAVEKKHLGLVQRLLE-----QEHIEI 246 (285)
T ss_dssp CCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTC------CSSCCCTTSCCHHHHHHHTTCHHHHHHHHH-----SSSCCT
T ss_pred cCCCCCCHHHHHHHccccchHHHHHHHHHHcCC------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHh-----ccCCCc
Confidence 66666666666666666 556666666665 666777777788888888777788887775 467777
Q ss_pred ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 156 NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 156 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+.+|..|+||||+|+. .++.+++++|+++|++++.
T Consensus 247 ~~~~~~g~t~l~~A~~----~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 247 NDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp TCCCTTSCCHHHHHHH----TTCHHHHHHHHHHSSCSCC
T ss_pred cccCCCCCcHHHHHHH----cCcHHHHHHHHHcCCCCCc
Confidence 7777788888888777 6777888888888877754
No 41
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=5.4e-32 Score=223.05 Aligned_cols=170 Identities=22% Similarity=0.281 Sum_probs=80.3
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHh----CCccccc-----
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSI----CPESLEK----- 79 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~~----- 79 (252)
++.+|..|.||||+||..|+.++|++|++.+++... ..|.||||+|+..|+.+++++|++. + ..++.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~~~~~ 121 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL---WHGQKPIHLAVMANKTDLVVALVEGAKERG-QMPESLLNEC 121 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---BTTBCHHHHHHHTTCHHHHHHHHHHHHHHT-CCHHHHHTCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---cCCCCHHHHHHHcCCHHHHHHHHHhccccC-CCHHHHHhhc
Confidence 455566666666666666666666666666653321 1233333333333333333333332 1 11111
Q ss_pred ------------cCCCCchHHHHHHHcC--ChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhc
Q 025505 80 ------------LTSNGETALHLAVKKS--RSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE 145 (252)
Q Consensus 80 ------------~~~~g~t~L~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 145 (252)
.+..|.||||+|+..| +.+++++|++.++ +++..|..|+||||+|+..|+.+++++|++.
T Consensus 122 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 195 (364)
T 3ljn_A 122 DEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA------SPTAKDKADETPLMRAMEFRNREALDLMMDT 195 (364)
T ss_dssp CCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred chHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 4444555555555555 5555555555555 4444455555555555555555555555531
Q ss_pred ccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccC
Q 025505 146 NSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 146 ~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
++. ..+.+++..|..|.||||+|+. .++.+++++|+++|++++
T Consensus 196 g~~-~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 196 VPS-KSSLRLDYANKQGNSHLHWAIL----INWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp CSC-SSSCCTTCCCTTCCCTTHHHHT----TTCHHHHHHHHTTTCCTT
T ss_pred ccc-cccccccccCCCCCcHHHHHHH----cCCHHHHHHHHHcCCCCC
Confidence 111 0111144455555555555544 444555555555555443
No 42
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=6.1e-32 Score=222.76 Aligned_cols=170 Identities=18% Similarity=0.184 Sum_probs=152.6
Q ss_pred ccCCCChHHHHHHhCCCHHHHHHHhhc----Cccccc----------------cccCCCCcHHHHHHHcC--CHHHHHHH
Q 025505 12 KNQRGETTMHLLSTDGDAETVRIFGEI----NRELCL----------------EVDNSSMIPLHRAALDG--NSDVIRAL 69 (252)
Q Consensus 12 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~----------------~~~~~g~t~Lh~A~~~g--~~~~v~~L 69 (252)
.+..|.||||+|+..|+.+++++|++. +.+++. ..+..|.||||+|+..| +.+++++|
T Consensus 80 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~L 159 (364)
T 3ljn_A 80 SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKIL 159 (364)
T ss_dssp CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHH
Confidence 345899999999999999999999998 555442 15678999999999999 99999999
Q ss_pred HHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhccccc
Q 025505 70 VSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNR 149 (252)
Q Consensus 70 l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~ 149 (252)
++++ .+++.++..|.||||+|+..|+.+++++|++.+++. ...+++..+..|+||||+|+..|+.+++++|++
T Consensus 160 l~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----- 232 (364)
T 3ljn_A 160 VQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVE----- 232 (364)
T ss_dssp HHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-----
T ss_pred HHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-----
Confidence 9998 789999999999999999999999999999999821 000288999999999999999999999999996
Q ss_pred ceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccC
Q 025505 150 RIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 150 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
.|++++.+|..|.||||+|+. .++.+++++|+++|++..
T Consensus 233 -~gad~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 233 -MGIDVNMEDNEHTVPLYLSVR----AAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHH----TCCHHHHHHHHHHSCHHH
T ss_pred -cCCCCCCCCCCCCCHHHHHHH----hChHHHHHHHHHcCCchh
Confidence 899999999999999999999 889999999999998864
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-31 Score=214.63 Aligned_cols=170 Identities=21% Similarity=0.262 Sum_probs=133.2
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAV 92 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~ 92 (252)
+..|.||||+||..|+.++|+.|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|+
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINY-ANVDGLTALHQACIDDNVDMVKFLVENG-ANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHH
Confidence 44566777777777777777777777777766 6777777777777777777777777777 566777777777777777
Q ss_pred HcCChHHHHHHHHHHhcccccc------------------------------------------------------cccc
Q 025505 93 KKSRSDAFEALVDEAKNHRKEH------------------------------------------------------LFTW 118 (252)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~------------------------------------------------------~~~~ 118 (252)
..|+.+++++|++.+++.+... ....
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 7777777777777765322000 0111
Q ss_pred cCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 119 KDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 119 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQ------ARYDVNIKDYDGWTPLHAAAH----WGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHT------TTCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHh----cCCHHHHHHHHHcCCCCCC
Confidence 34578899999999999999999996 889999999999999999999 8899999999999999875
No 44
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=8.9e-32 Score=222.56 Aligned_cols=180 Identities=17% Similarity=0.160 Sum_probs=159.0
Q ss_pred CccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCC--ccccccCC
Q 025505 5 WPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICP--ESLEKLTS 82 (252)
Q Consensus 5 ~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~--~~~~~~~~ 82 (252)
.+..++.+|..|.||||+|+..|+.++|++|++.|++++. .+..|.||||+|+..|+.+++++|++++. .+++..+.
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~ 233 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR 233 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT
T ss_pred cCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC
Confidence 3445788999999999999999999999999999999987 89999999999999999999999999763 46788899
Q ss_pred CCchHHHHHHHcC---ChHHHHHHHHHHhcccccc--cccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeec
Q 025505 83 NGETALHLAVKKS---RSDAFEALVDEAKNHRKEH--LFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT 157 (252)
Q Consensus 83 ~g~t~L~~a~~~~---~~~~~~~Ll~~~~~~~~~~--~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 157 (252)
.|.||||+|+..+ +.+++++|++.+++.+... ..+..+..|+||||+|+..|+.+++++|++ ..+++++.
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-----~~~~~~n~ 308 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG-----EKGSNKDK 308 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH-----HSCCCTTC
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH-----hcCCCccC
Confidence 9999999999998 8999999999998322100 122367789999999999999999999997 34599999
Q ss_pred ccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 158 VNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 158 ~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 309 ~d~~g~TpL~~A~~----~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQ----EGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCSSC
T ss_pred cCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCccC
Confidence 99999999999999 8899999999999999875
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=6.4e-31 Score=198.96 Aligned_cols=169 Identities=17% Similarity=0.149 Sum_probs=151.4
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCc-cccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINR-ELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLA 91 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a 91 (252)
+..+.||||.|+..|+.+.++.|+..+. +++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDE-VDTEGNTPLNIAVHNNDIEIAKALIDRG-ADINLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHH
Confidence 4678999999999999999999999887 7766 8899999999999999999999999999 78899999999999999
Q ss_pred HHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhccccccee-eeeecccCCCCCHhHhhh
Q 025505 92 VKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIM-IRINTVNKEGQTTLQLCN 170 (252)
Q Consensus 92 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~~~~~~g~t~l~~a~ 170 (252)
+..++.+++++|++.+.. +++..+..|.||||+|+..++.+++++|++ .+ ++++.+|..|.||||+|+
T Consensus 80 ~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATP-----DLNKHNRYGGNALIPAAEKGHIDNVKLLLE------DGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp HHTTCHHHHHHHHHHSCC-----CTTCCCTTSCCSHHHHHHTTCHHHHHHHHH------HCCCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhccCc-----ccccccCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCcCCCCCCCCCHHHHHH
Confidence 999999999999966542 788899999999999999999999999997 55 899999999999999998
Q ss_pred hcCC-CchhHHHHHHHHHhccccCC
Q 025505 171 ANSQ-DSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 171 ~~~~-~~~~~~~~~~L~~~ga~~~~ 194 (252)
..+. ..++.+++++|+++|++++.
T Consensus 149 ~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 149 GLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp HSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred HhccchhhHHHHHHHHHHCCCCCCc
Confidence 7322 12238999999999999875
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=4.2e-31 Score=203.76 Aligned_cols=163 Identities=18% Similarity=0.170 Sum_probs=149.3
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCC-ccccc-cCCCCchHHHHHHH
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICP-ESLEK-LTSNGETALHLAVK 93 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~~g~t~L~~a~~ 93 (252)
|+||||+||..|+.++++.|++.+++.....+..|.||||+|+..|+.+++++|+++++ .++.. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999998876689999999999999999999999999982 23344 78899999999999
Q ss_pred cCChHHHHHHHHHH--hcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhh
Q 025505 94 KSRSDAFEALVDEA--KNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNA 171 (252)
Q Consensus 94 ~~~~~~~~~Ll~~~--~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 171 (252)
.++.+++++|++.+ . +++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 82 ~~~~~~~~~Ll~~g~~~------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKP------DLNKITNQGVTCLHLAVGKKWFEVSQFLIE------NGASVRIKDKFNQIPLHRAAS 149 (228)
T ss_dssp HCCHHHHHHHHSSSSCC------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCc------ccccCCcCCCCHHHHHHHcCCHhHHHHHHH------cCCCccccCCCCCCHHHHHHH
Confidence 99999999999988 5 788889999999999999999999999996 789999999999999999998
Q ss_pred cCCCchhHHHHHHHHHhc-cccCC
Q 025505 172 NSQDSAFKEIGWIIQRAI-AQQSP 194 (252)
Q Consensus 172 ~~~~~~~~~~~~~L~~~g-a~~~~ 194 (252)
.++.+++++|++.| ++.+.
T Consensus 150 ----~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 150 ----VGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp ----TTCHHHHHHHHTTTCCCSCC
T ss_pred ----cCCHHHHHHHHhcCcccccC
Confidence 88999999999999 76654
No 47
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.4e-31 Score=195.78 Aligned_cols=137 Identities=23% Similarity=0.355 Sum_probs=125.9
Q ss_pred cccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCch
Q 025505 7 QLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGET 86 (252)
Q Consensus 7 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 86 (252)
.-++.+|..|+||||+|+..++.++++.|++.|++++. .+..|+||||+|+..|+.+++++|++++ .+++.+|..|.|
T Consensus 28 advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~d~~G~T 105 (169)
T 4gpm_A 28 ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRT 105 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCCCCCCCC
Confidence 34788999999999999999999999999999999988 9999999999999999999999999999 789999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeec
Q 025505 87 ALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT 157 (252)
Q Consensus 87 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 157 (252)
|||+|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++ +|++++-
T Consensus 106 pLh~A~~~g~~~~v~~Ll~~ga------d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~------~GA~ie~ 164 (169)
T 4gpm_A 106 PLHHAAENGHKEVVKLLISKGA------DVNTSDSDGRTPLDLAREHGNEEVVKLLEK------QGGWLEH 164 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHT------C------
T ss_pred HHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCcCC
Confidence 9999999999999999999999 889999999999999999999999999996 7777653
No 48
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1.7e-31 Score=194.32 Aligned_cols=153 Identities=18% Similarity=0.187 Sum_probs=142.9
Q ss_pred CChHHHHHHhCCCHHHHHHHhhc-CccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHc
Q 025505 16 GETTMHLLSTDGDAETVRIFGEI-NRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 94 (252)
+.||||+|+..|+.++++.|++. +.+++. .+..|.||||+ +..|+.+++++|++++ .+++.++..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDA-LNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTC-CCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccc-cCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHc
Confidence 67999999999999999999998 236666 88999999999 9999999999999998 78899999999999999999
Q ss_pred CChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCC
Q 025505 95 SRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQ 174 (252)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 174 (252)
|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++ . ++++.+|..|.||||+|+.
