Query 025512
Match_columns 251
No_of_seqs 323 out of 2447
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:50:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.2E-22 4.3E-27 156.1 15.1 144 80-248 14-158 (169)
2 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-19 4.2E-24 151.9 17.3 184 55-248 76-281 (301)
3 3lvq_E ARF-GAP with SH3 domain 99.8 4.4E-20 1.5E-24 164.8 15.0 183 55-249 57-263 (497)
4 1dcq_A PYK2-associated protein 99.8 5.1E-20 1.7E-24 152.5 14.0 182 55-248 51-260 (278)
5 4gpm_A Engineered protein OR26 99.8 4.9E-20 1.7E-24 141.6 12.8 109 139-249 18-126 (169)
6 4b93_B Ankyrin repeat domain-c 99.8 1.5E-19 5E-24 149.1 9.8 137 87-248 70-207 (269)
7 1d9s_A Cyclin-dependent kinase 99.8 2.8E-19 9.6E-24 132.0 9.8 125 106-248 8-133 (136)
8 3jue_A Arfgap with coiled-coil 99.8 9.8E-19 3.4E-23 150.1 14.0 105 139-248 214-323 (368)
9 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.9E-18 1E-22 131.1 15.2 148 70-248 17-168 (169)
10 1awc_B Protein (GA binding pro 99.8 2.2E-18 7.4E-23 129.7 12.9 137 82-246 14-153 (153)
11 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.7E-18 9.1E-23 118.4 11.8 87 158-249 5-91 (93)
12 2jab_A H10-2-G3; HER2, darpin, 99.8 2E-18 6.9E-23 127.4 11.5 105 139-248 28-135 (136)
13 3v31_A Ankyrin repeat family A 99.8 2.7E-18 9.4E-23 130.8 12.4 139 82-248 15-157 (167)
14 3v30_A DNA-binding protein rfx 99.8 3.1E-18 1E-22 131.2 12.4 144 81-248 13-157 (172)
15 2rfm_A Putative ankyrin repeat 99.8 3.5E-18 1.2E-22 133.2 12.1 149 69-248 37-189 (192)
16 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.5E-18 8.6E-23 130.2 10.1 106 139-249 51-160 (162)
17 4hbd_A KN motif and ankyrin re 99.8 3.1E-18 1.1E-22 141.5 10.6 138 108-250 120-274 (276)
18 1bi7_B P16INK4A, MTS1, multipl 99.8 2E-18 6.8E-23 130.4 8.5 108 139-249 26-134 (156)
19 1bd8_A P19INK4D CDK4/6 inhibit 99.7 9.4E-18 3.2E-22 126.3 11.6 107 139-248 49-155 (156)
20 3twr_A Tankyrase-2; ankyrin re 99.7 9.7E-18 3.3E-22 127.5 9.8 124 106-250 38-164 (165)
21 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.8E-17 6.2E-22 119.8 10.5 106 139-249 16-124 (126)
22 2rfm_A Putative ankyrin repeat 99.7 2.2E-17 7.5E-22 128.7 11.1 123 107-249 32-157 (192)
23 1yyh_A HN1;, notch 1, ankyrin 99.7 4.5E-17 1.6E-21 132.5 13.3 172 70-249 60-246 (253)
24 1ihb_A P18-INK4C(INK6), cyclin 99.7 2.7E-17 9.2E-22 124.5 11.0 107 140-249 20-126 (162)
25 2y1l_E Darpin-8.4; hydrolase-i 99.7 4.2E-17 1.4E-21 124.6 12.2 106 139-249 28-136 (169)
26 1bd8_A P19INK4D CDK4/6 inhibit 99.7 5.4E-17 1.8E-21 122.1 12.6 107 139-248 16-123 (156)
27 3aji_A 26S proteasome non-ATPa 99.7 7.2E-17 2.5E-21 129.0 13.5 74 172-247 153-226 (231)
28 3utm_A Tankyrase-1; tankyrase, 99.7 1.4E-16 4.8E-21 134.7 16.0 93 155-249 211-303 (351)
29 2f8y_A Notch homolog 1, transl 99.7 1.3E-16 4.6E-21 126.8 15.0 110 139-250 106-215 (223)
30 3f6q_A Integrin-linked protein 99.7 8.2E-18 2.8E-22 129.8 7.4 124 106-249 35-161 (179)
31 3twr_A Tankyrase-2; ankyrin re 99.7 4.1E-17 1.4E-21 124.0 11.2 90 155-249 42-131 (165)
32 3c5r_A BARD-1, BRCA1-associate 99.7 2.1E-18 7.3E-23 127.3 3.8 125 105-249 5-132 (137)
33 1oy3_D Transcription factor in 99.7 2.9E-17 1E-21 134.9 11.0 91 154-249 157-248 (282)
34 3hra_A Ankyrin repeat family p 99.7 6.8E-17 2.3E-21 126.5 12.4 106 139-248 86-200 (201)
35 3ljn_A Hypothetical protein; a 99.7 3.9E-17 1.3E-21 139.6 11.7 110 139-248 154-266 (364)
36 2etb_A Transient receptor pote 99.7 2.2E-17 7.5E-22 134.4 9.5 161 69-249 45-244 (256)
37 2vge_A RELA-associated inhibit 99.7 1.2E-17 4E-22 134.4 7.7 125 107-248 18-145 (229)
38 2rfa_A Transient receptor pote 99.7 1.2E-16 4.2E-21 127.9 13.3 140 82-249 15-181 (232)
39 1ycs_B 53BP2, P53BP2; ankyrin 99.7 8E-18 2.7E-22 136.0 6.2 105 139-248 51-161 (239)
40 3v31_A Ankyrin repeat family A 99.7 1E-16 3.4E-21 122.1 11.6 106 139-249 17-125 (167)
41 3aaa_C Myotrophin, protein V-1 99.7 6.2E-17 2.1E-21 117.2 9.8 76 171-248 20-95 (123)
42 3f6q_A Integrin-linked protein 99.7 1.2E-16 4.2E-21 123.1 12.0 90 155-249 39-128 (179)
43 1awc_B Protein (GA binding pro 99.7 8.9E-17 3.1E-21 120.7 10.9 106 139-249 16-123 (153)
44 2pnn_A Transient receptor pote 99.7 5.9E-17 2E-21 133.2 10.7 159 70-248 57-255 (273)
45 1ycs_B 53BP2, P53BP2; ankyrin 99.7 2.9E-17 9.9E-22 132.7 8.7 78 170-249 49-126 (239)
46 1k1a_A B-cell lymphoma 3-encod 99.7 1.7E-16 5.8E-21 127.5 13.0 105 139-248 93-205 (241)
47 3jxi_A Vanilloid receptor-rela 99.7 4.1E-17 1.4E-21 133.0 9.3 123 107-249 90-248 (260)
48 1yyh_A HN1;, notch 1, ankyrin 99.7 2.2E-17 7.6E-22 134.4 7.4 137 108-249 66-213 (253)
49 2zgd_A 3 repeat synthetic anky 99.7 9.1E-17 3.1E-21 114.2 9.7 86 156-246 25-110 (110)
50 3hra_A Ankyrin repeat family p 99.7 2.1E-16 7.3E-21 123.6 12.7 143 80-249 15-168 (201)
51 1s70_B 130 kDa myosin-binding 99.7 1.8E-16 6.2E-21 131.5 12.6 177 68-249 41-255 (299)
52 2rfa_A Transient receptor pote 99.7 1.4E-16 4.8E-21 127.5 11.3 154 70-248 40-219 (232)
53 3c5r_A BARD-1, BRCA1-associate 99.7 4.7E-17 1.6E-21 120.0 7.8 93 152-249 7-99 (137)
54 3aji_A 26S proteasome non-ATPa 99.7 6.6E-17 2.2E-21 129.3 9.2 150 69-249 42-195 (231)
55 3t8k_A Uncharacterized protein 99.7 6.4E-17 2.2E-21 126.1 8.8 128 108-248 36-176 (186)
56 1oy3_D Transcription factor in 99.7 3.8E-16 1.3E-20 128.2 13.9 157 70-249 12-215 (282)
57 1n11_A Ankyrin; clathrin, BAND 99.7 1.4E-16 4.8E-21 139.4 11.6 73 172-246 325-397 (437)
58 3v30_A DNA-binding protein rfx 99.7 1.5E-16 5.3E-21 121.6 10.4 91 154-249 35-125 (172)
59 2dzn_A Probable 26S proteasome 99.7 5E-16 1.7E-20 123.8 13.7 160 82-246 14-194 (228)
60 2dzn_A Probable 26S proteasome 99.7 3.1E-16 1.1E-20 125.0 12.1 137 108-248 81-227 (228)
61 4hbd_A KN motif and ankyrin re 99.7 1.5E-16 5E-21 131.4 10.5 107 139-247 125-237 (276)
62 3ljn_A Hypothetical protein; a 99.7 2.2E-16 7.4E-21 135.0 11.9 92 155-249 138-234 (364)
63 2f8y_A Notch homolog 1, transl 99.7 9.5E-17 3.2E-21 127.7 9.0 149 69-248 27-180 (223)
64 3b7b_A Euchromatic histone-lys 99.7 8.9E-16 3.1E-20 123.1 14.6 174 68-249 12-200 (237)
65 3b7b_A Euchromatic histone-lys 99.7 4E-16 1.4E-20 125.2 12.5 134 108-246 86-230 (237)
66 2etb_A Transient receptor pote 99.7 3E-16 1E-20 127.6 11.9 151 70-248 5-203 (256)
67 1ikn_D Protein (I-kappa-B-alph 99.7 4.6E-17 1.6E-21 130.9 6.9 149 70-249 48-207 (236)
68 2xai_A ASB-9, ankyrin repeat a 99.7 4.2E-16 1.4E-20 127.4 12.6 104 139-248 83-188 (261)
69 3aaa_C Myotrophin, protein V-1 99.7 3.8E-16 1.3E-20 112.9 11.0 99 139-245 21-122 (123)
70 3kea_A K1L; tropism, ANK repea 99.7 2.2E-16 7.4E-21 131.0 10.9 74 171-247 108-182 (285)
71 2fo1_E LIN-12 protein; beta-ba 99.7 3.4E-16 1.2E-20 134.6 12.4 107 139-249 252-369 (373)
72 2vge_A RELA-associated inhibit 99.7 2.4E-16 8.3E-21 126.7 10.7 104 144-249 4-110 (229)
73 3deo_A Signal recognition part 99.7 1.3E-16 4.5E-21 123.6 8.7 123 107-250 41-183 (183)
74 2xai_A ASB-9, ankyrin repeat a 99.7 7.6E-16 2.6E-20 125.8 13.2 146 71-248 7-156 (261)
75 4g8k_A 2-5A-dependent ribonucl 99.7 1.1E-15 3.7E-20 129.3 14.4 60 184-248 264-323 (337)
76 2jab_A H10-2-G3; HER2, darpin, 99.7 4.3E-16 1.5E-20 114.8 10.4 86 159-249 18-103 (136)
77 1d9s_A Cyclin-dependent kinase 99.7 7.3E-17 2.5E-21 118.9 5.6 90 154-249 11-101 (136)
78 4b93_B Ankyrin repeat domain-c 99.7 3.2E-16 1.1E-20 129.0 9.7 105 140-249 68-175 (269)
79 2l6b_A NR1C; ankyrin, consensu 99.7 3.9E-16 1.3E-20 111.5 8.9 92 153-249 7-98 (115)
80 3d9h_A CDNA FLJ77766, highly s 99.7 1.1E-15 3.6E-20 126.7 12.7 135 109-249 102-245 (285)
81 3ehr_A Osteoclast-stimulating 99.7 6.1E-17 2.1E-21 129.1 5.0 106 139-249 87-196 (222)
82 1wdy_A 2-5A-dependent ribonucl 99.7 1.2E-15 4.2E-20 125.0 12.9 171 70-249 75-276 (285)
83 3d9h_A CDNA FLJ77766, highly s 99.6 1.5E-15 5.2E-20 125.8 13.4 149 69-249 61-213 (285)
84 4g8k_A 2-5A-dependent ribonucl 99.6 1.1E-15 3.8E-20 129.2 12.6 127 106-249 164-296 (337)
85 1k1a_A B-cell lymphoma 3-encod 99.6 2.7E-15 9.1E-20 120.5 14.0 155 69-249 11-173 (241)
86 1ikn_D Protein (I-kappa-B-alph 99.6 3E-16 1E-20 126.1 8.2 126 106-249 41-174 (236)
87 1n11_A Ankyrin; clathrin, BAND 99.6 9.8E-16 3.4E-20 134.0 12.0 142 80-249 222-367 (437)
88 3ui2_A Signal recognition part 99.6 3E-16 1E-20 127.2 8.1 102 141-248 61-182 (244)
89 3eu9_A Huntingtin-interacting 99.6 1.3E-15 4.6E-20 121.8 10.9 137 108-249 85-233 (240)
90 3kea_A K1L; tropism, ANK repea 99.6 8E-16 2.8E-20 127.5 8.4 164 81-249 42-218 (285)
91 2fo1_E LIN-12 protein; beta-ba 99.6 5E-15 1.7E-19 127.3 13.5 179 69-249 127-336 (373)
92 3deo_A Signal recognition part 99.6 2.4E-15 8.3E-20 116.4 10.0 77 169-248 55-132 (183)
93 1wdy_A 2-5A-dependent ribonucl 99.6 7.9E-15 2.7E-19 120.1 13.5 141 80-248 15-170 (285)
94 3utm_A Tankyrase-1; tankyrase, 99.6 2.7E-15 9.3E-20 126.7 10.9 91 154-249 57-147 (351)
95 3jxi_A Vanilloid receptor-rela 99.6 4.1E-15 1.4E-19 121.1 11.6 94 154-247 45-161 (260)
96 3ui2_A Signal recognition part 99.6 3.2E-15 1.1E-19 121.2 10.8 85 162-249 49-134 (244)
97 3ehr_A Osteoclast-stimulating 99.6 3.8E-15 1.3E-19 118.7 9.6 89 155-248 73-162 (222)
98 2pnn_A Transient receptor pote 99.6 4.4E-15 1.5E-19 121.9 9.9 92 152-248 98-215 (273)
99 1n0q_A 3ANK, 3 ankyrin repeats 99.6 3.4E-15 1.1E-19 102.6 7.6 58 192-249 1-58 (93)
100 1s70_B 130 kDa myosin-binding 99.6 7.7E-15 2.6E-19 121.7 10.9 122 106-247 36-160 (299)
101 3t8k_A Uncharacterized protein 99.6 1.5E-15 5.1E-20 118.3 5.3 75 171-247 55-141 (186)
102 3eu9_A Huntingtin-interacting 99.6 2.4E-14 8.2E-19 114.4 11.9 135 109-248 19-165 (240)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.6 2.2E-14 7.7E-19 103.3 10.2 87 158-249 5-91 (126)
104 1bi7_B P16INK4A, MTS1, multipl 99.6 1.8E-15 6.1E-20 114.1 3.9 88 155-248 12-100 (156)
105 1sw6_A Regulatory protein SWI6 99.5 4.6E-15 1.6E-19 125.4 6.1 106 139-249 145-306 (327)
106 1sw6_A Regulatory protein SWI6 99.5 4.9E-15 1.7E-19 125.2 5.2 76 170-247 109-188 (327)
107 3jue_A Arfgap with coiled-coil 99.5 5.7E-14 2E-18 120.5 11.8 188 56-249 80-291 (368)
108 1dcq_A PYK2-associated protein 99.5 7.3E-14 2.5E-18 115.4 10.2 83 166-249 139-228 (278)
109 2zgd_A 3 repeat synthetic anky 99.5 7.5E-14 2.6E-18 99.0 7.3 64 186-249 17-80 (110)
110 3lvq_E ARF-GAP with SH3 domain 99.5 1.4E-13 4.8E-18 122.7 9.3 77 171-249 145-230 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.5 7.5E-14 2.6E-18 99.5 6.1 62 188-249 4-65 (115)
112 2b0o_E UPLC1; arfgap, structur 99.4 3.2E-13 1.1E-17 112.8 10.3 80 167-249 161-249 (301)
113 2aja_A Ankyrin repeat family p 99.4 2.5E-14 8.5E-19 123.1 -0.1 106 139-248 106-221 (376)
114 2aja_A Ankyrin repeat family p 99.3 3.2E-13 1.1E-17 116.2 0.2 125 108-248 101-247 (376)
115 2llw_A Heat shock protein STI1 75.0 1.3 4.4E-05 27.8 1.6 27 59-89 11-37 (71)
116 3dwd_A ADP-ribosylation factor 71.1 1.9 6.4E-05 31.2 1.8 34 55-89 72-108 (147)
117 2crr_A Stromal membrane-associ 70.3 1.8 6E-05 31.2 1.6 34 55-89 63-99 (141)
118 2owa_A Arfgap-like finger doma 69.9 2.3 7.9E-05 30.5 2.1 35 54-89 69-106 (138)
119 2lnm_A Protein TIC 40, chlorop 67.7 2.7 9.1E-05 25.5 1.8 18 64-81 17-34 (62)
120 2iqj_A Stromal membrane-associ 64.5 2.1 7E-05 30.6 0.9 34 55-89 61-97 (134)
121 3sub_A ADP-ribosylation factor 62.1 4.1 0.00014 29.9 2.1 34 55-89 56-92 (163)
122 2crw_A ARF GAP 3, ADP-ribosyla 46.7 8.4 0.00029 27.9 1.6 34 55-89 63-100 (149)
123 2olm_A Nucleoporin-like protei 42.4 10 0.00034 27.2 1.5 30 59-89 62-94 (140)
124 2p57_A GTPase-activating prote 40.8 13 0.00045 26.7 1.9 34 55-89 71-108 (144)
125 3o47_A ADP-ribosylation factor 37.3 15 0.0005 30.2 2.0 34 55-89 71-107 (329)
126 3zrh_A Ubiquitin thioesterase 35.2 1.1E+02 0.0039 26.0 6.9 24 224-247 67-90 (454)
127 3lju_X ARF-GAP with dual PH do 32.6 15 0.00053 30.9 1.4 33 56-89 68-103 (386)
128 2llv_A Heat shock protein STI1 32.0 8.6 0.00029 23.9 -0.3 26 63-92 18-43 (71)
129 2qsf_X RAD23, UV excision repa 24.8 73 0.0025 23.5 3.7 31 63-93 27-59 (171)
130 3pk1_B Apoptosis regulator BAX 23.2 32 0.0011 17.8 1.0 15 64-78 3-17 (34)
131 1gp8_A Protein (scaffolding pr 20.5 77 0.0026 17.0 2.2 17 197-213 17-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=1.2e-22 Score=156.14 Aligned_cols=144 Identities=23% Similarity=0.303 Sum_probs=115.2
Q ss_pred CchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHH
Q 025512 80 DPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIE 158 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~ 158 (251)
+..+..+..+|+.|++ ++ .+..|++.++.+..... . ..+..+++.+++++..+..+
T Consensus 14 ~G~~~~v~~Ll~~Gad--------vn~~d~~g~t~l~~a~~~~~-----------~----~~~~~ll~~gad~~~~d~~g 70 (169)
T 4gpm_A 14 NGNKDRVKDLIENGAD--------VNASDSDGRTPLHHAAENGH-----------K----EVVKLLISKGADVNAKDSDG 70 (169)
T ss_dssp TTCHHHHHHHHHTTCC--------TTCCCTTSCCHHHHHHHTTC-----------H----HHHHHHHHTTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHCCCC--------CCCcCCCCCCHHHHHHHcCC-----------H----HHHHHHHhcccchhhhccCC
Confidence 5567788888888888 66 67888888877766522 2 45566677777777665444
Q ss_pred HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 159 ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 159 ~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
.+...++...+..+++++|+..| +++|.+|.+|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~g--advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKG--ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCc--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 33333333344567777888876 6789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC
Q 025512 239 HDVLKLLEKD 248 (251)
Q Consensus 239 ~~iv~~Ll~~ 248 (251)
.+|+++|+++
T Consensus 149 ~~iv~~Ll~~ 158 (169)
T 4gpm_A 149 EEVVKLLEKQ 158 (169)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHC
Confidence 9999999985
No 2
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.2e-19 Score=151.95 Aligned_cols=184 Identities=24% Similarity=0.302 Sum_probs=130.4
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCccchhchHHHHHHHHcCCcc-------
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQF------- 124 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~------- 124 (251)
.+++|+++|+..| ++.+.++.+++ |..+++++|. .+.......-.+..+.......+........+
T Consensus 76 g~~is~v~sl~lD~w~~~~l~~~~~~G-N~~~n~i~E~---~l~~~~~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~~~~ 151 (301)
T 2b0o_E 76 GVRFSRMQSLTLDLLGPSELLLALNMG-NTSFNEVMEA---QLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPE 151 (301)
T ss_dssp CTTTCCEEETTTSCCCHHHHHHHHHCC-HHHHHHHHTT---TCCSSSCSCCCTTCCHHHHHHHHHHHHTSCTTSCCCC-C
T ss_pred CCCcccccccCcCCCCHHHHHHHHHcC-CHHHHHHHHH---hhhhccCCCCCCcccHHHHHHHHHHHHHhhhhhcccCch
Confidence 3588999999888 77788888888 7778887764 22210000000112222223333332222111
Q ss_pred ---hHHHHHhhhhccCChHHHHHHHhcCCCCc---------cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCC
Q 025512 125 ---MTMAERLGNALMQDPSMSHMMESLTNPTK---------KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDK 192 (251)
Q Consensus 125 ---~~~a~~~~~~ll~~~~~~~ll~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~ 192 (251)
+..+...++. ..+..+++.+.+++. .+....++++...+....+++++|+..+ ++++.+|..
