Query 025513
Match_columns 251
No_of_seqs 214 out of 1511
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 06:37:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025513.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025513hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 2.6E-19 5.6E-24 170.0 6.6 61 187-251 2-62 (371)
2 KOG0713 Molecular chaperone (D 99.7 8.1E-18 1.8E-22 157.5 6.0 62 186-251 13-74 (336)
3 PRK14288 chaperone protein Dna 99.6 2.2E-16 4.7E-21 149.3 5.9 59 189-251 3-61 (369)
4 smart00271 DnaJ DnaJ molecular 99.6 7.8E-16 1.7E-20 108.3 7.2 59 190-251 2-60 (60)
5 PRK14296 chaperone protein Dna 99.6 3E-16 6.5E-21 148.6 6.3 59 188-251 3-61 (372)
6 cd06257 DnaJ DnaJ domain or J- 99.6 2.3E-15 4.9E-20 104.0 6.7 55 190-248 1-55 (55)
7 PRK14279 chaperone protein Dna 99.6 1.2E-15 2.7E-20 145.3 6.9 59 189-251 9-67 (392)
8 PRK14286 chaperone protein Dna 99.6 1.1E-15 2.3E-20 144.7 6.3 60 188-251 3-62 (372)
9 PRK14282 chaperone protein Dna 99.6 3E-15 6.5E-20 141.4 6.8 61 188-251 3-63 (369)
10 PTZ00037 DnaJ_C chaperone prot 99.6 2.9E-15 6.3E-20 144.4 6.6 56 188-251 27-82 (421)
11 PRK14287 chaperone protein Dna 99.6 3.3E-15 7E-20 141.4 6.3 59 188-251 3-61 (371)
12 PF00226 DnaJ: DnaJ domain; I 99.6 6.1E-15 1.3E-19 105.5 5.5 58 190-250 1-58 (64)
13 PRK14297 chaperone protein Dna 99.6 5.4E-15 1.2E-19 140.1 6.7 60 188-251 3-62 (380)
14 PRK14285 chaperone protein Dna 99.6 5.6E-15 1.2E-19 139.6 6.8 59 189-251 3-61 (365)
15 PRK14283 chaperone protein Dna 99.5 4.7E-15 1E-19 140.4 6.2 59 188-251 4-62 (378)
16 PRK14276 chaperone protein Dna 99.5 4.5E-15 9.8E-20 140.8 6.0 59 188-251 3-61 (380)
17 PRK14277 chaperone protein Dna 99.5 5.3E-15 1.2E-19 140.5 6.4 59 189-251 5-63 (386)
18 PRK14295 chaperone protein Dna 99.5 6.1E-15 1.3E-19 140.5 6.5 59 189-251 9-67 (389)
19 PRK14294 chaperone protein Dna 99.5 6.1E-15 1.3E-19 139.1 6.4 61 187-251 2-62 (366)
20 PRK14301 chaperone protein Dna 99.5 7.2E-15 1.6E-19 139.2 6.7 60 188-251 3-62 (373)
21 PRK14299 chaperone protein Dna 99.5 5.9E-15 1.3E-19 135.4 5.8 58 188-250 3-60 (291)
22 PRK10767 chaperone protein Dna 99.5 9.1E-15 2E-19 137.9 6.8 60 188-251 3-62 (371)
23 PRK14280 chaperone protein Dna 99.5 7.3E-15 1.6E-19 139.2 6.1 59 188-251 3-61 (376)
24 PRK14278 chaperone protein Dna 99.5 9.3E-15 2E-19 138.7 6.3 58 189-251 3-60 (378)
25 PRK14298 chaperone protein Dna 99.5 1.1E-14 2.5E-19 138.1 5.9 58 189-251 5-62 (377)
26 KOG0717 Molecular chaperone (D 99.5 1.2E-14 2.7E-19 140.8 6.1 60 188-250 7-66 (508)
27 PRK14281 chaperone protein Dna 99.5 1.7E-14 3.6E-19 137.7 6.3 59 189-251 3-61 (397)
28 PRK14291 chaperone protein Dna 99.5 1.5E-14 3.2E-19 137.4 5.7 58 189-251 3-60 (382)
29 PRK10266 curved DNA-binding pr 99.5 2.7E-14 5.8E-19 131.8 5.8 59 188-251 3-61 (306)
30 PRK14289 chaperone protein Dna 99.5 4E-14 8.6E-19 134.3 6.5 60 188-251 4-63 (386)
31 PRK14290 chaperone protein Dna 99.5 4.1E-14 8.9E-19 133.5 6.5 60 189-251 3-62 (365)
32 KOG0716 Molecular chaperone (D 99.5 5.2E-14 1.1E-18 129.0 5.9 60 188-251 30-89 (279)
33 KOG0691 Molecular chaperone (D 99.5 4.8E-14 1E-18 130.9 5.5 59 188-250 4-62 (296)
34 KOG0715 Molecular chaperone (D 99.5 5.9E-14 1.3E-18 129.5 5.8 58 189-251 43-100 (288)
35 KOG0718 Molecular chaperone (D 99.4 7E-14 1.5E-18 136.0 5.6 62 188-251 8-70 (546)
36 PRK14300 chaperone protein Dna 99.4 8.3E-14 1.8E-18 131.9 5.6 58 189-251 3-60 (372)
37 PRK14293 chaperone protein Dna 99.4 1.4E-13 3E-18 130.3 5.8 58 189-251 3-60 (374)
38 COG2214 CbpA DnaJ-class molecu 99.4 3.2E-13 7E-18 111.6 6.1 60 188-250 5-64 (237)
39 KOG0719 Molecular chaperone (D 99.4 2.7E-13 5.8E-18 122.6 4.7 64 185-250 10-73 (264)
40 PTZ00341 Ring-infected erythro 99.4 7.6E-13 1.6E-17 137.6 6.8 60 187-251 571-630 (1136)
41 PRK05014 hscB co-chaperone Hsc 99.3 1.8E-12 3.9E-17 111.5 7.0 62 190-251 2-66 (171)
42 KOG0721 Molecular chaperone (D 99.3 1.6E-12 3.4E-17 116.3 6.0 58 189-250 99-156 (230)
43 PRK00294 hscB co-chaperone Hsc 99.3 3.4E-12 7.3E-17 110.4 7.4 66 186-251 1-69 (173)
44 PHA03102 Small T antigen; Revi 99.3 1.2E-12 2.7E-17 111.4 4.1 56 189-250 5-60 (153)
45 PRK01356 hscB co-chaperone Hsc 99.3 4.2E-12 9.1E-17 108.9 5.7 62 189-250 2-64 (166)
46 PRK03578 hscB co-chaperone Hsc 99.3 9.8E-12 2.1E-16 107.6 7.5 63 189-251 6-71 (176)
47 PRK09430 djlA Dna-J like membr 99.3 7.2E-12 1.6E-16 114.4 5.9 62 186-249 197-263 (267)
48 PTZ00100 DnaJ chaperone protei 99.2 8.7E-12 1.9E-16 102.0 5.3 55 185-247 61-115 (116)
49 KOG0624 dsRNA-activated protei 99.1 3.3E-11 7.1E-16 115.1 4.3 66 184-251 389-455 (504)
50 KOG0720 Molecular chaperone (D 99.1 4.8E-11 1E-15 116.1 4.5 67 180-251 226-292 (490)
51 KOG0714 Molecular chaperone (D 99.1 8.2E-11 1.8E-15 102.3 3.7 60 189-251 3-62 (306)
52 PHA02624 large T antigen; Prov 99.0 4.5E-10 9.8E-15 113.2 4.2 57 188-250 10-66 (647)
53 PRK01773 hscB co-chaperone Hsc 98.9 1.6E-09 3.6E-14 93.7 6.3 62 189-250 2-66 (173)
54 KOG0722 Molecular chaperone (D 98.9 4.3E-10 9.3E-15 103.4 2.7 59 187-250 31-89 (329)
55 KOG0550 Molecular chaperone (D 98.9 9E-10 2E-14 106.7 3.7 60 188-250 372-431 (486)
56 COG5407 SEC63 Preprotein trans 98.8 5E-09 1.1E-13 102.5 3.9 60 189-250 98-160 (610)
57 KOG1150 Predicted molecular ch 98.7 1.6E-08 3.4E-13 90.4 4.9 59 189-250 53-111 (250)
58 KOG0712 Molecular chaperone (D 98.7 2.2E-08 4.7E-13 94.9 5.2 36 189-226 4-39 (337)
59 PRK14284 chaperone protein Dna 98.6 3.7E-08 8.1E-13 94.1 5.6 36 190-227 2-37 (391)
60 TIGR02349 DnaJ_bact chaperone 98.5 1.3E-07 2.8E-12 88.9 6.4 35 190-226 1-35 (354)
61 PRK14292 chaperone protein Dna 98.5 1.9E-07 4E-12 88.5 6.1 36 189-226 2-37 (371)
62 KOG1789 Endocytosis protein RM 98.2 9E-07 1.9E-11 93.7 4.7 62 182-248 1274-1337(2235)
63 COG5269 ZUO1 Ribosome-associat 98.1 1.4E-06 3E-11 81.3 3.0 66 185-250 39-105 (379)
64 TIGR03835 termin_org_DnaJ term 98.1 5.9E-06 1.3E-10 85.5 6.5 37 189-227 2-38 (871)
65 KOG0568 Molecular chaperone (D 97.8 3.5E-05 7.7E-10 70.8 5.1 54 189-247 47-101 (342)
