Query 025512
Match_columns 251
No_of_seqs 323 out of 2447
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 06:36:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.7 1.2E-17 2.6E-22 125.2 9.7 109 138-248 85-194 (226)
2 KOG4412 26S proteasome regulat 99.7 9.4E-17 2E-21 120.4 10.0 97 151-248 65-161 (226)
3 PHA02791 ankyrin-like protein; 99.7 1.4E-15 2.9E-20 126.6 13.9 137 109-249 71-217 (284)
4 PF13637 Ank_4: Ankyrin repeat 99.7 1.7E-16 3.6E-21 99.0 6.5 54 193-246 1-54 (54)
5 PHA02795 ankyrin-like protein; 99.7 9.7E-16 2.1E-20 132.8 13.0 139 109-249 128-285 (437)
6 PF13857 Ank_5: Ankyrin repeat 99.7 8.8E-17 1.9E-21 100.9 4.8 51 183-233 6-56 (56)
7 KOG0502 Integral membrane anky 99.7 7.9E-16 1.7E-20 118.9 10.9 122 106-245 156-277 (296)
8 KOG0508 Ankyrin repeat protein 99.7 1.9E-16 4.2E-21 134.3 8.0 109 139-249 98-206 (615)
9 PHA02791 ankyrin-like protein; 99.7 2.2E-15 4.8E-20 125.4 14.1 105 140-248 76-182 (284)
10 KOG0509 Ankyrin repeat and DHH 99.6 1.2E-15 2.6E-20 133.9 10.5 167 76-248 50-234 (600)
11 PHA03100 ankyrin repeat protei 99.6 7E-15 1.5E-19 131.8 15.5 137 111-249 155-306 (480)
12 PHA02989 ankyrin repeat protei 99.6 5.4E-15 1.2E-19 133.1 14.7 137 110-249 158-312 (494)
13 PHA02743 Viral ankyrin protein 99.6 5.9E-15 1.3E-19 113.8 11.6 94 153-248 55-150 (166)
14 PHA02874 ankyrin repeat protei 99.6 9.6E-15 2.1E-19 129.4 14.5 137 108-249 77-213 (434)
15 PF12796 Ank_2: Ankyrin repeat 99.6 4.2E-15 9E-20 102.5 9.2 74 170-249 9-82 (89)
16 PHA02875 ankyrin repeat protei 99.6 1.5E-14 3.3E-19 127.3 14.9 165 80-249 12-191 (413)
17 KOG0509 Ankyrin repeat and DHH 99.6 1.7E-15 3.6E-20 133.0 8.6 151 80-247 42-199 (600)
18 PHA02736 Viral ankyrin protein 99.6 5.7E-15 1.2E-19 112.5 10.4 134 106-248 13-148 (154)
19 PHA03095 ankyrin-like protein; 99.6 1.7E-14 3.7E-19 129.0 14.2 108 139-249 203-313 (471)
20 PHA02917 ankyrin-like protein; 99.6 2.7E-14 5.9E-19 131.6 15.7 171 69-249 34-254 (661)
21 PHA02859 ankyrin repeat protei 99.6 3.7E-14 8.1E-19 113.4 13.8 108 139-248 67-181 (209)
22 KOG0512 Fetal globin-inducing 99.6 9.1E-15 2E-19 109.1 8.8 65 184-248 88-152 (228)
23 PHA02875 ankyrin repeat protei 99.6 4.1E-14 8.9E-19 124.6 14.5 109 139-249 116-225 (413)
24 PHA02878 ankyrin repeat protei 99.6 3.9E-14 8.4E-19 127.0 13.9 108 140-249 149-258 (477)
25 PHA02741 hypothetical protein; 99.6 2.5E-14 5.4E-19 110.7 11.0 95 152-248 57-154 (169)
26 KOG0508 Ankyrin repeat protein 99.6 9.6E-15 2.1E-19 124.1 9.2 139 108-249 93-238 (615)
27 PHA03100 ankyrin repeat protei 99.6 4.5E-14 9.9E-19 126.5 14.1 109 139-249 87-199 (480)
28 PHA02716 CPXV016; CPX019; EVM0 99.6 1.5E-14 3.3E-19 133.4 11.2 65 185-249 489-563 (764)
29 PHA02798 ankyrin-like protein; 99.6 6.5E-14 1.4E-18 125.9 14.8 108 139-249 200-314 (489)
30 PHA02946 ankyin-like protein; 99.6 2.7E-14 5.8E-19 126.6 12.1 74 172-248 189-265 (446)
31 PHA02874 ankyrin repeat protei 99.6 1.3E-13 2.8E-18 122.2 15.3 77 171-249 104-180 (434)
32 KOG0514 Ankyrin repeat protein 99.6 5.2E-14 1.1E-18 116.2 11.5 62 184-245 364-426 (452)
33 KOG4214 Myotrophin and similar 99.5 1.5E-14 3.3E-19 96.9 6.8 80 166-249 11-90 (117)
34 PHA02989 ankyrin repeat protei 99.5 1.1E-13 2.3E-18 124.7 13.6 167 80-249 13-208 (494)
35 PHA02798 ankyrin-like protein; 99.5 7.8E-14 1.7E-18 125.4 12.7 76 171-248 89-170 (489)
36 PHA02878 ankyrin repeat protei 99.5 7.1E-14 1.5E-18 125.3 12.2 105 140-248 183-289 (477)
37 KOG0514 Ankyrin repeat protein 99.5 4.9E-14 1.1E-18 116.4 10.0 109 139-250 282-397 (452)
38 KOG4177 Ankyrin [Cell wall/mem 99.5 4.3E-14 9.2E-19 133.4 9.9 139 108-248 483-628 (1143)
39 PHA02741 hypothetical protein; 99.5 1E-13 2.2E-18 107.3 10.5 97 152-248 18-120 (169)
40 PHA03095 ankyrin-like protein; 99.5 1.8E-13 4E-18 122.3 13.5 149 78-248 22-176 (471)
41 PLN03192 Voltage-dependent pot 99.5 2.3E-13 5E-18 129.2 14.2 138 108-249 534-678 (823)
42 KOG4177 Ankyrin [Cell wall/mem 99.5 6.5E-14 1.4E-18 132.2 8.9 109 139-249 488-596 (1143)
43 PHA02716 CPXV016; CPX019; EVM0 99.5 1.1E-13 2.4E-18 127.7 10.3 138 109-249 152-342 (764)
44 PHA02859 ankyrin repeat protei 99.5 1.2E-12 2.7E-17 104.6 13.9 106 141-249 37-148 (209)
45 PHA02946 ankyin-like protein; 99.5 5.4E-13 1.2E-17 118.3 12.5 104 141-247 55-161 (446)
46 KOG0510 Ankyrin repeat protein 99.5 5E-13 1.1E-17 120.3 12.2 108 139-249 287-400 (929)
47 PHA02884 ankyrin repeat protei 99.5 4.8E-13 1E-17 111.7 11.0 102 139-245 47-156 (300)
48 PHA02743 Viral ankyrin protein 99.5 2E-13 4.4E-18 105.2 7.9 75 171-247 37-115 (166)
49 KOG0510 Ankyrin repeat protein 99.5 3.4E-13 7.3E-18 121.4 10.0 62 186-247 266-327 (929)
50 PHA02884 ankyrin repeat protei 99.4 6.1E-13 1.3E-17 111.0 10.5 79 169-249 44-127 (300)
51 KOG0512 Fetal globin-inducing 99.4 3.3E-13 7.2E-18 100.8 7.7 90 155-249 97-187 (228)
52 KOG0505 Myosin phosphatase, re 99.4 8.3E-13 1.8E-17 114.0 10.3 65 185-249 190-254 (527)
53 PHA02876 ankyrin repeat protei 99.4 1.6E-12 3.4E-17 121.5 13.1 107 140-248 357-465 (682)
54 PHA02730 ankyrin-like protein; 99.4 8.3E-12 1.8E-16 113.6 16.9 77 171-249 442-521 (672)
55 PLN03192 Voltage-dependent pot 99.4 2.2E-12 4.8E-17 122.6 13.2 78 170-249 537-614 (823)
56 KOG0515 p53-interacting protei 99.4 8.2E-13 1.8E-17 113.7 8.7 66 184-249 574-639 (752)
57 PTZ00322 6-phosphofructo-2-kin 99.4 1.4E-12 3E-17 120.9 10.2 76 171-248 95-170 (664)
58 PHA02876 ankyrin repeat protei 99.4 6.8E-12 1.5E-16 117.3 14.4 107 140-248 323-431 (682)
59 PHA02917 ankyrin-like protein; 99.4 5.5E-12 1.2E-16 116.4 13.1 136 112-249 346-509 (661)
60 KOG0705 GTPase-activating prot 99.4 2.7E-12 5.8E-17 111.5 10.2 161 57-249 549-717 (749)
61 PHA02792 ankyrin-like protein; 99.4 3.1E-12 6.7E-17 115.3 10.6 137 111-249 320-476 (631)
62 KOG0195 Integrin-linked kinase 99.4 1.3E-12 2.8E-17 105.1 6.7 89 159-249 35-123 (448)
63 PHA02795 ankyrin-like protein; 99.4 9.7E-12 2.1E-16 108.1 12.2 108 139-249 132-244 (437)
64 PHA02736 Viral ankyrin protein 99.3 1.4E-12 3E-17 99.3 5.4 96 151-248 13-114 (154)
65 KOG0502 Integral membrane anky 99.3 2.4E-12 5.1E-17 99.8 4.5 65 184-248 151-215 (296)
66 TIGR00870 trp transient-recept 99.3 1.2E-10 2.6E-15 109.9 16.0 156 70-249 18-198 (743)
67 PHA02730 ankyrin-like protein; 99.2 8.8E-11 1.9E-15 107.0 12.5 106 140-247 22-137 (672)
68 KOG0515 p53-interacting protei 99.2 1.9E-10 4E-15 99.5 12.6 92 151-247 579-673 (752)
69 KOG0195 Integrin-linked kinase 99.2 2E-11 4.4E-16 98.3 5.9 101 107-235 42-142 (448)
70 PF13606 Ank_3: Ankyrin repeat 99.2 1.9E-11 4.2E-16 66.0 3.9 30 192-221 1-30 (30)
71 PF12796 Ank_2: Ankyrin repeat 99.2 2.2E-10 4.9E-15 78.7 9.9 79 139-223 11-89 (89)
72 PF00023 Ank: Ankyrin repeat H 99.2 5.1E-11 1.1E-15 66.1 4.4 33 192-224 1-33 (33)
73 KOG0505 Myosin phosphatase, re 99.2 1.7E-10 3.7E-15 99.9 9.4 93 141-235 181-273 (527)
74 cd00204 ANK ankyrin repeats; 99.2 7E-10 1.5E-14 80.2 11.4 74 171-246 53-126 (126)
75 PHA02792 ankyrin-like protein; 99.1 1.7E-10 3.8E-15 104.1 9.4 141 108-249 81-240 (631)
76 KOG0507 CASK-interacting adapt 99.1 1E-10 2.2E-15 105.0 6.7 127 106-249 45-171 (854)
77 KOG0506 Glutaminase (contains 99.1 6.1E-11 1.3E-15 101.1 5.1 84 163-249 512-596 (622)
78 COG0666 Arp FOG: Ankyrin repea 99.1 2.9E-10 6.3E-15 90.8 8.5 108 141-248 89-202 (235)
79 COG0666 Arp FOG: Ankyrin repea 99.1 4.8E-10 1.1E-14 89.5 9.2 74 173-248 88-169 (235)
80 KOG1710 MYND Zn-finger and ank 99.1 5.8E-10 1.3E-14 89.9 9.3 106 141-248 28-134 (396)
81 KOG4214 Myotrophin and similar 99.1 1.9E-09 4.1E-14 72.6 9.9 69 163-233 39-107 (117)
82 cd00204 ANK ankyrin repeats; 99.0 1.8E-09 3.9E-14 78.0 9.3 89 155-248 7-95 (126)
83 KOG0818 GTPase-activating prot 99.0 9.2E-10 2E-14 94.5 8.2 83 164-249 140-223 (669)
84 KOG1710 MYND Zn-finger and ank 99.0 1.3E-09 2.9E-14 87.8 7.9 65 184-248 36-101 (396)
85 KOG0522 Ankyrin repeat protein 99.0 1.7E-09 3.6E-14 93.8 7.8 66 183-248 45-110 (560)
86 KOG3676 Ca2+-permeable cation 98.9 2.6E-09 5.7E-14 96.9 8.1 133 110-248 195-330 (782)
87 KOG0507 CASK-interacting adapt 98.9 8.6E-10 1.9E-14 99.1 4.3 89 156-249 50-138 (854)
88 KOG3676 Ca2+-permeable cation 98.9 7.5E-09 1.6E-13 94.0 9.7 97 148-249 177-296 (782)
89 TIGR00870 trp transient-recept 98.9 3.1E-09 6.8E-14 100.4 7.5 88 155-247 175-278 (743)
90 KOG2384 Major histocompatibili 98.8 5.8E-09 1.2E-13 79.3 5.9 65 184-248 3-68 (223)
91 KOG0783 Uncharacterized conser 98.8 1.3E-09 2.7E-14 98.9 2.2 62 187-248 46-108 (1267)
92 PF13857 Ank_5: Ankyrin repeat 98.8 4E-09 8.7E-14 65.9 3.3 37 212-248 1-38 (56)
93 PF13637 Ank_4: Ankyrin repeat 98.7 2.9E-08 6.2E-13 61.5 5.4 44 168-213 11-54 (54)
94 KOG0782 Predicted diacylglycer 98.7 3.8E-08 8.2E-13 86.1 7.3 91 159-249 900-990 (1004)
95 KOG0521 Putative GTPase activa 98.7 1.4E-08 3E-13 94.7 4.3 59 191-249 654-712 (785)
96 PTZ00322 6-phosphofructo-2-kin 98.6 1.2E-07 2.5E-12 88.4 8.5 94 139-234 96-196 (664)
97 KOG0783 Uncharacterized conser 98.6 3E-08 6.6E-13 90.2 3.5 82 152-235 46-128 (1267)
98 PF13606 Ank_3: Ankyrin repeat 98.4 2.6E-07 5.5E-12 49.7 3.4 25 225-249 1-25 (30)
99 KOG4369 RTK signaling protein 98.3 5.7E-07 1.2E-11 84.5 4.8 110 139-248 838-948 (2131)
100 KOG4369 RTK signaling protein 98.3 6.1E-07 1.3E-11 84.3 4.0 64 184-247 781-845 (2131)
101 KOG0511 Ankyrin repeat protein 98.2 2.9E-06 6.2E-11 71.3 6.2 52 197-248 40-91 (516)
102 PF00023 Ank: Ankyrin repeat H 98.2 1.7E-06 3.7E-11 47.6 3.4 25 225-249 1-25 (33)
103 KOG0521 Putative GTPase activa 97.9 1.2E-05 2.5E-10 75.5 4.8 77 168-246 666-742 (785)
104 KOG0782 Predicted diacylglycer 97.7 7.4E-05 1.6E-09 66.1 6.2 79 167-248 876-956 (1004)
105 smart00248 ANK ankyrin repeats 97.7 6.5E-05 1.4E-09 38.8 3.9 29 192-220 1-29 (30)
106 KOG0520 Uncharacterized conser 97.6 3.2E-05 7E-10 72.7 2.1 64 184-247 632-701 (975)
107 KOG0506 Glutaminase (contains 97.6 5.1E-05 1.1E-09 65.7 3.1 58 191-248 504-561 (622)
108 KOG0818 GTPase-activating prot 97.6 0.00018 3.9E-09 62.6 6.2 62 187-248 121-189 (669)
109 KOG2505 Ankyrin repeat protein 97.6 0.00029 6.4E-09 61.4 7.4 44 191-234 428-471 (591)
110 KOG0520 Uncharacterized conser 97.5 8E-05 1.7E-09 70.1 3.0 85 160-247 576-662 (975)
111 KOG0511 Ankyrin repeat protein 97.3 0.00089 1.9E-08 56.7 6.8 58 171-230 49-106 (516)
112 KOG3609 Receptor-activated Ca2 96.6 0.016 3.4E-07 54.1 9.5 101 139-248 39-153 (822)
113 smart00248 ANK ankyrin repeats 96.5 0.0042 9.1E-08 31.4 3.3 25 225-249 1-25 (30)
114 KOG0705 GTPase-activating prot 96.5 0.005 1.1E-07 55.0 5.5 61 155-220 661-721 (749)
115 KOG0522 Ankyrin repeat protein 96.4 0.0039 8.5E-08 55.0 4.3 54 195-248 22-77 (560)
116 KOG3609 Receptor-activated Ca2 96.2 0.0079 1.7E-07 56.1 5.1 61 183-250 52-112 (822)
117 KOG2384 Major histocompatibili 94.2 0.15 3.2E-06 39.6 5.6 72 151-223 5-76 (223)
118 PF11929 DUF3447: Domain of un 90.2 0.57 1.2E-05 30.8 4.0 46 196-248 9-54 (76)
119 PF06128 Shigella_OspC: Shigel 88.2 1.5 3.2E-05 35.2 5.6 45 205-249 229-277 (284)
120 KOG2505 Ankyrin repeat protein 84.3 1.6 3.5E-05 38.9 4.3 43 206-248 404-452 (591)
121 PF03158 DUF249: Multigene fam 84.2 2.4 5.1E-05 32.9 4.7 47 196-248 146-192 (192)
122 PF06128 Shigella_OspC: Shigel 83.3 2.8 6.1E-05 33.7 4.9 56 162-218 221-279 (284)
123 smart00105 ArfGap Putative GTP 56.5 12 0.00027 26.5 2.7 34 55-89 37-73 (112)
124 smart00727 STI1 Heat shock cha 44.7 17 0.00037 20.3 1.6 20 63-82 6-25 (41)
125 PF01412 ArfGap: Putative GTPa 43.3 14 0.00031 26.3 1.4 33 56-89 48-83 (116)
126 KOG3836 HLH transcription fact 40.5 6.2 0.00013 36.2 -1.1 48 200-247 403-450 (605)
127 KOG2857 Predicted MYND Zn-fing 38.6 1.2E+02 0.0025 22.6 5.3 45 75-134 91-135 (157)
128 KOG0703 Predicted GTPase-activ 38.1 22 0.00048 29.7 1.9 38 51-89 55-95 (287)
129 PF07218 RAP1: Rhoptry-associa 32.2 77 0.0017 29.2 4.3 12 1-13 123-134 (782)
130 PF12200 DUF3597: Domain of un 30.3 69 0.0015 23.3 3.1 37 53-89 46-91 (127)
131 COG5347 GTPase-activating prot 28.2 45 0.00099 28.5 2.2 37 52-89 51-90 (319)
132 PF02026 RyR: RyR domain; Int 21.8 96 0.0021 21.2 2.5 31 50-83 1-31 (94)
133 KOG4591 Uncharacterized conser 20.1 89 0.0019 24.8 2.2 45 192-236 221-270 (280)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.2e-17 Score=125.24 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=93.9
Q ss_pred ChHHHHHHHh-cCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC
Q 025512 138 DPSMSHMMES-LTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG 216 (251)
Q Consensus 138 ~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G 216 (251)
+..+..++.. +.+++.....+.+..+++......++..+|+.+| +.++.+|..|.||||.|+.-|.++++++|+..|
T Consensus 85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~g--a~i~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKG--ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcC--CCCcccccccCchhHHHHhccchhhHHHHHhcC
Confidence 3566666666 7788887777777778888888888888889888 678888999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 217 AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+.+|.+|..|+||||+|...|+.++..+|+++
T Consensus 163 a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~ 194 (226)
T KOG4412|consen 163 APLNTQDKYGFTPLHHALAEGHPDVAVLLVRA 194 (226)
T ss_pred CCCCcccccCccHHHHHHhccCchHHHHHHHh
Confidence 99999999999999999888899998888875
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=9.4e-17 Score=120.43 Aligned_cols=97 Identities=29% Similarity=0.412 Sum_probs=80.1
Q ss_pred CCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 025512 151 PTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPI 230 (251)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 230 (251)
++.++..+....+++...+..++++.|+... .+++|..+..|+|+||||+..|+.+|+++|+++|+.++++|..|.|||
T Consensus 65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~-~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtpl 143 (226)
T KOG4412|consen 65 PDDKDDAGWTPLHIAASNGNDEVVKELLNRS-GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPL 143 (226)
T ss_pred CCCccccCCchhhhhhhcCcHHHHHHHhcCC-CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchh
Confidence 3444444444444444444667777777763 378999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhC
Q 025512 231 DVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 231 ~~A~~~g~~~iv~~Ll~~ 248 (251)
|-|+..|..+++++|+..