T Consensus 79 ~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~-~~~~~~~~~g~t~l~~A~~--- 142 (156)
T 1bd8_A 79 GFLDTLKVLVEHGA------DVNVPDGTGALPIHLAVQEGHTAVVSFLAA------E-SDLHRRDARGLTPLELALQ--- 142 (156)
T ss_dssp TCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHHHTCHHHHHHHHT------T-SCTTCCCTTSCCHHHHHHH---
T ss_pred CcHHHHHHHHHcCC------CCCCcCCCCCcHHHHHHHhChHHHHHHHHh------c-cCCCCcCCCCCCHHHHHHH---
Confidence 99999999999998 789999999999999999999999999996 5 8899999999999999999
Q ss_pred CchhHHHHHHHHHh
Q 025505 175 DSAFKEIGWIIQRA 188 (252)
Q Consensus 175 ~~~~~~~~~~L~~~ 188 (252)
.++.+++++|+++
T Consensus 143 -~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 143 -RGAQDLVDILQGH 155 (156)
T ss_dssp -SCCHHHHHHHHTT
T ss_pred -cCcHHHHHHHHhh
Confidence 8899999999864
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.4e-31 Score=222.64 Aligned_cols=168 Identities=19% Similarity=0.250 Sum_probs=141.7
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++..+..|.||||+|+..|+.+++++|++.+.+++. .+..|.||||+|+..|+.+++++|++++ .+++..+..|.|||
T Consensus 205 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L 282 (437)
T 1n11_A 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-ESVQGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLGNKSGLTPL 282 (437)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTCCCHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCCCCCCCCCHH
Confidence 445566777777777777777777777777777765 6777888888888888888888888887 56777888888888
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHh
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQL 168 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~ 168 (252)
|+|+..++.+++++|++.+. +++..+..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+
T Consensus 283 ~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~n~~~~~g~t~L~~ 350 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIKHGV------MVDATTRMGYTPLHVASHYGNIKLVKFLLQ------HQADVNAKTKLGYSPLHQ 350 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTC------CTTCCCSSCCCHHHHHHHSSCSHHHHHHHH------TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCc------cCCCCCCCCCCHHHHHHHcCcHHHHHHHHh------cCCCCCCCCCCCCCHHHH
Confidence 88888888888888888888 788889999999999999999999999996 788999999999999999
Q ss_pred hhhcCCCchhHHHHHHHHHhccccCC
Q 025505 169 CNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 169 a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
|+. .++.+++++|+++|++++.
T Consensus 351 A~~----~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 351 AAQ----QGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHH----TTCHHHHHHHHHTTCCSCC
T ss_pred HHH----CChHHHHHHHHHCcCCCCC
Confidence 998 8889999999999998875
No 50
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=9.9e-31 Score=207.78 Aligned_cols=179 Identities=17% Similarity=0.179 Sum_probs=154.3
Q ss_pred ccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCC
Q 025505 3 RLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTS 82 (252)
Q Consensus 3 ~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 82 (252)
+..+++....+..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++..+.
T Consensus 26 ~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 103 (285)
T 1wdy_A 26 EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFLLAAIAGSVKLLKLFLSKG-ADVNECDF 103 (285)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCT
T ss_pred HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCc
Confidence 344554334488899999999999999999999999999987 8999999999999999999999999998 67889999
Q ss_pred CCchHHHHHHHcCChHHHHHHHHHHhccccccccccc----------CCCCCcHHHHHHhCChHHHHHHHHhccccccee
Q 025505 83 NGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWK----------DKEGNTVLHLATLNKLKQIVELLIRENSNRRIM 152 (252)
Q Consensus 83 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~----------~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~ 152 (252)
.|.||||+|+..++.+++++|++.+. +++.. +..|.||||+|+..|+.+++++|++ ..+
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~~~ 172 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGA------NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD-----EMG 172 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTC------CTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHH-----TSC
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCC------CcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHH-----hcC
Confidence 99999999999999999999999988 45544 7788999999999999999999997 448
Q ss_pred eeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 153 IRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 153 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
++++..|..|.||||+|+..+......+++++|+++|++++.
T Consensus 173 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~ 214 (285)
T 1wdy_A 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC
T ss_pred CCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC
Confidence 888888889999999988733322237899999999988764
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=9.4e-31 Score=220.63 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=130.0
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
.++..+..|.||||+||..|+.++|++|+++|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~ 83 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNK-AKVNAKAKDDQTP 83 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCC-SSSCCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTSCCH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCH
Confidence 3567888899999999999999999999998888877 7888889999999999999999999988 6778888889999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|++.++ +++..+..|.||||+|+..|+.+++++|++ .+.+.+..+..|.||||
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t~L~ 151 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNA------NPNLATTAGHTPLHIAAREGHVETVLALLE------KEASQACMTKKGFTPLH 151 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTC------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCCHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCC------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHh------CCCCCcCCCCCCCCHHH
Confidence 999999999999999998888 667777777788887777777777777775 55566666667777777
Q ss_pred hhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 168 LCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 168 ~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+|+. .++.+++++|+++|++++.
T Consensus 152 ~A~~----~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 152 VAAK----YGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp HHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred HHHH----cCCHHHHHHHHhCCCCCCC
Confidence 7766 6667777777777766554
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=6.7e-31 Score=206.34 Aligned_cols=165 Identities=18% Similarity=0.163 Sum_probs=143.8
Q ss_pred CCChHHHHHHhCCCHH----HHHHHhhcCccccc---cccCCCCcHHHHHHHc---CCHHHHHHHHHhCCccccc-----
Q 025505 15 RGETTMHLLSTDGDAE----TVRIFGEINRELCL---EVDNSSMIPLHRAALD---GNSDVIRALVSICPESLEK----- 79 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~----- 79 (252)
.|+||||+|+..|+.+ ++++|++.+.+++. ..+..|.||||+|+.. |+.+++++|++.+ .+++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID-KDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH-HHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC-Ccccchhhhc
Confidence 4899999999999997 66777788998875 4689999999999999 9999999999988 44332
Q ss_pred ------cCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCC-------------CCcHHHHHHhCChHHHHH
Q 025505 80 ------LTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKE-------------GNTVLHLATLNKLKQIVE 140 (252)
Q Consensus 80 ------~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~-------------g~t~Lh~A~~~~~~~~v~ 140 (252)
.|..|.||||+|+..|+.+++++|++.++ +++..+.. |.||||+|+..|+.++++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 153 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA------DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT 153 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 34679999999999999999999999998 67777775 999999999999999999
Q ss_pred HHHhcccccc--eeeeeecccCCCCCHhHhhhhcCCCchhHH-------HHHHHHHhccccC
Q 025505 141 LLIRENSNRR--IMIRINTVNKEGQTTLQLCNANSQDSAFKE-------IGWIIQRAIAQQS 193 (252)
Q Consensus 141 ~Ll~~~~~~~--~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~-------~~~~L~~~ga~~~ 193 (252)
+|++ . .|++++.+|..|+||||+|+..+ .++.+ ++++|+++|+++.
T Consensus 154 ~Ll~-----~~~~ga~~n~~d~~g~TpLh~A~~~~--~~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 154 YLLE-----NPHQPASLEATDSLGNTVLHALVMIA--DNSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp HHHH-----CSSCCCCTTCCCTTSCCHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHh-----ccccCCCcCccCCCCCCHHHHHHHcc--cCCchhhHHHHHHHHHHHHcCCCcc
Confidence 9995 3 78999999999999999998632 23455 9999999999995
No 53
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.4e-31 Score=208.29 Aligned_cols=163 Identities=15% Similarity=0.139 Sum_probs=120.8
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAV 92 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~ 92 (252)
+..|.||||.|+..|+.+.++.|+++|.+++. +..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 45799999999999999999999999999985 478899999999999999999999999 588999999999999999
Q ss_pred HcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCC-CHhHhh--
Q 025505 93 KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQ-TTLQLC-- 169 (252)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~-t~l~~a-- 169 (252)
..|+.+++++|+++++ +++.+|..|+||||+|+..|+.+++++|++ .|++++.++..|. ||+|+|
T Consensus 79 ~~g~~~~v~~Ll~~ga------~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGV------NVNAADSDGWTPLHCAASCNNVQVCKFLVE------SGAAVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp HHTCHHHHHHHHHHTC------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCSSSCCCHHHHCCS
T ss_pred HcCCHHHHHHHHHcCC------CCCccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCcceecCCCCcchHHHHHH
Confidence 9999999999999999 899999999999999999999999999996 8899999998877 999998
Q ss_pred hhcCCCchhHHHHHHHHHhccccCC
Q 025505 170 NANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 170 ~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+. .++.+++++|++.|++.+.
T Consensus 147 ~~----~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 147 ME----EGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp SS----TTCCCHHHHHHHHHHHTTT
T ss_pred hh----hccHHHHHHHHHhhhcccc
Confidence 55 7789999999999999875
No 54
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1e-30 Score=209.64 Aligned_cols=161 Identities=26% Similarity=0.332 Sum_probs=142.8
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccc--------
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKL-------- 80 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-------- 80 (252)
++..|..|.||||+||..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++..
T Consensus 66 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l 143 (299)
T 1s70_B 66 INYANVDGLTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLISQG-AHVGAVNSEGDTPL 143 (299)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCcCCCCCCHH
Confidence 678899999999999999999999999999999987 8999999999999999999999999987 344333
Q ss_pred ----------------------------------------------------CCCCchHHHHHHHcCChHHHHHHHHHHh
Q 025505 81 ----------------------------------------------------TSNGETALHLAVKKSRSDAFEALVDEAK 108 (252)
Q Consensus 81 ----------------------------------------------------~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 108 (252)
+..|.||||+|+..|+.+++++|++.++
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 223 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY 223 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 2457899999999999999999999998
Q ss_pred cccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHh
Q 025505 109 NHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRA 188 (252)
Q Consensus 109 ~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ 188 (252)
+++..|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||+|+|.. . ..+.++.+++.
T Consensus 224 ------d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~gad~~~~d~~g~t~l~~A~~----~-~~~~l~~l~~~ 286 (299)
T 1s70_B 224 ------DVNIKDYDGWTPLHAAAHWGKEEACRILVE------NLCDMEAVNKVGQTAFDVADE----D-ILGYLEELQKK 286 (299)
T ss_dssp ------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCTTTSCCS----G-GGHHHHHHHHH
T ss_pred ------CCCCcCCCCCcHHHHHHhcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHH----H-HHHHHHHHHHH
Confidence 889999999999999999999999999996 889999999999999999985 3 44555555443
No 55
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=5.6e-31 Score=217.76 Aligned_cols=168 Identities=21% Similarity=0.224 Sum_probs=152.5
Q ss_pred cccccccCCCChHHHHHHhCCCHHHHHHHhhcC---ccccccccCCCCcHHHHHHHcC---CHHHHHHHHHhCCccccc-
Q 025505 7 QLASIKNQRGETTMHLLSTDGDAETVRIFGEIN---RELCLEVDNSSMIPLHRAALDG---NSDVIRALVSICPESLEK- 79 (252)
Q Consensus 7 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~- 79 (252)
.-++..|..|.||||+|+..|+.+++++|++.+ .+++. .+..|.||||+|+..+ +.+++++|++++ .+++.
T Consensus 190 a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g-~~~~~~ 267 (373)
T 2fo1_E 190 ADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASAKLLVEKG-AKVDYD 267 (373)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHT-CCSSCC
T ss_pred CCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcchHHHHHHHHHCC-CCcccc
Confidence 346788999999999999999999999999988 67776 8999999999999998 899999999998 45543
Q ss_pred -------cCCCCchHHHHHHHcCChHHHHHHHHHH-hcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccce
Q 025505 80 -------LTSNGETALHLAVKKSRSDAFEALVDEA-KNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRI 151 (252)
Q Consensus 80 -------~~~~g~t~L~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~ 151 (252)
.+..|.||||+|+..|+.+++++|++.+ . +++..|..|+||||+|+..|+.+++++|++ .
T Consensus 268 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~------~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~------~ 335 (373)
T 2fo1_E 268 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS------NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ------Q 335 (373)
T ss_dssp SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------T
T ss_pred cccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC------CccCcCCCCCCHHHHHHHcCCHHHHHHHHH------c
Confidence 5778999999999999999999999987 6 789999999999999999999999999996 8
Q ss_pred eeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhcccc
Q 025505 152 MIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQ 192 (252)
Q Consensus 152 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~ 192 (252)
|++++.+|..|+|||++|+. .++.+++++|++++++.
