Query 025514
Match_columns 251
No_of_seqs 147 out of 1273
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:52:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025514.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025514hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3md7_A Beta-lactamase-like; ss 100.0 1.1E-32 3.8E-37 241.6 21.2 194 45-250 63-292 (293)
2 3zwf_A Zinc phosphodiesterase 100.0 1.4E-31 4.8E-36 242.1 17.9 209 25-251 4-359 (368)
3 2cbn_A Ribonuclease Z; phospho 100.0 5.7E-31 2E-35 231.0 19.7 206 25-249 5-306 (306)
4 3jxp_A Coenzyme PQQ synthesis 100.0 9.8E-31 3.4E-35 232.5 17.4 192 41-249 37-305 (321)
5 1y44_A Ribonuclease Z; zinc-de 100.0 6.7E-30 2.3E-34 225.8 20.3 207 25-250 4-305 (320)
6 3g1p_A Protein PHNP; C-P lyase 100.0 7.7E-30 2.6E-34 219.4 11.0 180 45-249 39-251 (258)
7 1zkp_A Hypothetical protein BA 100.0 3.9E-27 1.3E-31 203.1 21.5 201 24-248 27-267 (268)
8 2e7y_A TRNAse Z; tRNA maturati 99.9 3.1E-25 1.1E-29 191.6 14.5 188 48-249 15-280 (280)
9 3kl7_A Putative metal-dependen 99.8 1.1E-17 3.8E-22 141.9 16.9 151 46-229 38-224 (235)
10 2wyl_A L-ascorbate-6-phosphate 99.7 3.3E-16 1.1E-20 140.7 21.3 156 80-250 137-324 (360)
11 3rpc_A Possible metal-dependen 99.7 8.8E-17 3E-21 138.4 16.5 151 79-249 87-264 (264)
12 3bv6_A Metal-dependent hydrola 99.7 2.1E-16 7.2E-21 143.0 19.6 155 80-249 161-348 (379)
13 2az4_A Hypothetical protein EF 99.7 3.9E-16 1.3E-20 143.1 19.1 141 81-226 107-271 (429)
14 2p4z_A Metal-dependent hydrola 99.7 5.3E-18 1.8E-22 147.7 3.3 186 45-249 33-284 (284)
15 3bk2_A RNAse J, metal dependen 99.6 1E-14 3.5E-19 138.3 18.0 172 25-218 20-251 (562)
16 1vjn_A Zn-dependent hydrolase 99.6 1.4E-14 4.8E-19 121.6 15.6 90 124-218 79-178 (220)
17 3iek_A Ribonuclease TTHA0252; 99.5 4E-13 1.4E-17 123.5 15.1 187 25-229 4-237 (431)
18 3zq4_A Ribonuclease J 1, RNAse 99.5 1.7E-12 5.9E-17 122.8 18.3 157 46-218 23-235 (555)
19 4b87_A DNA cross-LINK repair 1 99.4 2.6E-11 8.9E-16 109.2 17.0 146 25-199 12-183 (367)
20 2i7x_A Protein CFT2; polyadeny 99.3 2.2E-11 7.4E-16 118.3 11.5 140 46-187 16-220 (717)
21 3af5_A Putative uncharacterize 99.3 9.9E-11 3.4E-15 112.7 16.0 204 25-247 192-463 (651)
22 2i7t_A Cleavage and polyadenyl 99.2 7.8E-11 2.7E-15 108.8 13.8 147 25-186 15-210 (459)
23 2ycb_A Beta-CAsp RNAse, cleava 99.2 6.4E-11 2.2E-15 113.8 11.6 160 46-213 194-416 (636)
24 2xr1_A Cleavage and polyadenyl 99.1 9.8E-10 3.3E-14 105.6 15.9 204 25-247 187-452 (640)
25 3zdk_A 5' exonuclease apollo; 99.1 8.6E-10 2.9E-14 98.1 14.2 135 64-215 37-184 (336)
26 3adr_A Putative uncharacterize 98.7 6.6E-08 2.2E-12 81.8 10.5 154 45-218 20-212 (261)
27 3l6n_A Metallo-beta-lactamase; 98.3 6.8E-06 2.3E-10 67.5 10.8 95 45-162 31-161 (219)
28 1ycg_A Nitric oxide reductase; 98.3 9.7E-06 3.3E-10 72.6 12.6 97 45-161 36-168 (398)
29 2r2d_A AGR_PTI_140P, Zn-depend 98.2 2.8E-06 9.5E-11 72.3 8.1 123 80-214 124-260 (276)
30 2bib_A CBPE, teichoic acid pho 98.2 1.6E-05 5.6E-10 74.6 13.5 99 124-229 152-272 (547)
31 1e5d_A Rubredoxin\:oxygen oxid 98.2 5.7E-06 1.9E-10 74.3 9.9 97 45-161 35-167 (402)
32 3m8t_A 'BLR6230 protein; subcl 98.2 1E-05 3.5E-10 69.3 10.2 107 46-161 56-204 (294)
33 4ax1_B Metallo-beta-lactamase 98.2 4.1E-05 1.4E-09 65.6 14.1 153 45-217 58-254 (303)
34 2ohh_A Type A flavoprotein FPR 98.1 4.1E-05 1.4E-09 68.7 13.2 99 45-161 35-172 (404)
35 1k07_A FEZ-1 beta-lactamase; m 98.1 1.9E-05 6.6E-10 66.8 10.2 108 46-162 26-177 (263)
36 2xf4_A Hydroxyacylglutathione 98.0 5.9E-06 2E-10 67.4 6.2 108 46-162 14-154 (210)
37 3dha_A N-acyl homoserine lacto 98.0 1.5E-05 5.2E-10 66.9 8.8 74 81-164 122-200 (254)
38 1sml_A Protein (penicillinase) 97.9 9.6E-05 3.3E-09 62.6 10.5 107 45-162 38-187 (269)
39 4hl2_A Beta-lactamase NDM-1; s 97.8 1.3E-05 4.6E-10 66.9 4.4 103 44-162 47-184 (243)
40 3hnn_A Putative diflavin flavo 97.8 9.4E-05 3.2E-09 62.7 9.1 95 46-160 44-175 (262)
41 1m2x_A Class B carbapenemase B 97.8 0.00016 5.5E-09 59.4 10.2 95 45-162 27-157 (223)
42 4ad9_A Lactb2, beta-lactamase- 97.7 9.3E-05 3.2E-09 63.4 8.2 101 44-161 31-167 (289)
43 1a7t_A Metallo-beta-lactamase; 97.7 0.00015 5E-09 60.1 8.7 136 45-217 37-210 (232)
44 2zwr_A Metallo-beta-lactamase 97.6 0.00021 7.1E-09 58.1 8.7 103 45-162 13-147 (207)
45 4efz_A Metallo-beta-lactamase 97.6 0.0003 1E-08 60.8 10.1 105 46-163 18-178 (298)
46 3aj3_A MLR6805 protein, 4-pyri 97.6 0.00016 5.4E-09 61.3 7.5 86 117-215 163-254 (274)
47 1mqo_A Beta-lactamase II; alph 97.5 0.00022 7.4E-09 58.8 7.8 95 45-162 41-171 (227)
48 1xm8_A Glyoxalase II; structur 97.5 0.00017 5.7E-09 61.1 7.0 90 46-162 13-134 (254)
49 1ztc_A Hypothetical protein TM 97.5 5.1E-05 1.7E-09 62.7 3.6 126 24-164 15-179 (221)
50 2vw8_A PA1000, PQSE; quinolone 97.5 0.00062 2.1E-08 58.6 10.6 108 46-161 25-182 (303)
51 2q9u_A A-type flavoprotein; fl 97.5 0.00047 1.6E-08 62.0 9.5 97 45-161 41-173 (414)
52 2zo4_A Metallo-beta-lactamase 97.4 0.0002 6.9E-09 61.9 6.0 110 44-162 21-193 (317)
53 3tp9_A Beta-lactamase and rhod 97.4 0.00017 5.8E-09 66.4 5.4 96 45-161 16-151 (474)
54 3q6v_A Beta-lactamase; metallo 97.3 0.0013 4.4E-08 54.0 10.1 151 46-223 27-221 (233)
55 4dik_A Flavoprotein; TM0755, e 97.3 0.001 3.6E-08 60.3 9.9 97 45-161 52-182 (410)
56 1jjt_A IMP-1 metallo beta-lact 97.3 0.0005 1.7E-08 56.7 6.8 134 44-217 32-201 (228)
57 2gcu_A Putative hydroxyacylglu 97.3 0.00077 2.6E-08 56.6 7.8 90 45-163 15-146 (245)
58 2qed_A Hydroxyacylglutathione 97.2 0.001 3.5E-08 56.3 8.2 89 46-162 20-137 (258)
59 3r2u_A Metallo-beta-lactamase 97.2 0.00033 1.1E-08 64.5 5.2 96 45-162 37-172 (466)
60 1qh5_A Glyoxalase II, protein 97.2 0.0012 4.2E-08 56.0 8.2 88 46-162 13-137 (260)
61 2fhx_A SPM-1; metallo-beta-lac 97.1 0.00079 2.7E-08 55.9 6.7 144 46-216 31-224 (246)
62 2y8b_A Metallo-B-lactamase; hy 97.1 0.0011 3.8E-08 56.1 7.1 100 44-163 67-201 (265)
63 3h3e_A Uncharacterized protein 96.7 0.00062 2.1E-08 58.3 2.6 51 193-250 216-266 (267)
64 2p18_A Glyoxalase II; metallop 96.7 0.007 2.4E-07 52.6 9.0 40 122-163 136-184 (311)
65 3iog_A Beta-lactamase; hydrola 96.6 0.013 4.4E-07 47.6 9.8 145 45-217 23-208 (227)
66 3esh_A Protein similar to meta 96.6 0.0018 6.2E-08 55.0 4.5 111 44-163 47-210 (280)
67 2p97_A Hypothetical protein; p 96.5 0.0021 7.1E-08 52.0 4.5 92 45-163 24-141 (201)
68 4eyb_A Beta-lactamase NDM-1; m 96.1 0.0036 1.2E-07 53.1 3.7 102 46-162 76-211 (270)
69 2cfu_A SDSA1; SDS-hydrolase, l 95.7 0.022 7.4E-07 54.7 7.7 38 123-162 261-302 (658)
70 1p9e_A Methyl parathion hydrol 95.6 0.011 3.7E-07 51.7 4.9 68 133-215 226-304 (331)
71 2yhe_A SEC-alkyl sulfatase; hy 92.1 0.018 6.1E-07 55.4 0.0 37 123-161 272-312 (668)
72 2i7t_A Cleavage and polyadenyl 79.4 1.8 6E-05 39.2 4.5 63 188-251 393-458 (459)
73 2ycb_A Beta-CAsp RNAse, cleava 75.7 2.3 7.7E-05 40.4 4.2 58 188-249 576-635 (636)
74 3af5_A Putative uncharacterize 75.1 2.5 8.5E-05 40.2 4.3 58 188-249 591-650 (651)
75 2xr1_A Cleavage and polyadenyl 75.0 2.9 9.8E-05 39.7 4.7 58 188-249 580-639 (640)
76 3bk2_A RNAse J, metal dependen 72.9 3.4 0.00012 38.5 4.6 59 187-250 379-440 (562)
77 3zq4_A Ribonuclease J 1, RNAse 68.1 5.3 0.00018 37.2 4.8 59 187-250 364-425 (555)
78 2az4_A Hypothetical protein EF 65.7 5.1 0.00017 35.6 4.0 51 188-249 379-429 (429)
79 3h3e_A Uncharacterized protein 55.5 2.2 7.4E-05 36.0 -0.3 36 189-225 180-219 (267)
80 1qys_A TOP7; alpha-beta, novel 52.9 34 0.0012 23.0 5.3 56 194-249 33-90 (106)
81 3hh1_A Tetrapyrrole methylase 39.8 17 0.00059 26.0 2.5 26 158-183 16-41 (117)
82 4b87_A DNA cross-LINK repair 1 39.2 27 0.00093 30.5 4.2 42 189-230 319-361 (367)
83 3dqp_A Oxidoreductase YLBE; al 37.7 60 0.0021 25.1 5.7 59 155-213 45-105 (219)
84 3iek_A Ribonuclease TTHA0252; 34.9 37 0.0013 30.1 4.4 55 188-249 377-431 (431)
85 3e48_A Putative nucleoside-dip 34.4 18 0.00062 29.6 2.1 59 155-214 48-106 (289)
86 3e8x_A Putative NAD-dependent 34.1 95 0.0033 24.2 6.5 57 154-213 68-130 (236)
87 3sft_A CHEB, chemotaxis respon 30.6 47 0.0016 26.4 3.9 40 205-248 34-73 (193)
88 2hl0_A Threonyl-tRNA synthetas 30.2 1.5E+02 0.005 22.4 6.3 26 193-218 60-88 (143)
89 3r6d_A NAD-dependent epimerase 29.2 55 0.0019 25.4 4.2 53 154-213 55-107 (221)
90 1chd_A CHEB methylesterase; ch 26.4 85 0.0029 25.0 4.7 50 195-248 23-75 (203)
91 3qvo_A NMRA family protein; st 25.6 58 0.002 25.7 3.7 56 154-214 70-125 (236)
92 3m2p_A UDP-N-acetylglucosamine 24.4 1.4E+02 0.0047 24.4 6.0 58 154-213 45-108 (311)
93 2zcu_A Uncharacterized oxidore 23.6 1E+02 0.0036 24.6 5.0 57 155-214 48-104 (286)
94 3rft_A Uronate dehydrogenase; 23.6 80 0.0028 25.4 4.3 59 153-212 45-109 (267)
95 3dhn_A NAD-dependent epimerase 23.1 54 0.0018 25.5 3.0 58 155-213 50-111 (227)
96 1qyd_A Pinoresinol-lariciresin 22.7 1.6E+02 0.0056 23.8 6.1 56 155-212 59-115 (313)
97 3zdk_A 5' exonuclease apollo; 21.0 53 0.0018 28.2 2.7 29 188-216 274-302 (336)
98 1hdo_A Biliverdin IX beta redu 20.6 1.7E+02 0.006 21.7 5.5 58 155-213 50-110 (206)
99 3b9q_A Chloroplast SRP recepto 20.3 1.7E+02 0.0058 24.5 5.7 65 172-246 218-284 (302)
No 1
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=100.00 E-value=1.1e-32 Score=241.62 Aligned_cols=194 Identities=30% Similarity=0.509 Sum_probs=160.7
Q ss_pred hheeeeee--cC---cEEEEecCC-------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHH
Q 025514 45 ILQACLQS--SF---STIALFVGF-------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVM 94 (251)
Q Consensus 45 ~~~~ll~~--~~---~~iLiD~G~-------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l 94 (251)
..|++|+. ++ ..+|||||+ |+.|++.|+.+...+..+++||+++++.+.+
T Consensus 63 ~~s~li~~~~~~g~~~~iLID~G~~~~~~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l 142 (293)
T 3md7_A 63 RASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRL 142 (293)
T ss_dssp BCEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHH
T ss_pred ccEEEEEecCCCCceeEEEEECCccHHHHHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHH
Confidence 34599985 44 699999997 8999999886533456789999999999999
Q ss_pred HHhCCeeeecCCCCCC-CcccceeEEEec-CceeEeCC----EEEEEEEeccCCCcceEEEEEceEEEeCCCCCCCcchh
Q 025514 95 KKTHYYLVDTSGIIPG-AAVSELQFNIID-EEPFTVQD----LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETY 168 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~g-~~~~~~~~~~i~-~~~~~~~~----~~I~~~~v~H~~~~~s~gy~i~~i~Ys~Dt~~~~e~~~ 168 (251)
++.+++.+..+ .+ .+.+.++++.++ ++++++++ ++|++++++|+. .+++||+|++++|+|||++++++++
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~-~~~~g~~i~~~~y~gDt~~~~~~~~ 218 (293)
T 3md7_A 143 YDTFGYCFETP---VGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGD-IESLGFRIGSVVYCTDVSAFPEQSL 218 (293)
T ss_dssp HHHCGGGTSCC---TTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETT-EEEEEEEETTEEEECSCSBCCGGGH
T ss_pred HHhhhhhhccc---cccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCC-CCEEEEEEeEEEEECCCCCCCHHHH
Confidence 88776654321 11 122346777776 47899999 999999999984 3999999999999999997778999
Q ss_pred hhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEe
Q 025514 169 PFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVP 248 (251)
Q Consensus 169 ~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~ 248 (251)
++++++|+||+||++.. .+++|+++++++++++++++|++++||+++++++++++++++ .++++|+|||+|+
T Consensus 219 ~~~~~~Dlli~e~~~~~-~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~~~-------~~v~~a~DG~~i~ 290 (293)
T 3md7_A 219 QYIKDADVLIIGALQYR-PHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETP-------HHVEPGYDGLRFE 290 (293)
T ss_dssp HHHTTCSEEEEECCCSS-CBTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHHHHHHSC-------TTEEECCTTCEEE
T ss_pred HHhcCCCEEEEeCccCC-CCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHhhcC-------CCcEEeeCCcEEE
Confidence 99999999999998764 578999999999999999999999999999998776654443 3899999999998
Q ss_pred cc
Q 025514 249 VM 250 (251)
Q Consensus 249 l~ 250 (251)
|.
T Consensus 291 l~ 292 (293)
T 3md7_A 291 VA 292 (293)
T ss_dssp EC
T ss_pred ec
Confidence 85
No 2
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.98 E-value=1.4e-31 Score=242.06 Aligned_cols=209 Identities=15% Similarity=0.112 Sum_probs=152.6
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC---------------------------CCCCChhhHhhh--
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF---------------------------LPMGLDDLRDWT-- 75 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~---------------------------Hi~GL~~l~~~~-- 75 (251)
++|||+++.++.. |+.++ ++|+.++..+|||||+ |+.||+.|+...
T Consensus 4 ~~LGtg~~~p~~~-r~~ss----~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~ 78 (368)
T 3zwf_A 4 TFLGTGAAYPSPT-RGASA----VVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISL 78 (368)
T ss_dssp EEEECBSSSCCSS-SCSSE----EEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHH
T ss_pred EEECCCCCCCCCC-CCccE----EEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhh
Confidence 5899998877654 66665 8999999999999997 999999887431
Q ss_pred cc----CCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec----------------------------C
Q 025514 76 NN----VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID----------------------------E 123 (251)
Q Consensus 76 ~~----~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~----------------------------~ 123 (251)
.. +.++++||||+++.+.++..+..... . . ...+.++++. +
T Consensus 79 ~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~-~---~---~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (368)
T 3zwf_A 79 QSGSMVSKQPIEIYGPVGLRDFIWRTMELSHT-E---L---VFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQG 151 (368)
T ss_dssp HC------CCEEEEEETTHHHHHHHHHHHTTC-C---C---SSCEEEEEECCCGGGSCC-------------------CC
T ss_pred ccccccCCCCeEEEEcHHHHHHHHHHHHhhCc-C---C---CceEEEEEeecCccccccccccccccccccccCcccccc
Confidence 11 23589999999999888763211100 0 0 0012233321 1
Q ss_pred ------------ceeEeCCEEEEEEEeccCCCcceEEEEEc---------------------------------------
Q 025514 124 ------------EPFTVQDLKITPLPVWHGAGYRSLGFRFG--------------------------------------- 152 (251)
Q Consensus 124 ------------~~~~~~~~~I~~~~v~H~~~~~s~gy~i~--------------------------------------- 152 (251)
..++.++++|+++++.|+. +|+||+|+
T Consensus 152 ~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~v--p~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~ 229 (368)
T 3zwf_A 152 RTILLDSEENSYLLFDDEQFVVKAFRLFHRI--PSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGV 229 (368)
T ss_dssp CEECCBTTTTBEEEEECSSEEEEEEEEESSS--CEEEEEEEECC------------------------------------
T ss_pred cccccccccCceeEEeCCCEEEEEEeccCCC--ceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCE
Confidence 1344589999999999998 99999994
Q ss_pred ---------------eEEEeCCCCC--CCcchhhhhCCCcEEEEcccCCCC-----CCCCCCCHHHHHHHHHhcCCCeEE
Q 025514 153 ---------------NICYISDVSE--IPEETYPFLQDCEILIMDALRPDR-----SSSTHFGLPRALEEVRKIQPKRTL 210 (251)
Q Consensus 153 ---------------~i~Ys~Dt~~--~~e~~~~~~~~~DlLi~E~~~~~~-----~~~~H~t~~ea~~~a~~~~~k~lv 210 (251)
+++|+|||++ + +++.++++++|+||+||+|.+. ..++|||++||+++|+++++|+++
T Consensus 230 ~i~~~~v~~~~~~g~~v~~~GDT~~~~~-~~~~~~~~~~Dlli~Eat~~~~~~~~a~~~~H~t~~~A~~~a~~~~~k~li 308 (368)
T 3zwf_A 230 TISPQDVLKKPIVGRKICILGDCSGVVG-DGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATFAKLCRAKRLV 308 (368)
T ss_dssp ------------CCCEEEEECSCSEECS-SHHHHHTTTCSEEEEECCSCGGGHHHHHHTTCCCHHHHHHHHHHTTCSEEE
T ss_pred EEEhHHhccccccceEEEEEecCCcccc-hhHHHHhcCCCEEEEecCCChHHHhhhhcCCCCCHHHHHHHHHHcCCCEEE
Confidence 4899999997 5 4799999999999999999874 248999999999999999999999
Q ss_pred EEccCCCCCh------------HHHHHHHHhhhhcCC-CcEEEeecCeEEeccC
Q 025514 211 FIGMMHLMDH------------EKVNEELLKLMETEG-LDVQLSYDGLRVPVML 251 (251)
Q Consensus 211 ltH~s~~~~~------------~~l~~~l~~~~~~~~-~~v~~A~DG~~i~l~~ 251 (251)
+||++++++. +++.+++++. +. .++.+|+|||+|+|.+
T Consensus 309 l~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~---f~~~~~~~a~dg~~~~i~~ 359 (368)
T 3zwf_A 309 LTHFSQRYKPVALAREGETDGIAELKKQAESV---LDLQEVTLAEDFMVISIPI 359 (368)
T ss_dssp EECBCCCC------------------------------CEEEECCTTCEEECCC
T ss_pred EEeeCcccCccccccccccchHHHHHHHHHHh---cCCCceEEecCCcEEEeec
Confidence 9999999862 2344444442 22 2799999999999853
No 3
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.97 E-value=5.7e-31 Score=230.98 Aligned_cols=206 Identities=15% Similarity=0.067 Sum_probs=161.9
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeee----cCcEEEEecCC---------------------------CCCCChhhHh
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQS----SFSTIALFVGF---------------------------LPMGLDDLRD 73 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~----~~~~iLiD~G~---------------------------Hi~GL~~l~~ 73 (251)
++|||+++.++.. |+..+ ++|+. ++..+|||||. |+.|++.++.