T Consensus 144 HRAAavGklkvie~Li~~ 161 (226)
T KOG4412|consen 144 HRAAAVGKLKVIEYLISQ 161 (226)
T ss_pred HHHHhccchhhHHHHHhc
Confidence 999999999999999874
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.67 E-value=1.4e-15 Score=126.64 Aligned_cols=137 Identities=14% Similarity=0.022 Sum_probs=92.4
Q ss_pred hchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCccCcHHH-HHHHHhcCCCcHHHHHHHHhc
Q 025512 109 TQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKKDQIEE-RMAKIKEDPSLKPILDEIESG 180 (251)
Q Consensus 109 ~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~L~~~ 180 (251)
.++.+++..|+..++.+...+..|...+ +...+..+++.+++.+..+..+. ....++...+..+++++|+..
T Consensus 71 ~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~ 150 (284)
T PHA02791 71 LEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 150 (284)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc
Confidence 3455555555555544333322222111 11456667777777765554331 222223333445667777765
Q ss_pred CCCccccccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHhCC
Q 025512 181 GPSAMMKYWN-DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTP-IDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 181 ~~~~~v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~Tp-L~~A~~~g~~~iv~~Ll~~~ 249 (251)
+.. . .| ..|+||||+|+..|+.++|++|+++||+++.+|..|+|| ||+|+..|+.++|++|+++.
T Consensus 151 ~~~-~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G 217 (284)
T PHA02791 151 IPS-T---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD 217 (284)
T ss_pred CCc-c---cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC
Confidence 421 1 22 358999999999999999999999999999999999987 99999999999999999864
No 4
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.67 E-value=1.7e-16 Score=99.04 Aligned_cols=54 Identities=44% Similarity=0.649 Sum_probs=46.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 193 DNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 193 G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999999999999999999986
No 5
>PHA02795 ankyrin-like protein; Provisional
Probab=99.67 E-value=9.7e-16 Score=132.85 Aligned_cols=139 Identities=16% Similarity=0.137 Sum_probs=103.0
Q ss_pred hchHHHHHHHHcCCcchHHHHH---hhhhc-cC-ChHHHHHHHhcCCCCccCcHH------HHHHHHhcCCCcHHHHHHH
Q 025512 109 TQYYSTMQQVMQNPQFMTMAER---LGNAL-MQ-DPSMSHMMESLTNPTKKDQIE------ERMAKIKEDPSLKPILDEI 177 (251)
Q Consensus 109 ~g~~~l~~~l~~~~~~~~~a~~---~~~~l-l~-~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~L 177 (251)
.++.++++.|+.+|++++.... ..... .. ...+..++..+++........ .............+++++|
T Consensus 128 ~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~L 207 (437)
T PHA02795 128 YVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLC 207 (437)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHH
Confidence 5788999999999998754211 11111 11 234555566665433222111 1112223345678899999
Q ss_pred HhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--------CHHHHHHHHhCC
Q 025512 178 ESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS--------QHDVLKLLEKDA 249 (251)
Q Consensus 178 ~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g--------~~~iv~~Ll~~~ 249 (251)
+..| +++|.+|..|+||||+|+..|+.+++++|+++||+++.+|..|+||||+|+..| +.+++++|++++
T Consensus 208 Is~G--ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g 285 (437)
T PHA02795 208 IPYI--EDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP 285 (437)
T ss_pred HhCc--CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC
Confidence 9987 788999999999999999999999999999999999999999999999999988 468999999864
No 6
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.67 E-value=8.8e-17 Score=100.92 Aligned_cols=51 Identities=43% Similarity=0.637 Sum_probs=34.0
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 233 (251)
..+++.+|..|.||||+||..|+.++|++|++.|+|++.+|..|+||||+|
T Consensus 6 ~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 468899999999999999999999999999999999999999999999997
No 7
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.66 E-value=7.9e-16 Score=118.90 Aligned_cols=122 Identities=18% Similarity=0.269 Sum_probs=110.5
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcc
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAM 185 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~ 185 (251)
.|+.|++.+|++... |.. |.+..+|+.++++..-+.+.+....++..+++..++++|+..+ .+
T Consensus 156 ~De~GfTpLiWAaa~-----------G~i----~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~--vd 218 (296)
T KOG0502|consen 156 CDEFGFTPLIWAAAK-----------GHI----PVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTRE--VD 218 (296)
T ss_pred ccccCchHhHHHHhc-----------Cch----HHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcC--CC
Confidence 788999999887555 566 8899999999999999999999889999999999999999987 67
Q ss_pred ccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 186 MKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 186 v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
||..|-+|-|||-+|++.+|.+||+.||..|||++..+..|++++.+|+..|+. +|+..
T Consensus 219 VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqv 277 (296)
T KOG0502|consen 219 VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQV 277 (296)
T ss_pred cceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHH
Confidence 888999999999999999999999999999999999999999999999999998 55433
No 8
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.66 E-value=1.9e-16 Score=134.30 Aligned_cols=109 Identities=18% Similarity=0.185 Sum_probs=87.0
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..++.+++.+++.|.......+....++..+..+++++|++++ ++.+..|..|+|.||+||+.||.+|+++|++.|||
T Consensus 98 ~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~g--ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gAD 175 (615)
T KOG0508|consen 98 EVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHG--ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGAD 175 (615)
T ss_pred HHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcC--CCCcccccCCCeeEEeeeccCchHHHHHHHHhCCC
Confidence 4666777888877776655555444555555677777777776 66777888899999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|.++..|+|+||.|++.|+.+|+++|+++.
T Consensus 176 vn~ks~kGNTALH~caEsG~vdivq~Ll~~g 206 (615)
T KOG0508|consen 176 VNAKSYKGNTALHDCAESGSVDIVQLLLKHG 206 (615)
T ss_pred cchhcccCchHHHhhhhcccHHHHHHHHhCC
Confidence 9999999999999999999999999888864
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.66 E-value=2.2e-15 Score=125.38 Aligned_cols=105 Identities=11% Similarity=0.021 Sum_probs=54.5
Q ss_pred HHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCc-hHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 140 SMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDN-TALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~-TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
.+..++..+++++..+..+.+...++...+..+++++|+..+ .+++.++..|+ ||||+|+..|+.++|++|+++|.+
T Consensus 76 iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g--adin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~ 153 (284)
T PHA02791 76 IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN--WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 153 (284)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc
Confidence 444445555555444333333333333333445555555554 34455555553 566666666666666666665543
Q ss_pred CCCCC-CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 219 VTLQN-MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
. .| ..|+||||+|+..|+.+++++|+++
T Consensus 154 ~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~ 182 (284)
T PHA02791 154 T--FDLAILLSCIHITIKNGHVDMMILLLDY 182 (284)
T ss_pred c--cccccCccHHHHHHHcCCHHHHHHHHHC
Confidence 2 12 2356666666666666666666654
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.64 E-value=1.2e-15 Score=133.89 Aligned_cols=167 Identities=18% Similarity=0.217 Sum_probs=121.4
Q ss_pred HHhcCchHHHHHHHHHh-hhcCCCCC-CCCCc---cchhchHHHHHHHHcCCcchHHH------------HHhhhhccCC
Q 025512 76 QIAKDPAFNSMAEQLQK-TLHGANAE-ESIPQ---FDTTQYYSTMQQVMQNPQFMTMA------------ERLGNALMQD 138 (251)
Q Consensus 76 ~i~~n~~f~~i~~~l~~-~~~~~~~~-~~~~~---~~~~g~~~l~~~l~~~~~~~~~a------------~~~~~~ll~~ 138 (251)
...++..+..+.+++.. +.+...++ .+.-- ...++..++++.|++++++++.. .+.|..
T Consensus 50 ~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~---- 125 (600)
T KOG0509|consen 50 KATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHI---- 125 (600)
T ss_pred hHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcH----
Confidence 34557788888888777 54421111 11111 11344556677777777665533 222333
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.++++...+..+....+++...+...++.+|+..+ .++|.+|.+|+||||+|+.+|+...+.+||+.|+.
T Consensus 126 ~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~--~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~ 203 (600)
T KOG0509|consen 126 SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG--ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGAS 203 (600)
T ss_pred HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc--ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccc
Confidence 6788889999999988888877666666666666666677766 78889999999999999999998889999999999
Q ss_pred CCCCC-CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 219 VTLQN-MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+...| .+|.||||||+..|+..++.+|++.
T Consensus 204 ~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g 234 (600)
T KOG0509|consen 204 LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEG 234 (600)
T ss_pred ccccccccCCchHHHHHhcCCcceEehhhhc
Confidence 99988 8999999999999999998866654
No 11
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.63 E-value=7e-15 Score=131.78 Aligned_cols=137 Identities=21% Similarity=0.247 Sum_probs=102.4
Q ss_pred hHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCccCcHH------HHHHHHhcCCCc--HHHHH
Q 025512 111 YYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKKDQIE------ERMAKIKEDPSL--KPILD 175 (251)
Q Consensus 111 ~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~l~ 175 (251)
..++++.|++.++.+...+..|...+ +...+..+++.+++++..+..+ ......+..... .++++
T Consensus 155 ~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~ 234 (480)
T PHA03100 155 DLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVN 234 (480)
T ss_pred hHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHH
Confidence 56667777776665544333322211 1246677788888877654332 222222222333 77888
Q ss_pred HHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 176 EIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 176 ~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+..| .+++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++.+++++|+++.
T Consensus 235 ~Ll~~g--~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g 306 (480)
T PHA03100 235 YLLSYG--VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNG 306 (480)
T ss_pred HHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcC
Confidence 888887 678889999999999999999999999999999999999999999999999999999999999864
No 12
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.63 E-value=5.4e-15 Score=133.05 Aligned_cols=137 Identities=14% Similarity=0.075 Sum_probs=97.8
Q ss_pred chHHHHHHHHcCCcchHH-HHHhhhhcc-----------CChHHHHHHHhcCCCCccCcHHHHHHH--Hhc----CCCcH
Q 025512 110 QYYSTMQQVMQNPQFMTM-AERLGNALM-----------QDPSMSHMMESLTNPTKKDQIEERMAK--IKE----DPSLK 171 (251)
Q Consensus 110 g~~~l~~~l~~~~~~~~~-a~~~~~~ll-----------~~~~~~~ll~~~~~~~~~~~~~~~~~~--~~~----~~~~~ 171 (251)
++.++++.|++.++.+.. .+..+...+ .-..+..+++.+++++..+........ ... .....
T Consensus 158 ~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~ 237 (494)
T PHA02989 158 VKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEF 237 (494)
T ss_pred CCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccch
Confidence 355666677777765543 222222211 123566677788877765532222111 111 12345
Q ss_pred HHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 172 PILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 172 ~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.++.+|..+ +++|.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.++|++|++..
T Consensus 238 ~il~~l~~~---advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~ 312 (494)
T PHA02989 238 KVLNFILKY---IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLK 312 (494)
T ss_pred HHHHHHHhC---CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 666667665 678999999999999999999999999999999999999999999999999999999999998753
No 13
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.62 E-value=5.9e-15 Score=113.82 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=81.4
Q ss_pred ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccC-CCCchHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHH
Q 025512 153 KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWN-DKDNTALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKTPI 230 (251)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL 230 (251)
..+....+.++.....+...++++|+..+ .+++.+| ..|+||||+|+..|+.+++++|+. .|++++.+|..|+|||
T Consensus 55 ~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G--adin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL 132 (166)
T PHA02743 55 HHGRQCTHMVAWYDRANAVMKIELLVNMG--ADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAY 132 (166)
T ss_pred CCCCcHHHHHHHhCccCHHHHHHHHHHcC--CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHH
Confidence 34455667777666667777788888887 6788888 589999999999999999999995 7999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhC
Q 025512 231 DVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 231 ~~A~~~g~~~iv~~Ll~~ 248 (251)
|+|+..++.+++++|+++
T Consensus 133 ~~A~~~~~~~iv~~Ll~~ 150 (166)
T PHA02743 133 HIAYKMRDRRMMEILRAN 150 (166)
T ss_pred HHHHHcCCHHHHHHHHHc
Confidence 999999999999999975
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.62 E-value=9.6e-15 Score=129.39 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=103.0
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcccc
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMK 187 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~ 187 (251)
..++.++++.|+++++....... .......+..+++.+.+++..+..+.+...++...+..+++++|+..| .+++
T Consensus 77 ~~~~~~iv~~Ll~~g~~~~~~~~---~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g--ad~n 151 (434)
T PHA02874 77 KIGAHDIIKLLIDNGVDTSILPI---PCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYG--ADVN 151 (434)
T ss_pred HcCCHHHHHHHHHCCCCCCcchh---ccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCC--CCCC
Confidence 45666777777776654322110 111224667777888877766554444444444445567777788876 6678
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 188 YWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 188 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+|..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++.
T Consensus 152 ~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g 213 (434)
T PHA02874 152 IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHG 213 (434)
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 88999999999999999999999999999999999999999999999999999999999764
No 15
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.61 E-value=4.2e-15 Score=102.55 Aligned_cols=74 Identities=41% Similarity=0.518 Sum_probs=64.1
Q ss_pred cHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 170 LKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 170 ~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
..+++++|+..+ .+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 9 ~~~~~~~ll~~~--~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 82 (89)
T PF12796_consen 9 NLEILKFLLEKG--ADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHG 82 (89)
T ss_dssp THHHHHHHHHTT--STTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTT
T ss_pred CHHHHHHHHHCc--CCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 456667777765 33433 899999999999999999999999999999999999999999999999999999873
No 16
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.61 E-value=1.5e-14 Score=127.27 Aligned_cols=165 Identities=14% Similarity=0.110 Sum_probs=109.7
Q ss_pred CchHHHHHHHHHhhhcCCCC-CCCCCc---cchhchHHHHHHHHcCCcchHHHHHhhhhc-------cCChHHHHHHHhc
Q 025512 80 DPAFNSMAEQLQKTLHGANA-EESIPQ---FDTTQYYSTMQQVMQNPQFMTMAERLGNAL-------MQDPSMSHMMESL 148 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~-~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~~~~~l-------l~~~~~~~ll~~~ 148 (251)
...+..+..++..|++.... ..+... ....+..++++.|+..++........+... .....+..+++.+
T Consensus 12 ~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~ 91 (413)
T PHA02875 12 FGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLG 91 (413)
T ss_pred hCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcC
Confidence 34566666777777662100 011111 113345566666766665433221111100 0114566667666
Q ss_pred CCCC----ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 025512 149 TNPT----KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM 224 (251)
Q Consensus 149 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~ 224 (251)
.... ..+....+.++..+ ..+++++|+..| ++++..+..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 92 ~~~~~~~~~~g~tpL~~A~~~~---~~~iv~~Ll~~g--ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~ 166 (413)
T PHA02875 92 KFADDVFYKDGMTPLHLATILK---KLDIMKLLIARG--ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDC 166 (413)
T ss_pred CcccccccCCCCCHHHHHHHhC---CHHHHHHHHhCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Confidence 5432 23445555555544 457777778776 66788899999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.|+||||+|+..|+.+++++|+++.
T Consensus 167 ~g~TpL~~A~~~g~~eiv~~Ll~~g 191 (413)
T PHA02875 167 CGCTPLIIAMAKGDIAICKMLLDSG 191 (413)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 9999999999999999999999864
No 17
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.61 E-value=1.7e-15 Score=133.02 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=112.3
Q ss_pred CchHHHHHHHHHhhhcCC-----CC-CCCCCccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCc
Q 025512 80 DPAFNSMAEQLQKTLHGA-----NA-EESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTK 153 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~-----~~-~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~ 153 (251)
++.+..+.+..|.|--.. .+ ..+.++.|++|++.++.+.++|.. ..++.+++.+++++.
