BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025513
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1WAR7|DNAJ_ACISJ Chaperone protein DnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ PE=3
SV=1
Length = 376
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + D++K A+R A+K+HPD++QG + AEEKFK AY+ L
Sbjct: 9 VLGVPKNA--SDDEIKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEIL 59
>sp|A9BNG6|DNAJ_DELAS Chaperone protein DnaJ OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
DD+K A+R A+K+HPD++QG + AEEKFK AY+ L
Sbjct: 19 DDIKKAYRKLAMKYHPDRNQGDAAREAEEKFKEAKEAYEML 59
>sp|B9MDJ8|DNAJ_ACIET Chaperone protein DnaJ OS=Acidovorax ebreus (strain TPSY) GN=dnaJ
PE=3 SV=1
Length = 376
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + D++K A+R A+K+HPD++QG + AEEKFK AY+ L
Sbjct: 9 VLGVPKNA--SDDELKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEIL 59
>sp|A6LRN5|DNAJ_CLOB8 Chaperone protein DnaJ OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=dnaJ PE=3 SV=1
Length = 377
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K AFR A+K+HPD++QG+++ AEEKFK AY+ L
Sbjct: 19 DEIKRAFRKLAVKYHPDRNQGNAE--AEEKFKEINEAYQVL 57
>sp|B2TLZ8|DNAJ_CLOBB Chaperone protein DnaJ OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=dnaJ PE=3 SV=1
Length = 373
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K AFR A+K+HPDK++G+++ AEEKFK AY+ L
Sbjct: 19 DEIKKAFRKLAIKYHPDKNKGNTE--AEEKFKEINEAYQVL 57
>sp|B2V2I6|DNAJ_CLOBA Chaperone protein DnaJ OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=dnaJ PE=3 SV=1
Length = 373
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K AFR A+K+HPDK++G+++ AEEKFK AY+ L
Sbjct: 19 DEIKKAFRKLAIKYHPDKNKGNTE--AEEKFKEINEAYQVL 57
>sp|Q87BS9|DNAJ_XYLFT Chaperone protein DnaJ OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=dnaJ PE=3 SV=1
Length = 368
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + DD+K A+R A+K+HPD++ G A AE FK C AY+ L
Sbjct: 9 VLGVPRTA--SEDDLKKAYRRCAMKYHPDRNPGD--AAAEAAFKECKEAYEVL 57
>sp|B2I6F5|DNAJ_XYLF2 Chaperone protein DnaJ OS=Xylella fastidiosa (strain M23) GN=dnaJ
PE=3 SV=1
Length = 368
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + DD+K A+R A+K+HPD++ G A AE FK C AY+ L
Sbjct: 9 VLGVPRTA--SEDDLKKAYRRCAMKYHPDRNPGD--AAAEAAFKECKEAYEVL 57
>sp|A7I2G3|DNAJ_CAMHC Chaperone protein DnaJ OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaJ PE=3
SV=1
Length = 359
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
ILG+P D++K AFR ALK+HPD++ G + AEEKFK AY+ L
Sbjct: 7 ILGVPKDADS--DEIKKAFRKLALKYHPDRNAGDKE--AEEKFKEINEAYQVL 55
>sp|B0U3J7|DNAJ_XYLFM Chaperone protein DnaJ OS=Xylella fastidiosa (strain M12) GN=dnaJ
PE=3 SV=1
Length = 368
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + DD+K A+R A+K+HPD++ G A AE FK C AY+ L
Sbjct: 9 VLGVPRTA--SEDDLKKAYRRCAMKYHPDRNPGD--AAAEAAFKECKEAYEVL 57
>sp|Q9PB06|DNAJ_XYLFA Chaperone protein DnaJ OS=Xylella fastidiosa (strain 9a5c) GN=dnaJ
PE=3 SV=1
Length = 368
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + DD+K A+R A+K+HPD++ G A AE FK C AY+ L
Sbjct: 9 VLGVPRTA--SEDDLKKAYRRCAMKYHPDRNPGD--AAAEAAFKECKEAYEVL 57
>sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=dnaJ PE=3 SV=2
Length = 379
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
DD+K A+R A+K+HPDK+QG AEEKFK AY+ L
Sbjct: 21 DDIKKAYRKLAIKYHPDKNQGDK--AAEEKFKEATEAYEIL 59
>sp|Q128K1|DNAJ_POLSJ Chaperone protein DnaJ OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=dnaJ PE=3 SV=1