T Consensus 152 ~~~L~~A~~~g~~----~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--advn~~d~~ 225 (301)
T 2b0o_E 152 PQRLWTAICNRDL----LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHLDAKAAD 225 (301)
T ss_dssp HHHHHHHHHTTCH----HHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS--SCTTCCCTT
T ss_pred HHHHhhhhhccCH----HHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC--CCCCCCCCC
Confidence 1122223333 467777888887654 3455677777665567788899898887 678999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 193 DNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 193 G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+|+++|+++
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ 281 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA 281 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999874
No 3
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=4.4e-20 Score=164.80 Aligned_cols=183 Identities=25% Similarity=0.308 Sum_probs=133.8
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc--cchhchHHHHHHHHcCCcc-----
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ--FDTTQYYSTMQQVMQNPQF----- 124 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~--~~~~g~~~l~~~l~~~~~~----- 124 (251)
.+|+|+++|+..| ++.++++..++ |..+|.++|. .+.. .....|. .+.......+........+
T Consensus 57 g~~~s~vrsl~ld~w~~~~~~l~~~~G-N~~an~i~E~---~lp~--~~~~kP~~~s~~~~re~fIraky~~~~f~~~~~ 130 (497)
T 3lvq_E 57 GVRFSRMQSLTLDLLGPSELLLALNMG-NTSFNEVMEA---QLPS--HGGPKPSAESDMGTRRDYIMAKYVEHRFARRCT 130 (497)
T ss_dssp CTTTCCEEETTTSCCCGGGGTTTTTCC-HHHHHHHHTT---TCCS--SSCSCCCTTCCHHHHHHHHHHHHTTCTTSCCCC
T ss_pred ccccceecccccCCCCHHHHHHHHHHh-hHHHHHHHHh---hccc--ccCCCCCCcCcHHHHHHHHHHHhhccccccccc
Confidence 3589999999888 77778888888 7778887764 2210 0001121 2222222233332222211
Q ss_pred -----hHHHHHhhhhccCChHHHHHHHhcCCCCcc---------CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccC
Q 025512 125 -----MTMAERLGNALMQDPSMSHMMESLTNPTKK---------DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWN 190 (251)
Q Consensus 125 -----~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d 190 (251)
+..+...++. ..+..+++.+.+++.. +....++++.....+..+++++|+..| +++|.+|
T Consensus 131 ~~~~~L~~A~~~g~~----~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g--a~vn~~d 204 (497)
T 3lvq_E 131 PEPQRLWTAICNRDL----LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHLDAKA 204 (497)
T ss_dssp -CHHHHHHHHHHTCH----HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS--CCTTCCC
T ss_pred ccHHHHHHHHhccCH----HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC--CCCCccC
Confidence 2233344444 6788889999887543 566677776656677788888888887 7889999
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 191 DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 191 ~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
..|+||||+|+..|+.++|++|+++||+++.+|..|+||||+|+..|+.+|+++|+++.
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999864
No 4
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=5.1e-20 Score=152.55 Aligned_cols=182 Identities=23% Similarity=0.273 Sum_probs=126.9
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc--cchhchHHHHHHHHcCCc------
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ--FDTTQYYSTMQQVMQNPQ------ 123 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~--~~~~g~~~l~~~l~~~~~------ 123 (251)
.+|+|+|+|+..| ++.+.++..++ |..++++++.. +. .+....|. .+.......+........
T Consensus 51 g~~is~v~s~~~d~~~~~~l~~~~~~G-N~~~n~i~e~~---l~--~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~ 124 (278)
T 1dcq_A 51 GVHYSRMQSLTLDVLGTSELLLAKNIG-NAGFNEIMECC---LP--SEDPVKPNPGSDMIARKDYITAKYMERRYARKKH 124 (278)
T ss_dssp CTTTCCEEETTTSCCCGGGGHHHHHSC-HHHHHHHHTTT---CC--SSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCS
T ss_pred CCCcceeeeeecCCCCHHHHHHHHHcC-cHHHHHHHHhh---CC--hhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccc
Confidence 3588999999887 77788888888 88888887642 21 11110111 111111111111111000
Q ss_pred --chH------HHHHhhhhccCChHHHHHHHhcCCCC---------ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccc
Q 025512 124 --FMT------MAERLGNALMQDPSMSHMMESLTNPT---------KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMM 186 (251)
Q Consensus 124 --~~~------~a~~~~~~ll~~~~~~~ll~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v 186 (251)
... .+...++. ..+..++..+.+.+ ..+....+.++...+....+++++|+..| +++
T Consensus 125 ~~~~~~l~~l~~a~~~~d~----~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--a~i 198 (278)
T 1dcq_A 125 ADTAAKLHSLCEAVKTRDI----FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GNL 198 (278)
T ss_dssp SSHHHHHHHHHHHHHTTCH----HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SCT
T ss_pred cccchhhhhhhhHhhhccc----HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC--CCc
Confidence 000 11111222 34555667666643 34567778888776667788888888887 678
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 187 KYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 187 ~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 199 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 199 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.83 E-value=4.9e-20 Score=141.60 Aligned_cols=109 Identities=28% Similarity=0.367 Sum_probs=87.8
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.+++++..+..+.+...+........++.+|+..+ .+++.+|.+|+||||+|+..|+.++|++|+++|++
T Consensus 18 ~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad 95 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG--ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 95 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC
Confidence 5566666666666655544443333344444556666777776 67899999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++.+|..|+||||+|+..|+.++|++|+++.
T Consensus 96 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g 126 (169)
T 4gpm_A 96 VNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999863
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=149.10 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=77.6
Q ss_pred HHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHh
Q 025512 87 AEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIK 165 (251)
Q Consensus 87 ~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 165 (251)
..++..|++ ++ .+.+|++.++.+...+. . ..+..+++.+++++.....+.......
T Consensus 70 ~~Ll~~Gad--------vn~~d~~G~TpLh~A~~~g~-----------~----~~v~~Ll~~~a~~~~~~~~g~t~l~~a 126 (269)
T 4b93_B 70 AKVPASGLG--------VNVTSQDGSSPLHVAALHGR-----------A----DLIPLLLKHGANAGARNADQAVPLHLA 126 (269)
T ss_dssp -----CCCC--------TTCCCTTSCCHHHHHHHTTC-----------T----THHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHCCCC--------CCCcCCCCCCHHHHHHHcCc-----------H----HHHHHHHhcCCCcCccCCCCCCccccc
Confidence 345555665 45 56667777666654421 1 344445555555544333222222222
Q ss_pred cCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 166 EDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 166 ~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
......+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+.++|++|
T Consensus 127 ~~~~~~~~~~~Ll~~g--~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~L 204 (269)
T 4b93_B 127 CQQGHFQVVKCLLDSN--AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELL 204 (269)
T ss_dssp HHHTCHHHHHHHHHTT--CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred cccChHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Confidence 2223344555555554 45666677777777777777777777777777777777777777777777777777777777
Q ss_pred HhC
Q 025512 246 EKD 248 (251)
Q Consensus 246 l~~ 248 (251)
+++
T Consensus 205 l~~ 207 (269)
T 4b93_B 205 LLH 207 (269)
T ss_dssp HHT
T ss_pred HHC
Confidence 664
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.79 E-value=2.8e-19 Score=132.02 Aligned_cols=125 Identities=15% Similarity=0.227 Sum_probs=99.2
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCcc
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAM 185 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~ 185 (251)
.+..+.+.++.+... +.. ..+..+++.+.+++..+..+.+...++.. ...+++++|+..+ .+
T Consensus 8 ~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~ 69 (136)
T 1d9s_A 8 LGGSSDAGLATAAAR-----------GQV----ETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG--AE 69 (136)
T ss_dssp CCCCCSCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT--CC
T ss_pred CCCCCccHHHHHHHc-----------CCH----HHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC--CC
Confidence 455666676666655 222 45556666666666655444444444445 6778888888876 67
Q ss_pred ccccCCC-CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 186 MKYWNDK-DNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 186 v~~~d~~-G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++
T Consensus 70 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 8889999 99999999999999999999999999999999999999999999999999999975
No 8
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=9.8e-19 Score=150.14 Aligned_cols=105 Identities=18% Similarity=0.246 Sum_probs=87.3
Q ss_pred hHHHHHHHhcCCCCccC-----cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKD-----QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLL 213 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll 213 (251)
..+..+++.+.+++..+ ....+.++.. ...+++++|+..+ ++++..|..|+||||+|+..|+.++|++|+
T Consensus 214 ~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~---g~~~iv~~LL~~G--advn~~d~~G~TpLh~A~~~g~~~~v~~LL 288 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGGQDNATPLIQATAA---NSLLACEFLLQNG--ANVNQADSAGRGPLHHATILGHTGLACLFL 288 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccccccCCCCHHHHHHHC---CCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 46777788888877554 3445555544 4467777788876 678889999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 214 ENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 214 ~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++|++++.+|..|+||||+|+..|+.+|+++|+..
T Consensus 289 ~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 289 KRGADLGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999999999999999999999864
No 9
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.79 E-value=2.9e-18 Score=131.14 Aligned_cols=148 Identities=22% Similarity=0.243 Sum_probs=111.8
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhc
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESL 148 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~ 148 (251)
.+..|.+.+ .+..+..++..+.+ ++ .+..|++.++.+... +.. ..+..+++.+
T Consensus 17 ~l~~A~~~g---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g 70 (169)
T 2y1l_E 17 KLLEAARAG---RDDEVRILMANGAD--------VNAEDASGWTPLHLAAFN-----------GHL----EIVEVLLKNG 70 (169)
T ss_dssp HHHHHHHHT---CHHHHHHHHHTTCC--------TTCCCTTSCCHHHHHHHT-----------TCH----HHHHHHHHTT
T ss_pred hHHHHHHcC---CHHHHHHHHHCCCC--------CCCCCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcC
Confidence 344444444 45556666677766 44 566777777776655 222 4556666777
Q ss_pred CCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q 025512 149 TNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMD 225 (251)
Q Consensus 149 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~ 225 (251)
.+++..+. ...+.++.. +..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 71 ~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 145 (169)
T 2y1l_E 71 ADVNAVDHAGMTPLRLAALF---GHLEIVEVLLKNG--ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKF 145 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCccCCCCCCHHHHHHHc---CCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 66665543 444555444 4467777788776 678888999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhC
Q 025512 226 GKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 226 G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|+||||+|+..|+.+++++|+++
T Consensus 146 g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 146 GKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHc
Confidence 99999999999999999999985
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=2.2e-18 Score=129.66 Aligned_cols=137 Identities=19% Similarity=0.162 Sum_probs=104.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCCCccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC---cHH
Q 025512 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD---QIE 158 (251)
Q Consensus 82 ~f~~i~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~---~~~ 158 (251)
.+..+..+++.+.+ .+.+..|.+.++.+... +.. ..+..+++.+.+++..+ ...
T Consensus 14 ~~~~v~~Ll~~g~~--------~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~t~ 70 (153)
T 1awc_B 14 QDDEVRILMANGAP--------FTTDWLGTSPLHLAAQY-----------GHF----STTEVLLRAGVSRDARTKVDRTP 70 (153)
T ss_dssp CHHHHHHHHHHTCC--------CCCCTTCCCHHHHHHHH-----------TCH----HHHHHHHTTTCCTTCCCTTCCCH
T ss_pred CHHHHHHHHHcCCC--------CCcCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcCCCCCCCCCCCCCH
Confidence 45666667777765 34556677777666554 222 34555566666655443 445
Q ss_pred HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 159 ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 159 ~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
.+.++..+ ..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 71 L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 71 LHMAASEG---HANIVEVLLKHG--ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHHHHT---CHHHHHHHHTTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHcC---hHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 55555544 456777788876 6788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 025512 239 HDVLKLLE 246 (251)
Q Consensus 239 ~~iv~~Ll 246 (251)
.+++++|.
T Consensus 146 ~~i~~~L~ 153 (153)
T 1awc_B 146 EDLAEILQ 153 (153)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999983
No 11
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=2.7e-18 Score=118.36 Aligned_cols=87 Identities=31% Similarity=0.426 Sum_probs=75.8
Q ss_pred HHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 025512 158 EERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 237 (251)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 237 (251)
..+.++..++ .+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 5 ~L~~A~~~~~---~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 5 PLHLAARNGH---LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp HHHHHHHHTC---HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCC---HHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4445554443 56777777776 678899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCC
Q 025512 238 QHDVLKLLEKDA 249 (251)
Q Consensus 238 ~~~iv~~Ll~~~ 249 (251)
+.+++++|+++.
T Consensus 80 ~~~~~~~Ll~~g 91 (93)
T 1n0q_A 80 HLEVVKLLLEAG 91 (93)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 999999999864
No 12
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.78 E-value=2e-18 Score=127.37 Aligned_cols=105 Identities=27% Similarity=0.284 Sum_probs=86.5
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 102 (136)
T 2jab_A 28 DEVRILMANGADVNAKDEYGLTPLYLATAHG---HLEIVEVLLKNG--ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH 102 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45555666666655543 44555555554 366777777776 67888999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 103 g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 103 GADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999999999999999999986
No 13
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.77 E-value=2.7e-18 Score=130.81 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=106.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC---cH
Q 025512 82 AFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD---QI 157 (251)
Q Consensus 82 ~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~---~~ 157 (251)
.+..+..++..+.+ ++ .+..|++.++.+... +.. ..+..+++.+.+++..+ ..
T Consensus 15 ~~~~v~~ll~~~~~--------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~t 71 (167)
T 3v31_A 15 EMLYLATRIEQENV--------INHTDEEGFTPLMWAAAH-----------GQI----AVVEFLLQNGADPQLLGKGRES 71 (167)
T ss_dssp CHHHHHHHHHHSSC--------TTCCCTTSCCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCTTCCC
T ss_pred CHHHHHHHHHcCCC--------cCCCCCCCCCHHHHHHHC-----------CCH----HHHHHHHHcCCCCCCcCCCCCc
Confidence 45566666666655 44 566777777776655 222 45566666666665443 44
Q ss_pred HHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 025512 158 EERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 237 (251)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 237 (251)
..+.++... ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 72 ~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 72 ALSLACSKG---YTDIVKMLLDCG--VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHHHHT---CHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHcC---CHHHHHHHHHCC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 555555554 456667777766 678889999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhC
Q 025512 238 QHDVLKLLEKD 248 (251)
Q Consensus 238 ~~~iv~~Ll~~ 248 (251)
+.+++++|+++
T Consensus 147 ~~~~~~~L~~~ 157 (167)
T 3v31_A 147 YRSVQQVIESH 157 (167)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999875
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.77 E-value=3.1e-18 Score=131.18 Aligned_cols=144 Identities=19% Similarity=0.244 Sum_probs=106.5
Q ss_pred chHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHH
Q 025512 81 PAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEE 159 (251)
Q Consensus 81 ~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~ 159 (251)
..+..+..++..+... .+ .+..|++.++.+... +.. ..+..+++.+.+++..+..+.
T Consensus 13 g~~~~v~~ll~~~~~~-------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~ 70 (172)
T 3v30_A 13 GELDQLKEHLRKGDNL-------VNKPDERGFTPLIWASAF-----------GEI----ETVRFLLEWGADPHILAKERE 70 (172)
T ss_dssp TCHHHHHHHHTTCSGG-------GGCCCTTSCCHHHHHHHT-----------TCH----HHHHHHHHHTCCTTCCCTTCC
T ss_pred CCHHHHHHHHHcCccc-------ccCCCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcCCCchhhcccCC
Confidence 3455555565554331 22 456677777766654 222 456667777777766544333
Q ss_pred HHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Q 025512 160 RMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQH 239 (251)
Q Consensus 160 ~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~ 239 (251)
+...++...+..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 71 SALSLASTGGYTDIVGLLLERD--VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcH
Confidence 3333333344567788888876 67888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC
Q 025512 240 DVLKLLEKD 248 (251)
Q Consensus 240 ~iv~~Ll~~ 248 (251)
+++++|+++
T Consensus 149 ~~~~~L~~~ 157 (172)
T 3v30_A 149 KVQQVIENH 157 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.77 E-value=3.5e-18 Score=133.23 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=109.8
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHh
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMES 147 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~ 147 (251)
..+..|...+.-. .+..++..+.+ ++ .+..|++.++.+... +.. ..+..+++.
T Consensus 37 t~L~~A~~~g~~~---~v~~Ll~~~~~--------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~ 90 (192)
T 2rfm_A 37 TPLMVACMLGMEN---AIDKLVENFDK--------LEDKDIEGSTALIWAVKN-----------NRL----GIAEKLLSK 90 (192)
T ss_dssp CHHHHHHHHTCGG---GHHHHHHHHCC--------TTCCCTTSCCHHHHHHHT-----------TCH----HHHHHHHHH
T ss_pred CHHHHHHHcCCHH---HHHHHHHhccc--------cccccccCccHHHHHHHc-----------CCH----HHHHHHHHC
Confidence 3455555555322 33344555655 44 566677777776655 222 456666777
Q ss_pred cCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 025512 148 LTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM 224 (251)
Q Consensus 148 ~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~ 224 (251)
+.+++..+ ....+.++..+ ..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 165 (192)
T 2rfm_A 91 GSNVNTKDFSGKTPLMWSIIFG---YSEMSYFLLEHG--ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165 (192)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred CCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 77766554 44555555544 456777777776 67888999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.|+||||+|+..|+.+++++|+++
T Consensus 166 ~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 166 TGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCcHHHHHHHHhc
Confidence 999999999999999999999875
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.76 E-value=2.5e-18 Score=130.20 Aligned_cols=106 Identities=24% Similarity=0.273 Sum_probs=86.0
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++..+ ..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++
T Consensus 51 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 125 (162)
T 1ihb_A 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAG---FLDTLQTLLEFQ--ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 125 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 35555566666665543 44455555544 466777777776 67888999999999999999999999999999
Q ss_pred CCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAA-VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|++ ++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 126 g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 126 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 998 6999999999999999999999999999864
No 17
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.75 E-value=3.1e-18 Score=141.51 Aligned_cols=138 Identities=20% Similarity=0.213 Sum_probs=101.9
Q ss_pred hhchHHHHHHHHcCCc-chHHHHHhhhhcc------------CChHHHHHHHhcCCCCcc---CcHHHHHHHHhcCCCcH
Q 025512 108 TTQYYSTMQQVMQNPQ-FMTMAERLGNALM------------QDPSMSHMMESLTNPTKK---DQIEERMAKIKEDPSLK 171 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~-~~~~a~~~~~~ll------------~~~~~~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~ 171 (251)
..|+.++++.|++.++ .++..+..|...+ ....+..+++.+...+.. +....+.++..+ ..