T Consensus 336 gad~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 336 GASVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCCSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC---
T ss_pred CCCccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccc
Confidence 99999999999999999999 88999999999999875
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.8e-31 Score=209.71 Aligned_cols=172 Identities=18% Similarity=0.192 Sum_probs=143.9
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhc----Ccccc---ccccCCCCcHHHHHHHc---CCHHHHHHHHHhCCcc-
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEI----NRELC---LEVDNSSMIPLHRAALD---GNSDVIRALVSICPES- 76 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~---~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~- 76 (252)
..+..|..|+||||+|+..|+.++|+.|++. +.+++ ...+..|.||||+|+.. |+.+++++|++++...
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 3567889999999999999999999988874 44433 12578999999999987 9999999999987311
Q ss_pred -----cc----ccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCC--------------CCCcHHHHHHhC
Q 025505 77 -----LE----KLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDK--------------EGNTVLHLATLN 133 (252)
Q Consensus 77 -----~~----~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~--------------~g~t~Lh~A~~~ 133 (252)
++ ..+..|.||||+|+..|+.+++++|++.++ +++..+. .|.||||+|+..
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 158 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA------DVQAAANGDFFKKTKGRPGFYFGELPLSLAACT 158 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCC------CcCccccccccccccccccccCCCCHHHHHHHc
Confidence 22 256789999999999999999999999998 6777776 799999999999
Q ss_pred ChHHHHHHHHhcccccc--eeeeeecccCCCCCHhHhhhhcCCCchh---------HHHHHHHHHhccccCC
Q 025505 134 KLKQIVELLIRENSNRR--IMIRINTVNKEGQTTLQLCNANSQDSAF---------KEIGWIIQRAIAQQSP 194 (252)
Q Consensus 134 ~~~~~v~~Ll~~~~~~~--~~~~~~~~~~~g~t~l~~a~~~~~~~~~---------~~~~~~L~~~ga~~~~ 194 (252)
|+.+++++|++ . .|++++.+|..|+||||+|+. .++ .+++++|+++|++++.
T Consensus 159 g~~~~v~~Ll~-----~~~~gad~~~~d~~g~tpLh~A~~----~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 159 NQLAIVKFLLQ-----NSWQPADISARDSVGNTVLHALVE----VADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp TCHHHHHHHHH-----CSSCCCCTTCCCTTSCCHHHHHHH----HCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHh-----cccCCCCceeeCCCCCcHHHHHHH----ccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 99999999995 3 789999999999999999987 444 7899999999999975
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=202.10 Aligned_cols=170 Identities=16% Similarity=0.173 Sum_probs=142.9
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
.++.+|..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~ 112 (240)
T 3eu9_A 34 DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG-ADPSLIDGEGCSC 112 (240)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCH
Confidence 367788999999999999999999999999999888756677999999999999999999999998 6788889999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCCh-HHHHHHHHhcccccceeeeeecccC-CCCCH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKL-KQIVELLIRENSNRRIMIRINTVNK-EGQTT 165 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t~ 165 (252)
||+|+..++.+++++|++.+. +++..+..|.||||+|+..+. .+++++|++ .+++++..+. .|.||
T Consensus 113 l~~A~~~~~~~~~~~Ll~~~~------~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~------~~~~~~~~~~~~g~t~ 180 (240)
T 3eu9_A 113 IHLAAQFGHTSIVAYLIAKGQ------DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT------FNVSVNLGDKYHKNTA 180 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH------TTCCTTCCCTTTCCCH
T ss_pred HHHHHHcCHHHHHHHHHhcCC------CccccCCCCCcHHHHHHHhCChHHHHHHHHh------cCCCcchhhccCCCcH
Confidence 999999999999999999888 677777778888888775554 677777774 6777777775 77788
Q ss_pred hHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 166 LQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 166 l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
||+|+. .++.+++++|+++|++++.
T Consensus 181 L~~A~~----~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 181 LHWAVL----AGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp HHHHHH----HTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 888777 7777788888888777764
No 58
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=9.5e-31 Score=212.70 Aligned_cols=170 Identities=20% Similarity=0.092 Sum_probs=139.8
Q ss_pred cccccc-ccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCC---HHHHHHHHHhCCccccccC
Q 025505 6 PQLASI-KNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGN---SDVIRALVSICPESLEKLT 81 (252)
Q Consensus 6 p~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~~ 81 (252)
+.-++. .|..|+||||+||..|+.++|++|+++|++++. .+..|+||||+|+..|+ .++++.|++.+..+++.++
T Consensus 120 g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 344667 899999999999999999999999999999997 99999999999999998 7888899988766789999
Q ss_pred CCCchHHHHHHH----cCChHHHHHHHHHHhccc--------------ccccccccCCCCCcHHHHHHhCChHHHHHHHH
Q 025505 82 SNGETALHLAVK----KSRSDAFEALVDEAKNHR--------------KEHLFTWKDKEGNTVLHLATLNKLKQIVELLI 143 (252)
Q Consensus 82 ~~g~t~L~~a~~----~~~~~~~~~Ll~~~~~~~--------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll 143 (252)
..|.||||+|+. .++.+++++|++.+.... ...+++..+..|.||||+|+. +++|+
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll 272 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWII 272 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHH
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHH
Confidence 999999999999 899999999999843110 012778889999999999985 88899
Q ss_pred hcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 144 RENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+ . +++.+|..|+||||+|+. .++.+++++|+++|++++.
T Consensus 273 ~------~--~~n~~d~~G~TpLh~A~~----~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 273 A------N--MLNAQDSNGDTCLNIAAR----LGNISIVDALLDYGADPFI 311 (327)
T ss_dssp H------H--TTTCCCTTSCCHHHHHHH----HCCHHHHHHHHHTTCCTTC
T ss_pred H------h--CCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 6 3 588899999999999998 8889999999999999875
No 59
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=3e-30 Score=210.50 Aligned_cols=172 Identities=20% Similarity=0.219 Sum_probs=155.0
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccc---------cccCCCCcHHHHHHHcCCHHHHHHHHHhCCcccc
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCL---------EVDNSSMIPLHRAALDGNSDVIRALVSICPESLE 78 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 78 (252)
.++..|..|.||||+|+..|+.+++++|+++|++++. ..+..|.||||+|+..|+.+++++|+++...+++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 4678899999999999999999999999999988764 1345789999999999999999999987548899
Q ss_pred ccCCCCchHHHHHHHcCC----hHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeee
Q 025505 79 KLTSNGETALHLAVKKSR----SDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIR 154 (252)
Q Consensus 79 ~~~~~g~t~L~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~ 154 (252)
.++..|.|+++.++..+. ..++++|++.++ +++.++..|+||||+|+..++.+++++|++ ..+++
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~ga------d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~-----~~~~~ 265 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA------DVNVRGERGKTPLILAVEKKHLGLVQRLLE-----QEHIE 265 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTC------CTTCCCGGGCCHHHHHHHTTCHHHHHHHHT-----STTCC
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHhhhhHHHHHHHH-----hcCCc
Confidence 999999999998876654 357899999999 889999999999999999999999999997 57899
Q ss_pred eecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 155 INTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 155 ~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
++.+|..|+||||+|+. .++.+++++|+++|++++.
T Consensus 266 vn~~d~~G~TpL~~A~~----~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 266 INDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp TTCBCTTSCBHHHHHHH----TTCHHHHHHHHTTSCSSTT
T ss_pred ccCcCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999 8899999999999998864
No 60
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=4.5e-30 Score=199.10 Aligned_cols=172 Identities=17% Similarity=0.113 Sum_probs=149.0
Q ss_pred ccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHH
Q 025505 10 SIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALH 89 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 89 (252)
+..|+.|.|||++|+..|+.+++++|++.|.+++. .+..|.||||+|+..|+.+++++|+++++......+..|.||||
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQ-PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 45688899999999999999999999999998877 88889999999999999999999999985554555666999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhh
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLC 169 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a 169 (252)
+|+..++.+++++|++.+. +++..+..|.||||+|+..++.+++++|++ .+++++..+..|.||||+|
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~------~~~~~~~~~~~g~t~l~~a 149 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGA------DPSLIDGEGCSCIHLAAQFGHTSIVAYLIA------KGQDVDMMDQNGMTPLMWA 149 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHcCHHHHHHHHHh------cCCCccccCCCCCcHHHHH
Confidence 9999999999999999888 778888999999999999999999999996 7888899999999999998
Q ss_pred hhcCCCchhHHHHHHHHHhccccCCCCC
Q 025505 170 NANSQDSAFKEIGWIIQRAIAQQSPQLP 197 (252)
Q Consensus 170 ~~~~~~~~~~~~~~~L~~~ga~~~~~~~ 197 (252)
+.. ....+++++|++.|++.+....
T Consensus 150 ~~~---~~~~~~~~~L~~~~~~~~~~~~ 174 (240)
T 3eu9_A 150 AYR---THSVDPTRLLLTFNVSVNLGDK 174 (240)
T ss_dssp HHH---CCSSTTHHHHHHTTCCTTCCCT
T ss_pred HHh---CChHHHHHHHHhcCCCcchhhc
Confidence 852 3347899999999999886544
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.3e-30 Score=190.49 Aligned_cols=150 Identities=21% Similarity=0.240 Sum_probs=135.3
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
|+..+..++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++
T Consensus 22 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 99 (172)
T 3v30_A 22 LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGGYTDIVGLLLERD-VDINIYD 99 (172)
T ss_dssp HTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCC
T ss_pred HHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCC
Confidence 5566777899999999999999999999999999999999987 8999999999999999999999999998 7889999
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
..|.||||+|+..++.+++++|++.++ +++..+..|.||||+|+..++.+++++|++ ++.++...+..
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~------~~~~~~~~~~~ 167 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGA------DLTTEADSGYTPMDLAVALGYRKVQQVIEN------HILKLFQSNLV 167 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHH------HHHHHSCC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHhCcHHHHHHHHH------HHHHHhcccCC
Confidence 999999999999999999999999998 789999999999999999999999999996 78888888888
Q ss_pred CCCH
Q 025505 162 GQTT 165 (252)
Q Consensus 162 g~t~ 165 (252)
|.||
T Consensus 168 ~~~p 171 (172)
T 3v30_A 168 PADP 171 (172)
T ss_dssp ----
T ss_pred CCCC
Confidence 8776
No 62
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=206.20 Aligned_cols=167 Identities=14% Similarity=0.067 Sum_probs=143.1
Q ss_pred ccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 6 PQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
|...+..+..|.||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|++++ .+++.+|..|.
T Consensus 11 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~ 88 (229)
T 2vge_A 11 PRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAG-ANVNSPDSHGW 88 (229)
T ss_dssp CCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCC
T ss_pred CccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCC
Confidence 445667788899999999999999999999999999988 8999999999999999999999999998 78999999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccC-CCCCcHHHHH--HhCChHHHHHHHHhcccc--------------
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKD-KEGNTVLHLA--TLNKLKQIVELLIRENSN-------------- 148 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A--~~~~~~~~v~~Ll~~~~~-------------- 148 (252)
||||+|+..|+.+++++|++.++ +++..+ ..|+||||+| +..++.+++++|++.|++
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~ga------~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHGA------AIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTC------CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC------CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence 99999999999999999999998 788876 6999999999 999999999999986542
Q ss_pred ----------cceeee--eecccCCCCCHhHhhhhcCCCchhHHHHHH
Q 025505 149 ----------RRIMIR--INTVNKEGQTTLQLCNANSQDSAFKEIGWI 184 (252)
Q Consensus 149 ----------~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~ 184 (252)
...|.+ ++.+|..|+||||+|+. .++.++++.
T Consensus 163 ~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~----~g~~~~v~~ 206 (229)
T 2vge_A 163 YSAEFGDELSFREGESVTVLRRDGPEETDWWWAAL----HGQEGYVPR 206 (229)
T ss_dssp BCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEE----TTEEEEEEG
T ss_pred HhhccccccCccccccccccccCCCcccHHHHHHH----cCCcceeeh
Confidence 112333 55666677777777776 556666653
No 63
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=1.4e-29 Score=206.46 Aligned_cols=164 Identities=20% Similarity=0.214 Sum_probs=143.3
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhh-cCccccccccCCCCcHHHHHHHcCC----HHHHHHHHHhCCccccccCCC
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGE-INRELCLEVDNSSMIPLHRAALDGN----SDVIRALVSICPESLEKLTSN 83 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~ 83 (252)
....+..|.||||+|+..|+.++|++|++ .|++++. .+..|.|++|.++..++ ..++++|++++ .+++.++..
