Query 025511
Match_columns 251
No_of_seqs 105 out of 121
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 11:48:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025511.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025511hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wi9a_ a.4.5.47 (A:) Hypothet 100.0 2.7E-33 1.9E-37 209.4 6.7 64 139-202 4-67 (72)
2 d2cg4a1 a.4.5.32 (A:4-66) Regu 96.1 0.0048 3.5E-07 42.0 5.4 45 145-189 8-52 (63)
3 d1ub9a_ a.4.5.28 (A:) Hypothet 96.1 0.012 8.9E-07 41.8 7.8 67 146-212 20-89 (100)
4 d1ufma_ a.4.5.47 (A:) COP9 sig 95.9 0.009 6.6E-07 43.2 6.3 58 146-203 20-77 (84)
5 d2cyya1 a.4.5.32 (A:5-64) Puta 95.7 0.0075 5.5E-07 40.5 5.0 44 146-189 7-50 (60)
6 d2cfxa1 a.4.5.32 (A:1-63) Tran 95.7 0.01 7.4E-07 40.4 5.7 44 145-188 8-51 (63)
7 d1i1ga1 a.4.5.32 (A:2-61) LprA 95.5 0.0089 6.5E-07 40.4 4.8 43 146-188 7-49 (60)
8 d2etha1 a.4.5.28 (A:1-140) Put 95.4 0.042 3.1E-06 40.6 8.9 67 146-212 36-105 (140)
9 d3ctaa1 a.4.5.28 (A:5-89) Ta10 95.2 0.034 2.5E-06 39.6 7.4 54 157-210 22-75 (85)
10 d3broa1 a.4.5.28 (A:3-137) Tra 95.0 0.055 4E-06 39.6 8.3 63 147-209 34-101 (135)
11 d1biaa1 a.4.5.1 (A:1-63) Bioti 95.0 0.027 1.9E-06 38.3 6.0 42 145-186 8-49 (63)
12 d2fbia1 a.4.5.28 (A:5-140) Pro 94.9 0.056 4.1E-06 39.8 8.0 66 146-211 34-102 (136)
13 d1z91a1 a.4.5.28 (A:8-144) Org 94.6 0.032 2.3E-06 41.4 6.1 60 146-205 37-99 (137)
14 d2bv6a1 a.4.5.28 (A:5-140) Tra 94.6 0.057 4.1E-06 39.9 7.5 66 145-210 37-105 (136)
15 d2a61a1 a.4.5.28 (A:5-143) Tra 94.2 0.091 6.6E-06 38.8 7.8 68 146-213 34-104 (139)
16 d1j5ya1 a.4.5.1 (A:3-67) Putat 94.0 0.06 4.4E-06 36.3 5.9 54 142-197 7-61 (65)
17 d1p4xa1 a.4.5.28 (A:1-125) Sta 93.7 0.087 6.4E-06 39.1 6.9 64 148-211 40-108 (125)
18 d1jgsa_ a.4.5.28 (A:) Multiple 93.7 0.16 1.2E-05 37.5 8.4 65 145-209 37-104 (138)
19 d2frha1 a.4.5.28 (A:102-216) P 93.5 0.12 8.8E-06 37.7 7.2 65 148-212 39-108 (115)
20 d1s3ja_ a.4.5.28 (A:) Putative 93.4 0.22 1.6E-05 36.7 8.7 68 146-213 39-109 (143)
21 d1lj9a_ a.4.5.28 (A:) Transcri 93.3 0.26 1.9E-05 36.7 9.0 67 146-212 33-102 (144)
22 d3deua1 a.4.5.28 (A:2-141) Tra 93.1 0.18 1.3E-05 36.9 7.8 66 147-212 36-105 (140)
23 d1p4xa2 a.4.5.28 (A:126-250) S 93.0 0.21 1.5E-05 37.2 8.1 65 148-212 39-108 (125)
24 d1hsja1 a.4.5.28 (A:373-487) S 92.9 0.16 1.1E-05 37.2 7.2 66 147-212 37-107 (115)
25 d2d1ha1 a.4.5.50 (A:1-109) Hyp 92.7 0.098 7.1E-06 37.5 5.6 51 152-202 32-85 (109)
26 d2hr3a1 a.4.5.28 (A:2-146) Pro 92.4 0.37 2.7E-05 35.5 8.7 67 148-214 40-110 (145)
27 d1ldja1 a.4.5.34 (A:687-776) A 91.9 0.15 1.1E-05 37.2 5.8 56 145-200 27-90 (90)
28 d2fbha1 a.4.5.28 (A:8-144) Tra 91.8 0.45 3.3E-05 34.5 8.5 65 146-210 32-100 (137)
29 d1lnwa_ a.4.5.28 (A:) MexR rep 91.5 0.67 4.9E-05 34.1 9.3 63 147-209 41-106 (141)
30 d2fxaa1 a.4.5.28 (A:6-167) Pro 91.2 0.46 3.3E-05 36.8 8.4 72 147-218 46-120 (162)
31 d1jhfa1 a.4.5.2 (A:2-72) LexA 90.3 0.34 2.5E-05 33.3 6.1 48 142-189 9-58 (71)
32 d1iuya_ a.4.5.34 (A:) Cullin-3 90.3 0.32 2.4E-05 35.2 6.2 59 142-200 26-92 (92)
33 d2gaua1 a.4.5.4 (A:152-232) Tr 89.9 0.32 2.4E-05 32.9 5.7 50 157-209 30-79 (81)
34 d2ev0a1 a.4.5.24 (A:2-62) Mang 88.6 0.46 3.4E-05 32.0 5.6 45 143-187 8-52 (61)
35 d1sfxa_ a.4.5.50 (A:) Hypothet 88.5 0.72 5.3E-05 33.0 7.0 67 146-212 24-91 (109)
36 d1r1ta_ a.4.5.5 (A:) SmtB repr 88.0 1.2 8.6E-05 31.9 7.9 61 147-208 28-88 (98)
37 d1ft9a1 a.4.5.4 (A:134-213) CO 87.8 0.3 2.2E-05 33.4 4.3 49 158-208 32-80 (80)
38 d3bwga1 a.4.5.6 (A:5-82) Trans 87.4 0.9 6.6E-05 31.0 6.7 53 144-197 4-62 (78)
39 d1mkma1 a.4.5.33 (A:1-75) Tran 86.1 1.2 8.5E-05 30.3 6.7 55 146-203 9-64 (75)
40 d1ku9a_ a.4.5.36 (A:) DNA-bind 85.2 1.3 9.2E-05 32.2 6.9 52 153-204 38-92 (151)
41 d1z05a1 a.4.5.63 (A:10-80) Tra 84.5 0.86 6.3E-05 30.4 5.2 43 145-187 9-51 (71)
42 d2hs5a1 a.4.5.6 (A:25-93) Puta 83.6 0.67 4.9E-05 31.2 4.3 39 158-197 27-65 (69)
43 d2isya1 a.4.5.24 (A:2-64) Iron 83.4 1.3 9.2E-05 30.0 5.7 45 143-187 10-54 (63)
44 d2bgca1 a.4.5.4 (A:138-237) Li 81.0 1.1 8.2E-05 32.5 5.0 50 158-210 33-83 (100)
45 d1u2wa1 a.4.5.5 (A:12-119) Cad 80.2 4 0.00029 29.5 8.0 62 148-209 37-98 (108)
46 d1r1ua_ a.4.5.5 (A:) Metal-sen 78.9 6 0.00044 27.9 8.4 61 147-208 23-83 (94)
47 d3e5ua1 a.4.5.4 (A:148-227) Ch 78.7 1 7.4E-05 30.5 3.9 49 157-208 31-79 (80)
48 d1i5za1 a.4.5.4 (A:138-206) Ca 77.7 1.3 9.2E-05 29.4 4.1 39 157-199 30-68 (69)
49 d2p4wa1 a.4.5.64 (A:1-194) Tra 77.1 3.1 0.00023 32.1 6.9 55 146-201 19-78 (194)
50 d2fbka1 a.4.5.28 (A:8-179) Tra 77.0 0.74 5.4E-05 35.3 3.0 57 156-212 79-138 (172)
51 d1dpua_ a.4.5.16 (A:) C-termin 76.6 2.6 0.00019 29.1 5.6 49 145-193 9-61 (69)
52 d1stza1 a.4.5.51 (A:14-100) He 74.6 3.7 0.00027 29.2 6.2 54 141-194 7-63 (87)
53 d2hyec1 a.4.5.34 (C:676-759) C 74.6 3.1 0.00023 29.5 5.7 56 145-200 23-84 (84)
54 d1zyba1 a.4.5.4 (A:148-220) Pr 71.8 2.1 0.00015 29.0 4.0 40 157-200 28-67 (73)
55 d1r8da_ a.6.1.3 (A:) Multidrug 70.7 8.2 0.0006 27.0 7.3 64 158-226 4-69 (109)
56 d1lvaa3 a.4.5.35 (A:511-574) C 70.7 2.2 0.00016 28.5 3.8 53 141-193 6-60 (64)
57 d2zcwa1 a.4.5.4 (A:118-199) Tr 70.0 4 0.00029 27.5 5.2 50 157-209 30-79 (82)
58 d1z6ra1 a.4.5.63 (A:12-81) Mlc 68.2 4.5 0.00033 26.9 5.1 43 145-187 8-50 (70)
59 d1d5ya1 a.4.1.8 (A:3-56) Rob t 62.7 5.5 0.0004 24.8 4.4 38 142-179 3-42 (54)
60 d1aoya_ a.4.5.3 (A:) Arginine 60.7 10 0.00076 26.5 6.0 60 141-203 8-72 (78)
61 d1hw1a1 a.4.5.6 (A:5-78) Fatty 56.6 8.8 0.00064 25.9 4.9 35 155-189 26-60 (74)
62 d1sfua_ a.4.5.19 (A:) 34L {Yab 56.3 8 0.00058 27.1 4.7 51 139-189 7-57 (70)
63 d1cora_ a.3.1.1 (A:) Cytochrom 51.8 3.1 0.00023 27.5 1.8 15 199-213 66-80 (82)
64 d1c53a_ a.3.1.1 (A:) Cytochrom 51.1 3.5 0.00026 26.8 1.9 15 199-213 64-78 (79)
65 d1h1oa1 a.3.1.4 (A:12-93) Cyto 50.8 3.8 0.00028 27.0 2.1 16 199-214 60-75 (82)
66 d1bl0a1 a.4.1.8 (A:9-62) MarA 50.1 15 0.0011 22.5 4.9 40 142-181 3-44 (54)
67 d2htja1 a.4.5.73 (A:1-73) P fi 48.6 15 0.0011 25.8 5.0 43 146-188 4-46 (73)
68 d1c52a_ a.3.1.1 (A:) Cytochrom 48.1 6.8 0.00049 28.0 3.3 27 199-225 75-111 (131)
69 d1r8ea1 a.6.1.3 (A:3-120) Tran 47.2 25 0.0018 24.6 6.4 65 157-226 4-71 (118)
70 d1zara1 a.4.5.56 (A:2-90) Rio2 46.3 8.9 0.00065 27.7 3.7 55 151-208 24-80 (89)
71 d2ve8a1 a.4.5.67 (A:745-811) D 46.2 21 0.0015 24.4 5.5 49 141-189 3-51 (67)
72 d1ulya_ a.4.5.58 (A:) Hypothet 45.7 12 0.00089 28.1 4.6 54 147-201 24-82 (190)
73 d351ca_ a.3.1.1 (A:) Cytochrom 45.6 4.8 0.00035 26.6 1.9 15 199-213 66-80 (82)
74 d1v4ra1 a.4.5.6 (A:1-100) Tran 44.9 2.7 0.00019 30.0 0.5 53 143-196 14-72 (100)
75 d1ynra1 a.3.1.1 (A:1-80) Cytoc 43.7 5.3 0.00039 26.4 1.9 16 198-213 63-78 (80)
76 d1ls9a_ a.3.1.1 (A:) Cytochrom 43.6 5 0.00037 26.5 1.8 25 188-214 61-85 (91)
77 d1ctja_ a.3.1.1 (A:) Cytochrom 43.3 4.7 0.00034 26.8 1.6 25 188-214 59-83 (89)
78 d1fy7a_ d.108.1.1 (A:) Histone 43.1 30 0.0022 29.3 7.2 63 150-218 199-262 (273)
79 d1f1fa_ a.3.1.1 (A:) Cytochrom 42.9 5.3 0.00038 26.2 1.8 15 199-213 68-82 (88)
80 d2j5pa1 a.4.5.67 (A:1261-1329) 40.7 26 0.0019 24.0 5.3 49 140-188 5-53 (69)
81 d1c75a_ a.3.1.1 (A:) Cytochrom 39.4 6.7 0.00048 25.8 1.9 17 198-214 54-70 (71)
82 d2ofya1 a.35.1.3 (A:3-84) Puta 38.4 27 0.002 23.7 5.2 64 144-228 15-78 (82)
83 d1r9ja3 c.48.1.1 (A:527-669) T 38.0 12 0.00085 28.5 3.4 26 158-183 104-129 (143)
84 d1wvec1 a.3.1.1 (C:602-675) p- 37.5 7.7 0.00056 25.7 2.0 16 198-213 56-71 (74)
85 d1nrwa_ c.108.1.10 (A:) Hypoth 37.2 37 0.0027 25.4 6.3 25 191-215 71-98 (285)
86 d2hoea1 a.4.5.63 (A:10-71) N-a 36.8 25 0.0018 22.7 4.5 41 148-189 5-45 (62)
87 d1gpua3 c.48.1.1 (A:535-680) T 36.6 13 0.00092 28.2 3.4 26 158-183 107-132 (146)
88 d1gdva_ a.3.1.1 (A:) Cytochrom 36.6 7.6 0.00055 25.3 1.8 16 199-214 65-80 (85)
89 d1xmaa_ a.4.5.61 (A:) Predicte 36.5 60 0.0044 22.4 7.0 48 166-213 38-90 (103)
90 d2esha1 a.4.5.61 (A:4-117) Hyp 36.1 31 0.0023 24.5 5.4 46 168-213 44-93 (114)
91 d1yava3 d.37.1.1 (A:13-144) Hy 35.7 10 0.00076 26.5 2.6 21 177-197 96-116 (132)
92 d1kv9a1 a.3.1.6 (A:561-664) Qu 35.5 8.3 0.0006 26.5 1.9 17 199-215 80-96 (104)
93 d2gxba1 a.4.5.19 (A:140-198) Z 35.0 37 0.0027 22.9 5.2 44 144-187 4-47 (59)
94 d2ozua1 d.108.1.1 (A:507-776) 34.7 16 0.0012 31.0 4.1 58 147-209 193-252 (270)
95 d2fswa1 a.4.5.69 (A:3-104) Hyp 34.7 35 0.0026 24.0 5.4 49 154-202 31-83 (102)
96 d1cyja_ a.3.1.1 (A:) Cytochrom 34.0 8.8 0.00064 25.3 1.8 15 199-213 67-81 (90)
97 d1p2fa1 a.4.6.1 (A:121-217) Re 33.9 14 0.001 25.0 3.0 35 192-226 19-54 (97)
98 d1c6sa_ a.3.1.1 (A:) Cytochrom 33.9 8 0.00058 25.4 1.6 17 199-215 65-81 (87)
99 d1cy9a_ e.10.1.1 (A:) DNA topo 33.8 32 0.0023 27.1 5.6 71 140-213 37-128 (260)
100 d1cc5a_ a.3.1.1 (A:) Cytochrom 33.4 9.8 0.00071 25.1 2.0 15 198-212 67-81 (83)
101 d1fcdc1 a.3.1.4 (C:1-80) Flavo 33.4 9.5 0.00069 24.9 1.9 16 199-214 61-76 (80)
102 d1xd7a_ a.4.5.55 (A:) Hypothet 33.0 24 0.0018 25.0 4.3 57 148-204 10-66 (127)
103 d1pdnc_ a.4.1.5 (C:) Paired pr 32.8 45 0.0032 24.1 5.9 81 140-224 18-100 (123)
104 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 32.7 20 0.0015 23.8 3.5 29 159-187 27-55 (59)
105 d1kx7a_ a.3.1.1 (A:) Mono-heme 32.5 7.1 0.00052 25.8 1.1 17 197-213 63-79 (81)
106 d1z05a1 a.4.5.63 (A:10-80) Tra 32.0 14 0.001 24.0 2.6 23 205-227 9-31 (71)
107 d1q1ha_ a.4.5.41 (A:) Transcri 31.5 74 0.0054 22.6 6.8 53 147-199 23-79 (88)
108 d1m70a1 a.3.1.4 (A:1-92) Cytoc 31.1 12 0.00087 24.3 2.1 16 199-214 73-88 (92)
109 d1gksa_ a.3.1.1 (A:) Cytochrom 30.9 12 0.00086 24.9 2.1 24 188-213 53-76 (78)
110 d1b4aa1 a.4.5.3 (A:4-78) Argin 30.9 71 0.0052 21.7 6.4 54 147-203 7-64 (75)
111 d1cnoa_ a.3.1.1 (A:) Cytochrom 30.8 12 0.00088 24.5 2.1 16 199-214 67-82 (86)
112 d1a56a_ a.3.1.1 (A:) Cytochrom 30.5 9.6 0.0007 25.0 1.5 18 196-213 62-79 (81)
113 d1q06a_ a.6.1.3 (A:) Transcrip 30.1 83 0.0061 22.0 7.3 63 158-225 2-66 (127)
114 d1z7ua1 a.4.5.69 (A:1-108) Hyp 30.1 39 0.0028 24.1 5.1 48 155-202 31-82 (108)
115 d2f2ea1 a.4.5.69 (A:5-146) Hyp 27.9 48 0.0035 24.7 5.4 49 154-202 31-81 (142)
116 d1p6ra_ a.4.5.39 (A:) Penicill 27.9 26 0.0019 23.8 3.5 43 161-204 32-77 (82)
117 d1fcdc2 a.3.1.4 (C:81-174) Fla 27.9 14 0.001 24.7 2.0 16 198-213 77-92 (94)
118 d1ys7a1 a.4.6.1 (A:128-233) Tr 27.7 20 0.0014 24.9 2.9 36 192-227 26-62 (106)
119 d1xj3a1 d.110.3.2 (A:154-259) 27.6 16 0.0012 22.9 2.3 14 189-202 5-18 (106)
120 d1z6ra1 a.4.5.63 (A:12-81) Mlc 27.1 20 0.0015 23.4 2.7 24 204-227 7-30 (70)
121 d2b0la1 a.4.5.66 (A:167-257) G 27.0 52 0.0038 23.7 5.2 43 156-202 34-81 (91)
122 d1xmka1 a.4.5.19 (A:294-366) Z 27.0 48 0.0035 22.9 4.8 45 145-189 8-53 (73)
123 d2gf5a1 a.77.1.2 (A:89-191) FA 26.9 54 0.0039 22.3 5.2 73 141-228 6-79 (103)
124 d1b0aa2 c.58.1.2 (A:2-122) Tet 26.7 25 0.0018 25.5 3.4 25 168-192 73-97 (121)
125 d2cg4a1 a.4.5.32 (A:4-66) Regu 26.4 22 0.0016 22.8 2.8 22 206-227 9-30 (63)
126 d1yyva1 a.4.5.69 (A:9-122) Put 26.2 51 0.0037 23.6 5.1 49 154-202 35-87 (114)
127 d2g7ga1 a.4.1.9 (A:9-73) Putat 25.8 25 0.0019 22.5 3.0 24 204-227 7-30 (65)
128 d1x6va3 c.37.1.4 (A:34-228) Ad 25.8 14 0.001 26.3 1.8 38 115-159 157-195 (195)
129 d1iwga6 d.225.1.1 (A:725-812) 25.3 38 0.0028 22.3 4.0 41 158-199 7-47 (88)
130 d1utxa_ a.35.1.3 (A:) Putative 25.3 57 0.0041 20.4 4.7 51 153-223 11-61 (66)
131 d1e29a_ a.3.1.1 (A:) Photosyst 24.7 11 0.00079 26.7 1.0 17 198-214 106-122 (135)
132 d1a4ia2 c.58.1.2 (A:2-126) Tet 24.4 30 0.0022 25.2 3.5 25 168-192 75-99 (125)
133 d1m70a2 a.3.1.4 (A:93-190) Cyt 24.2 17 0.0012 25.2 1.9 16 198-213 81-96 (98)
134 d2hzta1 a.4.5.69 (A:4-98) Puta 23.9 71 0.0052 22.0 5.4 40 154-193 22-62 (95)
135 d1qx2a_ a.39.1.1 (A:) Calbindi 23.8 35 0.0025 21.9 3.4 30 200-229 3-36 (76)
136 d1mz4a_ a.3.1.1 (A:) Cytochrom 23.7 11 0.00082 26.3 0.9 18 199-216 107-124 (131)
137 d1kb0a1 a.3.1.6 (A:579-675) Qu 23.6 14 0.001 25.0 1.3 15 199-213 76-90 (97)
138 d1allb_ a.1.1.3 (B:) Allophyco 23.4 12 0.00085 29.1 1.0 39 191-231 13-53 (161)
139 d2o3fa1 a.4.1.20 (A:1-83) Puta 23.1 23 0.0017 24.3 2.4 28 199-227 16-47 (83)
140 d1wlza1 a.39.1.7 (A:229-311) D 22.9 9.2 0.00067 25.1 0.2 29 197-225 51-81 (83)
141 d1f1ca_ a.3.1.1 (A:) Photosyst 22.5 20 0.0015 24.7 2.1 17 198-214 104-120 (129)
142 d1ylfa1 a.4.5.55 (A:5-142) Hyp 22.3 46 0.0033 23.8 4.2 45 154-200 21-65 (138)
143 d1jboa_ a.1.1.3 (A:) Phycocyan 21.7 10 0.00076 29.4 0.4 40 190-231 12-53 (162)
144 d2phla1 b.82.1.2 (A:11-210) Se 21.6 24 0.0017 27.6 2.6 43 159-209 153-195 (200)
145 d1v9ya_ d.110.3.2 (A:) Direct 21.6 22 0.0016 22.6 2.0 32 187-226 14-45 (113)
146 d1udza_ b.51.1.1 (A:) Isoleucy 21.5 20 0.0015 27.4 2.0 21 161-197 128-148 (179)
147 d1qzza1 a.4.5.29 (A:10-101) Ac 21.4 45 0.0033 23.0 3.8 47 149-196 34-80 (92)
148 d2r1jl1 a.35.1.2 (L:3-68) P22 21.1 64 0.0047 20.0 4.3 59 145-223 5-63 (66)
149 d1olta_ c.1.28.2 (A:) Oxygen-i 20.5 89 0.0065 26.6 6.4 55 144-202 367-425 (441)
150 d2axtl1 f.23.31.1 (L:1-37) Pho 20.5 27 0.0019 21.6 2.0 6 37-42 21-26 (37)
151 d2r8oa3 c.48.1.1 (A:528-663) T 20.4 37 0.0027 24.4 3.3 23 158-180 113-135 (136)
152 d2d1ha1 a.4.5.50 (A:1-109) Hyp 20.2 37 0.0027 23.2 3.1 14 159-172 10-23 (109)
No 1
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97 E-value=2.7e-33 Score=209.39 Aligned_cols=64 Identities=53% Similarity=0.902 Sum_probs=62.3
Q ss_pred CchhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHH
Q 025511 139 GDRDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQA 202 (251)
Q Consensus 139 ~sq~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~E 202 (251)
.++++|++||+|||.+|||+|||||++|||+|||||+|||+|+++|+||||||||||||||||.