T Consensus 120 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g---~~ 196 (276)
T 4hbd_A 120 SHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHG---RV 196 (276)
T ss_dssp HTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTT---CH
T ss_pred HCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC---CH
Confidence 4556666666666655 3333322222110 013555667777665554 445555555544 46
Q ss_pred HHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 025512 172 PILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 250 (251)
Q Consensus 172 ~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 250 (251)
+++++|+..| ++++.+|..|+||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|+++.-
T Consensus 197 ~~v~~Ll~~g--ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 197 DVVKALLACE--ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHHHHhCC--CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 7777788876 6789999999999999999999999999999 899999999999999999999999999999998653
No 18
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.75 E-value=2e-18 Score=130.43 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=84.8
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCch-HHHHHHHcCCHHHHHHHHHCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNT-ALHYAAGYGRKECVALLLENGA 217 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~T-pLh~Aa~~g~~~~v~~Ll~~Ga 217 (251)
..+..+++.+.+++..+..+.+...++. .+..+++++|+..+ .+++.+|..|+| |||+|+..|+.++|++|+++|+
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g--~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga 102 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG--AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA 102 (156)
T ss_dssp HHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT--CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCC
Confidence 3444444445444444333322222222 45678888888886 678899999999 9999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 218 AVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 218 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 103 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 103 RLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 99999999999999999999999999999864
No 19
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.75 E-value=9.4e-18 Score=126.32 Aligned_cols=107 Identities=15% Similarity=0.237 Sum_probs=85.6
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.+.+++..+..+.+...++...+..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++ ++
T Consensus 49 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~ 125 (156)
T 1bd8_A 49 AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG--ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD 125 (156)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC
Confidence 4555666667666655443333333333334567777788876 67888999999999999999999999999999 99
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++.+|..|+||||+|+..|+.+++++|+++
T Consensus 126 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 126 LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999999999986
No 20
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.73 E-value=9.7e-18 Score=127.48 Aligned_cols=124 Identities=25% Similarity=0.234 Sum_probs=93.2
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcH---HHHHHHHhcCCCcHHHHHHHHhcCC
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQI---EERMAKIKEDPSLKPILDEIESGGP 182 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~L~~~~~ 182 (251)
.+..+++.++.+... +.. ..+..+++.+.+++..+.. ..+.++.. ...+++++|+..+
T Consensus 38 ~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g- 98 (165)
T 3twr_A 38 IEGRQSTPLHFAAGY-----------NRV----SVVEYLLQHGADVHAKDKGGLVPLHNACSY---GHYEVAELLVKHG- 98 (165)
T ss_dssp TTTTCCCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT-
T ss_pred cccCCCCHHHHHHHc-----------ChH----HHHHHHHhcCCCCCccCCCCCCHHHHHHHc---CcHHHHHHHHhCC-
Confidence 455566666665554 222 4566667777776655443 44444443 4566777777776
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 250 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 250 (251)
.+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. ++.+|+++|+++.-
T Consensus 99 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 99 -AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp -CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred -CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 6678889999999999999999999999999999999999999999999777 89999999998753
No 21
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.73 E-value=1.8e-17 Score=119.77 Aligned_cols=106 Identities=27% Similarity=0.373 Sum_probs=84.4
Q ss_pred hHHHHHHHhcCCCCcc---CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKK---DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++.. +....+.++... ..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~---~~~~~~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (126)
T 1n0r_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNG---HLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (126)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC---cHHHHHHHHHcC--CCCcccCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 3444455555554443 344455555544 456777777776 56788899999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 91 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 91 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 9999999999999999999999999999999753
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.73 E-value=2.2e-17 Score=128.69 Aligned_cols=123 Identities=24% Similarity=0.289 Sum_probs=96.9
Q ss_pred chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCC
Q 025512 107 DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPS 183 (251)
Q Consensus 107 ~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~ 183 (251)
+..|++.++.+... +.. ..+..+++.+.+++..+ ....+.++.. +..+++++|+..+
T Consensus 32 d~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g-- 91 (192)
T 2rfm_A 32 DSYNRTPLMVACML-----------GME----NAIDKLVENFDKLEDKDIEGSTALIWAVKN---NRLGIAEKLLSKG-- 91 (192)
T ss_dssp CTTCCCHHHHHHHH-----------TCG----GGHHHHHHHHCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHT--
T ss_pred CCCCCCHHHHHHHc-----------CCH----HHHHHHHHhccccccccccCccHHHHHHHc---CCHHHHHHHHHCC--
Confidence 55677777776655 222 45566666666665544 4444555444 4466777777776
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 92 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (192)
T 2rfm_A 92 SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157 (192)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 568888999999999999999999999999999999999999999999999999999999999863
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.73 E-value=4.5e-17 Score=132.50 Aligned_cols=172 Identities=16% Similarity=0.168 Sum_probs=112.4
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCC-CCCCCCc---cchhchHHHHHHHHcCCc-chHHHHHhhhhc-------cC
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGAN-AEESIPQ---FDTTQYYSTMQQVMQNPQ-FMTMAERLGNAL-------MQ 137 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~-~~~~~~~---~~~~g~~~l~~~l~~~~~-~~~~a~~~~~~l-------l~ 137 (251)
.+..|...+ .+..+..++..+++... +..+... ....++.++++.|++.+. .+...+..+... ..
T Consensus 60 ~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 136 (253)
T 1yyh_A 60 ALHLAARYS---RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV 136 (253)
T ss_dssp HHHHHHHTT---CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh
Confidence 344454443 35556666777766210 0111111 123455566666666543 222111111110 11
Q ss_pred ChHHHHHHHhcCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 025512 138 DPSMSHMMESLTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLE 214 (251)
Q Consensus 138 ~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~ 214 (251)
...+..+++.+.+++..+. ...+.++..+ ..+++++|+..| .+++.+|..|+||||+|+..|+.+++++|++
T Consensus 137 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~---~~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 137 EGMLEDLINSHADVNAVDDLGKSALHWAAAVN---NVDAAVVLLKNG--ANKDMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp SSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 2567777888888776554 4445555444 466777777776 6678889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 215 NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 215 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|++++.+|..|+||||+|+..|+.+|+++|...+
T Consensus 212 ~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 212 HFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred cCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 99999999999999999999999999999998754
No 24
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.73 E-value=2.7e-17 Score=124.47 Aligned_cols=107 Identities=18% Similarity=0.239 Sum_probs=85.4
Q ss_pred HHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCC
Q 025512 140 SMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAV 219 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~ 219 (251)
.+..+++.+.+++..+..+.....++.. +..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 20 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 96 (162)
T 1ihb_A 20 QLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG--ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV 96 (162)
T ss_dssp HHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3334444444444443333333344445 6778888888886 678888999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 220 TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 220 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+.+|..|+||||+|+..|+.+++++|+++.
T Consensus 97 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 97 NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 999999999999999999999999999753
No 25
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.73 E-value=4.2e-17 Score=124.65 Aligned_cols=106 Identities=25% Similarity=0.372 Sum_probs=85.9
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++.. +..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 102 (169)
T 2y1l_E 28 DEVRILMANGADVNAEDASGWTPLHLAAFN---GHLEIVEVLLKNG--ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN 102 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45555566666555443 3344444444 3467777788776 66888899999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 103 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 136 (169)
T 2y1l_E 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999863
No 26
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.72 E-value=5.4e-17 Score=122.12 Aligned_cols=107 Identities=20% Similarity=0.296 Sum_probs=85.1
Q ss_pred hHHHHHHHh-cCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCC
Q 025512 139 PSMSHMMES-LTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGA 217 (251)
Q Consensus 139 ~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Ga 217 (251)
..+..+++. ..+++..+..+.+...+ ...+..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG--ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA 92 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 344444444 11344444444444444 4456677888888876 6788899999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 218 AVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 218 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+++.+|..|+||||+|+..|+.+++++|+++
T Consensus 93 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 93 DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 9999999999999999999999999999976
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.72 E-value=7.2e-17 Score=129.05 Aligned_cols=74 Identities=27% Similarity=0.288 Sum_probs=38.4
Q ss_pred HHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 172 PILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 172 ~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++
T Consensus 153 ~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 153 KMVHILLFYK--ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp HHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 3444444433 3344455555555555555555555555555555555555555555555555555555555544
No 28
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.72 E-value=1.4e-16 Score=134.66 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=83.0
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
+....+.++...+....+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKG--ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 345556666666667788999999887 678889999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCC
Q 025512 235 LNSQHDVLKLLEKDA 249 (251)
Q Consensus 235 ~~g~~~iv~~Ll~~~ 249 (251)
..|+.++|++|+++.
T Consensus 289 ~~~~~~~v~~Ll~~g 303 (351)
T 3utm_A 289 LAGHLQTCRLLLSYG 303 (351)
T ss_dssp HHTCHHHHHHHHHTT
T ss_pred HcCcHHHHHHHHHcC
Confidence 999999999999863
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.72 E-value=1.3e-16 Score=126.80 Aligned_cols=110 Identities=19% Similarity=0.253 Sum_probs=88.9
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
..+..+++.+.+++..+..+.+...++......+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 106 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 106 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG--ANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183 (223)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4667778888877765543333333333334567777778776 67888899999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 250 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~ 250 (251)
++.+|..|+||||+|+..++.+|+++|+++..
T Consensus 184 ~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 184 RDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 99999999999999999999999999998753
No 30
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.72 E-value=8.2e-18 Score=129.75 Aligned_cols=124 Identities=20% Similarity=0.231 Sum_probs=94.3
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCC
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGP 182 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~ 182 (251)
.+..|++.++.+... +.. ..+..+++.+.+++..+. ...+.++.. +..+++++|+..+
T Consensus 35 ~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g- 95 (179)
T 3f6q_A 35 GDDHGFSPLHWACRE-----------GRS----AVVEMLIMRGARINVMNRGDDTPLHLAASH---GHRDIVQKLLQYK- 95 (179)
T ss_dssp CCTTSCCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCTTCCCHHHHHHHT---TCHHHHHHHHHTT-
T ss_pred cCCCCCCHHHHHHHc-----------CcH----HHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcC-
Confidence 456666666666554 222 456666677777665543 344444444 4466777777776
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++.
T Consensus 96 -~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 96 -ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp -CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred -CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 678888999999999999999999999999999999999999999999999999999999998764
No 31
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.72 E-value=4.1e-17 Score=123.99 Aligned_cols=90 Identities=22% Similarity=0.290 Sum_probs=78.1
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
+....+.++..++ .+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 42 g~t~L~~A~~~~~---~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 116 (165)
T 3twr_A 42 QSTPLHFAAGYNR---VSVVEYLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116 (165)
T ss_dssp CCCHHHHHHHTTC---HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCh---HHHHHHHHhcC--CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 3455566555543 67777777776 678889999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCC
Q 025512 235 LNSQHDVLKLLEKDA 249 (251)
Q Consensus 235 ~~g~~~iv~~Ll~~~ 249 (251)
..|+.+++++|+++.
T Consensus 117 ~~~~~~~v~~Ll~~g 131 (165)
T 3twr_A 117 AKGKYEICKLLLQHG 131 (165)
T ss_dssp HTTCHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHcC
Confidence 999999999999863
No 32
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.72 E-value=2.1e-18 Score=127.28 Aligned_cols=125 Identities=22% Similarity=0.261 Sum_probs=86.7
Q ss_pred ccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcC
Q 025512 105 QFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGG 181 (251)
Q Consensus 105 ~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~ 181 (251)
..+..|++.++.+... +.. ..+..+++.+.+++..+. ...+.++.. ...+++++|+..+
T Consensus 5 ~~~~~g~t~L~~A~~~-----------~~~----~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 5 FTNHRGETLLHIASIK-----------GDI----PSVEYLLQNGSDPNVKDHAGWTPLHEACNH---GHLKVVELLLQHK 66 (137)
T ss_dssp CCCTTCCCHHHHHHHH-----------TCH----HHHHHHHHTTCCSCCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcCCCCCcCCCCCCCHHHHHHHc---CCHHHHHHHHHcC
Confidence 3456667777666554 222 445556666666655443 344444443 4456666677765
Q ss_pred CCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 182 PSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 182 ~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.++.
T Consensus 67 --~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 67 --ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp --CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred --CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 567778888899999999999999999999999999988889999999988888888888777653
No 33
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.72 E-value=2.9e-17 Score=134.94 Aligned_cols=91 Identities=23% Similarity=0.284 Sum_probs=76.8
Q ss_pred cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCC-CchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 025512 154 KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDK-DNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDV 232 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~-G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 232 (251)
.+....+.++..+ ..+++++|+..+ .+++..+.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 157 ~g~t~L~~A~~~g---~~~~v~~Ll~~g--~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 157 DGHTPLHVAVIHK---DAEMVRLLRDAG--ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231 (282)
T ss_dssp TSCCHHHHHHHTT---CHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcCHHHHHHHcC---CHHHHHHHHHcC--CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHH
Confidence 3445555555544 466777777776 667777754 9999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC
Q 025512 233 AKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 233 A~~~g~~~iv~~Ll~~~ 249 (251)
|+..|+.+|+++|+++.
T Consensus 232 A~~~~~~~~v~~Ll~~g 248 (282)
T 1oy3_D 232 ALLRPNPILARLLRAHG 248 (282)
T ss_dssp HHTSSCHHHHHHHHHTT
T ss_pred HHHcCCcHHHHHHHHcC
Confidence 99999999999999864
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.72 E-value=6.8e-17 Score=126.47 Aligned_cols=106 Identities=24% Similarity=0.284 Sum_probs=81.9
Q ss_pred hHHHHHHHh-cCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCC-----HHHH
Q 025512 139 PSMSHMMES-LTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGR-----KECV 209 (251)
Q Consensus 139 ~~~~~ll~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~-----~~~v 209 (251)
..+..+++. ..+++..+ ....+.++..+ ..+++++|+..+ ..+++.+|..|+||||+|+..+. .+++
T Consensus 86 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 86 EILAYMLKHATPDLNKHNRYGGNALIPAAEKG---HIDNVKLLLEDG-REDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT---CHHHHHHHHHHC-CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred HHHHHHHhccCcccccccCCCCcHHHHHHHcC---CHHHHHHHHHcC-CCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 344455533 33444433 33445544443 456677777665 24678889999999999999998 9999
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 210 ALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 210 ~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 999999999999999999999999999999999999986
No 35
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.71 E-value=3.9e-17 Score=139.63 Aligned_cols=110 Identities=19% Similarity=0.226 Sum_probs=88.6
Q ss_pred hHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCC---ccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPS---AMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~---~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+++++..+..+.+...++...+..+++++|+..+.. .+++..|..|+||||+|+..|+.++|++|+++
T Consensus 154 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 233 (364)
T 3ljn_A 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233 (364)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 567778888888877654444333333334456777777776521 22888899999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
|++++.+|..|+||||+|+..|+.++|++|+++
T Consensus 234 gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 234 GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 999999999999999999999999999999985
No 36
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.71 E-value=2.2e-17 Score=134.38 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=111.8
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCC----CCCccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHH
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEE----SIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHM 144 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~----~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~l 144 (251)
..+..|........+..+..++..+++...... .....+..|++.++.+... +.. ..+..+
T Consensus 45 t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~-----------g~~----~~v~~L 109 (256)
T 2etb_A 45 TCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK-----------RSL----QCVKLL 109 (256)
T ss_dssp CHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT-----------TCH----HHHHHH
T ss_pred CHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHc-----------CCH----HHHHHH
Confidence 345555555112333444455566666211100 0011235677777776655 222 455666
Q ss_pred HHhcCCCCcc----------------CcHHHHHHHHhcCCCcHHHHHHHHh---cCCCccccccCCCCchHHHHHHH--c
Q 025512 145 MESLTNPTKK----------------DQIEERMAKIKEDPSLKPILDEIES---GGPSAMMKYWNDKDNTALHYAAG--Y 203 (251)
Q Consensus 145 l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~L~~---~~~~~~v~~~d~~G~TpLh~Aa~--~ 203 (251)
++.+++++.. +....+.++.. +..+++++|+. .+ .+++.+|..|+||||+|+. .
T Consensus 110 l~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~g--a~~n~~d~~g~TpLh~A~~~~~ 184 (256)
T 2etb_A 110 VENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT---KQWDVVTYLLENPHQP--ASLEATDSLGNTVLHALVMIAD 184 (256)
T ss_dssp HHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT---TCHHHHHHHHHCSSCC--CCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHcCCCCCcccccccccccccccccCCCCHHHHHHHc---CCHHHHHHHHhccccC--CCcCccCCCCCCHHHHHHHccc
Confidence 6777776654 44555555554 44677777887 55 6789999999999999999 8
Q ss_pred CCHH-------HHHHHHHCCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 204 GRKE-------CVALLLENGAAV-------TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 204 g~~~-------~v~~Ll~~Gad~-------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++.
T Consensus 185 ~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 8888 999999999999 999999999999999999999999999863
No 37
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.71 E-value=1.2e-17 Score=134.42 Aligned_cols=125 Identities=16% Similarity=0.178 Sum_probs=95.7
Q ss_pred chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccc
Q 025512 107 DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMM 186 (251)
Q Consensus 107 ~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v 186 (251)
+..+.+.++.+... +.. ..+..+++.+.+++..+..+.+...++...+..+++++|+..+ .++
T Consensus 18 ~~~~~t~L~~A~~~-----------g~~----~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~~ 80 (229)
T 2vge_A 18 RLNPLVLLLDAALT-----------GEL----EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG--ANV 80 (229)
T ss_dssp TSCHHHHHHHHHHH-----------TCH----HHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT
T ss_pred ccchhHHHHHHHHc-----------CCH----HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCC
Confidence 34455566665544 333 5666677777777665444433333333334567777888876 678
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHhC
Q 025512 187 KYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVA--KLNSQHDVLKLLEKD 248 (251)
Q Consensus 187 ~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A--~~~g~~~iv~~Ll~~ 248 (251)
+.+|..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+| +..|+.+++++|+++
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 8899999999999999999999999999999999997 6999999999 999999999999874
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.71 E-value=1.2e-16 Score=127.88 Aligned_cols=140 Identities=18% Similarity=0.188 Sum_probs=101.3
Q ss_pred hHHHHHHHHHh-hhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCC--------
Q 025512 82 AFNSMAEQLQK-TLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNP-------- 151 (251)
Q Consensus 82 ~f~~i~~~l~~-~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~-------- 151 (251)
.+..+..++.. +.+ ++ .+..|++.++.+...+. . ..+..+++.+.+.
T Consensus 15 ~~~~v~~Ll~~~g~~--------~~~~~~~g~t~L~~A~~~g~-----------~----~~v~~Ll~~~~~~~~~~~~~~ 71 (232)
T 2rfa_A 15 DVQALSKLLKFEGCE--------VHQRGAMGETALHIAALYDN-----------L----EAAMVLMEAAPELVFEPMTSE 71 (232)
T ss_dssp CHHHHHHHHTTTCSC--------TTCCCTTSCCHHHHHHHTTC-----------H----HHHHHHHHHCGGGGGCCCCST
T ss_pred CHHHHHHHHHhcCCC--------cccCCCCCCCHHHHHHHcCC-----------H----HHHHHHHHcCchhcccccccc
Confidence 45555566655 555 44 56777788777766522 1 3444445544433
Q ss_pred CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCC-------------CCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 152 TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWND-------------KDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~-------------~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
+..+....+.++..+ ..+++++|+..+ .+++..+. .|+||||+|+..|+.+++++|+++|++
T Consensus 72 ~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 146 (232)
T 2rfa_A 72 LYEGQTALHIAVINQ---NVNLVRALLARG--ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD 146 (232)
T ss_dssp TTTTCCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCcCHHHHHHHcC---CHHHHHHHHhCC--CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 224455666666554 456777777776 44555544 799999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHH----HHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVL----KLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv----~~Ll~~~ 249 (251)
++.+|..|+||||+|+..|+.+++ ++|+++.
T Consensus 147 ~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g 181 (232)
T 2rfa_A 147 IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYD 181 (232)
T ss_dssp TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC
Confidence 999999999999999999999988 8888753
No 39
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.71 E-value=8e-18 Score=136.04 Aligned_cols=105 Identities=17% Similarity=0.145 Sum_probs=80.3
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++..++ .+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++
T Consensus 51 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~g--a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 125 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPNDEGITALHNAVCAGH---TEIVKFLVQFG--VNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125 (239)
T ss_dssp HHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC---HHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---HHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 34555555565555444 445555555544 56666677765 67888899999999999999999999999999
Q ss_pred CCCCCCCCCCCC-cHHHHH--HHcCCHHHHHHHHhC
Q 025512 216 GAAVTLQNMDGK-TPIDVA--KLNSQHDVLKLLEKD 248 (251)
Q Consensus 216 Gad~~~~d~~G~-TpL~~A--~~~g~~~iv~~Ll~~ 248 (251)
|++++.++..|. ||||+| +..|+.+|+++|+++
T Consensus 126 ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 126 GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 999999997777 999999 778899999999864
No 40
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.70 E-value=1e-16 Score=122.08 Aligned_cols=106 Identities=19% Similarity=0.207 Sum_probs=85.6
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++.. +..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++
T Consensus 17 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (167)
T 3v31_A 17 LYLATRIEQENVINHTDEEGFTPLMWAAAH---GQIAVVEFLLQNG--ADPQLLGKGRESALSLACSKGYTDIVKMLLDC 91 (167)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCCCCCCCHHHHHHHC---CCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 45555555555554443 3444555544 3467777788776 66788899999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 92 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 92 GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999863
No 41
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.70 E-value=6.2e-17 Score=117.17 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 20 ~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 20 LDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 44555555554 45666777777777777777777777777777777777777777777777777777777777765
No 42
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.70 E-value=1.2e-16 Score=123.14 Aligned_cols=90 Identities=24% Similarity=0.272 Sum_probs=77.5
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 234 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 234 (251)
+....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 39 g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 113 (179)
T 3f6q_A 39 GFSPLHWACREG---RSAVVEMLIMRG--ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYAC 113 (179)
T ss_dssp SCCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcC---cHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 344555555443 457777777776 678889999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCC
Q 025512 235 LNSQHDVLKLLEKDA 249 (251)
Q Consensus 235 ~~g~~~iv~~Ll~~~ 249 (251)
..|+.+++++|+++.