T Consensus 5 ~~LGtg~~~p~~~-r~~~~----~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~ 79 (306)
T 2cbn_A 5 IFLGTSAGVPTRT-RNVTA----ILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLC 79 (306)
T ss_dssp EEEECBSSSCCSS-CCBCE----EEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHH
T ss_pred EEEEcCCCCCCCC-CCCCE----EEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHH
Confidence 5899998876553 65554 99998 88999999996 8889988864
Q ss_pred hh--ccCCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEecC-ceeEeCCEEEEEEEeccCCCcceEEEE
Q 025514 74 WT--NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDE-EPFTVQDLKITPLPVWHGAGYRSLGFR 150 (251)
Q Consensus 74 ~~--~~~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~-~~~~~~~~~I~~~~v~H~~~~~s~gy~ 150 (251)
.. ..+..+++||+|+++.+.++..+..... . .. ..+++++++. +.+++++++|+++++.|+. +++||+
T Consensus 80 ~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~---~~---~~~~~~~~~~g~~~~~~~~~v~~~~~~H~~--~~~gy~ 150 (306)
T 2cbn_A 80 SRSMSGIIQPLTIYGPQGIREFVETALRISGS-W---TD---YPLEIVEIGAGEILDDGLRKVTAYPLEHPL--ECYGYR 150 (306)
T ss_dssp HHHHTTCCSCEEEEESTTHHHHHHHHHHHTTC-C---CS---SCEEEEECCSEEEEECSSEEEEEEECBSSS--CCEEEE
T ss_pred HHHhcCCCCCeEEEcCccHHHHHHHHHHhhcc-C---CC---ceEEEEEcCCCcEeecCCEEEEEEEccCCC--CccEEE
Confidence 21 2345689999999998888764321110 0 11 1245667764 7889999999999999998 999999
Q ss_pred Ec------------------------------------------------------eEEEeCCCCCCCcchhhhhCCCcE
Q 025514 151 FG------------------------------------------------------NICYISDVSEIPEETYPFLQDCEI 176 (251)
Q Consensus 151 i~------------------------------------------------------~i~Ys~Dt~~~~e~~~~~~~~~Dl 176 (251)
|+ +|+|+|||++.+ +++++++++|+
T Consensus 151 i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~-~~~~~~~~~D~ 229 (306)
T 2cbn_A 151 IEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCD-AALDLAKGVDV 229 (306)
T ss_dssp EEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCS-THHHHHTTCSE
T ss_pred EEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHH-HHHHHhcCCCE
Confidence 84 599999999975 78999999999
Q ss_pred EEEcccCCCC-----CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHH---HHHHHHhhhhcCCCcEEEeecCeEEe
Q 025514 177 LIMDALRPDR-----SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEK---VNEELLKLMETEGLDVQLSYDGLRVP 248 (251)
Q Consensus 177 Li~E~~~~~~-----~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~---l~~~l~~~~~~~~~~v~~A~DG~~i~ 248 (251)
||+||++.++ ..++|++++||+++++++++|++++||++++++..+ +.+++++. + .++.+|+|||+|+
T Consensus 230 li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~---~-~~~~~a~Dg~~~~ 305 (306)
T 2cbn_A 230 MVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSI---F-PATELANDFTVFN 305 (306)
T ss_dssp EEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTT---C-SCEEECCTTCEEE
T ss_pred EEEECcCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHh---C-CCcEEcccccEee
Confidence 9999999864 358999999999999999999999999999996543 34444432 2 4799999999997
Q ss_pred c
Q 025514 249 V 249 (251)
Q Consensus 249 l 249 (251)
|
T Consensus 306 ~ 306 (306)
T 2cbn_A 306 V 306 (306)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.97 E-value=9.8e-31 Score=232.45 Aligned_cols=192 Identities=18% Similarity=0.255 Sum_probs=148.9
Q ss_pred ChhhhheeeeeecCcE-EEEecCC----------------------------------CCCCChhhHhhhccCCCCccEE
Q 025514 41 PFKRILQACLQSSFST-IALFVGF----------------------------------LPMGLDDLRDWTNNVQRHIPIY 85 (251)
Q Consensus 41 ~~~~~~~~ll~~~~~~-iLiD~G~----------------------------------Hi~GL~~l~~~~~~~~~~l~iy 85 (251)
+.....|++|+.++.+ ||||||+ |+.||+.|+ ...+++||
T Consensus 37 ~~R~~ss~li~~~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~-----~~~~~~vy 111 (321)
T 3jxp_A 37 TARTQSSIALSDDGVHWILCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLR-----EGCPHQVW 111 (321)
T ss_dssp CCBCBCEEEEESSSSSEEEECCCTTHHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGG-----GGCCEEEE
T ss_pred CcccceEEEEEeCCceEEEEeCCchHHHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHH-----hcCCCeEE
Confidence 3444556999998876 9999997 555555553 24689999
Q ss_pred eCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEe---CCEEEEEEEec--------cCCC---cceEEEE
Q 025514 86 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTV---QDLKITPLPVW--------HGAG---YRSLGFR 150 (251)
Q Consensus 86 gp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~---~~~~I~~~~v~--------H~~~---~~s~gy~ 150 (251)
+++++.+.+++.++ .+.... +. .+.+++++++ ++++++ ++++|++++++ |+.. .+++||+
T Consensus 112 ~~~~~~~~l~~~~~-~f~~~~--~~--~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~ 186 (321)
T 3jxp_A 112 CTDMVHQDLTTGFP-LFNMLS--HW--NGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLM 186 (321)
T ss_dssp ECHHHHHHTTTTSC-HHHHHT--TT--TTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEE
T ss_pred ECHHHHHHHHhhCc-cccccc--cc--cCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEE
Confidence 99999998876543 222100 11 1236778876 478999 99999999998 6531 3899999
Q ss_pred Ec------eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCC-------------CCCCCCCHH---HHHHHHHhcCCCe
Q 025514 151 FG------NICYISDVSEIPEETYPFLQDCEILIMDALRPDR-------------SSSTHFGLP---RALEEVRKIQPKR 208 (251)
Q Consensus 151 i~------~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~-------------~~~~H~t~~---ea~~~a~~~~~k~ 208 (251)
|+ +++|+|||++++++++++++++|+||+||++... ..++|++++ ||+++++++++|+
T Consensus 187 i~~~~~g~~i~y~~Dt~~~~~~~~~~~~~~D~li~eat~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~ 266 (321)
T 3jxp_A 187 VEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQR 266 (321)
T ss_dssp EEETTTCCEEEEESSCCCCCHHHHHHHHHCSEEEEECCCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSE
T ss_pred EEecCCCcEEEEECCCCCCCHHHHHHhcCCCEEEEeCCCCCcHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCe
Confidence 97 7999999998888899999999999999987652 357999999 9999999999999
Q ss_pred EEEEccCCCCC-----hHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 209 TLFIGMMHLMD-----HEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 209 lvltH~s~~~~-----~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
++|||++++++ .++.++.++ .++++|||||+|++
T Consensus 267 lvLtH~s~~np~l~~~~~e~~~~~~-------~~v~~A~DGm~i~~ 305 (321)
T 3jxp_A 267 KVLIHINNTNPILDENSPERAEVLR-------RGVEVAFDGMSIEL 305 (321)
T ss_dssp EEEESBCTTCGGGSTTCHHHHHHHH-------TTEEECCTTCEEEE
T ss_pred EEEEEeCCCCcccccchHHHHHhhc-------CCcEEecCCcEEEe
Confidence 99999999874 124444333 38999999999987
No 5
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.97 E-value=6.7e-30 Score=225.81 Aligned_cols=207 Identities=15% Similarity=0.152 Sum_probs=162.6
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeee---cCcEEEEecCC---------------------------CCCCChhhHhh
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQS---SFSTIALFVGF---------------------------LPMGLDDLRDW 74 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~---~~~~iLiD~G~---------------------------Hi~GL~~l~~~ 74 (251)
++|||+++.++.. |+..+ ++|+. ++..+|||||. |+.|++.++..
T Consensus 4 ~~LGtg~~~p~~~-r~~~~----~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~ 78 (320)
T 1y44_A 4 LFLGTGAGIPAKA-RNVTS----VALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGS 78 (320)
T ss_dssp EEEECBSSSCCSS-CCBCE----EEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHH
T ss_pred EEEecCCCCCCcc-CCCCE----EEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHH
Confidence 5899998876553 55444 99998 88999999996 88899888752
Q ss_pred h--ccCCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEecC-ceeEeCCEEEEEEEeccCCCcceEEEEE
Q 025514 75 T--NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDE-EPFTVQDLKITPLPVWHGAGYRSLGFRF 151 (251)
Q Consensus 75 ~--~~~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~-~~~~~~~~~I~~~~v~H~~~~~s~gy~i 151 (251)
. ..+..+++||+|+++.+.++..+..... . .+ ..+++++++. +.+++++++|+++|+.|+. +++||++
T Consensus 79 ~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~-~---~~---~~~~~~~~~~g~~~~~~~~~v~~~p~~H~~--~~~gy~i 149 (320)
T 1y44_A 79 RSFQGGEDELTVYGPKGIKAFIETSLAVTKT-H---LT---YPLAIQEIEEGIVFEDDQFIVTAVSVIHGV--EAFGYRV 149 (320)
T ss_dssp HHHTTCCSCEEEEESTTHHHHHHHHHHHTTC-C---CS---SCEEEEECCSEEEEECSSEEEEEEECBSSS--SBEEEEE
T ss_pred HHhcCCCCCEEEEeCHHHHHHHHHHHHhhcc-C---CC---CceEEEEcCCCceEecCCEEEEEEEccCCC--CcceEEE
Confidence 1 2345689999999998888764221110 0 11 1245666654 7889999999999999998 8999988
Q ss_pred c------------------------------------------------------eEEEeCCCCCCCcchhhhhCCCcEE
Q 025514 152 G------------------------------------------------------NICYISDVSEIPEETYPFLQDCEIL 177 (251)
Q Consensus 152 ~------------------------------------------------------~i~Ys~Dt~~~~e~~~~~~~~~DlL 177 (251)
+ +++|+|||++.+ ++.++++++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~-~~~~~~~~~D~l 228 (320)
T 1y44_A 150 QEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSD-KLKELARDCDVM 228 (320)
T ss_dssp EECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBCCH-HHHHHTTTCSEE
T ss_pred ecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHH-HHHHHhCCCCEE
Confidence 4 599999999875 789999999999
Q ss_pred EEcccCCCC-----CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCCh---HHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 178 IMDALRPDR-----SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDH---EKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 178 i~E~~~~~~-----~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~---~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
|+||++.++ ..++||+++||+++++++++|++++||++++++. +++.+++++. + .++.+|+|||+|+|
T Consensus 229 i~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~---~-~~~~~a~dg~~~~l 304 (320)
T 1y44_A 229 VHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDV---F-PNSVAAYDFLEVNV 304 (320)
T ss_dssp EEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHH---C-SSEEECCTTCEEEC
T ss_pred EEeccCCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHh---C-CCcEeccCCCEEEe
Confidence 999999875 3589999999999999999999999999998854 3344555542 2 37999999999987
Q ss_pred c
Q 025514 250 M 250 (251)
Q Consensus 250 ~ 250 (251)
.
T Consensus 305 ~ 305 (320)
T 1y44_A 305 P 305 (320)
T ss_dssp C
T ss_pred c
Confidence 4
No 6
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.96 E-value=7.7e-30 Score=219.44 Aligned_cols=180 Identities=24% Similarity=0.455 Sum_probs=140.5
Q ss_pred hheeeeeecCcEEEEecCC-----------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHhCCee
Q 025514 45 ILQACLQSSFSTIALFVGF-----------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYL 101 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-----------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~~~~ 101 (251)
..|++|+.++..+|||||. |+.|++.++ + ..+.+++||+++++.. +.+.
T Consensus 39 ~s~~li~~~~~~iLiD~G~~~~~~~~~~~~id~IliTH~H~DHi~gl~~l~-~--~~~~~~~v~~~~~~~~-~~~~---- 110 (258)
T 3g1p_A 39 PCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR-W--GVGDPIPVYGPPDEQG-CDDL---- 110 (258)
T ss_dssp BSEEEEEETTEEEEECCCCTTHHHHCCTTSSCEEECSCCCHHHHGGGTTTT-T--CSSSCEEEEECCCSSC-STTT----
T ss_pred CceEEEEECCcEEEEECCchHHHhhcCcccCCEEEEccCchhHhCCHHHHh-c--cCCCCeEEEeChhhhh-HHHH----
Confidence 3459999999999999993 777776664 2 3456799999987651 1111
Q ss_pred eecCCCCCCCcccceeE-EEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc----eEEEeCCCCCCCcchhhhh--CC
Q 025514 102 VDTSGIIPGAAVSELQF-NIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYPFL--QD 173 (251)
Q Consensus 102 ~~~~~~~~g~~~~~~~~-~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~----~i~Ys~Dt~~~~e~~~~~~--~~ 173 (251)
+. .++ ..++ +.++ ++++++++++|++++++|+. +++||+|+ +++|+|||+++++++++.+ ++
T Consensus 111 ~~----~~~----~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~--~~~g~~i~~~~~~i~~~GDt~~~~~~~~~~l~~~~ 180 (258)
T 3g1p_A 111 FK----HPG----LLDFSHTVEPFVVFDLQGLQVTPLPLNHSK--LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQ 180 (258)
T ss_dssp TT----SCT----TEEEEEECCTTCCEEETTEEEEEEECCSSS--CCEEEEEECSSCEEEEECSCSSCCHHHHHHHHHTC
T ss_pred hc----CCC----ccccccccCCCCeEEECCEEEEEEECCCCC--CceEEEEEeCCcEEEEECCCCCCCHHHHHHHHhCC
Confidence 11 011 1222 3444 57899999999999999998 89999998 7999999999887678888 79
Q ss_pred CcEEEEcccCCCC--CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 174 CEILIMDALRPDR--SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 174 ~DlLi~E~~~~~~--~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
+|+||+|+++.++ ..++|+++++|+++++++++|+++++|++++++++.+++ ....++++|||||+|++
T Consensus 181 ~Dlli~e~t~~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~~~~~~~~~-------~~~~~v~~a~Dg~~~~~ 251 (258)
T 3g1p_A 181 PQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMEN-------ALPSGFEVGFDGMEIGV 251 (258)
T ss_dssp CSEEEEECCBSSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCHHHHHHHTTC-------CCCTTEEECCTTEEEC-
T ss_pred CCEEEEeCCCCCccccCCCCCCHHHHHHHHHHcCCCEEEEECccCccchhhhhh-------hCCCCeEEccCCCEEee
Confidence 9999999999865 468999999999999999999999999999886543321 23358999999999986
No 7
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.95 E-value=3.9e-27 Score=203.09 Aligned_cols=201 Identities=15% Similarity=0.100 Sum_probs=160.5
Q ss_pred ceeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC--------------------------CCCCChhhHhhh--
Q 025514 24 QISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF--------------------------LPMGLDDLRDWT-- 75 (251)
Q Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~--------------------------Hi~GL~~l~~~~-- 75 (251)
=++|||.++.+... |... |++|+.++..+|||||. |+.|++.+....
T Consensus 27 i~~LG~g~~~p~~~-~~~~----~~li~~~~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~ 101 (268)
T 1zkp_A 27 MTVVGFWGGFPEAG-EATS----GYLFEHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLI 101 (268)
T ss_dssp EEEEECBSSSCCTT-CCBS----EEEEEETTEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHH
T ss_pred EEEEeCCCCcCCCC-CCcc----EEEEEECCcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHh
Confidence 46789987765543 5444 49999999999999995 888888776431
Q ss_pred ----ccCCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEE
Q 025514 76 ----NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFR 150 (251)
Q Consensus 76 ----~~~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~ 150 (251)
..+.++++||+++++.+.+++.. +. + ....+.++ ++++++++++|++++++|+. +++||+
T Consensus 102 ~~~~~~~~~~~~i~~~~~~~~~l~~~~---~~------~----~~~~~~~~~g~~~~~g~~~v~~~~~~H~~--~~~~~~ 166 (268)
T 1zkp_A 102 TSATKGQLPELPIYGHTFDENGFHSLT---HE------P----HTKGIPYNPEETLQIGPFSISFLKTVHPV--TCFAMR 166 (268)
T ss_dssp HHHHHCCCCCEEEEECSSSHHHHHTTC---BT------T----TEEEEECCTTSCEEETTEEEEEEECCSSS--CCEEEE
T ss_pred cccccCCCCceEEEeCccHHHHHHhcc---cC------C----ccceEEecCCCeEEECCEEEEEEECCCCC--CceEEE
Confidence 11456799999999988776532 11 1 12344554 47899999999999999998 899999
Q ss_pred Ec----eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCC---CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHH
Q 025514 151 FG----NICYISDVSEIPEETYPFLQDCEILIMDALRPDR---SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKV 223 (251)
Q Consensus 151 i~----~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~---~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l 223 (251)
|+ +++|+||+.+.+ ++.++++++|+|++||++.+. ..++|+++++++++++++++|+++++|++++++.+++
T Consensus 167 i~~~~~~i~~~GD~~~~~-~~~~~~~~~d~li~e~~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~ 245 (268)
T 1zkp_A 167 ITAGNDIVVYSADSSYIP-EFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADL 245 (268)
T ss_dssp EEETTEEEEECCSCCCCT-THHHHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHH
T ss_pred EEECCeEEEEeCCCCCCH-HHHHHHcCCCEEEEECCCCccccccCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHH
Confidence 97 899999999865 799999999999999998754 2467999999999999999999999999999887777
Q ss_pred HHHHHhhhhcCCCcEEEeecCeEEe
Q 025514 224 NEELLKLMETEGLDVQLSYDGLRVP 248 (251)
Q Consensus 224 ~~~l~~~~~~~~~~v~~A~DG~~i~ 248 (251)
.+++++. ++.++.+|+|||+|+
T Consensus 246 ~~~~~~~---~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 246 VTEAKQI---FSGHITLAHSGYVWN 267 (268)
T ss_dssp HHHHHTT---CCSEEEECCTTCEEE
T ss_pred HHHHHHh---CCCCEEEEeCCcccc
Confidence 7667653 334799999999985
No 8
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.93 E-value=3.1e-25 Score=191.58 Aligned_cols=188 Identities=12% Similarity=0.140 Sum_probs=137.4
Q ss_pred eeeeecCcEEEEecCC------------------------CCCCChhhHhh----hccCCCCccEEeCHHHHHHHHHhCC
Q 025514 48 ACLQSSFSTIALFVGF------------------------LPMGLDDLRDW----TNNVQRHIPIYVAMRDFEVMKKTHY 99 (251)
Q Consensus 48 ~ll~~~~~~iLiD~G~------------------------Hi~GL~~l~~~----~~~~~~~l~iygp~~~~~~l~~~~~ 99 (251)
+++ ++..+|||||. |+.|++.|... ...+.++++||+|+++. .+++.+.
T Consensus 15 ~~i--~~~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~ 91 (280)
T 2e7y_A 15 IYY--SPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTE 91 (280)
T ss_dssp EEE--GGGTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHH
T ss_pred EEE--CCcEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHH
Confidence 555 57899999996 88899888521 11235689999999987 6665321
Q ss_pred eeeecCCCCCCCcccceeEEEec-CceeEeC-----CEEEEEEEeccCCCcc--eEEEEEc-------------------
Q 025514 100 YLVDTSGIIPGAAVSELQFNIID-EEPFTVQ-----DLKITPLPVWHGAGYR--SLGFRFG------------------- 152 (251)
Q Consensus 100 ~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~-----~~~I~~~~v~H~~~~~--s~gy~i~------------------- 152 (251)
...... +. ....+.++.++ +++++++ +++|+++++.|+. + ++||+|+
T Consensus 92 ~~~~~~---~~-~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~--~~~~~g~~i~~~~~~l~~~~~g~~~~~~~ 165 (280)
T 2e7y_A 92 FIKRAN---PD-LRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVS--SEVSFGYHIFEVRRKLKKEFQGLDSKEIS 165 (280)
T ss_dssp HHHHHC---GG-GTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCS--SSCCEEEEEEEEEEEECGGGTTCCHHHHH
T ss_pred HHhhcc---cC-CCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCC--CCceEEEEEEEcccccCHhhcCCCHHHHH
Confidence 110000 00 01124566665 4789998 8999999999997 7 9999984
Q ss_pred ------------------eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCC---CCCCCCHHHHHHHHHhcCCCeEEE
Q 025514 153 ------------------NICYISDVSEIPEETYPFLQDCEILIMDALRPDRS---SSTHFGLPRALEEVRKIQPKRTLF 211 (251)
Q Consensus 153 ------------------~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~---~~~H~t~~ea~~~a~~~~~k~lvl 211 (251)
+|+|+|||++. +.++++++|+||+||++.+.. .++|+++++|+++++++++|++++
T Consensus 166 ~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~~~~~d~li~e~t~~~~~~~~~~~H~t~~~a~~~~~~~~~~~lvl 242 (280)
T 2e7y_A 166 RLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEEIRGTELLIHECTFLDARDRRYKNHAAIDEVMESVKAAGVKKVIL 242 (280)
T ss_dssp HHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHHHTTCSCEEEECCBC--------CCCBHHHHHHHHHHHTCCEEEE
T ss_pred HHHhhcCCceecCCccCCEEEEECCCChH---HHHhhcCCCEEEEeCCcCChhhHHhcCCCCHHHHHHHHHHcCCCEEEE
Confidence 59999999986 578889999999999997642 579999999999999999999999
Q ss_pred EccCCCCCh--HHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 212 IGMMHLMDH--EKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 212 tH~s~~~~~--~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
||++++++. +++.+++++.+ .+.++.+|+||++++|
T Consensus 243 ~H~~~~~~~~~~~~~~~~~~~~--~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 243 YHISTRYIRQLKSVIKKYREEM--PDVEILYMDPRKVFEM 280 (280)
T ss_dssp ESCCGGGHHHHHHHHHHHHHHC--TTSEEEECCTTSCEEC
T ss_pred EeecCcCcchHHHHHHHHHHhC--CCceEEEeCCCceeeC
Confidence 999998842 33444444422 1247999999999875
No 9
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.77 E-value=1.1e-17 Score=141.92 Aligned_cols=151 Identities=14% Similarity=0.153 Sum_probs=120.9
Q ss_pred heeeeeecCcEEEEecCC----------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHhCCeeee
Q 025514 46 LQACLQSSFSTIALFVGF----------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVD 103 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~----------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~~~~~~ 103 (251)
.|++|+.++.+||||+|. |+ |+..++.+ ...+++||+++++.+.+.+
T Consensus 38 s~~li~~~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~-~~~~l~~~---~~~~~~v~~~~~~~~~l~~------- 106 (235)
T 3kl7_A 38 GSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHEHGDHL-DPKAIQAV---EKSDTEIIANENSQKKLGK------- 106 (235)
T ss_dssp TEEEEEETTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTC-CHHHHHHH---CCTTCEEEECHHHHHHHTC-------
T ss_pred eEEEEEECCEEEEECCCCCccchhhCCCCCEEEECCCccccC-CHHHHHHh---hcCCCEEEEcHHHHHHhcC-------
Confidence 579999999999999995 66 55555533 2457999999998776632
Q ss_pred cCCCCCCCcccceeEEEec-Cc-eeEeCCEEEEEEEeccCCC--------cceEEEEEc----eEEEeCCCCCCCcchhh
Q 025514 104 TSGIIPGAAVSELQFNIID-EE-PFTVQDLKITPLPVWHGAG--------YRSLGFRFG----NICYISDVSEIPEETYP 169 (251)
Q Consensus 104 ~~~~~~g~~~~~~~~~~i~-~~-~~~~~~~~I~~~~v~H~~~--------~~s~gy~i~----~i~Ys~Dt~~~~e~~~~ 169 (251)
.+.++ ++ ++++++++|+++|+.|+.. ..+.||+|+ +++|+|||++++ ++ +
T Consensus 107 --------------~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~-~~-~ 170 (235)
T 3kl7_A 107 --------------GKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIP-EM-K 170 (235)
T ss_dssp --------------SEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCG-GG-G
T ss_pred --------------cEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchh-hH-H
Confidence 01222 45 7888999999999999751 136899998 899999999875 44 4
Q ss_pred hhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHh
Q 025514 170 FLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLK 229 (251)
Q Consensus 170 ~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~ 229 (251)
.++++|++++++. ...||++++|+++++++++|+++++|++. .+++++++++++
T Consensus 171 ~l~~~Dv~il~~~-----~~~h~~~~ea~~~~~~l~~k~vip~H~~~-~~~~~~~~~l~~ 224 (235)
T 3kl7_A 171 DLKDIDIAFLPVN-----QPYTMTVSQAAKAARMFSPKILYPYHYGD-TKIGELKDALKD 224 (235)
T ss_dssp GCCSCSEEEEECC-----TTTSCCHHHHHHHHHHHCCSEEEEESCTT-CCTTHHHHHTTT
T ss_pred hhcCCCEEEECCC-----CCcccCHHHHHHHHHHcCCCEEEEEcCCC-CCHHHHHHHHhh
Confidence 4679999999996 35799999999999999999999999999 678888877764
No 10
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.73 E-value=3.3e-16 Score=140.70 Aligned_cols=156 Identities=10% Similarity=0.039 Sum_probs=113.5
Q ss_pred CCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCC----------------
Q 025514 80 RHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGA---------------- 142 (251)
Q Consensus 80 ~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~---------------- 142 (251)
++++||+|+++.+.+++. + +. ..+++.++ ++.+++++++|+++++.|+.