T Consensus 4 ~~q~lL~~FI~~Ik~~Kvv~LedLAa~F~lktqd~i~RIq~Le~~g~ltGViDDRGKfIyIS~s 67 (72)
T d1wi9a_ 4 GSSGFLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDRGKFIYITPS 67 (72)
T ss_dssp SSCCHHHHHHHHHHHCSEECHHHHHHHHCSCHHHHHHHHHHHHHHSSSCEEECTTCCEEECCCS
T ss_pred chHHHHHHHHHHHHHCCEeeHHHHHHHcCCcHHHHHHHHHHHHHCCCeeeEEcCCCCEEEEcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999984
No 2
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=96.10 E-value=0.0048 Score=41.95 Aligned_cols=45 Identities=16% Similarity=0.323 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
...++.+..+=-.+..+||...|++...|-.||+.|+++|.|.|+
T Consensus 8 ~~IL~~L~~~~r~s~~eiA~~l~ls~~~v~~Ri~rL~~~GiI~~~ 52 (63)
T d2cg4a1 8 RGILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAGIITGA 52 (63)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeE
Confidence 356778888888899999999999999999999999999999874
No 3
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.06 E-value=0.012 Score=41.84 Aligned_cols=67 Identities=12% Similarity=0.201 Sum_probs=55.4
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~ 212 (251)
..+.|+..+.-+...|||..+|++..-+-..+..|+..|-++.--| -|.+|+.||+.-.+.+..++.
T Consensus 20 ~IL~~L~~~~~~~~~eLa~~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~G~~~~~~~~~ 89 (100)
T d1ub9a_ 20 GIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLS 89 (100)
T ss_dssp HHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHhccCCCeeHHHHHHHHhhccccccHHHHHHhhhceeEEEEcCcCCccccccCCHHHHHHHHHHHH
Confidence 3577887777789999999999999999999999999999997665 456688899987666666553
No 4
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.87 E-value=0.009 Score=43.20 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=51.2
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAE 203 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EE 203 (251)
....+.+--..+.|++||..|+++++++-.-|..|..+|+|.|.||.-..+||....+
T Consensus 20 ni~~is~~Y~~Isl~~la~~l~l~~~evE~~l~~mI~~~~i~akIDq~~g~V~F~~~e 77 (84)
T d1ufma_ 20 NLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETRE 77 (84)
T ss_dssp HHHHHHHSCSEEEHHHHHHHTTSCHHHHHHHHHHHHHTTSSCEEEETTTTEEEECCSS
T ss_pred HHHHHHHhhceeeHHHHHHHHCCCHHHHHHHHHHHHhcCeEEEEEeCCCCEEEECCCC
Confidence 3445677788899999999999999999999999999999999999988899986543
No 5
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.70 E-value=0.0075 Score=40.47 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=39.5
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
..++.+..+=-.+..+||...|++...|..||+.|+++|-|.|.
T Consensus 7 ~Il~~L~~n~r~s~~eiA~~l~ls~~~v~~Ri~~L~~~giI~~~ 50 (60)
T d2cyya1 7 KIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKKF 50 (60)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeE
Confidence 46777888878899999999999999999999999999988764
No 6
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=95.69 E-value=0.01 Score=40.40 Aligned_cols=44 Identities=23% Similarity=0.456 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcce
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSG 188 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTG 188 (251)
...++.+..+=-.+..+||...|++.+.|-.||+.|+++|.|.|
T Consensus 8 ~~IL~~L~~n~r~s~~~iA~~lgis~~tv~~Ri~~L~~~giI~~ 51 (63)
T d2cfxa1 8 LNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQ 51 (63)
T ss_dssp HHHHHHHHHCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeee
Confidence 34677788888889999999999999999999999999999977
No 7
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.51 E-value=0.0089 Score=40.35 Aligned_cols=43 Identities=21% Similarity=0.437 Sum_probs=38.8
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcce
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSG 188 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTG 188 (251)
..+..+..+=-.+..+||...|++.+.|.+||+.|+++|-|.|
T Consensus 7 kIl~~L~~n~r~s~~~lA~~~gls~~~v~~Ri~~L~~~giI~~ 49 (60)
T d1i1ga1 7 IILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEG 49 (60)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 4667788887889999999999999999999999999998875
No 8
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=95.43 E-value=0.042 Score=40.62 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=58.5
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~fI~ 212 (251)
..+.+|..+.=+...+||..+|++.+-+-.-|..|++.|-|+-+-|. |-++|++|+.-.+.+.+...
T Consensus 36 ~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~ 105 (140)
T d2etha1 36 YAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFGEILS 105 (140)
T ss_dssp HHHHHHHHHCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeeecccccchhhhhcCHHHHHHHHHHHH
Confidence 35678888888899999999999999999999999999999999885 66899999998877766544
No 9
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=95.23 E-value=0.034 Score=39.59 Aligned_cols=54 Identities=19% Similarity=0.302 Sum_probs=48.3
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHH
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADY 210 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~f 210 (251)
+..-|||...|++.+-+-.-|+.|++.|-|.=-.|-|++||++|+.-.+.+-+.
T Consensus 22 lt~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT~~G~~~l~~~ 75 (85)
T d3ctaa1 22 LTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTE 75 (85)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeeecccccccceECHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999877665443
No 10
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=95.02 E-value=0.055 Score=39.63 Aligned_cols=63 Identities=17% Similarity=0.290 Sum_probs=51.9
Q ss_pred HHHHHHhc--CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHH
Q 025511 147 FVEYIKKH--KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVAD 209 (251)
Q Consensus 147 FI~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~ 209 (251)
.+.||-.+ +-+.+.|||...+++.+-+-.-|+.|+..|-|.-..|. |+++||+||.-...+..
T Consensus 34 vL~~l~~~~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~~~ 101 (135)
T d3broa1 34 IIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETI 101 (135)
T ss_dssp HHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHHH
T ss_pred HHHHHHHcCCCCCCHHHHHHHHCcCHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccHHHHHHHHH
Confidence 44555544 66999999999999999999999999999999998763 79999999975544443
No 11
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.99 E-value=0.027 Score=38.29 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCc
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRL 186 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~L 186 (251)
...+..+..+..+..++||.+||++..-|-.+|+.|++.|-+
T Consensus 8 ~~iL~~L~~~~~~s~~eLa~~l~vS~~ti~r~i~~L~~~G~~ 49 (63)
T d1biaa1 8 LKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVD 49 (63)
T ss_dssp HHHHHHHTTSSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCCc
Confidence 457778889999999999999999999999999999999863
No 12
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.87 E-value=0.056 Score=39.83 Aligned_cols=66 Identities=11% Similarity=0.147 Sum_probs=56.9
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVADYI 211 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~fI 211 (251)
..+.+|..+.-+...+||..++++.+-+-.-|+.|++.|-|+=.-|. |.++||+|++-.+.+....
T Consensus 34 ~vL~~l~~~~~~t~~~la~~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~ 102 (136)
T d2fbia1 34 RVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMS 102 (136)
T ss_dssp HHHHHHHHHCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeecCccCchhhhccCHHHHHHHHHHH
Confidence 34566777777899999999999999999999999999999988874 6899999999887776654
No 13
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=94.64 E-value=0.032 Score=41.42 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=53.6
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMK 205 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~ 205 (251)
.++.+|..+.-+...+||..++++.+-+-.-|+.|++.|-|+-.-| -|-++|++|+.-..
T Consensus 37 ~vL~~l~~~~~~t~~~La~~~~i~~~~vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~ 99 (137)
T d1z91a1 37 LALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGAL 99 (137)
T ss_dssp HHHHHHHHHSEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHS
T ss_pred HHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHHhhccceEEeecCCCCCeEEEEECHHHHH
Confidence 4667888889999999999999999999999999999999998876 37899999998654
No 14
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=94.62 E-value=0.057 Score=39.92 Aligned_cols=66 Identities=9% Similarity=0.148 Sum_probs=57.6
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHHH
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVADY 210 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~f 210 (251)
...+.+|..+.=+...+||..+|++.+.+-.-|+.|++.|-|+-.-|+ |.++|++|+.-.+.+++.
T Consensus 37 ~~vL~~i~~~~~~t~~~la~~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT~~G~~~~~~~ 105 (136)
T d2bv6a1 37 FLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPEL 105 (136)
T ss_dssp HHHHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEEeecCCcccchhhccCHHHHHHHHHH
Confidence 346788988999999999999999999999999999999999999874 678999999987766543
No 15
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=94.19 E-value=0.091 Score=38.78 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=57.2
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceee---eCCCceEEEcHHHHHHHHHHHHh
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVM---DDRGKYIYISQAEMKAVADYIKR 213 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGVi---DDRGKFIYIS~EEm~aVA~fI~q 213 (251)
..+.+|..+.-+...|||..+|++.+-+-..|+.|++.|-|+=.- |-|+++|++|+.-...+......
T Consensus 34 ~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~ 104 (139)
T d2a61a1 34 DILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIER 104 (139)
T ss_dssp HHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHhcCeeeeeeccCCCCeEEEEECHHHHHHHHHHHHH
Confidence 456777777788999999999999999999999999999887665 45899999999988777665443
No 16
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.02 E-value=0.06 Score=36.35 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHhc-CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceE
Q 025511 142 DLLADFVEYIKKH-KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYI 197 (251)
Q Consensus 142 ~lL~~FI~YIK~~-KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFI 197 (251)
+.+...++++..+ +.|...+||..||++..-+..-|+.|.+.|.. |.-.+|-|+
T Consensus 7 eR~~~Il~~L~~~~~~vs~~~La~~l~VS~~TI~rdi~~L~~~G~~--I~~~~gGY~ 61 (65)
T d1j5ya1 7 ERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYN--IVATPRGYV 61 (65)
T ss_dssp HHHHHHHHHHHHCSSCBCHHHHHHHHTSCHHHHHHHHHHHHHHTCC--CEEETTEEE
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHCCCHHHHHHHHHHHHHCCCe--EEEeCCCEE
Confidence 3456788888775 57999999999999999999999999999862 223456565
No 17
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=93.74 E-value=0.087 Score=39.07 Aligned_cols=64 Identities=19% Similarity=0.444 Sum_probs=53.4
Q ss_pred HHHHHhc--CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHH
Q 025511 148 VEYIKKH--KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYI 211 (251)
Q Consensus 148 I~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI 211 (251)
+.+|-.+ .-+.+.|||...+++..-+-.-|+.|++.|-|+-+-| -|.++||+|++--+.++..+
T Consensus 40 L~~l~~~~~~~~t~~eia~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~~~~~ 108 (125)
T d1p4xa1 40 LTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERV 108 (125)
T ss_dssp HHHHHSCSCSEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHHHHHHHHHHH
T ss_pred HHHHHHhccCCcCHHHHHHHhCCCcchHHHHHHHHHHCCCceeecccCCCCeEEEEECHHHHHHHHHHH
Confidence 4556444 3688999999999999999999999999999988875 58999999999877665543
No 18
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=93.72 E-value=0.16 Score=37.54 Aligned_cols=65 Identities=12% Similarity=0.178 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHH
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~ 209 (251)
...+.+|-.+.-+...|||..++++.+-+-.-|+.|++.|-|+-.-| -|.++|++|+.-...+.+
T Consensus 37 ~~vL~~l~~~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~~~ 104 (138)
T d1jgsa_ 37 FKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQ 104 (138)
T ss_dssp HHHHHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHHH
T ss_pred HHHHHhHHhCcCCCHHHHHHHHCCCHhHHHHHHHHHhhCCCEEEeeccCCCCeeEEEECHHHHHHHHH
Confidence 34667777788899999999999999999999999999999997766 378899999987665543
No 19
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=93.45 E-value=0.12 Score=37.73 Aligned_cols=65 Identities=14% Similarity=0.304 Sum_probs=53.8
Q ss_pred HHHHHhc--CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHH
Q 025511 148 VEYIKKH--KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 148 I~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~ 212 (251)
+.+|..+ .-+.+.+||..++++.+-+-.-|+.|++.|-|+=.-| .|.++|++||.--+.+.+.+.
T Consensus 39 L~~l~~~~~~~~t~~~la~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~~ 108 (115)
T d2frha1 39 LTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLS 108 (115)
T ss_dssp HHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCHHHHHHHHCCCHhHHHHHHHHHHhhhhheeeecccCCceEEEEECHHHHHHHHHHHH
Confidence 3455444 3578999999999999999999999999999988854 589999999998877776554
No 20
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=93.40 E-value=0.22 Score=36.71 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=56.4
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHHh
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIKR 213 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~q 213 (251)
..+.+|..+.=+.+.|||..++++.+-+-.-|+.|++.|-|.=.-| -|-++|++|++-.+.+......
T Consensus 39 ~iL~~l~~~~~~t~~~la~~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~~G~~~~~~~~~~ 109 (143)
T d1s3ja_ 39 FVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAG 109 (143)
T ss_dssp HHHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHCcCHHHHHHHHHHHHHhhhheeeeecCCCCceEEEECHHHHHHHHHHHHH
Confidence 4566677776679999999999999999999999999999985555 4889999999988776665443
No 21
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=93.27 E-value=0.26 Score=36.71 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=57.2
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~fI~ 212 (251)
..+.+|-.+.=+...+||..++++.+-+-.-|+.|++.|-|+-.-|. |-++|++|+.-...+.....