T Consensus 161 ~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~ 238 (337)
T 4g8k_A 161 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGER 238 (337)
T ss_dssp ---CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGG
T ss_pred cccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCC
Confidence 45567889999999999999999999996 5899987 89999999998876544 46889999999 789999999
Q ss_pred CchHHHHHHHcCChHHHHHHHHH-HhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCC
Q 025505 84 GETALHLAVKKSRSDAFEALVDE-AKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEG 162 (252)
Q Consensus 84 g~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 162 (252)
|.||||+|+..++.+++++|+.. +. +++.+|..|+||||+|+..|+.++|++|++ +|++++.
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~------~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~------~GAd~n~----- 301 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHI------EINDTDSDGKTALLLAVELKLKKIAELLCK------RGASTDC----- 301 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTC------CTTCBCTTSCBHHHHHHHTTCHHHHHHHHT------TSCSSTT-----
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCC------cccCcCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCC-----
Confidence 99999999999999999999985 55 789999999999999999999999999996 7777764
Q ss_pred CCHhHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 163 QTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 163 ~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
.+|||+|+. .++.+++++|+++||+++..
T Consensus 302 ~~~L~~A~~----~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 302 GDLVMTARR----NYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp CCHHHHHHH----TTCHHHHHHHHHTTCCC---
T ss_pred CCHHHHHHH----cCCHHHHHHHHHCcCCCCCC
Confidence 469999998 88999999999999998753
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=2.6e-29 Score=205.44 Aligned_cols=174 Identities=18% Similarity=0.179 Sum_probs=150.2
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhc-CccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEI-NRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
....+..+.|+||.|+..|+.+.++.|+.. +.+++. .|..|.||||+|+..|+.+++++|++++ .+++.++..|.||
T Consensus 17 ~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~ 94 (351)
T 3utm_A 17 AVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHA-SDGRKSTPLHLAAGYNRVRIVQLLLQHG-ADVHAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCC-SSTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCH
T ss_pred eeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 345677899999999999999999999876 667766 8999999999999999999999999999 7889999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhccccc------------------
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNR------------------ 149 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~------------------ 149 (252)
||+|+..|+.+++++|++.++ +++..+..|.||||+|+..|+.+++++|++.|+..
T Consensus 95 L~~A~~~g~~~iv~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~ 168 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLKHGA------CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 168 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH
T ss_pred HHHHHHCCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh
Confidence 999999999999999999998 78888999999999999999999999999865421
Q ss_pred ------------------------------------------------------------------ceeeeeecccCCCC
Q 025505 150 ------------------------------------------------------------------RIMIRINTVNKEGQ 163 (252)
Q Consensus 150 ------------------------------------------------------------------~~~~~~~~~~~~g~ 163 (252)
..|++++.+|..|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 248 (351)
T 3utm_A 169 LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFM 248 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCC
T ss_pred hHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCC
Confidence 13456666777788
Q ss_pred CHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 164 TTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 164 t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
||||+|+. .++.+++++|+++|++++.
T Consensus 249 t~L~~A~~----~g~~~~v~~Ll~~ga~~n~ 275 (351)
T 3utm_A 249 TPLHVAAE----RAHNDVMEVLHKHGAKMNA 275 (351)
T ss_dssp CHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 88888877 7777888888888877764
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=8.5e-30 Score=200.43 Aligned_cols=173 Identities=18% Similarity=0.209 Sum_probs=142.7
Q ss_pred cCCCChHHHHHHhCCCHHHHHHH----hhcCcccccc---ccCCCCcHHHHHH---HcCCHHHHHHHHHhCC--------
Q 025505 13 NQRGETTMHLLSTDGDAETVRIF----GEINRELCLE---VDNSSMIPLHRAA---LDGNSDVIRALVSICP-------- 74 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~L----l~~~~~~~~~---~~~~g~t~Lh~A~---~~g~~~~v~~Ll~~~~-------- 74 (252)
+..|+|+||.|+..|+.++++.| ++.+.+++.. .+..|.||||+|+ ..|+.+++++|++.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 56799999999999999955544 4588888751 2377999999999 6799999999999863
Q ss_pred --ccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccC--------------CCCCcHHHHHHhCChHHH
Q 025505 75 --ESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKD--------------KEGNTVLHLATLNKLKQI 138 (252)
Q Consensus 75 --~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~--------------~~g~t~Lh~A~~~~~~~~ 138 (252)
......|..|.||||+|+..|+.+++++|++.++ +++..+ ..|+||||+|+..|+.++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 155 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA------DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI 155 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC------CcCccccccccCcccccccccCCCCHHHHHHHcCCHHH
Confidence 1234445689999999999999999999999998 677777 689999999999999999
Q ss_pred HHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCc-----hhHHHHHHHHHhccccCC
Q 025505 139 VELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDS-----AFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 139 v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~-----~~~~~~~~L~~~ga~~~~ 194 (252)
+++|++.+. .|++++.+|..|+||||+|+..+... ...+++++|+++|++++.
T Consensus 156 v~~Ll~~~~---~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~ 213 (260)
T 3jxi_A 156 VHYLTENGH---KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213 (260)
T ss_dssp HHHHHHCSS---CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHhccc---cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccc
Confidence 999995100 78999999999999999998622100 016899999999999864
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=5.1e-30 Score=186.59 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=119.3
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCch-H
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGET-A 87 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-~ 87 (252)
.+..++.|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+ .|+.+++++|++++ .+++.++..|.| |
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRP 81 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHH
Confidence 456788999999999999999999999999999988 8999999999985 89999999999998 789999999999 9
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..++.+++++|+++++ +++.++..|+||||+|+..++.+++++|++ .|++++.++..|.||.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGA------RLDVRDAWGRLPVDLAEELGHRDVARYLRA------AAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTC------CSSCCCTTCCCHHHHHHHHTCHHHHHHHSS------CC---------------
T ss_pred HHHHHHCCCHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHhCHHHHHHHHHH------cCCCCCccCcCcCcccc
Confidence 999999999999999999999 889999999999999999999999999995 89999999999999987
Q ss_pred hh
Q 025505 168 LC 169 (252)
Q Consensus 168 ~a 169 (252)
.+
T Consensus 150 ~~ 151 (156)
T 1bi7_B 150 GP 151 (156)
T ss_dssp --
T ss_pred cC
Confidence 54
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=3.3e-29 Score=178.08 Aligned_cols=127 Identities=17% Similarity=0.209 Sum_probs=62.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCC-CC
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKE-GN 124 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~-g~ 124 (252)
.+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+. ++.+++++|++.++ +++.++.. |+
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~------~~~~~~~~~g~ 79 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGA------EPNCADPATLT 79 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC------CSSCCBTTTTB
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC------CCCCcCCCCCC
Confidence 4444444444444444444444444444 3444444444444444444 44445555554444 44444444 45
Q ss_pred cHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhcc
Q 025505 125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIA 190 (252)
Q Consensus 125 t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga 190 (252)
||||+|+..++.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHR------AGARLDVCDAWGRLPVDLAEE----QGHRDIARYLHAATG 135 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHH------TCCCCCCCSSSSSCHHHHHHH----HTCHHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHH----cCCHHHHHHHHHcCC
Confidence 55555555555555555553 444455555555555555554 444555555555544
No 68
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=8.7e-29 Score=197.41 Aligned_cols=161 Identities=18% Similarity=0.082 Sum_probs=150.4
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCC-chHHHHHHH
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNG-ETALHLAVK 93 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~t~L~~a~~ 93 (252)
+|+||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..| .||||+|+.
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCSSSGGGSHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHH
Confidence 599999999999999999999999999988 8999999999999999999999999998 7889999999 899999999
Q ss_pred cCChHHHHHHHHHHhcccccccccccCC-CCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCH-hHhhhh
Q 025505 94 KSRSDAFEALVDEAKNHRKEHLFTWKDK-EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTT-LQLCNA 171 (252)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~-l~~a~~ 171 (252)
.|+.+++++|++.++ .. .+. .|+||||+|+..|+.+++++|++ .|++++.+|..|+|| ||+|+.
T Consensus 139 ~~~~~~v~~Ll~~g~------~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 139 LNDVSIVSYFLSEIP------ST--FDLAILLSCIHITIKNGHVDMMILLLD------YMTSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp TTCHHHHHHHHTTSC------TT--CCCSTHHHHHHHHHHTTCHHHHHHHHH------HHHHTCTTCCCBCCTTHHHHHH
T ss_pred cCCHHHHHHHHhCCC------cc--ccccCCccHHHHHHHcChHHHHHHHHH------cCCCCCcccCCCCChHHHHHHH
Confidence 999999999999987 22 233 88999999999999999999996 899999999999998 999999
Q ss_pred cCCCchhHHHHHHHHHhccccCCC
Q 025505 172 NSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 172 ~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
.++.+++++|+++|++++..
T Consensus 205 ----~~~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 205 ----NKDIEMLQALFKYDINIYSA 224 (285)
T ss_dssp ----HTCHHHHHHHTTSCBCSTTT
T ss_pred ----cCCHHHHHHHHHcCCCCCCC
Confidence 88999999999999999865
No 69
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=3.4e-29 Score=178.01 Aligned_cols=127 Identities=16% Similarity=0.142 Sum_probs=122.3
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCC-CchH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSN-GETA 87 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-g~t~ 87 (252)
++..|..|.||||+|+..|+.+++++|++.+++++. .+..|.||||+|+. |+.+++++|++++ .+++.++.. |.||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCCCCH
Confidence 678899999999999999999999999999999987 89999999999999 9999999999999 788999999 9999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||+|+..++.+++++|++.++ +++..|..|.||||+|+..++.+++++|++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGA------RLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCC------CCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999998 789999999999999999999999999997
No 70
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=2.1e-29 Score=188.38 Aligned_cols=161 Identities=12% Similarity=0.018 Sum_probs=142.5
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCH----HHHHHHHHhCCccccccCCCCchHHHHH
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNS----DVIRALVSICPESLEKLTSNGETALHLA 91 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~a 91 (252)
+.++|+.|+..|+.+.++.++..+.+.. .+..|+||||+|+..|+. +++++|+++| ++++.++..|.||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCcHHHHH
Confidence 5689999999999999999998775431 337799999999999975 5999999999 78999999999999999
Q ss_pred HHcCC------hHHHHHHHHHHhcccccccccccCCCCC-cHHHHHHhCC-----hHHHHHHHHhcccccceeeeeeccc
Q 025505 92 VKKSR------SDAFEALVDEAKNHRKEHLFTWKDKEGN-TVLHLATLNK-----LKQIVELLIRENSNRRIMIRINTVN 159 (252)
Q Consensus 92 ~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~g~-t~Lh~A~~~~-----~~~~v~~Ll~~~~~~~~~~~~~~~~ 159 (252)
+..++ .+++++|++.|+ +++.+|..|+ ||||+|+..+ ..+++++|++ ..|++++.+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Ga------din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~-----~~gad~~~~d 151 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGA------DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS-----QSGLQLLIKD 151 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTC------CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT-----STTCCTTCCC
T ss_pred HHcCCcchhhHHHHHHHHHHCCC------CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH-----hcCCCCcccC
Confidence 99987 478999999999 8999999999 9999999844 4579999995 4899999999
Q ss_pred CCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 160 KEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 160 ~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
..|+||||+|.. .++.+++++|.++..+.+.
T Consensus 152 ~~G~TpL~~A~~----~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 152 KWGLTALEFVKR----CQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp TTSCCHHHHHHT----TTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHH----cCCHHHHHHHHHHHHHHhc
Confidence 999999999998 8899999999988766553
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.8e-28 Score=182.33 Aligned_cols=146 Identities=17% Similarity=0.226 Sum_probs=135.3
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
|+..+..++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.+|
T Consensus 25 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d 102 (179)
T 3f6q_A 25 LDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASHGHRDIVQKLLQYK-ADINAVN 102 (179)
T ss_dssp HHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccC
Confidence 4555777889999999999999999999999999999999988 8999999999999999999999999999 7889999
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCC
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKE 161 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 161 (252)
..|.||||+|+..++.+++++|++.++ +++..+..|.||||+|+..++.+++++|++ .|++++..+..