T Consensus 137 ~~~~v~~p~~~~~~l~~~-g--~~-----------~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~ 202 (360)
T 2wyl_A 137 DDVPFIGPKTCVDLWIGW-G--VP-----------KERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLP 202 (360)
T ss_dssp TTCCEEECHHHHHHHHHH-T--CC-----------GGGEEECCTTCEEEETTEEEEEEECCCC-----------------
T ss_pred CCCEEEEcHHHHHHHHHc-C--CC-----------hheEEEcCCCCEEEECCEEEEEEeccCcccccccccccccccccc
Confidence 379999999988877652 1 10 12345555 47899999999999999852
Q ss_pred ---CcceEEEEEc----eEEEeCCCCCCCcchhhhhC--CCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEc
Q 025514 143 ---GYRSLGFRFG----NICYISDVSEIPEETYPFLQ--DCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 143 ---~~~s~gy~i~----~i~Ys~Dt~~~~e~~~~~~~--~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH 213 (251)
...++||+|+ +++|+|||.+.+ ++.++.+ ++|++++.+........+||++++|+++++++++|+++++|
T Consensus 203 ~~~~~~~~g~~i~~~g~~i~~sGDt~~~~-~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~~~~~~l~~k~vi~~H 281 (360)
T 2wyl_A 203 DGMDDRAVNYLFKTPGGSLYHSGDSHYSN-YYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFH 281 (360)
T ss_dssp -CCTTTBEEEEEEETTEEEEECTTCCCCT-THHHHHHHSCCCEEEEEBCCCCTTCCCSBCHHHHHHHHHHHTCSEEEEES
T ss_pred cccCcccEEEEEEECCcEEEEeCCCCcCH-HHHHHhhCCCCCEEEecCCCCcccccCCCCHHHHHHHHHHhCCCEEEEEe
Confidence 1358999997 899999999875 4555554 68999997753222346899999999999999999999999
Q ss_pred cCCCC----ChHHHHHHHHhhhhc--CCCcEEEeecCeEEecc
Q 025514 214 MMHLM----DHEKVNEELLKLMET--EGLDVQLSYDGLRVPVM 250 (251)
Q Consensus 214 ~s~~~----~~~~l~~~l~~~~~~--~~~~v~~A~DG~~i~l~ 250 (251)
+++.. +.+++.+++++.... .+..+.++.+|+++++.
T Consensus 282 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 324 (360)
T 2wyl_A 282 HDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWP 324 (360)
T ss_dssp TTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred eccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEec
Confidence 99853 356777666632111 12356677888877763
No 11
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.73 E-value=8.8e-17 Score=138.36 Aligned_cols=151 Identities=17% Similarity=0.193 Sum_probs=114.4
Q ss_pred CCCccEEeC-HHHHHHHHHhCCeeeecCCCCCCCcccceeEEEecCceeEeCCEEEEEEEeccCCC------------cc
Q 025514 79 QRHIPIYVA-MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAG------------YR 145 (251)
Q Consensus 79 ~~~l~iygp-~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~I~~~~v~H~~~------------~~ 145 (251)
...++||++ .++.+.+++. + +. . .+.+ ++++++++++|+++|+.|+.. ..
T Consensus 87 ~~~~~v~~~~~~~~~~l~~~-g--~~-----------~--~~~~-~~~~~~~~~~i~~~pa~H~~~~~~~~p~~~~~~~~ 149 (264)
T 3rpc_A 87 PKSLPIFVQNTADKELITSQ-G--FI-----------D--VRII-FESLEFNGITLRKTGGSHGTVEMYANPVLAPLAGD 149 (264)
T ss_dssp CTTSCEEESSHHHHHHHHHT-T--CS-----------C--EEEC-SSEEEETTEEEEEECCCSSCHHHHTSTTHHHHHCC
T ss_pred ccCCeEEEeCHHHHHHHHhc-C--CC-----------e--eEEe-cccEEECCEEEEEeccccCCccccccccccccccc
Confidence 457899998 8887777652 1 10 1 2333 467899999999999999862 14
Q ss_pred eEEEEEc-----eEEEeCCCCCCCcchhhhhC--CCcEEEEcccCCCC-C--CCCCCCHHHHHHHHHhcCCCeEEEEccC
Q 025514 146 SLGFRFG-----NICYISDVSEIPEETYPFLQ--DCEILIMDALRPDR-S--SSTHFGLPRALEEVRKIQPKRTLFIGMM 215 (251)
Q Consensus 146 s~gy~i~-----~i~Ys~Dt~~~~e~~~~~~~--~~DlLi~E~~~~~~-~--~~~H~t~~ea~~~a~~~~~k~lvltH~s 215 (251)
++||+|+ ++.|+|||++++ ++.++.+ ++|++++++...+. . ...||+++||+++++.+++|+++++|++
T Consensus 150 ~~g~~i~~~~~~~i~~~GDt~~~~-~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~ 228 (264)
T 3rpc_A 150 AMGVIFEAADEPTVYLVGDTVWTS-DVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMD 228 (264)
T ss_dssp CCEEEEECTTSCCEEECCSCCSCH-HHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCS
T ss_pred cEEEEEEeCCccEEEEECCcCchH-HHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEEccc
Confidence 6999996 799999999985 5666554 69999999986432 1 4789999999999999999999999998
Q ss_pred CCC----ChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 216 HLM----DHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 216 ~~~----~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
... +.+++++.+++.. .+.++.+..+|+.++|
T Consensus 229 ~~~~~~~~~~~l~~~~~~~g--~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 229 TVNHTATSRKDVRKFIKGNN--IESHVAVPEDGETITL 264 (264)
T ss_dssp SSTTBCSCHHHHHHHHHHTT--CTTTEECCCTTCEEEC
T ss_pred cccccccCHHHHHHHHHHcC--CCCcEEecCCCCEEeC
Confidence 633 4566766666421 1237899999999875
No 12
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.73 E-value=2.1e-16 Score=143.04 Aligned_cols=155 Identities=8% Similarity=0.010 Sum_probs=113.5
Q ss_pred CCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCC-------------C--
Q 025514 80 RHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGA-------------G-- 143 (251)
Q Consensus 80 ~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~-------------~-- 143 (251)
++++||+|+++.+.+++. + +. ..+++.++ ++.+++++++|+++++.|+. +
T Consensus 161 ~~~~v~~~~~~~~~l~~~-g--~~-----------~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~p~~h~~~~G~~ 226 (379)
T 3bv6_A 161 EHVKFIGPQACVDLWLGW-G--VP-----------QERCIVAKVGDVLEIGDVKIRVLDSFDRTALVTLPKGVSSYDKAI 226 (379)
T ss_dssp TTCEEEECHHHHHHHHHH-T--CC-----------GGGEEECCTTCEEEETTEEEEEEECCCHHHHTCCCTTSCSSCGGG
T ss_pred CCcEEEecHHHHHHHHHc-C--CC-----------hhhEEEeCCCCEEEECCEEEEEEeccccccccccccccccccccc
Confidence 379999999988877652 1 10 12345555 47899999999999999841 0
Q ss_pred -----cceEEEEEc----eEEEeCCCCCCCcchhhhhC--CCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEE
Q 025514 144 -----YRSLGFRFG----NICYISDVSEIPEETYPFLQ--DCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFI 212 (251)
Q Consensus 144 -----~~s~gy~i~----~i~Ys~Dt~~~~e~~~~~~~--~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvlt 212 (251)
..++||+|+ +++|+|||.+.+ ++.++.+ ++|++++......+...+||++++|+++++++++|+++++
T Consensus 227 ~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~-~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~~~~~~l~~k~vi~~ 305 (379)
T 3bv6_A 227 LDGMDERAVNYLIETSGGSVYHSGDSHYSN-YYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDVLRAAESLDCQVVVPF 305 (379)
T ss_dssp GGCHHHHBEEEEEEETTEEEEECTTCCCCT-THHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHHHHHHHHHTCSEEEEE
T ss_pred ccccCCceEEEEEEeCCeEEEEeCCCCccH-HHHHHhhcCCCCEEEecCCCCcccccccCCHHHHHHHHHHcCCCEEEEE
Confidence 248999997 899999999875 4555544 7899999775422234689999999999999999999999
Q ss_pred ccCCCC----ChHHHHHHHHhhhhc--CCCcEEEeecCeEEec
Q 025514 213 GMMHLM----DHEKVNEELLKLMET--EGLDVQLSYDGLRVPV 249 (251)
Q Consensus 213 H~s~~~----~~~~l~~~l~~~~~~--~~~~v~~A~DG~~i~l 249 (251)
|++... +.+++.+.+++..++ .+..+.++++|+++++
T Consensus 306 H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 348 (379)
T 3bv6_A 306 HHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTY 348 (379)
T ss_dssp STTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEE
T ss_pred eecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEe
Confidence 999853 356676666532111 1235667888888876
No 13
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.71 E-value=3.9e-16 Score=143.07 Aligned_cols=141 Identities=12% Similarity=0.167 Sum_probs=97.6
Q ss_pred CccEEeCHHHHHHHHHhCCee---eecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc----
Q 025514 81 HIPIYVAMRDFEVMKKTHYYL---VDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG---- 152 (251)
Q Consensus 81 ~l~iygp~~~~~~l~~~~~~~---~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~---- 152 (251)
+++||+++.+.+.++...... +... ... ......++.++ ++++++++++|+++++.|+. ..++||+|+
T Consensus 107 ~~~iy~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~-~gs~~~~i~~~~~ 182 (429)
T 2az4_A 107 AVPLYTLKETKMILNSLNRKGDFLIPSP--FEE-KNFTREMIGLNKNDVIKVGEISVEIVPVDHDA-YGASALLIRTPDH 182 (429)
T ss_dssp TSCEEEEHHHHHHHHHHTTTSCSSCCCT--TSC-TTCCCCCEEECTTCEEEETTEEEEEEECCCSS-TTCEEEEEEETTE
T ss_pred CCCEEECHHHHHHHHHHHHhCccccccc--ccc-ccccceEEEeCCCCeEEECCEEEEEEECCCCC-hhhEEEEEEeCCc
Confidence 689999999988876632211 1000 000 00123456665 47899999999999999975 259999997
Q ss_pred eEEEeCCCCCCC------cchhhhhCCCcEEEEcccCCCCC-------CCCCCCHHHHHHHHHhc---CCCeEEEEccCC
Q 025514 153 NICYISDVSEIP------EETYPFLQDCEILIMDALRPDRS-------SSTHFGLPRALEEVRKI---QPKRTLFIGMMH 216 (251)
Q Consensus 153 ~i~Ys~Dt~~~~------e~~~~~~~~~DlLi~E~~~~~~~-------~~~H~t~~ea~~~a~~~---~~k~lvltH~s~ 216 (251)
+++|+||+.... +.+.++++++|+||+||++.+.. ..+|++.+++.+.+.++ +.++++++|+++
T Consensus 183 ~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~ 262 (429)
T 2az4_A 183 FITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYP 262 (429)
T ss_dssp EEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCCCCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECT
T ss_pred EEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCcccccccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 899999997422 24677788999999999987532 34599888885544332 367899999997
Q ss_pred CCChHHHHHH
Q 025514 217 LMDHEKVNEE 226 (251)
Q Consensus 217 ~~~~~~l~~~ 226 (251)
.+ ..++++.
T Consensus 263 ~~-~~r~~~~ 271 (429)
T 2az4_A 263 AN-VERFAKI 271 (429)
T ss_dssp TC-HHHHHHH
T ss_pred ch-HHHHHHH
Confidence 66 4444443
No 14
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.69 E-value=5.3e-18 Score=147.74 Aligned_cols=186 Identities=13% Similarity=0.069 Sum_probs=128.3
Q ss_pred hheeeeeecCcEEEEecCC-----------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-----------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMK 95 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-----------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~ 95 (251)
-.|++|+.++..+|||||. |+.|++.+... ..+++||+++.+.+
T Consensus 33 g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~----~~~~~v~~~~~~~~--- 105 (284)
T 2p4z_A 33 GLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLER----NPEVKIYTHKEILN--- 105 (284)
T ss_dssp SCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHH----CTTCEEEEEGGGGS---
T ss_pred EEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHH----cCCCceecCHHHHH---
Confidence 3569999999999999996 77888776532 14689999988743
Q ss_pred HhCCeeeecCCCCCC--Ccc---cceeEEEecCceeEeC-C-EEEEEEEeccCCCcce-E--EEEEceEEEeCCCCCCCc
Q 025514 96 KTHYYLVDTSGIIPG--AAV---SELQFNIIDEEPFTVQ-D-LKITPLPVWHGAGYRS-L--GFRFGNICYISDVSEIPE 165 (251)
Q Consensus 96 ~~~~~~~~~~~~~~g--~~~---~~~~~~~i~~~~~~~~-~-~~I~~~~v~H~~~~~s-~--gy~i~~i~Ys~Dt~~~~e 165 (251)
..+.........+.+ ... ...+++.++ .+++++ + +.+.++|..|+. ++ . +|+++.++|++|+ +++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~~gi~~i~~~~~~h~~--~~~~g~~~~~~~~~y~~D~--~~d 180 (284)
T 2p4z_A 106 KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID-KDAEIEEGFYVITNTDITYDN--EFTTKNFFVEKEGKRIPDK--FLD 180 (284)
T ss_dssp CEEEECSSSCEEECSCCHHHHHHHGGGEEEES-SCEEEETTEEEECSCCCCSCC--HHHHTTEEEEETTEEEECC--CTT
T ss_pred HHhccCccccccccccccchhhhcCceEEEeC-CCeEEeCCEEEEeeeCCcccc--ccCCCceEEEcCCCEecCC--CCC
Confidence 111110000000001 000 011344443 345664 4 677789999987 43 3 4999988999995 456
Q ss_pred chhhhhCCCc--EEEEcccCC-------------C-CC-----CCCCC------CHHHHHHHHHhcCCCeEEEEccCCCC
Q 025514 166 ETYPFLQDCE--ILIMDALRP-------------D-RS-----SSTHF------GLPRALEEVRKIQPKRTLFIGMMHLM 218 (251)
Q Consensus 166 ~~~~~~~~~D--lLi~E~~~~-------------~-~~-----~~~H~------t~~ea~~~a~~~~~k~lvltH~s~~~ 218 (251)
+...+++++| +||.+|+.. . .. ...|+ ++++++++++++++|+++++|+++..
T Consensus 181 e~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~~~ 260 (284)
T 2p4z_A 181 EVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGID 260 (284)
T ss_dssp CCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGCHH
T ss_pred ceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCcHH
Confidence 7888999999 668777632 1 11 36799 99999999999999999999999977
Q ss_pred ChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 219 DHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 219 ~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
+.+++++.++. ++.+|+|||+|++
T Consensus 261 ~~~~~~~~~~~-------~v~~a~~G~~i~l 284 (284)
T 2p4z_A 261 EYGFLKSVLKD-------KISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHHGG-------GEEECCTTCEEEC
T ss_pred HHHHHHHHhCC-------CEEEcCCCcEEeC
Confidence 66666555543 7999999999975
No 15
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.63 E-value=1e-14 Score=138.29 Aligned_cols=172 Identities=13% Similarity=0.066 Sum_probs=118.9
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC--------------------------------------CCC
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF--------------------------------------LPM 66 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~--------------------------------------Hi~ 66 (251)
++||+.+.... .|++++.++..+|||||. |+.
T Consensus 20 ~~LGg~~eig~----------n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHig 89 (562)
T 3bk2_A 20 IPLGGMGEIGK----------NITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIG 89 (562)
T ss_dssp EEEESBSBSSC----------CEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHT
T ss_pred EEecCCCCcCC----------CEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhC
Confidence 56776554432 369999999999999992 788
Q ss_pred CChhhHhhhccCCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCC-EEEEEEEeccCCCc
Q 025514 67 GLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQD-LKITPLPVWHGAGY 144 (251)
Q Consensus 67 GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~-~~I~~~~v~H~~~~ 144 (251)
||+.|......+.++++||+++.+.+.++..+... . . +. ....++.++ ++++++++ ++|+++++.|+. .
T Consensus 90 gl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~-~-~---~~---~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~-~ 160 (562)
T 3bk2_A 90 GLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEF-G-L---RP---GAFNLKEISPDDRIQVGRYFTLDLFRMTHSI-P 160 (562)
T ss_dssp THHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHT-T-C---CS---TTSEEEEECTTCEEEETTTEEEEEEECCCSS-S
T ss_pred CHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHc-C-C---Cc---CCceEEEECCCCEEEeCCCEEEEEEECCCCC-c
Confidence 88877643223445799999999988876642210 0 0 00 023456665 47899999 999999999976 2
Q ss_pred ceEEEEEc----eEEEeCCCCCC--------Cc--chhhhh-CCCcEEEEcccCCCCCCCCCCC----HH-HHHHHHHhc
Q 025514 145 RSLGFRFG----NICYISDVSEI--------PE--ETYPFL-QDCEILIMDALRPDRSSSTHFG----LP-RALEEVRKI 204 (251)
Q Consensus 145 ~s~gy~i~----~i~Ys~Dt~~~--------~e--~~~~~~-~~~DlLi~E~~~~~~~~~~H~t----~~-ea~~~a~~~ 204 (251)
.++||+|+ +++|+||+..- .+ .+.+.. +++|+|++|+++...+ +|.. +. ++.+++++.
T Consensus 161 gs~~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~--g~~~~e~~v~~~l~~~~~~~ 238 (562)
T 3bk2_A 161 DNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERP--GYTPSEMEIAKELDRVIGRA 238 (562)
T ss_dssp SCEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCC--SCCCCHHHHHHHHHHHHHHC
T ss_pred ccEEEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCC--CCCChHHHHHHHHHHHHHhC
Confidence 69999996 89999999531 11 122233 6899999999987543 3333 22 333555555
Q ss_pred CCCeEEEEccCCCC
Q 025514 205 QPKRTLFIGMMHLM 218 (251)
Q Consensus 205 ~~k~lvltH~s~~~ 218 (251)
+ ++++++|++++.
T Consensus 239 ~-grvii~~fas~~ 251 (562)
T 3bk2_A 239 P-GRVFVTTFASHI 251 (562)
T ss_dssp S-SCEEEECCTTCH
T ss_pred C-CEEEEEEccccc
Confidence 5 899999999866
No 16
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.61 E-value=1.4e-14 Score=121.61 Aligned_cols=90 Identities=16% Similarity=0.287 Sum_probs=77.3
Q ss_pred ceeEeCCEEEEEEEeccCCC-----cceEEEEEc----eEEEeCCCCCCCc-chhhhhCCCcEEEEcccCCCCCCCCCCC
Q 025514 124 EPFTVQDLKITPLPVWHGAG-----YRSLGFRFG----NICYISDVSEIPE-ETYPFLQDCEILIMDALRPDRSSSTHFG 193 (251)
Q Consensus 124 ~~~~~~~~~I~~~~v~H~~~-----~~s~gy~i~----~i~Ys~Dt~~~~e-~~~~~~~~~DlLi~E~~~~~~~~~~H~t 193 (251)
..+++++++|+++++.|+.. ..++||+|+ +++|+|||++.++ +.++.++++|++++|+. ..+|++
T Consensus 79 g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g-----~~~h~~ 153 (220)
T 1vjn_A 79 GAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVG-----GTYTIG 153 (220)
T ss_dssp EEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEECC-----SSSSCC
T ss_pred CeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcchHHHHHhhCCCCEEEEcCC-----CcCcCC
Confidence 46888999999999999862 257999997 8999999998763 45666789999999994 347999
Q ss_pred HHHHHHHHHhcCCCeEEEEccCCCC
Q 025514 194 LPRALEEVRKIQPKRTLFIGMMHLM 218 (251)
Q Consensus 194 ~~ea~~~a~~~~~k~lvltH~s~~~ 218 (251)
+++|+++++++++|+++++|+++.+
T Consensus 154 ~~~a~~~~~~~~~k~vi~~H~~~~~ 178 (220)
T 1vjn_A 154 PKEAKEVADLLNAKVIIPMHYKTKY 178 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCCSS
T ss_pred HHHHHHHHHhcCCCEEEEEeccccc
Confidence 9999999999999999999999975
No 17
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.49 E-value=4e-13 Score=123.49 Aligned_cols=187 Identities=12% Similarity=0.057 Sum_probs=120.1
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC-------------------------------CCCCChhhHh
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRD 73 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~ 73 (251)
++||+.+.++.+ |++|+.++.+||||||. |++|++.|..