66 KOG0723 Molecular chaperone (D 97.7 5.2E-05 1.1E-09 61.8 4.8 57 185-249 52-108 (112)
67 COG1076 DjlA DnaJ-domain-conta 96.9 0.00062 1.4E-08 58.5 2.7 56 189-246 113-173 (174)
68 KOG0431 Auxilin-like protein a 96.7 0.0022 4.8E-08 63.2 5.0 45 203-247 400-449 (453)
69 KOG3192 Mitochondrial J-type c 96.5 0.0026 5.5E-08 55.2 3.6 65 187-251 6-73 (168)
70 COG1076 DjlA DnaJ-domain-conta 95.6 0.005 1.1E-07 52.9 1.1 61 190-250 2-65 (174)
71 PF03656 Pam16: Pam16; InterP 90.9 0.27 5.9E-06 41.1 3.6 55 185-247 54-108 (127)
72 PF13446 RPT: A repeated domai 86.2 1.3 2.9E-05 31.6 4.1 30 186-217 2-31 (62)
73 PF14687 DUF4460: Domain of un 84.7 2.4 5.3E-05 34.5 5.4 47 203-249 6-54 (112)
74 TIGR00714 hscB Fe-S protein as 84.4 0.83 1.8E-05 39.0 2.7 23 229-251 32-54 (157)
75 PF07709 SRR: Seven Residue Re 32.4 27 0.00058 18.5 1.0 13 235-247 2-14 (14)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=2.6e-19 Score=170.00 Aligned_cols=61 Identities=34% Similarity=0.516 Sum_probs=57.4
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 187 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 187 ~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
...|||+||||+++| +.+|||+|||+||++||||+|++. ++|+++|++|++||+||+||+|
T Consensus 2 ~~~dyYeiLGV~k~A--s~~EIKkAYRkLA~kyHPD~n~g~--~~AeeKFKEI~eAYEVLsD~eK 62 (371)
T COG0484 2 AKRDYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNPGD--KEAEEKFKEINEAYEVLSDPEK 62 (371)
T ss_pred CccchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhCCHHH
Confidence 357999999999999 999999999999999999999974 6999999999999999999975
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=8.1e-18 Score=157.51 Aligned_cols=62 Identities=34% Similarity=0.510 Sum_probs=58.4
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 186 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 186 ~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
...+|+|+||||+++| +..+||+|||+||++||||+|+++ +.|.++|+.|+.||+||+||.+
T Consensus 13 ~~~rDfYelLgV~k~A--sd~eIKkAYRKLALk~HPDkNpdd--p~A~e~F~~in~AYEVLsDpek 74 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNA--SDQEIKKAYRKLALKYHPDKNPDD--PNANEKFKEINAAYEVLSDPEK 74 (336)
T ss_pred hcCCCHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhcCHHH
Confidence 3458999999999999 999999999999999999999998 7999999999999999999964
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=2.2e-16 Score=149.33 Aligned_cols=59 Identities=37% Similarity=0.528 Sum_probs=55.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 3 ~dyY~vLgv~~~A--s~~eIkkayrkla~k~HPD~~~~~--~~a~~~f~~i~~AYevLsd~~k 61 (369)
T PRK14288 3 LSYYEILEVEKHS--NQETIKKSYRKLALKYHPDRNAGD--KEAEEKFKLINEAYGVLSDEKK 61 (369)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--cHHHHHHHHHHHHHHHhccHHH
Confidence 6899999999999 999999999999999999999864 4689999999999999999864
No 4
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.63 E-value=7.8e-16 Score=108.29 Aligned_cols=59 Identities=44% Similarity=0.668 Sum_probs=55.0
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
++|+||||++++ +.++|++||+++++.+|||++++. .+.+++.|++|++||++|+||.+
T Consensus 2 ~~y~vLgl~~~~--~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 2 DYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCCC
Confidence 799999999999 999999999999999999999864 46899999999999999999864
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3e-16 Score=148.59 Aligned_cols=59 Identities=20% Similarity=0.293 Sum_probs=55.0
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++. .|+++|++|++||++|+||.|
T Consensus 3 ~~dyY~~Lgv~~~a--~~~eik~ayrkla~~~HPD~n~~~---~a~~~F~~i~~AyevLsD~~K 61 (372)
T PRK14296 3 KKDYYEVLGVSKTA--SEQEIRQAYRKLAKQYHPDLNKSP---DAHDKMVEINEAADVLLDKDK 61 (372)
T ss_pred CCCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---hHHHHHHHHHHHHHHhcCHHH
Confidence 46999999999999 999999999999999999999753 689999999999999999964
No 6
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.60 E-value=2.3e-15 Score=104.02 Aligned_cols=55 Identities=44% Similarity=0.675 Sum_probs=51.8
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcc
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCA 248 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsD 248 (251)
+||+||||++++ +.++|+++|++|++++|||++++. +.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~--~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 589999999999 999999999999999999999874 5789999999999999986
No 7
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.2e-15 Score=145.30 Aligned_cols=59 Identities=29% Similarity=0.421 Sum_probs=55.6
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.|
T Consensus 9 ~Dyy~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vLsD~~K 67 (392)
T PRK14279 9 KDFYKELGVSSDA--SAEEIKKAYRKLARELHPDANPGD--PAAEERFKAVSEAHDVLSDPAK 67 (392)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhcchhh
Confidence 6999999999999 999999999999999999999865 5789999999999999999975
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.1e-15 Score=144.72 Aligned_cols=60 Identities=38% Similarity=0.579 Sum_probs=55.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 62 (372)
T PRK14286 3 ERSYYDILGVSKSA--NDEEIKSAYRKLAIKYHPDKNKGN--KESEEKFKEATEAYEILRDPKK 62 (372)
T ss_pred CCCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhccHHH
Confidence 36899999999999 999999999999999999999864 5789999999999999999864
No 9
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=3e-15 Score=141.36 Aligned_cols=61 Identities=30% Similarity=0.540 Sum_probs=55.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++. ++.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~vL~d~~k 63 (369)
T PRK14282 3 KKDYYEILGVSRNA--TQEEIKRAYKRLVKEWHPDRHPEN-RKEAEQKFKEIQEAYEVLSDPQK 63 (369)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCccc-hhHHHHHHHHHHHHHHHhcChhh
Confidence 46899999999999 999999999999999999999753 24689999999999999999864
No 10