T Consensus 33 ~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT~~G~~~~~~~~~ 102 (144)
T d1lj9a_ 33 LYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVR 102 (144)
T ss_dssp HHHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHCccHhhHHHHHHHHHhhhcccccCCCCCCCccccccCHHHHHHHHHHHH
Confidence 35667778887899999999999999999999999999999988874 67899999998776665544
No 22
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=93.10 E-value=0.18 Score=36.92 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=51.7
Q ss_pred HHHHHHh-cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC---CCceEEEcHHHHHHHHHHHH
Q 025511 147 FVEYIKK-HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD---RGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 147 FI~YIK~-~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD---RGKFIYIS~EEm~aVA~fI~ 212 (251)
.+.+|.. +.-+...|||..++++.+-+-.-|+.|++.|-|+-+-|. |-++|++|+.-.+.++....
T Consensus 36 ~L~~l~~~~~~~t~~~la~~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~~G~~~~~~~~~ 105 (140)
T d3deua1 36 TLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIAEMEE 105 (140)
T ss_dssp HHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHcCCCccHHHHHHHHCCCHhHHHHHHHHHHhCCCEEecccCCCCCceeeEECHHHHHHHHHHHH
Confidence 4555655 566889999999999999999999999999999877764 77899999998877766543
No 23
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=93.01 E-value=0.21 Score=37.20 Aligned_cols=65 Identities=15% Similarity=0.271 Sum_probs=53.0
Q ss_pred HHHHH--hcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHH
Q 025511 148 VEYIK--KHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 148 I~YIK--~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~ 212 (251)
+.+|. ...-+.+.+||...|++...+-.-|+.|++.|-|+=.-| .|..+|++|+.--+.+.+.+.
T Consensus 39 L~~l~~~~~~~~~~~~ia~~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~v~i~LT~~G~~~~~~l~~ 108 (125)
T d1p4xa2 39 LAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLLA 108 (125)
T ss_dssp HHHHHTTTTCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHccCCCccHHHHHHHHCCCcchHHHHHHHHHhccCEeeeecCCCCCeEEEEECHHHHHHHHHHHH
Confidence 44553 344688999999999999999999999999999986655 489999999988766665554
No 24
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=92.93 E-value=0.16 Score=37.17 Aligned_cols=66 Identities=14% Similarity=0.247 Sum_probs=54.8
Q ss_pred HHHHHHh--cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHH
Q 025511 147 FVEYIKK--HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 147 FI~YIK~--~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~ 212 (251)
++.+|-. ..-+...+||..++++..-+-..|+.|++.|-|.=.-| -|.++|++|+.-.+.+.+.+.
T Consensus 37 vL~~l~~~~~~~~t~~ela~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~~ 107 (115)
T d1hsja1 37 ILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLIS 107 (115)
T ss_dssp HHHHHHTCSCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHHHHHHHH
T ss_pred HHHHHHccCCCCcCHHHHHHHHCCChhhHHHHHHHHHHcCCeEEEeecCCCceEEEEECHHHHHHHHHHHH
Confidence 4556653 45688999999999999999999999999999997775 499999999988777665543
No 25
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=92.69 E-value=0.098 Score=37.55 Aligned_cols=51 Identities=25% Similarity=0.288 Sum_probs=40.1
Q ss_pred HhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHH
Q 025511 152 KKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQA 202 (251)
Q Consensus 152 K~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~E 202 (251)
..+.-+...|||..+|++...+-.-|+.|++.|-|.=.-+ -||+++|++..
T Consensus 32 ~~~~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~~~~~d~rg~~~~~~~~ 85 (109)
T d2d1ha1 32 EIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYYSI 85 (109)
T ss_dssp HHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-------CCEEEEE
T ss_pred HcCCCCCHHHHHHHHCccHhHHHHHHHHHHHCCCEEEeecCCCCCceeEEEeeC
Confidence 4555678999999999999999999999999999976654 47898888753
No 26
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.37 E-value=0.37 Score=35.54 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=52.9
Q ss_pred HHHHHhc-CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceee---eCCCceEEEcHHHHHHHHHHHHhc
Q 025511 148 VEYIKKH-KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVM---DDRGKYIYISQAEMKAVADYIKRQ 214 (251)
Q Consensus 148 I~YIK~~-KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGVi---DDRGKFIYIS~EEm~aVA~fI~qr 214 (251)
+.+|-.+ --+.+.+||..+|++..-+-.-|+.|++.|-|.=.- |-|.++|++|+.-.+.+..+....
T Consensus 40 L~~L~~~~g~~t~~~La~~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT~~G~~~~~~~~~~~ 110 (145)
T d2hr3a1 40 LGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLYGNRAKR 110 (145)
T ss_dssp HHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCeEeeeCccchhHHHhccCHHHHHHHHHHHHHH
Confidence 3455433 368899999999999999999999999999997543 458999999999998887766544
No 27
>d1ldja1 a.4.5.34 (A:687-776) Anaphase promoting complex (APC) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.94 E-value=0.15 Score=37.20 Aligned_cols=56 Identities=25% Similarity=0.341 Sum_probs=47.9
Q ss_pred HHHHHHHHhcCccchHh--------HHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEc
Q 025511 145 ADFVEYIKKHKCIPLED--------LAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYIS 200 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LED--------LAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS 200 (251)
...|...|.+|.+...| |...|..++.++-.+|..|...|-|-=--||++.|+|++
T Consensus 27 AaIVRIMK~~k~l~h~~L~~~v~~~l~~~F~p~~~~iK~~Ie~LIereYi~R~~~~~~~y~YvA 90 (90)
T d1ldja1 27 AAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 90 (90)
T ss_dssp HHHHHHHHHSSEEEHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEECSSSTTEEEECC
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhHHHhcCCCCCceeeeeC
Confidence 44566778888877665 566799999999999999999999988889999999985
No 28
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=91.83 E-value=0.45 Score=34.54 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=53.8
Q ss_pred HHHHHHHhcC-ccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHH
Q 025511 146 DFVEYIKKHK-CIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADY 210 (251)
Q Consensus 146 ~FI~YIK~~K-VV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~f 210 (251)
..+.+|-.+. -+...+||..++++.+-+-.-|..|++.|-|+=.-| -|.+.|++|+.--..+.+.
T Consensus 32 ~iL~~l~~~~~~~t~~~la~~~~~~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~i~lT~~G~~~~~~~ 100 (137)
T d2fbha1 32 LVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADI 100 (137)
T ss_dssp HHHHHHHHCSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHHHH
T ss_pred HHHHHHHHcCCCCcHHHHHHHHCCCHHHHHHHHHHHHHcCCccccCCCCCCCchhhhcCHHHHHHHHHH
Confidence 3456676554 578999999999999999999999999999998877 3899999999876655543
No 29
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=91.50 E-value=0.67 Score=34.09 Aligned_cols=63 Identities=13% Similarity=0.235 Sum_probs=52.8
Q ss_pred HHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHH
Q 025511 147 FVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~ 209 (251)
.+.+|..+.=+...|||..++++.+-+-.-|+.|++.|-|+=.-| -|-++|++|+.-...+.+
T Consensus 41 vL~~l~~~~~~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l~lT~~G~~~~~~ 106 (141)
T d1lnwa_ 41 VLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQH 106 (141)
T ss_dssp HHHHHHSSTTCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSSSEEEEECHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHCccHhHHHHHHHHHHHhhceeeeccCCCCcchhhccCHHHHHHHHH
Confidence 445566677689999999999999999999999999999887766 479999999997765554
No 30
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=91.24 E-value=0.46 Score=36.76 Aligned_cols=72 Identities=11% Similarity=0.107 Sum_probs=59.1
Q ss_pred HHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHHhcCCcc
Q 025511 147 FVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIKRQGRVS 218 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~qrGRVS 218 (251)
.+.+|..+.=+...|||...+++.+-+-.-|+.|++.|-|+-.-| -|-++|++|+.-.+.+.+.......+.
T Consensus 46 vL~~l~~~~~~t~~~la~~~~l~~~tvs~~i~rL~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~~~~~~~ 120 (162)
T d2fxaa1 46 ILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFWSLLEEFDPTR 120 (162)
T ss_dssp HHHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHHHHHHHHCCGGG
T ss_pred HHhhhccCCCcCHHHHHHHHcCCchhhHHHHHHHHHCCCceeecccccCeeeeeccCHhHHHHHHHHHHHHHHHH
Confidence 566777777788999999999999999999999999999997664 489999999999999888877655443
No 31
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=90.30 E-value=0.34 Score=33.27 Aligned_cols=48 Identities=10% Similarity=0.158 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHhcC-ccchHhHHhHcCC-ChHHHHHHHHHHHhcCCccee
Q 025511 142 DLLADFVEYIKKHK-CIPLEDLAAEFKL-RTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 142 ~lL~~FI~YIK~~K-VV~LEDLAa~FgL-rTqdvI~RIq~Lea~G~LTGV 189 (251)
..|.-..+|++.+- -..+.|||.+||+ ++.-|-+.|..|++.|.|+=.
T Consensus 9 ~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r~ 58 (71)
T d1jhfa1 9 EVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIV 58 (71)
T ss_dssp HHHHHHHHHHHHHSSCCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCeecC
Confidence 44555556777655 4679999999999 477788899999999999764
No 32
>d1iuya_ a.4.5.34 (A:) Cullin-3 homologue {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.27 E-value=0.32 Score=35.23 Aligned_cols=59 Identities=25% Similarity=0.308 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHhcCccchHhH--------HhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEc
Q 025511 142 DLLADFVEYIKKHKCIPLEDL--------AAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYIS 200 (251)
Q Consensus 142 ~lL~~FI~YIK~~KVV~LEDL--------Aa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS 200 (251)
..=...|...|.+|.+...|| ...|..++.++-.+|..|...|-|.=--||+..|+|++
T Consensus 26 ~i~AaIVRIMK~~k~l~~~~L~~~v~~~l~~~F~p~~~~iK~~Ie~LIekeYi~R~~~d~~~y~Y~A 92 (92)
T d1iuya_ 26 EIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 92 (92)
T ss_dssp HHHHHHHHHHHHHCEEEHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHTTSEEECSSCSSEEEEC-
T ss_pred HHHHHHHHHHHHhccCcHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhhhhhhcCCCCCCeeeeeC
Confidence 333456677899999887775 56699999999999999999999998889999999985
No 33
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=89.88 E-value=0.32 Score=32.95 Aligned_cols=50 Identities=16% Similarity=0.206 Sum_probs=41.2
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHH
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~ 209 (251)
+.-+|||...|++.+-|-.-+++|..+|.|.- ++|+++-+.++-+.++|+
T Consensus 30 lt~~eLA~~~G~sretvsr~L~~l~~~glI~~---~~~~i~I~d~~~L~~~a~ 79 (81)
T d2gaua1 30 LSREELATLSNMTVSNAIRTLSTFVSERMLAL---DGKRIKIIDCDRLQKTAR 79 (81)
T ss_dssp CCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEE---ETTEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe---cCCEEEEcCHHHHHHHHh
Confidence 45789999999999888888999999998763 667776677888887775
No 34
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=88.60 E-value=0.46 Score=31.98 Aligned_cols=45 Identities=11% Similarity=0.206 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 143 LLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 143 lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
.|............|..-|||..+|++..-|-+-|+.|...|-+.
T Consensus 8 YLk~I~~l~~~~~~v~~~~iA~~L~vs~~SVs~mikrL~~~GlV~ 52 (61)
T d2ev0a1 8 YIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLI 52 (61)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHhcCCCccHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 344444445677889999999999999999999999999999864
No 35
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.49 E-value=0.72 Score=33.04 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=51.0
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCC-CceEEEcHHHHHHHHHHHH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDR-GKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDR-GKFIYIS~EEm~aVA~fI~ 212 (251)
.+..++-.+--....+||...|++...|-.-|+.|++.|-++-..+.. |++.++++.....+-.=++
T Consensus 24 ~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l~~L~~~GlV~r~~~~~~~r~~~~~a~~~~e~l~~~~ 91 (109)
T d1sfxa_ 24 RIYSLLLERGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLKEFK 91 (109)
T ss_dssp HHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHhCCCcchHHHHHHHHHhCCCEEEEeccCCCccccccCCCHHHHHHHHH
Confidence 345566677888899999999999999999999999999999887754 4444455555555444443
No 36
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=87.98 E-value=1.2 Score=31.90 Aligned_cols=61 Identities=16% Similarity=0.262 Sum_probs=47.8
Q ss_pred HHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHH
Q 025511 147 FVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVA 208 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA 208 (251)
.+.++.... ....|||..+|++..-+-.-++.|...|-|+.--+.|-.|-+++++.+..+.
T Consensus 28 Il~~L~~~~-~~v~ela~~l~is~stvS~HL~~L~~aglV~~~r~G~~~~Y~l~~~~i~~l~ 88 (98)
T d1r1ta_ 28 LLSLLARSE-LCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALY 88 (98)
T ss_dssp HHHHHTTCC-BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSHHHHHHH
T ss_pred HHHHHHcCC-cCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEEECCEEEEEEChHHHHHHH
Confidence 455665555 5688999999999999999999999999999877666666667787665543
No 37
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=87.82 E-value=0.3 Score=33.38 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=41.6
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHH
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVA 208 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA 208 (251)
.-+|||...|++.+-+-.-++.|..+|.|. ++.||+++...++-|.+.|
T Consensus 32 t~~eiA~~lG~sretvsr~l~~l~~~g~I~--~~~~~~i~I~d~~~L~~~A 80 (80)
T d1ft9a1 32 TVEEIANLIGSSRQTTSTALNSLIKEGYIS--RQGRGHYTIPNLVRLKAAA 80 (80)
T ss_dssp CHHHHHHHHCSCHHHHHHHHHHHHHTTSSE--ECSTTCEECSSHHHHHHTC
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCEE--ECCCCeEEECCHHHHHhhC
Confidence 467999999999999999999999998774 4568999999988887764
No 38
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=87.37 E-value=0.9 Score=31.00 Aligned_cols=53 Identities=25% Similarity=0.435 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcC------ccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceE
Q 025511 144 LADFVEYIKKHK------CIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYI 197 (251)
Q Consensus 144 L~~FI~YIK~~K------VV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFI 197 (251)
.....++|.... +-...+||..||++..-+.+-++.|.++|.|.-. --+|-||
T Consensus 4 ~~~i~~~I~~g~l~~G~~LPse~~La~~~~vSr~tvr~Al~~L~~~Gli~~~-~g~G~~V 62 (78)
T d3bwga1 4 ATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQV-RGSGIFV 62 (78)
T ss_dssp HHHHHHHHHHTTCCTTCBCCCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE-TTTEEEE
T ss_pred HHHHHHHHHcCCCCCcCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE-cCcEEEE
Confidence 345566666544 3367899999999999999999999999998744 3345444
No 39
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.15 E-value=1.2 Score=30.32 Aligned_cols=55 Identities=15% Similarity=0.310 Sum_probs=45.0
Q ss_pred HHHHHHHh-cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHH
Q 025511 146 DFVEYIKK-HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAE 203 (251)
Q Consensus 146 ~FI~YIK~-~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EE 203 (251)
+.++++.. ..-+.+.|||.+.|++..-+-.-++.|++.|-+.= |++|+| .+++.=
T Consensus 9 ~IL~~~a~~~~~~s~~eia~~~~~~~st~~rll~tL~~~g~l~~--~~~g~y-~lG~~l 64 (75)
T d1mkma1 9 EILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLR--KKDKRY-VPGYKL 64 (75)
T ss_dssp HHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE--CTTSCE-EECTHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE--CCCCCE-eecHHH
Confidence 35666655 46899999999999999999999999999999984 567885 466543
No 40
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=85.21 E-value=1.3 Score=32.22 Aligned_cols=52 Identities=17% Similarity=0.300 Sum_probs=43.9
Q ss_pred hcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceee---eCCCceEEEcHHHH
Q 025511 153 KHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVM---DDRGKYIYISQAEM 204 (251)
Q Consensus 153 ~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGVi---DDRGKFIYIS~EEm 204 (251)
..+-+.+.|||...|++.+.+-.-|+.|+..|.+.=+- |.|..|+++|+.+.
T Consensus 38 ~~~plt~~ela~~l~vsk~~vs~~l~~L~~~GlV~r~~~~~drr~~~~~~t~~g~ 92 (151)
T d1ku9a_ 38 SDKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNYYEAVDGFSS 92 (151)
T ss_dssp CSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEEEECCHHHH
T ss_pred CCCCcCHHHHHHHhCCCcchHHHHHHHHHHCCCEEEEEcCCCCceeEEeCCHHHH
Confidence 44558999999999999999999999999999997554 45778888988653
No 41
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=84.50 E-value=0.86 Score=30.41 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=39.3
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
...+.+|..+.-+.-.|||..+||+..-|-..|..|++.|-|.