Length = 380
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 195 LGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
LG+P + DD+K A+R A+K HPD++QG ++EEKFK AY+ L
Sbjct: 10 LGVPKNA--SDDDIKKAYRKLAMKHHPDRNQGDKSKVSEEKFKEAKEAYEVL 59
>sp|Q54ED3|DNJA1_DICDI DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium
discoideum GN=dnaja1 PE=3 SV=1
Length = 459
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 195 LGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
LG+ P D++K A+R A+K+HPDK+QG + AE KFK AY+ L
Sbjct: 11 LGVKPD--CTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVL 60
>sp|P25686|DNJB2_HUMAN DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=1
SV=3
Length = 324
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
IL +P S DD+K A+R AL+WHPDK+ ++ AE+KFK AY+ L
Sbjct: 7 ILDVPRSA--SADDIKKAYRRKALQWHPDKNP-DNKEFAEKKFKEVAEAYEVL 56
>sp|B9KFK6|DNAJ_CAMLR Chaperone protein DnaJ OS=Campylobacter lari (strain RM2100 / D67 /
ATCC BAA-1060) GN=dnaJ PE=3 SV=1
Length = 373
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 208 VKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+K A+R ALK+HPD++QG + AEEKFKL AY+ L
Sbjct: 20 IKKAYRKMALKYHPDRNQGDKE--AEEKFKLVNEAYEVL 56
>sp|P30725|DNAJ_CLOAB Chaperone protein DnaJ OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=dnaJ PE=2 SV=2
Length = 374
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K AFR A+K+HPDK++G+ + AEEKFK AY+ L
Sbjct: 19 DEIKKAFRKLAIKYHPDKNRGNKE--AEEKFKEINEAYQVL 57
>sp|Q9QYI5|DNJB2_MOUSE DnaJ homolog subfamily B member 2 OS=Mus musculus GN=Dnajb2 PE=2
SV=2
Length = 277
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 247
IL +P S DD+K A+R AL+WHPDK+ ++ AE+KFK AY+ L
Sbjct: 7 ILDVPRSA--SPDDIKKAYRKKALQWHPDKNP-DNKEFAEKKFKEVAEAYEVLS 57
>sp|B0SRF0|DNAJ_LEPBP Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1
Length = 375
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K+A+R A+K+HPDK++G + AEEKFK AY+ L
Sbjct: 19 DEIKSAYRKLAIKYHPDKNKGDKE--AEEKFKEATEAYEVL 57
>sp|B0SHT0|DNAJ_LEPBA Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=dnaJ PE=3 SV=1
Length = 375
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K+A+R A+K+HPDK++G + AEEKFK AY+ L
Sbjct: 19 DEIKSAYRKLAIKYHPDKNKGDKE--AEEKFKEATEAYEVL 57
>sp|A1TLH8|DNAJ_ACIAC Chaperone protein DnaJ OS=Acidovorax citrulli (strain AAC00-1)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+P + +++K A+R A+K HPD++QG + AEEKFK AY+ L
Sbjct: 9 VLGVPKNA--SDEEIKKAYRKLAMKHHPDRNQGDAAKPAEEKFKEAKEAYEML 59
>sp|O54946|DNJB6_MOUSE DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1
SV=4
Length = 365
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKQALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|A0Q1R3|DNAJ_CLONN Chaperone protein DnaJ OS=Clostridium novyi (strain NT) GN=dnaJ
PE=3 SV=1
Length = 376
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K A+R A+K+HPD++QG+ + AEEKFK AY+ L
Sbjct: 19 DEIKKAYRKLAMKYHPDRNQGNKE--AEEKFKDINEAYQVL 57
>sp|Q8NHS0|DNJB8_HUMAN DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1
SV=1
Length = 232
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+LG+ S +D+K A+R AL+WHPDK+ + + AE+KFKL AY+ L
Sbjct: 7 VLGVQASA--SPEDIKKAYRKLALRWHPDKNPDNKEE-AEKKFKLVSEAYEVL 56
>sp|Q6AYU3|DNJB6_RAT DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6
PE=1 SV=1
Length = 357
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKQALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|O85213|DNAJ_CAMJE Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=dnaJ PE=3 SV=2