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.57 E-value=2.9e-15 Score=144.41 Aligned_cols=56 Identities=32% Similarity=0.427 Sum_probs=51.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..+||+||||+++| +.++||+|||+||++||||++++ .++|++|++||++|+||.+
T Consensus 27 ~~d~Y~vLGV~~~A--s~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~k 82 (421)
T PTZ00037 27 NEKLYEVLNLSKDC--TTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEK 82 (421)
T ss_pred chhHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHH
Confidence 36899999999999 99999999999999999999853 4899999999999999864
No 11
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.3e-15 Score=141.43 Aligned_cols=59 Identities=34% Similarity=0.527 Sum_probs=54.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~k 61 (371)
T PRK14287 3 KRDYYEVLGVDRNA--SVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQK 61 (371)
T ss_pred CCCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhH
Confidence 36899999999999 99999999999999999999875 3689999999999999999864
No 12
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.55 E-value=6.1e-15 Score=105.55 Aligned_cols=58 Identities=40% Similarity=0.631 Sum_probs=53.8
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
++|+||||++++ +.++|+++|+++++.+|||++++.. ..+++.|..|++||++|++|.
T Consensus 1 ~~y~iLgl~~~~--~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~ 58 (64)
T PF00226_consen 1 NPYEILGLPPDA--SDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPE 58 (64)
T ss_dssp HHHHHCTSTTTS--SHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHH
T ss_pred ChHHHCCCCCCC--CHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHH
Confidence 589999999999 9999999999999999999988863 569999999999999999974
No 13
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.4e-15 Score=140.14 Aligned_cols=60 Identities=42% Similarity=0.602 Sum_probs=55.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 62 (380)
T PRK14297 3 SKDYYEVLGLEKGA--SDDEIKKAFRKLAIKYHPDKNKGN--KEAEEKFKEINEAYQVLSDPQK 62 (380)
T ss_pred CCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcCHhh
Confidence 36899999999999 999999999999999999999864 5799999999999999999864
No 14
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.6e-15 Score=139.57 Aligned_cols=59 Identities=37% Similarity=0.559 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 61 (365)
T PRK14285 3 RDYYEILGLSKGA--SKDEIKKAYRKIAIKYHPDKNKGN--KEAESIFKEATEAYEVLIDDNK 61 (365)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHcCcch
Confidence 6899999999999 999999999999999999999865 5789999999999999999864
No 15
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.7e-15 Score=140.41 Aligned_cols=59 Identities=32% Similarity=0.433 Sum_probs=55.0
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 4 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~k 62 (378)
T PRK14283 4 KRDYYEVLGVDRNA--DKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEK 62 (378)
T ss_pred cCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHH
Confidence 46999999999999 99999999999999999999985 3799999999999999999864
No 16
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.5e-15 Score=140.75 Aligned_cols=59 Identities=31% Similarity=0.477 Sum_probs=54.8
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++. .|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~k 61 (380)
T PRK14276 3 NTEYYDRLGVSKDA--SQDEIKKAYRKLSKKYHPDINKEP---GAEEKYKEVQEAYETLSDPQK 61 (380)
T ss_pred CCCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---CHHHHHHHHHHHHHHhcCHhh
Confidence 36899999999999 999999999999999999999864 689999999999999999864
No 17
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.3e-15 Score=140.53 Aligned_cols=59 Identities=34% Similarity=0.490 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 5 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 63 (386)
T PRK14277 5 KDYYEILGVDRNA--TEEEIKKAYRRLAKKYHPDLNPGD--KEAEQKFKEINEAYEILSDPQK 63 (386)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhCCHHH
Confidence 6899999999999 999999999999999999999864 4789999999999999999864
No 18
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.1e-15 Score=140.47 Aligned_cols=59 Identities=34% Similarity=0.552 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 9 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 67 (389)
T PRK14295 9 KDYYKVLGVPKDA--TEAEIKKAYRKLAREYHPDANKGD--AKAEERFKEISEAYDVLSDEKK 67 (389)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hhHHHHHHHHHHHHHHHCchhh
Confidence 6999999999999 999999999999999999999764 4689999999999999999964
No 19
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.1e-15 Score=139.13 Aligned_cols=61 Identities=31% Similarity=0.505 Sum_probs=55.8
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 187 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 187 ~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
...|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 2 ~~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~~~~~f~~~~~Ay~vL~d~~~ 62 (366)
T PRK14294 2 VKRDYYEILGVTRDA--SEEEIKKSYRKLAMKYHPDRNPGD--KEAEELFKEAAEAYEVLSDPKK 62 (366)
T ss_pred CCCChHHHhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHhccHHH
Confidence 347999999999999 999999999999999999999864 4689999999999999999863
No 20
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=7.2e-15 Score=139.17 Aligned_cols=60 Identities=33% Similarity=0.529 Sum_probs=55.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~~~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 62 (373)
T PRK14301 3 QRDYYEVLGVSRDA--SEDEIKKAYRKLALQYHPDRNPDN--PEAEQKFKEAAEAYEVLRDAEK 62 (373)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHhCCCcCCCC--hHHHHHHHHHHHHHHHhcchhh
Confidence 36899999999999 999999999999999999999865 5789999999999999999864
No 21
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=5.9e-15 Score=135.40 Aligned_cols=58 Identities=38% Similarity=0.529 Sum_probs=54.1
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..|||+||||++++ +.++||+|||+||++||||++++ +.++++|++|++||++|+||.