T Consensus 114 ~~~~~~~v~~Ll~~g 128 (179)
T 3f6q_A 114 FWGQDQVAEDLVANG 128 (179)
T ss_dssp HTTCHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHCC
Confidence 999999999999864
No 43
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.70 E-value=8.9e-17 Score=120.73 Aligned_cols=106 Identities=23% Similarity=0.207 Sum_probs=85.2
Q ss_pred hHHHHHHHhcCCCC--ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC
Q 025512 139 PSMSHMMESLTNPT--KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG 216 (251)
Q Consensus 139 ~~~~~ll~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G 216 (251)
..+..+++.+.+.+ ..+....+.++..++ .+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|
T Consensus 16 ~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 90 (153)
T 1awc_B 16 DEVRILMANGAPFTTDWLGTSPLHLAAQYGH---FSTTEVLLRAG--VSRDARTKVDRTPLHMAASEGHANIVEVLLKHG 90 (153)
T ss_dssp HHHHHHHHHTCCCCCCTTCCCHHHHHHHHTC---HHHHHHHHTTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCHHHHHHHcCC---HHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC
Confidence 34444555544332 234455666665543 56777778776 567888999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 217 AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 91 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 91 ADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999863
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.70 E-value=5.9e-17 Score=133.16 Aligned_cols=159 Identities=14% Similarity=0.085 Sum_probs=110.0
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCC----CCCCCCccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHH
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGAN----AEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMM 145 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~----~~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll 145 (251)
.+.+|........+..+..++..+++... -.......+..|++.++.+... +.. ..+..++
T Consensus 57 pL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~-----------g~~----~~v~~Ll 121 (273)
T 2pnn_A 57 CLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER-----------RNM----TLVTLLV 121 (273)
T ss_dssp HHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHT-----------TCH----HHHHHHH
T ss_pred HHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHc-----------CCH----HHHHHHH
Confidence 45555544223445555566666654100 0001111344666776666554 222 4555666
Q ss_pred HhcCCCCcc-----------------CcHHHHHHHHhcCCCcHHHHHHHHh---cCCCccccccCCCCchHHHHHHHcCC
Q 025512 146 ESLTNPTKK-----------------DQIEERMAKIKEDPSLKPILDEIES---GGPSAMMKYWNDKDNTALHYAAGYGR 205 (251)
Q Consensus 146 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~L~~---~~~~~~v~~~d~~G~TpLh~Aa~~g~ 205 (251)
+.+++++.. +....+.++..+ ..+++++|+. .+ .+++.+|..|+||||+|+..|+
T Consensus 122 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~g--ad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 122 ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN---QLAIVKFLLQNSWQP--ADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT---CHHHHHHHHHCSSCC--CCTTCCCTTSCCHHHHHHHHCC
T ss_pred HCCCCcCccccccccccccccccccCCCCHHHHHHHcC---CHHHHHHHHhcccCC--CCceeeCCCCCcHHHHHHHccC
Confidence 666666554 345555555544 5677777787 55 7789999999999999999998
Q ss_pred ---------HHHHHHHHHCCCCCC-------CCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 206 ---------KECVALLLENGAAVT-------LQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 206 ---------~~~v~~Ll~~Gad~~-------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.+++++|+++|++++ .+|..|+||||+|+..|+.+||++|+++
T Consensus 197 ~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR 255 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence 899999999999997 5899999999999999999999999975
No 45
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.70 E-value=2.9e-17 Score=132.73 Aligned_cols=78 Identities=28% Similarity=0.269 Sum_probs=71.6
Q ss_pred cHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 170 LKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 170 ~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
..+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++.
T Consensus 49 ~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 126 (239)
T 1ycs_B 49 EFDLVQRIIYEV--DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126 (239)
T ss_dssp CHHHHHHHTSTT--SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 456777777776 578999999999999999999999999999999999999999999999999999999999999863
No 46
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.70 E-value=1.7e-16 Score=127.48 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=74.9
Q ss_pred hHHHHHHHhcC----CCCcc---CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccC-CCCchHHHHHHHcCCHHHHH
Q 025512 139 PSMSHMMESLT----NPTKK---DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWN-DKDNTALHYAAGYGRKECVA 210 (251)
Q Consensus 139 ~~~~~ll~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d-~~G~TpLh~Aa~~g~~~~v~ 210 (251)
..+..+++.+. +.+.. +....+.++..+ ..+++++|+..+ .+++..+ ..|+||||+|+..|+.++++
T Consensus 93 ~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~~~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 167 (241)
T 1k1a_A 93 TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE---CQETVQLLLERG--ADIDAVDIKSGRSPLIHAVENNSLSMVQ 167 (241)
T ss_dssp HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC---CHHHHHHHHHcC--CCcccccccCCCcHHHHHHHcCCHHHHH
Confidence 34555566554 33332 334445444443 356666666665 4566666 67888888888888888888
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 211 LLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 211 ~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 168 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 205 (241)
T 1k1a_A 168 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS 205 (241)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 88888888888888888888888888888888888875
No 47
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.70 E-value=4.1e-17 Score=132.98 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=96.7
Q ss_pred chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCcc-----------------CcHHHHHHHHhcCCC
Q 025512 107 DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK-----------------DQIEERMAKIKEDPS 169 (251)
Q Consensus 107 ~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~-----------------~~~~~~~~~~~~~~~ 169 (251)
+..|.+.++.+... +.. ..+..+++.+++++.. +....+.++..+
T Consensus 90 d~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g--- 151 (260)
T 3jxi_A 90 YYRGQTALHIAIER-----------RCK----HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN--- 151 (260)
T ss_dssp SEESBCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT---
T ss_pred ccCCCCHHHHHHHc-----------CCH----HHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC---
Confidence 34677777766654 222 4566667777776654 345555555544
Q ss_pred cHHHHHHHHh---cCCCccccccCCCCchHHHHHHHcCC---------HHHHHHHHHCCCCC-------CCCCCCCCcHH
Q 025512 170 LKPILDEIES---GGPSAMMKYWNDKDNTALHYAAGYGR---------KECVALLLENGAAV-------TLQNMDGKTPI 230 (251)
Q Consensus 170 ~~~~l~~L~~---~~~~~~v~~~d~~G~TpLh~Aa~~g~---------~~~v~~Ll~~Gad~-------~~~d~~G~TpL 230 (251)
..+++++|+. .+ .+++.+|..|+||||+|+..|+ .+++++|+++|+++ +.+|..|+|||
T Consensus 152 ~~~~v~~Ll~~~~~g--a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 152 QPHIVHYLTENGHKQ--ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp CHHHHHHHHHCSSCC--CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred CHHHHHHHHhccccC--CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 4677777888 54 7789999999999999999888 79999999999999 78999999999
Q ss_pred HHHHHcCCHHHHHHHHhCC
Q 025512 231 DVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 231 ~~A~~~g~~~iv~~Ll~~~ 249 (251)
|+|+..|+.++|++|+++.
T Consensus 230 ~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 230 MMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999863
No 48
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.70 E-value=2.2e-17 Score=134.36 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=102.1
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhcc------CC-hHHHHHHHhcC-CCCc---cCcHHHHHHHHhcCCCcHHHHHH
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALM------QD-PSMSHMMESLT-NPTK---KDQIEERMAKIKEDPSLKPILDE 176 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll------~~-~~~~~ll~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 176 (251)
..|+.++++.|++.++.+...+..+...+ .. ..+..+++.+. +.+. .+....+.++..++..+++ +
T Consensus 66 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~---~ 142 (253)
T 1yyh_A 66 RYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLE---D 142 (253)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHH---H
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHH---H
Confidence 45677788888887765544333332211 11 35555666654 4433 4556667777766655444 4
Q ss_pred HHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 177 IESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 177 L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 143 Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 143 LINSH--ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp HHHTT--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 55555 678889999999999999999999999999999999999999999999999999999999999863
No 49
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=9.1e-17 Score=114.24 Aligned_cols=86 Identities=30% Similarity=0.301 Sum_probs=73.1
Q ss_pred cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 025512 156 QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL 235 (251)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 235 (251)
....+.++..+ ..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 25 ~t~L~~A~~~g---~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 25 GKKLLEAARAG---QDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp HHHHHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred chHHHHHHHcC---CHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 33344444443 456677777776 6788899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHH
Q 025512 236 NSQHDVLKLLE 246 (251)
Q Consensus 236 ~g~~~iv~~Ll 246 (251)
.|+.+++++|.
T Consensus 100 ~~~~~~~~~L~ 110 (110)
T 2zgd_A 100 NGNEDLAEILQ 110 (110)
T ss_dssp HTCHHHHHHHC
T ss_pred cCCHHHHHHhC
Confidence 99999999883
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.69 E-value=2.1e-16 Score=123.62 Aligned_cols=143 Identities=22% Similarity=0.165 Sum_probs=107.0
Q ss_pred CchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCc--
Q 025512 80 DPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ-- 156 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~-- 156 (251)
...+..+.+++..+... ++ .+..|++.++.+... +.. ..+..+++.+.+++..+.
T Consensus 15 ~g~~~~v~~ll~~~~~~-------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~~g~~~~~~~~~g 72 (201)
T 3hra_A 15 QRDTKKVKEILQDTTYQ-------VDEVDTEGNTPLNIAVHN-----------NDI----EIAKALIDRGADINLQNSIS 72 (201)
T ss_dssp TTCHHHHHHHHTCTTCC-------TTCCCTTSCCHHHHHHHH-----------TCH----HHHHHHHHTTCCTTCCCTTS
T ss_pred hccHHHHHHHHHcCCCC-------CCCCCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcCCCCCCCCCCC
Confidence 33466666666554411 33 566777777777655 222 566667777777766544
Q ss_pred -HHHHHHHHhcCCCcHHHHHHHH-hcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHH
Q 025512 157 -IEERMAKIKEDPSLKPILDEIE-SGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 157 -~~~~~~~~~~~~~~~~~l~~L~-~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A 233 (251)
...+.++.. +..+++++|+ .++ .+++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|
T Consensus 73 ~t~l~~A~~~---~~~~~~~~Ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 73 DSPYLYAGAQ---GRTEILAYMLKHAT--PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp CCHHHHHHHT---TCHHHHHHHHHHSC--CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHc---CCHHHHHHHHhccC--cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 444444443 4466777777 544 567888999999999999999999999999999 99999999999999999
Q ss_pred HHcCC-----HHHHHHHHhCC
Q 025512 234 KLNSQ-----HDVLKLLEKDA 249 (251)
Q Consensus 234 ~~~g~-----~~iv~~Ll~~~ 249 (251)
+..+. .+++++|+++.
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~g 168 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENG 168 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTT
T ss_pred HHhccchhhHHHHHHHHHHCC
Confidence 99998 99999999863
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.69 E-value=1.8e-16 Score=131.55 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=109.4
Q ss_pred hhHHHHHHHHhcCchHHHHHHHHHhhhcCCC-CCCCCCc---cchhchHHHHHHHHcCCcchHHHHHhhhhcc-------
Q 025512 68 PSIKELAEQIAKDPAFNSMAEQLQKTLHGAN-AEESIPQ---FDTTQYYSTMQQVMQNPQFMTMAERLGNALM------- 136 (251)
Q Consensus 68 p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~-~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll------- 136 (251)
...+..|...+ .+..+..++..+++... +..+... ....|+.++++.|++.++.++..+..+...+
T Consensus 41 ~t~l~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 41 GAVFLAACSSG---DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHT---CHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 34455555554 46667777777776211 1111111 1234566667777776665443322222111
Q ss_pred CChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHH---------------------------hcCCCcccccc
Q 025512 137 QDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIE---------------------------SGGPSAMMKYW 189 (251)
Q Consensus 137 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~---------------------------~~~~~~~v~~~ 189 (251)
+...+..+++.+.+++..+..+.+...++.......++..++ .+. ......
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~ 195 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH--INDVRH 195 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC--CCCCCC
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC--cchhhh
Confidence 114566667777776655443333333332222233332222 221 122234
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 190 NDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 190 d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 678999999999999999999999999999999999999999999999999999999863
No 52
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.69 E-value=1.4e-16 Score=127.52 Aligned_cols=154 Identities=14% Similarity=0.095 Sum_probs=106.2
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCccchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcC
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLT 149 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~ 149 (251)
.+.+|...+ .+..+..++..+.+... ......+..|++.++.+.... .. ..+..+++.+.
T Consensus 40 ~L~~A~~~g---~~~~v~~Ll~~~~~~~~--~~~~~~~~~g~t~L~~A~~~~-----------~~----~~v~~Ll~~g~ 99 (232)
T 2rfa_A 40 ALHIAALYD---NLEAAMVLMEAAPELVF--EPMTSELYEGQTALHIAVINQ-----------NV----NLVRALLARGA 99 (232)
T ss_dssp HHHHHHHTT---CHHHHHHHHHHCGGGGG--CCCCSTTTTTCCHHHHHHHTT-----------CH----HHHHHHHHTTC
T ss_pred HHHHHHHcC---CHHHHHHHHHcCchhcc--ccccccCCCCcCHHHHHHHcC-----------CH----HHHHHHHhCCC
Confidence 344554443 34555556666655100 000113445666666555441 11 34444555555
Q ss_pred CCCc----------------cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHH----
Q 025512 150 NPTK----------------KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECV---- 209 (251)
Q Consensus 150 ~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v---- 209 (251)
+++. .+....+.++..++ .+++++|+..| .+++.+|..|+||||+|+..|+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~ 174 (232)
T 2rfa_A 100 SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGS---EEIVRLLIEHG--ADIRAQDSLGNTVLHILILQPNKTFACQMY 174 (232)
T ss_dssp CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTC---HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred CCCcccCCcceeecccccccCCCCHHHHHHHcCC---HHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Confidence 5444 35566666666554 56677777776 67899999999999999999999988
Q ss_pred HHHHHCCCCC------CCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 210 ALLLENGAAV------TLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 210 ~~Ll~~Gad~------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++
T Consensus 175 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 175 NLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999998 58999999999999999999999999985
No 53
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.69 E-value=4.7e-17 Score=119.98 Aligned_cols=93 Identities=26% Similarity=0.318 Sum_probs=79.5
Q ss_pred CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q 025512 152 TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPID 231 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 231 (251)
+..+....+.++..++ .+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 7 ~~~g~t~L~~A~~~~~---~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 7 NHRGETLLHIASIKGD---IPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CTTCCCHHHHHHHHTC---HHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHH
Confidence 3445566666666654 56666777765 678889999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCC
Q 025512 232 VAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 232 ~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+..|+.+++++|+++.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g 99 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYG 99 (137)
T ss_dssp HHHHTTCHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcC
Confidence 999999999999999863
No 54
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.69 E-value=6.6e-17 Score=129.29 Aligned_cols=150 Identities=19% Similarity=0.151 Sum_probs=113.7
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHh
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMES 147 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~ 147 (251)
..+..|...+ .+..+..+++.+.+ ++ .+..|++.++.+...+ .. ..+..+++.
T Consensus 42 t~L~~A~~~g---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~~-----------~~----~~v~~Ll~~ 95 (231)
T 3aji_A 42 TALHWACSAG---HTEIVEFLLQLGVP--------VNDKDDAGWSPLHIAASAG-----------XD----EIVKALLVK 95 (231)
T ss_dssp CHHHHHHHHT---CHHHHHHHHHTTCC--------SCCCCTTSCCHHHHHHHHT-----------CH----HHHHHHHHT
T ss_pred CHHHHHHHcC---cHHHHHHHHHhCCC--------CCCcCCCCCCHHHHHHHcC-----------HH----HHHHHHHHc
Confidence 3455665555 35555566677766 44 6677888888776652 22 455566666
Q ss_pred cCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 025512 148 LTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM 224 (251)
Q Consensus 148 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~ 224 (251)
+.+++..+. ...+.++.. +..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 96 g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 96 GAHVNAVNQNGCTPLHYAASK---NRHEIAVMLLEGG--ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred CCCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC
Confidence 666655443 444554444 4466777777776 56788899999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.|+||||+|+..|+.+++++|+++.
T Consensus 171 ~g~t~L~~A~~~~~~~~v~~Ll~~g 195 (231)
T 3aji_A 171 EGNTPLHLACDEERVEEAKFLVTQG 195 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 9999999999999999999999863
No 55
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.69 E-value=6.4e-17 Score=126.05 Aligned_cols=128 Identities=9% Similarity=0.016 Sum_probs=100.2
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCc---HHHHHHHHhcC
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD---QIEERMAKIKEDPSL---KPILDEIESGG 181 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~l~~L~~~~ 181 (251)
..|.+.++.++..+.. .... ..+..+++.+++++..+ ..+.+.++....... .+++++|+..|
T Consensus 36 ~~g~T~Lh~A~~~~~~-------~~~~----~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G 104 (186)
T 3t8k_A 36 VLKSNILYDVLRNNND-------EARY----KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG 104 (186)
T ss_dssp HHTTTHHHHHTTCSCH-------HHHH----HHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHcCCc-------chHH----HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC
Confidence 5678888877665211 0011 35666788888887754 445666666665554 57888888887
Q ss_pred CCccccccCCCCc-hHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 182 PSAMMKYWNDKDN-TALHYAAGYG-----RKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 182 ~~~~v~~~d~~G~-TpLh~Aa~~g-----~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+++|.+|..|+ ||||+|+..+ +.+++++|++ +|+|++.+|..|+||||+|+..|+.++|++|+++
T Consensus 105 --adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 105 --ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp --CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred --CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 78999999999 9999999954 4579999999 9999999999999999999999999999999864
No 56
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.69 E-value=3.8e-16 Score=128.23 Aligned_cols=157 Identities=17% Similarity=0.088 Sum_probs=106.4
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhc
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESL 148 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~ 148 (251)
.+..|...+ .+..+..++..+.+. ...+ .+..|++.++.+... +.. ..+..+++.+
T Consensus 12 ~L~~A~~~g---~~~~v~~Ll~~g~~~-----~~~~~~~~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~g 68 (282)
T 1oy3_D 12 ALHLAVIHQ---HEPFLDFLLGFSAGH-----EYLDLQNDLGQTALHLAAIL-----------GEA----STVEKLYAAG 68 (282)
T ss_dssp HHHHHHHTT---CHHHHHHHHHHHTTS-----GGGGCCCTTSCCHHHHHHHH-----------TCH----HHHHHHHHTT
T ss_pred HHHHHHHcC---CHHHHHHHHhcCCCc-----ccccccCCCCCCHHHHHHHc-----------CCH----HHHHHHHHcC
Confidence 345554444 344555566666541 0011 345566666665544 222 4555566666
Q ss_pred CCCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCC---------------------------------------------
Q 025512 149 TNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPS--------------------------------------------- 183 (251)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~--------------------------------------------- 183 (251)
++++..+..+.+...++......+++++|+..+..
T Consensus 69 a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T 1oy3_D 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (282)
T ss_dssp CCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred CCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhh
Confidence 66665544444444444444555666666654421
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMD-GKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~-G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+++..|..|+||||+|+..|+.++|++|+++|++++.++.. |+||||+|+..|+.++|++|+++.
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 215 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred hcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 346778899999999999999999999999999999999854 999999999999999999999863
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=1.4e-16 Score=139.36 Aligned_cols=73 Identities=29% Similarity=0.332 Sum_probs=42.1
Q ss_pred HHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 172 PILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 172 ~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|++.|+.+++++|.
T Consensus 325 ~~v~~Ll~~g--ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~ 397 (437)
T 1n11_A 325 KLVKFLLQHQ--ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK 397 (437)
T ss_dssp HHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcC--CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 3444444443 445555555666666666666666666666666666666666666666666666666655554
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.68 E-value=1.5e-16 Score=121.62 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=77.8
Q ss_pred cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 025512 154 KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 233 (251)
.+....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 35 ~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 109 (172)
T 3v30_A 35 RGFTPLIWASAFG---EIETVRFLLEWG--ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYA 109 (172)
T ss_dssp TSCCHHHHHHHTT---CHHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcC---CHHHHHHHHHcC--CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3445555555554 356777777776 66888899999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCC
Q 025512 234 KLNSQHDVLKLLEKDA 249 (251)
Q Consensus 234 ~~~g~~~iv~~Ll~~~ 249 (251)
+..|+.+++++|+++.