T Consensus 42 d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl---------------~v~r~li~~gadvn~ 106 (600)
T KOG0509|consen 42 DSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRL---------------DVARYLISHGADVNA 106 (600)
T ss_pred chhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcH---------------HHHHHHHHcCCCccc
Confidence 555555555544332211 22 344455778888888888887444 566777888888887
Q ss_pred cC-cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 025512 154 KD-QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDV 232 (251)
Q Consensus 154 ~~-~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 232 (251)
.+ ....+..+.+...+...++++|+++| ++++++|.+|.||||+|++.||.-+|-+||.+|+|++.+|.+|+|||||
T Consensus 107 ~gG~l~stPLHWAar~G~~~vv~lLlqhG--Adpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmw 184 (600)
T KOG0509|consen 107 IGGVLGSTPLHWAARNGHISVVDLLLQHG--ADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMW 184 (600)
T ss_pred cCCCCCCCcchHHHHcCcHHHHHHHHHcC--CCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHH
Confidence 65 44444444555556677777888887 7788899999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHh
Q 025512 233 AKLNSQHDVLKLLEK 247 (251)
Q Consensus 233 A~~~g~~~iv~~Ll~ 247 (251)
|+..|+...+++|++
T Consensus 185 Aaykg~~~~v~~LL~ 199 (600)
T KOG0509|consen 185 AAYKGFALFVRRLLK 199 (600)
T ss_pred HHHhcccHHHHHHHH
Confidence 999999886777765
No 18
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.61 E-value=5.7e-15 Score=112.52 Aligned_cols=134 Identities=15% Similarity=0.056 Sum_probs=93.7
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcc
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAM 185 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~ 185 (251)
.+..|.+.++.+..... ........... . +.. ..++. ..+..+....++++.....+..+++++|+..| .+
T Consensus 13 ~d~~g~tpLh~A~~~g~-~~~l~~~~~~~-~-~~~-~~~~~---~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g--ad 83 (154)
T PHA02736 13 PDIEGENILHYLCRNGG-VTDLLAFKNAI-S-DEN-RYLVL---EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG--AD 83 (154)
T ss_pred cCCCCCCHHHHHHHhCC-HHHHHHHHHHh-c-chh-HHHHH---HhcCCCCEEEEeecccCchhHHHHHHHHHHcC--CC
Confidence 46678888888877643 11111111100 0 000 00000 12334445555555554444556777888877 67
Q ss_pred ccccC-CCCchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 186 MKYWN-DKDNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 186 v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++.++ ..|+||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 84 in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ 148 (154)
T PHA02736 84 INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK 148 (154)
T ss_pred ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 88887 4899999999999999999999984 999999999999999999999999999999875
No 19
>PHA03095 ankyrin-like protein; Provisional
Probab=99.60 E-value=1.7e-14 Score=128.98 Aligned_cols=108 Identities=17% Similarity=0.253 Sum_probs=85.8
Q ss_pred hHHHHHHHhcCCCCccCcHHH---HHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKDQIEE---RMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+..+. +.++..... ...++..|+..+ .++|.+|..|+||||+|+..|+.++|++|+++
T Consensus 203 ~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~-~~~~v~~ll~~g--~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~ 279 (471)
T PHA03095 203 RIVRELIRAGCDPAATDMLGNTPLHSMATGSSC-KRSLVLPLLIAG--ISINARNRYGQTPLHYAAVFNNPRACRRLIAL 279 (471)
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc-hHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 356677788888877655444 333332221 123455566665 67899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|||++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 280 gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~ 313 (471)
T PHA03095 280 GADINAVSSDGNTPLSLMVRNNNGRAVRAALAKN 313 (471)
T ss_pred CCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999999999999999998753
No 20
>PHA02917 ankyrin-like protein; Provisional
Probab=99.60 E-value=2.7e-14 Score=131.60 Aligned_cols=171 Identities=16% Similarity=0.109 Sum_probs=118.7
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchH-----HH-HHhh---------
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMT-----MA-ERLG--------- 132 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~-----~a-~~~~--------- 132 (251)
..+..|...+.+...+.+..+|..|++ ++ .+..|.++++.+...+...+. .. ...+
T Consensus 34 t~Lh~a~~~~~~~~~~~v~~Ll~~ga~--------v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~ 105 (661)
T PHA02917 34 NALHAYLFNEHCNNVEVVKLLLDSGTN--------PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNI 105 (661)
T ss_pred cHHHHHHHhhhcCcHHHHHHHHHCCCC--------ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcch
Confidence 345666566655666777777888887 44 455666666666554432110 00 0000
Q ss_pred -----hhccCChHHHHHHHhcCCCCccCcHHHHHHH--HhcCCCcHHHHHHHHhcCCCccccccCC---CC---------
Q 025512 133 -----NALMQDPSMSHMMESLTNPTKKDQIEERMAK--IKEDPSLKPILDEIESGGPSAMMKYWND---KD--------- 193 (251)
Q Consensus 133 -----~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~L~~~~~~~~v~~~d~---~G--------- 193 (251)
..-.+...+..+++.+++++.++..+.+... +.......+++++|+..| ++++..|. .|
T Consensus 106 ~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~G--a~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 106 FSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENG--CSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred HHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcC--CCcccccccccccccccccccc
Confidence 0011225677789999999987766655443 334456788888888887 56665443 34
Q ss_pred --chHHHHHHH-----------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHhCC
Q 025512 194 --NTALHYAAG-----------YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQH--DVLKLLEKDA 249 (251)
Q Consensus 194 --~TpLh~Aa~-----------~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~--~iv~~Ll~~~ 249 (251)
+||||+|+. .++.++|++|+++|||++.+|..|+||||+|+..|+. +||++|++++
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~ 254 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGI 254 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCC
Confidence 599999986 4689999999999999999999999999999999985 7999998754
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.59 E-value=3.7e-14 Score=113.42 Aligned_cols=108 Identities=13% Similarity=0.143 Sum_probs=83.1
Q ss_pred hHHHHHHHhcCCCCccC----cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHH--cCCHHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKD----QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAG--YGRKECVALL 212 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~--~g~~~~v~~L 212 (251)
..+..+++.+++++..+ ....+.++........+++.+|+..| ++++.+|..|+||||+|+. .++.+++++|
T Consensus 67 eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g--adin~~d~~G~TpLh~a~~~~~~~~~iv~~L 144 (209)
T PHA02859 67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSG--SSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144 (209)
T ss_pred HHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 45666677777776543 33445444333334577888888876 6788899999999999875 4689999999
Q ss_pred HHCCCCCCCCCCCCCcHHHH-HHHcCCHHHHHHHHhC
Q 025512 213 LENGAAVTLQNMDGKTPIDV-AKLNSQHDVLKLLEKD 248 (251)
Q Consensus 213 l~~Gad~~~~d~~G~TpL~~-A~~~g~~~iv~~Ll~~ 248 (251)
+++|++++.+|..|.||||. |+..++.+++++|+++
T Consensus 145 i~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~ 181 (209)
T PHA02859 145 IDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSL 181 (209)
T ss_pred HHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHc
Confidence 99999999999999999995 5678899999999875
No 22
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.58 E-value=9.1e-15 Score=109.10 Aligned_cols=65 Identities=26% Similarity=0.262 Sum_probs=39.8
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.-||.+|.+|.||||.|+++||.+||+.|+..||+++.+...||||||-||...+.+|+.+|+.+
T Consensus 88 n~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqh 152 (228)
T KOG0512|consen 88 NHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQH 152 (228)
T ss_pred ccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhc
Confidence 34555666666666666666666666666666666666666666666666666666666655554
No 23
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.58 E-value=4.1e-14 Score=124.55 Aligned_cols=109 Identities=16% Similarity=0.111 Sum_probs=88.5
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.+++++..+..+.+..+++...+..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 116 ~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g--~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~ 193 (413)
T PHA02875 116 DIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK--ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGAN 193 (413)
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 5677778888888776554443333333344466777788776 56888999999999999999999999999999999
Q ss_pred CCCCCCCCC-cHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQNMDGK-TPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~-TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++..+..|. ||+|+|+..|+.+++++|+++.
T Consensus 194 ~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g 225 (413)
T PHA02875 194 IDYFGKNGCVAALCYAIENNKIDIVRLFIKRG 225 (413)
T ss_pred CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC
Confidence 999998874 8999999999999999999864
No 24
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.57 E-value=3.9e-14 Score=126.99 Aligned_cols=108 Identities=23% Similarity=0.260 Sum_probs=83.7
Q ss_pred HHHHHHHhcCCCCccCcH-HHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 140 SMSHMMESLTNPTKKDQI-EERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
.+..+++.+++++..+.. +.+..+++...+..+++++|+..| ++++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g--ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~ 226 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYG--ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS 226 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 556667778887766444 333333333444567777777776 56788889999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHc-CCHHHHHHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLN-SQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~-g~~~iv~~Ll~~~ 249 (251)
++.+|..|+||||+|+.. ++.+++++|+++.
T Consensus 227 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g 258 (477)
T PHA02878 227 TDARDKCGNTPLHISVGYCKDYDILKLLLEHG 258 (477)
T ss_pred CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcC
Confidence 999999999999999865 6889999888753
No 25
>PHA02741 hypothetical protein; Provisional
Probab=99.57 E-value=2.5e-14 Score=110.69 Aligned_cols=95 Identities=24% Similarity=0.291 Sum_probs=78.9
Q ss_pred CccCcHHHHHHHHhcCCCc-HHHHHHHHhcCCCccccccCC-CCchHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCc
Q 025512 152 TKKDQIEERMAKIKEDPSL-KPILDEIESGGPSAMMKYWND-KDNTALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKT 228 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~-~~~l~~L~~~~~~~~v~~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~-~Gad~~~~d~~G~T 228 (251)
+..+....++++...+..+ .+++++|+..+ .+++.++. .|+||||+|+..++.+++++|+. .|++++.+|..|+|
T Consensus 57 d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g--adin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~t 134 (169)
T PHA02741 57 DDAGQMCIHIAAEKHEAQLAAEIIDHLIELG--ADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKS 134 (169)
T ss_pred CCCCCcHHHHHHHcCChHHHHHHHHHHHHcC--CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCC
Confidence 3345556666665444322 57888888876 66888885 89999999999999999999998 59999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhC
Q 025512 229 PIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 229 pL~~A~~~g~~~iv~~Ll~~ 248 (251)
|||+|...++.+++++|+++
T Consensus 135 pL~~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 135 PFELAIDNEDVAMMQILREI 154 (169)
T ss_pred HHHHHHHCCCHHHHHHHHHH
Confidence 99999999999999999875
No 26
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=9.6e-15 Score=124.11 Aligned_cols=139 Identities=19% Similarity=0.217 Sum_probs=102.8
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhc
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESG 180 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 180 (251)
-.|+.++++.|+..+++++..-+-...-+ +-..++.+++.++++...+..+.+-..+++..+..+|.++|++.
T Consensus 93 aAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~ 172 (615)
T KOG0508|consen 93 AAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ 172 (615)
T ss_pred ccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHh
Confidence 45666777777666655442221111100 01466777788888877766665544455555556677777777
Q ss_pred CCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 181 GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 181 ~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
| +++|.++..|+|+||.|+..|+++++++|+.+|+.++. |..|.|||..|+..|+.++|++|+...
T Consensus 173 g--ADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~~ 238 (615)
T KOG0508|consen 173 G--ADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQCE 238 (615)
T ss_pred C--CCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhcCC
Confidence 6 78999999999999999999999999999999998865 667999999999999999999998643
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.57 E-value=4.5e-14 Score=126.55 Aligned_cols=109 Identities=19% Similarity=0.225 Sum_probs=90.9
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhc--CCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcC--CHHHHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKE--DPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYG--RKECVALLLE 214 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g--~~~~v~~Ll~ 214 (251)
..+..+++.+++++..+..+.+...++. ..+..+++++|+..| .+++..+..|+||||+|+..| +.+++++|++
T Consensus 87 ~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~ 164 (480)
T PHA03100 87 EIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNG--ANVNIKNSDGENLLHLYLESNKIDLKILKLLID 164 (480)
T ss_pred HHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHH
Confidence 4566677778777665544444444444 666778888888887 668888999999999999999 9999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 215 NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 215 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|++++.++..|+||||+|+..|+.+++++|+++.
T Consensus 165 ~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g 199 (480)
T PHA03100 165 KGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNG 199 (480)
T ss_pred CCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999864
No 28
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.57 E-value=1.5e-14 Score=133.36 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=57.6
Q ss_pred cccccCCCCchHHHHHHHcCCHH-----HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH-----HHHHHHHhCC
Q 025512 185 MMKYWNDKDNTALHYAAGYGRKE-----CVALLLENGAAVTLQNMDGKTPIDVAKLNSQH-----DVLKLLEKDA 249 (251)
Q Consensus 185 ~v~~~d~~G~TpLh~Aa~~g~~~-----~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~-----~iv~~Ll~~~ 249 (251)
++|..|..|+||||+|+..|+.+ ++++|++.|+|++.+|..|+||||+|++.|+. +||++|++..
T Consensus 489 nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~g 563 (764)
T PHA02716 489 NNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKR 563 (764)
T ss_pred cccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcC
Confidence 34666889999999999999874 55999999999999999999999999999976 9999998753
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.57 E-value=6.5e-14 Score=125.89 Aligned_cols=108 Identities=15% Similarity=0.116 Sum_probs=84.4
Q ss_pred hHHHHHHHhcCCCCccCcHHHH-----HH--HHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKDQIEER-----MA--KIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVAL 211 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~ 211 (251)
..+..+++.+++++..+..... +. ..........++++|..+ .++|.+|..|+||||+|+..|+.+++++
T Consensus 200 ~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~---~dvN~~d~~G~TPL~~A~~~~~~~~v~~ 276 (489)
T PHA02798 200 DILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY---IDINQVDELGFNPLYYSVSHNNRKIFEY 276 (489)
T ss_pred HHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhc---CCCCCcCcCCccHHHHHHHcCcHHHHHH
Confidence 3566667778777654322211 11 112233445666767665 6789999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 212 LLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 212 Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|+++|||++.+|..|+||||+|+..++.++++.|+++.
T Consensus 277 LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~ 314 (489)
T PHA02798 277 LLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKK 314 (489)
T ss_pred HHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccC
Confidence 99999999999999999999999999999999998763
No 30
>PHA02946 ankyin-like protein; Provisional
Probab=99.57 E-value=2.7e-14 Score=126.58 Aligned_cols=74 Identities=19% Similarity=0.194 Sum_probs=44.4
Q ss_pred HHHHHHHhcCCCccccccCCCCchHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhC
Q 025512 172 PILDEIESGGPSAMMKYWNDKDNTALHYAAGYG--RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ-HDVLKLLEKD 248 (251)
Q Consensus 172 ~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g--~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~-~~iv~~Ll~~ 248 (251)
.++++|+..| ++++.+|.+|+||||+|+..| +.+++++|+. |++++.+|..|+||||+|+..++ .+++++|+.+
T Consensus 189 ~~v~~Ll~~G--adin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~ 265 (446)
T PHA02946 189 STISWMMKLG--ISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLST 265 (446)
T ss_pred HHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhC
Confidence 3444455544 455666666666666666654 5566666663 66666666666666666666655 3566666554
No 31
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.55 E-value=1.3e-13 Score=122.23 Aligned_cols=77 Identities=30% Similarity=0.439 Sum_probs=69.6
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.++++.|+..| .+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|+++.
T Consensus 104 ~~~i~~ll~~g--~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 180 (434)
T PHA02874 104 KDMIKTILDCG--IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180 (434)
T ss_pred HHHHHHHHHCc--CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence 35566666665 667888999999999999999999999999999999999999999999999999999999999864
No 32
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.55 E-value=5.2e-14 Score=116.18 Aligned_cols=62 Identities=32% Similarity=0.453 Sum_probs=44.4
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
++||.+|.+|.|+|++||.+||.+||++||.. ++|+...|.+|.|+|.+|-..||.+|.-+|
T Consensus 364 AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~ml 426 (452)
T KOG0514|consen 364 ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVML 426 (452)
T ss_pred CCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHH
Confidence 56677777777777777777777777777665 677777777777777777777777766555
No 33
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.55 E-value=1.5e-14 Score=96.85 Aligned_cols=80 Identities=25% Similarity=0.405 Sum_probs=68.0
Q ss_pred cCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 166 EDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 166 ~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
.++.+.++-..+..+ .+||.. ..|+||||+|+-+|.+++++||+..||+++.+|+.|-|||.-|++.||.+||++|
T Consensus 11 kNG~~DeVk~~v~~g---~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklL 86 (117)
T KOG4214|consen 11 KNGEIDEVKQSVNEG---LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLL 86 (117)
T ss_pred ccCcHHHHHHHHHcc---ccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHH
Confidence 355555666555555 455543 4799999999999999999999999999999999999999999999999999999
Q ss_pred HhCC
Q 025512 246 EKDA 249 (251)
Q Consensus 246 l~~~ 249 (251)
+++.
T Consensus 87 L~~G 90 (117)
T KOG4214|consen 87 LQNG 90 (117)
T ss_pred HHcC
Confidence 9863
No 34
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.54 E-value=1.1e-13 Score=124.66 Aligned_cols=167 Identities=13% Similarity=0.071 Sum_probs=109.6
Q ss_pred CchHHHHHHHHHhhhcCCCCCCCCCc----c-chhchHHHHHHHHcCCcchHHHHHhhhhccC-------------ChHH
Q 025512 80 DPAFNSMAEQLQKTLHGANAEESIPQ----F-DTTQYYSTMQQVMQNPQFMTMAERLGNALMQ-------------DPSM 141 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~~~~~~~----~-~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~-------------~~~~ 141 (251)
+...+.+..+++.|++......+... . ...++.++++.|+++|+.++.... +...+. ...+
T Consensus 13 ~~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~-~~tpL~~a~~~~~~~~~~~~~iv 91 (494)
T PHA02989 13 TVDKNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGY-IETPLCAVLRNREITSNKIKKIV 91 (494)
T ss_pred cCcHHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCC-CCCcHHHHHhccCcchhhHHHHH
Confidence 44455566666777763221111111 1 122357888888888887654321 111100 1245
Q ss_pred HHHHHhcCCCCccCcH---HHHHHHHhcCCCcHHHHHHHHhcCCCccc-cccCCCCchHHHHHHHc--CCHHHHHHHHHC
Q 025512 142 SHMMESLTNPTKKDQI---EERMAKIKEDPSLKPILDEIESGGPSAMM-KYWNDKDNTALHYAAGY--GRKECVALLLEN 215 (251)
Q Consensus 142 ~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~L~~~~~~~~v-~~~d~~G~TpLh~Aa~~--g~~~~v~~Ll~~ 215 (251)
..+++.+++++..+.. +.+.+.........+++++|+..| +++ +..|..|+||||+|+.. ++.++|++|+++
T Consensus 92 ~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G--adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 169 (494)
T PHA02989 92 KLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG--INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF 169 (494)
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC--CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 6667888888766543 344445555556678888888877 667 67788899999988654 578999999999
Q ss_pred CCCCCC-CCCCCCcHHHHHHHcC----CHHHHHHHHhCC
Q 025512 216 GAAVTL-QNMDGKTPIDVAKLNS----QHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~~-~d~~G~TpL~~A~~~g----~~~iv~~Ll~~~ 249 (251)
|++++. .+..|.||||+|++.+ +.+++++|+++.