T Consensus 3 ~~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~ 60 (291)
T PRK14299 3 YKDYYAILGVPKNA--SQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPE 60 (291)
T ss_pred CCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHH
Confidence 36899999999999 99999999999999999999975 368999999999999999985
No 22
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=9.1e-15 Score=137.94 Aligned_cols=60 Identities=35% Similarity=0.567 Sum_probs=55.3
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 62 (371)
T PRK10767 3 KRDYYEVLGVSRNA--SEDEIKKAYRKLAMKYHPDRNPGD--KEAEEKFKEIKEAYEVLSDPQK 62 (371)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHHHHHHHHhcchhh
Confidence 46899999999999 999999999999999999999864 4689999999999999999863
No 23
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=7.3e-15 Score=139.16 Aligned_cols=59 Identities=32% Similarity=0.479 Sum_probs=54.9
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..+||+||||++++ +.++||+|||+||++||||++++. .|+++|++|++||++|+||.+
T Consensus 3 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~k 61 (376)
T PRK14280 3 KRDYYEVLGVSKSA--SKDEIKKAYRKLSKKYHPDINKEE---GADEKFKEISEAYEVLSDDQK 61 (376)
T ss_pred CCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhccHhH
Confidence 36899999999999 999999999999999999999764 689999999999999999864
No 24
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=9.3e-15 Score=138.66 Aligned_cols=58 Identities=29% Similarity=0.374 Sum_probs=54.3
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~ 60 (378)
T PRK14278 3 RDYYGLLGVSRNA--SDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEK 60 (378)
T ss_pred CCcceecCCCCCC--CHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhh
Confidence 5899999999999 99999999999999999999985 4789999999999999999864
No 25
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.1e-14 Score=138.13 Aligned_cols=58 Identities=41% Similarity=0.591 Sum_probs=54.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 5 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~k 62 (377)
T PRK14298 5 RDYYEILGLSKDA--SVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEK 62 (377)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHh
Confidence 5899999999999 99999999999999999999975 3689999999999999999864
No 26
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=1.2e-14 Score=140.80 Aligned_cols=60 Identities=28% Similarity=0.474 Sum_probs=56.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
...||+||||.+++ +..+||++||+|||+||||++|+. .+.|+++|+.|+.||+|||||.
T Consensus 7 ~~c~YE~L~v~~~a--~d~eik~~YRklALq~HPDknpd~-ieeat~~F~~i~aAYeVLSdp~ 66 (508)
T KOG0717|consen 7 KRCYYEVLGVERDA--DDDEIKKNYRKLALQYHPDKNPDR-IEEATQQFQLIQAAYEVLSDPQ 66 (508)
T ss_pred hhHHHHHhcccccC--CHHHHHHHHHHHHHhhCCCCCCcc-HHHHHHHHHHHHHHHHHhcChH
Confidence 36899999999999 999999999999999999998875 5889999999999999999995
No 27
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.7e-14 Score=137.73 Aligned_cols=59 Identities=37% Similarity=0.535 Sum_probs=54.9
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 61 (397)
T PRK14281 3 RDYYEVLGVSRSA--DKDEIKKAYRKLALKYHPDKNPDN--KEAEEHFKEVNEAYEVLSNDDK 61 (397)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhhhhhh
Confidence 5899999999999 999999999999999999999864 4689999999999999999863
No 28
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.5e-14 Score=137.37 Aligned_cols=58 Identities=34% Similarity=0.491 Sum_probs=54.3
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||++++. .|+++|++|++||++|+||.+
T Consensus 3 ~d~Y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~---~~~~~f~~i~~Ay~vLsd~~k 60 (382)
T PRK14291 3 KDYYEILGVSRNA--TQEEIKKAYRRLARKYHPDFNKNP---EAEEKFKEINEAYQVLSDPEK 60 (382)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc---cHHHHHHHHHHHHHHhcCHHH
Confidence 5899999999999 999999999999999999999863 689999999999999999863
No 29
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.49 E-value=2.7e-14 Score=131.75 Aligned_cols=59 Identities=31% Similarity=0.478 Sum_probs=54.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||++++ +.++||+|||+||++||||++++. .++++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~k~HPD~~~~~---~~~~~f~~i~~Ay~~L~~~~k 61 (306)
T PRK10266 3 LKDYYAIMGVKPTD--DLKTIKTAYRRLARKYHPDVSKEP---DAEARFKEVAEAWEVLSDEQR 61 (306)
T ss_pred cCChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhhhHHH
Confidence 46899999999999 999999999999999999998753 689999999999999999863
No 30
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=4e-14 Score=134.35 Aligned_cols=60 Identities=35% Similarity=0.600 Sum_probs=55.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 4 ~~~~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 63 (386)
T PRK14289 4 KRDYYEVLGVSKTA--TVDEIKKAYRKKAIQYHPDKNPGD--KEAEEKFKEAAEAYDVLSDPDK 63 (386)
T ss_pred cCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHH
Confidence 36999999999999 999999999999999999999865 5799999999999999999863
No 31
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=4.1e-14 Score=133.48 Aligned_cols=60 Identities=43% Similarity=0.637 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||+++| +.++||+|||+||++||||++++. .+.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 62 (365)
T PRK14290 3 KDYYKILGVDRNA--SQEDIKKAFRELAKKWHPDLHPGN-KAEAEEKFKEISEAYEVLSDPQK 62 (365)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hhHHHHHHHHHHHHHHHhcChhh
Confidence 5899999999999 999999999999999999998764 34699999999999999999864
No 32
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=5.2e-14 Score=129.00 Aligned_cols=60 Identities=37% Similarity=0.541 Sum_probs=56.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..+.|+||||++++ +.++||+|||+|+++||||+++++ +++.++|++||.||++|+||.+
T Consensus 30 ~~~LYdVLgl~k~a--t~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD~~k 89 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTA--TKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSDPTK 89 (279)
T ss_pred hhHHHHHhCCCccc--chHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcChhh
Confidence 47899999999999 999999999999999999999986 6899999999999999999864
No 33
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=4.8e-14 Score=130.89 Aligned_cols=59 Identities=32% Similarity=0.539 Sum_probs=55.9
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..|||.||||+.++ +..+|++|||.+|++|||||||++ +.|.++|+.|.+||+||+|+.