T Consensus 4 ~~LG~~~~vg~s----------~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~ 73 (431)
T 3iek_A 4 VPFGAAREVTGS----------AHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFR 73 (431)
T ss_dssp EECSCSSSSSCC----------CEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHH
T ss_pred EEeCCCCCCCCc----------EEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHH
Confidence 467776655543 59999999999999995 7777777653
Q ss_pred hhccCCCCccEEeCHHHHHHHHHhCCe---eeecCCCCCCCc-ccc-eeEEEec-CceeEeCCEEEEEEEeccCCCcceE
Q 025514 74 WTNNVQRHIPIYVAMRDFEVMKKTHYY---LVDTSGIIPGAA-VSE-LQFNIID-EEPFTVQDLKITPLPVWHGAGYRSL 147 (251)
Q Consensus 74 ~~~~~~~~l~iygp~~~~~~l~~~~~~---~~~~~~~~~g~~-~~~-~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~ 147 (251)
. ..+.+||+++.+.+.++..+.. +.... .+.... ... -.++.++ ++++++++++|+++++.|.. .+.
T Consensus 74 ~----~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~-~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~--Gs~ 146 (431)
T 3iek_A 74 E----GYRGPVYATRATVLLMEIVLEDALKVMDEP-FFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLP--GSA 146 (431)
T ss_dssp T----TCCSCEEECHHHHHHHHHHHHHHHHHCSSC-SSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSST--TCE
T ss_pred c----CCCCeEEEcHHHHHHHHHHHHHHHhhcccC-CCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCc--Cce
Confidence 2 3468899999998876642110 00000 000000 000 1245555 47888999999999999988 899
Q ss_pred EEEEc----eEEEeCCCCCCCcchh---hhhCCCcEEEEcccCCCCCCCC-CCCHHHHHHHHHhc--CCCeEEEEccCCC
Q 025514 148 GFRFG----NICYISDVSEIPEETY---PFLQDCEILIMDALRPDRSSST-HFGLPRALEEVRKI--QPKRTLFIGMMHL 217 (251)
Q Consensus 148 gy~i~----~i~Ys~Dt~~~~e~~~---~~~~~~DlLi~E~~~~~~~~~~-H~t~~ea~~~a~~~--~~k~lvltH~s~~ 217 (251)
+|+|+ +++|+||+++.++.+. +..+++|+||+|++|.++.+.. +...++..+.+++. .-.++++..++-.
T Consensus 147 ~~~i~~~~~~ilfsGD~~~~~~~~l~~~~~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa~g 226 (431)
T 3iek_A 147 FVVAQGEGRTLVYSGDLGNREKDVLPDPSLPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVE 226 (431)
T ss_dssp EEEEEETTEEEEECCCCCCTTSSSSCCCCBCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTT
T ss_pred EEEEEECCEEEEEeCCCCCCCCcccCCccccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEeccch
Confidence 99997 7999999997654443 5667899999999998754322 12233333344332 3347777777632
Q ss_pred CChHHHHHHHHh
Q 025514 218 MDHEKVNEELLK 229 (251)
Q Consensus 218 ~~~~~l~~~l~~ 229 (251)
- ..++...+.+
T Consensus 227 R-~qell~~l~~ 237 (431)
T 3iek_A 227 R-AQEILYVLYT 237 (431)
T ss_dssp H-HHHHHHHHHH
T ss_pred H-HHHHHHHHHH
Confidence 2 3444444443
No 18
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.47 E-value=1.7e-12 Score=122.80 Aligned_cols=157 Identities=15% Similarity=0.147 Sum_probs=110.1
Q ss_pred heeeeeecCcEEEEecCC--------------------------------------CCCCChhhHhhhccCCCCccEEeC
Q 025514 46 LQACLQSSFSTIALFVGF--------------------------------------LPMGLDDLRDWTNNVQRHIPIYVA 87 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~--------------------------------------Hi~GL~~l~~~~~~~~~~l~iygp 87 (251)
+|++++.++..+|||||. |++|++.+.. ..+++||++
T Consensus 23 n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~-----~~~~pIy~t 97 (555)
T 3zq4_A 23 NTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLR-----QVNIPVYGG 97 (555)
T ss_dssp CEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHT-----TCCCCEEEC
T ss_pred EEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHH-----hcCceEEEC
Confidence 469999999999999994 6666666552 136789999
Q ss_pred HHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc----eEEEeCCCCC
Q 025514 88 MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSE 162 (251)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~----~i~Ys~Dt~~ 162 (251)
+.+.+.++..+... .. .+...++.++ ++++++++++|+++++.|+. ..+++|+|+ +++|+||+..
T Consensus 98 ~~t~~ll~~~l~~~-~~--------~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~-pgs~~~~i~~~~~~il~tGD~~~ 167 (555)
T 3zq4_A 98 KLAIGLLRNKLEEH-GL--------LRQTKLNIIGEDDIVKFRKTAVSFFRTTHSI-PDSYGIVVKTPPGNIVHTGDFKF 167 (555)
T ss_dssp HHHHHHHHHHHHHH-ST--------TTTCCEEECCTTCCEEETTEEEEEEEEBCSS-SSEEEEEEEETTEEEEECCSCBC
T ss_pred HHHHHHHHHHHHHc-Cc--------cCCCceEEeCCCCEEEECCEEEEEEeCCCCC-cCcEEEEEEECCcEEEEeCCCCC
Confidence 99988877643210 00 0123456665 47899999999999999965 279999996 8999999975
Q ss_pred CCc------chhhhh----CCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhc---CCCeEEEEccCCCC
Q 025514 163 IPE------ETYPFL----QDCEILIMDALRPDRSSSTHFGLPRALEEVRKI---QPKRTLFIGMMHLM 218 (251)
Q Consensus 163 ~~e------~~~~~~----~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~---~~k~lvltH~s~~~ 218 (251)
..+ .+..+. +++|+|++|+++.+.+.. +.+-++..+.++++ ..+++++++|+...
T Consensus 168 ~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~-~~se~~v~~~i~~~~~~~~grvii~~fasnv 235 (555)
T 3zq4_A 168 DFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEF-TMSERRVGESIHDIFRKVDGRIIFATFASNI 235 (555)
T ss_dssp CSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSC-CCCHHHHHHHHHHHHHHCCSCEEEECCTTCH
T ss_pred CCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCC-CCCHHHHHHHHHHHHHhCCCEEEEEEChhHH
Confidence 321 233333 589999999999875432 34445554444333 25689999998654
No 19
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.35 E-value=2.6e-11 Score=109.16 Aligned_cols=146 Identities=14% Similarity=0.031 Sum_probs=97.3
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC------------------CCCCChhhHhhhccCCCCccEEe
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF------------------LPMGLDDLRDWTNNVQRHIPIYV 86 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~------------------Hi~GL~~l~~~~~~~~~~l~iyg 86 (251)
+.+.+|.|..+...|.-+. ++..+|..++||+.. |+.||+. ...++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~p~-----~~~~pG~~ilVD~f~~~~~~~IdaI~lTH~H~DHiggl~~--------~~~~pIy~ 78 (367)
T 4b87_A 12 KKIPESSNVGGSRKKTCPF-----YKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSK--------HFTFPVYC 78 (367)
T ss_dssp -----------CCCCCCCG-----GGBCTTSSEEESCCSSSSCTTCCEEECCCCCHHHHTTCST--------TCCSCEEE
T ss_pred hcccccccCCCCCCCCCce-----EEEECCCeEEEeCCCcCCccCCcEEEECcChHHHhCCccc--------ccCCcEEE
Confidence 3444566666655343333 223668899999874 6666651 23578999
Q ss_pred CHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc-----eEEEeCCC
Q 025514 87 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG-----NICYISDV 160 (251)
Q Consensus 87 p~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~-----~i~Ys~Dt 160 (251)
++.+.+.++..++.. ...++.++ ++++++++++|+++++.|.. .+++|+|+ +++|+||+
T Consensus 79 s~~t~~ll~~~l~~~-------------~~~~~~l~~g~~~~ig~~~v~~~~agH~~--gs~~~~i~~~~g~~il~tGD~ 143 (367)
T 4b87_A 79 SEITGNLLKNKLHVQ-------------EQYIHPLPLDTECIVNGVKVVLLDANHCP--GAVMILFYLPNGTVILHTGDF 143 (367)
T ss_dssp CHHHHHHHHHHSCCC-------------GGGEEECCBTSCEEETTEEEEEEECSSST--TCEEEEEECTTSCEEEECCSC
T ss_pred CHHHHHHHHHHhccc-------------cceEEEeCCCCEEEECCEEEEEEeCCCcC--CcEEEEEEcCCCcEEEEecCc
Confidence 999999887754311 11245555 47899999999999999976 89999995 59999999
Q ss_pred CCCCcchhhhh--CCCcEEEEcccCCCCCCCCCCCHHHHHH
Q 025514 161 SEIPEETYPFL--QDCEILIMDALRPDRSSSTHFGLPRALE 199 (251)
Q Consensus 161 ~~~~e~~~~~~--~~~DlLi~E~~~~~~~~~~H~t~~ea~~ 199 (251)
+..++.....+ +++|+||+||++.+. ...|.+-+++.+
T Consensus 144 ~~~~~~~~~~l~~~~~D~Li~EsTy~~~-~~~~ps~~~~~~ 183 (367)
T 4b87_A 144 RADPSMERSLLADQKVHMLYLDTTYCSP-EYTFPSQQEVIR 183 (367)
T ss_dssp CCCGGGGGSGGGTSCCCEEEECCTTCST-TCCCCCHHHHHH
T ss_pred ccCcccchhhhccCCCCEEEEecccCCC-CCCCCCHHHHHH
Confidence 97654332334 489999999999863 345788777665
No 20
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.26 E-value=2.2e-11 Score=118.34 Aligned_cols=140 Identities=10% Similarity=0.075 Sum_probs=91.9
Q ss_pred heeeeeecCcEEEEecCC--------------------------------CCCCChhhHh-hhccCCCCccEEeCHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRD-WTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~-~~~~~~~~l~iygp~~~~~ 92 (251)
.|++|+.++..||||||. |++||+.|.. |......+++||+++.+.+
T Consensus 16 n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~ 95 (717)
T 2i7x_A 16 VGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVIN 95 (717)
T ss_dssp CCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHH
T ss_pred CEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHH
Confidence 469999999999999995 6777777653 1100113589999999877
Q ss_pred HHHHhCCeeeecCCCCCC----Ccc-----cce-eEEEec-CceeEe----CCEEEEEEEeccCCCcceEEEEEc----e
Q 025514 93 VMKKTHYYLVDTSGIIPG----AAV-----SEL-QFNIID-EEPFTV----QDLKITPLPVWHGAGYRSLGFRFG----N 153 (251)
Q Consensus 93 ~l~~~~~~~~~~~~~~~g----~~~-----~~~-~~~~i~-~~~~~~----~~~~I~~~~v~H~~~~~s~gy~i~----~ 153 (251)
.++..+...+......+. .+. ..+ .++.++ ++++.+ ++++|+++++.|.. .+.+|+|+ +
T Consensus 96 l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~--Gs~~~~I~~~~~~ 173 (717)
T 2i7x_A 96 LGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCP--GGSIWCISTYSEK 173 (717)
T ss_dssp HHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSST--TCEEEEEECSSCE
T ss_pred HHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCC--CcEEEEEEeCCCE
Confidence 544321000000000000 000 001 245555 477888 99999999999997 89999997 8
Q ss_pred EEEeCCCCCCCcch-------------hhhhCCCcEEEEcccCCCCC
Q 025514 154 ICYISDVSEIPEET-------------YPFLQDCEILIMDALRPDRS 187 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~-------------~~~~~~~DlLi~E~~~~~~~ 187 (251)
++|+||++..++.+ ++.+.++|+||+|+++.+..
T Consensus 174 IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~ 220 (717)
T 2i7x_A 174 LVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSS 220 (717)
T ss_dssp EEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCS
T ss_pred EEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCC
Confidence 99999997543322 23467899999999997654
No 21
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.26 E-value=9.9e-11 Score=112.71 Aligned_cols=204 Identities=17% Similarity=0.112 Sum_probs=118.0
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCCCC---------------------------------------
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGFLP--------------------------------------- 65 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~Hi--------------------------------------- 65 (251)
++||+.+..+. .|++|+.++..||||||...
T Consensus 192 ~~LG~~~~vg~----------s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DH 261 (651)
T 3af5_A 192 TGLGGFREVGR----------SALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDH 261 (651)
T ss_dssp EEEECSSSSSC----------CEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHH
T ss_pred EEEecCCCCCC----------cEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHh
Confidence 56776554432 46999999999999999621
Q ss_pred -CCChhhHhhhccCC-CCccEEeCHHHHHHHHHhCC-ee--eecCCCCCCCcc-c-----ceeEEEec-CceeEe-CCEE
Q 025514 66 -MGLDDLRDWTNNVQ-RHIPIYVAMRDFEVMKKTHY-YL--VDTSGIIPGAAV-S-----ELQFNIID-EEPFTV-QDLK 132 (251)
Q Consensus 66 -~GL~~l~~~~~~~~-~~l~iygp~~~~~~l~~~~~-~~--~~~~~~~~g~~~-~-----~~~~~~i~-~~~~~~-~~~~ 132 (251)
+|++.|. ... .+.+||+++.+.+.++..+. +. .......+. +. . ...++.++ ++++++ ++++
T Consensus 262 iGglp~L~----~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~l~ggi~ 336 (651)
T 3af5_A 262 CGMLPYLF----RYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPL-YRPRDIKEVIKHTITLDYGEVRDISPDIR 336 (651)
T ss_dssp HTTHHHHH----HTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCS-SCHHHHHHHHHTEEECCTTCCEEEETTEE
T ss_pred hcCHHHHH----hcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCC-CCHHHHHHhhhcEEEeCCCCEEEecCCEE
Confidence 1111111 112 36899999999876653211 00 000000000 00 0 01245555 478999 9999
Q ss_pred EEEEEeccCCCcceEEEEEc------eEEEeCCCCCCCcchhh----hhCCCcEEEEcccCCCCCCCCCCCHH----HHH
Q 025514 133 ITPLPVWHGAGYRSLGFRFG------NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGLP----RAL 198 (251)
Q Consensus 133 I~~~~v~H~~~~~s~gy~i~------~i~Ys~Dt~~~~e~~~~----~~~~~DlLi~E~~~~~~~~~~H~t~~----ea~ 198 (251)
|+++++.|.. .+++|.++ +++|+||+++.++.+++ ...++|+||+||++.++. ..|.+-. +..
T Consensus 337 v~~~~~gH~~--Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~-~~h~s~~~~~~~l~ 413 (651)
T 3af5_A 337 LTLHNAGHIL--GSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGAN-DIQMPREEAEKRLI 413 (651)
T ss_dssp EEEEECSSST--TCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTT-CCCCCHHHHHHHHH
T ss_pred EEEecCCCCc--CcEEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCC-CCCCCHHHHHHHHH
Confidence 9999999977 89999996 79999999876543443 346899999999998643 1233322 223
Q ss_pred HHHHhc--CCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEE
Q 025514 199 EEVRKI--QPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRV 247 (251)
Q Consensus 199 ~~a~~~--~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i 247 (251)
+.+++. .-+++++..++- ....++...+.+...+...++.+..|||..
T Consensus 414 ~~i~~~l~~~g~vlIp~fav-gR~qell~~l~~~~~~~~l~~~I~~dg~a~ 463 (651)
T 3af5_A 414 EVIHNTIKRGGKVLIPAMAV-GRAQEVMMVLEEYARIGGIEVPIYLDGMIW 463 (651)
T ss_dssp HHHHHHHHTTCEEEEECCTT-THHHHHHHHHHHHHTTTCCCSCEEEESSHH
T ss_pred HHHHHHHhCCCEEEEeccCc-cHHHHHHHHHHHhhhhcCCCCcEEEechHH
Confidence 333332 334666666652 224455444443221111124555677654
No 22
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.24 E-value=7.8e-11 Score=108.81 Aligned_cols=147 Identities=14% Similarity=0.028 Sum_probs=94.2
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC--------------------------------CCCCChhhH
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF--------------------------------LPMGLDDLR 72 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~ 72 (251)
++||+.+.... .|++|+.++..||||||. |++||+.+.
T Consensus 15 ~~LG~~~~vg~----------s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~ 84 (459)
T 2i7t_A 15 RPLGAGQEVGR----------SCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFL 84 (459)
T ss_dssp EEEESSSSSSS----------CEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHH
T ss_pred EEEecCCCCCC----------CEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHH
Confidence 46777554422 469999999999999994 666776665
Q ss_pred hhhccCCCCccEEeCHHHHHHHHHhCC-e--eeecC---CCCCCCcc-c-ceeEEEec-CceeEeCCEEEEEEEeccCCC
Q 025514 73 DWTNNVQRHIPIYVAMRDFEVMKKTHY-Y--LVDTS---GIIPGAAV-S-ELQFNIID-EEPFTVQDLKITPLPVWHGAG 143 (251)
Q Consensus 73 ~~~~~~~~~l~iygp~~~~~~l~~~~~-~--~~~~~---~~~~g~~~-~-~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~ 143 (251)
.. ...+.+||+++.+.+.+...+. + +.... ..+..... . .-.++.++ ++++++++++|++++..|..
T Consensus 85 ~~---~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~- 160 (459)
T 2i7t_A 85 QK---TSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVL- 160 (459)
T ss_dssp HH---SSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSST-
T ss_pred Hh---cCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCcc-
Confidence 22 1235789999988765443211 0 00000 00000000 0 01345555 37888999999999999998
Q ss_pred cceEEEEEc----eEEEeCCCCCCCcchhh---h-hCCCcEEEEcccCCCC
Q 025514 144 YRSLGFRFG----NICYISDVSEIPEETYP---F-LQDCEILIMDALRPDR 186 (251)
Q Consensus 144 ~~s~gy~i~----~i~Ys~Dt~~~~e~~~~---~-~~~~DlLi~E~~~~~~ 186 (251)
.+.+|+|+ +++|+||+.+.++.... + ..++|+||+|++|.+.
T Consensus 161 -Gs~~~~i~~~~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~ 210 (459)
T 2i7t_A 161 -GAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTH 210 (459)
T ss_dssp -TCEEEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTC
T ss_pred -CcEEEEEEECCcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCC
Confidence 89999997 89999999976542221 1 2489999999999863
No 23
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.20 E-value=6.4e-11 Score=113.77 Aligned_cols=160 Identities=14% Similarity=0.053 Sum_probs=102.4
Q ss_pred heeeeeecCcEEEEecCC-----------------------------------CCCCChhhHhhhccCCCCccEEeCHHH
Q 025514 46 LQACLQSSFSTIALFVGF-----------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRD 90 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~-----------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~ 90 (251)
.|++|+.++..||||||. |++||+.|... ..+.+||+++.+
T Consensus 194 s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~----~~~~~Iy~t~~t 269 (636)
T 2ycb_A 194 SCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY----GYDGPVYCTAPT 269 (636)
T ss_dssp CEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT----TCCSCEEECHHH
T ss_pred CEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc----CCCCeEEEcchH
Confidence 469999999999999995 55555555421 346899999999
Q ss_pred HHHHHHhCCeee---ecCCCCCCCcc-cc-----eeEEEec-CceeEe-CCEEEEEEEeccCCCcceEEEEEc------e
Q 025514 91 FEVMKKTHYYLV---DTSGIIPGAAV-SE-----LQFNIID-EEPFTV-QDLKITPLPVWHGAGYRSLGFRFG------N 153 (251)
Q Consensus 91 ~~~l~~~~~~~~---~~~~~~~g~~~-~~-----~~~~~i~-~~~~~~-~~~~I~~~~v~H~~~~~s~gy~i~------~ 153 (251)
.+.++..+.... ......+. +. .. -.++.++ ++++++ ++++|+++++.|.. .+++|.++ +
T Consensus 270 ~~l~~~~l~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~--Gs~~~~i~~~~~~~~ 346 (636)
T 2ycb_A 270 RDLMTLLQLDHIDIAHREDEPLP-FNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHIL--GSAMAHLHIGDGQHN 346 (636)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCS-CCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSST--TCEEEEEEETTTTTC
T ss_pred HHHHHHHHHHHHHhhhhcCCCCC-CCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCC--CcEEEEEEECCCeEE
Confidence 876653211000 00000000 00 00 1235555 478999 99999999999977 89999996 6
Q ss_pred EEEeCCCCCCCcchhh----hhCCCcEEEEcccCCCCCCCCCCC----HHHHHHHHHh---cCCCeEEEEc
Q 025514 154 ICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFG----LPRALEEVRK---IQPKRTLFIG 213 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~~~----~~~~~DlLi~E~~~~~~~~~~H~t----~~ea~~~a~~---~~~k~lvltH 213 (251)
++|+||+++.++.+++ ...++|+||+||++.+.. ..|.+ .++..+.+++ .+.+.++-+|
T Consensus 347 ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~f 416 (636)
T 2ycb_A 347 MVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHE-DVQPSRNRAEKELVKTIYSTLRRGGKILIPVF 416 (636)
T ss_dssp EEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGG-GCCCCHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 9999999875543443 356899999999998643 12333 3444455554 3555555555
No 24
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.13 E-value=9.8e-10 Score=105.59 Aligned_cols=204 Identities=15% Similarity=0.034 Sum_probs=116.8
Q ss_pred eeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC----------------------------------CCCCChh
Q 025514 25 ISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF----------------------------------LPMGLDD 70 (251)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~----------------------------------Hi~GL~~ 70 (251)
++||+.+..+. .|++|+.++..+|||||. |++|++.
T Consensus 187 ~~LG~~~evg~----------s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~ 256 (640)
T 2xr1_A 187 TALGGCKEVGR----------SCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPL 256 (640)
T ss_dssp EEEECSSSSBC----------CEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHH
T ss_pred EEEecCCCCCC----------cEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHH
Confidence 56665554432 469999999999999995 2233333
Q ss_pred hHhhhccCCCCccEEeCHHHHHHHHHhCC-e--eeecCCCCCCCcc-cc-----eeEEEec-CceeEe-CCEEEEEEEec
Q 025514 71 LRDWTNNVQRHIPIYVAMRDFEVMKKTHY-Y--LVDTSGIIPGAAV-SE-----LQFNIID-EEPFTV-QDLKITPLPVW 139 (251)
Q Consensus 71 l~~~~~~~~~~l~iygp~~~~~~l~~~~~-~--~~~~~~~~~g~~~-~~-----~~~~~i~-~~~~~~-~~~~I~~~~v~ 139 (251)
|.. ...+.+||+++.+.+.++..+. + .......... +. .. -.++.++ ++.+++ ++++|+++++.
T Consensus 257 L~~----~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~-~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~G 331 (640)
T 2xr1_A 257 LFK----YGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIP-YESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAG 331 (640)
T ss_dssp HHH----TTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCC-SCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECS
T ss_pred HHh----cCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCC-CCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCC
Confidence 221 1345799999999876643211 0 0000000000 00 00 0244554 478999 99999999999
Q ss_pred cCCCcceEEEEEc------eEEEeCCCCCCCcchhh----hhCCCcEEEEcccCCCCCCCCCCCHHHH-HHHHHhcC---
Q 025514 140 HGAGYRSLGFRFG------NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGLPRA-LEEVRKIQ--- 205 (251)
Q Consensus 140 H~~~~~s~gy~i~------~i~Ys~Dt~~~~e~~~~----~~~~~DlLi~E~~~~~~~~~~H~t~~ea-~~~a~~~~--- 205 (251)
|.. .+++|.++ +++|+||+++.++.+++ ...++|+|++|+++.+.. ..|.+..+. .++.+.+.