T Consensus 110 ~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 110 VRGNHVKCVEALLARG 125 (172)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcC
Confidence 9999999999999863
No 59
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.68 E-value=5e-16 Score=123.76 Aligned_cols=160 Identities=17% Similarity=0.086 Sum_probs=106.4
Q ss_pred hHHHHHHHHHhhhcCCC--CCCCCCc---cchhchHHHHHHHHcCC--cchHH-HHHhhhhc-------cCChHHHHHHH
Q 025512 82 AFNSMAEQLQKTLHGAN--AEESIPQ---FDTTQYYSTMQQVMQNP--QFMTM-AERLGNAL-------MQDPSMSHMME 146 (251)
Q Consensus 82 ~f~~i~~~l~~~~~~~~--~~~~~~~---~~~~g~~~l~~~l~~~~--~~~~~-a~~~~~~l-------l~~~~~~~ll~ 146 (251)
.+..+..++..+..... +..+... ....++.++++.|++.+ ..+.. .+..+... .+...+..+++
T Consensus 14 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 93 (228)
T 2dzn_A 14 EFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93 (228)
T ss_dssp CHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHS
T ss_pred CHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 35556666666654221 1111111 22456677777777766 22221 11111111 01145666676
Q ss_pred hc--CCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCC
Q 025512 147 SL--TNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG-AAVT 220 (251)
Q Consensus 147 ~~--~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G-ad~~ 220 (251)
.+ .+++..+ ....+.++. .+..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++| ++++
T Consensus 94 ~g~~~~~~~~~~~g~t~L~~A~~---~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 168 (228)
T 2dzn_A 94 RPLKPDLNKITNQGVTCLHLAVG---KKWFEVSQFLIENG--ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN 168 (228)
T ss_dssp SSSCCCTTCCCTTCCCHHHHHHH---TTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC
T ss_pred CCCCcccccCCcCCCCHHHHHHH---cCCHhHHHHHHHcC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc
Confidence 66 5555443 344444443 34567777777776 678888999999999999999999999999999 9999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 221 LQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 221 ~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
.+|..|+||||+|+..|+.+++++|+
T Consensus 169 ~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 169 WQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999998
No 60
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.68 E-value=3.1e-16 Score=124.99 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=98.4
Q ss_pred hhchHHHHHHHHcCC--cchHHHHHhhhhc-------cCChHHHHHHHhcCCCCccCcHHHHHHHHhcCCCcHHHHHHHH
Q 025512 108 TTQYYSTMQQVMQNP--QFMTMAERLGNAL-------MQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIE 178 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~--~~~~~a~~~~~~l-------l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 178 (251)
..++.++++.|++.+ ..+...+..+... .....+..+++.+.+++..+..+.+...++...+..+++++|+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456677777787765 4333222222111 1114677778888888776554443333333344567788888
Q ss_pred hcCCCccccccCCCCchHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 179 SGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLL-ENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 179 ~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll-~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
..+ ..+++..|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+.. +++++|+++
T Consensus 161 ~~g-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 161 GLG-KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp TTT-CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred hcC-cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 776 2567888999999999999999999999999 88999999999999999999764 678888765
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.68 E-value=1.5e-16 Score=131.43 Aligned_cols=107 Identities=21% Similarity=0.226 Sum_probs=86.0
Q ss_pred hHHHHHHHhcC-CCCccCcHH---HHHHHHhc--CCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHH
Q 025512 139 PSMSHMMESLT-NPTKKDQIE---ERMAKIKE--DPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALL 212 (251)
Q Consensus 139 ~~~~~ll~~~~-~~~~~~~~~---~~~~~~~~--~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~L 212 (251)
..+..+++.+. +++..+..+ .+.+++.. .....+++.+|+..+ .+.+..|..|+||||+|+..|+.++|++|
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 202 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG--NINAKASQAGQTALMLAVSHGRVDVVKAL 202 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS--CTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC--CCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 56777788776 665554443 33333222 334566777777776 45667788999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 213 LENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 213 l~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
+++|++++.+|..|+||||+|+..|+.++|++|++
T Consensus 203 l~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 203 LACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 99999999999999999999999999999999998
No 62
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.68 E-value=2.2e-16 Score=135.03 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=76.7
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAA-----VTLQNMDGKTP 229 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad-----~~~~d~~G~Tp 229 (251)
+....+.++..+ ....+++++|+..+ .+++..|..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||
T Consensus 138 g~t~L~~A~~~g-~~~~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~ 214 (364)
T 3ljn_A 138 GQTALHWCVGLG-PEYLEMIKILVQLG--ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214 (364)
T ss_dssp CCCHHHHHHHSC-GGGHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT
T ss_pred CCCHHHHHHHcC-CchHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcH
Confidence 344555544433 11567777777776 67888999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCC
Q 025512 230 IDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 230 L~~A~~~g~~~iv~~Ll~~~ 249 (251)
||+|+..|+.++|++|+++.
T Consensus 215 L~~A~~~g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMG 234 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTT
T ss_pred HHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999863
No 63
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.68 E-value=9.5e-17 Score=127.66 Aligned_cols=149 Identities=17% Similarity=0.215 Sum_probs=110.1
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHh
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMES 147 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~ 147 (251)
..+..|...+ .+..+..++..+++ ++ .+..|++.++.++.... . ..+..+++.
T Consensus 27 t~L~~A~~~g---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~~~-----------~----~~v~~Ll~~ 80 (223)
T 2f8y_A 27 TALHLAARYS---RSDAAKRLLEASAD--------ANIQDNMGRTPLHAAVSADA-----------Q----GVFQILIRN 80 (223)
T ss_dssp CHHHHHHHTT---CHHHHHHHHHTTCC--------TTCCCTTSCCHHHHHHHTTC-----------H----HHHHHHHHB
T ss_pred chHHHHHHcC---CHHHHHHHHHcCCC--------CCCcCCCCCCHHHHHHHcCC-----------H----HHHHHHHHc
Confidence 3455565544 35556667777766 45 56777777777765521 1 344444444
Q ss_pred cC-CCC---ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 025512 148 LT-NPT---KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN 223 (251)
Q Consensus 148 ~~-~~~---~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d 223 (251)
+. +++ ..+....+.++... ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~---~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 155 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLA---VEGMLEDLINSH--ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 155 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhC---cHHHHHHHHHcC--CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 43 333 33445556665554 456777777766 6688889999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 224 MDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 224 ~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
..|+||||+|+..|+.+++++|+++
T Consensus 156 ~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 156 NREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999999986
No 64
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.68 E-value=8.9e-16 Score=123.12 Aligned_cols=174 Identities=13% Similarity=0.146 Sum_probs=116.6
Q ss_pred hhHHHHHHHHhcCchHHHHHHHHHhhhcCCC-CCCCCCc---cchhchHHHHHHHHcCCcchHHHHHhhhhc------c-
Q 025512 68 PSIKELAEQIAKDPAFNSMAEQLQKTLHGAN-AEESIPQ---FDTTQYYSTMQQVMQNPQFMTMAERLGNAL------M- 136 (251)
Q Consensus 68 p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~-~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~~~~~l------l- 136 (251)
.+.+..|...+ .+..+..++..+++... ...+... ....++.++++.|++.+..+...+..+... .
T Consensus 12 ~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 12 RSPLHAAAEAG---HVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CCHHHHHHHHT---CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcC---cHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Confidence 34566676666 24455556666665211 1111111 224566777777877765443222222111 1
Q ss_pred CChHHHHHHHhc-CCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHH
Q 025512 137 QDPSMSHMMESL-TNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALL 212 (251)
Q Consensus 137 ~~~~~~~ll~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~L 212 (251)
+...+..+++.+ .+++..+ ....+.++.. +..+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY---KHVDLVKLLLSKG--SDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc---CCHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 114556666666 4554443 3444444444 4467777778776 56788899999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 213 LENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 213 l~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC
Confidence 9999999999999999999999999999999999864
No 65
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.68 E-value=4e-16 Score=125.16 Aligned_cols=134 Identities=22% Similarity=0.249 Sum_probs=98.4
Q ss_pred hhchHHHHHHHHcCC-cchHHHHHhhhhc-------cCChHHHHHHHhcCCCCccCc---HHHHHHHHhcCCCcHHHHHH
Q 025512 108 TTQYYSTMQQVMQNP-QFMTMAERLGNAL-------MQDPSMSHMMESLTNPTKKDQ---IEERMAKIKEDPSLKPILDE 176 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~-~~~~~a~~~~~~l-------l~~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~ 176 (251)
..++.++++.|++.+ ..+...+..+... .+...+..+++.+.+++..+. ...+.++.. +..+++++
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~ 162 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS---GCVDIAEI 162 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH---CCHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC---CCHHHHHH
Confidence 456777788887765 3322221111110 111567777888888776543 445555544 45677888
Q ss_pred HHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 025512 177 IESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 246 (251)
Q Consensus 177 L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 246 (251)
|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..|+
T Consensus 163 Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 163 LLAAK--CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHTTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHcC--CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 88876 678889999999999999999999999999999999999999999999999999986554443
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.68 E-value=3e-16 Score=127.58 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=107.4
Q ss_pred HHHHHHHHhcCchHHHHHH-HHHhhhcCCCCCCCCCc-----cchhchHHHHHHHHc---CCcchHHHHHhhhhccCChH
Q 025512 70 IKELAEQIAKDPAFNSMAE-QLQKTLHGANAEESIPQ-----FDTTQYYSTMQQVMQ---NPQFMTMAERLGNALMQDPS 140 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~-~l~~~~~~~~~~~~~~~-----~~~~g~~~l~~~l~~---~~~~~~~a~~~~~~ll~~~~ 140 (251)
.+..|...+.-..+..+.+ ++..+.+ ++ .+..|.+.++.++.. +.. ..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~l~~~g~~--------i~~~~~~~d~~g~t~L~~A~~~~~~g~~---------------~~ 61 (256)
T 2etb_A 5 RLFSVVSRGVPEELTGLLEYLRWNSKY--------LTDSAYTEGSTGKTCLMKAVLNLQDGVN---------------AC 61 (256)
T ss_dssp HHHHHHHHTCGGGGTTHHHHHHHHTCC--------TTSGGGSBTTTTBCHHHHHHHTCBTTBC---------------TT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCC--------cccccccCCCCCCCHHHHHHHccccchH---------------HH
Confidence 3455666664444555554 3345555 33 367888888888765 211 22
Q ss_pred HHHHHHhcCCC--------------CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCC-------------C
Q 025512 141 MSHMMESLTNP--------------TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDK-------------D 193 (251)
Q Consensus 141 ~~~ll~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~-------------G 193 (251)
+..+++.+.++ +..+....+.++..+ ..+++++|+..+ .+++..|.. |
T Consensus 62 v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 62 IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKR---SLQCVKLLVENG--ADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp HHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCCCSGGGSCCSSSCCCSC
T ss_pred HHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCcccccccccccccccccCC
Confidence 33333333222 234566667666655 456777777776 567777776 9
Q ss_pred chHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHhC
Q 025512 194 NTALHYAAGYGRKECVALLLE---NGAAVTLQNMDGKTPIDVAKL--NSQHD-------VLKLLEKD 248 (251)
Q Consensus 194 ~TpLh~Aa~~g~~~~v~~Ll~---~Gad~~~~d~~G~TpL~~A~~--~g~~~-------iv~~Ll~~ 248 (251)
+||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+. .++.+ ++++|+++
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ 203 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM 203 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc
Confidence 999999999999999999999 999999999999999999999 88888 99999874
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.68 E-value=4.6e-17 Score=130.87 Aligned_cols=149 Identities=20% Similarity=0.140 Sum_probs=105.0
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhc
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESL 148 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~ 148 (251)
.+.+|...+ .+..+..++..+++ ++ .+..|++.++.+...+. . ..+..+++.+
T Consensus 48 ~L~~A~~~~---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~~~-----------~----~~v~~Ll~~~ 101 (236)
T 1ikn_D 48 PLHLAVITN---QPEIAEALLGAGCD--------PELRDFRGNTPLHLACEQGC-----------L----ASVGVLTQSC 101 (236)
T ss_dssp HHHHHHHTT---CHHHHHCCCSCCCC--------SCCCCTTCCCHHHHHHHHTC-----------H----HHHHHHHHST
T ss_pred HHHHHHHcC---CHHHHHHHHHcCCC--------CCCcCCCCCCHHHHHHHcCC-----------H----HHHHHHHhcc
Confidence 345554444 23444445555554 44 55667777766655421 1 2334444443
Q ss_pred CC---------CCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCC-CCchHHHHHHHcCCHHHHHHHHHCCCC
Q 025512 149 TN---------PTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWND-KDNTALHYAAGYGRKECVALLLENGAA 218 (251)
Q Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~Gad 218 (251)
.+ .+..+....+.++..+ ..+++++|+..+ .+++.++. .|+||||+|+..|+.++|++|+++|++
T Consensus 102 ~~~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 176 (236)
T 1ikn_D 102 TTPHLHSILKATNYNGHTCLHLASIHG---YLGIVELLVSLG--ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 176 (236)
T ss_dssp TTTSSSCGGGCCCTTCCCHHHHHHHTT---CHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred cchhHHHHhhccCCCCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 32 2334555666666554 456777777776 67788887 999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 219 VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 219 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 177 ~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 207 (236)
T 1ikn_D 177 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207 (236)
T ss_dssp SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred CCcccCCCCCHHHHHHccCchHHHHHHHHcc
Confidence 9999999999999999999999999999864
No 68
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=127.42 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=71.7
Q ss_pred hHHHHHHHhcCCCCcc--CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC
Q 025512 139 PSMSHMMESLTNPTKK--DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG 216 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G 216 (251)
..+..+++.+.+++.. +....+.++.. +..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|
T Consensus 83 ~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 83 DCVNLLLQHGASVQPESDLASPIHEAARR---GHVECVNSLIAYG--GNIDHKISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp HHHHHHHHTTCCSSCSCTTCCHHHHHHHT---TCHHHHHHHHHTT--CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHc---CcHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 3455556666655433 23334444433 3355666666665 566777788888888888888888888888888
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 217 AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
++++. +..|+||||+|+..|+.+++++|+++
T Consensus 158 ~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 158 ADVNQ-GKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 88875 77788888888888888888888765
No 69
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.67 E-value=3.8e-16 Score=112.95 Aligned_cols=99 Identities=22% Similarity=0.214 Sum_probs=76.2
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN 215 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ 215 (251)
..+..+++.+.+++..+ ....+.++.. ...+++++|+..+ .+++.+|..|+||||+|+..|+.+++++|+++
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g--~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAADC---GQLEILEFLLLKG--ADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCHHHHHHHT---TCHHHHHHHHTTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcCccCCCCCcHHHHHHHc---CCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 44555566666555544 3444444444 4467777888876 67889999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 216 GAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 216 Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
|++++.+|..|+||||+|. ..++.++|
T Consensus 96 ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 96 GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 9999999999999999994 44555544
No 70
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.67 E-value=2.2e-16 Score=130.96 Aligned_cols=74 Identities=12% Similarity=0.042 Sum_probs=34.5
Q ss_pred HHHHHHHHhcCCCccccccCCCC-chHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 171 KPILDEIESGGPSAMMKYWNDKD-NTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G-~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
.+++++|+..+ .+++..|..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|++
T Consensus 108 ~~~v~~Ll~~g--a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~ 182 (285)
T 3kea_A 108 MQTVKLFVKKN--WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLD 182 (285)
T ss_dssp HHHHHHHHHHC--GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcC--CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHH
Confidence 33444444433 3344444444 35555555555555555555555443111 144555555555555555555543
No 71
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.67 E-value=3.4e-16 Score=134.62 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=88.0
Q ss_pred hHHHHHHHhcCCCCc-----------cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHH
Q 025512 139 PSMSHMMESLTNPTK-----------KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKE 207 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~ 207 (251)
..+..+++.+.+++. .+....+.++. .+..+++++|+..+ ..+++.+|..|+||||+|+..|+.+
T Consensus 252 ~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~---~g~~~~v~~Ll~~~-~~~~n~~d~~g~TpL~~A~~~g~~~ 327 (373)
T 2fo1_E 252 ASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ---VSNMPIVKYLVGEK-GSNKDKQDEDGKTPIMLAAQEGRIE 327 (373)
T ss_dssp HHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHS---SCCHHHHHHHHHHS-CCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHCCCCcccccccccCcccccCCCHHHHHHH---hCCHHHHHHHHHhc-CCCccCcCCCCCCHHHHHHHcCCHH
Confidence 456777888888765 33444555443 34466777777543 2578889999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 208 CVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 208 ~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|++|+++|++++.+|..|+||||+|+..|+.+||++|+++.
T Consensus 328 iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 328 VVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999864
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=126.69 Aligned_cols=104 Identities=17% Similarity=0.098 Sum_probs=78.5
Q ss_pred HHHhcCCCCc---cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCC
Q 025512 144 MMESLTNPTK---KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVT 220 (251)
Q Consensus 144 ll~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~ 220 (251)
+++.+.+++. .+..+.+....+...+..+++++|+..+ .+++..|..|+||||+|+..|+.++|++|+++|++++
T Consensus 4 ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 4444544432 2233333333333334566777777766 5788899999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 221 LQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 221 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+|..|+||||+|+..|+.+++++|+++.
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 110 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHG 110 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999863
No 73
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.67 E-value=1.3e-16 Score=123.57 Aligned_cols=123 Identities=21% Similarity=0.259 Sum_probs=89.3
Q ss_pred chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCcc---CcHHHHHHHHhcCCCcHHHHHHHHhcCCC
Q 025512 107 DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK---DQIEERMAKIKEDPSLKPILDEIESGGPS 183 (251)
Q Consensus 107 ~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~~~~ 183 (251)
+..|.+.++.+... +.. ..+..+++ +.+++.. +....+.++..++ .+++++|+..+
T Consensus 41 ~~~g~t~L~~A~~~-----------g~~----~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~---~~~v~~Ll~~g-- 99 (183)
T 3deo_A 41 VSEYETPWWTAARK-----------ADE----QALSQLLE-DRDVDAVDENGRTALLFVAGLGS---DKCVRLLAEAG-- 99 (183)
T ss_dssp HHHHHHHHHHHHHT-----------TCH----HHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTC---HHHHHHHHHTT--
T ss_pred CCCCCCHHHHHHHc-----------CCH----HHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCC---HHHHHHHHHcC--
Confidence 44566666666554 222 33444444 4444443 4455566655544 56777777776
Q ss_pred ccccccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc----------------CCHHHHHHHH
Q 025512 184 AMMKYWN-DKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN----------------SQHDVLKLLE 246 (251)
Q Consensus 184 ~~v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~----------------g~~~iv~~Ll 246 (251)
.+++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|.
T Consensus 100 a~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 100 ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp CCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHH
Confidence 6677787 8899999999999999999999999999999999999999998765 6788888888
Q ss_pred hCCC
Q 025512 247 KDAF 250 (251)
Q Consensus 247 ~~~~ 250 (251)
++-|
T Consensus 180 ~~~~ 183 (183)
T 3deo_A 180 GQVF 183 (183)
T ss_dssp TCCC
T ss_pred HhhC
Confidence 7643
No 74
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.67 E-value=7.6e-16 Score=125.85 Aligned_cols=146 Identities=15% Similarity=0.117 Sum_probs=108.5
Q ss_pred HHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcC
Q 025512 71 KELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLT 149 (251)
Q Consensus 71 ~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~ 149 (251)
+..|...+ .+..+..++..+++ ++ .+..|.+.++.+... +.. ..+..+++.+.
T Consensus 7 L~~A~~~g---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~g~ 60 (261)
T 2xai_A 7 MHEAAIHG---HQLSLRNLISQGWA--------VNIITADHVSPLHEACLG-----------GHL----SCVKILLKHGA 60 (261)
T ss_dssp HHHHHHHT---CHHHHHHHHHTTCC--------SSCCCTTCCCHHHHHHHH-----------TCH----HHHHHHHHTTC
T ss_pred HHHHHHcC---CHHHHHHHHHCCCC--------CCCcCCCCCCHHHHHHHc-----------CCH----HHHHHHHHCCC
Confidence 44455544 34555566666666 55 667788887777655 222 45666677777
Q ss_pred CCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 025512 150 NPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDG 226 (251)
Q Consensus 150 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G 226 (251)
+++..+ ....+.++..+ ..+++++|+..+ .+++. +.+|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 61 ~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 134 (261)
T 2xai_A 61 QVNGVTADWHTPLFNACVSG---SWDCVNLLLQHG--ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL 134 (261)
T ss_dssp CTTCCCTTSCCHHHHHHHHT---CHHHHHHHHHTT--CCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred CCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHCC--CCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCC
Confidence 766544 44455555554 466777777776 34443 4569999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhC
Q 025512 227 KTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 227 ~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
+||||+|+..|+.+++++|+++
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 135 GTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999999999875
No 75
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.67 E-value=1.1e-15 Score=129.32 Aligned_cols=60 Identities=23% Similarity=0.241 Sum_probs=32.8
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 184 AMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 184 ~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.+++.+|.+|+||||+|+..|+.++|++||++|||++.+ +|||+|++.|+.+||++|+++
T Consensus 264 ~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 264 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHT
T ss_pred CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHC
Confidence 345555555555555555555555555555555555432 355555555555555555553
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.66 E-value=4.3e-16 Score=114.76 Aligned_cols=86 Identities=24% Similarity=0.242 Sum_probs=74.4
Q ss_pred HHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 159 ERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 159 ~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
.+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 18 l~~A~~~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 18 LLEAARAG---QDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHT---CHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHhC---CHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34444443 456667777776 6688899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 025512 239 HDVLKLLEKDA 249 (251)
Q Consensus 239 ~~iv~~Ll~~~ 249 (251)
.+++++|+++.