T Consensus 9 ~~Il~~l~~~g~~sr~eLa~~~glS~~Tv~~~l~~L~~~Glv~ 51 (71)
T d1z05a1 9 GRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIH 51 (71)
T ss_dssp HHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHcCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 3567788999999999999999999999999999999999885
No 42
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=83.63 E-value=0.67 Score=31.20 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=33.7
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceE
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYI 197 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFI 197 (251)
+..+||..||++..-+.+-++.|+++|-|+-. --+|-||
T Consensus 27 ~~~~La~~~~vSr~tvr~Al~~L~~~Gli~~~-~~~G~~V 65 (69)
T d2hs5a1 27 SEPDICAALDVSRNTVREAFQILIEDRLVAHE-LNRGVFV 65 (69)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-TTTEEEE
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE-cCCEEEe
Confidence 67899999999999999999999999998865 3456655
No 43
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.40 E-value=1.3 Score=29.99 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 143 LLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 143 lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
.|...-.....+..|..-|||..+|++..-|-.-|+.|.+.|-|+
T Consensus 10 YL~~I~~L~~~~~~v~~~~iA~~L~vs~~SVt~mvkrL~~~Glv~ 54 (63)
T d2isya1 10 YLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLR 54 (63)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 344444444667889999999999999999999999999999875
No 44
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=81.02 E-value=1.1 Score=32.53 Aligned_cols=50 Identities=10% Similarity=0.095 Sum_probs=38.7
Q ss_pred chHhHHhHcCCChHHHH-HHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHH
Q 025511 158 PLEDLAAEFKLRTQECI-NRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADY 210 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI-~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~f 210 (251)
.-+|||...|++|-++| .-|++|..+|.|+- .+|+++-+.++-+.+.|.-
T Consensus 33 TqeeLA~~lG~s~ReTVsR~L~~L~~~GlI~~---~~~~i~I~D~~~L~~~A~~ 83 (100)
T d2bgca1 33 TMQELGYSSGIAHSSAVSRIISKLKQEKVIVY---KNSCFYVQNLDYLKRYAPK 83 (100)
T ss_dssp CHHHHHHHTTCCCHHHHHHHHHHHHHTTSEEE---ETTEEEESCHHHHHHHCHH
T ss_pred CHHHHHHHhCCchHHHHHHHHHHHHHCCCEEE---cCCEEEEeCHHHHHHHhcc
Confidence 45999999999876666 56899999998773 4666666688888887753
No 45
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=80.21 E-value=4 Score=29.47 Aligned_cols=62 Identities=6% Similarity=0.081 Sum_probs=46.4
Q ss_pred HHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHH
Q 025511 148 VEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 148 I~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~ 209 (251)
+.++-...=..+.+||..+|++..-+-.-++.|...|-|+.--+.|-.|-+|.++.+..+-+
T Consensus 37 l~~L~~~~~~~v~ela~~l~~s~s~vS~HL~~L~~aGlv~~~r~G~~~~Y~l~~~~i~~ll~ 98 (108)
T d1u2wa1 37 TYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMM 98 (108)
T ss_dssp HHHHHHSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC----CCEEEESCHHHHHHHH
T ss_pred HHHHHhCCCccHHHHHHHHccChhHHHHHHHHHHHCCeeEEEEECCEEEEEECHHHHHHHHH
Confidence 34455556678899999999999888889999999999988766666666677887766544
No 46
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=78.90 E-value=6 Score=27.87 Aligned_cols=61 Identities=5% Similarity=0.171 Sum_probs=46.0
Q ss_pred HHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHH
Q 025511 147 FVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVA 208 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA 208 (251)
.+.++.... ..+.|||..+|++..-+-.-++.|...|-|+.--+-|=.|-+|+++.+..+-
T Consensus 23 Il~~L~~~~-~~v~el~~~l~~s~~~vS~HL~~L~~~glv~~~r~G~~~~Y~l~~~~v~~ll 83 (94)
T d1r1ua_ 23 IMELLSVSE-ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATML 83 (94)
T ss_dssp HHHHHHHCC-BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSHHHHHHH
T ss_pred HHHHHHcCC-ccHHHHHHHHCCCHHHHHHHHHHHHHCCceEEEEECCEEEEEECcHHHHHHH
Confidence 456666655 5579999999999888888999999999998765544444556777766553
No 47
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=78.74 E-value=1 Score=30.46 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=34.9
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHH
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVA 208 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA 208 (251)
+.-+|||...|++.+-|-.-+++|..+|.|. -++|+++-...+-+..++
T Consensus 31 lt~~elA~~~g~sretvsr~l~~l~~~glI~---~~~~~i~I~d~~~L~~~~ 79 (80)
T d3e5ua1 31 LSQKSIGEITGVHHVTVSRVLASLKRENILD---KKKNKIIVYNLGELKHLS 79 (80)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE---C----CEESCHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCcEE---ecCCEEEEcCHHHHHHHh
Confidence 3458999999999999999999999999765 155555544666665554
No 48
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=77.69 E-value=1.3 Score=29.38 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=32.2
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEE
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYI 199 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYI 199 (251)
+.-+|||...|++.+-|-.-+++|+++|.|. -+|+-|+|
T Consensus 30 lt~~~lA~~~G~sRetvsr~L~~l~~~glI~----~~~~~I~I 68 (69)
T d1i5za1 30 ITRQEIGQIVGCSRETVGRILKMLEDQNLIS----AHGKTIVV 68 (69)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE----EETTEEEE
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE----EcCCEEEE
Confidence 4678999999999999999999999998664 45666665
No 49
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=77.06 E-value=3.1 Score=32.14 Aligned_cols=55 Identities=15% Similarity=0.307 Sum_probs=43.2
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCc-----eEEEcH
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGK-----YIYISQ 201 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGK-----FIYIS~ 201 (251)
+.+.+++. .=....+||..+|++++-+-.-++.|++.|-|+...+..|+ |-++|+
T Consensus 19 ~Il~~L~~-~~~~~~ela~~l~~s~~~v~~HL~~L~~~Glv~~~~~~~~~G~~~~~y~l~~ 78 (194)
T d2p4wa1 19 RILFLLTK-RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKK 78 (194)
T ss_dssp HHHHHHHH-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECT
T ss_pred HHHHHHHh-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeecCCCCceEEEEecc
Confidence 34566654 45677899999999999999999999999999987776553 555554
No 50
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=76.96 E-value=0.74 Score=35.30 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=46.9
Q ss_pred ccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEEcHHHHHHHHHHHH
Q 025511 156 CIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYISQAEMKAVADYIK 212 (251)
Q Consensus 156 VV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYIS~EEm~aVA~fI~ 212 (251)
-+...+||..+++...-+-.-|+.|++.|-|+-.-| -|.++|++|+.-.+.+.....
T Consensus 79 ~lt~~eLa~~l~i~~~tvsr~l~~Le~~GlV~r~~~~~DrR~~~i~LT~~G~~l~~~~~~ 138 (172)
T d2fbka1 79 GLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVTHLLP 138 (172)
T ss_dssp CBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHhHHHHHHHHHHhCCCeeeeccccchhhHHhhcCHHHHHHHHHHHH
Confidence 477899999999999999999999999999998875 389999999998877776543
No 51
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.58 E-value=2.6 Score=29.13 Aligned_cols=49 Identities=18% Similarity=0.339 Sum_probs=40.9
Q ss_pred HHHHHHHHhcC---ccchHhHHhHc-CCChHHHHHHHHHHHhcCCcceeeeCC
Q 025511 145 ADFVEYIKKHK---CIPLEDLAAEF-KLRTQECINRITSLENMGRLSGVMDDR 193 (251)
Q Consensus 145 ~~FI~YIK~~K---VV~LEDLAa~F-gLrTqdvI~RIq~Lea~G~LTGViDDR 193 (251)
....++|+... =+.+.+|++.| |++..++-+-|..|..+|-|--=+||.
T Consensus 9 ~~V~~~i~s~~~~eGi~~~el~~~l~~~~~~~i~~aid~L~~eG~IYsTiDdd 61 (69)
T d1dpua_ 9 NQVLNLIKACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDD 61 (69)
T ss_dssp HHHHHHHHHCCCTTTEEHHHHHHHSTTSCHHHHHHHHHHHHHTTSEEECSSTT
T ss_pred HHHHHHHHhCCCccCcCHHHHHHHccCCCHHHHHHHHHHHHhCCceecccccc
Confidence 35667777655 37788999999 899999999999999999998877763
No 52
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=74.61 E-value=3.7 Score=29.19 Aligned_cols=54 Identities=20% Similarity=0.298 Sum_probs=43.6
Q ss_pred hhHHHHHHH-HHHhcCccchHhHHhHcCC--ChHHHHHHHHHHHhcCCcceeeeCCC
Q 025511 141 RDLLADFVE-YIKKHKCIPLEDLAAEFKL--RTQECINRITSLENMGRLSGVMDDRG 194 (251)
Q Consensus 141 q~lL~~FI~-YIK~~KVV~LEDLAa~FgL--rTqdvI~RIq~Lea~G~LTGViDDRG 194 (251)
+..|...|+ ||....=|-..+||..+|+ ++.-+-|-++.|++.|-|..----+|
T Consensus 7 ~~IL~~Ive~y~~~g~Pv~s~~i~~~~~l~~S~aTIRn~m~~LE~~G~l~~~h~s~G 63 (87)
T d1stza1 7 RKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAG 63 (87)
T ss_dssp HHHHHHHHHHHHHHCSCBCHHHHHHHSCCCSCHHHHHHHHHHHHHTTSEECCSSCSC
T ss_pred HHHHHHHHHHHHHcCCccCHHHHHHHhCCCCCHHHHHHHHHHHHHCCcccCCCCCCC
Confidence 455677776 8999999999999999887 58888889999999999876333455
No 53
>d2hyec1 a.4.5.34 (C:676-759) Cullin-4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.56 E-value=3.1 Score=29.46 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCccchHhHH------hHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEc
Q 025511 145 ADFVEYIKKHKCIPLEDLA------AEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYIS 200 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLA------a~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS 200 (251)
...|.-.|.+|.....||- ..|..++.++-.+|..|...+=|-=--||++.|+|++
T Consensus 23 AaIVRIMK~~k~l~h~eL~~~v~~~l~f~~~~~~iK~~Ie~LIereYi~R~~~~~~~y~Y~A 84 (84)
T d2hyec1 23 AAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 84 (84)
T ss_dssp HHHHHHHHHSSEEETHHHHHHHHHHSSSCCCHHHHHHHHHHHHHTTSCBCCSSCTTEEECCC
T ss_pred HHHHHHHHHcccCcHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhhhHhhcCCCCCceeeeeC
Confidence 3455667888888777753 2599999999999999999999988888999999985
No 54
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=71.82 E-value=2.1 Score=29.02 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=32.3
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEc
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYIS 200 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS 200 (251)
+.-+|||...|++.+-+-.-++.|.+.|.|.. .+|+ |.|.
T Consensus 28 lt~~elA~~lg~sr~tvsr~l~~l~~~g~I~~---~~~~-i~I~ 67 (73)
T d1zyba1 28 VKMDDLARCLDDTRLNISKTLNELQDNGLIEL---HRKE-ILIP 67 (73)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHHHHHTTSCEE---ETTE-EEES
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe---cCCE-EEEc
Confidence 35689999999999998889999999999873 4555 4443
No 55
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=70.70 E-value=8.2 Score=27.04 Aligned_cols=64 Identities=13% Similarity=0.202 Sum_probs=50.5
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHH--HHHHhcCCccHHHHHhhc
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVA--DYIKRQGRVSISHLASKS 226 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA--~fI~qrGRVSisELa~~s 226 (251)
.+.|+|..+|+++ +-|.--+..|-|..+-.+.|.|=|-|++.+..+. ...+.-| +|++++.+.-
T Consensus 4 tI~e~A~~~gvs~----~tlR~Ye~~GLl~p~~r~~~gyR~Y~~~~~~~l~~I~~lr~~G-~sl~eI~~~l 69 (109)
T d1r8da_ 4 QVKQVAEISGVSI----RTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIG-FRLDEIKEML 69 (109)
T ss_dssp CHHHHHHHHSCCH----HHHHHHHHTTSSCCSEECTTCCEEBCHHHHHHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred cHHHHHHHHCcCH----HHHHHHHHcCCcCCcccCCcccccccHHHHHHHHHHHHHHHcC-CCHHHHHHHH
Confidence 4679999999975 4477888999999988888889999999999663 3445556 8988877653
No 56
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=70.68 E-value=2.2 Score=28.53 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHhc--CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCC
Q 025511 141 RDLLADFVEYIKKH--KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDR 193 (251)
Q Consensus 141 q~lL~~FI~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDR 193 (251)
+.+.+......... .--.+-|||..+|+...++.+-++.|...|.|+=|-+|+
T Consensus 6 ~~l~~~I~~~~~~~g~~PP~vrdl~~~l~~~e~~~~~lL~~l~~~G~lvkI~~d~ 60 (64)
T d1lvaa3 6 KKLLKDLEDKYRVSRWQPPSFKEVAGSFNLDPSELEELLHYLVREGVLVKINDEF 60 (64)
T ss_dssp HHHHHHHHHHHHHHTTSCCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEESSSSB
T ss_pred HHHHHHHHHHHHHcCCCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecccc
Confidence 34555666655555 345689999999999999999999999999999998885
No 57
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=69.96 E-value=4 Score=27.47 Aligned_cols=50 Identities=20% Similarity=0.247 Sum_probs=39.4
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHH
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~ 209 (251)
+.-+|||...|++.+-+-.-++.|.++|.|. + ++|+++-+.++-+..+|+
T Consensus 30 lt~~elA~~lg~sr~tv~r~L~~l~~~gli~-~--~~~~i~I~d~~~L~~~a~ 79 (82)
T d2zcwa1 30 ATHDELAAAVGSVRETVTKVIGELAREGYIR-S--GYGKIQLLDLKGLKELAE 79 (82)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE-E--ETTEEEESCHHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE-e--cCCEEEEcCHHHHHHHHH
Confidence 5678999999999998888999999999886 2 456655455777777763
No 58
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=68.18 E-value=4.5 Score=26.88 Aligned_cols=43 Identities=9% Similarity=0.045 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
...+++|..+.-+.-.|||...||+..-+=+-+.+|.+.|.|.
T Consensus 8 ~~Il~~i~~~g~~sr~eLa~~~gLS~~Tvs~iv~~L~~~glv~ 50 (70)
T d1z6ra1 8 GAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQ 50 (70)
T ss_dssp HHHHHHHHSSCSCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 4578899999999999999999999999999999999999885
No 59
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=62.67 E-value=5.5 Score=24.79 Aligned_cols=38 Identities=13% Similarity=0.293 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHhc--CccchHhHHhHcCCChHHHHHHHHH
Q 025511 142 DLLADFVEYIKKH--KCIPLEDLAAEFKLRTQECINRITS 179 (251)
Q Consensus 142 ~lL~~FI~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~ 179 (251)
+++...++||.++ +-+.|+|||..+|++..-.-...+.
T Consensus 3 ~ii~~i~~yi~~~~~~~itl~~lA~~~~~S~~~l~r~Fk~ 42 (54)
T d1d5ya1 3 GIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD 42 (54)
T ss_dssp HHHHHHHHHHHTTSSSSCCCHHHHTTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 5688899999765 5699999999999998877665554
No 60
>d1aoya_ a.4.5.3 (A:) Arginine repressor (ArgR), N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=60.75 E-value=10 Score=26.52 Aligned_cols=60 Identities=18% Similarity=0.282 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhcCccchHhHH----hHcCCC-hHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHH
Q 025511 141 RDLLADFVEYIKKHKCIPLEDLA----AEFKLR-TQECINRITSLENMGRLSGVMDDRGKYIYISQAE 203 (251)
Q Consensus 141 q~lL~~FI~YIK~~KVV~LEDLA----a~FgLr-TqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EE 203 (251)
+.+|..+-.-|+.+.|-.=+||. .++.-+ ||-+|+| +|.+.|.+- |-+..|+++|.-|.|
T Consensus 8 ~~~l~~I~~li~~~~i~tQ~eL~~~L~~~G~~~vTQaTiSR--DL~eLg~vK-v~~~~g~~~Y~lp~e 72 (78)
T d1aoya_ 8 EELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSR--MLTKFGAVR-TRNAKMEMVYCLPAE 72 (78)
T ss_dssp TTHHHHHHHHHHTCCCCSHHHHHHHHHHHTCSSCCHHHHHH--HHHHHTCEE-EECTTSCEEEECCSS
T ss_pred HHHHHHHHHHHHhCCcCCHHHHHHHHHHcCCcchhHHHHHH--HHHHhCCEE-eeCCCCCEEEEeCCC
Confidence 34556666789999998777654 443334 9999998 566666554 889999999987765
No 61
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.59 E-value=8.8 Score=25.86 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=30.6
Q ss_pred CccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 155 KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 155 KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
|+=...+||..||++..-|..-++.|.++|.|.-.
T Consensus 26 ~LPs~~eLa~~~~vSr~tvr~Al~~L~~~G~i~~~ 60 (74)
T d1hw1a1 26 ILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 60 (74)
T ss_dssp BCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE
Confidence 34357889999999999999999999999988754
No 62
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=56.35 E-value=8 Score=27.09 Aligned_cols=51 Identities=12% Similarity=0.108 Sum_probs=44.8
Q ss_pred CchhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 139 GDRDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 139 ~sq~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
+..+++..+++.+...+-+.--+||..+|+.-.+|=.-+=+|+..|.+..+
T Consensus 7 ~i~~lvk~~l~~L~~~~~~tA~~LAk~Lg~~Kk~VNr~LY~L~~~G~v~~~ 57 (70)
T d1sfua_ 7 EIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMV 57 (70)
T ss_dssp HHHHHHHHHHHTSCTTCEECHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHhCCCHHHHHHHHHHHHHCCCeecC
Confidence 357889999999999999999999999999887777778999999998654
No 63
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=51.84 E-value=3.1 Score=27.51 Aligned_cols=15 Identities=27% Similarity=0.541 Sum_probs=14.1
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+||.||.+
T Consensus 66 lsdeei~~la~Yi~S 80 (82)
T d1cora_ 66 VTEEEAKILAEWILS 80 (82)
T ss_dssp CCHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999999975
No 64
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=51.13 E-value=3.5 Score=26.81 Aligned_cols=15 Identities=53% Similarity=0.837 Sum_probs=14.0
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+|+.||+.
T Consensus 64 Lsd~ei~~l~aYi~s 78 (79)
T d1c53a_ 64 YSDEEMKAMADYMSK 78 (79)
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999999975
No 65
>d1h1oa1 a.3.1.4 (A:12-93) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=50.82 E-value=3.8 Score=26.99 Aligned_cols=16 Identities=38% Similarity=0.681 Sum_probs=14.7
Q ss_pred EcHHHHHHHHHHHHhc
Q 025511 199 ISQAEMKAVADYIKRQ 214 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr 214 (251)
+|++|+.+||.||+..
T Consensus 60 LSd~eI~~la~Yi~sl 75 (82)
T d1h1oa1 60 LDSAKITALADYFNAQ 75 (82)
T ss_dssp CCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8999999999999864
No 66
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=50.07 E-value=15 Score=22.51 Aligned_cols=40 Identities=8% Similarity=0.108 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhc--CccchHhHHhHcCCChHHHHHHHHHHH
Q 025511 142 DLLADFVEYIKKH--KCIPLEDLAAEFKLRTQECINRITSLE 181 (251)
Q Consensus 142 ~lL~~FI~YIK~~--KVV~LEDLAa~FgLrTqdvI~RIq~Le 181 (251)
..+...++||..+ .=+.|+|||..+|+++.-+....+..-
T Consensus 3 ~~i~~v~~yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk~~~ 44 (54)
T d1bl0a1 3 ITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKET 44 (54)
T ss_dssp HHHHHHHHHHHTTTTSCCCCHHHHHHSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 3578889999754 458899999999999998888777654
No 67
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI {Escherichia coli [TaxId: 562]}
Probab=48.60 E-value=15 Score=25.81 Aligned_cols=43 Identities=14% Similarity=0.295 Sum_probs=38.2
Q ss_pred HHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcce
Q 025511 146 DFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSG 188 (251)
Q Consensus 146 ~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTG 188 (251)
+.+.|+-.+...--.++|-+||++.=.+.-.+.-|+++|.|--
T Consensus 4 ~Il~fl~~~~~~~T~EIAea~gvsaYQARyYL~~Lekegki~R 46 (73)
T d2htja1 4 EILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQR 46 (73)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHhcCCccHHHHHHHhhhHHHHHHHHHHHHHHhcCccc
Confidence 4667788888889999999999999999999999999998853
No 68
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId: 274]}
Probab=48.08 E-value=6.8 Score=28.01 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=20.6
Q ss_pred EcHHHHHHHHHHHHhc-C---------CccHHHHHhh
Q 025511 199 ISQAEMKAVADYIKRQ-G---------RVSISHLASK 225 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr-G---------RVSisELa~~ 225 (251)
+|++|+.+|+.||+.. | -||-.++++.