T Consensus 332 H~~--Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~-~~h~s~~~~~~~l~~~i~~~~ 408 (640)
T 2xr1_A 332 HIL--GSAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNAN-AFQPALKDAEKHLQMVVKNTI 408 (640)
T ss_dssp SST--TCEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTT-CCCCCHHHHHHHHHHHC----
T ss_pred CCc--CcEEEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCc-cCCCCHHHHHHHHHHHHHHHH
Confidence 977 89999996 79999999875443443 246899999999998643 235443332 22223222
Q ss_pred --CCeEEEEccCCCCChHHHHHHHHhhhhc-CCCcEEEeecCeEE
Q 025514 206 --PKRTLFIGMMHLMDHEKVNEELLKLMET-EGLDVQLSYDGLRV 247 (251)
Q Consensus 206 --~k~lvltH~s~~~~~~~l~~~l~~~~~~-~~~~v~~A~DG~~i 247 (251)
-.++++..++-.- ..++...+.+...+ .-.++.+..|||..
T Consensus 409 ~~~g~vlIp~favGR-~qell~~l~~~~~~~~~~~~~V~~dg~a~ 452 (640)
T 2xr1_A 409 ERGGIAVIPAFAVGR-SQEVMIVLEESIRKGLIPEVPVYLDGMIW 452 (640)
T ss_dssp ----CEEEECCTTTH-HHHHHHHHHHHHHHTSSCCCCEEEESSHH
T ss_pred hcCCeEEEEecccch-HHHHHHHHHHHHHhCCCCCCcEEEEhHHH
Confidence 2356666655322 34444444432211 00235566678754
No 25
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.12 E-value=8.6e-10 Score=98.08 Aligned_cols=135 Identities=14% Similarity=0.125 Sum_probs=88.5
Q ss_pred CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEecCceeEeCCEEEEEEEeccCCC
Q 025514 64 LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAG 143 (251)
Q Consensus 64 Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~I~~~~v~H~~~ 143 (251)
|+.||+.+. +++||+++.+.+.++..+... .... .. .+.-+...++++.+.+++++|+++++.|..
T Consensus 37 Higgl~~l~--------~~pVy~s~~t~~ll~~~l~~~-~~~~--~~--~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~- 102 (336)
T 3zdk_A 37 HTVGLSSTW--------ARPLYCSPITAHLLHRHLQVS-KQWI--QA--LEVGESHVLPLDEIGQETMTVTLLDANHCP- 102 (336)
T ss_dssp GSTTCSTTC--------CSCEEECHHHHHHHHHHHCCC-TTTE--EE--CCTTSEEEEESSSSSSCEEEEEEEECSSST-
T ss_pred HHCchHHHc--------CCCEEecHHHHHHHHHhhhhc-ccce--Ee--cCCCCeEEecCcccccCCEEEEEEECCCCc-
Confidence 888887742 478999999999888753211 0000 00 000001112223345589999999999966
Q ss_pred cceEEEEEc----eEEEeCCCCCCCcchhh-----hhCCCcEEEEcccCCCCCCCCCCCHHHH----HHHHHhcCCCeEE
Q 025514 144 YRSLGFRFG----NICYISDVSEIPEETYP-----FLQDCEILIMDALRPDRSSSTHFGLPRA----LEEVRKIQPKRTL 210 (251)
Q Consensus 144 ~~s~gy~i~----~i~Ys~Dt~~~~e~~~~-----~~~~~DlLi~E~~~~~~~~~~H~t~~ea----~~~a~~~~~k~lv 210 (251)
.++||+|+ +++|+||++..+ +..+ ..+++|+|++|+++.++.. .|.+-+++ .+++++..-++++
T Consensus 103 -gs~~~~i~~~~~~i~~tGD~~~~~-~~~~~~~l~~~~~vD~Li~DsT~~~~~~-~~pse~~v~~~l~~~i~~~~~g~vi 179 (336)
T 3zdk_A 103 -GSVMFLFEGYFGTILYTGDFRYTP-SMLKEPALTLGKQIHTLYLDNTNCNPAL-VLPSRQEAAHQIVQLIRKHPQHNIK 179 (336)
T ss_dssp -TCEEEEEEETTEEEEECCSCCCCG-GGGGCGGGSSCCCCSEEEECCTBCCTTC-CCCCHHHHHHHHHHHHHTCTTSEEE
T ss_pred -ceEEEEEEeCCceEEEeCCCCCCc-ccccchhhhccCCccEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHhCCCCcEE
Confidence 89999997 899999998654 3332 2578999999999987533 34554443 4444554445899
Q ss_pred EEccC
Q 025514 211 FIGMM 215 (251)
Q Consensus 211 ltH~s 215 (251)
+.+++
T Consensus 180 i~~f~ 184 (336)
T 3zdk_A 180 IGLYS 184 (336)
T ss_dssp EEECS
T ss_pred Eeecc
Confidence 99983
No 26
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=98.72 E-value=6.6e-08 Score=81.79 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=97.6
Q ss_pred hheeeeeecCcEEEEecCC------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHH----
Q 025514 45 ILQACLQSSFSTIALFVGF------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKK---- 96 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~---- 96 (251)
..|++|+.++..+|||+|. |+.|+..+... ...+||+++...+.+.+
T Consensus 20 ~~~~li~~~~~~iLiD~G~~~~~~~l~~~~~i~~vi~TH~H~DH~gg~~~l~~~-----~~~~i~~~~~~~~~l~~~~~~ 94 (261)
T 3adr_A 20 ATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQV-----YKAKVLVKSGFKKYLTSEDGL 94 (261)
T ss_dssp SEEEEEECSSCEEEECCCCTTCCCCCTTCSCCCEEECSCCSGGGTTTHHHHHHH-----SCCEEEEETTCTHHHHSHHHH
T ss_pred eEEEEEEcCCcEEEEeCCCCCChhhcCCCCCCcEEEECCCCccccCCHHHHHHH-----hCCeEEECHHHHHHhcCchhH
Confidence 3568897768899999994 77777666532 15789998876554432
Q ss_pred ---------hCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEceEEEeCCCCCCCc
Q 025514 97 ---------THYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFGNICYISDVSEIPE 165 (251)
Q Consensus 97 ---------~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~i~Ys~Dt~~~~e 165 (251)
.+..+......... ..+..++..++ ++.+.+++++|+.++++ |.. .+++|++++++|+||+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~--~~~~~~~~~~lf~GD~~~~~- 170 (261)
T 3adr_A 95 KKLNESAEKVLGDLYYVYGGLEK-KLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHAR--HHMSVLVDDFLFTGDSAGAY- 170 (261)
T ss_dssp HHHHHHHHHHHTHHHHHHCCCCS-CCCGGGEEEECSCCEEECSSSEEEEEECTTSCT--TCEEEEETTEEEEETSSCEE-
T ss_pred HHHHHHHHHHHHHHHHHhccccc-CCCccceEecCCCCEEEECCEEEEEEECCCCCC--ccEEEEECCEEEEcCccccc-
Confidence 01100000000000 01111244454 47889999999999998 887 89999988999999997532
Q ss_pred chhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEccCCCC
Q 025514 166 ETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 218 (251)
Q Consensus 166 ~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~ 218 (251)
. . ..+..+.. ....+..+.++++.+++.+++.++..|..+..
T Consensus 171 -~----~--~~~~~~~~----~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 171 -F----N--GVVIPTTP----PVIDYKMYMESLKRQIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp -E----T--TEEECCCC----SCCCHHHHHHHHHHHHHTCCSEEEETTTEEEC
T ss_pred -c----c--ccccCCCC----CCCCHHHHHHHHHHHHcCCCCEEEeCCCCccC
Confidence 1 1 12322211 11345566677777888899999999988765
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.26 E-value=6.8e-06 Score=67.46 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=73.2
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+.++..+|||||. |+.|+..+.. ..++||+++.+.+.
T Consensus 31 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~~ 104 (219)
T 3l6n_A 31 ANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN------KGIKTYATAKTNEF 104 (219)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH------TTCEEEECHHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh------CCCEEEEcHHHHHH
Confidence 3579999999999999994 8889888763 26899999999888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEe--ccCCCcceEEEEEc--eEEEeCCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPV--WHGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v--~H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
+++... + ...+.++ ++.+.+++++|+.+++ .|.. .+++|.+. +++|+||+-.
T Consensus 105 ~~~~~~---------~------~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~ 161 (219)
T 3l6n_A 105 LKKDGK---------A------TSTEIIKTGKPYRIGGEEFVVDFLGEGHTA--DNVVVWFPKYNVLDGGCLVK 161 (219)
T ss_dssp HHHTTC---------C------CCSEECCTTSEEEETTEEEEEECCCCSSSS--SCCEEEETTTTEEEEETTSC
T ss_pred HHhcCC---------C------CCcEecCCCCEEEECCEEEEEEeCCCCCCC--CCEEEEECCCCEEEECCeee
Confidence 776310 0 0123333 4789999999999973 6887 88899986 8999999864
No 28
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.25 E-value=9.7e-06 Score=72.63 Aligned_cols=97 Identities=9% Similarity=0.043 Sum_probs=71.8
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+. +..+|||+|. |+.|+..+... ...++||+++.+.+.
T Consensus 36 ~n~~li~~-~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~----~~~~~v~~~~~~~~~ 110 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMEL----CPDAHVLCTQRAFDS 110 (398)
T ss_dssp ECCEEECS-SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHH----CTTCEEEECHHHHHH
T ss_pred EEEEEEEC-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHH----CCCCEEEEcHHHHHH
Confidence 35688885 5799999996 66777666532 135899999999888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec--cCCCcceEEEEEc--eEEEeCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
+++.++. + ....+.++ ++.+.+++.+++.++++ |.. .++++.+. +++|+||+.
T Consensus 111 l~~~~~~--------~-----~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~~~~~lf~GD~~ 168 (398)
T 1ycg_A 111 LKAHYSH--------I-----DFNYTIVKTGTSVSLGKRSLTFIEAPMLHWP--DSMFTYVPEEALLLPNDAF 168 (398)
T ss_dssp HHHHTCS--------C-----CCEEEECCTTCEEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHhCC--------C-----CcceEEeCCCCEEeeCCcEEEEEeCCCCCCC--CcEEEEECCCcEEEecccc
Confidence 8765321 1 12234454 57899999999999988 777 78888885 999999994
No 29
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.23 E-value=2.8e-06 Score=72.32 Aligned_cols=123 Identities=9% Similarity=0.040 Sum_probs=69.5
Q ss_pred CCccEEeCHHHHHHHHHhCCe--eeecCC--CCCCCcccceeEEEec--CceeEeC-CEEEEEE-EeccCCCcceEEEEE
Q 025514 80 RHIPIYVAMRDFEVMKKTHYY--LVDTSG--IIPGAAVSELQFNIID--EEPFTVQ-DLKITPL-PVWHGAGYRSLGFRF 151 (251)
Q Consensus 80 ~~l~iygp~~~~~~l~~~~~~--~~~~~~--~~~g~~~~~~~~~~i~--~~~~~~~-~~~I~~~-~v~H~~~~~s~gy~i 151 (251)
...+||+++...+.+.+.... ...... .+.....+..+++.++ ++.++++ ++++.++ | .|.. .+++|.+
T Consensus 124 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~--g~~~~~~ 200 (276)
T 2r2d_A 124 GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHAS--GMLGLAV 200 (276)
T ss_dssp SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSS--SEEEEEE
T ss_pred CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCc--eeEEEEE
Confidence 357899999888776542110 000000 0000000123455665 4678875 8999988 7 8988 8999999
Q ss_pred c-----eEEEeCCCCCCCcchhhh-hCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEcc
Q 025514 152 G-----NICYISDVSEIPEETYPF-LQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGM 214 (251)
Q Consensus 152 ~-----~i~Ys~Dt~~~~e~~~~~-~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~ 214 (251)
+ +++|+||+.+.. ..+.. ...++ +.......|.+++.+.+++++... +++..|.
T Consensus 201 ~~~~~~~vl~~GD~~~~~-~~~~~~~~~~~-------~~~d~~~~~~sl~~l~~l~~~~~~-~v~~~H~ 260 (276)
T 2r2d_A 201 RLEKQPGFLLVSDACYTA-TNYGPPARRAG-------VLHDTIGYDRTVSHIRQYAESRSL-TVLFGHD 260 (276)
T ss_dssp ECSSSCEEEEEETTSCCH-HHHSSSCCCCS-------SCSCHHHHHHHHHHHHHHHHHTTC-EEEESSC
T ss_pred EcCCCceEEEEechhhhH-HHhcccCCCCc-------cccCHHHHHHHHHHHHHHHhcCCC-EEEeCCC
Confidence 4 799999998754 22221 11111 010112245566666666554444 8999993
No 30
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.20 E-value=1.6e-05 Score=74.58 Aligned_cols=99 Identities=10% Similarity=0.083 Sum_probs=64.0
Q ss_pred ceeEeCCEEEEEEEe---ccCC---------CcceEEEEEc----eEEEeCCCCCCCcc---hhhhhCCCcEEEEcccCC
Q 025514 124 EPFTVQDLKITPLPV---WHGA---------GYRSLGFRFG----NICYISDVSEIPEE---TYPFLQDCEILIMDALRP 184 (251)
Q Consensus 124 ~~~~~~~~~I~~~~v---~H~~---------~~~s~gy~i~----~i~Ys~Dt~~~~e~---~~~~~~~~DlLi~E~~~~ 184 (251)
+.+++++++|+.++. .|+. ...+++|+|+ +++|+||+....+. +.+....+|+|++
T Consensus 152 ~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l~~~~~~~DvLkv----- 226 (547)
T 2bib_A 152 AHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKF----- 226 (547)
T ss_dssp TEEEETTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHHHHHHHHCCCSEEEC-----
T ss_pred ceEecCCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhhhhcccccceeEEEe-----
Confidence 689999999999973 3421 1478999997 89999999875321 1122347999985
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCCeEEEEccCC-CC--ChHHHHHHHHh
Q 025514 185 DRSSSTHFGLPRALEEVRKIQPKRTLFIGMMH-LM--DHEKVNEELLK 229 (251)
Q Consensus 185 ~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~-~~--~~~~l~~~l~~ 229 (251)
+|.|-+..+...+++++++++.++++.=.. ++ ++++..+++++
T Consensus 227 --~HHG~S~~s~s~~fl~~v~P~~aiiS~g~~n~~~hP~~evl~~l~~ 272 (547)
T 2bib_A 227 --NHHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKE 272 (547)
T ss_dssp --TTTTBCSSSSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHHHHHHT
T ss_pred --ccccCcccCChHHHHHhcCCcEEEEcCCcccccCCCCHHHHHHHHh
Confidence 222202233456788899999888776332 11 34556556664
No 31
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.20 E-value=5.7e-06 Score=74.27 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=72.5
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
.+|++|+ ++..+|||||. |+.|+..+.... ..++||+++.+.+.
T Consensus 35 ~n~~li~-~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~----~~~~v~~~~~~~~~ 109 (402)
T 1e5d_A 35 YNAYLVE-DEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC----QPEKIFTSSLGQKA 109 (402)
T ss_dssp EEEEEEC-SSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH----CCSEEEEEHHHHHH
T ss_pred eEEEEEE-CCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC----CCCEEEEChHHHHH
Confidence 4578898 57899999995 677776665321 25899999999888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec--cCCCcceEEEEEc--eEEEeCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
+++.++. + ....+.++ ++.+++++.+++.++++ |.. .+++|.+. +++|+||+.
T Consensus 110 ~~~~~~~--------~-----~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~~~~~l~~GD~~ 167 (402)
T 1e5d_A 110 MESHFHY--------K-----DWPVQVVKHGETLSLGKRTVTFYETRMLHWP--DSMVSWFADEKVLISNDIF 167 (402)
T ss_dssp HHHHHCC--------S-----SCCEEEECTTCEEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHhCC--------C-----CCceEEcCCCCEEEECCCEEEEEeCCCCCCC--CcEEEEECCCCEEEecccc
Confidence 8764321 0 01234454 57899999999999998 987 88888886 899999995
No 32
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=98.16 E-value=1e-05 Score=69.33 Aligned_cols=107 Identities=9% Similarity=0.075 Sum_probs=73.5
Q ss_pred heeeeeecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
.|++|+.++..+|||+|. |+.|+..+... ..++||+++...+.
T Consensus 56 n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~~ 130 (294)
T 3m8t_A 56 AVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE-----TGAQLVAGERDKPL 130 (294)
T ss_dssp CCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH-----HCCEEEEEGGGHHH
T ss_pred EEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc-----cCCEEEEChHHHHH
Confidence 469999999999999995 67777776532 25799999999888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEc--------eEEEeCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--------~i~Ys~Dt~ 161 (251)
++....+...... ... ..+....+.+. ++.+.+++.+|+.++++ |.. .+++|.++ +++|+||+.
T Consensus 131 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~~~~~~~~~~~lf~GD~~ 204 (294)
T 3m8t_A 131 LEGGYYPGDEKNE-DLA-FPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSP--GCTSWEMTVKDGKEDREVLFFCSGT 204 (294)
T ss_dssp HHHTCBTTBTTCG-GGC-CCCCCCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEECCCCC
T ss_pred HhcccccCccccc-cCC-CCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCc--cCEEEEEEccCCCccceEEEEcCcc
Confidence 8764221110000 000 00000112343 57899999999999988 877 88999886 499999996
No 33
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.16 E-value=4.1e-05 Score=65.62 Aligned_cols=153 Identities=10% Similarity=0.056 Sum_probs=91.7
Q ss_pred hheeeeeecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
..|++|+.++..+|||+|. |+.|+..+... ..++||+++.+.+
T Consensus 58 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~ 132 (303)
T 4ax1_B 58 ISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKA-----TGAPVYARAPAID 132 (303)
T ss_dssp SCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHH-----HCCCEEEEHHHHH
T ss_pred ceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhh-----cCCEEEEcHHHHH
Confidence 3569999999999999994 66777666532 2579999999988
Q ss_pred HHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEce-------EEEeCCCCCC
Q 025514 93 VMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFGN-------ICYISDVSEI 163 (251)
Q Consensus 93 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~-------i~Ys~Dt~~~ 163 (251)
.+++.................+....+.++ ++.+++++.+|+.++++ |.. .+++|.++. .++.+|+-..
T Consensus 133 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~--g~~~~~~~~~~~~~~~~~l~gD~l~~ 210 (303)
T 4ax1_B 133 TLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTP--GGTSWTWRSCEGDDCRQMVYADSLTA 210 (303)
T ss_dssp HHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEECCCCCC
T ss_pred HHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCc--cceEEEEEecCCCceeEEEEeCCccc
Confidence 887642110000000000001112234454 57899999999999877 777 888888862 3455888642
Q ss_pred CcchhhhhCCCcEEEEcccCCCCCC---CCCCCHHHHHHHHHhcCCCeEEEEccCCC
Q 025514 164 PEETYPFLQDCEILIMDALRPDRSS---STHFGLPRALEEVRKIQPKRTLFIGMMHL 217 (251)
Q Consensus 164 ~e~~~~~~~~~DlLi~E~~~~~~~~---~~H~t~~ea~~~a~~~~~k~lvltH~s~~ 217 (251)
. . .+.+. +. .+. ..=..+.++++.++..+++.++.-|-...
T Consensus 211 ~-~-------~~~~~----~~-~~~~~~~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~ 254 (303)
T 4ax1_B 211 I-S-------DDVFR----YS-DDAAHPGYLAAFRNTLARVAALDCDILVTPHPSAS 254 (303)
T ss_dssp C-C-------CSSCC----TT-CGGGSTTHHHHHHHHHHHHHTSCCSEEECSSGGGG
T ss_pred c-C-------cCccc----CC-CCCCCccHHHHHHHHHHHHhcCCCCEEEcCCcchh
Confidence 1 1 00000 00 000 00133455566667778899999997753
No 34
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.10 E-value=4.1e-05 Score=68.68 Aligned_cols=99 Identities=14% Similarity=0.038 Sum_probs=70.8
Q ss_pred hheeeeeecCcEEEEecCC----------------------------------CCCCChhhHhhhccCCCCccEEeCHHH
Q 025514 45 ILQACLQSSFSTIALFVGF----------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRD 90 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~----------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~ 90 (251)
..|++|+.++..+|||+|. |+.|+..+... ...++||+++..
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~----~p~~~v~~~~~~ 110 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRR----FPEAPIYCTEVA 110 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHH----STTCCEEECHHH
T ss_pred EEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHH----CCCCEEEECHHH
Confidence 3569998888899999994 33333333311 125889999999
Q ss_pred HHHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec--cCCCcceEEEEEc--eEEEeCCCC
Q 025514 91 FEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 91 ~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
.+.+++.++. .. ....+.++ ++.+.+++.+++.++++ |.. .+++|.+. +++|+||+.
T Consensus 111 ~~~~~~~~~~--~~----------~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~--~~~~~~~~~~~~lf~GD~~ 172 (404)
T 2ohh_A 111 VKGLLKHYPS--LR----------EAEFMTVKTGDVLDLGGKTLTFLETPLLHWP--DSMFTLLDEDGILFSNDAF 172 (404)
T ss_dssp HHHHHHHCGG--GG----------GSCEEECCTTCEEECSSCEEEEEECTTSSST--TCEEEEEETTTEEECTTTT
T ss_pred HHHHHHHhcc--cc----------cCCceEcCCCCEEEECCEEEEEEeCCCCCCC--CceEEEECCCcEEEecCcc
Confidence 8888765321 00 11234454 57889999999999998 987 88999886 899999986
No 35
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=98.08 E-value=1.9e-05 Score=66.76 Aligned_cols=108 Identities=8% Similarity=0.004 Sum_probs=72.7
Q ss_pred heeeeeecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
.|++|+.++..+|||+|. |+.|+..+... ..++||+++...+.
T Consensus 26 n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~~ 100 (263)
T 1k07_A 26 ASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQ-----TKAKYMVMDEDVSV 100 (263)
T ss_dssp CCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHH-----HCCEEEEEHHHHHH
T ss_pred EEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHh-----cCCEEEEcHHHHHH
Confidence 469999999999999995 67777766532 25789999999888
Q ss_pred HHHhCCee--eecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEc--------eEEEeCCCC
Q 025514 94 MKKTHYYL--VDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~--~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--------~i~Ys~Dt~ 161 (251)
++...... +... ......+......++ ++.+.+++.+|+.++++ |.. .+++|.++ +++|+||+.
T Consensus 101 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~--g~~~~~~~~~~~~~~~~~lf~GD~~ 176 (263)
T 1k07_A 101 ILSGGKSDFHYAND--SSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTR--GCTTWTMKLKDHGKQYQAVIIGSIG 176 (263)
T ss_dssp HHTTTTTCTTTTTC--GGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEEECCCC
T ss_pred HhcccccccccCcc--ccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCC--CcEEEEEecccCCceeEEEEECCcc
Confidence 76532110 0000 000000000123343 57899999999999887 887 88999886 499999986
Q ss_pred C
Q 025514 162 E 162 (251)
Q Consensus 162 ~ 162 (251)
.