T Consensus 170 Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~G 208 (494)
T PHA02989 170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKG 208 (494)
T ss_pred CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCC
Confidence 999888 6788999999887654 788999888753
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.54 E-value=7.8e-14 Score=125.38 Aligned_cols=76 Identities=28% Similarity=0.343 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcC---CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---HHHHHH
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYG---RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ---HDVLKL 244 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g---~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~---~~iv~~ 244 (251)
.+++++|+..| +++|.+|..|+||||+|+..+ +.+++++|+++|+|++.+|..|+||||+|+..++ .+++++
T Consensus 89 ~~iv~~Ll~~G--adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~ 166 (489)
T PHA02798 89 LDIVKILIENG--ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKL 166 (489)
T ss_pred HHHHHHHHHCC--CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHH
Confidence 55666666665 556667777777777777654 5677777777777777777777777777777666 677777
Q ss_pred HHhC
Q 025512 245 LEKD 248 (251)
Q Consensus 245 Ll~~ 248 (251)
|+++
T Consensus 167 Ll~~ 170 (489)
T PHA02798 167 LLEK 170 (489)
T ss_pred HHHh
Confidence 7654
No 36
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.53 E-value=7.1e-14 Score=125.29 Aligned_cols=105 Identities=24% Similarity=0.258 Sum_probs=51.3
Q ss_pred HHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHc-CCHHHHHHHHHCCCC
Q 025512 140 SMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGY-GRKECVALLLENGAA 218 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~-g~~~~v~~Ll~~Gad 218 (251)
.+..+++.+++++..+..+.+....+......+++++|+..| ++++.+|..|+||||+|+.. ++.+++++|+++|++
T Consensus 183 iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g--a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad 260 (477)
T PHA02878 183 LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG--ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVD 260 (477)
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCC
Confidence 344445555554443322222222222222344444445444 44555555566666665543 455666666666666
Q ss_pred CCCCCC-CCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 219 VTLQNM-DGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++.++. .|+||||+| .++.+++++|+++
T Consensus 261 vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~ 289 (477)
T PHA02878 261 VNAKSYILGLTALHSS--IKSERKLKLLLEY 289 (477)
T ss_pred CCccCCCCCCCHHHHH--ccCHHHHHHHHHC
Confidence 655553 455666665 3445555555543
No 37
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.53 E-value=4.9e-14 Score=116.37 Aligned_cols=109 Identities=23% Similarity=0.302 Sum_probs=83.4
Q ss_pred hHHHHHHHhc-C---CCCccCcHHHHHHHHhc--CCCcHHHHHHHHhcCCCcccccc-CCCCchHHHHHHHcCCHHHHHH
Q 025512 139 PSMSHMMESL-T---NPTKKDQIEERMAKIKE--DPSLKPILDEIESGGPSAMMKYW-NDKDNTALHYAAGYGRKECVAL 211 (251)
Q Consensus 139 ~~~~~ll~~~-~---~~~~~~~~~~~~~~~~~--~~~~~~~l~~L~~~~~~~~v~~~-d~~G~TpLh~Aa~~g~~~~v~~ 211 (251)
+.+..+|+.+ . ..|..+.....+++++. .+.-..+++.|...| +||.+ ...|+|+|++|+.+|+.++|+.
T Consensus 282 ~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg---nVNaKAsQ~gQTALMLAVSHGr~d~vk~ 358 (452)
T KOG0514|consen 282 DVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG---DVNAKASQHGQTALMLAVSHGRVDMVKA 358 (452)
T ss_pred HHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc---CcchhhhhhcchhhhhhhhcCcHHHHHH
Confidence 5666666654 2 24445555556555554 334455666666654 45554 3569999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 025512 212 LLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 250 (251)
Q Consensus 212 Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 250 (251)
||..|||||+||.+|.|+|+.|++.||.+||++|+..+.
T Consensus 359 LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~ 397 (452)
T KOG0514|consen 359 LLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS 397 (452)
T ss_pred HHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCc
Confidence 999999999999999999999999999999999998763
No 38
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.52 E-value=4.3e-14 Score=133.40 Aligned_cols=139 Identities=19% Similarity=0.183 Sum_probs=102.2
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhc
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESG 180 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 180 (251)
..|+++..+.+.+..+...+....+-..+ .......+++.+.+.+.......+....+.+.+...++++|+++
T Consensus 483 q~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~ 562 (1143)
T KOG4177|consen 483 QEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH 562 (1143)
T ss_pred ccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhC
Confidence 45666777777665543332222221111 11456666777777777766655556666666667777788887
Q ss_pred CCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 181 GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 181 ~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+ ++++.+++.|+||||.||..|+.+|+.+|+++||++|..|.+|.||||.|++.|+.+++++|+..
T Consensus 563 g--Adv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~ 628 (1143)
T KOG4177|consen 563 G--ADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVV 628 (1143)
T ss_pred C--ccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhc
Confidence 7 77888899999999999999999999999999999999999999999999999999999888764
No 39
>PHA02741 hypothetical protein; Provisional
Probab=99.52 E-value=1e-13 Score=107.27 Aligned_cols=97 Identities=21% Similarity=0.204 Sum_probs=74.0
Q ss_pred CccCcHHHHHHHHhcCCCcHHHHHHHHhc-CCCccccccCCCCchHHHHHHHcCC----HHHHHHHHHCCCCCCCCCC-C
Q 025512 152 TKKDQIEERMAKIKEDPSLKPILDEIESG-GPSAMMKYWNDKDNTALHYAAGYGR----KECVALLLENGAAVTLQNM-D 225 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-~~~~~v~~~d~~G~TpLh~Aa~~g~----~~~v~~Ll~~Gad~~~~d~-~ 225 (251)
+..+....+.++..++..+++.+..+..+ ....+++.+|..|+||||+|+..|+ .+++++|+++|++++.++. .
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~ 97 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLE 97 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCC
Confidence 34455566666655554444433111211 1125678899999999999999999 5899999999999999995 9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhC
Q 025512 226 GKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 226 G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|+||||+|+..++.+++++|++.
T Consensus 98 g~TpLh~A~~~~~~~iv~~Ll~~ 120 (169)
T PHA02741 98 GDTALHLAAHRRDHDLAEWLCCQ 120 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC
Confidence 99999999999999999999963
No 40
>PHA03095 ankyrin-like protein; Provisional
Probab=99.52 E-value=1.8e-13 Score=122.34 Aligned_cols=149 Identities=14% Similarity=0.089 Sum_probs=91.5
Q ss_pred hcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCc
Q 025512 78 AKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ 156 (251)
Q Consensus 78 ~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~ 156 (251)
.++..++.+..++..|++ ++ .+..|.+.++.++.... .+.. ..+..+++.+++++..+.
T Consensus 22 ~~~~~~~~v~~Ll~~ga~--------vn~~~~~g~t~Lh~a~~~~~--------~~~~----~iv~~Ll~~Gadin~~~~ 81 (471)
T PHA03095 22 ASNVTVEEVRRLLAAGAD--------VNFRGEYGKTPLHLYLHYSS--------EKVK----DIVRLLLEAGADVNAPER 81 (471)
T ss_pred CCCCCHHHHHHHHHcCCC--------cccCCCCCCCHHHHHHHhcC--------CChH----HHHHHHHHCCCCCCCCCC
Confidence 346677888888888877 44 44556666666554420 0011 345555666666665544
Q ss_pred HHHHHHHHhcCCC-cHHHHHHHHhcCCCccccccCCCCchHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 025512 157 IEERMAKIKEDPS-LKPILDEIESGGPSAMMKYWNDKDNTALHYAA--GYGRKECVALLLENGAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa--~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 233 (251)
.+.+...++.... ..+++++|+..| ++++..|..|+||||+|+ ..++.+++++|+++|++++.+|..|+||||+|
T Consensus 82 ~g~TpLh~A~~~~~~~~iv~lLl~~g--a~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a 159 (471)
T PHA03095 82 CGFTPLHLYLYNATTLDVIKLLIKAG--ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVL 159 (471)
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 3333222222222 456666666665 556777777777777777 44567777777777777777777777777777
Q ss_pred HHcC--CHHHHHHHHhC
Q 025512 234 KLNS--QHDVLKLLEKD 248 (251)
Q Consensus 234 ~~~g--~~~iv~~Ll~~ 248 (251)
+..+ +.+++++|+++
T Consensus 160 ~~~~~~~~~iv~~Ll~~ 176 (471)
T PHA03095 160 LKSRNANVELLRLLIDA 176 (471)
T ss_pred HHcCCCCHHHHHHHHHc
Confidence 6654 46677777764
No 41
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.51 E-value=2.3e-13 Score=129.21 Aligned_cols=138 Identities=14% Similarity=0.142 Sum_probs=87.4
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhccC-------ChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhc
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALMQ-------DPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESG 180 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~-------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 180 (251)
..|+.++++.|++.+++.+..+..|...++ ...+..+++.+++++..+..+.+....+...+..+++++|...
T Consensus 534 ~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~ 613 (823)
T PLN03192 534 STGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHF 613 (823)
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhc
Confidence 345566666666655544443333322211 1344555666666655443333222222222334444444544
Q ss_pred CCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 181 GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 181 ~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+.. .+ ...|.++||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 614 ~~~--~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 678 (823)
T PLN03192 614 ASI--SD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNG 678 (823)
T ss_pred Ccc--cC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 321 11 234667777888888899999999999999999999999999999999999999999853
No 42
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=6.5e-14 Score=132.17 Aligned_cols=109 Identities=24% Similarity=0.312 Sum_probs=88.2
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
+....+++.....+...........+..+.+.+.....+..+| ++++.++.+|.||||+||..|+..+|++||++|||
T Consensus 488 ~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~g--a~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd 565 (1143)
T KOG4177|consen 488 EVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHG--ANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD 565 (1143)
T ss_pred hHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcC--CceehhcccccchHHHHHhcCCchHHHHhhhCCcc
Confidence 3444444444344444455555556666666677777777776 67888999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++.+++.|+||||.|+..|+.+|+++|+++.
T Consensus 566 v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G 596 (1143)
T KOG4177|consen 566 VNAKDKLGYTPLHQAAQQGHNDIAELLLKHG 596 (1143)
T ss_pred ccccCCCCCChhhHHHHcChHHHHHHHHHcC
Confidence 9999999999999999999999999999975
No 43
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.49 E-value=1.1e-13 Score=127.70 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=100.3
Q ss_pred hchHHHHHHHHcCC-cchHHH-HHhhhhccC---------ChHHHHHHHhcCCCCccCcHHH---HHHHHhcCCCcHHHH
Q 025512 109 TQYYSTMQQVMQNP-QFMTMA-ERLGNALMQ---------DPSMSHMMESLTNPTKKDQIEE---RMAKIKEDPSLKPIL 174 (251)
Q Consensus 109 ~g~~~l~~~l~~~~-~~~~~a-~~~~~~ll~---------~~~~~~ll~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 174 (251)
.+..++++.|++.+ +.++.. +..|...++ ...+..+++.+++++..+..+. +.++..+ ....+++
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g-~~~~eIV 230 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITG-NVCASVI 230 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CCCHHHH
Confidence 35668888999888 666554 444433222 1366677888888887655444 3333332 1235778
Q ss_pred HHHHhcCCCccccccCCCCchHHHHH-------------------------------------HHcCCHHHHHHHHHCCC
Q 025512 175 DEIESGGPSAMMKYWNDKDNTALHYA-------------------------------------AGYGRKECVALLLENGA 217 (251)
Q Consensus 175 ~~L~~~~~~~~v~~~d~~G~TpLh~A-------------------------------------a~~g~~~~v~~Ll~~Ga 217 (251)
++|+..| +++|.+|..|+||||+| +..|+.+++++|+++|+
T Consensus 231 klLLe~G--ADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GA 308 (764)
T PHA02716 231 KKIIELG--GDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV 308 (764)
T ss_pred HHHHHcC--CCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCC
Confidence 8888877 77888999999999975 34578899999999999
Q ss_pred CCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCC
Q 025512 218 AVTLQNMDGKTPIDVAKL--NSQHDVLKLLEKDA 249 (251)
Q Consensus 218 d~~~~d~~G~TpL~~A~~--~g~~~iv~~Ll~~~ 249 (251)
+++.+|..|+||||+|+. .++.+++++|+++.
T Consensus 309 dIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G 342 (764)
T PHA02716 309 KLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYG 342 (764)
T ss_pred ceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcC
Confidence 999999999999998764 46789999998753
No 44
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.2e-12 Score=104.63 Aligned_cols=106 Identities=21% Similarity=0.266 Sum_probs=79.8
Q ss_pred HHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccC-CCCchHHHHHHHc---CCHHHHHHHHHCC
Q 025512 141 MSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWN-DKDNTALHYAAGY---GRKECVALLLENG 216 (251)
Q Consensus 141 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d-~~G~TpLh~Aa~~---g~~~~v~~Ll~~G 216 (251)
+..+++.....+..+..+.+.++.. .....+++++|++.| ++++.++ ..|+||||+|+.. ++.+++++|+++|
T Consensus 37 vk~Li~~~n~~~~~g~TpLh~a~~~-~~~~~eiv~~Ll~~g--advn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g 113 (209)
T PHA02859 37 VKKWIKFVNDCNDLYETPIFSCLEK-DKVNVEILKFLIENG--ADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSG 113 (209)
T ss_pred HHHHHHhhhccCccCCCHHHHHHHc-CCCCHHHHHHHHHCC--CCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCC
Confidence 3333333333444555555554432 234578888888887 6788886 4899999998764 4799999999999
Q ss_pred CCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCC
Q 025512 217 AAVTLQNMDGKTPIDVAKL--NSQHDVLKLLEKDA 249 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~~--~g~~~iv~~Ll~~~ 249 (251)
++++.+|..|+||||+|+. .++.+++++|+++.
T Consensus 114 adin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g 148 (209)
T PHA02859 114 SSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG 148 (209)
T ss_pred CCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC
Confidence 9999999999999999876 46899999999763
No 45
>PHA02946 ankyin-like protein; Provisional
Probab=99.47 E-value=5.4e-13 Score=118.32 Aligned_cols=104 Identities=19% Similarity=0.246 Sum_probs=45.1
Q ss_pred HHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCC--HHHHHHHHHCCCC
Q 025512 141 MSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGR--KECVALLLENGAA 218 (251)
Q Consensus 141 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~--~~~v~~Ll~~Gad 218 (251)
+..+++.+++++..+..+.+..+++...+..+++++|+..| ++++.+|.+|+||||+|+..++ .+++++|+++|++
T Consensus 55 v~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Adin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gad 132 (446)
T PHA02946 55 VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHG--ADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAK 132 (446)
T ss_pred HHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCc--CCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 34444444444443333332222222222334444444443 3444445555555555444332 4445555555555
Q ss_pred CCC-CCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 219 VTL-QNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 219 ~~~-~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
++. .|..|.|||| |+..++.+++++|++
T Consensus 133 in~~~d~~g~tpL~-aa~~~~~~vv~~Ll~ 161 (446)
T PHA02946 133 INNSVDEEGCGPLL-ACTDPSERVFKKIMS 161 (446)
T ss_pred cccccCCCCCcHHH-HHHCCChHHHHHHHh
Confidence 543 3444555554 333344455554444
No 46
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.47 E-value=5e-13 Score=120.33 Aligned_cols=108 Identities=20% Similarity=0.237 Sum_probs=84.6
Q ss_pred hHHHHHHHhcCCCCccCcHH---HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKDQIE---ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..++..+++++.++... .|+++..+.. ..++.|++-.+...+|..|-.|.||||+|+..||..|+++||++
T Consensus 287 ~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~---ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~ 363 (929)
T KOG0510|consen 287 ESVDNLLGFGASINSKNKDEESPLHFAAIYGRI---NTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK 363 (929)
T ss_pred hHHHHHHHcCCcccccCCCCCCchHHHHHcccH---HHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhc
Confidence 56777777777776655444 4555544433 33344444333567888899999999999999999999999999
Q ss_pred CCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAAVT---LQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
||+.. ..|.+|.||||+|+..|+..+|++|+.+.