T Consensus 93 ~~~v~~Ll~~g 103 (136)
T 2jab_A 93 LEIAEVLLKHG 103 (136)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999863
No 77
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.66 E-value=7.3e-17 Score=118.92 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=77.0
Q ss_pred cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHH
Q 025512 154 KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMD-GKTPIDV 232 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~-G~TpL~~ 232 (251)
.+....+.++..+ ..+++++|+..+ .+++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+
T Consensus 11 ~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 11 SSDAGLATAAARG---QVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHD 84 (136)
T ss_dssp CCSCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHH
T ss_pred CCccHHHHHHHcC---CHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHH
Confidence 3444555555544 367777777776 6788899999999999999 9999999999999999999999 9999999
Q ss_pred HHHcCCHHHHHHHHhCC
Q 025512 233 AKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 233 A~~~g~~~iv~~Ll~~~ 249 (251)
|+..|+.+++++|+++.
T Consensus 85 A~~~~~~~~v~~Ll~~g 101 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAG 101 (136)
T ss_dssp HHHHTCHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHcC
Confidence 99999999999999863
No 78
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.65 E-value=3.2e-16 Score=129.04 Aligned_cols=105 Identities=20% Similarity=0.249 Sum_probs=82.5
Q ss_pred HHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCC
Q 025512 140 SMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENG 216 (251)
Q Consensus 140 ~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~G 216 (251)
.+..+++.+++++..+ ..+.+.++..++.++ +++|+..+ .+++..+..|+||||+|+..++.+++++|+++|
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~---v~~Ll~~~--a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 142 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADL---IPLLLKHG--ANAGARNADQAVPLHLACQQGHFQVVKCLLDSN 142 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTH---HHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH---HHHHHhcC--CCcCccCCCCCCccccccccChHHHHHHHHHCC
Confidence 4455677777776554 456667776666554 44556655 567888999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 217 AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++++.+|..|+||||+|+..|+.++|++|+++.
T Consensus 143 ~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 175 (269)
T 4b93_B 143 AKPNKKDLSGNTPLIYACSGGHHELVALLLQHG 175 (269)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 999999999999999999999999999999863
No 79
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.65 E-value=3.9e-16 Score=111.48 Aligned_cols=92 Identities=34% Similarity=0.443 Sum_probs=78.7
Q ss_pred ccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 025512 153 KKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDV 232 (251)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 232 (251)
..+....+.++..++ .+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 7 ~~g~t~L~~A~~~~~---~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGH---AEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHL 81 (115)
T ss_dssp CSSCCHHHHHHHHTC---HHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHH
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 344555666665544 56677777776 5688899999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC
Q 025512 233 AKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 233 A~~~g~~~iv~~Ll~~~ 249 (251)
|+..++.+++++|+++.
T Consensus 82 A~~~~~~~~~~~Ll~~g 98 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKG 98 (115)
T ss_dssp HHTTTCHHHHHHHHTTS
T ss_pred HHHCCCHHHHHHHHHcC
Confidence 99999999999999863
No 80
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=126.75 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=90.3
Q ss_pred hchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCcc--CcHHHHHHHHhcCCCcHHHHHHHHh
Q 025512 109 TQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKK--DQIEERMAKIKEDPSLKPILDEIES 179 (251)
Q Consensus 109 ~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~L~~ 179 (251)
.|+.++++.|++.++.+...+..+...+ +...+..+++.+.+++.. +....+.++..+ ..+++++|+.
T Consensus 102 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~ 178 (285)
T 3d9h_A 102 GGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRG---HVECVNSLIA 178 (285)
T ss_dssp TTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHT---CHHHHHHHHH
T ss_pred CCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHH
Confidence 3455556666665544332222221110 114556667766665433 344445555444 3556666676
Q ss_pred cCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 180 GGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 180 ~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.+ .+++..|..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++.
T Consensus 179 ~g--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 179 YG--GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp TT--CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 65 56778888899999999999999999999999999884 888899999999999999999888753
No 81
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.65 E-value=6.1e-17 Score=129.10 Aligned_cols=106 Identities=24% Similarity=0.222 Sum_probs=81.0
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhc-CCCccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKEDPSLKPILDEIESG-GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLE 214 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~-~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~ 214 (251)
..+..+++.+.+++..+ ....+.++.. +..+++++|+.. + .+++.+|..|+||||+|+..|+.++|++|++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~g--~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 161 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLDKAGSTALYWACHG---GHKDIVEMLFTQPN--IELNQQNKLGDTALHAAAWKGYADIVQLLLA 161 (222)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHTTSTT--CCCCCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhCCCCccccCCCCCCHHHHHHHc---CCHHHHHHHHcCCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45566666666666444 3444554444 446777777776 5 6788899999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 215 NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 215 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|++++.+|..|+||||+|+..++.++++.|+++.
T Consensus 162 ~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 162 KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp HTCCSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 99999999999999999999999999999888753
No 82
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.65 E-value=1.2e-15 Score=125.00 Aligned_cols=171 Identities=15% Similarity=0.094 Sum_probs=117.7
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhhhcCCC-CCCCCCc---cchhchHHHHHHHHcCCcchHH------------------
Q 025512 70 IKELAEQIAKDPAFNSMAEQLQKTLHGAN-AEESIPQ---FDTTQYYSTMQQVMQNPQFMTM------------------ 127 (251)
Q Consensus 70 ~~~la~~i~~n~~f~~i~~~l~~~~~~~~-~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~------------------ 127 (251)
.+..|...+ .+.-+..+++.+++... +..+... ....++.++++.|++.+..+..
T Consensus 75 ~L~~A~~~~---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 75 PFLLAAIAG---SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151 (285)
T ss_dssp HHHHHHHHT---CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCH
T ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcH
Confidence 445555444 34445555566554221 1111111 2356778888888887654332
Q ss_pred ---HHHhhhhccCChHHHHHHHh-cCCCCcc---CcHHHHHHHHhcCC-CcHHHHHHHHhcCCCccccccCCCCchHHHH
Q 025512 128 ---AERLGNALMQDPSMSHMMES-LTNPTKK---DQIEERMAKIKEDP-SLKPILDEIESGGPSAMMKYWNDKDNTALHY 199 (251)
Q Consensus 128 ---a~~~~~~ll~~~~~~~ll~~-~~~~~~~---~~~~~~~~~~~~~~-~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~ 199 (251)
+...+.. ..+..+++. +.+++.. +....+.++...+. ...+++++|+..+ .+++.+|..|+||||+
T Consensus 152 L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g--~~~~~~~~~g~t~L~~ 225 (285)
T 1wdy_A 152 LMDAAEKGHV----EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG--ADVNVRGERGKTPLIL 225 (285)
T ss_dssp HHHHHHHTCH----HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT--CCSSCCCTTSCCHHHH
T ss_pred HHHHHHcCCH----HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC--CCCCCcCCCCCcHHHH
Confidence 1111222 456666665 6666554 34445555554443 3477888888887 6788899999999999
Q ss_pred HHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 200 AAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 200 Aa~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 226 A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp HHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999 79999999999999999999999999999999853
No 83
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.65 E-value=1.5e-15 Score=125.79 Aligned_cols=149 Identities=15% Similarity=0.115 Sum_probs=111.9
Q ss_pred hHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHh
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMES 147 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~ 147 (251)
..+..|...+ .+..+..++..+.+ ++ .+..|++.++.+... +.. ..+..+++.
T Consensus 61 t~L~~Aa~~g---~~~~v~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~ 114 (285)
T 3d9h_A 61 SPMHEAAIHG---HQLSLRNLISQGWA--------VNIITADHVSPLHEACLG-----------GHL----SCVKILLKH 114 (285)
T ss_dssp CHHHHHHHTT---CHHHHHHHHHTTCC--------SCEECTTCCCHHHHHHHT-----------TCH----HHHHHHHHT
T ss_pred CHHHHHHHcC---CHHHHHHHHHCCCC--------CCCcCCCCCCHHHHHHHC-----------CcH----HHHHHHHHC
Confidence 4455555554 34556666777766 55 677888888887766 222 456667777
Q ss_pred cCCCCccC---cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 025512 148 LTNPTKKD---QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM 224 (251)
Q Consensus 148 ~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~ 224 (251)
+.+++..+ ....+.++..+ ..+++++|+..+ .+++. +..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 115 ga~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~ 188 (285)
T 3d9h_A 115 GAQVNGVTADWHTPLFNACVSG---SWDCVNLLLQHG--ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKIS 188 (285)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHT---CHHHHHHHHHTT--CCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBT
T ss_pred CCCCCCCCCCCCCHHHHHHHcC---HHHHHHHHHHCC--CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 77776554 44455555544 456777777776 34443 44599999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.|+||||+|+..|+.+++++|+++.
T Consensus 189 ~g~t~L~~A~~~~~~~~v~~Ll~~g 213 (285)
T 3d9h_A 189 HLGTPLYLACENQQRACVKKLLESG 213 (285)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCC
Confidence 9999999999999999999999863
No 84
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.65 E-value=1.1e-15 Score=129.22 Aligned_cols=127 Identities=18% Similarity=0.169 Sum_probs=95.8
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHH-hcCCCCccC---cHHHHHHHHhc-CCCcHHHHHHHHhc
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMME-SLTNPTKKD---QIEERMAKIKE-DPSLKPILDEIESG 180 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~-~~~~~~~~~---~~~~~~~~~~~-~~~~~~~l~~L~~~ 180 (251)
.+..|.+.++.+... +.. ..+..+++ .+++++..+ ....+...... ......++++|+..
T Consensus 164 ~~~~g~T~L~~A~~~-----------g~~----~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~ 228 (337)
T 4g8k_A 164 LRKGGATALMDAAEK-----------GHV----EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 228 (337)
T ss_dssp CTTCSCCHHHHHHHH-----------TCH----HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT
T ss_pred ccCCCCcHHHHHHHC-----------CCH----HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC
Confidence 455666777666544 222 33444443 355555443 33444444444 45566788888888
Q ss_pred CCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 181 GPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 181 ~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
| ++++.+|..|+||||+|+..|+.++|++|++. |++++.+|..|+||||+|++.|+.+||++|+++.
T Consensus 229 g--ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 229 G--ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 296 (337)
T ss_dssp T--CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS
T ss_pred C--CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 7 67899999999999999999999999999986 8999999999999999999999999999999863
No 85
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.65 E-value=2.7e-15 Score=120.45 Aligned_cols=155 Identities=19% Similarity=0.206 Sum_probs=110.1
Q ss_pred hHHHHHHHHhcCchHHHHHHHHH-hhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHH
Q 025512 69 SIKELAEQIAKDPAFNSMAEQLQ-KTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMME 146 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i~~~l~-~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~ 146 (251)
+.+..|...+.-..++.+.+.+. .+.+ ++ .+..|.+.++.+... +.. ..+..+++
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--------~~~~~~~g~t~L~~A~~~-----------~~~----~~v~~Ll~ 67 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRE--------LDIYNNLRQTPLHLAVIT-----------TLP----SVVRLLVT 67 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCC--------SCCCCTTSCCHHHHHHHT-----------TCH----HHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCC--------CCcccccCCCHHHHHHHc-----------CCH----HHHHHHHH
Confidence 34566666553333444444322 3333 34 566778887777665 222 45566677
Q ss_pred hcCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCC--CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 025512 147 SLTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGP--SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTL 221 (251)
Q Consensus 147 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~--~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~ 221 (251)
.+.+++..+. ...+.++.. ...+++++|+..+. ..+++..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 68 ~g~~~~~~~~~g~t~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 144 (241)
T 1k1a_A 68 AGASPMALDRHGQTAAHLACEH---RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA 144 (241)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCCccccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 7777665543 344444443 44566666776653 136788899999999999999999999999999999999
Q ss_pred CC-CCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 222 QN-MDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 222 ~d-~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++ ..|+||||+|+..|+.+++++|+++.
T Consensus 145 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 173 (241)
T 1k1a_A 145 VDIKSGRSPLIHAVENNSLSMVQLLLQHG 173 (241)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99 89999999999999999999999863
No 86
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.64 E-value=3e-16 Score=126.13 Aligned_cols=126 Identities=21% Similarity=0.193 Sum_probs=94.4
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCcc---CcHHHHHHHHhcCCCcHHHHHHHHhcCC
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK---DQIEERMAKIKEDPSLKPILDEIESGGP 182 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~~~ 182 (251)
.+..|++.++.+...+.. ..+..+++.+.+++.. +....+.++..+ ..+++++|+..+.
T Consensus 41 ~~~~g~t~L~~A~~~~~~---------------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~~~ 102 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQP---------------EIAEALLGAGCDPELRDFRGNTPLHLACEQG---CLASVGVLTQSCT 102 (236)
T ss_dssp CCTTCCCHHHHHHHTTCH---------------HHHHCCCSCCCCSCCCCTTCCCHHHHHHHHT---CHHHHHHHHHSTT
T ss_pred cCCCCCCHHHHHHHcCCH---------------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC---CHHHHHHHHhccc
Confidence 556677888777665221 2333334445555543 344555555554 4566667777653
Q ss_pred ----CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 183 ----SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNM-DGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 183 ----~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
...++..+..|+||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.++|++|+++.
T Consensus 103 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 103 TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp TTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred chhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 234677888999999999999999999999999999999997 9999999999999999999999863
No 87
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.64 E-value=9.8e-16 Score=133.97 Aligned_cols=142 Identities=18% Similarity=0.202 Sum_probs=107.5
Q ss_pred CchHHHHHHHHHhhhcCCCCCCCCCc-cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC---
Q 025512 80 DPAFNSMAEQLQKTLHGANAEESIPQ-FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD--- 155 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~~~~~~~-~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~--- 155 (251)
...+..+..+++.+.+ ++ .+..|.+.++.+.... .. ..+..+++.+.+++..+
T Consensus 222 ~~~~~~~~~Ll~~g~~--------~~~~~~~g~t~L~~A~~~g-----------~~----~~v~~Ll~~~~~~~~~~~~g 278 (437)
T 1n11_A 222 QNQVEVARSLLQYGGS--------ANAESVQGVTPLHLAAQEG-----------HA----EMVALLLSKQANGNLGNKSG 278 (437)
T ss_dssp TTCHHHHHHHHHTTCC--------TTCCCTTCCCHHHHHHHTT-----------CH----HHHHHHHTTTCCTTCCCTTC
T ss_pred cCCHHHHHHHHHcCCC--------CCCCCCCCCCHHHHHHHCC-----------CH----HHHHHHHhcCCCCCCCCCCC
Confidence 3456666677777766 44 5566777777665542 11 34455555565555443
Q ss_pred cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 025512 156 QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL 235 (251)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 235 (251)
....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 279 ~t~L~~A~~~~---~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 279 LTPLHLVAQEG---HVPVADVLIKHG--VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp CCHHHHHHHHT---CHHHHHHHHHHT--CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcC---CHHHHHHHHhCC--ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 44555555444 456777777776 6788899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCC
Q 025512 236 NSQHDVLKLLEKDA 249 (251)
Q Consensus 236 ~g~~~iv~~Ll~~~ 249 (251)
.|+.++|++|+++.
T Consensus 354 ~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 354 QGHTDIVTLLLKNG 367 (437)
T ss_dssp TTCHHHHHHHHHTT
T ss_pred CChHHHHHHHHHCc
Confidence 99999999999863
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.64 E-value=3e-16 Score=127.25 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=79.5
Q ss_pred HHHHHHhcCCCCcc---CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccC-CCCchHHHHHHHcCCHHHHHHHHHCC
Q 025512 141 MSHMMESLTNPTKK---DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWN-DKDNTALHYAAGYGRKECVALLLENG 216 (251)
Q Consensus 141 ~~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~G 216 (251)
+..+++ +.+++.. +....+.++..++ .+++++|+..+ .+++.+| ..|+||||+|+..|+.++|++|+++|
T Consensus 61 v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~g--a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 134 (244)
T 3ui2_A 61 LSQLLE-DRDVDAVDENGRTALLFVAGLGS---DKCVRLLAEAG--ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 134 (244)
T ss_dssp HHHTTT-TCCTTCBCTTSCBHHHHHHHHTC---HHHHHHHHHTT--CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHc-CCCCCCcCCCCCCHHHHHHHCCC---HHHHHHHHHcC--CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 333344 4444443 4455666665544 56777777776 6778787 78999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHH----------------HcCCHHHHHHHHhC
Q 025512 217 AAVTLQNMDGKTPIDVAK----------------LNSQHDVLKLLEKD 248 (251)
Q Consensus 217 ad~~~~d~~G~TpL~~A~----------------~~g~~~iv~~Ll~~ 248 (251)
++++.+|..|+||||+|+ ..|+.+++++|+++
T Consensus 135 a~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 135 ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp CCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 999999999999999988 66889999999874
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=121.78 Aligned_cols=137 Identities=20% Similarity=0.222 Sum_probs=98.6
Q ss_pred hhchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCccC---cHHHHHHHHhcC-CCcHHHHHH
Q 025512 108 TTQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKKD---QIEERMAKIKED-PSLKPILDE 176 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~l~~ 176 (251)
..++.++++.|++.+..+...+..+...+ +...+..+++.+.+++..+ ....+.++.... ..+. ++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~---~~ 161 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT---RL 161 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH---HH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH---HH
Confidence 45666777777776554433222221110 1146666777777766543 445555554544 3343 44
Q ss_pred HHhcCCCccccccCC-CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 177 IESGGPSAMMKYWND-KDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 177 L~~~~~~~~v~~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
|...+ .+++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 162 L~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 162 LLTFN--VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp HHHTT--CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHhcC--CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 55555 56777776 8999999999999999999999999999999999999999999999999999999864
No 90
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.62 E-value=8e-16 Score=127.51 Aligned_cols=164 Identities=13% Similarity=-0.000 Sum_probs=112.6
Q ss_pred chHHHHHHHHHhhhcCCCCCCCCCc---cchhchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCC
Q 025512 81 PAFNSMAEQLQKTLHGANAEESIPQ---FDTTQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTN 150 (251)
Q Consensus 81 ~~f~~i~~~l~~~~~~~~~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~ 150 (251)
..+..+..++..+++.... .+... ....|+.++++.|++.++.++..+..+...+ +...+..+++.+++
T Consensus 42 g~~~~v~~Ll~~g~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 120 (285)
T 3kea_A 42 NNVRLVCTLLNAGALKNLL-ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR 120 (285)
T ss_dssp TCHHHHHHHHHTTGGGSCC-TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG
T ss_pred CCHHHHHHHHhCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 3455566666666663211 12212 2245667777778777765543333322211 11567777888888
Q ss_pred CCccCcHH-HHHHHHhcCCCcHHHHHHHHhcCCCccccccCC-CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Q 025512 151 PTKKDQIE-ERMAKIKEDPSLKPILDEIESGGPSAMMKYWND-KDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKT 228 (251)
Q Consensus 151 ~~~~~~~~-~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~T 228 (251)
++..+..+ .+...++...+..+++++|+..+.. + .+. .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 121 ~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~--~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t 196 (285)
T 3kea_A 121 LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS--T--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI 196 (285)
T ss_dssp GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT--T--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCC
T ss_pred CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc--c--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCC
Confidence 87766544 2333333334456788888887632 2 233 8999999999999999999999999999999999999
Q ss_pred H-HHHHHHcCCHHHHHHHHhCC
Q 025512 229 P-IDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 229 p-L~~A~~~g~~~iv~~Ll~~~ 249 (251)
| ||+|+..|+.+++++|+++.