T Consensus 4 ~~dyY~lLgi~~~a--t~~eIkKaYr~kaL~~HPDKNp~d--P~A~ekFq~L~eAy~VL~D~~ 62 (296)
T KOG0691|consen 4 DTDYYDLLGISEDA--TDAEIKKAYRKKALQYHPDKNPGD--PQAAEKFQELSEAYEVLSDEE 62 (296)
T ss_pred cchHHHHhCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHhcCHH
Confidence 36899999999999 999999999999999999999998 469999999999999999985
No 34
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=5.9e-14 Score=129.51 Aligned_cols=58 Identities=33% Similarity=0.489 Sum_probs=55.3
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.+||+||||++++ ++.|||+||++||++||||.+.+. .|+++|++|.+||++|+|+++
T Consensus 43 ~d~Y~vLgv~~~A--t~~EIK~Af~~LaKkyHPD~n~~~---~a~~kF~eI~~AYEiLsd~eK 100 (288)
T KOG0715|consen 43 EDYYKVLGVSRNA--TLSEIKSAFRKLAKKYHPDVNKDK---EASKKFKEISEAYEILSDEEK 100 (288)
T ss_pred cchhhhhCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCc---chhhHHHHHHHHHHHhcCHHH
Confidence 4899999999999 999999999999999999999986 899999999999999999864
No 35
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=7e-14 Score=135.98 Aligned_cols=62 Identities=31% Similarity=0.473 Sum_probs=58.0
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHHHHhcccCC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS-SQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~-~k~~AeekFq~I~eAYevLsDp~k 251 (251)
..++|.+|+|+++| +.+||++|||++++.|||||+.++ .++.|++.|++|..|||||+||.+
T Consensus 8 e~e~Ya~LNlpkdA--t~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~k 70 (546)
T KOG0718|consen 8 EIELYALLNLPKDA--TDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQK 70 (546)
T ss_pred hhhHHHHhCCCccc--CHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHH
Confidence 36899999999999 999999999999999999999865 488999999999999999999964
No 36
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=8.3e-14 Score=131.85 Aligned_cols=58 Identities=31% Similarity=0.398 Sum_probs=53.7
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+||++||||+++.. .++++|++|++||++|+|+.+
T Consensus 3 ~~~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~ 60 (372)
T PRK14300 3 QDYYQILGVSKTA--SQADLKKAYLKLAKQYHPDTTDAK---DAEKKFKEINAAYDVLKDEQK 60 (372)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---CHHHHHHHHHHHHHHhhhHhH
Confidence 5899999999999 999999999999999999998753 588999999999999999863
No 37
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=1.4e-13 Score=130.26 Aligned_cols=58 Identities=33% Similarity=0.483 Sum_probs=54.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.|||+||||++++ +.++||+|||+|+++||||+++.. .|+++|++|++||++|+||.+
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~---~a~~~f~~i~~Ay~vL~~~~~ 60 (374)
T PRK14293 3 ADYYEILGVSRDA--DKDELKRAYRRLARKYHPDVNKEP---GAEDRFKEINRAYEVLSDPET 60 (374)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHHHHHHHhchHH
Confidence 5899999999999 999999999999999999998754 688999999999999999863
No 38
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=3.2e-13 Score=111.65 Aligned_cols=60 Identities=42% Similarity=0.686 Sum_probs=55.2
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..++|+||||++++ +..+|++|||+++++||||++++... .++++|+.|++||++|+|+.
T Consensus 5 ~~~~y~iLgv~~~a--s~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~ 64 (237)
T COG2214 5 LLDYYEILGVPPNA--SLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPE 64 (237)
T ss_pred hhhHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHH
Confidence 46899999999999 99999999999999999999998732 59999999999999999974
No 39
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=2.7e-13 Score=122.55 Aligned_cols=64 Identities=25% Similarity=0.408 Sum_probs=58.5
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 185 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 185 ~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
.....++|+||||.+++ +..+|++||++|++.||||+++...+..|.++|+.|+.||+||+|..
T Consensus 10 ~f~~~d~YevLGVer~a--~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDee 73 (264)
T KOG0719|consen 10 SFNKKDLYEVLGVERDA--TDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEE 73 (264)
T ss_pred cccccCHHHHhhhcccC--CHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 34456999999999999 99999999999999999999986667899999999999999999864
No 40
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.36 E-value=7.6e-13 Score=137.64 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=55.4
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 187 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 187 ~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
...+||+||||+++| +..+||+|||+||++||||++++. .|.++|+.|++||++|+||.+
T Consensus 571 ~d~dYYdILGVs~dA--S~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~k 630 (1136)
T PTZ00341 571 PDTLFYDILGVGVNA--DMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDIDK 630 (1136)
T ss_pred CCCChHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHHH
Confidence 347999999999999 999999999999999999999875 588899999999999999863
No 41
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.34 E-value=1.8e-12 Score=111.45 Aligned_cols=62 Identities=23% Similarity=0.346 Sum_probs=54.8
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccCC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 251 (251)
+||+||||++...++..+|+++||+|++++|||++.+.+ +..+.+.|..|++||++|+||.+
T Consensus 2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~ 66 (171)
T PRK05014 2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLK 66 (171)
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhH
Confidence 799999999987668999999999999999999987643 34578899999999999999963
No 42
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.6e-12 Score=116.32 Aligned_cols=58 Identities=33% Similarity=0.509 Sum_probs=54.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
-|+|+||||++++ ++.|||+|||+|++++||||++.. ...++.|..|..||+.|+|++
T Consensus 99 fDPyEILGl~pga--s~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~ 156 (230)
T KOG0721|consen 99 FDPYEILGLDPGA--SEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKK 156 (230)
T ss_pred CCcHHhhCCCCCC--CHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchh
Confidence 6899999999999 999999999999999999999874 478899999999999999975
No 43
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.32 E-value=3.4e-12 Score=110.37 Aligned_cols=66 Identities=27% Similarity=0.390 Sum_probs=58.4
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccCC
Q 025513 186 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 186 ~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 251 (251)
|+..+||++|||++...++..+|+++||+|++++|||++.+.+ +..+.+.+..||+||++|+||.+
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~ 69 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPR 69 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhh
Confidence 3457999999999998889999999999999999999987643 45688899999999999999963
No 44
>PHA03102 Small T antigen; Reviewed
Probab=99.31 E-value=1.2e-12 Score=111.38 Aligned_cols=56 Identities=32% Similarity=0.417 Sum_probs=51.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..+|+||||++++..+.++||+|||++|+++|||++++ +++|++|++||++|+|+.