T Consensus 364 GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~G 400 (929)
T KOG0510|consen 364 GALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHG 400 (929)
T ss_pred ChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcC
Confidence 99987 56999999999999999999999999864
No 47
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.46 E-value=4.8e-13 Score=111.66 Aligned_cols=102 Identities=19% Similarity=0.208 Sum_probs=78.2
Q ss_pred hHHHHHHHhcCCCCcc-------CcHHHHHHHHhcCCCcHHHHHHHHhcCCCcccccc-CCCCchHHHHHHHcCCHHHHH
Q 025512 139 PSMSHMMESLTNPTKK-------DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYW-NDKDNTALHYAAGYGRKECVA 210 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~-d~~G~TpLh~Aa~~g~~~~v~ 210 (251)
..+..+++.+++++.. +..+.+.++ .....+++++|+..| ++++.. +..|+||||+|+..|+.++++
T Consensus 47 eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa---~~~~~eivklLL~~G--ADVN~~~~~~g~TpLh~Aa~~~~~eivk 121 (300)
T PHA02884 47 DIIDAILKLGADPEAPFPLSENSKTNPLIYAI---DCDNDDAAKLLIRYG--ADVNRYAEEAKITPLYISVLHGCLKCLE 121 (300)
T ss_pred HHHHHHHHCCCCccccCcccCCCCCCHHHHHH---HcCCHHHHHHHHHcC--CCcCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 4555666677776653 334444444 344567777788887 678875 457999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 211 LLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 211 ~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
+|+.+|++++.+|..|+||||+|+..++.+++.++
T Consensus 122 lLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~ 156 (300)
T PHA02884 122 ILLSYGADINIQTNDMVTPIELALMICNNFLAFMI 156 (300)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHh
Confidence 99999999999999999999999987766555443
No 48
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.46 E-value=2e-13 Score=105.24 Aligned_cols=75 Identities=19% Similarity=0.344 Sum_probs=64.9
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHH---HHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHH
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKEC---VALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~---v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
.+++++|...+ ..++..|..|+||||+|+..|+.++ +++|+++|++++.++ ..|+||||+|+..++.+++++|+
T Consensus 37 ~~~~~~l~~~g--~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll 114 (166)
T PHA02743 37 MEVAPFISGDG--HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLC 114 (166)
T ss_pred HHHHHHHhhcc--hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Confidence 35555666665 5678889999999999999998654 899999999999998 58999999999999999999998
Q ss_pred h
Q 025512 247 K 247 (251)
Q Consensus 247 ~ 247 (251)
.
T Consensus 115 ~ 115 (166)
T PHA02743 115 R 115 (166)
T ss_pred h
Confidence 4
No 49
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.46 E-value=3.4e-13 Score=121.40 Aligned_cols=62 Identities=29% Similarity=0.409 Sum_probs=56.8
Q ss_pred ccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 186 MKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 186 v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
|+..|++|.||||+||+.|+.++++.|+..|++++.++.++.||||.|++.|++++|+-|++
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 45568899999999999999999999999999999999999999999999999999988887
No 50
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.45 E-value=6.1e-13 Score=111.04 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=69.3
Q ss_pred CcHHHHHHHHhcCCCcccccc----CCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHH
Q 025512 169 SLKPILDEIESGGPSAMMKYW----NDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLK 243 (251)
Q Consensus 169 ~~~~~l~~L~~~~~~~~v~~~----d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~ 243 (251)
+..+++++|+..| ++++.+ +..|.||||+|+..++.+++++|+++|||++.++ ..|.||||+|+..++.++++
T Consensus 44 ~~~eivk~LL~~G--AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivk 121 (300)
T PHA02884 44 HYTDIIDAILKLG--ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLE 121 (300)
T ss_pred CCHHHHHHHHHCC--CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 3467777888887 567766 4589999999999999999999999999999974 68999999999999999999
Q ss_pred HHHhCC
Q 025512 244 LLEKDA 249 (251)
Q Consensus 244 ~Ll~~~ 249 (251)
+|+++.
T Consensus 122 lLL~~G 127 (300)
T PHA02884 122 ILLSYG 127 (300)
T ss_pred HHHHCC
Confidence 999864
No 51
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.44 E-value=3.3e-13 Score=100.82 Aligned_cols=90 Identities=28% Similarity=0.281 Sum_probs=71.7
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
+....|.+++.++. .|++.|+..| ++.+.+...||||||-||...+.+|+.+||++|+|||++....+||||+|+
T Consensus 97 ~YTpLHRAaYn~h~---div~~ll~~g--An~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 97 EYTPLHRAAYNGHL---DIVHELLLSG--ANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred cccHHHHHHhcCch---HHHHHHHHcc--CCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 34555666666554 4444444444 677889999999999999999999999999999999999999999999999
Q ss_pred HcCC-HHHHHHHHhCC
Q 025512 235 LNSQ-HDVLKLLEKDA 249 (251)
Q Consensus 235 ~~g~-~~iv~~Ll~~~ 249 (251)
...+ ...+++|+...
T Consensus 172 ~~rn~r~t~~~Ll~dr 187 (228)
T KOG0512|consen 172 GNRNSRDTLELLLHDR 187 (228)
T ss_pred cccchHHHHHHHhhcc
Confidence 7665 55677877654
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.43 E-value=8.3e-13 Score=114.01 Aligned_cols=65 Identities=35% Similarity=0.476 Sum_probs=59.4
Q ss_pred cccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 185 MMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 185 ~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
..+..+..|.|+||.|+..|..++.++|+++|.+++++|.+||||||.|+..|+.+++++|+.|.
T Consensus 190 ~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~g 254 (527)
T KOG0505|consen 190 ELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHG 254 (527)
T ss_pred cccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhh
Confidence 34445556999999999999999999999999999999999999999999999999999998763
No 53
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.43 E-value=1.6e-12 Score=121.52 Aligned_cols=107 Identities=23% Similarity=0.247 Sum_probs=63.0
Q ss_pred HHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCC-HHHHHHHHHCCCC
Q 025512 140 SMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGR-KECVALLLENGAA 218 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~-~~~v~~Ll~~Gad 218 (251)
.+..+++.+++++..+..+.+...++...+..+++++|+..| ++++..+..|+||||+|+..++ ..++++|+++|++
T Consensus 357 iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g--ad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad 434 (682)
T PHA02876 357 IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG--ADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGAN 434 (682)
T ss_pred HHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCC
Confidence 344455666666655444433333333334455555566555 4556666666677777665444 3556667777777
Q ss_pred CCCCCCCCCcHHHHHHHcC-CHHHHHHHHhC
Q 025512 219 VTLQNMDGKTPIDVAKLNS-QHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g-~~~iv~~Ll~~ 248 (251)
++.+|..|+||||+|+..+ +.+++++|+++
T Consensus 435 in~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~ 465 (682)
T PHA02876 435 VNSKNKDLSTPLHYACKKNCKLDVIEMLLDN 465 (682)
T ss_pred CCcCCCCCChHHHHHHHhCCcHHHHHHHHHC
Confidence 7777777777777776654 46677766654
No 54
>PHA02730 ankyrin-like protein; Provisional
Probab=99.42 E-value=8.3e-12 Score=113.57 Aligned_cols=77 Identities=19% Similarity=0.201 Sum_probs=70.2
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHc--CCHHHHHHHHh
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM-DGKTPIDVAKLN--SQHDVLKLLEK 247 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~~--g~~~iv~~Ll~ 247 (251)
.+++++|+..| +++|.+|..|+||||+|+..++.+++++|+++||+++.+|. .|.||||+|+.. ++.+++++|++
T Consensus 442 ~~ivk~LIs~G--ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs 519 (672)
T PHA02730 442 IDVFDILSKYM--DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLS 519 (672)
T ss_pred HHHHHHHHhcc--cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHH
Confidence 35688899887 77899999999999999999999999999999999999997 599999999874 78999999998
Q ss_pred CC
Q 025512 248 DA 249 (251)
Q Consensus 248 ~~ 249 (251)
+.
T Consensus 520 ~g 521 (672)
T PHA02730 520 YH 521 (672)
T ss_pred cC
Confidence 74
No 55
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.41 E-value=2.2e-12 Score=122.59 Aligned_cols=78 Identities=26% Similarity=0.379 Sum_probs=69.5
Q ss_pred cHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 170 LKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 170 ~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
...+++.|+..| .++|..|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|+++.
T Consensus 537 ~~~~l~~Ll~~G--~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~ 614 (823)
T PLN03192 537 NAALLEELLKAK--LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFA 614 (823)
T ss_pred CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcC
Confidence 356666677776 668889999999999999999999999999999999999999999999999999999999987653
No 56
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=8.2e-13 Score=113.73 Aligned_cols=66 Identities=33% Similarity=0.317 Sum_probs=61.5
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+....+..|-||||-|++.||.+||+|||+.|++||..|.+||||||.|+..++..|++.|+++.
T Consensus 574 ~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~G 639 (752)
T KOG0515|consen 574 TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESG 639 (752)
T ss_pred cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhcc
Confidence 455667889999999999999999999999999999999999999999999999999999998864
No 57
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.40 E-value=1.4e-12 Score=120.85 Aligned_cols=76 Identities=34% Similarity=0.450 Sum_probs=70.0
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
...+++|+..+ .++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 95 ~~~vk~LL~~G--adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 95 AVGARILLTGG--ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred HHHHHHHHHCC--CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 45566677766 67888999999999999999999999999999999999999999999999999999999999987
No 58
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.39 E-value=6.8e-12 Score=117.25 Aligned_cols=107 Identities=18% Similarity=0.110 Sum_probs=69.7
Q ss_pred HHHHHHHhcCCCCccCcHHHHHHHHhc-CCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 140 SMSHMMESLTNPTKKDQIEERMAKIKE-DPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
.+..++..+++++..+..+.+...++. ......++.+|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 323 ~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~g--adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad 400 (682)
T PHA02876 323 NIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELG--ANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD 400 (682)
T ss_pred HHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcC--CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 444555666666655443333222221 233445555566655 56777778888888888888888888888888888
Q ss_pred CCCCCCCCCcHHHHHHHcCC-HHHHHHHHhC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQ-HDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~-~~iv~~Ll~~ 248 (251)
++..+..|.||||+|+..++ ..++++|+++
T Consensus 401 ~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ 431 (682)
T PHA02876 401 IEALSQKIGTALHFALCGTNPYMSVKTLIDR 431 (682)
T ss_pred ccccCCCCCchHHHHHHcCCHHHHHHHHHhC
Confidence 88888888888888876555 4567777764
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=99.38 E-value=5.5e-12 Score=116.44 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=98.7
Q ss_pred HHHHHHHHcCCcchHHHHHhhhhc--cCC-hHHHHHHH-hcCCCCcc---CcHHHHHHHHhc------------------
Q 025512 112 YSTMQQVMQNPQFMTMAERLGNAL--MQD-PSMSHMME-SLTNPTKK---DQIEERMAKIKE------------------ 166 (251)
Q Consensus 112 ~~l~~~l~~~~~~~~~a~~~~~~l--l~~-~~~~~ll~-~~~~~~~~---~~~~~~~~~~~~------------------ 166 (251)
.++++.|+..|+.++.....|... ..+ ..+..++. .+++.+.. +..+.+.++...
T Consensus 346 ~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~ 425 (661)
T PHA02917 346 IPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDM 425 (661)
T ss_pred HHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchh
Confidence 467888888888766544444331 111 25555565 35443332 334444332110
Q ss_pred --CCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-cCCHHHHH
Q 025512 167 --DPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL-NSQHDVLK 243 (251)
Q Consensus 167 --~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~-~g~~~iv~ 243 (251)
.....+++++|+..| +++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+. .++.++++
T Consensus 426 ~~~~~~~~~v~~Ll~~G--AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~ 503 (661)
T PHA02917 426 SYACPILSTINICLPYL--KDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLK 503 (661)
T ss_pred hhhhhhHHHHHHHHHCC--CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHH
Confidence 111466788899987 7789999999999999999999999999999999999999999999999996 78999999
Q ss_pred HHHhCC
Q 025512 244 LLEKDA 249 (251)
Q Consensus 244 ~Ll~~~ 249 (251)
+|+.+.
T Consensus 504 ~LL~~g 509 (661)
T PHA02917 504 MLLCHK 509 (661)
T ss_pred HHHHcC
Confidence 999764
No 60
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.38 E-value=2.7e-12 Score=111.52 Aligned_cols=161 Identities=17% Similarity=0.237 Sum_probs=105.0
Q ss_pred ccccccccCCC---hhHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc---cchhchHHHHHHHHcCCcchHHHHH
Q 025512 57 DFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ---FDTTQYYSTMQQVMQNPQFMTMAER 130 (251)
Q Consensus 57 ~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~ 130 (251)
|.|++++|-.| .++..++..|| |..-|.|-|-.-.|-..+..++.... |++.+|....+.
T Consensus 549 ~lSrvr~LeLDdWPvEl~~Vm~aiG-N~~AN~vWE~~~~G~~KPs~~s~REEkErwIr~KYeqklFL------------- 614 (749)
T KOG0705|consen 549 HLSRVRSLELDDWPVELLKVMSAIG-NDLANSVWEGSSQGQTKPSPDSSREEKERWIRAKYEQKLFL------------- 614 (749)
T ss_pred hhhhhhccccccCcHHHHHHHHHhh-hhHHHHHhhhhccCCcCCCccccHHHHHHHHHHHHHHHhhc-------------
Confidence 78999999554 78888999999 88778887764444442111111111 222222221110
Q ss_pred hhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcccc--ccCCCCchHHHHHHHcCCHHH
Q 025512 131 LGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMK--YWNDKDNTALHYAAGYGRKEC 208 (251)
Q Consensus 131 ~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~--~~d~~G~TpLh~Aa~~g~~~~ 208 (251)
.|. +-..-..+..+.....+.++..++- |+.+|....+| +-+.+|+|+||+||..|++.+
T Consensus 615 -------aPl----------~~te~~lgqqLl~A~~~~Dl~t~~l-LLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl 676 (749)
T KOG0705|consen 615 -------APL----------PCTEEPLGQQLLRAVAAEDLQTAIL-LLAHGSREEVNETCGEGDGRTALHLAARKGNVVL 676 (749)
T ss_pred -------CCC----------CCCCCchHHHHHHHHHHHHHHHHHH-HHhccCchhhhccccCCCCcchhhhhhhhcchhH
Confidence 010 1111122333333333444444443 44444344443 346678999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 209 VALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 209 v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.++|+-+|+|+.++|.+|+|+|.||.+.|..+|+.+|+.+.
T Consensus 677 ~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~g 717 (749)
T KOG0705|consen 677 AQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYG 717 (749)
T ss_pred HHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999874
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=3.1e-12 Score=115.27 Aligned_cols=137 Identities=12% Similarity=0.138 Sum_probs=98.0
Q ss_pred hHHHHHHHHcCCcchHH---HHHhhhhc-cCC-hHHHHHHHhcCCCCccCcH-----HHHHHHHhcCCCcHHHHHHHHhc
Q 025512 111 YYSTMQQVMQNPQFMTM---AERLGNAL-MQD-PSMSHMMESLTNPTKKDQI-----EERMAKIKEDPSLKPILDEIESG 180 (251)
Q Consensus 111 ~~~l~~~l~~~~~~~~~---a~~~~~~l-l~~-~~~~~ll~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~L~~~ 180 (251)
+.++++.++.+++.... .+...... ..+ ..+..+++.+++++..+.. +.+.+..........++++|+..
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~ 399 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY 399 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc
Confidence 55778888887775421 11111111 112 4666677888888765533 33444444445566778888887
Q ss_pred CCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH---cC-------CHHHHHHHHhCC
Q 025512 181 GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL---NS-------QHDVLKLLEKDA 249 (251)
Q Consensus 181 ~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~---~g-------~~~iv~~Ll~~~ 249 (251)
| +++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|.. .+ ..+++++|+++.
T Consensus 400 G--ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~ 476 (631)
T PHA02792 400 I--DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKL 476 (631)
T ss_pred C--CccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcC
Confidence 7 6789999999999999999999999999999999999999999999999975 22 245677777653
No 62
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.36 E-value=1.3e-12 Score=105.10 Aligned_cols=89 Identities=26% Similarity=0.239 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 159 ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 159 ~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
....+.....+...+++.|+..| +-||..+....||||+|+.+||.++|+.|+++.+|+|+.+..|.|||||||..|+
T Consensus 35 fsplhwaakegh~aivemll~rg--arvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgy 112 (448)
T KOG0195|consen 35 FSPLHWAAKEGHVAIVEMLLSRG--ARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGY 112 (448)
T ss_pred cchhhhhhhcccHHHHHHHHhcc--cccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcH
Confidence 33455555666677778788877 5577777777899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 025512 239 HDVLKLLEKDA 249 (251)
Q Consensus 239 ~~iv~~Ll~~~ 249 (251)
..|++-|+.+.
T Consensus 113 dqiaedli~~g 123 (448)
T KOG0195|consen 113 DQIAEDLISCG 123 (448)
T ss_pred HHHHHHHHhcc
Confidence 99999888753
No 63
>PHA02795 ankyrin-like protein; Provisional
Probab=99.35 E-value=9.7e-12 Score=108.13 Aligned_cols=108 Identities=11% Similarity=-0.067 Sum_probs=85.1
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcccccc-----CCCCchHHHHHHHcCCHHHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYW-----NDKDNTALHYAAGYGRKECVALLL 213 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~-----d~~G~TpLh~Aa~~g~~~~v~~Ll 213 (251)
+.+..|++.|++++.... .+....+......+++++|+..|.. +.+.. +..+.|++|.|+..++.+++++|+
T Consensus 132 eiV~~LI~~GADIn~~~~--~t~lh~A~~~~~~eIVk~Lls~Ga~-~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LI 208 (437)
T PHA02795 132 DIVDFMVDHGAVIYKIEC--LNAYFRGICKKESSVVEFILNCGIP-DENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCI 208 (437)
T ss_pred HHHHHHHHCCCCCCCCCC--CCHHHHHHHcCcHHHHHHHHhcCCc-ccccccchhhhhhccchhHHHHhcCHHHHHHHHH
Confidence 688888999999877443 2222333344456777778887742 22222 234789999999999999999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 214 ENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 214 ~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++||+++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 209 s~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G 244 (437)
T PHA02795 209 PYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG 244 (437)
T ss_pred hCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 999999999999999999999999999999999864
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.34 E-value=1.4e-12 Score=99.30 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=70.2
Q ss_pred CCccCcHHHHHHHHhcCCCcHHHHHHHHh--cCCCccccccCCCCchHHHHHHHcCCH---HHHHHHHHCCCCCCCCC-C
Q 025512 151 PTKKDQIEERMAKIKEDPSLKPILDEIES--GGPSAMMKYWNDKDNTALHYAAGYGRK---ECVALLLENGAAVTLQN-M 224 (251)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~~--~~~~~~v~~~d~~G~TpLh~Aa~~g~~---~~v~~Ll~~Gad~~~~d-~ 224 (251)
.+..+....+.++..++ ...++.+... ......++..|.+|+||||+|+..|+. +++++|+++|++++.++ .