T Consensus 197 ~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 197 PDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp TTHHHHHHHTCHHHHHHHTTSC
T ss_pred hHHHHHHHcCCHHHHHHHHHcC
Confidence 8 99999999999999999863
No 91
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.62 E-value=5e-15 Score=127.31 Aligned_cols=179 Identities=17% Similarity=0.149 Sum_probs=116.3
Q ss_pred hHHHHHHHHhcCchHHHH-----HHHHHhhhcCCC-CCCCCCc---cchhchHHHHHHHHcCCcchHHHHHhhhhcc---
Q 025512 69 SIKELAEQIAKDPAFNSM-----AEQLQKTLHGAN-AEESIPQ---FDTTQYYSTMQQVMQNPQFMTMAERLGNALM--- 136 (251)
Q Consensus 69 ~~~~la~~i~~n~~f~~i-----~~~l~~~~~~~~-~~~~~~~---~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll--- 136 (251)
..+..|...+....+..+ ..++..+++... +..+... ....|+.++++.|++.++.+...+..+...+
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A 206 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA 206 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Confidence 456666666644444333 345566666211 1111111 1244566677777776665443322222111
Q ss_pred ---CC-hHHHHHHHhc---CCC---CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccc--------cCCCCchHHH
Q 025512 137 ---QD-PSMSHMMESL---TNP---TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKY--------WNDKDNTALH 198 (251)
Q Consensus 137 ---~~-~~~~~ll~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~--------~d~~G~TpLh 198 (251)
.. ..+..+++.+ .++ +..+....+.++........+++++|+..+ .+++. .|..|+||||
T Consensus 207 ~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g--~~~~~~~~~~~~~~d~~g~t~Lh 284 (373)
T 2fo1_E 207 AANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG--AKVDYDGAARKDSEKYKGRTALH 284 (373)
T ss_dssp HHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHT--CCSSCCSGGGTSSSSCCCCCTHH
T ss_pred HHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCC--CCcccccccccCcccccCCCHHH
Confidence 11 2344444433 333 344555666666665555788888888877 33443 5778999999
Q ss_pred HHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 199 YAAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 199 ~Aa~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+||++|+++.
T Consensus 285 ~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 336 (373)
T 2fo1_E 285 YAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 336 (373)
T ss_dssp HHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999885 999999999999999999999999999999863
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.61 E-value=2.4e-15 Score=116.37 Aligned_cols=77 Identities=25% Similarity=0.360 Sum_probs=69.6
Q ss_pred CcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 169 SLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 169 ~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
+..+++++|+. + .+++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|++
T Consensus 55 g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 131 (183)
T 3deo_A 55 ADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131 (183)
T ss_dssp TCHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHH
Confidence 34566666777 3 5788899999999999999999999999999999999999 899999999999999999999997
Q ss_pred C
Q 025512 248 D 248 (251)
Q Consensus 248 ~ 248 (251)
+
T Consensus 132 ~ 132 (183)
T 3deo_A 132 L 132 (183)
T ss_dssp H
T ss_pred c
Confidence 5
No 93
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.61 E-value=7.9e-15 Score=120.15 Aligned_cols=141 Identities=19% Similarity=0.207 Sum_probs=105.7
Q ss_pred CchHHHHHHHHHhhhcCCCCCCCCCc-c-chhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccC--
Q 025512 80 DPAFNSMAEQLQKTLHGANAEESIPQ-F-DTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD-- 155 (251)
Q Consensus 80 n~~f~~i~~~l~~~~~~~~~~~~~~~-~-~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~-- 155 (251)
...+..+..+++.+.+ ++ . +..|++.++.+... +.. ..+..+++.+.+++..+
T Consensus 15 ~g~~~~v~~Ll~~g~~--------~~~~~~~~g~t~L~~A~~~-----------g~~----~~v~~Ll~~g~~~~~~~~~ 71 (285)
T 1wdy_A 15 NEDVDLVQQLLEGGAN--------VNFQEEEGGWTPLHNAVQM-----------SRE----DIVELLLRHGADPVLRKKN 71 (285)
T ss_dssp TTCHHHHHHHHHTTCC--------TTCCCTTTCCCHHHHHHHT-----------TCH----HHHHHHHHTTCCTTCCCTT
T ss_pred cCCHHHHHHHHHcCCC--------cccccCCCCCcHHHHHHHc-----------CCH----HHHHHHHHcCCCCcccCCC
Confidence 3456666677777765 34 2 45566666666554 222 45566666666665543
Q ss_pred -cHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CC
Q 025512 156 -QIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQ----------NM 224 (251)
Q Consensus 156 -~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~----------d~ 224 (251)
....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+ +.
T Consensus 72 g~t~L~~A~~~~---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~ 146 (285)
T 1wdy_A 72 GATPFLLAAIAG---SVKLLKLFLSKG--ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK 146 (285)
T ss_dssp CCCHHHHHHHHT---CHHHHHHHHHTT--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTC
T ss_pred CCCHHHHHHHcC---CHHHHHHHHHcC--CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhcc
Confidence 44555555544 456777777776 567888999999999999999999999999999999988 78
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhC
Q 025512 225 DGKTPIDVAKLNSQHDVLKLLEKD 248 (251)
Q Consensus 225 ~G~TpL~~A~~~g~~~iv~~Ll~~ 248 (251)
.|.||||+|+..|+.+++++|+++
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHh
Confidence 899999999999999999999975
No 94
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.61 E-value=2.7e-15 Score=126.70 Aligned_cols=91 Identities=24% Similarity=0.264 Sum_probs=78.4
Q ss_pred cCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 025512 154 KDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 233 (251)
.+....+.++..+ ..+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 57 ~g~t~L~~A~~~g---~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A 131 (351)
T 3utm_A 57 RKSTPLHLAAGYN---RVRIVQLLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEA 131 (351)
T ss_dssp TCCCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCHHHHHHHcC---CHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 3445555555544 467777778776 67888999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCC
Q 025512 234 KLNSQHDVLKLLEKDA 249 (251)
Q Consensus 234 ~~~g~~~iv~~Ll~~~ 249 (251)
+..|+.+++++|+++.
T Consensus 132 ~~~~~~~~v~~Ll~~g 147 (351)
T 3utm_A 132 ASKNRVEVCSLLLSHG 147 (351)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcC
Confidence 9999999999999863
No 95
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.61 E-value=4.1e-15 Score=121.08 Aligned_cols=94 Identities=21% Similarity=0.209 Sum_probs=73.2
Q ss_pred cCcHHHHHHHHhcCCCcHHHHHHHHhcCC---------CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-
Q 025512 154 KDQIEERMAKIKEDPSLKPILDEIESGGP---------SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN- 223 (251)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~L~~~~~---------~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d- 223 (251)
.+....+.++.....+..+++++|+..+. ...++..|..|+||||+|+..|+.++|++|+++|++++.++
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 124 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCE
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccc
Confidence 35566677664423334445555554431 12345556689999999999999999999999999999999
Q ss_pred -------------CCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 224 -------------MDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 224 -------------~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
..|+||||+|+..|+.++|++|++
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 689999999999999999999998
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.61 E-value=3.2e-15 Score=121.15 Aligned_cols=85 Identities=22% Similarity=0.293 Sum_probs=73.8
Q ss_pred HHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHH
Q 025512 162 AKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHD 240 (251)
Q Consensus 162 ~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~~g~~~ 240 (251)
...+...+..+++++|+. + .+++.+|..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+..|+.+
T Consensus 49 L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 49 WWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 125 (244)
T ss_dssp HHHHHTTTCHHHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 333444455677777777 3 5788899999999999999999999999999999999999 88999999999999999
Q ss_pred HHHHHHhCC
Q 025512 241 VLKLLEKDA 249 (251)
Q Consensus 241 iv~~Ll~~~ 249 (251)
+|++|+++.
T Consensus 126 ~v~~Ll~~g 134 (244)
T 3ui2_A 126 VVEALVELG 134 (244)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHCC
Confidence 999999863
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.59 E-value=3.8e-15 Score=118.67 Aligned_cols=89 Identities=21% Similarity=0.208 Sum_probs=76.6
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVA 233 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A 233 (251)
+....+.++..++ .+++++|+..+ .+++.+|..|+||||+|+..|+.++|++|+++ |++++.+|..|+||||+|
T Consensus 73 g~t~L~~A~~~g~---~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 73 IDNPLHEAAKRGN---LSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp ESCHHHHHHHHTC---HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccCc---HHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 3445566665544 56666677765 66888999999999999999999999999999 999999999999999999
Q ss_pred HHcCCHHHHHHHHhC
Q 025512 234 KLNSQHDVLKLLEKD 248 (251)
Q Consensus 234 ~~~g~~~iv~~Ll~~ 248 (251)
+..|+.+||++|+++
T Consensus 148 ~~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 148 AWKGYADIVQLLLAK 162 (222)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHc
Confidence 999999999999975
No 98
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.59 E-value=4.4e-15 Score=121.90 Aligned_cols=92 Identities=15% Similarity=0.091 Sum_probs=77.3
Q ss_pred CccCcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCC--------------CCchHHHHHHHcCCHHHHHHHHH---
Q 025512 152 TKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWND--------------KDNTALHYAAGYGRKECVALLLE--- 214 (251)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~--------------~G~TpLh~Aa~~g~~~~v~~Ll~--- 214 (251)
+..+....+.++..+ ..+++++|+..+ .+++..+. .|+||||+|+..|+.++|++|++
T Consensus 98 d~~g~tpL~~A~~~g---~~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 98 YYKGQTALHIAIERR---NMTLVTLLVENG--ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172 (273)
T ss_dssp TTTTCCHHHHHHHTT---CHHHHHHHHHTT--CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cCCCCCHHHHHHHcC---CHHHHHHHHHCC--CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 345666677666554 456777777776 56777776 79999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhC
Q 025512 215 NGAAVTLQNMDGKTPIDVAKLNSQ---------HDVLKLLEKD 248 (251)
Q Consensus 215 ~Gad~~~~d~~G~TpL~~A~~~g~---------~~iv~~Ll~~ 248 (251)
+|++++.+|..|+||||+|+..|+ .+++++|+++
T Consensus 173 ~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 215 (273)
T 2pnn_A 173 QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL 215 (273)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh
Confidence 999999999999999999999998 7899999874
No 99
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.59 E-value=3.4e-15 Score=102.61 Aligned_cols=58 Identities=41% Similarity=0.602 Sum_probs=54.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 192 KDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 58 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4899999999999999999999999999999999999999999999999999999863
No 100
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.58 E-value=7.7e-15 Score=121.68 Aligned_cols=122 Identities=18% Similarity=0.213 Sum_probs=93.1
Q ss_pred cchhchHHHHHHHHcCCcchHHHHHhhhhccCChHHHHHHHhcCCCCccCc---HHHHHHHHhcCCCcHHHHHHHHhcCC
Q 025512 106 FDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ---IEERMAKIKEDPSLKPILDEIESGGP 182 (251)
Q Consensus 106 ~~~~g~~~l~~~l~~~~~~~~~a~~~~~~ll~~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~~~~~ 182 (251)
++..+.+.++.+... |.. ..+..+++.+.+++..+. ...+.++.. +..+++++|+..+
T Consensus 36 ~~~~~~t~l~~A~~~-----------g~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g- 96 (299)
T 1s70_B 36 VKFDDGAVFLAACSS-----------GDT----EEVLRLLERGADINYANVDGLTALHQACID---DNVDMVKFLVENG- 96 (299)
T ss_dssp CEECHHHHHHHHHHH-----------TCH----HHHHHHHHHCCCTTCBCTTCCBHHHHHHHT---TCHHHHHHHHHTT-
T ss_pred cccCCccHHHHHHHc-----------CCH----HHHHHHHHcCCCCcccCCCCCCHHHHHHHc---CCHHHHHHHHHCC-
Confidence 445566666665544 333 566777777777765543 444444444 4567777777776
Q ss_pred CccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 183 SAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 183 ~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
.+++..|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.+++++|+.
T Consensus 97 -a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 97 -ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 6778889999999999999999999999999999999999999999999999999998887765
No 101
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.57 E-value=1.5e-15 Score=118.26 Aligned_cols=75 Identities=20% Similarity=0.060 Sum_probs=67.3
Q ss_pred HHHHHHHHhcCCCccccccCCCCchHHHHHHHcCC------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHcC-----C
Q 025512 171 KPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGR------KECVALLLENGAAVTLQNMDGK-TPIDVAKLNS-----Q 238 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~------~~~v~~Ll~~Gad~~~~d~~G~-TpL~~A~~~g-----~ 238 (251)
.+++++|+..| +++|.+|..|+||||+|+..|+ .++|++|+++|+|++.+|..|+ ||||+|+..+ +
T Consensus 55 ~~iv~~Ll~~G--advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~ 132 (186)
T 3t8k_A 55 YKISMFLINKG--ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEM 132 (186)
T ss_dssp HHHHHHHHHTT--CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHH
T ss_pred HHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhH
Confidence 46888888887 7899999999999999999997 6899999999999999999999 9999999955 3
Q ss_pred HHHHHHHHh
Q 025512 239 HDVLKLLEK 247 (251)
Q Consensus 239 ~~iv~~Ll~ 247 (251)
.+++++|++
T Consensus 133 ~~iv~~Ll~ 141 (186)
T 3t8k_A 133 IPLYKLIFS 141 (186)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 568999987
No 102
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.56 E-value=2.4e-14 Score=114.44 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=77.3
Q ss_pred hchHHHHHHHHcCCcchHHHHHhhhhcc-------CChHHHHHHHhcCCCCcc----CcHHHHHHHHhcCCCcHHHHHHH
Q 025512 109 TQYYSTMQQVMQNPQFMTMAERLGNALM-------QDPSMSHMMESLTNPTKK----DQIEERMAKIKEDPSLKPILDEI 177 (251)
Q Consensus 109 ~g~~~l~~~l~~~~~~~~~a~~~~~~ll-------~~~~~~~ll~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~L 177 (251)
.|+.++++.|++.+..+...+..+...+ +...+..+++.+.+.... +....+.++..++ .+++++|
T Consensus 19 ~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~---~~~v~~L 95 (240)
T 3eu9_A 19 YGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH---LSMVVQL 95 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC---HHHHHHH
T ss_pred cCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC---HHHHHHH
Confidence 4556677777766554432222221110 114555556665554432 2334444444433 4455555
Q ss_pred HhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhC
Q 025512 178 ESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ-HDVLKLLEKD 248 (251)
Q Consensus 178 ~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~-~~iv~~Ll~~ 248 (251)
+..+ .+++..+..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..++ .+++++|+++
T Consensus 96 l~~g--~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~ 165 (240)
T 3eu9_A 96 MKYG--ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165 (240)
T ss_dssp HHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT
T ss_pred HHcC--CCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc
Confidence 5554 4456666777777777777777777777777777777777777777777775554 5666666654
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.56 E-value=2.2e-14 Score=103.27 Aligned_cols=87 Identities=31% Similarity=0.426 Sum_probs=74.2
Q ss_pred HHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 025512 158 EERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 237 (251)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 237 (251)
..+.++..++ .+++++|+..+ .+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 5 ~L~~A~~~~~---~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 5 PLHLAARNGH---LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp HHHHHHHHTC---HHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCc---HHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 3444444443 56666677665 567888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCC
Q 025512 238 QHDVLKLLEKDA 249 (251)
Q Consensus 238 ~~~iv~~Ll~~~ 249 (251)
+.+++++|+++.
T Consensus 80 ~~~~~~~Ll~~g 91 (126)
T 1n0r_A 80 HLEVVKLLLEAG 91 (126)
T ss_dssp CHHHHHHHHHTT
T ss_pred hHHHHHHHHHcC
Confidence 999999999863
No 104
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.55 E-value=1.8e-15 Score=114.07 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=75.6
Q ss_pred CcHHHHHHHHhcCCCcHHHHHHHHhcCCCccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc-HHHHH
Q 025512 155 DQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKT-PIDVA 233 (251)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~T-pL~~A 233 (251)
+....+.++..++ .+++++|+..+ .+++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 12 ~~t~L~~A~~~g~---~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 12 SADWLATAAARGR---VEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp STTHHHHHHHHTC---HHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred chHHHHHHHHcCC---HHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3445566665544 56777777776 678889999999999985 99999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHhC
Q 025512 234 KLNSQHDVLKLLEKD 248 (251)
Q Consensus 234 ~~~g~~~iv~~Ll~~ 248 (251)
+..|+.+++++|+++
T Consensus 86 ~~~~~~~~v~~Ll~~ 100 (156)
T 1bi7_B 86 AREGFLDTLVVLHRA 100 (156)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHc
Confidence 999999999999975
No 105
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.54 E-value=4.6e-15 Score=125.37 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=81.2
Q ss_pred hHHHHHHHhcCCCCccC---cHHHHHHHHhcC----CCcHHHHHHHHhcCCCccccccCCCCchHHHHHHH----cCCHH
Q 025512 139 PSMSHMMESLTNPTKKD---QIEERMAKIKED----PSLKPILDEIESGGPSAMMKYWNDKDNTALHYAAG----YGRKE 207 (251)
Q Consensus 139 ~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~l~~L~~~~~~~~v~~~d~~G~TpLh~Aa~----~g~~~ 207 (251)
..+..+++.+++++..+ ....+.++..++ ..+..+++++. .+++.+|..|+||||+|+. .|+.+
T Consensus 145 ~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~-----~~~~~~d~~g~tpLh~A~~~~~~~g~~~ 219 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY-----PCLILEDSMNRTILHHIIITSGMTGCSA 219 (327)
T ss_dssp HHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG-----GGGGEECTTCCCHHHHHHHHHTSTTCHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh-----ccccCCCCCCCCHHHHHHHHccccccHH
Confidence 56777888888887654 445566665544 23334443332 3578889999999999999 89999
Q ss_pred HHHHHHHCCC---------------------------------------------CCCCCCCCCCcHHHHHHHcCCHHHH
Q 025512 208 CVALLLENGA---------------------------------------------AVTLQNMDGKTPIDVAKLNSQHDVL 242 (251)
Q Consensus 208 ~v~~Ll~~Ga---------------------------------------------d~~~~d~~G~TpL~~A~~~g~~~iv 242 (251)
++++|++.++ +++.+|..|+||||+|+..|+.++|
T Consensus 220 ~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v 299 (327)
T 1sw6_A 220 AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIV 299 (327)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 9999988753 6888899999999999999999999
Q ss_pred HHHHhCC
Q 025512 243 KLLEKDA 249 (251)
Q Consensus 243 ~~Ll~~~ 249 (251)
++|+++.
T Consensus 300 ~~Ll~~G 306 (327)
T 1sw6_A 300 DALLDYG 306 (327)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999863
No 106
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.53 E-value=4.9e-15 Score=125.19 Aligned_cols=76 Identities=17% Similarity=0.216 Sum_probs=63.9
Q ss_pred cHHHHHHHHhcCCCccccc-cCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHH
Q 025512 170 LKPILDEIESGGPSAMMKY-WNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ---HDVLKLL 245 (251)
Q Consensus 170 ~~~~l~~L~~~~~~~~v~~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~---~~iv~~L 245 (251)
..+++++|...+ .++|. +|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+ .++++.|
T Consensus 109 ~~~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 109 LQEVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHHHCTTSC--CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred HHHHHHHHHhcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 345666666665 67888 89999999999999999999999999999999999999999999999988 4444444
Q ss_pred Hh
Q 025512 246 EK 247 (251)
Q Consensus 246 l~ 247 (251)
++
T Consensus 187 l~ 188 (327)
T 1sw6_A 187 LD 188 (327)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.53 E-value=5.7e-14 Score=120.47 Aligned_cols=188 Identities=18% Similarity=0.206 Sum_probs=113.7
Q ss_pred cccccccccCCC---hhHHHHHHHHhcCchHHHHHHHHHhhhcCCCCCCCCCccchhchHHHHHHHHcCCcchHHHHHh-
Q 025512 56 FDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERL- 131 (251)
Q Consensus 56 ~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~a~~~- 131 (251)
+|+|+|+|+..| ++.+++++.+| |..+|+++|..-.......+. |..........+........++......
T Consensus 80 ~~~s~v~s~~~d~w~~~~~~~~~~~g-n~~~n~~~e~~~~~~~~~kp~---~~~~~~~re~fIr~KY~~k~f~~~l~~~~ 155 (368)
T 3jue_A 80 VHFSKVRSLTLDSWEPELVKLMCELG-NVIINQIYEARVEAMAVKKPG---PSCSRQEKEAWIHAKYVEKKFLTKLPEIR 155 (368)
T ss_dssp TTTCCEEETTTSCCCHHHHHHHHHSC-HHHHHHHHTTTTTTTTCCCCC---TTSCHHHHHHHHHHHHTSCTTCCSCC---
T ss_pred CCcCeeEEeecccccHHHHHHHHHHc-cHHHHHHHHhhcccccCcCCC---CCCCHHHHHHHHHHHHHhhcccccchhhh
Confidence 689999999887 88899999998 999999988622211100110 1112222222333333333322110000
Q ss_pred ----h--hhccCC---hHHHHHHH--------hcCCCCccCcHHHHHHHHhcCC-CcHHHHHHHHhcCCCccccccC--C
Q 025512 132 ----G--NALMQD---PSMSHMME--------SLTNPTKKDQIEERMAKIKEDP-SLKPILDEIESGGPSAMMKYWN--D 191 (251)
Q Consensus 132 ----~--~~ll~~---~~~~~ll~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~L~~~~~~~~v~~~d--~ 191 (251)
+ ...-+. |.....-. ..................+... ...+++.+|+..+ .+++..+ .