T Consensus 103 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~------~g~~~~~~~~~ 170 (179)
T 3f6q_A 103 EHGNVPLHYACFWGQDQVAEDLVANGA------LVSICNKYGEMPVDKAKAPLRELLRERAEK------MGQNLNRIPYK 170 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTC------CSSBCCTTSCCGGGGSCHHHHHHHHHHHHH------TTCCCSCBCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCC------CcchhccCCCCcHHHHHHHHHHHHHHHHHH------hhcCcccCCcc
Confidence 999999999999999999999999999 889999999999999999999999999996 77777765543
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=195.62 Aligned_cols=165 Identities=17% Similarity=0.181 Sum_probs=151.6
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCcc--ccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINRE--LCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHL 90 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 90 (252)
+...++++|.|+..|+.+.++.++..+.+ ++. .|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~-~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLLDYVVNI-ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH
Confidence 34567889999999999999999988766 555 899999999999999999999999999966899999999999999
Q ss_pred HH-----HcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCH
Q 025505 91 AV-----KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTT 165 (252)
Q Consensus 91 a~-----~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 165 (252)
|+ ..++.+++++|++.+. ..+..+..|+||||+|+..|+.+++++|++ .|++++.+|..|+||
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~------~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~------~gad~n~~d~~G~Tp 219 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGN------INAKASQAGQTALMLAVSHGRVDVVKALLA------CEADVNVQDDDGSTA 219 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCC------CccccCCCCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCCH
Confidence 99 6688999999999998 778888999999999999999999999996 899999999999999
Q ss_pred hHhhhhcCCCchhHHHHHHHHH-hccccCC
Q 025505 166 LQLCNANSQDSAFKEIGWIIQR-AIAQQSP 194 (252)
Q Consensus 166 l~~a~~~~~~~~~~~~~~~L~~-~ga~~~~ 194 (252)
||+|+. .++.+++++|++ .|++++.
T Consensus 220 Lh~A~~----~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 220 LMCACE----HGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHHHHH----HTCHHHHHHHHTSTTCCTTC
T ss_pred HHHHHH----CCCHHHHHHHHhcCCCCCcC
Confidence 999999 889999999999 8998875
No 73
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.1e-27 Score=175.12 Aligned_cols=129 Identities=23% Similarity=0.313 Sum_probs=122.2
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
-++..|..|+||||+|+. |+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||
T Consensus 30 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~ 106 (162)
T 1ihb_A 30 NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLP 106 (162)
T ss_dssp CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCH
Confidence 367889999999999999 999999999999999987 8999999999999999999999999999 7889999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||+|+..++.+++++|++.+++ .++..+..|.||||+|+..++.+++++|++
T Consensus 107 L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 107 LHLAAKEGHLRVVEFLVKHTAS-----NVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHccCC-----CCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999983 368899999999999999999999999997
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1e-27 Score=175.88 Aligned_cols=134 Identities=22% Similarity=0.205 Sum_probs=125.3
Q ss_pred cccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC
Q 025505 2 ARLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT 81 (252)
Q Consensus 2 l~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 81 (252)
++..+..++..+..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++
T Consensus 28 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 105 (165)
T 3twr_A 28 CTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLVKHG-AVVNVAD 105 (165)
T ss_dssp CCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCcC
Confidence 4445666778889999999999999999999999999999987 8999999999999999999999999999 7889999
Q ss_pred CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 82 SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 82 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
..|.||||+|+..++.+++++|+++++ +++.+|..|.||||+|+. ++.+++++|++
T Consensus 106 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 106 LWKFTPLHEAAAKGKYEICKLLLQHGA------DPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC------CCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 999999999999999999999999998 889999999999999877 88999999996
No 75
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.6e-27 Score=173.72 Aligned_cols=129 Identities=25% Similarity=0.347 Sum_probs=123.4
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
.++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 39 DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTP 116 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCH
Confidence 3678899999999999999999999999999999987 8999999999999999999999999999 7889999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||+|+..++.+++++|++.++ +++..|..|.||||+|+..++.+++++|++
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNGA------DVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999998 788999999999999999999999999996
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.6e-27 Score=169.40 Aligned_cols=127 Identities=20% Similarity=0.249 Sum_probs=118.3
Q ss_pred ccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHH
Q 025505 10 SIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALH 89 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 89 (252)
......+.||||+|+..|+.+++++|++.|.+++. .|..|.||||+|+..|+.+++++|++++ .+++.+|..|.||||
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLH 85 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHH
Confidence 34456789999999999999999999999999987 8999999999999999999999999998 788999999999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
+|+..++.+++++|++.++ +++..|..|+||||+|+..++.+++++|++
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGA------DVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCC------CCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999998 788999999999999999999999999996
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3.1e-27 Score=171.60 Aligned_cols=129 Identities=22% Similarity=0.265 Sum_probs=122.5
Q ss_pred ccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 6 PQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
+..++..|..|.||||+ +..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.
T Consensus 26 ~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (156)
T 1bd8_A 26 LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGA 102 (156)
T ss_dssp CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSC
T ss_pred CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCC
Confidence 44678889999999999 999999999999999999987 8999999999999999999999999999 78899999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||||+|+..|+.+++++|++. . +++..|..|.||||+|+..|+.+++++|++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~-~------~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAE-S------DLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTT-S------CTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHhChHHHHHHHHhc-c------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 999999999999999999998 6 788999999999999999999999999996
No 78
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=5.3e-27 Score=163.99 Aligned_cols=123 Identities=31% Similarity=0.485 Sum_probs=117.6
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHc
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 94 (252)
+|+||||+|+..|+.+++++|++.+.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHc
Confidence 589999999999999999999999999887 8999999999999999999999999998 68889999999999999999
Q ss_pred CChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhc
Q 025505 95 SRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE 145 (252)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 145 (252)
++.+++++|++.+. +++..+..|.||||+|+..++.+++++|++.
T Consensus 79 ~~~~~~~~Ll~~g~------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 79 GHLEVVKLLLEAGA------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp TCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 99999999999998 7889999999999999999999999999973
No 79
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=6.7e-27 Score=163.49 Aligned_cols=126 Identities=30% Similarity=0.421 Sum_probs=119.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHH
Q 025505 49 SSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLH 128 (252)
Q Consensus 49 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh 128 (252)
+|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|+..++.+++++|++.+. +++..+..|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC------CCcccCCCCCcHHH
Confidence 4899999999999999999999998 6788899999999999999999999999999988 78889999999999
Q ss_pred HHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccc
Q 025505 129 LATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQ 191 (252)
Q Consensus 129 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~ 191 (252)
+|+..++.+++++|++ .|++++.+|..|.||+++|+. .++.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLE------AGADVNAKDKNGRTPLHLAAR----NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHTCC
T ss_pred HHHHcChHHHHHHHHH------cCCCCcccCCCCCCHHHHHHH----cCcHHHHHHHHHcCCC
Confidence 9999999999999996 788999999999999999998 8899999999999985
No 80
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=5e-27 Score=170.11 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=118.1
Q ss_pred ccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHH
Q 025505 12 KNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLA 91 (252)
Q Consensus 12 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a 91 (252)
.|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 107 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWA 107 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHH
Confidence 578899999999999999999999999999987 8999999999999999999999999998 78899999999999999
Q ss_pred HHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHH
Q 025505 92 VKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELL 142 (252)
Q Consensus 92 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L 142 (252)
+..++.+++++|++.++ +++.++..|.||||+|+..|+.+++++|
T Consensus 108 ~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 108 TEHNHQEVVELLIKYGA------DVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999998 7889999999999999999999999987
No 81
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=6.7e-27 Score=171.82 Aligned_cols=131 Identities=16% Similarity=0.225 Sum_probs=124.8
Q ss_pred ccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCc
Q 025505 6 PQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGE 85 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 85 (252)
+..++.+|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.
T Consensus 26 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 103 (167)
T 3v31_A 26 ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIVKMLLDCG-VDVNEYDWNGG 103 (167)
T ss_dssp SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSC
T ss_pred CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcCCCCCC
Confidence 344788999999999999999999999999999999987 8999999999999999999999999999 78899999999
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||||+|+..++.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 104 TPLLYAVHGNHVKCVKMLLESGA------DPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999999998 788999999999999999999999999997
No 82
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.7e-26 Score=173.47 Aligned_cols=129 Identities=18% Similarity=0.168 Sum_probs=123.4
Q ss_pred ccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 8 LASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 8 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
.++..|..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~ 137 (192)
T 2rfm_A 60 KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETP 137 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCH
T ss_pred ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCH
Confidence 3677889999999999999999999999999999987 8999999999999999999999999998 7889999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
||+|+..++.+++++|++.++ +++.+|..|.||||+|+..++.+++++|++
T Consensus 138 L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 138 LIVASKYGRSEIVKKLLELGA------DISARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC------CTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 999999999999999999998 789999999999999999999999999997
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=3.9e-27 Score=167.33 Aligned_cols=127 Identities=24% Similarity=0.253 Sum_probs=118.2
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
....+.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+..++.+++++|++.++ +++..|..|+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA------DVNAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCC
Confidence 4556889999999999999999999998 6889999999999999999999999999999988 78899999999
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhc
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAI 189 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~g 189 (252)
|||+|+..++.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLK------HGADVNAQDKFGKTAFDISIG----NGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCcCcCCCCCCHHHHHHH----CCCHHHHHHHHHcC
Confidence 9999999999999999996 788999999999999999999 88999999999876
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2.8e-27 Score=168.22 Aligned_cols=129 Identities=20% Similarity=0.218 Sum_probs=93.0
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+..++.+++++|++.+. +++..+..|+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t 78 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA------LVNTTGYQNDS 78 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCGGGCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------cccCcCCCCCC
Confidence 6677777777777777777777777776 5666777777777777777777777777777776 66777777788
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccc
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQ 191 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~ 191 (252)
|||+|+..++.+++++|++ .|++++.+|..|.||+++|.. .+..+++++|.+.+..
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~----~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLS------YGASRNAVNIFGLRPVDYTDD----ESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCGGGGCCC----HHHHHHHSCC------
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHhh----ccHHHHHhhccccccC
Confidence 8888888888888888885 677777777888888888776 6677777766655443
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=1.8e-26 Score=172.16 Aligned_cols=142 Identities=22% Similarity=0.212 Sum_probs=128.3
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC-CCCchHHH
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT-SNGETALH 89 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~ 89 (252)
..+..|.||||+|+..|+.++++.|++ +.+++. .|..|.||||+|+..|+.+++++|++++ .+++.++ ..|.||||
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHH
Confidence 346789999999999999999999999 888887 8999999999999999999999999999 6787777 89999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhh
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLC 169 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a 169 (252)
+|+..++.+++++|+++++ +++.+|..|+||||+|+..++ ...+.+++++|
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~~~-----------------------~~~~~~~l~~a 166 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGA------DIEVEDERGLTALELAREILK-----------------------TTPKGNPMQFG 166 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTC------CTTCCCTTSCCHHHHHHHHHH-----------------------TCCCCSHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCC------CCcCCCCCCCCHHHHHHHhcc-----------------------CcccccHHHHH
Confidence 9999999999999999999 889999999999999985321 13568999999
Q ss_pred hhcCCCchhHHHHHHHHHh
Q 025505 170 NANSQDSAFKEIGWIIQRA 188 (252)
Q Consensus 170 ~~~~~~~~~~~~~~~L~~~ 188 (252)
+. .+..+++++|.++
T Consensus 167 ~~----~~~~~i~~~L~~~ 181 (183)
T 3deo_A 167 RR----IGLEKVINVLEGQ 181 (183)
T ss_dssp HH----HHHHHHHHHHHTC
T ss_pred HH----cCHHHHHHHHHHh
Confidence 98 8999999999764
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.4e-26 Score=180.56 Aligned_cols=145 Identities=21% Similarity=0.249 Sum_probs=131.2
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccC-CCCchHHH
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLT-SNGETALH 89 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~ 89 (252)
..+..|.||||+|+..|+.++++.|++ +.+++. .+..|.||||+|+..|+.+++++|++++ .+++.++ ..|.||||
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 40 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHH
Confidence 345689999999999999999999999 889887 8999999999999999999999999999 6787777 88999999
Q ss_pred HHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhh
Q 025505 90 LAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLC 169 (252)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a 169 (252)
+|+..|+.+++++|+++++ +++.+|..|+||||+|+. +.. ...+.|||++|
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga------~~~~~d~~g~t~l~~A~~---------~~~--------------~~~~~~~l~~a 167 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGA------DIEVEDERGLTALELARE---------ILK--------------TTPKGNPMQFG 167 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHH---------HHT--------------TCCCSSHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCC------CCCCCCCCCCcHHHHHHH---------HHh--------------ccCCCCHHHHH
Confidence 9999999999999999999 889999999999999984 221 25689999999
Q ss_pred hhcCCCchhHHHHHHHHHhccc
Q 025505 170 NANSQDSAFKEIGWIIQRAIAQ 191 (252)
Q Consensus 170 ~~~~~~~~~~~~~~~L~~~ga~ 191 (252)
+. .++.+++++|++.+.+
T Consensus 168 ~~----~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 168 RR----IGLEKVINVLEGQVFE 185 (244)
T ss_dssp HH----HHHHHHHHHHHHHHEE
T ss_pred HH----cChHHHHHHHHHhccc
Confidence 98 9999999999998665
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=3.2e-27 Score=171.73 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=118.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+|+ .++.+++++|++.++ +++.++..|+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~------~~~~~d~~g~t 79 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA------EPNCADPATLT 79 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC------CCCCCCTTTCC
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC------CCCCcCCCCCc
Confidence 6778999999999999999999999998 688999999999999985 899999999999998 88999999999
Q ss_pred -HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCCC
Q 025505 126 -VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSPQ 195 (252)
Q Consensus 126 -~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~~ 195 (252)
|||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+++++|+++|++++..