T Consensus 13 ~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~ 90 (154)
T PHA02736 13 PDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV 90 (154)
T ss_pred cCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCC
Confidence 34456666676665543 3333321111 111112345688999999999999987 46899999999999998 5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.|+||||+|+..++.+++++|+++
T Consensus 91 ~g~T~Lh~A~~~~~~~i~~~Ll~~ 114 (154)
T PHA02736 91 FGNTPLHIAVYTQNYELATWLCNQ 114 (154)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhC
Confidence 999999999999999999999863
No 65
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.30 E-value=2.4e-12 Score=99.82 Aligned_cols=65 Identities=22% Similarity=0.258 Sum_probs=45.3
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+.||..|+.|.|||+||+.+||+++|++||+.|||+++..+...|+|.+|++.|+.+||++|+.+
T Consensus 151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r 215 (296)
T KOG0502|consen 151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR 215 (296)
T ss_pred ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc
Confidence 45666777777777777777777777777777777776666666666666666666666666653
No 66
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.28 E-value=1.2e-10 Score=109.90 Aligned_cols=156 Identities=19% Similarity=0.175 Sum_probs=96.8
Q ss_pred HHHHHHHHhcCchHHHHHHHHHh--hhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHH
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQK--TLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMME 146 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~--~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~ 146 (251)
...+...+. ......+..+++. +.+ ++ .|..|.+.++.+...++. . ..+..+++
T Consensus 18 ~~~~l~A~~-~g~~~~v~~lL~~~~~~~--------in~~d~~G~t~Lh~~A~~~~~----------~----eiv~lLl~ 74 (743)
T TIGR00870 18 EKAFLPAAE-RGDLASVYRDLEEPKKLN--------INCPDRLGRSALFVAAIENEN----------L----ELTELLLN 74 (743)
T ss_pred HHHHHHHHH-cCCHHHHHHHhccccccC--------CCCcCccchhHHHHHHHhcCh----------H----HHHHHHHh
Confidence 344444444 4555666666666 444 44 567788888833333211 0 12222222
Q ss_pred hcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCc----cc----cccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 147 SLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSA----MM----KYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~----~v----~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
.+. .+..+....+.++.........++..+...+... .+ ...+..|.||||+|+..|+.++|++|+++||+
T Consensus 75 ~g~-~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAd 153 (743)
T TIGR00870 75 LSC-RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS 153 (743)
T ss_pred CCC-CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Confidence 222 2334445555444322233444555554443110 01 11235699999999999999999999999999
Q ss_pred CCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQN--------------MDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d--------------~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++.++ ..|.||||+|+..|+.+++++|++++
T Consensus 154 v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g 198 (743)
T TIGR00870 154 VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDP 198 (743)
T ss_pred CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCC
Confidence 99763 36899999999999999999999876
No 67
>PHA02730 ankyrin-like protein; Provisional
Probab=99.25 E-value=8.8e-11 Score=107.00 Aligned_cols=106 Identities=15% Similarity=0.048 Sum_probs=73.6
Q ss_pred HHHHHHHhcCCCC----ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcC--CHHHHHHHH
Q 025512 140 SMSHMMESLTNPT----KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYG--RKECVALLL 213 (251)
Q Consensus 140 ~~~~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g--~~~~v~~Ll 213 (251)
.+..+++..++.+ ..+....+.++........+++++|+..| ++++.+|..|+||||+|+..+ +.++|++|+
T Consensus 22 ~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~G--Adin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll 99 (672)
T PHA02730 22 KIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRG--VERLCRNNEGLTPLGVYSKRKYVKSQIVHLLI 99 (672)
T ss_pred HHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC--CCCcccCCCCCChHHHHHHcCCCcHHHHHHHH
Confidence 3444455544444 23344555554443334567777788777 677888888888888888866 688888888
Q ss_pred HCCC--CCCCCCCCCCcHHHHHHH--cCCHHHHHHHHh
Q 025512 214 ENGA--AVTLQNMDGKTPIDVAKL--NSQHDVLKLLEK 247 (251)
Q Consensus 214 ~~Ga--d~~~~d~~G~TpL~~A~~--~g~~~iv~~Ll~ 247 (251)
++|+ +++..+..+.+|||.++. .++.++|++|++
T Consensus 100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~ 137 (672)
T PHA02730 100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIV 137 (672)
T ss_pred hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHH
Confidence 8855 447777778888888887 788888888884
No 68
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=1.9e-10 Score=99.45 Aligned_cols=92 Identities=21% Similarity=0.135 Sum_probs=73.7
Q ss_pred CCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcH
Q 025512 151 PTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTP 229 (251)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~Tp 229 (251)
+|..+....|-++.+ ..-+|++||+..| ++||..|.+||||||+|+.++++.+|+.|++.|+-|.+.. .++.||
T Consensus 579 pNdEGITaLHNAiCa---ghyeIVkFLi~~g--anVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa 653 (752)
T KOG0515|consen 579 PNDEGITALHNAICA---GHYEIVKFLIEFG--ANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETA 653 (752)
T ss_pred CCccchhHHhhhhhc---chhHHHHHHHhcC--CcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccch
Confidence 344444444444433 3457888889887 8899999999999999999999999999999999988766 688899
Q ss_pred HHHHH--HcCCHHHHHHHHh
Q 025512 230 IDVAK--LNSQHDVLKLLEK 247 (251)
Q Consensus 230 L~~A~--~~g~~~iv~~Ll~ 247 (251)
..-+- +.|+.+|.+||-.
T Consensus 654 ~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 654 AEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred hhhcchhhhhHHHHHHHHHH
Confidence 98774 6789999999854
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2e-11 Score=98.31 Aligned_cols=101 Identities=24% Similarity=0.293 Sum_probs=79.9
Q ss_pred chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccc
Q 025512 107 DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMM 186 (251)
Q Consensus 107 ~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v 186 (251)
-++|+..+++.|+..++.++. .+..+....++++..++.+++..+ |... ++|
T Consensus 42 akegh~aivemll~rgarvn~-----------------------tnmgddtplhlaaahghrdivqkl--l~~k---adv 93 (448)
T KOG0195|consen 42 AKEGHVAIVEMLLSRGARVNS-----------------------TNMGDDTPLHLAAAHGHRDIVQKL--LSRK---ADV 93 (448)
T ss_pred hhcccHHHHHHHHhccccccc-----------------------ccCCCCcchhhhhhcccHHHHHHH--HHHh---ccc
Confidence 467788888888886664332 344556677787777776554443 4443 788
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 025512 187 KYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL 235 (251)
Q Consensus 187 ~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 235 (251)
|+.+..|+|||||||..|...+++-|+..||.+++.++.|.|||..|.-
T Consensus 94 navnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 94 NAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred chhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhch
Confidence 9999999999999999999999999999999999999999999998753
No 70
>PF13606 Ank_3: Ankyrin repeat
Probab=99.21 E-value=1.9e-11 Score=65.99 Aligned_cols=30 Identities=50% Similarity=0.620 Sum_probs=28.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 025512 192 KDNTALHYAAGYGRKECVALLLENGAAVTL 221 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~ 221 (251)
+|+||||+||..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999999974
No 71
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.20 E-value=2.2e-10 Score=78.70 Aligned_cols=79 Identities=30% Similarity=0.364 Sum_probs=57.7
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.+.+.+. +....+.++.. +..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 11 ~~~~~ll~~~~~~~~-~~~~l~~A~~~---~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 84 (89)
T PF12796_consen 11 EILKFLLEKGADINL-GNTALHYAAEN---GNLEIVKLLLENG--ADINSQDKNGNTALHYAAENGNLEIVKLLLEHGAD 84 (89)
T ss_dssp HHHHHHHHTTSTTTS-SSBHHHHHHHT---TTHHHHHHHHHTT--TCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-
T ss_pred HHHHHHHHCcCCCCC-CCCHHHHHHHc---CCHHHHHHHHHhc--ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 344555555544554 33445555544 3478888888877 67888999999999999999999999999999999
Q ss_pred CCCCC
Q 025512 219 VTLQN 223 (251)
Q Consensus 219 ~~~~d 223 (251)
++.+|
T Consensus 85 ~~~~n 89 (89)
T PF12796_consen 85 VNIRN 89 (89)
T ss_dssp TTSS-
T ss_pred CCCcC
Confidence 99876
No 72
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.17 E-value=5.1e-11 Score=66.09 Aligned_cols=33 Identities=42% Similarity=0.659 Sum_probs=31.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 025512 192 KDNTALHYAAGYGRKECVALLLENGAAVTLQNM 224 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~ 224 (251)
+|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999999874
No 73
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.16 E-value=1.7e-10 Score=99.94 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=75.4
Q ss_pred HHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 025512 141 MSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVT 220 (251)
Q Consensus 141 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~ 220 (251)
+.-++..+.........+.+..+++...++.+++.+|+..+ ..++.+|.+||||||.|+..|+.+++++|+++|++++
T Consensus 181 ~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag--~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d 258 (527)
T KOG0505|consen 181 ARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG--YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD 258 (527)
T ss_pred HHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc--cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccc
Confidence 33345566655554444555556666667888888888887 5678889999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHH
Q 025512 221 LQNMDGKTPIDVAKL 235 (251)
Q Consensus 221 ~~d~~G~TpL~~A~~ 235 (251)
..+..|.||+.+|..
T Consensus 259 ~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 259 AKTKMGETPLDVADE 273 (527)
T ss_pred hhhhcCCCCccchhh
Confidence 999999999999875
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.16 E-value=7e-10 Score=80.19 Aligned_cols=74 Identities=36% Similarity=0.516 Sum_probs=64.4
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
.+++++|+..+ ..++..+..|.||+|+|+..++.+++++|+..|.+++..+..|.||+++|...++.+++++|+
T Consensus 53 ~~~~~~ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 53 LEIVKLLLEKG--ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHHHHHHcC--CCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 47777777765 356777888999999999999999999999999999999999999999999999999999875
No 75
>PHA02792 ankyrin-like protein; Provisional
Probab=99.15 E-value=1.7e-10 Score=104.12 Aligned_cols=141 Identities=9% Similarity=0.046 Sum_probs=94.7
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhccC-------C-hHHHHHHHhcCCCCccCcHHHH--HHHHhcCCCcHHHHHHH
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALMQ-------D-PSMSHMMESLTNPTKKDQIEER--MAKIKEDPSLKPILDEI 177 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~-------~-~~~~~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~L 177 (251)
..++++++..|+.+|++++.+...+..++. . ..+..+++.++++......+.. ...+.. .+.-.+-..+
T Consensus 81 ~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~-~~~~~~~~~~ 159 (631)
T PHA02792 81 DNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITR-AEYYNWDDEL 159 (631)
T ss_pred hcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccc-ccccchhhhc
Confidence 457889999999999988777665544311 1 2556667777765433222221 111110 0000000001
Q ss_pred HhcCCCccccccCCCCchHHHHHHHcC-------CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhC
Q 025512 178 ESGGPSAMMKYWNDKDNTALHYAAGYG-------RKECVALLLENGAAVTLQNMDGKTPIDVAKLNS--QHDVLKLLEKD 248 (251)
Q Consensus 178 ~~~~~~~~v~~~d~~G~TpLh~Aa~~g-------~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g--~~~iv~~Ll~~ 248 (251)
....-.-.+|+.|..|+||||+|+..+ +.+++++|+.+|++++.+|..|.||||+|+... ..+|+++|++.
T Consensus 160 ~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 160 DDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred cccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence 100001245778889999999999999 899999999999999999999999999999999 78999999875
Q ss_pred C
Q 025512 249 A 249 (251)
Q Consensus 249 ~ 249 (251)
+
T Consensus 240 ~ 240 (631)
T PHA02792 240 N 240 (631)
T ss_pred c
Confidence 3
No 76
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.12 E-value=1e-10 Score=104.99 Aligned_cols=127 Identities=19% Similarity=0.257 Sum_probs=94.7
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcc
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAM 185 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~ 185 (251)
.|..|++.+.-+.++... .....++.+.....+ ...++....+++++.++.+..+++ |... ..
T Consensus 45 qd~~gfTalhha~Lng~~------~is~llle~ea~ldl------~d~kg~~plhlaaw~g~~e~vkml--l~q~---d~ 107 (854)
T KOG0507|consen 45 QDYSGFTLLHHAVLNGQN------QISKLLLDYEALLDL------CDTKGILPLHLAAWNGNLEIVKML--LLQT---DI 107 (854)
T ss_pred cCccchhHHHHHHhcCch------HHHHHHhcchhhhhh------hhccCcceEEehhhcCcchHHHHH--Hhcc---cC
Confidence 356778888877777332 222223322222211 224455566777777777666665 4444 56
Q ss_pred ccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 186 MKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 186 v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|..+..|.||||.|+++||.+++.+|+.+|+|+-++|..+.|+|++|++.|..++|++|++..
T Consensus 108 ~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~ 171 (854)
T KOG0507|consen 108 LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKK 171 (854)
T ss_pred CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhc
Confidence 7888899999999999999999999999999999999999999999999999999999998753
No 77
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.12 E-value=6.1e-11 Score=101.13 Aligned_cols=84 Identities=30% Similarity=0.332 Sum_probs=74.8
Q ss_pred HHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHH
Q 025512 163 KIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVAKLNSQHDV 241 (251)
Q Consensus 163 ~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g~~~i 241 (251)
..+..+++..+-.+++.+ .+++..|.+.+|+||+||..||+++|++|++. +.+++.+|++|+|||+-|...+|.+|
T Consensus 512 ~aa~~GD~~alrRf~l~g---~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v 588 (622)
T KOG0506|consen 512 YAAKNGDLSALRRFALQG---MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV 588 (622)
T ss_pred hhhhcCCHHHHHHHHHhc---ccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence 334466677777777777 67899999999999999999999999999987 99999999999999999999999999
Q ss_pred HHHHHhCC
Q 025512 242 LKLLEKDA 249 (251)
Q Consensus 242 v~~Ll~~~ 249 (251)
+++|.+.+
T Consensus 589 ~k~L~~~~ 596 (622)
T KOG0506|consen 589 VKLLEEAQ 596 (622)
T ss_pred HHHHHHHh
Confidence 99998865
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.11 E-value=2.9e-10 Score=90.80 Aligned_cols=108 Identities=26% Similarity=0.342 Sum_probs=78.2
Q ss_pred HHHHHHhcCCCCccCcHHHH---HHHHhcC--CCcHHHHHHHHhcCCC-ccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 025512 141 MSHMMESLTNPTKKDQIEER---MAKIKED--PSLKPILDEIESGGPS-AMMKYWNDKDNTALHYAAGYGRKECVALLLE 214 (251)
Q Consensus 141 ~~~ll~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~l~~L~~~~~~-~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~ 214 (251)
+..++..+.+++..+..+.+ ++....+ .....++++|+..+.. .+.+.+|..|+||||+|+..|+.+++++|++
T Consensus 89 ~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~ 168 (235)
T COG0666 89 VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLE 168 (235)
T ss_pred HHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHh
Confidence 34556666666555544443 3333333 1226677777777631 2455668889999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 215 NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 215 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.|++++.++..|.|++++|+..++.+++.+|++.
T Consensus 169 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 169 AGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred cCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 9999998889999999999999998888888774
No 79
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.10 E-value=4.8e-10 Score=89.51 Aligned_cols=74 Identities=36% Similarity=0.500 Sum_probs=65.0
Q ss_pred HHHHHHhcCCCccccccCCCCchHHHHHHHcCC-----HHHHHHHHHCCC---CCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 025512 173 ILDEIESGGPSAMMKYWNDKDNTALHYAAGYGR-----KECVALLLENGA---AVTLQNMDGKTPIDVAKLNSQHDVLKL 244 (251)
Q Consensus 173 ~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~-----~~~v~~Ll~~Ga---d~~~~d~~G~TpL~~A~~~g~~~iv~~ 244 (251)
++.++...+ .+++.+|..|.||||+|+..++ .+++++|++.|+ +.+.+|..|+||||+|+..|+.+++++
T Consensus 88 ~~~~l~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 165 (235)
T COG0666 88 IVKLLLASG--ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVEL 165 (235)
T ss_pred HHHHHHHcC--CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHH
Confidence 334455555 5668899999999999999999 999999999999 666779999999999999999999999
Q ss_pred HHhC
Q 025512 245 LEKD 248 (251)
Q Consensus 245 Ll~~ 248 (251)
|++.
T Consensus 166 ll~~ 169 (235)
T COG0666 166 LLEA 169 (235)
T ss_pred HHhc
Confidence 9875
No 80
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.10 E-value=5.8e-10 Score=89.92 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=60.5
Q ss_pred HHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccc-cCCCCchHHHHHHHcCCHHHHHHHHHCCCCC
Q 025512 141 MSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKY-WNDKDNTALHYAAGYGRKECVALLLENGAAV 219 (251)
Q Consensus 141 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~ 219 (251)
...+|......+..+..+-...+.+...+...+++.|+..| ++||. ++..+.||||+|+..|+.+++++|++.|+..
T Consensus 28 a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~g--aDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~ 105 (396)
T KOG1710|consen 28 ALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG--ADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARM 105 (396)
T ss_pred HHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC--CCcCcccccccccHHHHHHHcCCchHHHHHHhccCcc
Confidence 33444444444544444444333333444455555555554 34442 2344666777777777777777777777776
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 220 TLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 220 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
...|.-|+|+-.+|+..||.+||.++-++
T Consensus 106 ~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 106 YLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred ccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 66666677777777777777766665444
No 81
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.09 E-value=1.9e-09 Score=72.55 Aligned_cols=69 Identities=32% Similarity=0.369 Sum_probs=59.7
Q ss_pred HHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 025512 163 KIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 163 ~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 233 (251)
+++.+-+..+++++|+.-| ++++..|+.|-|||.-|++.||..||++||..|||-..+.-+|.+.+..+
T Consensus 39 hyAAD~GQl~ilefli~iG--A~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 39 HYAADYGQLSILEFLISIG--ANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred hHhhhcchHHHHHHHHHhc--cccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 3455666678999999887 78899999999999999999999999999999999999888887766553
No 82
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.04 E-value=1.8e-09 Score=78.04 Aligned_cols=89 Identities=34% Similarity=0.434 Sum_probs=73.5
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
+....+.+.... ..+++++|+..+ .+.+..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+
T Consensus 7 g~t~l~~a~~~~---~~~~i~~li~~~--~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 7 GRTPLHLAASNG---HLEVVKLLLENG--ADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA 81 (126)
T ss_pred CCCHHHHHHHcC---cHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 334444444333 347777777776 334777889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhC
Q 025512 235 LNSQHDVLKLLEKD 248 (251)
Q Consensus 235 ~~g~~~iv~~Ll~~ 248 (251)
..++.+++++|+++
T Consensus 82 ~~~~~~~~~~L~~~ 95 (126)
T cd00204 82 RNGNLDVVKLLLKH 95 (126)
T ss_pred HcCcHHHHHHHHHc
Confidence 99999999999885
No 83
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.03 E-value=9.2e-10 Score=94.49 Aligned_cols=83 Identities=29% Similarity=0.368 Sum_probs=69.5
Q ss_pred HhcCCCcHHHHHHHHhcCCCccccccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 025512 164 IKEDPSLKPILDEIESGGPSAMMKYWN-DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVL 242 (251)
Q Consensus 164 ~~~~~~~~~~l~~L~~~~~~~~v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv 242 (251)
...-..+...|.+|..| +++|+.+ ..|.||||.|++.|+.--+++|+-+|||++.+|.+|+||+.+|...||.++.