T Consensus 177 ~ 177 (263)
T 1k07_A 177 V 177 (263)
T ss_dssp C
T ss_pred c
Confidence 5
No 36
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=98.05 E-value=5.9e-06 Score=67.43 Aligned_cols=108 Identities=10% Similarity=-0.024 Sum_probs=70.4
Q ss_pred heeeeee--cCcEEEEecCC---------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHH
Q 025514 46 LQACLQS--SFSTIALFVGF---------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKK 96 (251)
Q Consensus 46 ~~~ll~~--~~~~iLiD~G~---------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~ 96 (251)
.|++|+. ++..+|||+|. |+.|+..+... .+++||+++...+.+.+
T Consensus 14 n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~~~~~ 88 (210)
T 2xf4_A 14 NCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQH-----YGVPVIGPEKEDEFWLQ 88 (210)
T ss_dssp EEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHH-----HTCCEECCCGGGHHHHH
T ss_pred EEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHH-----cCCcEEEecchHHHHhc
Confidence 5688874 67899999996 77787776532 15789999887766644
Q ss_pred hCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEc--eEEEeCCCCC
Q 025514 97 THYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 97 ~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
.+........ .+. ..+....+.++ ++.+.+++.+|+.++++ |.. .+++|.++ +++|+||+.+
T Consensus 89 ~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~ 154 (210)
T 2xf4_A 89 GLPAQSRMFG-LDE-CQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTP--GHVVFFDEQSQLLISGDVIF 154 (210)
T ss_dssp THHHHHHHTT-CCC-CCCCCCSBCCCTTCEEEETTEEEEEEECCSSST--TCEEEEETTTTEEEEETSEE
T ss_pred cchhhhhhcC-Ccc-cCCCCCceEECCCCEEEECCeEEEEEECCCCCC--CcEEEEeCCCCEEEECCEec
Confidence 2110000000 000 00000112333 47889999999999887 666 89999996 9999999975
No 37
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=98.04 E-value=1.5e-05 Score=66.93 Aligned_cols=74 Identities=18% Similarity=0.286 Sum_probs=49.4
Q ss_pred CccEEeCHHHHHHHHHhCCeeeecCCCCCCCcccceeEEEecCceeEeCCEEEEEEEeccCCCcceEEEEEc-----eEE
Q 025514 81 HIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG-----NIC 155 (251)
Q Consensus 81 ~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~-----~i~ 155 (251)
..+||+++...+.+.....+... . ..+...+...+++....+++++...| -|.. .+++|.++ +++
T Consensus 122 ~~~i~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~i~~~~~p-GHt~--g~~~~~~~~~~~~~vl 191 (254)
T 3dha_A 122 NTPIIVQRTEYEAALHREEYMKE-C------ILPHLNYKIIEGDYEVVPGVQLLYTP-GHSP--GHQSLFIETEQSGSVL 191 (254)
T ss_dssp SSCEEEEHHHHHHHHHCTTSCGG-G------SCTTSCEEEECSSEEEETTEEEEECC-SSST--TCEEEEEEETTTEEEE
T ss_pred CCEEEECHHHHHHhhcccccccc-c------cCcccceEEecCCccccCCEEEEECC-CCCC--CCEEEEEEeCCCCEEE
Confidence 57899999998887654322211 0 01123445556656667887776655 4887 88899886 699
Q ss_pred EeCCCCCCC
Q 025514 156 YISDVSEIP 164 (251)
Q Consensus 156 Ys~Dt~~~~ 164 (251)
|+||+.+..
T Consensus 192 ~~GD~~~~~ 200 (254)
T 3dha_A 192 LTIDASYTK 200 (254)
T ss_dssp EEETTCSSH
T ss_pred EEecccchh
Confidence 999998753
No 38
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=97.86 E-value=9.6e-05 Score=62.59 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=70.7
Q ss_pred hheeeeeecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
..|++|+.++..+|||||. |+.|+..+... .+++||+++.+.+
T Consensus 38 ~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~ 112 (269)
T 1sml_A 38 LTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRR-----TGAKVAANAESAV 112 (269)
T ss_dssp BCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHH-----SSCEEEECHHHHH
T ss_pred cEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHh-----cCCeEEECHHHHH
Confidence 3469999999999999995 77777776532 2588999999988
Q ss_pred HHHHhCCe--eeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEce-------EEEeCCCC
Q 025514 93 VMKKTHYY--LVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFGN-------ICYISDVS 161 (251)
Q Consensus 93 ~l~~~~~~--~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~-------i~Ys~Dt~ 161 (251)
.+++.... .+... .+ ..+....+.++ ++.+++++++|+.++++ |.. .+++|.++. .++.||+-
T Consensus 113 ~l~~~~~~~~~~~~~---~~-~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~--g~~~~~~~~~~~~~~~~l~~gD~l 186 (269)
T 1sml_A 113 LLARGGSDDLHFGDG---IT-YPPANADRIVMDGEVITVGGIVFTAHFMAGHTP--GSTAWTWTDTRNGKPVRIAYADSL 186 (269)
T ss_dssp HHHTTTCSBTTTBTS---SC-CCCCCCSEECCTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEECCCC
T ss_pred HHhcCCccccccccc---cC-CCCCCCCeEeCCCCEEEECCEEEEEEECCCCCc--ccEEEEEecccCCceeEEEEeccc
Confidence 87653211 01000 00 00000123343 47899999999999998 777 889998751 34447985
Q ss_pred C
Q 025514 162 E 162 (251)
Q Consensus 162 ~ 162 (251)
.
T Consensus 187 ~ 187 (269)
T 1sml_A 187 S 187 (269)
T ss_dssp C
T ss_pred c
Confidence 4
No 39
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=97.82 E-value=1.3e-05 Score=66.94 Aligned_cols=103 Identities=11% Similarity=0.093 Sum_probs=69.9
Q ss_pred hhheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 44 RILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
...|++|+.++..+|||||. |+.|+..+.. ..++||+++...+
T Consensus 47 ~~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~ 120 (243)
T 4hl2_A 47 ASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHA------AGIATYANALSNQ 120 (243)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHH------TTCEEEEEHHHHH
T ss_pred cceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHh------CCCeEEECHHHHH
Confidence 34679999999999999993 7777776653 1689999999888
Q ss_pred HHHHhCCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEc--eEEEeCCCCC
Q 025514 93 VMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 93 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
.+++......... .. .+. ...+ +++.++++++++ .+..+ |.. .+++|.+. +++|+||+-.
T Consensus 121 ~~~~~~~~~~~~~--~~---~~~--~~~~~~g~~~~~g~~~v-~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~ 184 (243)
T 4hl2_A 121 LAPQEGMVAAQHS--LT---FAA--NGWVEPATAPNFGPLKV-FYPGPGHTS--DNITVGIDGTDIAFGGCLIK 184 (243)
T ss_dssp HGGGTTCCCCSEE--EC---BCT--TSBBCGGGSTTCTTEEE-ECCCSSSST--TCCEEEETTTTEEECTTTCC
T ss_pred HHhcccccccccc--cc---ccc--ceEecCCCeEEECCEEE-EeCCCCCCc--CCEEEEEcCCCEEEEcceee
Confidence 7765321110000 00 000 1122 246788899999 44444 887 88999996 8999999875
No 40
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=97.77 E-value=9.4e-05 Score=62.70 Aligned_cols=95 Identities=11% Similarity=0.025 Sum_probs=67.4
Q ss_pred heeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVM 94 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l 94 (251)
+|++|+. +..+|||+|. |+.|+..+... ....+||+++...+.+
T Consensus 44 N~yli~~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~----~~~~~v~~~~~~~~~l 118 (262)
T 3hnn_A 44 NSYVIEG-DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLEL----APQITFVCSLPAAGDL 118 (262)
T ss_dssp EEEEEES-SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHH----CTTCEEEECHHHHHHH
T ss_pred EEEEEEC-CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHH----CCCCEEEECHHHHHHH
Confidence 5788887 7899999995 55566555431 2368999999998888
Q ss_pred HHhCCeeeecCCCCCCCcccceeEEEec-CceeEeC-CEEEEEEEec--cCCCcceEEEEEc--eEEEeCCC
Q 025514 95 KKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQ-DLKITPLPVW--HGAGYRSLGFRFG--NICYISDV 160 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~-~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt 160 (251)
++.++. + ....+.++ ++.++++ +.+++.++++ |.. .++.+.+. +++|+||+
T Consensus 119 ~~~~~~--------~-----~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~--g~~~~~~~~~~~lfsGD~ 175 (262)
T 3hnn_A 119 RAAFPD--------D-----NLNILPMRGKETLDLGKGHVLKFLPIPSPRWP--AGLCTYDVQTQILYTDKI 175 (262)
T ss_dssp HHHSSS--------S-----CCEEEECCSSCEEECSTTCEEEEEECCCSSCT--TCEEEEETTTTEEEEETT
T ss_pred HHHhCC--------C-----CCceEEeCCCCEEEcCCCcEEEEEECCCCCCC--CeeEEEeCCCCEEEEeec
Confidence 764321 0 12234554 5789998 8777777766 666 67777665 89999999
No 41
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=97.77 E-value=0.00016 Score=59.44 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=70.2
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+.++..+|||+|. |+.|+..+.. ..++||+++...+.
T Consensus 27 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~------~~~~v~~~~~~~~~ 100 (223)
T 1m2x_A 27 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK------IGAKTYSTKMTDSI 100 (223)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH------TTCEEEEEHHHHHH
T ss_pred ccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh------CCCeEEEcHHHHHH
Confidence 4579999989999999994 7777766553 36899999998887
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEE-e-ccCCCcceEEEEEc--eEEEeCCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLP-V-WHGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~-v-~H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
+++... . .+ .+.++ ++.+.+++.+|+.+. . -|.. .+++|.+. +++|+||+..
T Consensus 101 ~~~~~~---~---------~~---~~~~~~g~~~~~g~~~i~~~~~~pgHt~--~~~~~~~~~~~~lf~GD~~~ 157 (223)
T 1m2x_A 101 LAKENK---P---------RA---QYTFDNNKSFKVGKSEFQVYYPGKGHTA--DNVVVWFPKEKVLVGGCIIK 157 (223)
T ss_dssp HHHTTC---C---------CC---SEEESSCEEEEETTEEEEEECCCSSSSS--SCCEEEETTTTEEEEETTSC
T ss_pred HHhcCc---c---------CC---ceecCCCceEEECCEEEEEEecCCCCCC--CCEEEEECCCCEEEEecccc
Confidence 765310 0 00 12333 467889999999983 5 5877 88999996 8999999753
No 42
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=97.71 E-value=9.3e-05 Score=63.41 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=67.6
Q ss_pred hhheeeeeecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHH
Q 025514 44 RILQACLQSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDF 91 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~ 91 (251)
..+|++|+.++..+|||+|. |+.|+..+.... .....+++|+.+...
T Consensus 31 ~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-~~~~~~~v~~~~~~~ 109 (289)
T 4ad9_A 31 GTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSI-NNDTTYCIKKLPRNP 109 (289)
T ss_dssp CCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHS-CCSSCCCEEECCCSS
T ss_pred ceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhh-ccCCCceEEecCCCc
Confidence 45679999889999999994 666776665421 112456777764321
Q ss_pred HHHHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEc--eEEEeCCCC
Q 025514 92 EVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 92 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
...... .. ....++.+. ++.+++++.+++.+.++ |.. .+++|.+. +++|+||+-
T Consensus 110 -----~~~~~~------~~---~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~--~~~~~~~~~~~~lftGD~~ 167 (289)
T 4ad9_A 110 -----QREEII------GN---GEQQYVYLKDGDVIKTEGATLRVLYTPGHTD--DHMALLLEEENAIFSGDCI 167 (289)
T ss_dssp -----CCCCCB------TT---TTBCEEECCTTCEEEETTEEEEEEECCSSST--TCEEEEETTTTEEEEETSS
T ss_pred -----chhhhc------cC---CCCceEEcCCCCEEEeCCeEEEEEECCCCCC--CCEEEEEcCCCEEEEeccc
Confidence 000000 00 122345554 57899999999999885 776 89999997 899999984
No 43
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=97.68 E-value=0.00015 Score=60.12 Aligned_cols=136 Identities=11% Similarity=0.031 Sum_probs=89.5
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+.++..+|||+|. |+.|+..+.. ..++||+++...+.
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~~~~~~~ 110 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR------KGVQSYANQMTIDL 110 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh------CCCeEEEcHHHHHH
Confidence 4579999999999999994 6777766553 26899999998887
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEE-e-ccCCCcceEEEEEc--eEEEeCCCCCCCcchh
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLP-V-WHGAGYRSLGFRFG--NICYISDVSEIPEETY 168 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~-v-~H~~~~~s~gy~i~--~i~Ys~Dt~~~~e~~~ 168 (251)
+++. + +. .+ ...++ ++.+.+++.+++.+. . .|.. .+++|.+. +++|+||+..... .
T Consensus 111 ~~~~-~--~~---------~~---~~~~~~g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~~~~-~- 171 (232)
T 1a7t_A 111 AKEK-G--LP---------VP---EHGFTDSLTVSLDGMPLQCYYLGGGHAT--DNIVVWLPTENILFGGCMLKDNQ-T- 171 (232)
T ss_dssp HHHH-T--CC---------CC---SEEESSEEEEEETTEEEEEECCCCSSST--TCCEEEETTTTEEEEETTSCCTT-C-
T ss_pred HHhc-C--CC---------CC---ceecCCCCEEEECCeEEEEEeCCCCCCC--CCEEEEECCCCEEEEcCcccccC-C-
Confidence 7653 1 00 00 12333 467889999999985 4 5877 88999996 9999999975310 0
Q ss_pred hhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhc--CCCeEEEEccCCC
Q 025514 169 PFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHL 217 (251)
Q Consensus 169 ~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~--~~k~lvltH~s~~ 217 (251)
.+.. .. .......+.++++-..+. ..+.++--|-...
T Consensus 172 ---~~~~-------~~--~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 210 (232)
T 1a7t_A 172 ---TSIG-------NI--SDADVTAWPKTLDKVKAKFPSARYVVPGHGNYG 210 (232)
T ss_dssp ---CSCC-------CC--TTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCB
T ss_pred ---cccc-------cC--CCCCHHHHHHHHHHHHhhCCCCCEEECCCCCcc
Confidence 0010 00 011234555666655555 6778888886543
No 44
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=97.63 E-value=0.00021 Score=58.13 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=65.7
Q ss_pred hheeeeeecCcEEEEecCC---------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHh
Q 025514 45 ILQACLQSSFSTIALFVGF---------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKT 97 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~---------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~ 97 (251)
.+|++|+.++..+|||+|. |+.|+..+... .+.+||+++...+.+++.
T Consensus 13 ~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~-----~~~~v~~~~~~~~~~~~~ 87 (207)
T 2zwr_A 13 ENAYLVETGEGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEA-----LDLPVYLHPLDLPLYEGA 87 (207)
T ss_dssp EEEEEEEETTEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHH-----HCCCEEECGGGHHHHHTH
T ss_pred cEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHH-----hCCcEEECHHHHHHHhCc
Confidence 3579999999999999996 78888776532 157899999998877642
Q ss_pred CCe--eeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc--eEEEeCCCCC
Q 025514 98 HYY--LVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 98 ~~~--~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
... .+... ... .+. ..+.++ ++.+. ++++...|- |.. .+++|.++ +++|+||+.+
T Consensus 88 ~~~~~~~g~~--~~~--~~~-~~~~~~~g~~i~--~~~~~~~pG-Ht~--g~~~~~~~~~~~lf~GD~~~ 147 (207)
T 2zwr_A 88 DLAARAWGLA--IPK--PPL-PVRPLEEGMRLF--GFQVLHLPG-HSP--GHVAFYDPEGAQVFSGDLLF 147 (207)
T ss_dssp HHHHHHTTCC--CCC--CCS-CCEECCTTCEET--TEEEEECCS-SST--TCEEEEETTTTEEEEETSEE
T ss_pred hhhhhhcCCC--CCc--CCC-CceEeCCCCEEE--EEEEEeCCC-CCC--CcEEEEECCCCEEEEecccC
Confidence 100 00000 000 000 112333 34444 555555443 887 89999996 9999999965
No 45
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=97.62 E-value=0.0003 Score=60.76 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=70.3
Q ss_pred heeeeee--cCcEEEEecC------------C---------------------------CCCCChhhHhhhccCCCCccE
Q 025514 46 LQACLQS--SFSTIALFVG------------F---------------------------LPMGLDDLRDWTNNVQRHIPI 84 (251)
Q Consensus 46 ~~~ll~~--~~~~iLiD~G------------~---------------------------Hi~GL~~l~~~~~~~~~~l~i 84 (251)
.||+|.. ++..+|||+| . |+.|+..|.... ..+|
T Consensus 18 ~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~a~i 92 (298)
T 4efz_A 18 ISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRV-----GGEI 92 (298)
T ss_dssp EEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHHH-----CCEE
T ss_pred EEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHHh-----CCcE
Confidence 4688865 5679999999 1 888888876431 4778
Q ss_pred EeCHHHHHHHHH---hCCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEce------
Q 025514 85 YVAMRDFEVMKK---THYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFGN------ 153 (251)
Q Consensus 85 ygp~~~~~~l~~---~~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~------ 153 (251)
|.++...+.++. .++. ... +.. ....+. +.+ +++.+.+++++|+.+.++ |.. .+++|.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~--~~~--~~~-~~~~~~-~~~~~g~~l~~g~~~i~vi~tPGHT~--g~~~~~~~~~~~~~~ 164 (298)
T 4efz_A 93 AIGRHVTRVQDVFGKLFNA--GPA--FAH-DGSQFD-RLLDDGDTLALGALSIRAMHTPGHTP--ACMTYVVTEAHAAHD 164 (298)
T ss_dssp EEETTHHHHHHHHHHHTTC--CTT--SCS-SSTTSS-EEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEETTCCGG
T ss_pred EEChhHHHHHHHHHHhcCC--ccc--ccc-cccCCC-EEeCCCCEEEECCEEEEEEECCCCCc--ccEEEEECCCccccc
Confidence 888776554432 2211 000 000 000122 233 458899999999999998 777 899999983
Q ss_pred ----EEEeCCCCCC
Q 025514 154 ----ICYISDVSEI 163 (251)
Q Consensus 154 ----i~Ys~Dt~~~ 163 (251)
++|+||+-..
T Consensus 165 ~~~~~lftGD~l~~ 178 (298)
T 4efz_A 165 ARDAAAFVGDTLFM 178 (298)
T ss_dssp GCBCEEECCSSBCC
T ss_pred CCceEEEEcCcccc
Confidence 9999999654
No 46
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=97.57 E-value=0.00016 Score=61.29 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=48.5
Q ss_pred eEEEecCceeEeCC-EEEEEEEeccCCCcceEEEEEc-----eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCC
Q 025514 117 QFNIIDEEPFTVQD-LKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSST 190 (251)
Q Consensus 117 ~~~~i~~~~~~~~~-~~I~~~~v~H~~~~~s~gy~i~-----~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~ 190 (251)
++..+++ .+++++ +++...|- |.. .+++|.++ +++|+||+.+.. ..+....-. . +.......
T Consensus 163 ~~~~~~~-~~~l~g~~~v~~~pG-Ht~--g~~~~~~~~~~~~~~lf~GD~~~~~-~~~~~~~~~------~-~~~d~~~~ 230 (274)
T 3aj3_A 163 TFEGIDG-DVDLARGVKLISTPG-HSI--GHYSLLVEFPRRKPILFTIDAAYTQ-KSLETLCQA------A-FHIDPVAG 230 (274)
T ss_dssp CEEEECS-SEEEETTEEEEECTT-SST--TCEEEEECCSSSCCEEEEETTCSSH-HHHHHTCCC------S-CCSCHHHH
T ss_pred CceEcCC-ccccCCEEEEEECCC-CCc--eeeEEEEECCCCCEEEEEechhhhH-HHhcCCCCC------c-eecCHHHH
Confidence 3445543 466777 66655553 988 88999994 899999998754 232211000 0 00001123
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEccC
Q 025514 191 HFGLPRALEEVRKIQPKRTLFIGMM 215 (251)
Q Consensus 191 H~t~~ea~~~a~~~~~k~lvltH~s 215 (251)
+.+.+.+.++..+.++ +++..|..
T Consensus 231 ~~sl~~l~~l~~~~~~-~i~pgH~~ 254 (274)
T 3aj3_A 231 VNSMRKVKKLAEDHGA-ELMYSHDM 254 (274)
T ss_dssp HHHHHHHHHHHHHHTC-EEEESSCH
T ss_pred HHHHHHHHHHHhcCCC-EEEecCCH
Confidence 4445555555554455 78888844
No 47
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=97.55 E-value=0.00022 Score=58.83 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=68.7
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+.++..+|||+|. |+.|+..+... .++||+++...+.
T Consensus 41 ~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~~~~~~~ 114 (227)
T 1mqo_A 41 SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER------GIKAHSTALTAEL 114 (227)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH------TCEEECBHHHHHH
T ss_pred ceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC------CcEEEeccchHHH
Confidence 3579999999999999996 66777665521 5889999988776
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEE-Ee-ccCCCcceEEEEEc--eEEEeCCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPL-PV-WHGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~-~v-~H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
++.. ++ .. . ...+. ++.+.+++++|+.+ +. -|.. .+++|.+. +++|+||+..
T Consensus 115 ~~~~-~~--~~----------~--~~~~~~~~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~ 171 (227)
T 1mqo_A 115 AKKN-GY--EE----------P--LGDLQTVTNLKFGNMKVETFYPGKGHTE--DNIVVWLPQYNILVGGCLVK 171 (227)
T ss_dssp HHHT-TC--CC----------C--CCCBCSEEEEEETTEEEEEECCCCSSSS--SCCEEEETTTTEEEEETTSC
T ss_pred HHhc-CC--CC----------C--ccccCCCCeeeECCEEEEEEecCCCCCC--CCEEEEECCCCEEEEeeeee
Confidence 6542 11 00 0 11222 35788899999987 44 5887 88999997 8999999864
No 48
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=97.53 E-value=0.00017 Score=61.13 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=64.3
Q ss_pred heeeeeec--CcEEEEecCC--------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHh
Q 025514 46 LQACLQSS--FSTIALFVGF--------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKT 97 (251)
Q Consensus 46 ~~~ll~~~--~~~iLiD~G~--------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~ 97 (251)
.||+|..+ +..+|||+|. |+.|+..+.... +.+||+++...+.+
T Consensus 13 ~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~v~~~~~~~~~~--- 84 (254)
T 1xm8_A 13 YAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-----GAKVIGSAMDKDRI--- 84 (254)
T ss_dssp EEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH-----CCEEEEEGGGGGGS---
T ss_pred EEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHc-----CCeEEEchhhhhcC---
Confidence 46888765 5689999996 777777765321 47788887643211
Q ss_pred CCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEc--eEEEeCCCCC
Q 025514 98 HYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
++ . .+.+ +++.+.+++.+++.+.++ |.. .+++|.+. .++|+||+..