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~----~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHR------AGARLDVRDAWGRLPVDLAEE----LGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHH------HTCCSSCCCTTCCCHHHHHHH----HTCHHHHHHHSSCC------
T ss_pred HHHHHHHHCCCHHHHHHHHH------cCCCCcccCCCCCCHHHHHHH----hCHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999996 889999999999999999998 88999999999999998753
No 88
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=3.8e-26 Score=176.35 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=126.2
Q ss_pred HHHHhhcCccccc--cccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhc
Q 025505 32 VRIFGEINRELCL--EVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKN 109 (252)
Q Consensus 32 v~~Ll~~~~~~~~--~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 109 (252)
++.|++++++.+. ..+..+.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga- 78 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM-NDPSQPNEEGITALHNAICGANYSIVDFLITAGA- 78 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHS-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-
Confidence 4677888877654 23456778999999999999999999999 6889999999999999999999999999999998
Q ss_pred ccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeeccc-CCCCCHhHhh--hhcCCCchhHHHHHHHH
Q 025505 110 HRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KEGQTTLQLC--NANSQDSAFKEIGWIIQ 186 (252)
Q Consensus 110 ~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~~~~~L~ 186 (252)
+++..|..|+||||+|+..|+.+++++|++ .|++++.++ ..|.||||+| +. .++.+++++|+
T Consensus 79 -----~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~g~tpL~~A~a~~----~~~~~~v~~Ll 143 (229)
T 2vge_A 79 -----NVNSPDSHGWTPLHCAASCNDTVICMALVQ------HGAAIFATTLSDGATAFEKCDPYR----EGYADCATYLA 143 (229)
T ss_dssp -----CTTCCCTTCCCHHHHHHHTTCHHHHHHHHT------TTCCTTCCCSSTTCCTGGGCCTTS----TTHHHHHHHHH
T ss_pred -----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCcccccCCCCCCHHHHHHHHh----cChHHHHHHHH
Confidence 889999999999999999999999999996 889999986 6999999999 77 88999999999
Q ss_pred HhccccCCC
Q 025505 187 RAIAQQSPQ 195 (252)
Q Consensus 187 ~~ga~~~~~ 195 (252)
++|++++..
T Consensus 144 ~~ga~~~~~ 152 (229)
T 2vge_A 144 DVEQSMGLM 152 (229)
T ss_dssp HHHHHTTTS
T ss_pred HcCCCcccc
Confidence 999998753
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=6.1e-27 Score=166.50 Aligned_cols=126 Identities=21% Similarity=0.269 Sum_probs=118.0
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHH
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHL 90 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 90 (252)
.+|..|+||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCCCCCHHHH
Confidence 5789999999999999999999999999999987 8999999999999999999999999998 7889999999999999
Q ss_pred HHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 91 AVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
|+..++.+++++|++.++ +++..|..|.||||+|+..+..+++++|.+
T Consensus 83 A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGA------SRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHTTCHHHHHHHHHTTC------CTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 999999999999999998 789999999999999999888888887764
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=8.3e-27 Score=179.23 Aligned_cols=141 Identities=17% Similarity=0.153 Sum_probs=118.5
Q ss_pred cccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHH
Q 025505 9 ASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETAL 88 (252)
Q Consensus 9 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 88 (252)
++..|..|.||||+||..|+.++++.|++.|++++. .+..|.||||+|+..|+.+++++|++....+++.+|..|.|||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 456678899999999999999999999999999987 8999999999999999999999999993388999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCC
Q 025505 89 HLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEG 162 (252)
Q Consensus 89 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 162 (252)
|+|+..|+.+++++|++.++ +++.++..|.||||+|+..+..++++.|++ .++.....+.++
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~------~~~~~~~~~~~~ 206 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGA------RTDLRNIEKKLAFDMATNAACASLLKKKQG------TDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTC------CSCCCCTTSCCHHHHCCSHHHHHHHC----------------------
T ss_pred HHHHHcCCHHHHHHHHHcCC------CCccccCCCCCHHHHhcchhHHHHHHHHhc------cchhhhccchhh
Confidence 99999999999999999999 889999999999999999999999999996 666666655443
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1e-26 Score=180.81 Aligned_cols=151 Identities=17% Similarity=0.110 Sum_probs=130.0
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAV 92 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~ 92 (252)
+..|.||||+|+..|+.++++.|++.|++++. .|..|.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHH
Confidence 46789999999999999999999999999988 8999999999999999999999999998 789999999999999999
Q ss_pred HcCChHHHHHHHHHHhcccccccccccCCCCC-cHHHHH--HhCChHHHHHHHHhccccc---ceeeeeecccCCCCCHh
Q 025505 93 KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGN-TVLHLA--TLNKLKQIVELLIRENSNR---RIMIRINTVNKEGQTTL 166 (252)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~-t~Lh~A--~~~~~~~~v~~Ll~~~~~~---~~~~~~~~~~~~g~t~l 166 (252)
..++.+++++|+++++ +++..+..|. ||||+| +..|+.+++++|++.++.. ..+......+..+.+++
T Consensus 112 ~~~~~~~v~~Ll~~ga------~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~ 185 (239)
T 1ycs_B 112 SCNNVQVCKFLVESGA------AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDD 185 (239)
T ss_dssp HTTCHHHHHHHHHTTC------CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTT
T ss_pred HcCCHHHHHHHHHcCC------CcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCC
Confidence 9999999999999999 7888887777 999999 7889999999999744321 11222333467788888
Q ss_pred Hhhhh
Q 025505 167 QLCNA 171 (252)
Q Consensus 167 ~~a~~ 171 (252)
+++..
T Consensus 186 eLa~~ 190 (239)
T 1ycs_B 186 ELPMK 190 (239)
T ss_dssp BCCBC
T ss_pred ccccc
Confidence 88776
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1e-27 Score=197.45 Aligned_cols=160 Identities=13% Similarity=0.092 Sum_probs=132.5
Q ss_pred ccccCCCChHHHHHHhCCCHHHHHHHhhcCccccc--cccCCCCcHHHHHHHcCCHHHHHHHHHhCCcc--ccccCCCCc
Q 025505 10 SIKNQRGETTMHLLSTDGDAETVRIFGEINRELCL--EVDNSSMIPLHRAALDGNSDVIRALVSICPES--LEKLTSNGE 85 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~ 85 (252)
...+.+++||||+|+..|+.++|++|++.|+.... ..+..|.||||+|+..|+.+++++|+++++.. .+..+.+ .
T Consensus 86 ~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 86 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-Y 164 (376)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-H
T ss_pred HHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-C
Confidence 34566778999999999999999999999873211 14456789999999999999999999999420 2223333 9
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhcccccccccc--cCCCCCcHHHHHH-hCChHHHHHHHHhcccccceeeeeecccCCC
Q 025505 86 TALHLAVKKSRSDAFEALVDEAKNHRKEHLFTW--KDKEGNTVLHLAT-LNKLKQIVELLIRENSNRRIMIRINTVNKEG 162 (252)
Q Consensus 86 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~--~~~~g~t~Lh~A~-~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 162 (252)
||||+|+..|+.+++++|++.++ +++. .|..|+||||+|+ ..|+.++|++|++ .|. .|
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga------~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~------~ga-------~~ 225 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAP------TEATAMIQAENYYAFRWAAVGRGHHNVINFLLD------CPV-------ML 225 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCG------GGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT------SHH-------HH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCC------ccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh------CCC-------cc
Confidence 99999999999999999999998 6665 7888999999999 9999999999996 442 28
Q ss_pred CCHhHhhhhcCCCchhHHHHHHHHHhccccC
Q 025505 163 QTTLQLCNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 163 ~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
.||+++|+. .++.+++++|++.|++..
T Consensus 226 ~taL~~Aa~----~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 226 AYAEIHEFE----YGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHHHHCTTT----TTTTTHHHHHHHHHHHHH
T ss_pred chHHHHHHH----CCCHHHHHHHHhcCcccc
Confidence 999999998 888999999999999764
No 93
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=1.7e-26 Score=187.58 Aligned_cols=145 Identities=15% Similarity=0.158 Sum_probs=119.4
Q ss_pred ccccccccCCCChHHHHHHhCCC---HHHHHHHhhcC-ccccccccCCCCcHHHHHHH----cCCHHHHHHHHHhC----
Q 025505 6 PQLASIKNQRGETTMHLLSTDGD---AETVRIFGEIN-RELCLEVDNSSMIPLHRAAL----DGNSDVIRALVSIC---- 73 (252)
Q Consensus 6 p~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~~---- 73 (252)
+.-++.+|..|+||||+|+..|+ .++++.|++.+ .+++. .+..|+||||+|+. .|+.+++++|++.+
T Consensus 154 Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~-~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~ 232 (327)
T 1sw6_A 154 GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL-EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWI 232 (327)
T ss_dssp TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE-ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC-CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHH
Confidence 34477899999999999999998 67888888876 56666 89999999999999 89999999999873
Q ss_pred ---------------CccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHH
Q 025505 74 ---------------PESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQI 138 (252)
Q Consensus 74 ---------------~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~ 138 (252)
..+++.++..|.||||.|+. +++|++. +++.+|..|+||||+|+..|+.++
T Consensus 233 ~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--------~~n~~d~~G~TpLh~A~~~g~~~~ 298 (327)
T 1sw6_A 233 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--------MLNAQDSNGDTCLNIAARLGNISI 298 (327)
T ss_dssp HHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--------TTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred hcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--------CCCCCCCCCCCHHHHHHHcCCHHH
Confidence 26788899999999999985 8889887 367889999999999999999999
Q ss_pred HHHHHhcccccceeeeeecccCCCCCHhHhhhh
Q 025505 139 VELLIRENSNRRIMIRINTVNKEGQTTLQLCNA 171 (252)
Q Consensus 139 v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 171 (252)
|++|++ .|++++.+|..|+||||+|+.