T Consensus 140 svRt~nlet~LRll~lG---A~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la 216 (669)
T KOG0818|consen 140 SVRTGNLETCLRLLSLG---AQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA 216 (669)
T ss_pred HhhcccHHHHHHHHHcc---cccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence 33344455556666666 5667765 4699999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCC
Q 025512 243 KLLEKDA 249 (251)
Q Consensus 243 ~~Ll~~~ 249 (251)
+.|++.+
T Consensus 217 eRl~e~~ 223 (669)
T KOG0818|consen 217 ERLVEIQ 223 (669)
T ss_pred HHHHHHH
Confidence 8887643
No 84
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.00 E-value=1.3e-09 Score=87.84 Aligned_cols=65 Identities=31% Similarity=0.272 Sum_probs=60.8
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQ-NMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
..+|.+|..|.|+|..|++.|+.++|++||+.|||||.. +..+.||||+|+..|+.++.++|++.
T Consensus 36 r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlllda 101 (396)
T KOG1710|consen 36 RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDA 101 (396)
T ss_pred hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhc
Confidence 568999999999999999999999999999999999974 57899999999999999999999874
No 85
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=1.7e-09 Score=93.76 Aligned_cols=66 Identities=24% Similarity=0.406 Sum_probs=60.6
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
...|+..|..|+||||+|+..||.++++.|+.+|||+.++|..||+|||.|+..|+..++..++++
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 356788899999999999999999999999999999999999999999999999999888766553
No 86
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.94 E-value=2.6e-09 Score=96.88 Aligned_cols=133 Identities=17% Similarity=0.118 Sum_probs=92.0
Q ss_pred chHHHHHHHHcCCcchHHHHHhhhhccCChH-HHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccc
Q 025512 110 QYYSTMQQVMQNPQFMTMAERLGNALMQDPS-MSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKY 188 (251)
Q Consensus 110 g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~-~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~ 188 (251)
...+++..|+..+++++..... .....++. ...-..++....+-+.++..+++..+++++..+ |+..+ ++++.
T Consensus 195 ~~~~~V~lLl~~gADV~aRa~G-~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrl---Ll~~g--Ad~~a 268 (782)
T KOG3676|consen 195 RDAELVRLLLAAGADVHARACG-AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRL---LLAHG--ADPNA 268 (782)
T ss_pred ccHHHHHHHHHcCCchhhHhhc-cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHH---HHhcC--CCCCc
Confidence 3445566666677766654322 22111111 110111112223345556666666666655554 45554 78999
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 189 WNDKDNTALHYAAGYGRKECVALLLENGAA--VTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 189 ~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad--~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+|..|+|.||..+..-..++-.+++++|++ ...+|..|.|||-+|+..|..+|.+.+++.
T Consensus 269 qDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 269 QDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 999999999999999889999999999999 999999999999999999999999888765
No 87
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.92 E-value=8.6e-10 Score=99.12 Aligned_cols=89 Identities=22% Similarity=0.228 Sum_probs=73.1
Q ss_pred cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 025512 156 QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL 235 (251)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 235 (251)
....+.+++.++. ++..+|+... ..++..|..|.+|||+|++.|+.++|++|+.++..+|+.+..|.||||.|++
T Consensus 50 fTalhha~Lng~~---~is~llle~e--a~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaq 124 (854)
T KOG0507|consen 50 FTLLHHAVLNGQN---QISKLLLDYE--ALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQ 124 (854)
T ss_pred hhHHHHHHhcCch---HHHHHHhcch--hhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhh
Confidence 3444555555554 4444455553 4466678899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCC
Q 025512 236 NSQHDVLKLLEKDA 249 (251)
Q Consensus 236 ~g~~~iv~~Ll~~~ 249 (251)
.||.+++.+|+++.
T Consensus 125 hgh~dvv~~Ll~~~ 138 (854)
T KOG0507|consen 125 HGHLEVVFYLLKKN 138 (854)
T ss_pred hcchHHHHHHHhcC
Confidence 99999999999875
No 88
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.90 E-value=7.5e-09 Score=93.96 Aligned_cols=97 Identities=22% Similarity=0.238 Sum_probs=76.2
Q ss_pred cCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcccccc---------C--------------CCCchHHHHHHHcC
Q 025512 148 LTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYW---------N--------------DKDNTALHYAAGYG 204 (251)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~---------d--------------~~G~TpLh~Aa~~g 204 (251)
+.+..+.+....|+++...+..++.+ |+..| ++|+.+ | ..|..||.+||+.+
T Consensus 177 ~~~eeY~GqSaLHiAIv~~~~~~V~l---Ll~~g--ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~n 251 (782)
T KOG3676|consen 177 YTSEEYYGQSALHIAIVNRDAELVRL---LLAAG--ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTN 251 (782)
T ss_pred hhhHhhcCcchHHHHHHhccHHHHHH---HHHcC--CchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcC
Confidence 33456677888888888877655554 45444 445443 1 23789999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 205 RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 205 ~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+.+|+++|+++|||++.+|..|+|-||..+..-..++-.+++++.
T Consensus 252 q~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~g 296 (782)
T KOG3676|consen 252 QPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELG 296 (782)
T ss_pred CHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999887778888777653
No 89
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.90 E-value=3.1e-09 Score=100.35 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=68.5
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcC---------CHHHHHHHHHCCCCC------
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYG---------RKECVALLLENGAAV------ 219 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g---------~~~~v~~Ll~~Gad~------ 219 (251)
+....+.++..++ .+++++|+..+ ++++.+|..|+||||+|+..+ ...|.+++++.++..
T Consensus 175 g~tpL~~Aa~~~~---~~iv~lLl~~g--adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el 249 (743)
T TIGR00870 175 GESPLNAAACLGS---PSIVALLSEDP--ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL 249 (743)
T ss_pred cccHHHHHHHhCC---HHHHHHHhcCC--cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhh
Confidence 3444555554444 45666667765 678999999999999999987 345677777776654
Q ss_pred -CCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 220 -TLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 220 -~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
+.+|.+|.||||+|+..|+.+++++|++
T Consensus 250 ~~i~N~~g~TPL~~A~~~g~~~l~~lLL~ 278 (743)
T TIGR00870 250 EVILNHQGLTPLKLAAKEGRIVLFRLKLA 278 (743)
T ss_pred hhhcCCCCCCchhhhhhcCCccHHHHHHH
Confidence 6779999999999999999999999987
No 90
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.85 E-value=5.8e-09 Score=79.32 Aligned_cols=65 Identities=23% Similarity=0.211 Sum_probs=61.9
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.++|.+|..|||||++|+..|..+.|.||+.+| ++|...|..|.+++.+|.+.|+.++|..|.++
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 468999999999999999999999999999999 99999999999999999999999999998764
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.83 E-value=1.3e-09 Score=98.88 Aligned_cols=62 Identities=26% Similarity=0.289 Sum_probs=29.7
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 187 KYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 187 ~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|..|..|+|+||+++..+..+++++||++|+|++.+| ..|+||||-|...|+.+|+-+|+++
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~ 108 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSK 108 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhc
Confidence 3344444444444444444444444444444444444 2344444444444444444444443
No 92
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.81 E-value=4e-09 Score=65.89 Aligned_cols=37 Identities=38% Similarity=0.562 Sum_probs=22.9
Q ss_pred HHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 212 LLENG-AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 212 Ll~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
||++| ++++.+|..|.||||+|+..|+.++|++|+++
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~ 38 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN 38 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHC
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC
Confidence 67888 99999999999999999999999999999964
No 93
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.73 E-value=2.9e-08 Score=61.51 Aligned_cols=44 Identities=30% Similarity=0.380 Sum_probs=32.2
Q ss_pred CCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHH
Q 025512 168 PSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLL 213 (251)
Q Consensus 168 ~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll 213 (251)
.+..+++++|+..+ .+++.+|.+|+||||+|+..|+.+++++||
T Consensus 11 ~g~~~~~~~Ll~~~--~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 11 SGNLEIVKLLLEHG--ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp TT-HHHHHHHHHTT--SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred hCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 34466777777776 678999999999999999999999999996
No 94
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.71 E-value=3.8e-08 Score=86.14 Aligned_cols=91 Identities=25% Similarity=0.348 Sum_probs=81.6
Q ss_pred HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 159 ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 159 ~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
..+.+++...+..+++++++.++++..++..|..|.|+||.|+..++..++++|++.||.+...|..|.||-.-|.+.|.
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence 34455555566678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 025512 239 HDVLKLLEKDA 249 (251)
Q Consensus 239 ~~iv~~Ll~~~ 249 (251)
.+++.||...+
T Consensus 980 ~dlaayle~rq 990 (1004)
T KOG0782|consen 980 PDLAAYLESRQ 990 (1004)
T ss_pred chHHHHHhhhh
Confidence 99999998754
No 95
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.69 E-value=1.4e-08 Score=94.68 Aligned_cols=59 Identities=34% Similarity=0.452 Sum_probs=46.5
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 191 DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 191 ~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
..|.|+||.|+..|...++++|++.|+++|..|..|+||||.+...|+...+.+|+++.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~ 712 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRG 712 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccc
Confidence 34678888888888888888888888888888888888888888888888777776643
No 96
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.63 E-value=1.2e-07 Score=88.37 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=77.3
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC---
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN--- 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~--- 215 (251)
..+..+++.+++++..+..+.+..+++...+..+++++|+..| ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 96 ~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G--advn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~ 173 (664)
T PTZ00322 96 VGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG--ADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQC 173 (664)
T ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCc
Confidence 5677778888888876665555555555556677888888887 67889999999999999999999999999999
Q ss_pred ----CCCCCCCCCCCCcHHHHHH
Q 025512 216 ----GAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 216 ----Gad~~~~d~~G~TpL~~A~ 234 (251)
|++++..+..|.+|+..+.
T Consensus 174 ~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 174 HFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred ccccCCCCCccccCCCCccchhh
Confidence 9999999998988877664
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.59 E-value=3e-08 Score=90.16 Aligned_cols=82 Identities=23% Similarity=0.365 Sum_probs=67.0
Q ss_pred CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCC-CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 025512 152 TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWND-KDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPI 230 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 230 (251)
+.++.++....++.....-..++++|+++| +++..+|+ .|+||||.|.+.|+++|+-+||.+|+.+.++|++|.+||
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhG--idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl 123 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHG--IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL 123 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcC--ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence 334444444444444555567899999998 66777775 699999999999999999999999999999999999999
Q ss_pred HHHHH
Q 025512 231 DVAKL 235 (251)
Q Consensus 231 ~~A~~ 235 (251)
.+-++
T Consensus 124 q~~~r 128 (1267)
T KOG0783|consen 124 QFLSR 128 (1267)
T ss_pred HHHhh
Confidence 99877
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.44 E-value=2.6e-07 Score=49.72 Aligned_cols=25 Identities=28% Similarity=0.553 Sum_probs=23.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+||||+|++.|+.++|++|+++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 5899999999999999999999864
No 99
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.32 E-value=5.7e-07 Score=84.48 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=69.2
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+|..+++-.+++........+...+.+.++++.|+..|...+-..-.+-|-.||++|+..||.+.++.|++.|.|
T Consensus 838 ~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsd 917 (2131)
T KOG4369|consen 838 RVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSD 917 (2131)
T ss_pred hHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccch
Confidence 34555555666655555555555555566667777777776663322222234566777777777777777777777777
Q ss_pred CCCCC-CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 219 VTLQN-MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+|.+- .+-+|+|-+|+..|+.++|.+|+.+
T Consensus 918 iNaqIeTNrnTaltla~fqgr~evv~lLLa~ 948 (2131)
T KOG4369|consen 918 INAQIETNRNTALTLALFQGRPEVVFLLLAA 948 (2131)
T ss_pred hccccccccccceeeccccCcchHHHHHHHH
Confidence 77654 4556777777777777777777654
No 100
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.29 E-value=6.1e-07 Score=84.32 Aligned_cols=64 Identities=27% Similarity=0.219 Sum_probs=31.4
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQ-NMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
+++..+|+.|.+||.+|+-.||..+|+.|+++.++++.+ |+.+.|+|.+||..|..++|++|+.
T Consensus 781 aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~ 845 (2131)
T KOG4369|consen 781 ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLN 845 (2131)
T ss_pred ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHH
Confidence 344444555555555555555555555555555554443 2444455555555555555554443
No 101
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=2.9e-06 Score=71.30 Aligned_cols=52 Identities=31% Similarity=0.390 Sum_probs=24.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 197 LHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 197 Lh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|..||+.|..+.|++|++.|.+||..|+...+||.+|+..||.++|++|+++
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLen 91 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLEN 91 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHc
Confidence 3444444444444444444444444444444444444444444444444443
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.22 E-value=1.7e-06 Score=47.60 Aligned_cols=25 Identities=40% Similarity=0.635 Sum_probs=23.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+||||+|+..|+.+|+++|+++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g 25 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG 25 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc
Confidence 5899999999999999999999853
No 103
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.92 E-value=1.2e-05 Score=75.51 Aligned_cols=77 Identities=29% Similarity=0.393 Sum_probs=66.5
Q ss_pred CCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 168 PSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 168 ~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
.....+.++|+..+ +++|..|..|+||||.+...|+...+.+|+++||+.++.+.+|++||++|....+.+++-+|.
T Consensus 666 ~~~~~~~e~ll~~g--a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 666 TGDSGAVELLLQNG--ADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cchHHHHHHHHhcC--CcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHHHHh
Confidence 34445666777776 568999999999999999999999999999999999999999999999998887777776554
No 104
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.72 E-value=7.4e-05 Score=66.07 Aligned_cols=79 Identities=24% Similarity=0.378 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHH
Q 025512 167 DPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA--VTLQNMDGKTPIDVAKLNSQHDVLKL 244 (251)
Q Consensus 167 ~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad--~~~~d~~G~TpL~~A~~~g~~~iv~~ 244 (251)
..++.++.+.-..+| .+-.++.+-+|.||+|+..|+-++|+|+|++|-. ++..|..|.|+||-|+..++..++++
T Consensus 876 ~~D~~klqE~h~~gg---~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~ 952 (1004)
T KOG0782|consen 876 SSDLMKLQETHLNGG---SLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQL 952 (1004)
T ss_pred hccHHHHHHHHhcCC---ceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHH
Confidence 334444444444554 2344677889999999999999999999999853 56778999999999999999999999
Q ss_pred HHhC
Q 025512 245 LEKD 248 (251)
Q Consensus 245 Ll~~ 248 (251)
|++.
T Consensus 953 lvda 956 (1004)
T KOG0782|consen 953 LVDA 956 (1004)
T ss_pred HHhc
Confidence 9874
No 105
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.72 E-value=6.5e-05 Score=38.75 Aligned_cols=29 Identities=45% Similarity=0.638 Sum_probs=25.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 025512 192 KDNTALHYAAGYGRKECVALLLENGAAVT 220 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~ 220 (251)
.|.||||+|+..++.+++++|+++|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 37899999999999999999999988764
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.58 E-value=3.2e-05 Score=72.66 Aligned_cols=64 Identities=31% Similarity=0.399 Sum_probs=37.7
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTL------QNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~------~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
..++.+|..||||||||+.+||..++..|++.|++... ..-.|.|+-.+|..+|+..+.-+|-+
T Consensus 632 ~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 632 VAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred cccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 34555666666666666666666666666655544332 22346666666666666666666544
No 107
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.58 E-value=5.1e-05 Score=65.67 Aligned_cols=58 Identities=21% Similarity=0.319 Sum_probs=54.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 191 DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 191 ~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.++.-++++|++.|.+..++.+.-.|.|++.+|.+.+|+||+|+..|+.+++++|++.
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~ 561 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNA 561 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHH
Confidence 4466789999999999999999999999999999999999999999999999999874
No 108
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.56 E-value=0.00018 Score=62.64 Aligned_cols=62 Identities=31% Similarity=0.298 Sum_probs=54.4
Q ss_pred cccCCCCchH------HHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 187 KYWNDKDNTA------LHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 187 ~~~d~~G~Tp------Lh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
..+|.+|.|+ ||-.++.|+.+.+-.||..||++|..+ ..|.||||+|++.|+..-+++|.-+
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY 189 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY 189 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc
Confidence 4456666654 899999999999999999999999988 7899999999999999999988754
No 109
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.56 E-value=0.00029 Score=61.43 Aligned_cols=44 Identities=34% Similarity=0.601 Sum_probs=41.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 191 DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 191 ~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
.--.|+||+|+..|..+||.+||+.|+|+..+|..|+||+.++.