Length = 373
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 208 VKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+K A+R ALK+HPD++QG + AE+KFKL AY+ L
Sbjct: 20 IKKAYRKMALKYHPDRNQGDKE--AEDKFKLVNEAYEVL 56
>sp|Q5HTK3|DNAJ_CAMJR Chaperone protein DnaJ OS=Campylobacter jejuni (strain RM1221)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+ +K A+R ALK+HPD++QG + AE+KFKL AY+ L
Sbjct: 18 ETIKKAYRKMALKYHPDRNQGDKE--AEDKFKLVNEAYEVL 56
>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-b
PE=2 SV=1
Length = 245
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 247
DD+K A+R ALKWHPDK+ + + AE +FK AY+ L
Sbjct: 17 DDIKKAYRRLALKWHPDKNPDNKEE-AERRFKEVAEAYEVLS 57
>sp|A1W0P5|DNAJ_CAMJJ Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=dnaJ PE=3 SV=1
Length = 374
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 208 VKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+K A+R ALK+HPD++QG + AE+KFKL AY+ L
Sbjct: 20 IKKAYRKMALKYHPDRNQGDKE--AEDKFKLVNEAYEVL 56
>sp|A7H2C0|DNAJ_CAMJD Chaperone protein DnaJ OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaJ PE=3
SV=1
Length = 374
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 208 VKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+K A+R ALK+HPD++QG + AE+KFKL AY+ L
Sbjct: 20 IKKAYRKMALKYHPDRNQGDKE--AEDKFKLVNEAYEVL 56
>sp|B1Y787|DNAJ_LEPCP Chaperone protein DnaJ OS=Leptothrix cholodnii (strain ATCC 51168 /
LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1
Length = 385
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
D++K A+R A+K HPD++QG +EEKFK AY+ L
Sbjct: 19 DEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEML 59
>sp|A8FMW6|DNAJ_CAMJ8 Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=dnaJ PE=3
SV=1
Length = 374
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 208 VKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+K A+R ALK+HPD++QG + AE+KFKL AY+ L
Sbjct: 20 IKKAYRKMALKYHPDRNQGDKE--AEDKFKLVNEAYEVL 56
>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2
SV=1
Length = 348
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
ILG+P SG D++K A+R ALK+HPDK++ + AEEKFK AY L
Sbjct: 8 ILGIP-SG-ANEDEIKKAYRKMALKYHPDKNK---EPNAEEKFKEIAEAYDVL 55
>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1
Length = 348
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
ILG+P SG D++K A+R ALK+HPDK++ + AEEKFK AY L
Sbjct: 8 ILGIP-SG-ANEDEIKKAYRKMALKYHPDKNK---EPNAEEKFKEIAEAYDVL 55
>sp|Q5UP23|YR260_MIMIV DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R260 PE=3 SV=1
Length = 398
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFK 237
ILGL PS +D+K A+R A+K+HPDK++G+ + AEE FK
Sbjct: 11 ILGLTPSA--SEEDIKKAYRKLAIKYHPDKNKGNPE--AEEMFK 50
>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1
SV=1
Length = 348
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
ILG+P SG D++K A+R ALK+HPDK++ + AEEKFK AY L
Sbjct: 8 ILGIP-SG-ANEDEIKKAYRKMALKYHPDKNK---EPNAEEKFKEIAEAYDVL 55
>sp|Q4R7Y5|DNJB6_MACFA DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6
PE=2 SV=1
Length = 241
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKLALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a
PE=2 SV=1
Length = 250
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 247
DD+K A+R ALKWHPDK+ ++ AE +FK AY+ L
Sbjct: 17 DDIKKAYRRLALKWHPDKNP-DNKDEAERRFKEVAEAYEVLS 57
>sp|A1VMG1|DNAJ_POLNA Chaperone protein DnaJ OS=Polaromonas naphthalenivorans (strain