T Consensus 85 -----------~~-----~-~~~~~~g~~~~lg~~~~~vi~tPGHt~--g~~~~~~~~~~~lftGD~l~ 134 (254)
T 1xm8_A 85 -----------PG-----I-DMALKDGDKWMFAGHEVHVMDTPGHTK--GHISLYFPGSRAIFTGDTMF 134 (254)
T ss_dssp -----------TT-----E-EEEECTTCEEEETTEEEEEEECCSSSS--SCEEEEEGGGTEEEEETTEE
T ss_pred -----------CC-----C-ceeeCCCCEEEECCEEEEEEECCCCCC--CcEEEEECCCCEEEEcCccc
Confidence 11 1 1223 357889999999998876 777 89999996 8999999964
No 49
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=97.52 E-value=5.1e-05 Score=62.67 Aligned_cols=126 Identities=14% Similarity=0.090 Sum_probs=69.0
Q ss_pred ceeeeeeccccCCCCCCChhhhheeeeeecCcEEEEecCC--------------------------------CCCCChhh
Q 025514 24 QISVYTSQISLPTSGFFPFKRILQACLQSSFSTIALFVGF--------------------------------LPMGLDDL 71 (251)
Q Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~~iLiD~G~--------------------------------Hi~GL~~l 71 (251)
=++.|+.+...... ........|++|+.++..+|||||. |+.|+..+
T Consensus 15 ~~~~~~~g~~~~p~-~~~~~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~ 93 (221)
T 1ztc_A 15 LKILVTGGNVFVPG-RLNAHFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLF 93 (221)
T ss_dssp EEEEECCBEEEETT-TEECCBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGC
T ss_pred EEEEEecceEEecC-CCCCCceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhC
Confidence 34455544443332 3333456789999999999999994 34444322
Q ss_pred HhhhccCCCCccEEeCHHHHHHHHHhCCeeeecC-CCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEE
Q 025514 72 RDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTS-GIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGF 149 (251)
Q Consensus 72 ~~~~~~~~~~l~iygp~~~~~~l~~~~~~~~~~~-~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy 149 (251)
. ..+||+++.. +++.+....... ..+........+++.++ ++.+..+++++...| -|.. .+++|
T Consensus 94 ~--------~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~--g~~~~ 159 (221)
T 1ztc_A 94 E--------NATFYVHEVY---KTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAR--EHLSF 159 (221)
T ss_dssp T--------TCEEEEEGGG---GGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEETTTTEEEEECC-SSST--TCEEE
T ss_pred C--------CCEEEEeHHH---hhhhhhhhccchhhhhhhccccccceEEeCCCCEEECCeEEEEEcC-CCCc--ccEEE
Confidence 1 4688888762 111110000000 00000000001234454 344543477777776 6887 89999
Q ss_pred EEc-----eEEEeCCCCCCC
Q 025514 150 RFG-----NICYISDVSEIP 164 (251)
Q Consensus 150 ~i~-----~i~Ys~Dt~~~~ 164 (251)
.++ +++|+||+.+..
T Consensus 160 ~~~~~~~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 160 LLDTENAGRVLITGDITPNR 179 (221)
T ss_dssp EEEETTTEEEEECGGGSCSH
T ss_pred EEEcCCCCeEEEEeCccccc
Confidence 996 699999998653
No 50
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=97.51 E-value=0.00062 Score=58.61 Aligned_cols=108 Identities=12% Similarity=-0.024 Sum_probs=70.2
Q ss_pred heeee-eecCcEEEEecCC--------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 46 LQACL-QSSFSTIALFVGF--------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 46 ~~~ll-~~~~~~iLiD~G~--------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
.|++| ..++..+|||+|. |+.|+..+... ....+||+++...+
T Consensus 25 n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~----~~~a~v~~~~~~~~ 100 (303)
T 2vw8_A 25 PVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPR----LPNVQVLASERTCQ 100 (303)
T ss_dssp CEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGG----CTTCEEEEEHHHHH
T ss_pred eEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHh----CCCCeEEECHHHHH
Confidence 46899 4788999999995 67777665531 13588999998876
Q ss_pred HHHHh--------C----CeeeecCCCCCCCcccceeEEEec-CceeEeCC-EEEEEEEec-cCCCcceEEEEEc--eEE
Q 025514 93 VMKKT--------H----YYLVDTSGIIPGAAVSELQFNIID-EEPFTVQD-LKITPLPVW-HGAGYRSLGFRFG--NIC 155 (251)
Q Consensus 93 ~l~~~--------~----~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~-~~I~~~~v~-H~~~~~s~gy~i~--~i~ 155 (251)
.+.+. + ...+.... ... ....+.++.++ ++.+++++ .+++.+.++ |.. .+++|.+. +++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~--g~~~~~~~~~~~l 176 (303)
T 2vw8_A 101 AWKSESAVRVVERLNRQLLRAEQRLP-EAC-AWDALPVRAVADGEWLELGPRHRLQVIEAHGHSD--DHVVFYDVRRRRL 176 (303)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCCCC-CCC-CGGGSCEEEECTTCEEEEETTEEEEEEECTTSST--TCEEEEETTTTEE
T ss_pred HHhccchhhHHHHHHHHHHHhhcccc-ccc-CCCCCCceEcCCCCEEecCCCeEEEEEECCCCCc--ccEEEEECCCCEE
Confidence 55321 0 00000000 000 01123345554 47888887 888888876 877 88999996 999
Q ss_pred EeCCCC
Q 025514 156 YISDVS 161 (251)
Q Consensus 156 Ys~Dt~ 161 (251)
|+||+-
T Consensus 177 f~GD~~ 182 (303)
T 2vw8_A 177 FCGDAL 182 (303)
T ss_dssp EEETTT
T ss_pred EEcCcc
Confidence 999995
No 51
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=97.46 E-value=0.00047 Score=62.03 Aligned_cols=97 Identities=12% Similarity=-0.018 Sum_probs=69.7
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
..|++|+. +..+|||+|. |+.|+..+... -...+||+++.+.+.
T Consensus 41 ~n~~li~~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~----~~~~~v~~~~~~~~~ 115 (414)
T 2q9u_A 41 YNSYFIDD-ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK----FTNATFVCTKKCQEH 115 (414)
T ss_dssp ECCEEECS-SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG----STTCEEEECHHHHHH
T ss_pred eeEEEEEC-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH----CCCCEEEECHHHHHH
Confidence 35688885 7899999995 77777666532 136899999999888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec--cCCCcceEEEEEc--eEEEeCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
+++.++. + ....+.++ ++.+++++.+++.++++ |.. .++.+.+. +++|+||..
T Consensus 116 ~~~~~~~--------~-----~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~--~~~~~~~~~~~~lf~GD~~ 173 (414)
T 2q9u_A 116 LKILYGM--------E-----KATWLIVDDKYTLKIGKRTLKFIPVPLLHWP--DSTFTYCPEDKILFSNDGF 173 (414)
T ss_dssp HHHHHCC--------T-----TCCEEECCTTCCEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHhCC--------C-----CCeeEEeCCCCEEEECCeEEEEEeCCCCCCC--CceEEEECCCeEEEEcccc
Confidence 7764221 0 01234444 57889999999999887 876 67777665 899999974
No 52
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=97.40 E-value=0.0002 Score=61.94 Aligned_cols=110 Identities=10% Similarity=-0.028 Sum_probs=70.3
Q ss_pred hhheeeeeecCcEEEEecCC----------------------------------CCCCChhhHhhhccCCCCccEEeCHH
Q 025514 44 RILQACLQSSFSTIALFVGF----------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMR 89 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~----------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~ 89 (251)
..+|++|+.++..+|||+|. |+.|+..+.. . ..+||+++.
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~-----~-~~~v~~~~~ 94 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEG-----L-GARVFLHEE 94 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHH-----T-TCEEEEEGG
T ss_pred cEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHh-----C-CCEEEEcHH
Confidence 45679999888999999996 5555554442 2 678999988
Q ss_pred HHHHHHHhCCe----------eeecCCCCCCC---------------cccceeEEEec-CceeEeCCEEEEEEEec-cCC
Q 025514 90 DFEVMKKTHYY----------LVDTSGIIPGA---------------AVSELQFNIID-EEPFTVQDLKITPLPVW-HGA 142 (251)
Q Consensus 90 ~~~~l~~~~~~----------~~~~~~~~~g~---------------~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~ 142 (251)
..+.++..... .+... ..+.. ..+....+.++ ++.+.+++.+++.+.++ |..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~ 173 (317)
T 2zo4_A 95 EFARGHRFWREPEAFAEASWRLFLDH-GTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHAD 173 (317)
T ss_dssp GTTTHHHHHHCTTTSHHHHHHHHHHT-TCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSST
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHc-CCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCCc
Confidence 76655431100 00000 00000 00001223443 57899999999999987 877
Q ss_pred CcceEEEEEc--eEEEeCCCCC
Q 025514 143 GYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 143 ~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
..++|.+. +++|+||+..
T Consensus 174 --g~~~~~~~~~~~lf~GD~~~ 193 (317)
T 2zo4_A 174 --GHAAFYLEEEGVLLAGDALL 193 (317)
T ss_dssp --TCEEEEETTTTEEEEETSCC
T ss_pred --ccEEEEeCCCCEEEECCEec
Confidence 88888885 8999999974
No 53
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=97.36 E-value=0.00017 Score=66.43 Aligned_cols=96 Identities=10% Similarity=0.085 Sum_probs=67.1
Q ss_pred hheeee--eecCcEEEEecCC---------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHH
Q 025514 45 ILQACL--QSSFSTIALFVGF---------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMK 95 (251)
Q Consensus 45 ~~~~ll--~~~~~~iLiD~G~---------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~ 95 (251)
..|++| +.++..+|||+|. |+.|+..|... ...+||+++...+.+.
T Consensus 16 ~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~-----~~~~i~~~~~~~~~~~ 90 (474)
T 3tp9_A 16 HASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADR-----AGAAICVSDEGPPEWK 90 (474)
T ss_dssp EEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHH-----HCCEEEEECCSCGGGC
T ss_pred eEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHH-----HCCcEEEcCcchhhhc
Confidence 356899 6778999999995 88888877643 1577887765432211
Q ss_pred HhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec-cCCCcceEEEEEc---------eEEEeCCCC
Q 025514 96 KTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG---------NICYISDVS 161 (251)
Q Consensus 96 ~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~---------~i~Ys~Dt~ 161 (251)
. .+ .+....+.+. ++.+.+++++|+.+.++ |.. .+++|.+. +++|+||+-
T Consensus 91 ~----~~----------~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~--g~~~~~~~~~~~~~~~~~~lftGD~l 151 (474)
T 3tp9_A 91 S----EY----------VKAYPHRLLKDGDELHFGNVRIVVMHTPGHTP--EHVSYLLYDGKTSPDVPMALFSGDFV 151 (474)
T ss_dssp C----GG----------GGGSSEEEECTTCEEEETTEEEEEEECCSSSS--SCEEEEEEETTTEEEEEEEEEEETSE
T ss_pred c----cc----------cccccceECCCCCEEEECCEEEEEEECCCCCC--CCEEEEEecCCCCCCCceEEEeCCcc
Confidence 1 00 0011123443 57899999999999998 777 89999985 399999996
No 54
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=97.35 E-value=0.0013 Score=53.98 Aligned_cols=151 Identities=9% Similarity=0.039 Sum_probs=88.8
Q ss_pred heeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVM 94 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l 94 (251)
+|++|..++..+|||+|. |+.|+..+.. ...+||+++.+.+.+
T Consensus 27 n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~~~~~~~~ 100 (233)
T 3q6v_A 27 NSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT------LGAKIVATQMTYDLQ 100 (233)
T ss_dssp EEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHHHHHHH
T ss_pred cEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh------CCCEEEEcHHHHHHH
Confidence 579999989999999995 7778777652 358899999988877
Q ss_pred HHhCCee---eec-CCCCCCCcccceeEEEecC-ceeEeCCEEEEEEEeccCCCcceEEEEEc--eEEEeCCCCCCCcch
Q 025514 95 KKTHYYL---VDT-SGIIPGAAVSELQFNIIDE-EPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEIPEET 167 (251)
Q Consensus 95 ~~~~~~~---~~~-~~~~~g~~~~~~~~~~i~~-~~~~~~~~~I~~~~v~H~~~~~s~gy~i~--~i~Ys~Dt~~~~e~~ 167 (251)
++..... ... ...+++... ......+++ ..+..+++++...+--|.. .++.+.+. +++| ||+-... .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~v~~~~pGHt~--g~~~~~~~~~~~lf-gD~~~~~-~~ 175 (233)
T 3q6v_A 101 KSQWGSIVNFTRQGNNKYPNLEK-SLPDTVFPGDFNLQNGSIRAMYLGEAHTK--DGIFVYFPAERVLY-GNCILKE-NL 175 (233)
T ss_dssp HHHHHHHHHHHHHHSTTCCCCCC-CCCSEEESSCEEETTTTEEEECCCCSSSS--SCCEEEETTTTEEE-CTTTSCS-SC
T ss_pred HhhhHHHHHHHhccccccccccc-cCCCEEeCCCeEEcCceEEEEECCCCCCc--CcEEEEeccCCEEE-Cceeccc-cC
Confidence 6521100 000 000011000 000112322 3344456666555446887 77888886 7888 9986432 11
Q ss_pred hhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhc------CCCeEEEEccCCCCChHHH
Q 025514 168 YPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI------QPKRTLFIGMMHLMDHEKV 223 (251)
Q Consensus 168 ~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~------~~k~lvltH~s~~~~~~~l 223 (251)
..+ .......+.++++.+++. +++.++-.|-.+-...+.+
T Consensus 176 -~~~---------------~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~~~~i 221 (233)
T 3q6v_A 176 -GNM---------------SFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHDVGLI 221 (233)
T ss_dssp -CCC---------------TTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEECTHHH
T ss_pred -CCC---------------CcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCCHHHH
Confidence 100 112456677777777777 8889988886553333444
No 55
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=97.31 E-value=0.001 Score=60.30 Aligned_cols=97 Identities=8% Similarity=-0.056 Sum_probs=70.8
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
++||||..++..+|||+|. |++|++.++.-. ...++||+++...+.
T Consensus 52 yNsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~---~~~~~v~~s~~~~~~ 128 (410)
T 4dik_A 52 YNAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTI---GHDVEIIASNFGKRL 128 (410)
T ss_dssp EEEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHH---CSCCEEEECHHHHHH
T ss_pred EEEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHc---CCCCEEEeCHHHHHH
Confidence 4689998888999999995 777877765321 346899999998888
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEec--cCCCcceEEEEEceEEEeCCCC
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFGNICYISDVS 161 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~~i~Ys~Dt~ 161 (251)
+++.++. ..++.+. ++.+++|+.+++.++++ |.. .++-+..+.++|++|.-
T Consensus 129 l~~~~~~---------------~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p--~~~~~y~~~iLFsgD~f 182 (410)
T 4dik_A 129 LEGFYGI---------------KDVTVVKDGEEREIGGKKFKFVMTPWLHWP--DTMVTYLDGILFSCDVG 182 (410)
T ss_dssp HHHHHCC---------------CCEEECCTTCEEEETTEEEEEEECTTSSST--TCEEEEETTEEEEETTT
T ss_pred HHhhcCc---------------cceeEecCCCEEeecceEEEEecCCCCCCC--CCeeEEeCCceEccccc
Confidence 7764221 0123443 58899999999888776 665 55555567999999973
No 56
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=97.27 E-value=0.0005 Score=56.72 Aligned_cols=134 Identities=15% Similarity=0.083 Sum_probs=83.5
Q ss_pred hhheeeeeecCcEEEEecCC------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 44 RILQACLQSSFSTIALFVGF------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
...|++|+.++..+|||+|. |+.|+..+.. ...+||+++...+.
T Consensus 32 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~~ 105 (228)
T 1jjt_A 32 PKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNS------RSIPTYASELTNEL 105 (228)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHH------TTCCEEEEHHHHHH
T ss_pred cceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHh------CCCEEEEChHHHHH
Confidence 34679999988999999994 6667665542 25789999998887
Q ss_pred HHHhCCeeeecCCCCCCCcccceeEEEecCceeEeCCEEEEEE-Ee-ccCCCcceEEEEEc--eEEEeCCCCCCCcchhh
Q 025514 94 MKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPL-PV-WHGAGYRSLGFRFG--NICYISDVSEIPEETYP 169 (251)
Q Consensus 94 l~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~I~~~-~v-~H~~~~~s~gy~i~--~i~Ys~Dt~~~~e~~~~ 169 (251)
+++.... . + . ..+++..+.+++.+++.+ ++ -|.. .+++|.+. +++|+||+.. +.. ..
T Consensus 106 ~~~~~~~-~------~-----~---~~~~g~~~~l~~~~i~~~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~-~~~-~~ 166 (228)
T 1jjt_A 106 LKKDGKV-Q------A-----T---NSFSGVNYWLVKNKIEVFYPGPGHTP--DNVVVWLPERKILFGGCFIK-PYG-LG 166 (228)
T ss_dssp HHHTTCC-C------C-----S---EEECSSCCEEETTTEEEECCCCSSST--TCCEEEETTTTEEEEETTCC-TTC-CC
T ss_pred HHhcCCc-C------c-----c---ccccCcceEecCceEEEEecCCCCCC--CcEEEEECCCcEEEEecccc-ccc-cC
Confidence 7652110 0 0 0 112344555666666665 44 4877 88899885 8999999874 211 10
Q ss_pred hhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhc--CCCeEEEEccCCC
Q 025514 170 FLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHL 217 (251)
Q Consensus 170 ~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~--~~k~lvltH~s~~ 217 (251)
.+ . ...-..+.++++-.++. +.+.++.-|-...
T Consensus 167 ~~------------~---~~d~~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 201 (228)
T 1jjt_A 167 NL------------G---DANIEAWPKSAKLLKSKYGKAKLVVPSHSEVG 201 (228)
T ss_dssp CC------------T---TCCTTTHHHHHHHHHHHTTTCSEEEESSSCCB
T ss_pred cc------------C---ccCHHHHHHHHHHHHhhcCCCCEEEcCCCCcC
Confidence 00 0 11123455555555555 6778888886543
No 57
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00077 Score=56.65 Aligned_cols=90 Identities=10% Similarity=0.046 Sum_probs=63.9
Q ss_pred hheeeeeec----CcEEEEecCC----------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 45 ILQACLQSS----FSTIALFVGF----------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 45 ~~~~ll~~~----~~~iLiD~G~----------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
..|++|+.+ +..+|||+|. |+.|+..|... ....+||+++....
T Consensus 15 ~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~----~~~~~v~~~~~~~~ 90 (245)
T 2gcu_A 15 TFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTK----LPGVKSVISKASGS 90 (245)
T ss_dssp EEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHH----STTCEEEEEGGGCC
T ss_pred eEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHh----CCCCeEEecccccc
Confidence 346889874 6899999995 77777766531 12467787765310
Q ss_pred HHHHhCCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEc--------eEEEeCCCCC
Q 025514 93 VMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYISDVSE 162 (251)
Q Consensus 93 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~--------~i~Ys~Dt~~ 162 (251)
.. .+.+ +++.+++++.+|+.+.++ |.. .+++|.++ +++|+||+..
T Consensus 91 -----------~~------------~~~~~~g~~~~~g~~~i~v~~tpGHt~--g~~~~~~~~~~~~~~~~~lftGD~~~ 145 (245)
T 2gcu_A 91 -----------KA------------DLFLEPGDKVSIGDIYLEVRATPGHTA--GCVTYVTGEGADQPQPRMAFTGDAVL 145 (245)
T ss_dssp -----------CC------------SEEECTTCEEEETTEEEEEEECCSSST--TCEEEEECCSTTSCSSCEEEEETTSB
T ss_pred -----------cC------------CEEcCCCCEEEECCEEEEEEECCCCCC--CCEEEEECCccccccccEEEECCccc
Confidence 00 1223 357899999999999886 877 89999996 3999999975
Q ss_pred C
Q 025514 163 I 163 (251)
Q Consensus 163 ~ 163 (251)
.
T Consensus 146 ~ 146 (245)
T 2gcu_A 146 I 146 (245)
T ss_dssp T
T ss_pred c
Confidence 3
No 58
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=97.21 E-value=0.001 Score=56.34 Aligned_cols=89 Identities=13% Similarity=0.096 Sum_probs=63.1
Q ss_pred heeeeee-cCcEEEEecCC--------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHhC
Q 025514 46 LQACLQS-SFSTIALFVGF--------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTH 98 (251)
Q Consensus 46 ~~~ll~~-~~~~iLiD~G~--------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~ 98 (251)
.|++|.. ++..+|||+|. |+.|+..+.... ...+||+++... +
T Consensus 20 ~~yli~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~----~~~~v~~~~~~~------~ 89 (258)
T 2qed_A 20 YIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHF----PQMTVYGPAETQ------D 89 (258)
T ss_dssp EEEEEECTTSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHC----TTCEEEECGGGG------G
T ss_pred EEEEEEECCCcEEEEeCCCcHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHC----CCCEEEeccccc------C
Confidence 4688877 57899999996 777777665321 137889887541 0
Q ss_pred CeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEceEEEeCCCCC
Q 025514 99 YYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFGNICYISDVSE 162 (251)
Q Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~i~Ys~Dt~~ 162 (251)
++ . .+.+ +++.+++++.+++.+.++ |.. .+++|.-++++|+||+..
T Consensus 90 ----------~~-----~-~~~~~~g~~~~~g~~~~~vi~tPGHt~--g~~~~~~~~~lftGD~l~ 137 (258)
T 2qed_A 90 ----------KG-----A-THLVGDGDTIRVLGEKFTLFATPGHTL--GHVCYFSRPYLFCGDTLF 137 (258)
T ss_dssp ----------GT-----C-SEECCTTCEEEETTEEEEEEECCSSST--TCEEEEETTEEEEETTEE
T ss_pred ----------CC-----C-cEEeCCCCEEEECCcEEEEEECCCCCC--CCeEEEcCCEEEECCCCC
Confidence 00 0 1223 357889999999999886 877 888888449999999964
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=97.19 E-value=0.00033 Score=64.55 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=66.5
Q ss_pred hheeee--eecCcEEEEecCC---------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHH
Q 025514 45 ILQACL--QSSFSTIALFVGF---------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMK 95 (251)
Q Consensus 45 ~~~~ll--~~~~~~iLiD~G~---------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~ 95 (251)
..|++| +.++..+|||+|. |+.|+..|.... ..+||+++...+.