T Consensus 156 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~G--advn~~~~~~ 233 (368)
T 3jue_A 156 GRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHG--ADVNWVNGGQ 233 (368)
T ss_dssp -----------------------------------------CCHHHHHHHHTSSSCCHHHHHHHHHTT--CCTTCCCTTT
T ss_pred hccccccCcccCCCCCCCcccCCCCccccccccccccccccCCCCcHHHHHHHccCCHHHHHHHHHcC--CCCCcccccc
Confidence 0 000000 00000000 0000011111122233333333 6677777788776 5677777 8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 192 KDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 192 ~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
.|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++.
T Consensus 234 ~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~G 291 (368)
T 3jue_A 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291 (368)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCc
Confidence 8999999999999999999999999999999999999999999999999999999863
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.50 E-value=7.3e-14 Score=115.42 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=68.0
Q ss_pred cCCCcHHHHHHHHhcCCCcc----ccccCCCCchHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 025512 166 EDPSLKPILDEIESGGPSAM----MKYWNDKDNTALHYAAGY---GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 238 (251)
Q Consensus 166 ~~~~~~~~l~~L~~~~~~~~----v~~~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~ 238 (251)
...+...+. .++..+.... ++..|..|+||||+|+.. |+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 139 ~~~d~~~~~-~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 139 KTRDIFGLL-QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HTTCHHHHH-HHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhcccHHHH-HHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence 344444444 3444443222 555688999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 025512 239 HDVLKLLEKDA 249 (251)
Q Consensus 239 ~~iv~~Ll~~~ 249 (251)
.++|++|+++.
T Consensus 218 ~~~v~~Ll~~g 228 (278)
T 1dcq_A 218 AECLKLLLRGK 228 (278)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999863
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.48 E-value=7.5e-14 Score=98.97 Aligned_cols=64 Identities=30% Similarity=0.393 Sum_probs=57.1
Q ss_pred ccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 186 MKYWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 186 v~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
....|.+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g 80 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3445788999999999999999999999999999999999999999999999999999999863
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.46 E-value=1.4e-13 Score=122.69 Aligned_cols=77 Identities=26% Similarity=0.282 Sum_probs=66.2
Q ss_pred HHHHHHHHhcCCCcccccc------CCCCchHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 025512 171 KPILDEIESGGPSAMMKYW------NDKDNTALHYAAG---YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDV 241 (251)
Q Consensus 171 ~~~l~~L~~~~~~~~v~~~------d~~G~TpLh~Aa~---~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~i 241 (251)
...+..|+..| .++|.. |..|+||||+||. .|+.++|++|+++|+++|.+|..|+||||+|+..|+.++
T Consensus 145 ~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~ 222 (497)
T 3lvq_E 145 LLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDC 222 (497)
T ss_dssp HHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHH
T ss_pred HHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHH
Confidence 34444455555 456655 8899999999976 999999999999999999999999999999999999999
Q ss_pred HHHHHhCC
Q 025512 242 LKLLEKDA 249 (251)
Q Consensus 242 v~~Ll~~~ 249 (251)
|++|+++.
T Consensus 223 v~~Ll~~g 230 (497)
T 3lvq_E 223 LKLLLKGR 230 (497)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999863
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.46 E-value=7.5e-14 Score=99.46 Aligned_cols=62 Identities=37% Similarity=0.526 Sum_probs=59.1
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 025512 188 YWNDKDNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 249 (251)
Q Consensus 188 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 249 (251)
++|.+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 46889999999999999999999999999999999999999999999999999999999863
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.45 E-value=3.2e-13 Score=112.82 Aligned_cols=80 Identities=26% Similarity=0.358 Sum_probs=66.7
Q ss_pred CCCcHHHHHHHHhcCCCccccc------cCCCCchHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 025512 167 DPSLKPILDEIESGGPSAMMKY------WNDKDNTALHYAAGY---GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 237 (251)
Q Consensus 167 ~~~~~~~l~~L~~~~~~~~v~~------~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 237 (251)
..+...+.. |+..+ .+++. .+..|+||||+|+.. |+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 161 ~g~~~~v~~-ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g 237 (301)
T 2b0o_E 161 NRDLLSVLE-AFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYN 237 (301)
T ss_dssp TTCHHHHHH-HHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTT
T ss_pred ccCHHHHHH-HHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 344444443 44444 44555 588999999999997 8999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCC
Q 025512 238 QHDVLKLLEKDA 249 (251)
Q Consensus 238 ~~~iv~~Ll~~~ 249 (251)
+.++|++|+++.
T Consensus 238 ~~~~v~~Ll~~g 249 (301)
T 2b0o_E 238 QPDCLKLLLKGR 249 (301)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 999999999863
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.39 E-value=2.5e-14 Score=123.10 Aligned_cols=106 Identities=16% Similarity=0.143 Sum_probs=74.9
Q ss_pred hHHHHHHHhcC------CCCccCcHHHHHHHHhcCCCcHHHHHHHHhcCCC-ccccccCCCCchHHHHHHHcCCHHHHHH
Q 025512 139 PSMSHMMESLT------NPTKKDQIEERMAKIKEDPSLKPILDEIESGGPS-AMMKYWNDKDNTALHYAAGYGRKECVAL 211 (251)
Q Consensus 139 ~~~~~ll~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~-~~v~~~d~~G~TpLh~Aa~~g~~~~v~~ 211 (251)
..+..+++.+. ..+..+....+.++ ..+..+++++|+..+.. ..++..+.+ +||||+||..|+.++|++
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa---~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~ 181 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAA---ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNR 181 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHH---HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHH---HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHH
Confidence 44555555554 22333333334444 44557778888887632 012222233 999999999999999999
Q ss_pred HHHCCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHhC
Q 025512 212 LLENGAAVTL--QNMDGKTPIDVAK-LNSQHDVLKLLEKD 248 (251)
Q Consensus 212 Ll~~Gad~~~--~d~~G~TpL~~A~-~~g~~~iv~~Ll~~ 248 (251)
|+++|++++. +|..|+||||+|+ ..|+.+||++|+++
T Consensus 182 Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ 221 (376)
T 2aja_A 182 LCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221 (376)
T ss_dssp HHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS
T ss_pred HHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC
Confidence 9999999887 8889999999999 99999999999875
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.28 E-value=3.2e-13 Score=116.20 Aligned_cols=125 Identities=11% Similarity=0.102 Sum_probs=86.0
Q ss_pred hhchHHHHHHHHcCCc------chH--------HHHHhhhhccCChHHHHHHHhcCC-----CCccCcHHHHHHHHhcCC
Q 025512 108 TTQYYSTMQQVMQNPQ------FMT--------MAERLGNALMQDPSMSHMMESLTN-----PTKKDQIEERMAKIKEDP 168 (251)
Q Consensus 108 ~~g~~~l~~~l~~~~~------~~~--------~a~~~~~~ll~~~~~~~ll~~~~~-----~~~~~~~~~~~~~~~~~~ 168 (251)
..|+.++++.|++.++ .++ .+...|.. ..+..+++.+++ ....+ .+...++...
T Consensus 101 ~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~----eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~ 173 (376)
T 2aja_A 101 ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHL----HVLNRLCELAPTEIMAMIQAEN---YHAFRLAAEN 173 (376)
T ss_dssp HHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCH----HHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCH----HHHHHHHhCCCCccccccCCCC---CCHHHHHHHC
Confidence 3566677777776654 111 12222322 566666777653 22222 3333334444
Q ss_pred CcHHHHHHHHhcCCCccccc--cCCCCchHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 025512 169 SLKPILDEIESGGPSAMMKY--WNDKDNTALHYAA-GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 245 (251)
Q Consensus 169 ~~~~~l~~L~~~~~~~~v~~--~d~~G~TpLh~Aa-~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 245 (251)
+..+++++|+..+ .+++. .|..|+||||+|+ ..|+.++|++|+++|++ |.||||+|+..|+.+++++|
T Consensus 174 G~~eiv~~Ll~~g--a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 174 GHLHVLNRLCELA--PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp TCHHHHHHHHHSC--GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHH
T ss_pred CCHHHHHHHHHcC--CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHH
Confidence 5677888888887 45555 7888999999999 99999999999998853 89999999999999999999
Q ss_pred HhC
Q 025512 246 EKD 248 (251)
Q Consensus 246 l~~ 248 (251)
+++
T Consensus 245 ~~~ 247 (376)
T 2aja_A 245 ARH 247 (376)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 115
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=75.04 E-value=1.3 Score=27.84 Aligned_cols=27 Identities=26% Similarity=0.554 Sum_probs=13.6
Q ss_pred ccccccCCChhHHHHHHHHhcCchHHHHHHH
Q 025512 59 SAMSGLLNDPSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 59 s~~~sl~~dp~~~~la~~i~~n~~f~~i~~~ 89 (251)
..+...+.||++.. +.+||.+..+.+.
T Consensus 11 e~~~~~m~dPEi~~----im~DP~~~~~lq~ 37 (71)
T 2llw_A 11 ETYQRAMKDPEVAA----IMQDPVMQSILQQ 37 (71)
T ss_dssp HHHHHHHHSHHHHH----HHTCTHHHHHHHH
T ss_pred HHHHHHhcCHHHHH----HhCCHHHHHHHHH
Confidence 33444556665533 4456655544443
No 116
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=71.14 E-value=1.9 Score=31.18 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=28.0
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+++|+|+|+..| ++.+++++.+| |..++++++.
T Consensus 72 G~hISkVkSl~LD~W~~~el~~m~~~G-N~~an~~~ea 108 (147)
T 3dwd_A 72 GVHLSFVRSVTMDKWKDIELEKMKAGG-NAKFREFLES 108 (147)
T ss_dssp CTTTCCEEESCC--CCHHHHHHHHHCC-HHHHHHHHHT
T ss_pred CCCCCccccccccCCCHHHHHHHHHHh-hHHHHHHHHh
Confidence 3589999999888 77788888888 9999998886
No 117
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.27 E-value=1.8 Score=31.21 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=28.8
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+|+|+..| ++.+++++.+| |...|++++.
T Consensus 63 G~hiS~VkSl~ld~w~~~~l~~m~~~G-N~~an~~~e~ 99 (141)
T 2crr_A 63 GVHISRVKSVNLDQWTAEQIQCMQDMG-NTKARLLYEA 99 (141)
T ss_dssp CTTTCCCBCSSSSCCCHHHHHHHHHTH-HHHHHHHGGG
T ss_pred CCCCCeeeECCCCCCCHHHHHHHHHHc-cHHHHHHHHh
Confidence 4689999999887 78888888888 8888888875
No 118
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=69.87 E-value=2.3 Score=30.46 Aligned_cols=35 Identities=11% Similarity=-0.101 Sum_probs=29.5
Q ss_pred CccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 54 NPFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 54 ~~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
-.+|+|+++|+..| ++.+++++.+| |...|++.+.
T Consensus 69 LG~hiS~VrSl~lD~w~~~~l~~m~~~G-N~~an~~~e~ 106 (138)
T 2owa_A 69 MGVHISFVRSSDLDKFTPIQLVRMDIGG-NGRARNYFKQ 106 (138)
T ss_dssp TCTTTCCEEETTTSCCCHHHHHHHHHCC-HHHHHHHHHH
T ss_pred CCCCCCeeeecCcCcCCHHHHHHHHhhc-cHHHHHHHHH
Confidence 35689999999887 77888888888 9999999886
No 119
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=67.65 E-value=2.7 Score=25.51 Aligned_cols=18 Identities=11% Similarity=0.446 Sum_probs=7.4
Q ss_pred cCCChhHHHHHHHHhcCc
Q 025512 64 LLNDPSIKELAEQIAKDP 81 (251)
Q Consensus 64 l~~dp~~~~la~~i~~n~ 81 (251)
++.||.+.....++.+||
T Consensus 17 ~m~dP~~~~~lq~i~~NP 34 (62)
T 2lnm_A 17 AFQNPRVQAALMECSENP 34 (62)
T ss_dssp HTTSHHHHHHHHHHTTCG
T ss_pred HcCCHHHHHHHHHHHHCH
Confidence 334444444444444444
No 120
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=64.50 E-value=2.1 Score=30.57 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=28.0
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+|+|+..| ++.+++++.+| |...|++++.
T Consensus 61 G~hiS~VkSl~ld~w~~~~l~~m~~~G-N~~an~~~e~ 97 (134)
T 2iqj_A 61 GVHISRVKSVNLDQWTQEQIQCMQEMG-NGKANRLYEA 97 (134)
T ss_dssp CTTTCCEEETTTSCCCHHHHHHHHTCH-HHHHHHHHTT
T ss_pred CCCCCceeeccccCCCHHHHHHHHHHc-hHHHHHHHHh
Confidence 4589999999887 77788888888 8888888765
No 121
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=62.13 E-value=4.1 Score=29.94 Aligned_cols=34 Identities=9% Similarity=0.080 Sum_probs=28.0
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+|+|+..| ++.+++++.+| |..+++..+.
T Consensus 56 G~hISkVKSltLD~Wt~e~l~~m~~~G-N~~an~~~e~ 92 (163)
T 3sub_A 56 GVHISIVRSIKMDIFTDEQLKYIDKGG-NKKCQTYLEN 92 (163)
T ss_dssp CTTTCCEEETTTCCCCHHHHHHHHHCC-HHHHHHHHHH
T ss_pred CCCCCeeeeccccCcCHHHHHHHHhhC-HHHHHHHHHH
Confidence 4689999999888 77788888888 8888877766
No 122
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.65 E-value=8.4 Score=27.89 Aligned_cols=34 Identities=12% Similarity=-0.090 Sum_probs=26.7
Q ss_pred ccccccccccCCC----hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND----PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d----p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+|+|+..| ++.++.++.+| |...|++++.
T Consensus 63 G~hiS~VrSl~LD~~W~~~~l~~m~~~G-N~~an~~~e~ 100 (149)
T 2crw_A 63 GVHLSFIRSTELDSNWSWFQLRCMQVGG-NASASSFFHQ 100 (149)
T ss_dssp CTTTCCEECSSSCCCCCHHHHHHHHTTC-HHHHHHHHHH
T ss_pred CCCCCeeeccccCCCCCHHHHHHHHHHh-hHHHHHHHHh
Confidence 4689999999877 46667777677 8888888876
No 123
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=42.37 E-value=10 Score=27.19 Aligned_cols=30 Identities=3% Similarity=-0.020 Sum_probs=25.6
Q ss_pred ccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 59 SAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 59 s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
|+|+|+..| ++.+++++.+| |...|.+++.
T Consensus 62 s~VrSl~ld~w~~~~l~~m~~~G-N~~an~~~e~ 94 (140)
T 2olm_A 62 HRVKSISMTTFTQQEIEFLQKHG-NEVCKQIWLG 94 (140)
T ss_dssp CCEEETTTCCCCHHHHHHHHHCH-HHHHHHHHTT
T ss_pred ceeeecCCCCCCHHHHHHHHHhc-cHHHHHHHHh
Confidence 899999887 78888888888 8888888865
No 124
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=40.85 E-value=13 Score=26.70 Aligned_cols=34 Identities=9% Similarity=-0.119 Sum_probs=27.1
Q ss_pred ccccccccccCCC----hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND----PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d----p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+++|+|+|+..| ++.+++++..| |...+++++.
T Consensus 71 G~hIS~VrSl~LD~~W~~~~l~~m~~~G-N~~an~~~e~ 108 (144)
T 2p57_A 71 GVHLSFIRSTELDSNWNWFQLRCMQVGG-NANATAFFRQ 108 (144)
T ss_dssp CTTTCCEEESSSCCCCCHHHHHHHHHCC-HHHHHHHHHH
T ss_pred CCCCCeeeecccCCCCCHHHHHHHHHhC-HHHHHHHHHH
Confidence 4688999999876 46677777777 8888888886
No 125
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=37.34 E-value=15 Score=30.16 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=28.3
Q ss_pred ccccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 55 PFDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 55 ~~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
.+|+|+++|+..| ++.++.++.+| |..++++++.
T Consensus 71 ~~~~s~v~s~~~~~~~~~~~~~~~~~g-N~~~n~~~e~ 107 (329)
T 3o47_A 71 GVHLSFVRSVTMDKWKDIELEKMKAGG-NAKFREFLES 107 (329)
T ss_dssp CTTTCCEEESSSCCCCHHHHHHHHHCC-HHHHHHHHHT
T ss_pred CCCcCEEeeccccCCCHHHHHHHHHhC-cHHHHHHHHh
Confidence 3589999999887 77788888888 8888888875
No 126
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.18 E-value=1.1e+02 Score=26.00 Aligned_cols=24 Identities=25% Similarity=0.224 Sum_probs=17.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh
Q 025512 224 MDGKTPIDVAKLNSQHDVLKLLEK 247 (251)
Q Consensus 224 ~~G~TpL~~A~~~g~~~iv~~Ll~ 247 (251)
.-|.|-+|+|++..+.+++.+|+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhh
Confidence 357778888888777777776664
No 127
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=32.61 E-value=15 Score=30.94 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=29.1
Q ss_pred cccccccccCCC---hhHHHHHHHHhcCchHHHHHHH
Q 025512 56 FDFSAMSGLLND---PSIKELAEQIAKDPAFNSMAEQ 89 (251)
Q Consensus 56 ~~~s~~~sl~~d---p~~~~la~~i~~n~~f~~i~~~ 89 (251)
+|+|+|+|+..| ++.+++++.+| |..+|.+.+.
T Consensus 68 ~his~v~s~~ld~w~~~~~~~~~~~g-N~~~~~~~e~ 103 (386)
T 3lju_X 68 PQVSKVKSVRLDAWEEAQVEFMASHG-NDAARARFES 103 (386)
T ss_dssp TTTCCEEETTTSCCCHHHHHHHHHSS-HHHHHHHHTT
T ss_pred CccceeeeecccCCCHHHHHHHHHhc-chHHHHHHhc
Confidence 799999999888 78888899988 9989999875
No 128
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=31.99 E-value=8.6 Score=23.92 Aligned_cols=26 Identities=23% Similarity=0.396 Sum_probs=12.8
Q ss_pred ccCCChhHHHHHHHHhcCchHHHHHHHHHh
Q 025512 63 GLLNDPSIKELAEQIAKDPAFNSMAEQLQK 92 (251)
Q Consensus 63 sl~~dp~~~~la~~i~~n~~f~~i~~~l~~ 92 (251)
.|..||++.. +.++|.|.++.+.+++
T Consensus 18 kl~~dP~t~~----~~~DP~~~~~lq~i~~ 43 (71)
T 2llv_A 18 NLKKNPKTSE----MMKDPQLVAKLIGYKQ 43 (71)
T ss_dssp HHHHSSTTHH----HHHSCTHHHHHHHHHH
T ss_pred HHHcChHHHH----HhcCHHHHHHHHHHHH
Confidence 3445554433 3346666555555443
No 129
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=24.84 E-value=73 Score=23.48 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=21.0
Q ss_pred ccC-CChhHHHHHHHHhcCch-HHHHHHHHHhh
Q 025512 63 GLL-NDPSIKELAEQIAKDPA-FNSMAEQLQKT 93 (251)
Q Consensus 63 sl~-~dp~~~~la~~i~~n~~-f~~i~~~l~~~ 93 (251)
.|. ++|.+..+-..+.+||. +..+.+.|.+.
T Consensus 27 ~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~~ 59 (171)
T 2qsf_X 27 SIGLTVEDLLSLRQVVSGNPEALAPLLENISAR 59 (171)
T ss_dssp -CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 576 77888888888888885 34555554443
No 130
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=23.23 E-value=32 Score=17.78 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=6.6
Q ss_pred cCCChhHHHHHHHHh
Q 025512 64 LLNDPSIKELAEQIA 78 (251)
Q Consensus 64 l~~dp~~~~la~~i~ 78 (251)
++.||+.+++++++.
T Consensus 3 ~~~Dp~~K~l~~cL~ 17 (34)
T 3pk1_B 3 VPQDASTKKLSECLK 17 (34)
T ss_dssp ----CTHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH
Confidence 345666666665554
No 131
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=20.50 E-value=77 Score=16.99 Aligned_cols=17 Identities=29% Similarity=0.196 Sum_probs=12.3
Q ss_pred HHHHHHcCCHHHHHHHH
Q 025512 197 LHYAAGYGRKECVALLL 213 (251)
Q Consensus 197 Lh~Aa~~g~~~~v~~Ll 213 (251)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677788888887763
Done!