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~------~e~~k~in~Ay~~L~d~~ 60 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD------EEKMKELNTLYKKFRESV 60 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch------hHHHHHHHHHHHHHhhHH
Confidence 56899999999988899999999999999999999754 479999999999999875
No 45
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.28 E-value=4.2e-12 Score=108.91 Aligned_cols=62 Identities=26% Similarity=0.304 Sum_probs=54.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-QAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-k~~AeekFq~I~eAYevLsDp~ 250 (251)
.+||+||||++...++..+|+++||+|++++|||++.... +..+.+.+..|++||++|+||.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~ 64 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDAL 64 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 5899999999997679999999999999999999987532 4446678999999999999996
No 46
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.27 E-value=9.8e-12 Score=107.60 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=55.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 251 (251)
.+||+||||++...++..+|+++||+|++++|||++...+ +..+.+.+..||+||++|+||.+
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~ 71 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLK 71 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhh
Confidence 6899999999987679999999999999999999987543 34467778999999999999963
No 47
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.25 E-value=7.2e-12 Score=114.40 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=54.2
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----chHHHHHHHHHHHHHHHHhccc
Q 025513 186 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS-----SQAMAEEKFKLCLNAYKSLCAA 249 (251)
Q Consensus 186 ~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~-----~k~~AeekFq~I~eAYevLsDp 249 (251)
+...++|+||||++++ +.++||+|||+|+++||||+..+. ..+.|+++|++|++||++|+..
T Consensus 197 ~~~~~ay~vLgv~~~a--s~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 197 PTLEDAYKVLGVSESD--DDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CcHHhHHHHcCCCCCC--CHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3447999999999999 999999999999999999997431 1467999999999999999853
No 48
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.24 E-value=8.7e-12 Score=102.04 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=48.5
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhc
Q 025513 185 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 247 (251)
Q Consensus 185 ~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLs 247 (251)
.+...++|+||||++++ +.++|+++||+|++++|||+.+. .+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~A--s~~eIkkaYRrLa~~~HPDkgGs------~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTA--SKERIREAHKQLMLRNHPDNGGS------TYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCC------HHHHHHHHHHHHHHh
Confidence 34447899999999999 99999999999999999998532 478999999999995
No 49
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.13 E-value=3.3e-11 Score=115.12 Aligned_cols=66 Identities=29% Similarity=0.402 Sum_probs=61.0
Q ss_pred cCCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHHHHhcccCC
Q 025513 184 CTVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 184 ~~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-k~~AeekFq~I~eAYevLsDp~k 251 (251)
...+.+|||.||||.+++ +..+|.+|||++|++||||-+++.. +..|+.+|..|..|-+||+||++
T Consensus 389 kqs~kRDYYKILGVkRnA--sKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~Ek 455 (504)
T KOG0624|consen 389 KQSGKRDYYKILGVKRNA--SKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEK 455 (504)
T ss_pred HHhccchHHHHhhhcccc--cHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHH
Confidence 356778999999999999 9999999999999999999999874 78899999999999999999864
No 50
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=4.8e-11 Score=116.06 Aligned_cols=67 Identities=28% Similarity=0.356 Sum_probs=59.4
Q ss_pred cccccCCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 180 DDEQCTVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 180 d~~~~~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
+.........|+|.||||++++ +.++||+.||++|...|||||.. +.|+|.|+.|+.||++|+|+.+
T Consensus 226 drl~re~~~~daYsvlGl~~d~--sd~~lKk~Yrk~A~LVhPDKn~~---~~A~Eafk~Lq~Afevig~~~k 292 (490)
T KOG0720|consen 226 DRLSRELNILDAYSALGLPSDC--SDADLKKNYRKKAMLVHPDKNMI---PRAEEAFKKLQVAFEVIGDSVK 292 (490)
T ss_pred HhhhhhhcCCCchhhcCCCCCC--CHHHHHHHHHhhceEeCCCccCC---hhHHHHHHHHHHHHHHhcchhh
Confidence 3344455578999999999999 99999999999999999999985 4899999999999999999864
No 51
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=8.2e-11 Score=102.25 Aligned_cols=60 Identities=38% Similarity=0.574 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 251 (251)
.++|.||||.+.+ +.++|++||+.++++||||+++.. ...|+.+|++|.+||++|+|+.+
T Consensus 3 ~d~~~~l~i~~~a--s~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~k 62 (306)
T KOG0714|consen 3 KDYYKILGIARSA--SEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKK 62 (306)
T ss_pred ccHHHHhCccccc--cHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHH
Confidence 5899999999999 888999999999999999998887 67788899999999999999853
No 52
>PHA02624 large T antigen; Provisional
Probab=98.95 E-value=4.5e-10 Score=113.16 Aligned_cols=57 Identities=32% Similarity=0.388 Sum_probs=51.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..++|+||||++++..+.++||+|||++|++||||++++ +++|++|++||++|+|+.
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd------eekfk~Ln~AYevL~d~~ 66 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD------EEKMKRLNSLYKKLQEGV 66 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc------HHHHHHHHHHHHHHhcHH
Confidence 468999999999887899999999999999999999643 589999999999999864
No 53
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.93 E-value=1.6e-09 Score=93.70 Aligned_cols=62 Identities=21% Similarity=0.203 Sum_probs=56.6
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 250 (251)
.|||++|||++...++...|+++|+.|.+.+|||++...+ +..+.+.-..||+||++|+||.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl 66 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPI 66 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChH
Confidence 5899999999998889999999999999999999987654 5668889999999999999996
No 54
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=4.3e-10 Score=103.42 Aligned_cols=59 Identities=22% Similarity=0.384 Sum_probs=54.3
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 187 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 187 ~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
+..|.|+||||.+++ +..+|.+|||+||+++|||++++. ++.+.|..|..||++|.|..