T Consensus 75 LsD~eI~av~~YIr~~~gn~~~~~~~~~~t~~~v~~~ 111 (131)
T d1c52a_ 75 LKDEEIAAVLNHIATAWGDAKKVKGFKPFTAEEVKKL 111 (131)
T ss_dssp SCHHHHHHHHHHHHHTTSTGGGSTTCCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 7999999999999864 2 3565666553
No 69
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=47.20 E-value=25 Score=24.60 Aligned_cols=65 Identities=8% Similarity=0.235 Sum_probs=49.2
Q ss_pred cchHhHHhHcCCChHHHHHHHHHHHhcCCcce-eeeCCCceEEEcHHHHHHHH--HHHHhcCCccHHHHHhhc
Q 025511 157 IPLEDLAAEFKLRTQECINRITSLENMGRLSG-VMDDRGKYIYISQAEMKAVA--DYIKRQGRVSISHLASKS 226 (251)
Q Consensus 157 V~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTG-ViDDRGKFIYIS~EEm~aVA--~fI~qrGRVSisELa~~s 226 (251)
-.+.++|..+|+++. -|.--+..|-|.+ ..+..|.|=|-|++.+..+. .+.+.-| +|+.++....
T Consensus 4 ytI~evA~~~gvs~~----tlR~Ye~~GLl~P~~~r~~~gyR~Y~~~~l~~l~~I~~lr~~g-~sl~eIk~~l 71 (118)
T d1r8ea1 4 YSIGEVSKLANVSIK----ALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIG-TPLEEMKKAQ 71 (118)
T ss_dssp EEHHHHHHHHTCCHH----HHHHHHHTTSSCCSEECTTTCCEEEETGGGGHHHHHHHHHHTT-CCHHHHHHHT
T ss_pred ccHHHHHHHHCcCHH----HHHHHHHcCCcccccccCCCCcccccHHHHHHHHHHHHHHHcC-CCHHHHHHHH
Confidence 357899999999764 4677788999985 66777778888999887764 3445556 8988876654
No 70
>d1zara1 a.4.5.56 (A:2-90) Rio2 serine protein kinase N-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=46.29 E-value=8.9 Score=27.67 Aligned_cols=55 Identities=9% Similarity=0.213 Sum_probs=43.7
Q ss_pred HHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCce--EEEcHHHHHHHH
Q 025511 151 IKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKY--IYISQAEMKAVA 208 (251)
Q Consensus 151 IK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKF--IYIS~EEm~aVA 208 (251)
.|.+-+||++.+++.-||+...|-.+|..|...+.|.- +..+| --+|-.-++.+|
T Consensus 24 mrnhE~VP~~lI~~~a~l~~~~~~~~L~~L~k~kLv~~---~~~~Y~GYrLT~~GYD~LA 80 (89)
T d1zara1 24 LWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQN---RQKDYEGSTFTFIGLSLYS 80 (89)
T ss_dssp TTTCSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE---ECSSSCEEEECHHHHHHHH
T ss_pred cccCccccHHHHHHHHCCCHHHHHHHHHHHHHcCCeec---cCCCcceEEeeccChHHHH
Confidence 47899999999999999999999999999999998843 22222 136666666665
No 71
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=46.17 E-value=21 Score=24.39 Aligned_cols=49 Identities=12% Similarity=0.288 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 141 RDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 141 q~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
+.+..+-+++|...+-....-|=.+|++--.-+-.-|..|++.|-++.-
T Consensus 3 D~ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~GiVsp~ 51 (67)
T d2ve8a1 3 DPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTPM 51 (67)
T ss_dssp CTTHHHHHHHHHHHCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSBCCC
T ss_pred cHHHHHHHHHHHHhCcccHHHHHHHHhcchHHHHHHHHHHHHCcCCCCC
Confidence 4567888999999999999999999999999999999999999988763
No 72
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=45.68 E-value=12 Score=28.11 Aligned_cols=54 Identities=15% Similarity=0.229 Sum_probs=42.1
Q ss_pred HHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCC--C---ceEEEcH
Q 025511 147 FVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDR--G---KYIYISQ 201 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDR--G---KFIYIS~ 201 (251)
.++.+. ..=....+||..+|++.+-+-.-|+.|+..|-|.-+-..+ | ||-.+|.
T Consensus 24 Il~~L~-~~~~s~~ela~~lg~s~~~v~~hl~~L~~~glv~~~~~~~~~g~~~k~y~~~~ 82 (190)
T d1ulya_ 24 ILKLLR-NKEMTISQLSEILGKTPQTIYHHIEKLKEAGLVEVKRTEMKGNLVEKYYGRTA 82 (190)
T ss_dssp HHHHHT-TCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEESS
T ss_pred HHHHHH-hCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeeccCCcceEEEEEcc
Confidence 455664 4457899999999999999999999999999997765543 2 5666663
No 73
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=45.63 E-value=4.8 Score=26.63 Aligned_cols=15 Identities=20% Similarity=0.457 Sum_probs=14.1
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+||.||..
T Consensus 66 lsd~ei~~la~Yi~S 80 (82)
T d351ca_ 66 VSDDEAQTLAKWVLS 80 (82)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999999975
No 74
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=44.86 E-value=2.7 Score=29.96 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhc------CccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCce
Q 025511 143 LLADFVEYIKKH------KCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKY 196 (251)
Q Consensus 143 lL~~FI~YIK~~------KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKF 196 (251)
..+.+.+.|... |+=..-+||.+||++..-|..-++.|+.+|-|... --+|-|
T Consensus 14 i~~~i~~~I~~g~l~~G~~LPs~r~La~~~~vSr~tvr~Al~~L~~~Gli~~~-~g~G~~ 72 (100)
T d1v4ra1 14 VATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSR-GALGTV 72 (100)
T ss_dssp HHHHHHHHTTTTSCCTTSBCCCHHHHHHHSSSCTTHHHHHTTTTTTSSCCEEE-TTTEEE
T ss_pred HHHHHHHHHHcCCCCCcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEe-cCCEEE
Confidence 344455555443 44468899999999999999999999999998754 334544
No 75
>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}
Probab=43.75 E-value=5.3 Score=26.41 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=14.4
Q ss_pred EEcHHHHHHHHHHHHh
Q 025511 198 YISQAEMKAVADYIKR 213 (251)
Q Consensus 198 YIS~EEm~aVA~fI~q 213 (251)
-+|++|+.+|+.||..
T Consensus 63 ~lsd~ei~~l~~yi~s 78 (80)
T d1ynra1 63 NVTDAEAKQLAQWILS 78 (80)
T ss_dssp SCCHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3899999999999974
No 76
>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Green alga (Cladophora glomerata) [TaxId: 162068]}
Probab=43.63 E-value=5 Score=26.54 Aligned_cols=25 Identities=24% Similarity=0.521 Sum_probs=18.7
Q ss_pred eeeeCCCceEEEcHHHHHHHHHHHHhc
Q 025511 188 GVMDDRGKYIYISQAEMKAVADYIKRQ 214 (251)
Q Consensus 188 GViDDRGKFIYIS~EEm~aVA~fI~qr 214 (251)
|+|=.-|. .+|++|+.+|+.||.+.
T Consensus 61 ~~MP~~~~--~Lsdeei~~l~aYi~~~ 85 (91)
T d1ls9a_ 61 GAMPAWAD--RLDEDDIEAVSNYVYDQ 85 (91)
T ss_dssp TTBCCCTT--TSCHHHHHHHHHHHHHH
T ss_pred CCCccccc--CCCHHHHHHHHHHHHHH
Confidence 44554443 28999999999999764
No 77
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=43.29 E-value=4.7 Score=26.77 Aligned_cols=25 Identities=28% Similarity=0.444 Sum_probs=18.6
Q ss_pred eeeeCCCceEEEcHHHHHHHHHHHHhc
Q 025511 188 GVMDDRGKYIYISQAEMKAVADYIKRQ 214 (251)
Q Consensus 188 GViDDRGKFIYIS~EEm~aVA~fI~qr 214 (251)
|.|-.-|. -+|++|+.+|+.||.+.
T Consensus 59 ~~Mp~~~~--~Lsd~ei~~v~~Yi~~~ 83 (89)
T d1ctja_ 59 GAMPAWDG--RLDEDEIAGVAAYVYDQ 83 (89)
T ss_dssp TTBCCCBT--TBCHHHHHHHHHHHHHH
T ss_pred CCCCccCC--CCCHHHHHHHHHHHHHH
Confidence 34554333 27999999999999875
No 78
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.10 E-value=30 Score=29.33 Aligned_cols=63 Identities=13% Similarity=0.252 Sum_probs=43.3
Q ss_pred HHHh-cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHHHHhcCCcc
Q 025511 150 YIKK-HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADYIKRQGRVS 218 (251)
Q Consensus 150 YIK~-~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~fI~qrGRVS 218 (251)
++.. ++-+.++|||..-|++.+|+|..++.| |.| +.+..+-.|.++++-++...+- ..+.|+.
T Consensus 199 ~l~~~~~~isi~~is~~T~i~~~Dii~tL~~l---~~l--~~~~g~~~i~~~~~~~~~~~~~-~~k~~~~ 262 (273)
T d1fy7a_ 199 LLVEHQKEITIDEISSMTSMTTTDILHTAKTL---NIL--RYYKGQHIIFLNEDILDRYNRL-KAKKRRT 262 (273)
T ss_dssp HHHHTCSEEEHHHHHHHHCBCHHHHHHHHHHH---TCE--EEETTEEEEECCHHHHHHHHHH-HHTCCCC
T ss_pred HHHhCCCCccHHHHHHhcCCCHHHHHHHHHHC---CCE--EEECCeEEEEeCHHHHHHHHHH-hcCCCce
Confidence 3443 456899999999999999998876655 555 3455556677888777776653 3334443
No 79
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=42.93 E-value=5.3 Score=26.18 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=14.2
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+|+.||.+
T Consensus 68 Lsd~ei~~v~aYi~~ 82 (88)
T d1f1fa_ 68 LSPLQIEDVAAYVVD 82 (88)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 899999999999985
No 80
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=40.67 E-value=26 Score=24.04 Aligned_cols=49 Identities=14% Similarity=0.306 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcce
Q 025511 140 DRDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSG 188 (251)
Q Consensus 140 sq~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTG 188 (251)
.+.+..+-+.++...+-+...=|-++|++--.-+-.-|..|++.|-++.
T Consensus 5 ~D~ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~GiVsp 53 (69)
T d2j5pa1 5 LDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSE 53 (69)
T ss_dssp SCTTHHHHHHHHHHTTEEEHHHHHHHHTCCHHHHHHHHHHHHHHTSBCC
T ss_pred ccHHHHHHHHHHHHhCcccHHHHHHHHhccchHHHHHHHHHHHCCcCCC
Confidence 4568889999999999999999999999999999999999999998875
No 81
>d1c75a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Bacillus pasteurii [TaxId: 1474]}
Probab=39.44 E-value=6.7 Score=25.80 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=14.9
Q ss_pred EEcHHHHHHHHHHHHhc
Q 025511 198 YISQAEMKAVADYIKRQ 214 (251)
Q Consensus 198 YIS~EEm~aVA~fI~qr 214 (251)
-+|++|+.+|+.||.+.
T Consensus 54 ~Ls~~ei~~i~~Yl~~~ 70 (71)
T d1c75a_ 54 IAKGAEAEAVAAWLAEK 70 (71)
T ss_dssp SSCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 39999999999999753
No 82
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=38.36 E-value=27 Score=23.73 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHHHHhcCCccHHHHH
Q 025511 144 LADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADYIKRQGRVSISHLA 223 (251)
Q Consensus 144 L~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~fI~qrGRVSisELa 223 (251)
|-..|..+. |=..+++||..-|+ +...|++|. +|+.-..|.+=+.++|+.+. |++++|.
T Consensus 15 lG~~ir~~R--~~~t~~eLA~~~Gv-s~~~ls~iE--------------~G~~~~ps~~tl~kia~~L~----v~~~~Ll 73 (82)
T d2ofya1 15 LGELLRSAR--GDMSMVTVAFDAGI-SVETLRKIE--------------TGRIATPAFFTIAAVARVLD----LSLDDVA 73 (82)
T ss_dssp HHHHHHHHH--TTSCHHHHHHHHTC-CHHHHHHHH--------------TTCCSSCBHHHHHHHHHHTT----CCHHHHH
T ss_pred HHHHHHHHH--HcCCHHHHHHHHcC-CHHHHHHHH--------------cCCcCCCCHHHHHHHHHHHC----CCHHHHH
Confidence 344444443 33588999999999 556777776 67776789999999999874 8899998
Q ss_pred hhccc
Q 025511 224 SKSNQ 228 (251)
Q Consensus 224 ~~sN~ 228 (251)
..|+.
T Consensus 74 ~~~~~ 78 (82)
T d2ofya1 74 AVVTF 78 (82)
T ss_dssp TTCCC
T ss_pred hhcCC
Confidence 88764
No 83
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]}
Probab=37.97 E-value=12 Score=28.47 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=23.1
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhc
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENM 183 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~ 183 (251)
+-++|..+||++.+.+++++++|.+.
T Consensus 104 ~~~~L~~~fGlt~e~Iv~~~~~ll~k 129 (143)
T d1r9ja3 104 PAGVLYKKFGITVEEVVRTGRELAKR 129 (143)
T ss_dssp CHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 45779999999999999999999863
No 84
>d1wvec1 a.3.1.1 (C:602-675) p-Cresol methylhydroxylase, cytochrome c subunit {Pseudomonas putida [TaxId: 303]}
Probab=37.54 E-value=7.7 Score=25.67 Aligned_cols=16 Identities=25% Similarity=0.713 Sum_probs=14.7
Q ss_pred EEcHHHHHHHHHHHHh
Q 025511 198 YISQAEMKAVADYIKR 213 (251)
Q Consensus 198 YIS~EEm~aVA~fI~q 213 (251)
.+|++|+.+|+.||+.
T Consensus 56 ~lsd~ei~~l~~Yi~s 71 (74)
T d1wvec1 56 YVDDESLTQVAEYLSS 71 (74)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 4999999999999986
No 85
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=37.16 E-value=37 Score=25.42 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=20.2
Q ss_pred eCCCceEE---EcHHHHHHHHHHHHhcC
Q 025511 191 DDRGKYIY---ISQAEMKAVADYIKRQG 215 (251)
Q Consensus 191 DDRGKFIY---IS~EEm~aVA~fI~qrG 215 (251)
|..|+.|| |+++.+..+.+++.+.+
T Consensus 71 ~~~~~~i~~~~i~~~~~~~i~~~~~~~~ 98 (285)
T d1nrwa_ 71 DPEGRLYHHETIDKKRAYDILSWLESEN 98 (285)
T ss_dssp CTTCCEEEECCCCHHHHHHHHHHHHHTT
T ss_pred ecCCceeeeccCCHHHHHHHHHHHHHcC
Confidence 44566665 89999999999999876
No 86
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=36.76 E-value=25 Score=22.69 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=34.3
Q ss_pred HHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCccee
Q 025511 148 VEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGV 189 (251)
Q Consensus 148 I~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGV 189 (251)
+..|..+- +.-.|||...||+.+-+-+-+.+|++.|.|.=.
T Consensus 5 l~~i~~~p-isr~eLa~~~gls~~TVs~~v~~L~~~GlV~e~ 45 (62)
T d2hoea1 5 LKRIMKSP-VSRVELAEELGLTKTTVGEIAKIFLEKGIVVEE 45 (62)
T ss_dssp HHHHHHSC-BCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHCC-cCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEC
Confidence 45566555 578899999999999999999999999998543
No 87
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.60 E-value=13 Score=28.25 Aligned_cols=26 Identities=8% Similarity=0.075 Sum_probs=22.8
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhc
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENM 183 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~ 183 (251)
+-++|-.+||++++.++++|+++.+.
T Consensus 107 ~~~~L~~~fGlt~~~I~~~v~~~L~~ 132 (146)
T d1gpua3 107 KAPEVFKFFGFTPEGVAERAQKTIAF 132 (146)
T ss_dssp CHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999998853
No 88
>d1gdva_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Red alga (Porphyra yezoensis) [TaxId: 2788]}
Probab=36.57 E-value=7.6 Score=25.33 Aligned_cols=16 Identities=19% Similarity=0.518 Sum_probs=14.5
Q ss_pred EcHHHHHHHHHHHHhc
Q 025511 199 ISQAEMKAVADYIKRQ 214 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr 214 (251)
+|++|+.+|+.||.+.
T Consensus 65 Lsd~ei~~v~~Yi~~~ 80 (85)
T d1gdva_ 65 LVDEDIEDAANYVLSQ 80 (85)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8999999999999753
No 89
>d1xmaa_ a.4.5.61 (A:) Predicted transcriptional regulator {Clostridium thermocellum [TaxId: 1515]}
Probab=36.50 E-value=60 Score=22.41 Aligned_cols=48 Identities=15% Similarity=0.301 Sum_probs=38.3
Q ss_pred cCCChHHHHHHHHHHHhcCCcceee--eCCC---ceEEEcHHHHHHHHHHHHh
Q 025511 166 FKLRTQECINRITSLENMGRLSGVM--DDRG---KYIYISQAEMKAVADYIKR 213 (251)
Q Consensus 166 FgLrTqdvI~RIq~Lea~G~LTGVi--DDRG---KFIYIS~EEm~aVA~fI~q 213 (251)
++++..-+---+..|+++|-|++-. .+.| |+-.||+.--+.+.++++.