T Consensus 428 ~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 428 YLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 33579999999999999999999999999999999999999987
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.46 E-value=8e-05 Score=70.11 Aligned_cols=85 Identities=14% Similarity=0.228 Sum_probs=61.6
Q ss_pred HHHHHhcCCCcHHHHHHHHhc-CCCccccccCCCCchHHHHHHHcCCHHHHHHH-HHCCCCCCCCCCCCCcHHHHHHHcC
Q 025512 160 RMAKIKEDPSLKPILDEIESG-GPSAMMKYWNDKDNTALHYAAGYGRKECVALL-LENGAAVTLQNMDGKTPIDVAKLNS 237 (251)
Q Consensus 160 ~~~~~~~~~~~~~~l~~L~~~-~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~L-l~~Gad~~~~d~~G~TpL~~A~~~g 237 (251)
++..+.....+..+++.+++. + ..-...|.+|.--+|+++.. +.+++-+| +-.|..++++|..||||||||+..|
T Consensus 576 lllhL~a~~lyawLie~~~e~~~--~~~~eld~d~qgV~hfca~l-g~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G 652 (975)
T KOG0520|consen 576 LLLHLLAELLYAWLIEKVIEWAG--SGDLELDRDGQGVIHFCAAL-GYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRG 652 (975)
T ss_pred HHHHHHHHHhHHHHHHHHhcccc--cCchhhcccCCChhhHhhhc-CCceeEEEEeecccccccccCCCCcccchHhhcC
Confidence 344445555667777777774 3 22234577788888885554 45555454 4569999999999999999999999
Q ss_pred CHHHHHHHHh
Q 025512 238 QHDVLKLLEK 247 (251)
Q Consensus 238 ~~~iv~~Ll~ 247 (251)
+..++..|++
T Consensus 653 ~e~l~a~l~~ 662 (975)
T KOG0520|consen 653 REKLVASLIE 662 (975)
T ss_pred HHHHHHHHHH
Confidence 9999988874
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.28 E-value=0.00089 Score=56.70 Aligned_cols=58 Identities=26% Similarity=0.305 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPI 230 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 230 (251)
.+.++.|+.-| .+||.+|.....||.+|+..||..+|++|+++||-...-..+|...+
T Consensus 49 ~d~v~~LVetg--vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 49 VDRVRYLVETG--VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred HHHHHHHHHhC--CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 45566667665 67899999999999999999999999999999997765556666543
No 112
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.61 E-value=0.016 Score=54.13 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=72.4
Q ss_pred hHHHHHHHhcCC----CCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 025512 139 PSMSHMMESLTN----PTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLE 214 (251)
Q Consensus 139 ~~~~~ll~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~ 214 (251)
|.++.+++.... .+..+..+.....++.+.+..+++++|+..... + .-+|-+|+..|..++|++++.
T Consensus 39 ~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~--~-------gdALL~aI~~~~v~~VE~ll~ 109 (822)
T KOG3609|consen 39 PLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE--E-------GDALLLAIAVGSVPLVELLLV 109 (822)
T ss_pred HHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc--c-------chHHHHHHHHHHHHHHHHHHh
Confidence 555555554433 455566666666667777888888888876411 1 457888999999999999998
Q ss_pred CCCCC----------CCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 215 NGAAV----------TLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 215 ~Gad~----------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+-... ...-..+.|||.+|+..++.+|+++|++.
T Consensus 110 ~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 110 HFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR 153 (822)
T ss_pred cccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence 73332 12235678999999999999999999874
No 113
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.52 E-value=0.0042 Score=31.44 Aligned_cols=25 Identities=40% Similarity=0.655 Sum_probs=22.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.|.||+|+|+..++.+++++|+++.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4789999999999999999998753
No 114
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=96.52 E-value=0.005 Score=54.96 Aligned_cols=61 Identities=28% Similarity=0.381 Sum_probs=47.8
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVT 220 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~ 220 (251)
+....|+++..++..+..+| +-.+ +++-.+|..|+|+|.||-..|.-+|+..|+++|+..+
T Consensus 661 grt~LHLa~~~gnVvl~QLL--iWyg---~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 661 GRTALHLAARKGNVVLAQLL--IWYG---VDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred CcchhhhhhhhcchhHHHHH--HHhC---ccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 35566777766666555555 3333 6778899999999999999999999999999998644
No 115
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.44 E-value=0.0039 Score=55.05 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=44.5
Q ss_pred hHHHHHHHcCCHHHHHHH--HHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 195 TALHYAAGYGRKECVALL--LENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 195 TpLh~Aa~~g~~~~v~~L--l~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
-|||+++.....+-...+ .+.+..++.+|..|+||||+|+..|+..++++|+.+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a 77 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA 77 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc
Confidence 469999988877655553 334678899999999999999999999999988874
No 116
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.20 E-value=0.0079 Score=56.06 Aligned_cols=61 Identities=18% Similarity=0.124 Sum_probs=54.9
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 250 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 250 (251)
..++|++|.-|+++|++|..+.+.+++++|+++...+ ..+|.+|+..|..++|++|+.|+.
T Consensus 52 ~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~ 112 (822)
T KOG3609|consen 52 KLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFV 112 (822)
T ss_pred ccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhccc
Confidence 3688999999999999999999999999999987665 348999999999999999999863
No 117
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=94.16 E-value=0.15 Score=39.56 Aligned_cols=72 Identities=14% Similarity=0.067 Sum_probs=53.2
Q ss_pred CCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 025512 151 PTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN 223 (251)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d 223 (251)
++..+.++.+....+......+.+.+|+..| .+.|...|..|.+++.+|-..|+.++|+.|.+.-.+-...+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg-~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRG-VAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM 76 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccC-cccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc
Confidence 4455555555555555555566777777776 36788899999999999999999999999999855544444
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.17 E-value=0.57 Score=30.75 Aligned_cols=46 Identities=17% Similarity=0.236 Sum_probs=27.1
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 196 ALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 196 pLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
-|..|...|+.++++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 456666666666666666543 111 2356666666666666666553
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=88.24 E-value=1.5 Score=35.19 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=28.8
Q ss_pred CHHHHHHHHHCC-CCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 205 RKECVALLLENG-AAVTLQ---NMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 205 ~~~~v~~Ll~~G-ad~~~~---d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
...+++++|.+| ++||.+ -..|.|-|+-|...++.+++.+|+++.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~G 277 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYG 277 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcC
Confidence 456666677766 455542 356677777777777777777776654
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=84.26 E-value=1.6 Score=38.90 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=35.8
Q ss_pred HHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 206 KECVALLLENGAAVTL------QNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 206 ~~~v~~Ll~~Gad~~~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
...+++|.+++.+.|. .+..-.|+||+|+..|...||.+|+++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee 452 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE 452 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh
Confidence 5678999999887754 345577999999999999999998875
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=84.20 E-value=2.4 Score=32.90 Aligned_cols=47 Identities=21% Similarity=0.221 Sum_probs=41.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 196 ALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 196 pLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
-|.+|+..|....|.-.+++|.+++. +.|..|+...|..|+.+++++
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~q 192 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIRQ 192 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhcC
Confidence 46789999999999999999998864 799999999999999998763
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=83.28 E-value=2.8 Score=33.67 Aligned_cols=56 Identities=23% Similarity=0.263 Sum_probs=44.3
Q ss_pred HHHhcCCCcHHHHHHHHhcCCCcccccc---CCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 162 AKIKEDPSLKPILDEIESGGPSAMMKYW---NDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 162 ~~~~~~~~~~~~l~~L~~~~~~~~v~~~---d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
-.+..+.....+|++++..|- ++||.. -+.|.|-|--|...+..+++.+||++||-
T Consensus 221 Y~LS~h~a~~kvL~~Fi~~Gl-v~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 221 YLLSEHSASYKVLEYFINRGL-VDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHHhhcCCcHHHHHHHHhccc-cccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 345567777888888887763 455532 46699999999999999999999999994
No 123
>smart00105 ArfGap Putative GTP-ase activating proteins for the small GTPase, ARF. Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.
Probab=56.46 E-value=12 Score=26.46 Aligned_cols=34 Identities=21% Similarity=0.130 Sum_probs=28.3
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+++|+..| ++.+++++..| |..++++.+.
T Consensus 37 g~his~VkSl~md~w~~~~i~~~~~~G-N~~~n~~~e~ 73 (112)
T smart00105 37 GVHISKVRSLTLDTWTEEELRLLQKGG-NENANSIWES 73 (112)
T ss_pred CCCcCeeeecccCCCCHHHHHHHHHhh-hHHHHHHHHh
Confidence 3588999999887 67778888888 9989998886
No 124
>smart00727 STI1 Heat shock chaperonin-binding motif.
Probab=44.66 E-value=17 Score=20.32 Aligned_cols=20 Identities=20% Similarity=0.527 Sum_probs=15.0
Q ss_pred ccCCChhHHHHHHHHhcCch
Q 025512 63 GLLNDPSIKELAEQIAKDPA 82 (251)
Q Consensus 63 sl~~dp~~~~la~~i~~n~~ 82 (251)
+.+.||.+..+...+.+||.
T Consensus 6 ~~l~~P~~~~~l~~~~~nP~ 25 (41)
T smart00727 6 LRLQNPQVQSLLQDMQQNPD 25 (41)
T ss_pred HHHcCHHHHHHHHHHHHCHH
Confidence 45667888888888887884
No 125
>PF01412 ArfGap: Putative GTPase activating protein for Arf; InterPro: IPR001164 This entry describes a family of small GTPase activating proteins, for example ARF1-directed GTPase-activating protein, the cycle control GTPase activating protein (GAP) GCS1 which is important for the regulation of the ADP ribosylation factor ARF, a member of the Ras superfamily of GTP-binding proteins []. The GTP-bound form of ARF is essential for the maintenance of normal Golgi morphology, it participates in recruitment of coat proteins which are required for budding and fission of membranes. Before the fusion with an acceptor compartment the membrane must be uncoated. This step required the hydrolysis of GTP associated to ARF. These proteins contain a characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) which displays some similarity to the C4-type GATA zinc finger. The ARFGAP domain display no obvious similarity to other GAP proteins. The 3D structure of the ARFGAP domain of the PYK2-associated protein beta has been solved []. It consists of a three-stranded beta-sheet surrounded by 5 alpha helices. The domain is organised around a central zinc atom which is coordinated by 4 cysteines. The ARFGAP domain is clearly unrelated to the other GAP proteins structures which are exclusively helical. Classical GAP proteins accelerate GTPase activity by supplying an arginine finger to the active site. The crystal structure of ARFGAP bound to ARF revealed that the ARFGAP domain does not supply an arginine to the active site which suggests a more indirect role of the ARFGAP domain in the GTPase hydrolysis []. The Rev protein of human immunodeficiency virus type 1 (HIV-1) facilitates nuclear export of unspliced and partly-spliced viral RNAs []. Rev contains an RNA-binding domain and an effector domain; the latter is believed to interact with a cellular cofactor required for the Rev response and hence HIV-1 replication. Human Rev interacting protein (hRIP) specifically interacts with the Rev effector. The amino acid sequence of hRIP is characterised by an N-terminal, C-4 class zinc finger motif.; GO: 0008060 ARF GTPase activator activity, 0008270 zinc ion binding, 0032312 regulation of ARF GTPase activity; PDB: 2P57_A 2CRR_A 2OWA_B 3O47_B 3DWD_A 1DCQ_A 2CRW_A 3MDB_D 3FEH_A 3LJU_X ....
Probab=43.31 E-value=14 Score=26.30 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=25.2
Q ss_pred cccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 56 FDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 56 ~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
+++|+|+|+..| ++.++.++.+| |...+++.+.
T Consensus 48 ~~is~VkSi~~d~w~~~ev~~~~~~G-N~~~n~~~e~ 83 (116)
T PF01412_consen 48 VHISRVKSITMDNWSPEEVQRMREGG-NKRANSIWEA 83 (116)
T ss_dssp TTT--EEETTTS---HHHHHHHHHSH-HHHHHHHHTT
T ss_pred ccchhccccccCCCCHHHHHHHHHHC-hHHHHHHHHc
Confidence 488999999887 67778888888 8888888876
No 126
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=40.52 E-value=6.2 Score=36.22 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=37.6
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 200 AAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 200 Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
++..+....+-.|++.|+.++.+|..|.+|+|+++..|...|.+.++.
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~ 450 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLN 450 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhh
Confidence 445555566677788888888889999999999998888888876654
No 127
>KOG2857 consensus Predicted MYND Zn-finger protein/hormone receptor interactor [Transcription]
Probab=38.59 E-value=1.2e+02 Score=22.58 Aligned_cols=45 Identities=18% Similarity=0.389 Sum_probs=29.3
Q ss_pred HHHhcCchHHHHHHHHHhhhcCCCCCCCCCccchhchHHHHHHHHcCCcchHHHHHhhhh
Q 025512 75 EQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNA 134 (251)
Q Consensus 75 ~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ 134 (251)
+.+.+||+.+++++.+..+.+ -...|.++|+.+.++..++..-+.
T Consensus 91 rsll~dp~Lr~Li~sid~~~n---------------~~kel~aamqeelfvefadailq~ 135 (157)
T KOG2857|consen 91 RSLLEDPHLRNLIESIDELLN---------------IMKELVAAMQEELFVEFADAILQQ 135 (157)
T ss_pred HHHHhCHHHHHHHHHHHHHhh---------------HHHHHHHHhcchHHHHHHHHHHHh
Confidence 455668888888888777766 345566677766666655544443
No 128
>KOG0703 consensus Predicted GTPase-activating protein [Signal transduction mechanisms]
Probab=38.06 E-value=22 Score=29.69 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=32.2
Q ss_pred CCCCccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 51 AAPNPFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 51 ~~~~~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
+.--++|+|+|.|+.+| ++.++.+.++| |..-|.++|.
T Consensus 55 HR~lg~hiSkVkSv~LD~W~~eqv~~m~~~G-N~~an~~~ea 95 (287)
T KOG0703|consen 55 HRSLGVHISKVKSVTLDEWTDEQVDFMISMG-NAKANSYYEA 95 (287)
T ss_pred cccccchhheeeeeeccccCHHHHHHHHHHc-chhhhhhccc
Confidence 34556799999999888 88899999999 9888888876
No 129
>PF07218 RAP1: Rhoptry-associated protein 1 (RAP-1); InterPro: IPR009864 This family consists of several rhoptry-associated protein 1 (RAP-1) sequences which appear to be specific to Plasmodium falciparum [].
Probab=32.19 E-value=77 Score=29.23 Aligned_cols=12 Identities=17% Similarity=0.232 Sum_probs=5.2
Q ss_pred CCCCCCCCCcccc
Q 025512 1 MASPPTKDAPADK 13 (251)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (251)
||+++.. .|+++
T Consensus 123 ~a~~~~~-k~~~p 134 (782)
T PF07218_consen 123 MANQNEE-KTSKP 134 (782)
T ss_pred hcCcccc-CCCCC
Confidence 4444444 44433
No 130
>PF12200 DUF3597: Domain of unknown function (DUF3597); InterPro: IPR022016 This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 126 and 281 amino acids in length. The function of this domain is unknown. The structure of this domain has been found to contain five helices with a long flexible loop between helices one and two. ; PDB: 2GQB_A.
Probab=30.26 E-value=69 Score=23.26 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=19.6
Q ss_pred CCccccccc---------cccCCChhHHHHHHHHhcCchHHHHHHH
Q 025512 53 PNPFDFSAM---------SGLLNDPSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 53 ~~~~~~s~~---------~sl~~dp~~~~la~~i~~n~~f~~i~~~ 89 (251)
...||+..+ +.|-...+|..|++-++-|.++..-.|+
T Consensus 46 ~~~VDV~avL~~~a~~~~~~LnWrtSIVDLlKlLglDSSl~aRkeL 91 (127)
T PF12200_consen 46 LSQVDVAAVLDALAAKNGQKLNWRTSIVDLLKLLGLDSSLAARKEL 91 (127)
T ss_dssp -SSEE-HHHHHHHHHHHSS---TTT-HHHHHHHT----SHHHHHHH
T ss_pred CCcccHHHHHHHHHHhcccccccHHHHHHHHHHcCCCCCHHHHHHH
Confidence 567777654 2333348999999999989988766655
No 131
>COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
Probab=28.16 E-value=45 Score=28.49 Aligned_cols=37 Identities=16% Similarity=0.035 Sum_probs=29.8
Q ss_pred CCCccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 52 APNPFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 52 ~~~~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
..-.+|++.|+|++.| ++.+..+++.| |..++.+++.
T Consensus 51 RsLGvhiS~VKSitLD~wt~~~l~~m~~gG-N~~a~~~~e~ 90 (319)
T COG5347 51 RSLGVHISKVKSLTLDNWTEEELRRMEVGG-NSNANRFYEK 90 (319)
T ss_pred hccccceeeeeeeecccCCHHHHHHHHHhc-chhhhhHhcc
Confidence 3445899999999998 67777777777 9989988875
No 132
>PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor []. The domain is found in four copies in the ryanodine receptor. The function of this domain is unknown.; PDB: 4ETV_A 3RQR_A 4ETT_A 4ERT_A 4ESU_A 4ETU_A 4ERV_A 3NRT_E.
Probab=21.78 E-value=96 Score=21.21 Aligned_cols=31 Identities=32% Similarity=0.516 Sum_probs=15.0
Q ss_pred CCCCCccccccccccCCChhHHHHHHHHhcCchH
Q 025512 50 GAAPNPFDFSAMSGLLNDPSIKELAEQIAKDPAF 83 (251)
Q Consensus 50 g~~~~~~~~s~~~sl~~dp~~~~la~~i~~n~~f 83 (251)
|+.+.|+|.|. ....+.+..+.+.+++|-+-
T Consensus 1 ~y~P~Pvdts~---v~L~~~l~~~~E~lAen~H~ 31 (94)
T PF02026_consen 1 GYKPKPVDTSQ---VTLPPELEELIEKLAENEHD 31 (94)
T ss_dssp C-----B-GTT-------HHHHHHHHHHHHHHHH
T ss_pred CCcCCCcCcCC---eecCHHHHHHHHHHHHHHHH
Confidence 45678999984 66777777888877766543
No 133
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.11 E-value=89 Score=24.80 Aligned_cols=45 Identities=22% Similarity=0.330 Sum_probs=34.8
Q ss_pred CCchHHHHHHHcCCHHHHH-HHHHCCCC----CCCCCCCCCcHHHHHHHc
Q 025512 192 KDNTALHYAAGYGRKECVA-LLLENGAA----VTLQNMDGKTPIDVAKLN 236 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~-~Ll~~Gad----~~~~d~~G~TpL~~A~~~ 236 (251)
+-..|||-|+.-++.+++- ++++..+. +|-.|.+|-.+|.+|-..
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 3456999999999998876 46666544 466788999999998754
Done!