T Consensus 31 G~enCYdVLgV~Rea--~KseIakAYRqLARrhHPDr~r~~---e~k~~F~~iAtayeilkd~e 89 (329)
T KOG0722|consen 31 GAENCYDVLGVAREA--NKSEIAKAYRQLARRHHPDRNRDP---ESKKLFVKIATAYEILKDNE 89 (329)
T ss_pred cchhHHHHhhhhhhc--cHHHHHHHHHHHHHHhCCcccCCc---hhhhhhhhhhcccccccchh
Confidence 458999999999999 999999999999999999999986 56699999999999999864
No 55
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=9e-10 Score=106.69 Aligned_cols=60 Identities=40% Similarity=0.525 Sum_probs=57.0
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 188 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 188 ~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
..+||.||||..++ +..+|++|||++++.||||++.++ +.+++.+|++|-+||.+|+||.
T Consensus 372 Rkd~ykilGi~~~a--s~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~ 431 (486)
T KOG0550|consen 372 RKDWYKILGISRNA--SDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPM 431 (486)
T ss_pred hhhHHHHhhhhhhc--ccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHH
Confidence 46999999999999 999999999999999999999887 7889999999999999999985
No 56
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.76 E-value=5e-09 Score=102.50 Aligned_cols=60 Identities=30% Similarity=0.442 Sum_probs=55.4
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---CchHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG---SSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~---~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
-|+|+||||..++ +..+||++||+|+.++||||.+. ..+.+.+++++.|++||..|+|..
T Consensus 98 fDPyEILGI~~~t--s~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k 160 (610)
T COG5407 98 FDPYEILGIDQDT--SERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160 (610)
T ss_pred CChHHhhcccCCC--cHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHH
Confidence 4799999999999 99999999999999999999876 457889999999999999999863
No 57
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.70 E-value=1.6e-08 Score=90.44 Aligned_cols=59 Identities=25% Similarity=0.380 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
.++|+||.|.|.. +.++||+.||+|++..|||+|+++ .+.|..+|--|..||..|-|+.
T Consensus 53 LNpfeVLqIdpev--~~edikkryRklSilVHPDKN~Dd-~~rAqkAFdivkKA~k~l~n~~ 111 (250)
T KOG1150|consen 53 LNPFEVLQIDPEV--TDEDIKKRYRKLSILVHPDKNPDD-AERAQKAFDIVKKAYKLLENDK 111 (250)
T ss_pred cChHHHHhcCCCC--CHHHHHHHHHhhheeecCCCCccc-HHHHHHHHHHHHHHHHHHhCHH
Confidence 6899999999999 999999999999999999999987 5789999999999999998763
No 58
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=2.2e-08 Score=94.87 Aligned_cols=36 Identities=39% Similarity=0.697 Sum_probs=34.8
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 226 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 226 (251)
..+|.||||.++| +.+|||+|||+||++||||||++
T Consensus 4 ~~~y~il~v~~~A--s~~eikkayrkla~k~HpDkn~~ 39 (337)
T KOG0712|consen 4 TKLYDILGVSPDA--SEEEIKKAYRKLALKYHPDKNPD 39 (337)
T ss_pred cccceeeccCCCc--CHHHHHHHHHHHHHHhCCCCCcc
Confidence 5799999999999 99999999999999999999997
No 59
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.63 E-value=3.7e-08 Score=94.09 Aligned_cols=36 Identities=39% Similarity=0.704 Sum_probs=34.5
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS 227 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~ 227 (251)
|||+||||++++ +.++||+|||+||++||||++++.
T Consensus 2 d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~ 37 (391)
T PRK14284 2 DYYTILGVSKTA--SPEEIKKAYRKLAVKYHPDKNPGD 37 (391)
T ss_pred CHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc
Confidence 799999999999 999999999999999999999865
No 60
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.54 E-value=1.3e-07 Score=88.90 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=33.5
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 226 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 226 (251)
|||+||||++++ +.++||+|||+||++||||+++.
T Consensus 1 d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~ 35 (354)
T TIGR02349 1 DYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNKD 35 (354)
T ss_pred ChHHhCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 699999999999 99999999999999999999974
No 61
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.49 E-value=1.9e-07 Score=88.53 Aligned_cols=36 Identities=33% Similarity=0.641 Sum_probs=34.4
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 226 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 226 (251)
.|||+||||++++ +.++||+|||+||++||||++++
T Consensus 2 ~d~y~~Lgv~~~a--~~~~ik~ayr~l~~~~hpD~~~~ 37 (371)
T PRK14292 2 MDYYELLGVSRTA--SADEIKSAYRKLALKYHPDRNKE 37 (371)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 5899999999999 99999999999999999999975
No 62
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.24 E-value=9e-07 Score=93.75 Aligned_cols=62 Identities=26% Similarity=0.389 Sum_probs=52.1
Q ss_pred cccCCCccccccccCcCCCCC-C-CHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcc
Q 025513 182 EQCTVGSSSDRTILGLPPSGP-L-KLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCA 248 (251)
Q Consensus 182 ~~~~~~~~d~YeVLGL~~~a~-~-s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsD 248 (251)
.+..|...++|+||.|+-+-- . +.+.||++|++||.+|||||||. ..++|..|++||+.|+.
T Consensus 1274 KP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1274 KPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred CCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHH
Confidence 455667789999999987632 2 44889999999999999999986 47999999999999983
No 63
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=1.4e-06 Score=81.26 Aligned_cols=66 Identities=23% Similarity=0.240 Sum_probs=54.5
Q ss_pred CCCccccccccCcCCCCC-CCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhcccC
Q 025513 185 TVGSSSDRTILGLPPSGP-LKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 185 ~~~~~d~YeVLGL~~~a~-~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 250 (251)
.....|+|.+|||+.... ++..+|.+|.++.+.+||||+..........+.|++|+.||++|+|+.
T Consensus 39 ~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~ 105 (379)
T COG5269 39 NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRK 105 (379)
T ss_pred hhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHH
Confidence 344578999999998754 588899999999999999999743323467899999999999999974
No 64
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.08 E-value=5.9e-06 Score=85.50 Aligned_cols=37 Identities=30% Similarity=0.559 Sum_probs=34.9
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS 227 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~ 227 (251)
.+||+||||++++ +.++||+|||+|+++||||++++.
T Consensus 2 ~DYYeVLGVs~dA--S~eEIKKAYRKLAKKyHPDKn~~~ 38 (871)
T TIGR03835 2 RDYYEVLGIDRDA--DEQEIKKAFRKLAKKYHPDRNKAP 38 (871)
T ss_pred CChhHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCh
Confidence 5899999999999 999999999999999999998763
No 65
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=3.5e-05 Score=70.80 Aligned_cols=54 Identities=26% Similarity=0.332 Sum_probs=48.4
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHH-Hhc
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYK-SLC 247 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYe-vLs 247 (251)
..+|.||||..++ +.++|+.||..|++.+|||..... ...+.|.+|.+||. ||.