T Consensus 299 v~~Ll~------~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 299 VDALLD------YGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHHHH------TTCCTTCCCTTSCCGGGGTCC
T ss_pred HHHHHH------cCCCCcccCCCCCCHHHHHHh
Confidence 999996 899999999999999999986
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=7.8e-26 Score=157.78 Aligned_cols=117 Identities=17% Similarity=0.165 Sum_probs=106.3
Q ss_pred cCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHH
Q 025505 13 NQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAV 92 (252)
Q Consensus 13 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~ 92 (252)
+..|.||||+|+..|+.++++.|++.+.+++. .+..|.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 56789999999999999999999999999987 8999999999999999999999999998 788999999999999999
Q ss_pred HcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHH
Q 025505 93 KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQ 137 (252)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 137 (252)
..++.+++++|++.++ +++..|..|.||||+|+..+..+
T Consensus 82 ~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGA------DKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999998 78999999999999995444333
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=2e-26 Score=172.13 Aligned_cols=127 Identities=7% Similarity=0.028 Sum_probs=115.7
Q ss_pred cccc-CCCChHHHHHHhCCCH----HHHHHHhhcCccccccccCCCCcHHHHHHHcCC------HHHHHHHHHhCCcccc
Q 025505 10 SIKN-QRGETTMHLLSTDGDA----ETVRIFGEINRELCLEVDNSSMIPLHRAALDGN------SDVIRALVSICPESLE 78 (252)
Q Consensus 10 ~~~d-~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~------~~~v~~Ll~~~~~~~~ 78 (252)
+..+ ..|+||||+|+..|+. +++++|+++|++++. ++..|+||||+|+..|+ .+++++|+++| ++++
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin 108 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG-ADIT 108 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSS
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCC
Confidence 3444 7799999999999975 599999999999998 89999999999999987 68899999999 7999
Q ss_pred ccCCCCc-hHHHHHHHcCC-----hHHHHHHHH-HHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHh
Q 025505 79 KLTSNGE-TALHLAVKKSR-----SDAFEALVD-EAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR 144 (252)
Q Consensus 79 ~~~~~g~-t~L~~a~~~~~-----~~~~~~Ll~-~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 144 (252)
.+|..|. ||||+|+..+. .+++++|++ .|+ +++.+|..|.||||+|+..++.+++++|++
T Consensus 109 ~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga------d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL------QLLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC------CTTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC------CCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999 99999999554 468999999 899 899999999999999999999999999996
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=4.6e-25 Score=176.96 Aligned_cols=137 Identities=18% Similarity=0.154 Sum_probs=122.9
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCcccccc-----ccCCCCcHHHHHHHc---CCHHHHHHHHHhCCccccccCCCCchH
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLE-----VDNSSMIPLHRAALD---GNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
..++|+.|+..|+.+.++.|++.+++++.. .+..|.||||+|+.. |+.+++++|++++ .+++.+|..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCCH
Confidence 457799999999999999999999998753 488999999999997 8999999999999 7889999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|++.++ +++.+|..|.||||+|+..++.+++++|++ .+++ .|.||||
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~ga------d~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~------~ga~------~g~tpLh 291 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRA------LVGTVNEAGETALDIARKKHHKECEELLEQ------AQAG------TFAFPLH 291 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CCSCCCTTSCCHHHHHHHHTCHHHHHHHHH------HHHH------TTSSCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------hcCC------CCCChhH
Confidence 999999999999999999999 889999999999999999999999999997 4443 6899999
Q ss_pred hhhh
Q 025505 168 LCNA 171 (252)
Q Consensus 168 ~a~~ 171 (252)
+|+.
T Consensus 292 ~A~~ 295 (301)
T 2b0o_E 292 VDYS 295 (301)
T ss_dssp ----
T ss_pred HHHh
Confidence 9987
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3.5e-25 Score=154.47 Aligned_cols=113 Identities=19% Similarity=0.180 Sum_probs=104.3
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.+..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.++ +++.+|..|+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~t 75 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA------DINAPDKHHIT 75 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC------CTTCCCTTSCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCC
Confidence 3567889999999999999999999999 6789999999999999999999999999999998 88999999999
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhh
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNA 171 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 171 (252)
|||+|+..++.+++++|++ .|++++.+|..|.||+|+|..
T Consensus 76 pL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLS------KGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999996 789999999999999999975
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=1.1e-24 Score=178.87 Aligned_cols=151 Identities=15% Similarity=0.095 Sum_probs=118.1
Q ss_pred ccccCCCChHHHHHHhC-CCHHHHHHHhhcCcccccccc--CCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCch
Q 025505 10 SIKNQRGETTMHLLSTD-GDAETVRIFGEINRELCLEVD--NSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGET 86 (252)
Q Consensus 10 ~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 86 (252)
+..+..+.|+||+|+.. |+.++++.|++.|++++. .+ ..|.||||+|+..|+.+++++|++++ .+++.+|..|.|
T Consensus 193 ~l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~T 270 (368)
T 3jue_A 193 DLGSLHPGALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRG 270 (368)
T ss_dssp ----CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred ccccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCC
Confidence 33445667899999999 999999999999999987 66 88999999999999999999999998 789999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHh
Q 025505 87 ALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTL 166 (252)
Q Consensus 87 ~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l 166 (252)
|||+|+..++.+++++|+++++ +++..|..|.||||+|+..++.+++++|++.+. ...+....+..+.|++
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Ga------d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~---~~~~~~~~~~~~~t~l 341 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGA------DLGARDSEGRDPLTIAMETANADIVTLLRLAKM---REAEAAQGQAGDETYL 341 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCcC------CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CcccccccCCCCCCHH
Confidence 9999999999999999999999 889999999999999999999999999997443 2334445567788888
Q ss_pred Hhhhh
Q 025505 167 QLCNA 171 (252)
Q Consensus 167 ~~a~~ 171 (252)
+++..
T Consensus 342 ~i~~~ 346 (368)
T 3jue_A 342 DIFRD 346 (368)
T ss_dssp -----
T ss_pred HHHHH
Confidence 88654
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=2.8e-25 Score=170.67 Aligned_cols=167 Identities=24% Similarity=0.232 Sum_probs=129.6
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCc--------------cccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCcc
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINR--------------ELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPES 76 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--------------~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 76 (252)
..+-.++++.+++...|....+..+.+.+. ......+..|.||||+|+..|+.+++++|++.+ .+
T Consensus 20 l~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~ 98 (222)
T 3ehr_A 20 LYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR-VG 98 (222)
T ss_dssp SSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTT-CC
T ss_pred eCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCC-CC
Confidence 345566666776666665433322221110 000124567899999999999999999999998 78
Q ss_pred ccccCCCCchHHHHHHHcCChHHHHHHHHH-HhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeee
Q 025505 77 LEKLTSNGETALHLAVKKSRSDAFEALVDE-AKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRI 155 (252)
Q Consensus 77 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 155 (252)
++.++..|.||||+|+..|+.+++++|++. ++ +++.+|..|+||||+|+..|+.+++++|++ .|+++
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~------~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~ 166 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI------ELNQQNKLGDTALHAAAWKGYADIVQLLLA------KGART 166 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC------CCCCCCTTSCCHHHHHHHHTCHHHHHHHHH------HTCCS
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC------CccccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCC
Confidence 899999999999999999999999999998 77 789999999999999999999999999996 89999
Q ss_pred ecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 156 NTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 156 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
+.+|..|.|||++|+. .+..++++.|++.|+....
T Consensus 167 ~~~~~~g~t~l~~A~~----~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 167 DLRNIEKKLAFDMATN----AACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CCCCTTSCCHHHHCCS----HHHHHHHC-----------
T ss_pred ccccCCCCCHHHHhcc----hhHHHHHHHHhccchhhhc
Confidence 9999999999999998 9999999999999998865
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.6e-26 Score=172.40 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=114.2
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccC-CCCCc
Q 025505 47 DNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKD-KEGNT 125 (252)
Q Consensus 47 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t 125 (252)
+..|.||||+|+..|+.++++.|++ + .+++.+|..|.||||+|+..|+.+++++|++.++ +++..+ ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA------DLDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T-SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCCC
Confidence 5578999999999999999999999 6 7889999999999999999999999999999998 788888 88999
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhcccc
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQ 192 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~ 192 (252)
|||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+....++..++..
T Consensus 113 pL~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~~l~~a~~~ 169 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVE------LGADIEVEDERGLTALELARE----ILKTTPKGNPMQFGRRI 169 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTSCCHHHHHHH----HHHTCCCCSHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHH------cCCCCcCCCCCCCCHHHHHHH----hccCcccccHHHHHHHc
Confidence 9999999999999999996 889999999999999999987 65555555555555443
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=2e-23 Score=165.60 Aligned_cols=168 Identities=19% Similarity=0.182 Sum_probs=140.8
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCcccc--------------------c-----cc-----cCCCCcHHHHHHHc
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINRELC--------------------L-----EV-----DNSSMIPLHRAALD 60 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------------------~-----~~-----~~~g~t~Lh~A~~~ 60 (252)
..|..+.++|+++...|+..+.+++...-+... + .. .....++|+.|+..
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~ 140 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKT 140 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhh
Confidence 467889999999999999877776643221110 0 00 01123689999999
Q ss_pred CCHHHHHHHHHhCCcc-----ccccCCCCchHHHHHHHc---CChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHh
Q 025505 61 GNSDVIRALVSICPES-----LEKLTSNGETALHLAVKK---SRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATL 132 (252)
Q Consensus 61 g~~~~v~~Ll~~~~~~-----~~~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~ 132 (252)
|+.+.++.+++.+... ++..+..|.||||+|+.. ++.+++++|++.++ +++.+|..|+||||+|+.
T Consensus 141 ~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga------~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 141 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG------NLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS------CTTCCCTTCCCHHHHHHH
T ss_pred cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC------CccccCCCCCCHHHHHHH
Confidence 9999999999998532 344588999999999999 89999999999999 899999999999999999
Q ss_pred CChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 133 NKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 133 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
.|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++...
T Consensus 215 ~g~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 215 TDNAECLKLLLR------GKASIEIANESGETPLDIAKR----LKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp TTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTTCCC
T ss_pred cCCHHHHHHHHH------cCCCCCCccCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 999999999996 899999999999999999999 8899999999999997643
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=4e-23 Score=176.72 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=116.8
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCcccccc-----ccCCCCcHHHHHHH---cCCHHHHHHHHHhCCccccccCCCCchH
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLE-----VDNSSMIPLHRAAL---DGNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
..+.||.|+..|+.+.|+.|++.|++++.. .+..|.||||+||. .|+.+++++|++++ ++++.+|..|.||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 347799999999999999999999998762 27899999999976 89999999999999 7899999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhH
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQ 167 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~ 167 (252)
||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+..|+.+++++|++ .|++++. +|+|
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~------~ga~~~~------~~~h 272 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRA------LVGTVNEAGETALDIARKKHHKECEELLEQ------AQAGTFA------FPLH 272 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCC------CCSCCCTTCCCHHHHHHHTTCHHHHHHHHH------TCC--------------
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------hCCCCCC------Ccce
Confidence 999999999999999999999 899999999999999999999999999996 7777765 4666
Q ss_pred hh
Q 025505 168 LC 169 (252)
Q Consensus 168 ~a 169 (252)
.+
T Consensus 273 ~~ 274 (497)
T 3lvq_E 273 VD 274 (497)
T ss_dssp --
T ss_pred ee
Confidence 54
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=5.5e-25 Score=181.16 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=104.1
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCccc---cccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccc--cCCCCc
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINREL---CLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEK--LTSNGE 85 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~g~ 85 (252)
..|..|.||||+||..|+.++|++|+++|++. +. .+.. .||||+|+..|+.+++++|++++ .+++. .+..|.