T Consensus 38 ~~is~gslY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~iT~~G~~~l~~~~~~ 90 (103)
T d1xmaa_ 38 YVIKETTLYSAFARLEKNGYIKSYYGEETQGKRRTYYRITPEGIKYYKQKCEE 90 (103)
T ss_dssp CCCCHHHHHHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHHHHHHHHHHHHH
T ss_pred ecCCCCchHHHHHHHHHCCCeEEEeeccCCCCCceEEEECHHHHHHHHHHHHH
Confidence 5788899999999999999999753 3333 4667999999999888875
No 90
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=36.06 E-value=31 Score=24.45 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=37.8
Q ss_pred CChHHHHHHHHHHHhcCCcceeeeCCC----ceEEEcHHHHHHHHHHHHh
Q 025511 168 LRTQECINRITSLENMGRLSGVMDDRG----KYIYISQAEMKAVADYIKR 213 (251)
Q Consensus 168 LrTqdvI~RIq~Lea~G~LTGViDDRG----KFIYIS~EEm~aVA~fI~q 213 (251)
++..-+-.-+..|+.+|-|++-.++.| ||-.||++-..++.++++.
T Consensus 44 ~~~gtiY~~L~rLe~~G~I~~~~~~~~g~~rk~Y~IT~~G~~~l~~~~~~ 93 (114)
T d2esha1 44 GHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREILRS 93 (114)
T ss_dssp CCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHCCCeEEEeecCCCCCcEEEEECHHHHHHHHHHHHH
Confidence 344567778999999999999776533 7888999999999999886
No 91
>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus subtilis [TaxId: 1423]}
Probab=35.72 E-value=10 Score=26.51 Aligned_cols=21 Identities=10% Similarity=-0.054 Sum_probs=15.1
Q ss_pred HHHHHhcCCcceeeeCCCceE
Q 025511 177 ITSLENMGRLSGVMDDRGKYI 197 (251)
Q Consensus 177 Iq~Lea~G~LTGViDDRGKFI 197 (251)
+-.+..+..+-.|+|+.|+|+
T Consensus 96 ~~~~~~~~~~l~Vvd~~~~~~ 116 (132)
T d1yava3 96 GFGMVINNGFVCVENDEQVFE 116 (132)
T ss_dssp HHHHTTTCSEEEEECTTCBEE
T ss_pred HHHHHHhCCEEEEEccCCEEE
Confidence 333344556778999999999
No 92
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=35.45 E-value=8.3 Score=26.48 Aligned_cols=17 Identities=12% Similarity=0.346 Sum_probs=15.2
Q ss_pred EcHHHHHHHHHHHHhcC
Q 025511 199 ISQAEMKAVADYIKRQG 215 (251)
Q Consensus 199 IS~EEm~aVA~fI~qrG 215 (251)
+|++|+.+|+.||+++.
T Consensus 80 Lsd~ei~~v~aYi~s~~ 96 (104)
T d1kv9a1 80 LKPEEVEQIKLYVMSRE 96 (104)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 79999999999998753
No 93
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.04 E-value=37 Score=22.85 Aligned_cols=44 Identities=23% Similarity=0.346 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 144 LADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 144 L~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
+-.|+.-+...+-..--|||..||+.-.++=.-+=+|+..|.+.
T Consensus 4 vl~~l~~lg~~~~~tA~~LA~kl~vpKk~iNr~LYsL~~kgkl~ 47 (59)
T d2gxba1 4 ILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQ 47 (59)
T ss_dssp HHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHhcCCccchhHHHHHHHhCCcHHHHHHHHHHHHHccchh
Confidence 45677778889999999999999999888877888999988764
No 94
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.74 E-value=16 Score=31.04 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=33.7
Q ss_pred HHHHHHh--cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHH
Q 025511 147 FVEYIKK--HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 147 FI~YIK~--~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~ 209 (251)
.++++.. ...+.++|||..-|++.+|+|.-+ +..|.|.=. ..+-+|.++++-++.+.+
T Consensus 193 i~~~L~~~~~~~~si~dis~~T~i~~~Dii~tL---~~l~~l~~~--~~~~~i~~~~~~i~~~~~ 252 (270)
T d2ozua1 193 ILECLYHQNDKQISIKKLSKLTGICPQDITSTL---HHLRMLDFR--SDQFVIIRREKLIQDHMA 252 (270)
T ss_dssp HHHHHHHC-----CHHHHHHHHCBCHHHHHHHH---HHTTCC-----------CCCHHHHHHHHH
T ss_pred HHHHHHhCCCCceeHHHHHHHhCCCHHHHHHHH---HHCCCEEEE--CCeEEEEeCHHHHHHHHH
Confidence 3444533 337899999999999999998755 455655311 223447888888777654
No 95
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=34.66 E-value=35 Score=24.03 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=39.2
Q ss_pred cCccchHhHHhHc-CCChHHHHHHHHHHHhcCCcceeeeCCC--ceEE-EcHH
Q 025511 154 HKCIPLEDLAAEF-KLRTQECINRITSLENMGRLSGVMDDRG--KYIY-ISQA 202 (251)
Q Consensus 154 ~KVV~LEDLAa~F-gLrTqdvI~RIq~Lea~G~LTGViDDRG--KFIY-IS~E 202 (251)
....-..||.... |+++.-.-+|+++|++.|-|.=..+..+ ++.| +|+-
T Consensus 31 ~g~~rF~el~~~l~gIs~~~Ls~rLkeL~~~glv~r~~~~~~p~~veY~LT~~ 83 (102)
T d2fswa1 31 RRIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPL 83 (102)
T ss_dssp TSCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHH
T ss_pred cCCCCHHHHHhhCcccchhHHHHHHHHHHHCCceeecccCCCCCeehhhhhHh
Confidence 3456788999997 9999999999999999999988777643 4555 5653
No 96
>d1cyja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=33.97 E-value=8.8 Score=25.35 Aligned_cols=15 Identities=40% Similarity=0.789 Sum_probs=14.1
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+|+.||..
T Consensus 67 Lsd~ei~~v~aYi~~ 81 (90)
T d1cyja_ 67 LSEEEIQAVAEYVFK 81 (90)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 899999999999975
No 97
>d1p2fa1 a.4.6.1 (A:121-217) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=33.91 E-value=14 Score=25.02 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=30.7
Q ss_pred CCCceEEEcHHHHHHHHHHHHhcCCc-cHHHHHhhc
Q 025511 192 DRGKYIYISQAEMKAVADYIKRQGRV-SISHLASKS 226 (251)
Q Consensus 192 DRGKFIYIS~EEm~aVA~fI~qrGRV-SisELa~~s 226 (251)
-.|+-|-+|+.|+.-++-++...|+| |..+|....
T Consensus 19 ~~~~~i~Lt~~E~~lL~~L~~~~g~vvsr~~l~~~v 54 (97)
T d1p2fa1 19 LKGKRIHLPKKEFEILLFLAENAGKVVTREKLLETF 54 (97)
T ss_dssp ETTEECCCCHHHHHHHHHHHHTTTSCEEHHHHHHHH
T ss_pred ECCEEEEcCHHHHHHHHHHhhhhhhhhhhhhhheee
Confidence 35889999999999999999999987 778887765
No 98
>d1c6sa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Cyanobacterium (Synechococcus elongatus) [TaxId: 32046]}
Probab=33.89 E-value=8 Score=25.41 Aligned_cols=17 Identities=24% Similarity=0.546 Sum_probs=15.0
Q ss_pred EcHHHHHHHHHHHHhcC
Q 025511 199 ISQAEMKAVADYIKRQG 215 (251)
Q Consensus 199 IS~EEm~aVA~fI~qrG 215 (251)
+|++|+.+|+.||.++-
T Consensus 65 Ls~~ei~~v~aYi~~~a 81 (87)
T d1c6sa_ 65 LTDEQIQDVAAYVLDQA 81 (87)
T ss_dssp SCSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 79999999999997653
No 99
>d1cy9a_ e.10.1.1 (A:) DNA topoisomerase I, 67K N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.82 E-value=32 Score=27.14 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=56.2
Q ss_pred chhHHHHHHHHHHhcCccc---------------------hHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEE
Q 025511 140 DRDLLADFVEYIKKHKCIP---------------------LEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIY 198 (251)
Q Consensus 140 sq~lL~~FI~YIK~~KVV~---------------------LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIY 198 (251)
+++....+++-++..+.++ .-+.+..||++.+.+.+-.|.|=..|-||--=-|-. |
T Consensus 37 ~~~~a~~~~~~l~~~~~~v~~v~~k~~~~~pP~pf~l~~Lq~~as~~~g~s~~~tl~iaQ~LYe~g~ITYPRTds~---~ 113 (260)
T d1cy9a_ 37 NKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDST---N 113 (260)
T ss_dssp SHHHHHHHHHHHHHSCEEEEEEEEEEEEECCCCCBCHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTSBCCSCCCCC---C
T ss_pred CHHHHHHHHHHHhcCCeEEEEeecccccccCCccccHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCceeecccccc---c
Confidence 4556788888887665332 233667899999999999999999999998777755 4
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|.+....+.++|..
T Consensus 114 l~~~~~~~~~~~i~~ 128 (260)
T d1cy9a_ 114 LSQDAVNMVRGYISD 128 (260)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH
Confidence 699999999999976
No 100
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=33.42 E-value=9.8 Score=25.09 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=13.9
Q ss_pred EEcHHHHHHHHHHHH
Q 025511 198 YISQAEMKAVADYIK 212 (251)
Q Consensus 198 YIS~EEm~aVA~fI~ 212 (251)
-+|++|+.+|+.||.
T Consensus 67 ~Lsd~ei~~vv~Yi~ 81 (83)
T d1cc5a_ 67 DCSDDELKAAIGKMS 81 (83)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 499999999999996
No 101
>d1fcdc1 a.3.1.4 (C:1-80) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=33.40 E-value=9.5 Score=24.92 Aligned_cols=16 Identities=38% Similarity=0.611 Sum_probs=14.4
Q ss_pred EcHHHHHHHHHHHHhc
Q 025511 199 ISQAEMKAVADYIKRQ 214 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr 214 (251)
+|++|+.+||.||.+.
T Consensus 61 Lsd~ei~~la~Y~~sq 76 (80)
T d1fcdc1 61 YSTADFEKMAGYFKQQ 76 (80)
T ss_dssp SCHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHhC
Confidence 7999999999999754
No 102
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=33.02 E-value=24 Score=25.05 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=46.2
Q ss_pred HHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHH
Q 025511 148 VEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEM 204 (251)
Q Consensus 148 I~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm 204 (251)
+-|+..+.-|..++||...|++..-+..-++.|.+.|-+..+---.|=|.--.|+++
T Consensus 10 L~~la~~~~~ss~~IA~~~~~~~~~v~kIl~~L~~aglV~s~rG~~GGyLar~p~~I 66 (127)
T d1xd7a_ 10 LSLISMDEKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASLKKDPADI 66 (127)
T ss_dssp HHHHHTCSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSSSSCEESSCGGGC
T ss_pred HHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHHHhCcccccCCCCCccccCCHHhC
Confidence 445666667899999999999999888999999999999988887666655556653
No 103
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=32.77 E-value=45 Score=24.06 Aligned_cols=81 Identities=6% Similarity=0.103 Sum_probs=62.6
Q ss_pred chhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceee--eCCCceEEEcHHHHHHHHHHHHhcCCc
Q 025511 140 DRDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVM--DDRGKYIYISQAEMKAVADYIKRQGRV 217 (251)
Q Consensus 140 sq~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGVi--DDRGKFIYIS~EEm~aVA~fI~qrGRV 217 (251)
+.++=+.+|..++.. +..-++|..||++..-|..-++...+.|.+.--= -.+++ -+|+++...+..++.++..+
T Consensus 18 s~dlR~rIv~~~~~G--~s~r~iA~~~~VS~~tV~k~l~r~~~~G~~~~~~~~~~rpr--~~t~~~~~~I~~~~~~~P~~ 93 (123)
T d1pdnc_ 18 PNNIRLKIVEMAADG--IRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR--IATPEIENRIEEYKRSSPGM 93 (123)
T ss_dssp CHHHHHHHHHHHHTT--CCHHHHHHHHTCCHHHHHHHHHHHHHHCCSSCCCCSCCCCC--SSCSTHHHHHHHTTTTCTTC
T ss_pred CHHHHHHHHHHHHhc--CCHHHHHHHHCcCHHHHHHHHHHHHccCCcCcCCCCCCCCC--CCCHHHHHHHHHHHHhCCCc
Confidence 455567788888654 4677999999999999888899999988865321 12233 37899999999999999999
Q ss_pred cHHHHHh
Q 025511 218 SISHLAS 224 (251)
Q Consensus 218 SisELa~ 224 (251)
+..||.+
T Consensus 94 t~~El~~ 100 (123)
T d1pdnc_ 94 FSWEIRE 100 (123)
T ss_dssp CHHHHHH
T ss_pred cHHHHHH
Confidence 9887754
No 104
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.74 E-value=20 Score=23.77 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=25.2
Q ss_pred hHhHHhHcCCChHHHHHHHHHHHhcCCcc
Q 025511 159 LEDLAAEFKLRTQECINRITSLENMGRLS 187 (251)
Q Consensus 159 LEDLAa~FgLrTqdvI~RIq~Lea~G~LT 187 (251)
.+-+|..+|=+..+|+.|.+.|.++.+.+
T Consensus 27 W~~IA~~vgkt~~ev~~~~k~l~e~~~~~ 55 (59)
T d2cqqa1 27 WEKIAHELGRSVTDVTTKAKQLKDSVTCS 55 (59)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhcccC
Confidence 55689999999999999999999988744
No 105
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=32.48 E-value=7.1 Score=25.79 Aligned_cols=17 Identities=12% Similarity=0.362 Sum_probs=14.7
Q ss_pred EEEcHHHHHHHHHHHHh
Q 025511 197 IYISQAEMKAVADYIKR 213 (251)
Q Consensus 197 IYIS~EEm~aVA~fI~q 213 (251)
=-+|++|+.+|+.||.+
T Consensus 63 ~~Lsd~ei~~v~~Yi~~ 79 (81)
T d1kx7a_ 63 TDCTDEDYKAAIEFMSK 79 (81)
T ss_dssp SSCCHHHHHHHHHHHSS
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 34999999999999964
No 106
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=32.02 E-value=14 Score=24.01 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=20.1
Q ss_pred HHHHHHHHhcCCccHHHHHhhcc
Q 025511 205 KAVADYIKRQGRVSISHLASKSN 227 (251)
Q Consensus 205 ~aVA~fI~qrGRVSisELa~~sN 227 (251)
..|-.+|.+.|.+|.+||++..+
T Consensus 9 ~~Il~~l~~~g~~sr~eLa~~~g 31 (71)
T d1z05a1 9 GRVYKLIDQKGPISRIDLSKESE 31 (71)
T ss_dssp HHHHHHHHHHCSBCHHHHHHHHT
T ss_pred HHHHHHHHHcCCcCHHHHHHHHC
Confidence 57889999999999999998754
No 107
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=31.54 E-value=74 Score=22.57 Aligned_cols=53 Identities=21% Similarity=0.382 Sum_probs=43.2
Q ss_pred HHHHH-HhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeee---CCCceEEE
Q 025511 147 FVEYI-KKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMD---DRGKYIYI 199 (251)
Q Consensus 147 FI~YI-K~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViD---DRGKFIYI 199 (251)
.++++ +.++=|.=++||...|++..+|.+-+..|-..|-++++-- +.|-|+|-
T Consensus 23 v~~~L~~~~~evtDe~iA~~tgi~in~VRk~Ly~L~~~~L~~y~R~kd~~~gw~~Y~ 79 (88)
T d1q1ha_ 23 VLRILLDKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYY 79 (88)
T ss_dssp HHHHHHHHCSCBCHHHHHHTTTSCHHHHHHHHHHHHHHTSCEEEEEC---CCCCEEE
T ss_pred HHHHHHhccCcCCHHHHHHHhCCcHHHHHHHHHHHHhCCceEEEEeecCCCCcEEEE
Confidence 44444 3445688899999999999999999999999999998753 46999984
No 108
>d1m70a1 a.3.1.4 (A:1-92) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=31.14 E-value=12 Score=24.34 Aligned_cols=16 Identities=25% Similarity=0.598 Sum_probs=14.7
Q ss_pred EcHHHHHHHHHHHHhc
Q 025511 199 ISQAEMKAVADYIKRQ 214 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr 214 (251)
+|++|+..|+.||++.
T Consensus 73 Lsd~ei~dl~aYi~sl 88 (92)
T d1m70a1 73 LSDQDLEDIAAYFSSQ 88 (92)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHC
Confidence 9999999999999864
No 109
>d1gksa_ a.3.1.1 (A:) Cytochrome c551 {Ectothiorhodospira halophila [TaxId: 1053]}
Probab=30.86 E-value=12 Score=24.92 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=17.6
Q ss_pred eeeeCCCceEEEcHHHHHHHHHHHHh
Q 025511 188 GVMDDRGKYIYISQAEMKAVADYIKR 213 (251)
Q Consensus 188 GViDDRGKFIYIS~EEm~aVA~fI~q 213 (251)
|.|=.-|. -+|++|+.+|+.||..
T Consensus 53 ~~MPa~g~--~LsdeeI~~v~~Yi~~ 76 (78)
T d1gksa_ 53 GAMPAYDG--RADREDLVKAIEYMLS 76 (78)
T ss_dssp TTBCCCBT--TBCHHHHHHHHHHHHT
T ss_pred cccCccCC--CCCHHHHHHHHHHHHH
Confidence 44554432 2899999999999964
No 110
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.85 E-value=71 Score=21.74 Aligned_cols=54 Identities=20% Similarity=0.333 Sum_probs=39.7
Q ss_pred HHHHHHhcCccchHhHHhHc---CC-ChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHH
Q 025511 147 FVEYIKKHKCIPLEDLAAEF---KL-RTQECINRITSLENMGRLSGVMDDRGKYIYISQAE 203 (251)
Q Consensus 147 FI~YIK~~KVV~LEDLAa~F---gL-rTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EE 203 (251)
...-|+.+.|-.=+||+..+ |+ -||-+|+| +|.+.|.+- |-+..|+|+|.-|++
T Consensus 7 I~~li~~~~i~tQ~eL~~~L~~~Gi~vTQaTlSR--DL~eLg~vK-v~~~~g~~~Y~lp~~ 64 (75)
T d1b4aa1 7 IREIIMSNDIETQDELVDRLREAGFNVTQATVSR--DIKEMQLVK-VPMANGRYKYSLPSD 64 (75)
T ss_dssp HHHHHHHSCCCSHHHHHHHHHHTTCCCCHHHHHH--HHHHTTCEE-EECSSSCEEEECTTC
T ss_pred HHHHHHhCCCCCHHHHHHHHHHcCCceeHHHHHH--HHHHhCCEE-eeCCCCcEEEecCCc
Confidence 34457888888777765432 33 38999997 677777666 789999999988765
No 111
>d1cnoa_ a.3.1.1 (A:) Cytochrome c552 {Pseudomonas nautica [TaxId: 2743]}
Probab=30.85 E-value=12 Score=24.46 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=14.5
Q ss_pred EcHHHHHHHHHHHHhc
Q 025511 199 ISQAEMKAVADYIKRQ 214 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr 214 (251)
+|++|+..||.||...
