BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025508
         (251 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q1PE49|4ON1_ARATH Protein At-4/1 OS=Arabidopsis thaliana GN=At4g26020 PE=1 SV=1
          Length = 247

 Score =  283 bits (725), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 150/247 (60%), Positives = 190/247 (76%)

Query: 1   MAATSDDGMESLLSDFDQIYEDFKRAISEVQLLRSSCNAETKRREALEITCNTLKKENER 60
           MAATSD+ M  LLS FDQIYEDFK  ++E+ + RS  N E+ RRE LEI+   LK+ENER
Sbjct: 1   MAATSDEQMNLLLSSFDQIYEDFKIGLNEINVYRSKSNVESSRREVLEISNKNLKEENER 60

Query: 61  ARNSYTESLENLADQLERKAKCQSLKEELKRVNDEHLSKEYELRKVIDSIKQDYAAKARD 120
            +  YTESL N ADQLE + KC SLKEELKRVNDE+ SKE+E R  ++S++Q +  K  +
Sbjct: 61  LKKLYTESLNNFADQLEHRTKCHSLKEELKRVNDENKSKEHEHRNALESLRQKHVTKVEE 120

Query: 121 FEDQIRSLMLEKATNEATISNLHQDLAAHKMHMQTLAKKLDQVKFDVEMKYNLEIQDLKD 180
            E +IRSL++EKATN+  I  L QDL A+K H+Q ++KKLD+V  +VE KY LEIQDLKD
Sbjct: 121 LEYKIRSLLVEKATNDMVIDRLRQDLTANKSHIQAMSKKLDRVVTEVECKYELEIQDLKD 180

Query: 181 CLLLEQEEKNELNKRVQDLEKELLMNRTKMAEHNRDLTSVRSVETLKLKIMKLRKENEIL 240
           CLL+EQ EKN+++ ++Q L+KELL++RT +AE  RD TS R VETLK K+MKLRKENEIL
Sbjct: 181 CLLMEQAEKNDISNKLQSLQKELLISRTSIAEKQRDTTSNRQVETLKQKLMKLRKENEIL 240

Query: 241 KRKLNSS 247
           KRKL+SS
Sbjct: 241 KRKLSSS 247


>sp|C5DJH6|SP110_LACTC Spindle pole body component 110 OS=Lachancea thermotolerans (strain
           ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=SPC110 PE=3 SV=1
          Length = 838

 Score = 33.5 bits (75), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 14/117 (11%)

Query: 52  NTLKKENERARNSYTESLENL----ADQLERKAKCQSLKEELKRVNDEHLSKEYELRK-- 105
           N +++EN  A N   E  E L     +    + KC SL + L  V DE      ELRK  
Sbjct: 103 NGIEEENGGASNPLKEQQETLYKLNVENYNLRVKCNSLLKFLNNVTDEG-----ELRKNL 157

Query: 106 -VIDSIKQDYAAKARDFEDQIRSLMLEKATNE-ATISNLHQDLAAHKMHMQTLAKKL 160
            VID + Q++  K ++ +   RSL L+   +E    ++L QD  +++  M++L KKL
Sbjct: 158 AVIDEL-QEWKGKYQELKKAYRSLQLKFDQSEHKDQADLEQDARSNEKEMRSLQKKL 213


>sp|P85120|DAPLE_XENLA Daple-like protein OS=Xenopus laevis GN=ccdc88c PE=1 SV=1
          Length = 2058

 Score = 31.2 bits (69), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 33/56 (58%)

Query: 113 DYAAKARDFEDQIRSLMLEKATNEATISNLHQDLAAHKMHMQTLAKKLDQVKFDVE 168
           D + K RD E + + L+ +   ++ T++ L +DL   K+  Q ++ +LD++  ++E
Sbjct: 880 DLSTKTRDLERENKDLLQQMTVDKRTLATLREDLVLEKLKTQQMSSELDKLSLELE 935


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.126    0.324 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,376,658
Number of Sequences: 539616
Number of extensions: 2937353
Number of successful extensions: 20993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 2075
Number of HSP's that attempted gapping in prelim test: 17519
Number of HSP's gapped (non-prelim): 4577
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)