T Consensus 47 ~e~fril~v~e~~--~adevr~af~~lakq~hpdsgs~~---adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 47 MECFRILGVEEGA--DADEVREAFHDLAKQVHPDSGSEE---ADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHhcccccC--chhHHHHHHHHHHHHcCCCCCCcc---ccHHHHHHHHHHHHHHHH
Confidence 4689999999999 999999999999999999987654 56789999999998 665
No 66
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=5.2e-05 Score=61.79 Aligned_cols=57 Identities=26% Similarity=0.251 Sum_probs=49.1
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhccc
Q 025513 185 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 249 (251)
Q Consensus 185 ~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp 249 (251)
.|....+-.||||.++. +.+.||.|+|++.+..|||+.+.+ -.-.+||+|+++|...
T Consensus 52 kMsr~EA~lIL~v~~s~--~k~KikeaHrriM~~NHPD~GGSP------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 52 KMSRREAALILGVTPSL--DKDKIKEAHRRIMLANHPDRGGSP------YLASKINEAKDLLEGT 108 (112)
T ss_pred ccchHHHHHHhCCCccc--cHHHHHHHHHHHHHcCCCcCCCCH------HHHHHHHHHHHHHhcc
Confidence 34556788999999999 999999999999999999998765 5566899999999643
No 67
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.90 E-value=0.00062 Score=58.51 Aligned_cols=56 Identities=25% Similarity=0.379 Sum_probs=49.7
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHHHHHHHHHh
Q 025513 189 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-----QAMAEEKFKLCLNAYKSL 246 (251)
Q Consensus 189 ~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-----k~~AeekFq~I~eAYevL 246 (251)
.++|.+||+.... +..+|+++|+++....|||+-.... ...+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~--~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKA--DQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhh--hHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999 9999999999999999999964321 567999999999999875
No 68
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.69 E-value=0.0022 Score=63.20 Aligned_cols=45 Identities=31% Similarity=0.429 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHHHHHHHHHhc
Q 025513 203 LKLDDVKNAFRLSALKWHPDKHQGSS-----QAMAEEKFKLCLNAYKSLC 247 (251)
Q Consensus 203 ~s~~eIKkAYRkLalk~HPDK~~~~~-----k~~AeekFq~I~eAYevLs 247 (251)
++.++||+|||+-+|..||||.+... +=+|++.|-.|++||+.-.
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred cCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 48999999999999999999987542 4558888888999988654
No 69
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.50 E-value=0.0026 Score=55.23 Aligned_cols=65 Identities=26% Similarity=0.235 Sum_probs=54.3
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccCC
Q 025513 187 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 187 ~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 251 (251)
...+||.++|.....++.++-+..-|-...++.|||+..... ...|.+.-.+|++||.+|.||++
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~ 73 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLA 73 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHH
Confidence 346899999999988888888888999999999999954321 23688999999999999999863
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.59 E-value=0.005 Score=52.93 Aligned_cols=61 Identities=28% Similarity=0.378 Sum_probs=50.8
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHHHHhcccC
Q 025513 190 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 250 (251)
Q Consensus 190 d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 250 (251)
+++.++|+++......+.++..|+.+.+.+|||+....+ +..+.+.+..++.||.+|.+|.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l 65 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPL 65 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHH
Confidence 456677888877778888999999999999999987654 4447789999999999999875
No 71
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=90.93 E-value=0.27 Score=41.09 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=37.1
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHHHHhc
Q 025513 185 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 247 (251)
Q Consensus 185 ~~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLs 247 (251)
.|....+..||||++.. +.++|.+.|..|-...+|++.+. .-.=.+|..|.+.|.
T Consensus 54 ~Mtl~EA~~ILnv~~~~--~~eeI~k~y~~Lf~~Nd~~kGGS------fYLQSKV~rAKErl~ 108 (127)
T PF03656_consen 54 GMTLDEARQILNVKEEL--SREEIQKRYKHLFKANDPSKGGS------FYLQSKVFRAKERLE 108 (127)
T ss_dssp ---HHHHHHHHT--G----SHHHHHHHHHHHHHHT-CCCTS-------HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCcc--CHHHHHHHHHHHHhccCCCcCCC------HHHHHHHHHHHHHHH
Confidence 46667899999999977 99999999999999999997654 233345666666664
No 72
>PF13446 RPT: A repeated domain in UCH-protein
Probab=86.19 E-value=1.3 Score=31.64 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=26.5
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHH
Q 025513 186 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSAL 217 (251)
Q Consensus 186 ~~~~d~YeVLGL~~~a~~s~~eIKkAYRkLal 217 (251)
|+...+|++|||+++. +.+.|-.+|.....
T Consensus 2 ~~~~~Ay~~Lgi~~~~--~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDT--DDDFIISAFQSKVN 31 (62)
T ss_pred CCHHHHHHHhCcCCCC--CHHHHHHHHHHHHH
Confidence 3446799999999998 99999999998887
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=84.66 E-value=2.4 Score=34.54 Aligned_cols=47 Identities=28% Similarity=0.304 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCc--hHHHHHHHHHHHHHHHHhccc
Q 025513 203 LKLDDVKNAFRLSALKWHPDKHQGSS--QAMAEEKFKLCLNAYKSLCAA 249 (251)
Q Consensus 203 ~s~~eIKkAYRkLalk~HPDK~~~~~--k~~AeekFq~I~eAYevLsDp 249 (251)
++..+++.|.|..-++.|||.....+ ++..++-++.|+.-.+.|..+
T Consensus 6 ~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 6 LSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 36788999999999999999876543 566788888888888877653
No 74
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=84.42 E-value=0.83 Score=38.97 Aligned_cols=23 Identities=26% Similarity=0.200 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHHHHHHhcccCC
Q 025513 229 QAMAEEKFKLCLNAYKSLCAALS 251 (251)
Q Consensus 229 k~~AeekFq~I~eAYevLsDp~k 251 (251)
+..+.+.+..|++||++|+||.+
T Consensus 32 ~~~a~~~s~~iN~AY~~L~~p~~ 54 (157)
T TIGR00714 32 QLAAVQQSTTLNQAYQTLKDPLM 54 (157)
T ss_pred hHHHHHHHHHHHHHHHHhCChhh
Confidence 35688999999999999999963
No 75
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=32.37 E-value=27 Score=18.46 Aligned_cols=13 Identities=46% Similarity=0.685 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHhc
Q 025513 235 KFKLCLNAYKSLC 247 (251)
Q Consensus 235 kFq~I~eAYevLs 247 (251)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4677888888774
Done!