T Consensus 67 Lsd~di~~laaYi~sl 82 (86)
T d1cnoa_ 67 LSDADIANLAAYYASN 82 (86)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhC
Confidence 7999999999999864
No 112
>d1a56a_ a.3.1.1 (A:) Cytochrome c552 {Nitrosomonas europaea [TaxId: 915]}
Probab=30.55 E-value=9.6 Score=25.02 Aligned_cols=18 Identities=39% Similarity=0.578 Sum_probs=15.2
Q ss_pred eEEEcHHHHHHHHHHHHh
Q 025511 196 YIYISQAEMKAVADYIKR 213 (251)
Q Consensus 196 FIYIS~EEm~aVA~fI~q 213 (251)
|--+|++|+.+|+.||..
T Consensus 62 ~~~Lsd~ei~~l~~Yl~s 79 (81)
T d1a56a_ 62 NVNVSDADAKALADWILT 79 (81)
T ss_dssp CCSSSSHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHH
Confidence 334899999999999974
No 113
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=30.12 E-value=83 Score=21.97 Aligned_cols=63 Identities=16% Similarity=0.224 Sum_probs=48.7
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHH--HHhcCCccHHHHHhh
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADY--IKRQGRVSISHLASK 225 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~f--I~qrGRVSisELa~~ 225 (251)
.+.++|..+|+++. -|.--+..|-|..+-.+.|.|=|-|++.+..+... .+.-| +|++++...
T Consensus 2 ~Ige~A~~~gvs~~----TlR~Ye~~GLl~p~~r~~~gyR~Y~~~~i~~l~~I~~lr~~G-~sl~eI~~~ 66 (127)
T d1q06a_ 2 NISDVAKITGLTSK----AIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVG-FNLEESGEL 66 (127)
T ss_dssp CHHHHHHHHTCCHH----HHHHHHHTTCSCCCEECTTSCEECCHHHHHHHHHHHHHHHTT-CCHHHHHHH
T ss_pred CHHHHHHHHCcCHH----HHHHHHHcCCCCCCccCCcCcccchHHHHHHHHHHHHHHHcC-CCHHHHHHH
Confidence 36789999999764 46778899999988778888888899999887643 33434 888877643
No 114
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=30.08 E-value=39 Score=24.07 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=38.1
Q ss_pred CccchHhHHhHc-CCChHHHHHHHHHHHhcCCcceeeeCCC--ceEE-EcHH
Q 025511 155 KCIPLEDLAAEF-KLRTQECINRITSLENMGRLSGVMDDRG--KYIY-ISQA 202 (251)
Q Consensus 155 KVV~LEDLAa~F-gLrTqdvI~RIq~Lea~G~LTGViDDRG--KFIY-IS~E 202 (251)
...-..||.... |+++.-+-+|+++|++.|-|.=..++.+ ++.| +|+-
T Consensus 31 g~~RF~el~~~l~gIS~~~Ls~rLk~L~~~glv~R~~~~~~p~~veY~LT~~ 82 (108)
T d1z7ua1 31 GTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPE 82 (108)
T ss_dssp SCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHH
T ss_pred CCCCHHHHHHHCcCCChhHHHHHHHHHHHCCcceeeccCCCcceehhhhchh
Confidence 455788999998 8999999999999999999987666543 4555 5664
No 115
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.91 E-value=48 Score=24.73 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=39.3
Q ss_pred cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCC-ceEE-EcHH
Q 025511 154 HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRG-KYIY-ISQA 202 (251)
Q Consensus 154 ~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRG-KFIY-IS~E 202 (251)
....-..||....|+++.-+-+|+++|++.|-|.=+.++.+ ++.| +|+.
T Consensus 31 ~G~~rf~el~~~lgis~~vLs~rL~~L~~~gLv~r~~~~~p~r~~Y~LT~~ 81 (142)
T d2f2ea1 31 EGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDK 81 (142)
T ss_dssp TTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHH
T ss_pred cCCCCHHHHHHHhhccHHHHHHHHHHHHHhcceeeecCCCCCeeEEecCcC
Confidence 45677899999999999999999999999999987766543 3445 5664
No 116
>d1p6ra_ a.4.5.39 (A:) Penicillinase repressor BlaI {Bacillus licheniformis [TaxId: 1402]}
Probab=27.90 E-value=26 Score=23.83 Aligned_cols=43 Identities=14% Similarity=0.285 Sum_probs=31.7
Q ss_pred hHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEE---EcHHHH
Q 025511 161 DLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIY---ISQAEM 204 (251)
Q Consensus 161 DLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIY---IS~EEm 204 (251)
.|....+.+..-+.--++.|.+-|-|+= --..+.|+| ||++|+
T Consensus 32 ~l~~~~~~~~tTv~T~L~rL~~KG~l~~-~k~gr~~~Y~p~is~eey 77 (82)
T d1p6ra_ 32 ELSKTSTWSPKTIQTMLLRLIKKGALNH-HKEGRVFVYTPNIDESDY 77 (82)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHTTSEEE-EEETTEEEEEESCSSSTT
T ss_pred HhccccCCcHhHHHHHHHHHHHCCCeEE-EecCCeEEEEecCCHHHH
Confidence 4566788888888889999999999883 223446788 566553
No 117
>d1fcdc2 a.3.1.4 (C:81-174) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=27.87 E-value=14 Score=24.69 Aligned_cols=16 Identities=13% Similarity=0.142 Sum_probs=14.2
Q ss_pred EEcHHHHHHHHHHHHh
Q 025511 198 YISQAEMKAVADYIKR 213 (251)
Q Consensus 198 YIS~EEm~aVA~fI~q 213 (251)
-+|++|+.+|+.||.+
T Consensus 77 ~LSd~di~alaaY~~S 92 (94)
T d1fcdc2 77 AEGDAGLDALFAFYAS 92 (94)
T ss_dssp GSTHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 3799999999999975
No 118
>d1ys7a1 a.4.6.1 (A:128-233) Transcriptional regulatory protein PrrA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.74 E-value=20 Score=24.88 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=31.8
Q ss_pred CCCceEEEcHHHHHHHHHHHHhcCCc-cHHHHHhhcc
Q 025511 192 DRGKYIYISQAEMKAVADYIKRQGRV-SISHLASKSN 227 (251)
Q Consensus 192 DRGKFIYIS~EEm~aVA~fI~qrGRV-SisELa~~sN 227 (251)
-.|+=|.+|+.|+.=+.-|+...|+| |..+|.+.+-
T Consensus 26 ~~~~~i~Lt~~E~~lL~~L~~~~g~~vsr~~L~~~vw 62 (106)
T d1ys7a1 26 VNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVW 62 (106)
T ss_dssp ETTEECCCCHHHHHHHHHHHHTTTCCBCHHHHHHHHH
T ss_pred ECCEEEECCHHHhHHHHHHhhhhhhhhhHHHHHhhhc
Confidence 36888999999999999999999997 7789988774
No 119
>d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=27.64 E-value=16 Score=22.90 Aligned_cols=14 Identities=36% Similarity=0.449 Sum_probs=12.5
Q ss_pred eeeCCCceEEEcHH
Q 025511 189 VMDDRGKYIYISQA 202 (251)
Q Consensus 189 ViDDRGKFIYIS~E 202 (251)
++|..|+++|+++.
T Consensus 5 ~~D~~G~I~~~N~a 18 (106)
T d1xj3a1 5 VIDGHGIIQLFSTA 18 (106)
T ss_dssp EEETTSBEEEECHH
T ss_pred EECCCCcEEEEcHH
Confidence 68999999999985
No 120
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.10 E-value=20 Score=23.41 Aligned_cols=24 Identities=29% Similarity=0.252 Sum_probs=20.7
Q ss_pred HHHHHHHHHhcCCccHHHHHhhcc
Q 025511 204 MKAVADYIKRQGRVSISHLASKSN 227 (251)
Q Consensus 204 m~aVA~fI~qrGRVSisELa~~sN 227 (251)
...|-..|+++|-+|.+||++.++
T Consensus 7 ~~~Il~~i~~~g~~sr~eLa~~~g 30 (70)
T d1z6ra1 7 AGAVYRLIDQLGPVSRIDLSRLAQ 30 (70)
T ss_dssp HHHHHHHHHSSCSCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCcCHHHHHHHHC
Confidence 356889999999999999998765
No 121
>d2b0la1 a.4.5.66 (A:167-257) GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=27.05 E-value=52 Score=23.70 Aligned_cols=43 Identities=21% Similarity=0.434 Sum_probs=35.2
Q ss_pred ccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeC-----CCceEEEcHH
Q 025511 156 CIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDD-----RGKYIYISQA 202 (251)
Q Consensus 156 VV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDD-----RGKFIYIS~E 202 (251)
+++-.-+|-.+|+....++|-+..|+.-| ||.. .|.||-|-.+
T Consensus 34 llvASkiADrvgiTRSVIVNALRK~ESAG----vIEsrSlGMKGTyikvln~ 81 (91)
T d2b0la1 34 LLVASKIADRVGITRSVIVNALRKLESAG----VIESRSLGMKGTYIKVLNN 81 (91)
T ss_dssp EECHHHHHHHHTCCHHHHHHHHHHHHHTT----SEEEEECSSSCEEEEECCH
T ss_pred eEeehhhhhhhCchHHHHHHHHHHhhhcc----eeeeccCCCCeeeeeeecH
Confidence 45666799999999999999999999976 5554 5999987543
No 122
>d1xmka1 a.4.5.19 (A:294-366) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.03 E-value=48 Score=22.90 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=35.1
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCCh-HHHHHHHHHHHhcCCccee
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRT-QECINRITSLENMGRLSGV 189 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrT-qdvI~RIq~Lea~G~LTGV 189 (251)
....+|+...-=..-=+||..+|+++ .||=.-+-+|+..|.+...
T Consensus 8 ekI~~~L~~~g~~~Al~iak~lGl~kakeVN~~LY~L~k~g~v~k~ 53 (73)
T d1xmka1 8 EKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQ 53 (73)
T ss_dssp HHHHHHHHHTCCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCchHHHHHHHhCCCcHHHHhHHHHHHHHCCCeecC
Confidence 34566776666555667999999999 4777778999999999864
No 123
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.88 E-value=54 Score=22.28 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHHHHhcCCc-cH
Q 025511 141 RDLLADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADYIKRQGRV-SI 219 (251)
Q Consensus 141 q~lL~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~fI~qrGRV-Si 219 (251)
+..|..+.++|-.+=-..-..||.+.|++..+ |+.|+.= ..+. +.+.=++-+-.|..+.|.- ++
T Consensus 6 ~~dl~~~f~~ia~~lg~~W~~La~~Lgl~~~~-I~~I~~~-~~~~-------------~~e~~~~mL~~W~~~~g~~at~ 70 (103)
T d2gf5a1 6 EEDLCAAFNVICDNVGKDWRRLARQLKVSDTK-IDSIEDR-YPRN-------------LTERVRESLRIWKNTEKENATV 70 (103)
T ss_dssp HHHHHHHHHHHHHSCCTTHHHHHHHTTCCHHH-HHHHHHH-SSSC-------------SHHHHHHHHHHHHHHTTTTCCH
T ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHcCCCHHH-HHHHHHH-cCCC-------------HHHHHHHHHHHHHHHcCCCcHH
Confidence 44578888888776556788999999997665 6667531 1111 1223345566666666543 45
Q ss_pred HHHHhhccc
Q 025511 220 SHLASKSNQ 228 (251)
Q Consensus 220 sELa~~sN~ 228 (251)
..|..+..+
T Consensus 71 ~~L~~aL~~ 79 (103)
T d2gf5a1 71 AHLVGALRS 79 (103)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 124
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=26.75 E-value=25 Score=25.53 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=22.1
Q ss_pred CChHHHHHHHHHHHhcCCcceeeeC
Q 025511 168 LRTQECINRITSLENMGRLSGVMDD 192 (251)
Q Consensus 168 LrTqdvI~RIq~Lea~G~LTGViDD 192 (251)
.+++++++.|..|=++..++|||=.
T Consensus 73 ~t~~~l~~~I~~lN~d~~v~GIlvq 97 (121)
T d1b0aa2 73 TSEAELLELIDTLNADNTIDGILVQ 97 (121)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred ccHHHHHHHHHHHhCCCchhhhhhc
Confidence 4568999999999999999999853
No 125
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=26.38 E-value=22 Score=22.79 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=18.9
Q ss_pred HHHHHHHhcCCccHHHHHhhcc
Q 025511 206 AVADYIKRQGRVSISHLASKSN 227 (251)
Q Consensus 206 aVA~fI~qrGRVSisELa~~sN 227 (251)
++-..+++.||.|.++|+..+|
T Consensus 9 ~IL~~L~~~~r~s~~eiA~~l~ 30 (63)
T d2cg4a1 9 GILEALMGNARTAYAELAKQFG 30 (63)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHT
T ss_pred HHHHHHHHcCCCCHHHHHHHHC
Confidence 4677889999999999998875
No 126
>d1yyva1 a.4.5.69 (A:9-122) Putative transcriptional regulator YtfH {Salmonella typhimurium [TaxId: 90371]}
Probab=26.21 E-value=51 Score=23.63 Aligned_cols=49 Identities=16% Similarity=0.162 Sum_probs=39.3
Q ss_pred cCccchHhHHhHc-CCChHHHHHHHHHHHhcCCcceeeeCCC--ceEE-EcHH
Q 025511 154 HKCIPLEDLAAEF-KLRTQECINRITSLENMGRLSGVMDDRG--KYIY-ISQA 202 (251)
Q Consensus 154 ~KVV~LEDLAa~F-gLrTqdvI~RIq~Lea~G~LTGViDDRG--KFIY-IS~E 202 (251)
....-..||.... |+++.-.-+|+++|++.|-|.=..++.+ +..| +|+-
T Consensus 35 ~g~~RF~el~~~l~gis~~~Ls~rL~~Le~~glv~R~~~~~~p~~veY~LT~~ 87 (114)
T d1yyva1 35 DGTHRFSDLRRKMGGVSEKMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPL 87 (114)
T ss_dssp GCCEEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHH
T ss_pred cCCCCHHHHHHHccccchhHHHHHHHHHHHHHHHhhcccCCCCchhHhHhhHh
Confidence 3455678899998 8999999999999999999998887754 4555 5653
No 127
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=25.84 E-value=25 Score=22.52 Aligned_cols=24 Identities=25% Similarity=0.441 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCCccHHHHHhhcc
Q 025511 204 MKAVADYIKRQGRVSISHLASKSN 227 (251)
Q Consensus 204 m~aVA~fI~qrGRVSisELa~~sN 227 (251)
+++....+..+|-+|+.++++.++
T Consensus 7 l~aa~~l~~~~G~~ti~~Ia~~ag 30 (65)
T d2g7ga1 7 AEAALELVDRDGDFRMPDLARHLN 30 (65)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHhC
Confidence 355567778889999999999886
No 128
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.80 E-value=14 Score=26.31 Aligned_cols=38 Identities=18% Similarity=0.393 Sum_probs=25.6
Q ss_pred HHHHhhhcc-ceeccCCccchhcccCchhHHHHHHHHHHhcCccch
Q 025511 115 FEFEKWKGE-FSIDAEGTTENEVQDGDRDLLADFVEYIKKHKCIPL 159 (251)
Q Consensus 115 EEY~KwK~~-f~VEeeG~~~~e~ee~sq~lL~~FI~YIK~~KVV~L 159 (251)
..|+.|+.. +.|+.++. .-++..++.++||+.++++||
T Consensus 157 ~~~e~~~~~dl~IdT~~~-------s~ee~~~~Il~~l~~~~~i~~ 195 (195)
T d1x6va3 157 SEYEKPEAPELVLKTDSC-------DVNDCVQQVVELLQERDIVPV 195 (195)
T ss_dssp -CCCCCSSCSEEECTTTS-------CHHHHHHHHHHHHHHTTSSCS
T ss_pred cccCCCCCCCEEEECCCC-------CHHHHHHHHHHHHHHCcCCCC
Confidence 445666653 56664331 235578999999999999986
No 129
>d1iwga6 d.225.1.1 (A:725-812) Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains {Escherichia coli [TaxId: 562]}
Probab=25.29 E-value=38 Score=22.33 Aligned_cols=41 Identities=12% Similarity=0.089 Sum_probs=31.1
Q ss_pred chHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEE
Q 025511 158 PLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYI 199 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYI 199 (251)
+=-+-|+.+|++++++-+-|+.+. .|.-.|-+.+.|+=+.|
T Consensus 7 iDr~ka~~~Gvs~~~i~~~l~~~~-~g~~v~~~~~~~~~~~v 47 (88)
T d1iwga6 7 IDQEKAQALGVSINDINTTLGAAW-GGSYVNDFIDRGRVKKV 47 (88)
T ss_dssp CCHHHHHHHTCCHHHHHHHHHHHH-TCEEEEEEEETTEEEEE
T ss_pred ECHHHHHHcCCCHHHHHHHHHHhc-CCeeeEEEecCCeEeeE
Confidence 335789999999999999998665 56777777777764333
No 130
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=25.27 E-value=57 Score=20.44 Aligned_cols=51 Identities=25% Similarity=0.350 Sum_probs=35.6
Q ss_pred hcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHHHHhcCCccHHHHH
Q 025511 153 KHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADYIKRQGRVSISHLA 223 (251)
Q Consensus 153 ~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~fI~qrGRVSisELa 223 (251)
..+=....+||...|++. -.+++|. +|+- .+|.+-+.++|++.. ||+.+|-
T Consensus 11 ~~~g~tq~elA~~~gis~-~~is~~e--------------~g~~-~p~~~~l~~ia~~l~----v~~~~lf 61 (66)
T d1utxa_ 11 EKKKISQSELAALLEVSR-QTINGIE--------------KNKY-NPSLQLALKIAYYLN----TPLEDIF 61 (66)
T ss_dssp HHTTCCHHHHHHHHTSCH-HHHHHHH--------------TTSC-CCCHHHHHHHHHHTT----SCHHHHE
T ss_pred HHcCCCHHHHHHhcccCH-HHHHHHH--------------cCCC-CCCHHHHHHHHHHHC----CCHHHHc
Confidence 344446889999999954 4555554 4553 588888999998885 7777663
No 131
>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=24.70 E-value=11 Score=26.68 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=15.2
Q ss_pred EEcHHHHHHHHHHHHhc
Q 025511 198 YISQAEMKAVADYIKRQ 214 (251)
Q Consensus 198 YIS~EEm~aVA~fI~qr 214 (251)
.+|++|+.+|+.||...