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~ 199 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI-QAEN-YHAFRLAAENGHLHVLNRLCELA-PTEATAMIQAENY 199 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH-SHHH-HHHHHHHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc-CCCC-CCHHHHHHHCCCHHHHHHHHHcC-CccchhccCCCCC
Confidence 45567889999999999999999999999752 22 2222 89999999999999999999999 56665 888899
Q ss_pred hHHHHHH-HcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhccc
Q 025505 86 TALHLAV-KKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (252)
Q Consensus 86 t~L~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~ 147 (252)
||||+|+ ..|+.+++++|++.+. . |.||||+|+..|+.+++++|++.++
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga------~-------~~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPV------M-------LAYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHH------H-------HHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCC------c-------cchHHHHHHHCCCHHHHHHHHhcCc
Confidence 9999999 9999999999999765 2 7899999999999999999998664
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=4.8e-25 Score=171.84 Aligned_cols=140 Identities=21% Similarity=0.273 Sum_probs=124.4
Q ss_pred CCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHH
Q 025505 14 QRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVK 93 (252)
Q Consensus 14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~ 93 (252)
..+.+++++++..|+.+.+..+...+.+ .+..|.||||+|+..|+.++++.|++ + .+++.+|..|.||||+|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD----VVSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH----HHHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHH
T ss_pred CCCccHHHHHHHcCCCcccccccccccc----cccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHH
Confidence 5677888888888887776665554444 34578999999999999999999999 6 7889999999999999999
Q ss_pred cCChHHHHHHHHHHhcccccccccccC-CCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhh
Q 025505 94 KSRSDAFEALVDEAKNHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNA 171 (252)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 171 (252)
.|+.+++++|+++++ +++..+ ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 87 ~g~~~~v~~Ll~~ga------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGA------DLDHRDMRGGLTALHMAAGYVRPEVVEALVE------LGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HTCHHHHHHHHHTTC------CTTCCCSSSCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHcCC------CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCcHHHHHHH
Confidence 999999999999999 788888 789999999999999999999996 799999999999999999986
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=1.5e-22 Score=160.56 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=114.9
Q ss_pred CChHHHHHHhCCCHHHHHHHhhcCcccccc-----ccCCCCcHHHHHHHc---CCHHHHHHHHHhCCccccccCCCCchH
Q 025505 16 GETTMHLLSTDGDAETVRIFGEINRELCLE-----VDNSSMIPLHRAALD---GNSDVIRALVSICPESLEKLTSNGETA 87 (252)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 87 (252)
..++|+.|+..|+.+.+..+++.|.+++.. .+..|.||||+|+.. |+.+++++|++++ .+++.+|..|.||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCH
Confidence 347899999999999999999999986432 478899999999999 8999999999999 7899999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHHHHhCChHHHHHHHHhcc
Q 025505 88 LHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIREN 146 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~ 146 (252)
||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.+++++|++.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~ga------d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKA------SIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999 89999999999999999999999999999743
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.1e-22 Score=134.67 Aligned_cols=92 Identities=27% Similarity=0.479 Sum_probs=74.6
Q ss_pred CCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHc
Q 025505 15 RGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (252)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~ 94 (252)
+|+||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 478888888888888888888888888876 7888888888888888888888888887 67777888888888888888
Q ss_pred CChHHHHHHHHHHh
Q 025505 95 SRSDAFEALVDEAK 108 (252)
Q Consensus 95 ~~~~~~~~Ll~~~~ 108 (252)
++.+++++|++.|+
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 88888888887765
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=3.5e-22 Score=160.18 Aligned_cols=126 Identities=23% Similarity=0.272 Sum_probs=116.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCccccc------cCCCCchHHHHHHHc---CChHHHHHHHHHHhcccccccccccC
Q 025505 50 SMIPLHRAALDGNSDVIRALVSICPESLEK------LTSNGETALHLAVKK---SRSDAFEALVDEAKNHRKEHLFTWKD 120 (252)
Q Consensus 50 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~ 120 (252)
..++|+.|+..|+.+.++.|++.+ .+++. .+..|.||||+|+.. ++.+++++|++.++ +++.+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga------dvn~~d 223 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG-QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG------HLDAKA 223 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS------CTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC-CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC------CCCCCC
Confidence 346799999999999999999998 55665 688999999999997 89999999999999 889999
Q ss_pred CCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhcccc
Q 025505 121 KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQ 192 (252)
Q Consensus 121 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~ 192 (252)
..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++.
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~----~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARK----KHHKECEELLEQAQAGT 285 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH------TTCCCSCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCC
Confidence 999999999999999999999996 899999999999999999999 88999999999999984
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.9e-22 Score=172.53 Aligned_cols=128 Identities=23% Similarity=0.267 Sum_probs=116.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccc------CCCCchHHHHHHH---cCChHHHHHHHHHHhcccccccccccC
Q 025505 50 SMIPLHRAALDGNSDVIRALVSICPESLEKL------TSNGETALHLAVK---KSRSDAFEALVDEAKNHRKEHLFTWKD 120 (252)
Q Consensus 50 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~g~t~L~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 120 (252)
..+.||.|+..|+.+.++.|++.+ .+++.. +..|.||||+|+. .|+.+++++|++.|+ +++.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g-~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga------~vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANG-QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG------HLDAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTT-CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC------CTTCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhc-ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC------CCCccC
Confidence 346799999999999999999999 666666 8899999999966 899999999999999 899999
Q ss_pred CCCCcHHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccCC
Q 025505 121 KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQSP 194 (252)
Q Consensus 121 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~~ 194 (252)
..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++...
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARK----KHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHH------TCCCCSCCCTTCCCHHHHHHH----TTCHHHHHHHHHTCC----
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHHhCCCCCC
Confidence 999999999999999999999996 899999999999999999998 8899999999999999876
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=2.1e-22 Score=133.25 Aligned_cols=88 Identities=33% Similarity=0.491 Sum_probs=52.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCcHHHH
Q 025505 50 SMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTVLHL 129 (252)
Q Consensus 50 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~ 129 (252)
|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..++.+++++|++.++ +++.+|..|+||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCccCCCCCCHHHH
Confidence 556666666666666666666655 4555556666666666666666666666665555 455555556666666
Q ss_pred HHhCChHHHHHHHHh
Q 025505 130 ATLNKLKQIVELLIR 144 (252)
Q Consensus 130 A~~~~~~~~v~~Ll~ 144 (252)
|+..++.+++++|++
T Consensus 75 A~~~~~~~~~~~Ll~ 89 (93)
T 1n0q_A 75 AARNGHLEVVKLLLE 89 (93)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 666666666666654
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=7.8e-23 Score=140.73 Aligned_cols=108 Identities=19% Similarity=0.290 Sum_probs=94.4
Q ss_pred cccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHH
Q 025505 11 IKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHL 90 (252)
Q Consensus 11 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 90 (252)
.+|+.|+||||+||..|+.+++++|++.+++++. .+..|.||||+|+..|+.+++++|++++ .+++.++..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHH
Confidence 5688899999999999999999999999988887 8888999999999999999999999988 6788888899999999
Q ss_pred HHHcCChHHHHHHHHHHhcccccccccccCCCCCcH
Q 025505 91 AVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNTV 126 (252)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~ 126 (252)
|+..++.+++++|+++++ +++..+..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga------~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGA------DVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSS------SHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCC------CCCcCCcccccc
Confidence 999999999999999888 788888888776
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=4.4e-22 Score=163.34 Aligned_cols=128 Identities=17% Similarity=0.155 Sum_probs=117.8
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHhCCccccccC--CCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 49 SSMIPLHRAALD-GNSDVIRALVSICPESLEKLT--SNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 49 ~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.+.|+||+|+.. |+.++++.|++++ .+++..+ ..|.||||+|+..++.+++++|+++++ +++..|..|+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~G-advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga------dvn~~d~~G~T 270 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHG-ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA------NVNQADSAGRG 270 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTT-CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcC-CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCC------CCCCCCCCCCC
Confidence 445799999999 9999999999999 6788887 899999999999999999999999999 89999999999
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHhHhhhhcCCCchhHHHHHHHHHhccccC
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTLQLCNANSQDSAFKEIGWIIQRAIAQQS 193 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~L~~~ga~~~ 193 (252)
|||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|++.+....
T Consensus 271 pLh~A~~~g~~~~v~~LL~------~Gad~~~~d~~G~TpL~~A~~----~g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLK------RGADLGARDSEGRDPLTIAME----TANADIVTLLRLAKMREA 328 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHC---
T ss_pred HHHHHHHcCcHHHHHHHHH------CcCCCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCcc
Confidence 9999999999999999996 899999999999999999999 889999999999986554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=1.9e-22 Score=138.78 Aligned_cols=108 Identities=27% Similarity=0.352 Sum_probs=100.5
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.|..|.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+..++.+++++|++.++ +++..|..|+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~d~~g~t 77 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA------DVNARSKDGNT 77 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC------CTTCCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC------CCcccCCCCCC
Confidence 7889999999999999999999999998 6789999999999999999999999999999998 78899999999
Q ss_pred HHHHHHhCChHHHHHHHHhcccccceeeeeecccCCCCCHh
Q 025505 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKEGQTTL 166 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~l 166 (252)
|||+|+..++.+++++|++ .|++++.++..|.+|-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~------~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDA------KGADVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHT------TSSSHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHH------cCCCCCcCCccccccc
Confidence 9999999999999999996 8999999999999875
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=1.9e-20 Score=127.69 Aligned_cols=99 Identities=20% Similarity=0.260 Sum_probs=80.5
Q ss_pred ccCccccccccCCCChHHHHHHhCCCHHHHHHHhhcCccccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCC
Q 025505 3 RLWPQLASIKNQRGETTMHLLSTDGDAETVRIFGEINRELCLEVDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTS 82 (252)
Q Consensus 3 ~~~p~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 82 (252)
...|......|.+|.||||+|+..|+.+++++|++.+++++. .|..|.||||+|+..|+.+++++|++++ .+++.+|.
T Consensus 11 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~ 88 (110)
T 2zgd_A 11 SGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDK 88 (110)
T ss_dssp CC---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT
T ss_pred cCCCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccc
Confidence 345777788889999999999999999999999999998887 7889999999999999999999999988 67888888
Q ss_pred CCchHHHHHHHcCChHHHHHH
Q 025505 83 NGETALHLAVKKSRSDAFEAL 103 (252)
Q Consensus 83 ~g~t~L~~a~~~~~~~~~~~L 103 (252)
.|.||||+|+..++.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999988876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=4.3e-19 Score=120.96 Aligned_cols=90 Identities=24% Similarity=0.313 Sum_probs=84.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccCCCCchHHHHHHHcCChHHHHHHHHHHhcccccccccccCCCCCc
Q 025505 46 VDNSSMIPLHRAALDGNSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFEALVDEAKNHRKEHLFTWKDKEGNT 125 (252)
Q Consensus 46 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (252)
.+.+|.||||+|+..|+.+++++|++++ .+++.+|..|.||||+|+..++.+++++|++.++ +++..|..|+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~t 92 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA------DVXAQDKFGKT 92 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCC
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CccccccCCCc
Confidence 6788999999999999999999999998 7889999999999999999999999999999998 78999999999
Q ss_pred HHHHHHhCChHHHHHHH
Q 025505 126 VLHLATLNKLKQIVELL 142 (252)
Q Consensus 126 ~Lh~A~~~~~~~~v~~L 142 (252)
|||+|+..++.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999976
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=58.59 E-value=9.1 Score=19.48 Aligned_cols=18 Identities=33% Similarity=0.470 Sum_probs=13.0
Q ss_pred HHHHHhCCCHHHHHHHhh
Q 025505 20 MHLLSTDGDAETVRIFGE 37 (252)
Q Consensus 20 L~~A~~~g~~~~v~~Ll~ 37 (252)
+..||..|+++.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 667778888887777643
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=47.42 E-value=47 Score=27.21 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=38.7
Q ss_pred HhCCCHHHHHHHhhcCcccccc-------------ccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 025505 24 STDGDAETVRIFGEINRELCLE-------------VDNSSMIPLHRAALDGNSDVIRALVSI 72 (252)
Q Consensus 24 ~~~g~~~~v~~Ll~~~~~~~~~-------------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 72 (252)
+..|+...|+..+..|.+..-. .-.-|.|.+|+|++..+.+++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4679999999999988776531 123688999999999999999888863
No 117
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=24.69 E-value=13 Score=22.01 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=14.0
Q ss_pred CCCCccccCCCcCCCCC
Q 025505 236 HLPDSLVREDTLAGKSL 252 (252)
Q Consensus 236 ~~pgg~~~~~~~~g~~~ 252 (252)
..|-||.+-.+.+|||+
T Consensus 28 ~LPeGW~~v~H~SGmP~ 44 (79)
T 3le4_A 28 PLPDGWIMTFHNSGVPV 44 (79)
T ss_dssp CCCTTEEEEECTTSSEE
T ss_pred cCCCccEEEEecCCceE
Confidence 45889988889999875
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=21.54 E-value=1e+02 Score=24.33 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=41.4
Q ss_pred ccCCCChHHHHHHhCCCHHHHHHHhhc--CccccccccCCCCcHHHHHHHcCCHHHHHHHHHhC--CccccccCCCCchH
Q 025505 12 KNQRGETTMHLLSTDGDAETVRIFGEI--NRELCLEVDNSSMIPLHRAALDGNSDVIRALVSIC--PESLEKLTSNGETA 87 (252)
Q Consensus 12 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~ 87 (252)
.|..|+..+......+..+....+++. |.-.....+..|...+..+......+-...+++.- ....-..|..|...
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~V 148 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHV 148 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHH
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHH
Confidence 345555555555555555544444432 11122234555555555555555444333333321 11122335555555
Q ss_pred HHHHHHcCChHHHHHHH
Q 025505 88 LHLAVKKSRSDAFEALV 104 (252)
Q Consensus 88 L~~a~~~~~~~~~~~Ll 104 (252)
+..+.....++..+.++
T Consensus 149 iQk~l~~~~~~~~~~i~ 165 (351)
T 3gvo_A 149 VQKCIECVQPQSLQFII 165 (351)
T ss_dssp HHHHHHHSCGGGTHHHH
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 55555444444333333
Done!