CJ2) GN=dnaJ PE=3 SV=1
Length = 380
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+D+K A+R A+K HPD++QG + ++E+KFK AY+ L
Sbjct: 19 EDIKKAYRKLAMKHHPDRNQGDTSKVSEDKFKEAKEAYEML 59
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=dnaJ PE=3
SV=1
Length = 365
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+D+K AFR A KWHPD H ++A AEEKFK AY+ L
Sbjct: 18 EDIKKAFRELAKKWHPDLHP-DNKAEAEEKFKEISEAYEVL 57
>sp|Q0III6|DNJB6_BOVIN DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1
Length = 242
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKLALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|Q5R8H0|DNJB6_PONAB DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKLALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|A8GIL6|CBPA_SERP5 Curved DNA-binding protein OS=Serratia proteamaculans (strain 568)
GN=cbpA PE=3 SV=1
Length = 309
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 193 TILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
ILG+ P+ LK +K A+R A K+HPD S+++ AEE+FKL AY+ L
Sbjct: 8 AILGVKPADDLKA--IKTAYRRLARKYHPDV---STESNAEEQFKLVAEAYEVL 56
>sp|O75190|DNJB6_HUMAN DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1
SV=2
Length = 326
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE KFK AY+ L A
Sbjct: 17 EDIKKAYRKLALKWHPDKNP-ENKEEAERKFKQVAEAYEVLSDA 59
>sp|Q6PGY5|DJC21_DANRE DnaJ homolog subfamily C member 21 OS=Danio rerio GN=dnajc21 PE=2
SV=1
Length = 545
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
DD+K A+R ALKWHPDK+ +++ AE+ FKL AY L
Sbjct: 17 DDLKKAYRKLALKWHPDKNLDNAEDAAEQ-FKLIQAAYDVL 56
>sp|A2SIR5|DNAJ_METPP Chaperone protein DnaJ OS=Methylibium petroleiphilum (strain PM1)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+D+K A+R A+K HPD++QG AEE FK AY+ L
Sbjct: 19 EDIKKAYRKLAMKHHPDRNQGDGAKKAEESFKEAKEAYEML 59
>sp|Q7M9T3|DNAJ_WOLSU Chaperone protein DnaJ OS=Wolinella succinogenes (strain ATCC 29543
/ DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=dnaJ
PE=3 SV=1
Length = 374
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
+++K A+R A+K+HPD+++GSS+ AEE FK AY+ L
Sbjct: 19 EEIKKAYRKMAMKYHPDRNEGSSE--AEEMFKRVNEAYQVL 57
>sp|P78004|DNAJ_MYCPN Chaperone protein DnaJ OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=dnaJ PE=3 SV=1
Length = 390
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 194 ILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG---SSQAMAEEKFKLCLNAYKSL 246
+LG+ S + D+K AFR A+++HPD+H+G + Q EEKFK AY+ L
Sbjct: 11 VLGVSRSATAQ--DIKRAFRKLAMQYHPDRHKGEGETVQKQNEEKFKEVNEAYEVL 64
>sp|Q5F3Z5|DNJB6_CHICK DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249
+D+K A+R ALKWHPDK+ ++ AE++FK AY+ L A
Sbjct: 17 EDIKKAYRKLALKWHPDKNP-ENKEEAEQQFKQVAEAYEVLSDA 59
>sp|Q4QJW5|DNAJ_HAEI8 Chaperone protein DnaJ OS=Haemophilus influenzae (strain 86-028NP)
GN=dnaJ PE=3 SV=1
Length = 381
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 206 DDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSL 246
DD+K A++ A K HPDK+QGS + AEEKFK AY+ L
Sbjct: 19 DDIKRAYKRLASKHHPDKNQGSKE--AEEKFKEINEAYEVL 57
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,523,921
Number of Sequences: 539616
Number of extensions: 3935300
Number of successful extensions: 11612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 510
Number of HSP's that attempted gapping in prelim test: 11253
Number of HSP's gapped (non-prelim): 809
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)