T Consensus 106 ~Lsdedi~~vaaYi~~q 122 (135)
T d1e29a_ 106 NYTEDDIFDVAGYTLIA 122 (135)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 49999999999999864
No 132
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.45 E-value=30 Score=25.18 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=22.0
Q ss_pred CChHHHHHHHHHHHhcCCcceeeeC
Q 025511 168 LRTQECINRITSLENMGRLSGVMDD 192 (251)
Q Consensus 168 LrTqdvI~RIq~Lea~G~LTGViDD 192 (251)
.+++++++.|+.|=++..++|||=.
T Consensus 75 ~~e~el~~~I~~lN~d~~V~GIlvq 99 (125)
T d1a4ia2 75 TTESEVMKYITSLNEDSTVHGFLVQ 99 (125)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred hhHHHHHHHHHHHhccCCcceEEEe
Confidence 4678999999999999999999853
No 133
>d1m70a2 a.3.1.4 (A:93-190) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=24.22 E-value=17 Score=25.18 Aligned_cols=16 Identities=25% Similarity=0.578 Sum_probs=14.0
Q ss_pred EEcHHHHHHHHHHHHh
Q 025511 198 YISQAEMKAVADYIKR 213 (251)
Q Consensus 198 YIS~EEm~aVA~fI~q 213 (251)
-+|++|+.+||.||..
T Consensus 81 ~lsd~di~~la~Yias 96 (98)
T d1m70a2 81 KLSNKDIEALSSYIQG 96 (98)
T ss_dssp TCCHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHHHH
Confidence 3799999999999964
No 134
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=23.94 E-value=71 Score=21.98 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=33.6
Q ss_pred cCccchHhHHhHc-CCChHHHHHHHHHHHhcCCcceeeeCC
Q 025511 154 HKCIPLEDLAAEF-KLRTQECINRITSLENMGRLSGVMDDR 193 (251)
Q Consensus 154 ~KVV~LEDLAa~F-gLrTqdvI~RIq~Lea~G~LTGViDDR 193 (251)
....-..||.... |+++.-.-+|+++|++.|-|.=..++.
T Consensus 22 ~g~~rF~el~~~l~gis~~~Ls~rLk~Le~~glv~r~~~~~ 62 (95)
T d2hzta1 22 HGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQ 62 (95)
T ss_dssp TCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECS
T ss_pred cCCCCHHHHHHHhhcCChhHHHHHHHHHHHhHHHhheeccc
Confidence 3456788999887 999999999999999999998666553
No 135
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.80 E-value=35 Score=21.90 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=16.7
Q ss_pred cHHHHHHHHHHHHh----cCCccHHHHHhhcccc
Q 025511 200 SQAEMKAVADYIKR----QGRVSISHLASKSNQF 229 (251)
Q Consensus 200 S~EEm~aVA~fI~q----rGRVSisELa~~sN~l 229 (251)
|++|+..+=+..-. .|.||..||.....++
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~l 36 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL 36 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHh
Confidence 45666655554321 3666666666666554
No 136
>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=23.70 E-value=11 Score=26.28 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=15.6
Q ss_pred EcHHHHHHHHHHHHhcCC
Q 025511 199 ISQAEMKAVADYIKRQGR 216 (251)
Q Consensus 199 IS~EEm~aVA~fI~qrGR 216 (251)
+|++|+.+|+.||...-+
T Consensus 107 Lsdeei~av~aYi~~~p~ 124 (131)
T d1mz4a_ 107 LTEKDLVAIAGHILVEPK 124 (131)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 999999999999976543
No 137
>d1kb0a1 a.3.1.6 (A:579-675) Quinoprotein alcohol dehydrogenase, C-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=23.56 E-value=14 Score=24.99 Aligned_cols=15 Identities=13% Similarity=0.468 Sum_probs=14.1
Q ss_pred EcHHHHHHHHHHHHh
Q 025511 199 ISQAEMKAVADYIKR 213 (251)
Q Consensus 199 IS~EEm~aVA~fI~q 213 (251)
+|++|+.+|+.||+.
T Consensus 76 Ls~~ei~~i~aYl~~ 90 (97)
T d1kb0a1 76 LSGDDVESLKAFIQG 90 (97)
T ss_dssp SCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 799999999999985
No 138
>d1allb_ a.1.1.3 (B:) Allophycocyanin beta subunit {Spirulina platensis [TaxId: 118562]}
Probab=23.44 E-value=12 Score=29.12 Aligned_cols=39 Identities=18% Similarity=0.452 Sum_probs=29.4
Q ss_pred eCCCceEEEcHHHHHHHHHHHHhc-CCccH-HHHHhhcccccc
Q 025511 191 DDRGKYIYISQAEMKAVADYIKRQ-GRVSI-SHLASKSNQFID 231 (251)
Q Consensus 191 DDRGKFIYIS~EEm~aVA~fI~qr-GRVSi-sELa~~sN~lI~ 231 (251)
|++|+| +|+.||+++..|+..- -|+.+ .-|.++.+.|++
T Consensus 13 D~~gRy--ls~~eL~~l~~~~~~~~~Rl~aa~~L~~na~~Iv~ 53 (161)
T d1allb_ 13 DVQGKY--LDASAIQKLKAYFATGELRVRAATTISANAANIVK 53 (161)
T ss_dssp HTTTCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCC--CCHHHHHHHHHHHhccHHHHHHHHHHHhhHHHHHH
Confidence 678886 7999999999999865 56665 456666666654
No 139
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=23.09 E-value=23 Score=24.27 Aligned_cols=28 Identities=21% Similarity=0.399 Sum_probs=22.4
Q ss_pred EcHHHHHHHHHHHHhc----CCccHHHHHhhcc
Q 025511 199 ISQAEMKAVADYIKRQ----GRVSISHLASKSN 227 (251)
Q Consensus 199 IS~EEm~aVA~fI~qr----GRVSisELa~~sN 227 (251)
+|+.|- .||+||..+ ...|+.+|++.|+
T Consensus 16 Ls~~e~-~ia~yil~~~~~~~~~si~~lA~~~~ 47 (83)
T d2o3fa1 16 LPPSER-KLADYILAHPHKAIESTVNEISALAN 47 (83)
T ss_dssp SCHHHH-HHHHHHHHCHHHHHTCCHHHHHHHTT
T ss_pred CCHHHH-HHHHHHHcCHHHHHHccHHHHHHHHC
Confidence 566664 799999887 6778899999887
No 140
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.87 E-value=9.2 Score=25.08 Aligned_cols=29 Identities=10% Similarity=0.308 Sum_probs=21.2
Q ss_pred EEEcHHHHHHHHHHH--HhcCCccHHHHHhh
Q 025511 197 IYISQAEMKAVADYI--KRQGRVSISHLASK 225 (251)
Q Consensus 197 IYIS~EEm~aVA~fI--~qrGRVSisELa~~ 225 (251)
+++|++++..+...+ ...|+|+..++.+.
T Consensus 51 ~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~ 81 (83)
T d1wlza1 51 QILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 81 (83)
T ss_dssp CCCCHHHHHHHHTTSCBCTTSCBCHHHHHHH
T ss_pred CCCChhHHHHHhhccccCCCCcEeHHHHHHH
Confidence 456888888888777 34488888887664
No 141
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=22.48 E-value=20 Score=24.69 Aligned_cols=17 Identities=41% Similarity=0.499 Sum_probs=15.3
Q ss_pred EEcHHHHHHHHHHHHhc
Q 025511 198 YISQAEMKAVADYIKRQ 214 (251)
Q Consensus 198 YIS~EEm~aVA~fI~qr 214 (251)
-+|++|+.+|+.||+..
T Consensus 104 ~Lsdedi~ai~aYi~~~ 120 (129)
T d1f1ca_ 104 NISEDDLYNVAGYILLQ 120 (129)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHc
Confidence 49999999999999865
No 142
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=22.30 E-value=46 Score=23.75 Aligned_cols=45 Identities=9% Similarity=-0.035 Sum_probs=37.2
Q ss_pred cCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEc
Q 025511 154 HKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYIS 200 (251)
Q Consensus 154 ~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS 200 (251)
.+.|..++||.+.|++..-+..-++.|-..|-|...=-. |-| ++.
T Consensus 21 ~~~vss~~IA~~~~i~~~~l~kil~~L~~aGlv~S~rG~-GG~-~L~ 65 (138)
T d1ylfa1 21 SSLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRGP-GGA-GLL 65 (138)
T ss_dssp GGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC----CCE-EES
T ss_pred CCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeecCC-CCc-eec
Confidence 457899999999999999999999999999999988774 777 465
No 143
>d1jboa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Synechococcus elongatus [TaxId: 32046]}
Probab=21.74 E-value=10 Score=29.43 Aligned_cols=40 Identities=28% Similarity=0.550 Sum_probs=29.3
Q ss_pred eeCCCceEEEcHHHHHHHHHHHHhc-CCccH-HHHHhhcccccc
Q 025511 190 MDDRGKYIYISQAEMKAVADYIKRQ-GRVSI-SHLASKSNQFID 231 (251)
Q Consensus 190 iDDRGKFIYIS~EEm~aVA~fI~qr-GRVSi-sELa~~sN~lI~ 231 (251)
-|++|+| +|+.||+.+..|++.- =|+++ .-|..+...+|+
T Consensus 12 AD~~gRy--ls~~EL~~l~~y~~~~~~Rl~aa~~L~~na~~IV~ 53 (162)
T d1jboa_ 12 ADTQGRF--LSNTELQAVDGRFKRAVASMEAARALTNNAQSLID 53 (162)
T ss_dssp HHHTTCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHhcCCC--CCHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHHHH
Confidence 3677886 7999999999999875 46665 456666666654
No 144
>d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Probab=21.61 E-value=24 Score=27.60 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=30.6
Q ss_pred hHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHH
Q 025511 159 LEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVAD 209 (251)
Q Consensus 159 LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~ 209 (251)
-+-||..||++. +.++++ ...+. =+++|-+|.++++.++++..
T Consensus 153 ~evLa~aF~v~~-e~~~kl---~~~~~----~q~~g~Iv~~~~eq~~~ls~ 195 (200)
T d2phla1 153 KHILEASFNSKF-EEINRV---LFEEE----GQQEGVIVNIDSEQIKELSK 195 (200)
T ss_dssp HHHHHHHHTSCH-HHHHHH---HTCST----TCBSSSEEECCTTTHHHHHH
T ss_pred HHHHHHHcCCCH-HHHHHH---Hhccc----cccCCceEEcCHHHHHHhhc
Confidence 566999999966 455554 22111 14699999999999998864
No 145
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=21.57 E-value=22 Score=22.58 Aligned_cols=32 Identities=9% Similarity=0.228 Sum_probs=20.7
Q ss_pred ceeeeCCCceEEEcHHHHHHHHHHHHhcCCccHHHHHhhc
Q 025511 187 SGVMDDRGKYIYISQAEMKAVADYIKRQGRVSISHLASKS 226 (251)
Q Consensus 187 TGViDDRGKFIYIS~EEm~aVA~fI~qrGRVSisELa~~s 226 (251)
.=++|.+|+++|+++.=. +--|. +..|+...+
T Consensus 14 i~~~d~~g~i~~~N~~~~-------~l~Gy-~~~e~~g~~ 45 (113)
T d1v9ya_ 14 AVLINENDEVMFFNPAAE-------KLWGY-KREEVIGNN 45 (113)
T ss_dssp EEEECTTSBEEEECHHHH-------HHHSC-CGGGTTTSB
T ss_pred EEEEeCCCCEEEEchhHh-------hhhcc-chhhhcCcc
Confidence 346899999999998422 22254 556666443
No 146
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=21.47 E-value=20 Score=27.43 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=15.0
Q ss_pred hHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceE
Q 025511 161 DLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYI 197 (251)
Q Consensus 161 DLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFI 197 (251)
++|.++||. +.-++|+.|+|.
T Consensus 128 ~~~~k~gl~----------------i~~~Vd~~G~~~ 148 (179)
T d1udza_ 128 ETARVYGLP----------------LLKTVDEEGKLL 148 (179)
T ss_dssp HHHHHTTCC----------------CCCCBCTTSBBC
T ss_pred HHHHhcCCC----------------ccccccCcceec
Confidence 477777875 445678889884
No 147
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=21.40 E-value=45 Score=23.00 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=34.6
Q ss_pred HHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCce
Q 025511 149 EYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKY 196 (251)
Q Consensus 149 ~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKF 196 (251)
+.+. ..-..+++||...|+...-+..-+.-|-+.|-+.-.=|++|.|
T Consensus 34 d~L~-~gp~t~~eLA~~~g~~~~~l~rLlr~L~a~gll~~~~d~~~~~ 80 (92)
T d1qzza1 34 DHLL-AGADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGEKQGRPL 80 (92)
T ss_dssp HHHH-TTCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCCC-CCCC
T ss_pred HHHh-CCCCCHHHHHHHHCcCchHHHHHHHHHHHCCCeeeecCCCcee
Confidence 3454 4568899999999998877777777888888777655666654
No 148
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=21.10 E-value=64 Score=19.98 Aligned_cols=59 Identities=12% Similarity=0.079 Sum_probs=40.7
Q ss_pred HHHHHHHHhcCccchHhHHhHcCCChHHHHHHHHHHHhcCCcceeeeCCCceEEEcHHHHHHHHHHHHhcCCccHHHHH
Q 025511 145 ADFVEYIKKHKCIPLEDLAAEFKLRTQECINRITSLENMGRLSGVMDDRGKYIYISQAEMKAVADYIKRQGRVSISHLA 223 (251)
Q Consensus 145 ~~FI~YIK~~KVV~LEDLAa~FgLrTqdvI~RIq~Lea~G~LTGViDDRGKFIYIS~EEm~aVA~fI~qrGRVSisELa 223 (251)
..-|..+...+=....+||...|++. ..+.++.. |+ -.++.+.+..+|++.. ||+.+|.
T Consensus 5 g~rik~~R~~~g~tq~~lA~~~gvs~-~~i~~~e~--------------g~-~~p~~~~l~~ia~~l~----v~~~~Ll 63 (66)
T d2r1jl1 5 GERIRARRKKLKIRQAALGKMVGVSN-VAISQWER--------------SE-TEPNGENLLALSKALQ----CSPDYLL 63 (66)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHTSCH-HHHHHHHT--------------TS-SCCBHHHHHHHHHHTT----SCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHCCCH-HHHHHHHc--------------CC-CCCCHHHHHHHHHHhC----CCHHHHh
Confidence 34445555555568899999999964 55555542 44 2479999999999863 7877775
No 149
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=20.46 E-value=89 Score=26.63 Aligned_cols=55 Identities=11% Similarity=0.136 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcCccchHhHHhHcCCChHH----HHHHHHHHHhcCCcceeeeCCCceEEEcHH
Q 025511 144 LADFVEYIKKHKCIPLEDLAAEFKLRTQE----CINRITSLENMGRLSGVMDDRGKYIYISQA 202 (251)
Q Consensus 144 L~~FI~YIK~~KVV~LEDLAa~FgLrTqd----vI~RIq~Lea~G~LTGViDDRGKFIYIS~E 202 (251)
...+|.-+....-|.+.++...||+...+ .++++.+|+++|.|+ ..|..|.+|+.
T Consensus 367 ~~~vi~~L~~~~~ld~~~~~~~fg~~~~~~f~~~~~~L~~l~~~GLv~----~~~~~l~lT~~ 425 (441)
T d1olta_ 367 RRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVD----VDEKGIQVTAK 425 (441)
T ss_dssp HHHHHHHHHHHSEEEHHHHHHHTTCCHHHHTHHHHHHHHHHHHTTSEE----ECSSEEEECTT
T ss_pred HHHHHHHHHHhCCcCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE----EECCEEEECHh
Confidence 34555566666778889999999998754 557899999998865 23445778865
No 150
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=20.46 E-value=27 Score=21.59 Aligned_cols=6 Identities=100% Similarity=1.298 Sum_probs=2.3
Q ss_pred HHHHHH
Q 025511 37 LLLILV 42 (251)
Q Consensus 37 ~~~~~~ 42 (251)
||+|+|
T Consensus 21 lLlifv 26 (37)
T d2axtl1 21 LLLILV 26 (37)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334433
No 151
>d2r8oa3 c.48.1.1 (A:528-663) Transketolase (TK), C-domain {Escherichia coli [TaxId: 562]}
Probab=20.41 E-value=37 Score=24.39 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=20.7
Q ss_pred chHhHHhHcCCChHHHHHHHHHH
Q 025511 158 PLEDLAAEFKLRTQECINRITSL 180 (251)
Q Consensus 158 ~LEDLAa~FgLrTqdvI~RIq~L 180 (251)
+-++|-.+|||+.+.++++|++|
T Consensus 113 ~~~~L~~~~Gl~~~~I~~~i~~~ 135 (136)
T d2r8oa3 113 PAELLFEEFGFTVDNVVAKAKEL 135 (136)
T ss_dssp CHHHHHHHTTCSHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCHHHHHHHHHhh
Confidence 45679999999999999999987
No 152
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=20.23 E-value=37 Score=23.17 Aligned_cols=14 Identities=7% Similarity=0.396 Sum_probs=8.2
Q ss_pred hHhHHhHcCCChHH
Q 025511 159 LEDLAAEFKLRTQE 172 (251)
Q Consensus 159 LEDLAa~FgLrTqd 172 (251)
.++|...|||+..+
T Consensus 10 ~~~l~~~~gLs~~~ 23 (109)
T d2d1ha1 10 KDEIRCCYKITDTD 23 (109)
T ss_dssp HHHHHHHHTCCHHH
T ss_pred HHHHHHhcCcCHHH
Confidence 45566667765444
Done!