T Consensus 37 ~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~a~v~~~~~~~~~-- 109 (466)
T 3r2u_A 37 QASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL-----NANIYVSGESDDT-- 109 (466)
T ss_dssp EEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH-----CCEEEEECCSCTT--
T ss_pred ceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhh-----CCeEEECcchhhh--
Confidence 356888 4567899999995 888887776431 5778887653211
Q ss_pred HhCCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEEce---------EEEeCCCCC
Q 025514 96 KTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFGN---------ICYISDVSE 162 (251)
Q Consensus 96 ~~~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i~~---------i~Ys~Dt~~ 162 (251)
+.+.+ .+. ..+.+ +++.+++++++|+.+.++ |.. .+++|.+.. ++|+||+-+
T Consensus 110 --~~~~~----------~~~-~~~~~~~g~~l~~g~~~l~vi~tPGHT~--g~~~~~~~~~~~~~~~~~~lftGD~lf 172 (466)
T 3r2u_A 110 --LGYKN----------MPN-HTHFVQHNDDIYVGNIKLKVLHTPGHTP--ESISFLLTDEGAGAQVPMGLFSGDFIF 172 (466)
T ss_dssp --TSCCS----------CCT-TCEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEECGGGTCCSCCEEEEETTBC
T ss_pred --hcccc----------CCC-CCEEeCCCCEEEECCEEEEEEECCCCCC--CCEEEEEcCCCccCCCceEEEECCccc
Confidence 11100 001 12344 357899999999999998 877 899999972 999999964
No 60
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=97.17 E-value=0.0012 Score=55.98 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=61.4
Q ss_pred heeeeeec--CcEEEEecCC--------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHh
Q 025514 46 LQACLQSS--FSTIALFVGF--------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKT 97 (251)
Q Consensus 46 ~~~ll~~~--~~~iLiD~G~--------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~ 97 (251)
.|++|..+ +..+|||+|. |+.|+..|.... ...+||+++..
T Consensus 13 ~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~----~~~~v~~~~~~------- 81 (260)
T 1qh5_A 13 YMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLE----SGLKVYGGDDR------- 81 (260)
T ss_dssp EEEEEEETTTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHS----TTCEEEESCTT-------
T ss_pred EEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHC----CCCEEEECccc-------
Confidence 36888774 5799999996 677776665321 24778887521
Q ss_pred CCeeeecCCCCCCCcccceeEEEe-cCceeEeCCEEEEEEEec-cCCCcceEEEEE-----c--eEEEeCCCCC
Q 025514 98 HYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRF-----G--NICYISDVSE 162 (251)
Q Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i-----~--~i~Ys~Dt~~ 162 (251)
+ ++ . ...+ +++.+++++.+++.+.++ |.. .+++|.+ . .++|+||+..
T Consensus 82 ~----------~~-----~-~~~~~~g~~~~~g~~~~~vi~tPGHt~--g~~~~~~~~~~~~~~~~lftGD~l~ 137 (260)
T 1qh5_A 82 I----------GA-----L-THKITHLSTLQVGSLNVKCLATPCHTS--GHICYFVSKPGGSEPPAVFTGDTLF 137 (260)
T ss_dssp S----------TT-----C-SEECCTTCEEEETTEEEEEEECCSSST--TCEEEEEECSSSSSCCEEEEETTEE
T ss_pred C----------CC-----C-CEEeCCCCEEEECCEEEEEEECCCCCC--CCEEEEEeccCCCCCCEEEEcCccc
Confidence 0 11 0 1122 357889999999999886 777 8999999 3 8999999954
No 61
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=97.14 E-value=0.00079 Score=55.87 Aligned_cols=144 Identities=6% Similarity=-0.083 Sum_probs=87.4
Q ss_pred heeeeeecC-cEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 46 LQACLQSSF-STIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 46 ~~~ll~~~~-~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
.|++|..++ ..+|||+|. |++|+..+.. ...+||+++...+.
T Consensus 31 n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~~ 104 (246)
T 2fhx_A 31 NVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK------MGAETWSSDLTKQL 104 (246)
T ss_dssp EEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH------TTCEEEEEHHHHHH
T ss_pred CEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhh------cCCEEEEcHHHHHH
Confidence 568887664 689999995 6677665542 25799999998877
Q ss_pred HHHhCCe-------eeecC-----C-CCCCCcccceeEEEec-CceeEeCCEEEEEEE-ec-cCCCcceEEEEEc--eEE
Q 025514 94 MKKTHYY-------LVDTS-----G-IIPGAAVSELQFNIID-EEPFTVQDLKITPLP-VW-HGAGYRSLGFRFG--NIC 155 (251)
Q Consensus 94 l~~~~~~-------~~~~~-----~-~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~-v~-H~~~~~s~gy~i~--~i~ 155 (251)
++..... .+... . .... .+.-.+..+. ++.+++++.+++.+. .+ |.. .+++|.+. +++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~--g~~~~~~~~~~~l 180 (246)
T 2fhx_A 105 RLEENKKDRIKAAEFYKNEDLKRRILSSHP--VPADNVFDLKQGKVFSFSNELVEVSFPGPAHSP--DNVVVYFPKKKLL 180 (246)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHTCC--CCCSEEECTTTCEEEEETTEEEEEECCCCSSST--TCCEEEETTTTEE
T ss_pred HHhcchhhhHHHHhhhccccchhhhccccc--CCCCceeecCCCCEEEECCEEEEEEeCCCCCCC--CCEEEEEcCCCEE
Confidence 6542100 00000 0 0000 0011222343 467889999999883 54 887 88899996 899
Q ss_pred EeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEccCC
Q 025514 156 YISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMH 216 (251)
Q Consensus 156 Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~ 216 (251)
|+||+-.. . ... + +. ...-..+.++++-+.+.+++.++.-|-.+
T Consensus 181 f~GD~~~~-~-~~~-----~-------~~---~~~~~~~~~sl~~l~~l~~~~i~pgHg~~ 224 (246)
T 2fhx_A 181 FGGCMIKP-K-ELG-----Y-------LG---DANVKAWPDSARRLKKFDAKIVIPGHGEW 224 (246)
T ss_dssp EEETTCCS-S-CCC-----C-------CT---TCCTTTHHHHHHHGGGSCCSEEEESBSCC
T ss_pred EECCEecc-C-CCC-----C-------CC---CCCHHHHHHHHHHHHhCCCCEEECCCCCc
Confidence 99999752 1 110 0 01 11223455556555666788888888654
No 62
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=97.07 E-value=0.0011 Score=56.09 Aligned_cols=100 Identities=8% Similarity=0.046 Sum_probs=68.0
Q ss_pred hhheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHH
Q 025514 44 RILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFE 92 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~ 92 (251)
..+|++|+.++..+|||+|. |+.|+..+.. ...+||+++...+
T Consensus 67 ~~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~------~~a~v~~~~~~~~ 140 (265)
T 2y8b_A 67 SSNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA------AGVATYTSPLTRQ 140 (265)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHH------TTCEEEECHHHHH
T ss_pred cceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhh------CCCeEEECHHHHH
Confidence 35679999999999999994 6666655442 2678999999988
Q ss_pred HHHHhCCeeeecCCCCCCCcccceeEEEe-c-CceeEeCCEEEEEEEeccCCCcceEEEEEc--eEEEeCCCCCC
Q 025514 93 VMKKTHYYLVDTSGIIPGAAVSELQFNII-D-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEI 163 (251)
Q Consensus 93 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~i-~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~--~i~Ys~Dt~~~ 163 (251)
.+++..... + ...+..+ + ++.+.++++++....--|.. .+++|.++ +++|+||+-..
T Consensus 141 ~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~g~~~v~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~~ 201 (265)
T 2y8b_A 141 LAEAAGNEV-------P-----AHSLKALSSSGDVVRFGPVEVFYPGAAHSG--DNLVVYVPAVRVLFGGCAVHE 201 (265)
T ss_dssp HHHHTTCCC-------C-----SEECSSCSSTTEEEEETTEEEEECCSSSST--TCCEEEETTTTEEEEETTSCC
T ss_pred HHHhccccc-------c-----cccccccCCCCcEEeecCEEEEecCCCCCC--CCEEEEecCCCEEEEcccccc
Confidence 776532110 0 0011111 2 35677888888533335887 88999996 89999999753
No 63
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=96.72 E-value=0.00062 Score=58.26 Aligned_cols=51 Identities=12% Similarity=0.185 Sum_probs=41.5
Q ss_pred CHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEecc
Q 025514 193 GLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 250 (251)
Q Consensus 193 t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l~ 250 (251)
.++++++.+++.++++++++|++....+..+++++++ ++..++||++|+++
T Consensus 216 ~l~~tl~~l~~~~~~~i~~~HCTg~~a~~~L~~~lp~-------~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 216 EIEKIVKAFNELGVETVVPCHCTGERAVDIFKREFLG-------KIMDCYAGLKLEVS 266 (267)
T ss_dssp HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHCSS-------EECCCCTTCEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHCCC-------CEEEecCceEEEeC
Confidence 3567888899999999999999986666666655543 79999999999875
No 64
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=96.67 E-value=0.007 Score=52.59 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=33.8
Q ss_pred cCceeEeCCEEEEEEEec-cCCCcceEEEEE-------c-eEEEeCCCCCC
Q 025514 122 DEEPFTVQDLKITPLPVW-HGAGYRSLGFRF-------G-NICYISDVSEI 163 (251)
Q Consensus 122 ~~~~~~~~~~~I~~~~v~-H~~~~~s~gy~i-------~-~i~Ys~Dt~~~ 163 (251)
+++.+.+++.+|+.+.++ |.. .+++|.+ + +++|+||+.+.
T Consensus 136 ~g~~l~lg~~~l~vi~tPGHT~--g~i~~~~~~~~~~~~~~~lftGD~l~~ 184 (311)
T 2p18_A 136 EGDRVQVGDLSVEVIDAPCHTR--GHVLYKVQHPQHPNDGVALFTGDTMFI 184 (311)
T ss_dssp TTCEEEETTEEEEEEECCSSST--TCEEEEEECTTCGGGCEEEEEETTEET
T ss_pred CCCEEEECCeEEEEEECCCCCc--ccEEEEEecCCcCCcCCEEEEcCcccc
Confidence 357899999999999985 877 8999999 5 79999999653
No 65
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=96.61 E-value=0.013 Score=47.61 Aligned_cols=145 Identities=15% Similarity=0.080 Sum_probs=81.6
Q ss_pred hheeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHH
Q 025514 45 ILQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEV 93 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~ 93 (251)
.+|++|+.++..+|||+|. |+.|+..+.. ...+||+++...+.
T Consensus 23 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~~ 96 (227)
T 3iog_A 23 ENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS------IGAKVVSTRQTRDL 96 (227)
T ss_dssp EEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHHHHHH
T ss_pred CcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh------CCCeEEECHHHHHH
Confidence 3579999989999999995 6777766552 36889999998887
Q ss_pred HHHhCCeeee----cCCCCCCCcccceeEEEecCceeEeCCEEEEEEEe--ccCCCcceEEEEEc--eEEEeCCCCCCCc
Q 025514 94 MKKTHYYLVD----TSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV--WHGAGYRSLGFRFG--NICYISDVSEIPE 165 (251)
Q Consensus 94 l~~~~~~~~~----~~~~~~g~~~~~~~~~~i~~~~~~~~~~~I~~~~v--~H~~~~~s~gy~i~--~i~Ys~Dt~~~~e 165 (251)
+++....... ....++.... .......++ .+++++.+++.+.+ -|.. .++.+.+. +++| ||+-.. .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~l~~~~~~~~~~~pGHt~--g~~~~~~~~~~~lf-gd~l~~-~ 170 (227)
T 3iog_A 97 MKSDWAEIVAFTRKGLPEYPDLPL-VLPNVVHDG-DFTLQEGKVRAFYAGPAHTP--DGIFVYFPDEQVLY-GGCILK-E 170 (227)
T ss_dssp HHHHHHHHHHHHHHHCTTSCCCCC-CCCSEEESS-CEEETTTTEEEECCCCSSSS--SCCEEEETTTTEEE-CGGGSC-S
T ss_pred HHHhhHHHHHHhhcCCCCCCCccc-cCCCEeecC-eEEEcCcEEEEEecCCCCCC--CcEEEEecCCCEEE-cccccc-c
Confidence 7642110000 0000011000 000112233 46776656666654 5887 78888886 7888 886432 1
Q ss_pred chhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHH--hcCCCeEEEEccCCC
Q 025514 166 ETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVR--KIQPKRTLFIGMMHL 217 (251)
Q Consensus 166 ~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~--~~~~k~lvltH~s~~ 217 (251)
.. . +. ....-..+.++++-++ ...++.++-.|-.+-
T Consensus 171 ~~-~---~~------------~~~~~~~~~~sl~~l~~~~l~~~~i~pgHg~~~ 208 (227)
T 3iog_A 171 KL-G---NL------------SFADVKAYPQTLERLKAMKLPIKTVIGGHDSPL 208 (227)
T ss_dssp SC-C---CC------------TTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCE
T ss_pred CC-C---Cc------------CcCCHHHHHHHHHHHHhccCCCCEEEeCCCCCc
Confidence 11 0 00 0112233444455444 356888888886553
No 66
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=96.57 E-value=0.0018 Score=55.03 Aligned_cols=111 Identities=10% Similarity=0.054 Sum_probs=61.9
Q ss_pred hhheeeeeecCcEEEEecCC----------------------------------------------CCCCChhhHhhhcc
Q 025514 44 RILQACLQSSFSTIALFVGF----------------------------------------------LPMGLDDLRDWTNN 77 (251)
Q Consensus 44 ~~~~~ll~~~~~~iLiD~G~----------------------------------------------Hi~GL~~l~~~~~~ 77 (251)
...|++|+.++..+|||||. |+.|+..+..- .
T Consensus 47 ~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~--~ 124 (280)
T 3esh_A 47 PTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGH--A 124 (280)
T ss_dssp ECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSC--C
T ss_pred eEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccc--c
Confidence 34679999999999999993 33333332210 0
Q ss_pred CCCCccEEeCHHHHHHHHHhCCeeeecCCCCCCCc-ccceeEEEecCceeEe-CCEEEEEEEec-cCCCcceEEEEEc--
Q 025514 78 VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAA-VSELQFNIIDEEPFTV-QDLKITPLPVW-HGAGYRSLGFRFG-- 152 (251)
Q Consensus 78 ~~~~l~iygp~~~~~~l~~~~~~~~~~~~~~~g~~-~~~~~~~~i~~~~~~~-~~~~I~~~~v~-H~~~~~s~gy~i~-- 152 (251)
.-...+||+++...+.+........... ..... ...-.++.+++ ..++ +++++ ++++ |.. .+++|.++
T Consensus 125 ~fp~a~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~l~~gi~~--~~~pGHt~--g~~~~~i~~~ 197 (280)
T 3esh_A 125 IFENAIHVVQQDEWHEFIAPNIRSKSTY--WDKNKGDYSNKLILFEK-HFEPVPGIKM--QHSGGHSF--GHTIITIESQ 197 (280)
T ss_dssp SSTTCEEEEEHHHHHHHHSCCTTGGGTS--CGGGCCGGGGGEEEESS-EECSSTTEEE--EECCSSST--TCEEEEEEET
T ss_pred CCCCCEEEECHHHHHHhhCcccccccch--hhhhhhhhhheEEEeCC-CCeEcCCEEE--EEcCCCCc--ccEEEEEEEC
Confidence 1136889999998887754210000000 00000 00112333332 2222 35555 5555 766 78999995
Q ss_pred --eEEEeCCCCCC
Q 025514 153 --NICYISDVSEI 163 (251)
Q Consensus 153 --~i~Ys~Dt~~~ 163 (251)
+++|+||+.+.
T Consensus 198 ~~~vlftGD~~~~ 210 (280)
T 3esh_A 198 GDKAVHMGDIFPT 210 (280)
T ss_dssp TEEEEECGGGSCS
T ss_pred CcEEEEEEccCCc
Confidence 79999999864
No 67
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=96.55 E-value=0.0021 Score=52.00 Aligned_cols=92 Identities=10% Similarity=-0.039 Sum_probs=58.0
Q ss_pred hheeeeeecCcEEEEecCC------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHHHHhCCe
Q 025514 45 ILQACLQSSFSTIALFVGF------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYY 100 (251)
Q Consensus 45 ~~~~ll~~~~~~iLiD~G~------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l~~~~~~ 100 (251)
..|++|+.++..+|||+|. |+.|+..+... .+.+||+++...+.++.
T Consensus 24 ~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g~i~~ii~TH~DH~gg~~~~~~~-----~~a~v~~~~~~~~~~~~---- 94 (201)
T 2p97_A 24 FNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNSDHVRSAKEIADQ-----TYTKIAGPVAEKENFPI---- 94 (201)
T ss_dssp EEEEEECCTTCCEEESCCCCCHHHHHHHHHTTCCSEEECSSGGGCTTHHHHHHH-----SCCEEEEEGGGTTSCSS----
T ss_pred eeEEEEEeCCeeEEEECCCCcHHHHHHHHhcCCCCEEEECCchhhhhHHHHHHh-----cCCEEEEcHhHhhhhcc----
Confidence 4579998888999999993 44454444321 24677777654322110
Q ss_pred eeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc-eEEEeCCCCCC
Q 025514 101 LVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG-NICYISDVSEI 163 (251)
Q Consensus 101 ~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~-~i~Ys~Dt~~~ 163 (251)
+ . ...++ ++.+. .++++...|.-|.. .+++|.++ +++|+||+...
T Consensus 95 --------~-----~--~~~~~~g~~~~-~~~~~~~~p~gHt~--g~~~~~~~~~~lf~GD~~~~ 141 (201)
T 2p97_A 95 --------Y-----C--DRWLSDGDELV-PGLKVMELQGSKTP--GELALLLEETTLITGDLVRA 141 (201)
T ss_dssp --------C-----C--SEEECTTCBSS-TTEEEEEECSSSST--TEEEEEETTTEEEECSSEEB
T ss_pred --------c-----C--ceecCCCCEEc-ceEEEEECCCCCCC--CcEEEEEcCCEEEECccccc
Confidence 0 0 12222 33342 26777666666988 89999998 79999999653
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=96.12 E-value=0.0036 Score=53.12 Aligned_cols=102 Identities=10% Similarity=0.072 Sum_probs=61.7
Q ss_pred heeeeeecCcEEEEecCC-------------------------------CCCCChhhHhhhccCCCCccEEeCHHHHHHH
Q 025514 46 LQACLQSSFSTIALFVGF-------------------------------LPMGLDDLRDWTNNVQRHIPIYVAMRDFEVM 94 (251)
Q Consensus 46 ~~~ll~~~~~~iLiD~G~-------------------------------Hi~GL~~l~~~~~~~~~~l~iygp~~~~~~l 94 (251)
+|++|..+++.+|||+|. |+.|+..|.. ..+++|+.+.+.+.+
T Consensus 76 N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~------~~~~v~~~~~~~~~~ 149 (270)
T 4eyb_A 76 NGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHA------AGIATYANALSNQLA 149 (270)
T ss_dssp EEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHH------TTCEEEEEHHHHHHG
T ss_pred EEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHH------CCCeEEECHHHHHHH
Confidence 579999999999999995 7777666552 368999999888777
Q ss_pred HHhCCeeeecCCCCCCCcccceeEEEec-CceeEeCCEEEEEEEeccCCCcceEEEEEc--eEEEeCCCCC
Q 025514 95 KKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~I~~~~v~H~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
++......... .. ... ...++ ...+..+++++....--|.. ..+.+.+. +++++||+-.
T Consensus 150 ~~~~~~~~~~~--~~--~~~---~~~~~~~~~~~~g~~~~~~~~pgHT~--g~~~~~~~~~~vLfsGD~l~ 211 (270)
T 4eyb_A 150 PQEGMVAAQHS--LT--FAA---NGWVEPATAPNFGPLKVFYPGPGHTS--DNITVGIDGTDIAFGGCLIK 211 (270)
T ss_dssp GGGTCCCCSEE--EC--BCT---TSBBCGGGSTTCTTEEEECCCSSSSS--SCCEEEETTSSEEECTTTCC
T ss_pred HhcCccccccc--cC--CCC---ceeecCceeeecCceeEEecccccCC--CCEEEEecCCcEEEEeCeec
Confidence 65311100000 00 000 00111 23445566665443345666 55666665 8999999853
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=95.74 E-value=0.022 Score=54.70 Aligned_cols=38 Identities=5% Similarity=0.029 Sum_probs=31.6
Q ss_pred CceeEeCCEEEEEEEec-c-CCCcceEEEEEc--eEEEeCCCCC
Q 025514 123 EEPFTVQDLKITPLPVW-H-GAGYRSLGFRFG--NICYISDVSE 162 (251)
Q Consensus 123 ~~~~~~~~~~I~~~~v~-H-~~~~~s~gy~i~--~i~Ys~Dt~~ 162 (251)
++.+.++|.+++.+.++ | .. ..+.|.+. +++++||+-.
T Consensus 261 G~~l~lgg~~l~vi~tPGHhTp--g~i~~~~p~~~vLftGD~v~ 302 (658)
T 2cfu_A 261 GEDLVLDGVPFTFQNTPGTESP--AEMNIWLPRQKALLMAENVV 302 (658)
T ss_dssp EEEEEETTEEEEEEECTTSSSS--SBEEEEETTTTEEECTTTSC
T ss_pred ceEEEECCEEEEEEeCCCCCCC--CcEEEEECCCCEEEEecccc
Confidence 46788999999998888 5 66 77888886 8999999864
No 70
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=95.64 E-value=0.011 Score=51.69 Aligned_cols=68 Identities=10% Similarity=0.094 Sum_probs=39.9
Q ss_pred EEEEEec-cCCCcceEEEEEc----eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhc---
Q 025514 133 ITPLPVW-HGAGYRSLGFRFG----NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--- 204 (251)
Q Consensus 133 I~~~~v~-H~~~~~s~gy~i~----~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~--- 204 (251)
|+.++++ |.. .+++|.++ +++|+||+.+.+ .+ . +...|+ ....+.+..++.+..+++
T Consensus 226 i~vi~tpGHtp--G~~~~~i~~~~~~vlf~GD~~~~~-~~-~-~~~p~~----------~~~~d~d~~~~~~s~~~ll~~ 290 (331)
T 1p9e_A 226 IKALASHGHTP--GHTTYVVESQGQKLALLGDLILVA-AV-Q-FDDPSV----------TTQLDSDSKSVAVERKKAFAD 290 (331)
T ss_dssp EEEEECTTSST--TCEEEEEEETTEEEEECTTSCCCH-HH-H-TTCTTC----------CBTTCSSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCh--hCEEEEEEECCcEEEEEECccCcc-hh-c-ccCCCc----------eecccCCHHHHHHHHHHHHHH
Confidence 4444554 777 78999996 899999998753 21 1 112222 112345666665554432
Q ss_pred ---CCCeEEEEccC
Q 025514 205 ---QPKRTLFIGMM 215 (251)
Q Consensus 205 ---~~k~lvltH~s 215 (251)
....++..|..
T Consensus 291 ~~~~~~~v~~~H~~ 304 (331)
T 1p9e_A 291 AAKGGYLIAASHLS 304 (331)
T ss_dssp HHHHTCEEECTTSS
T ss_pred HhcCCCEEEEECCC
Confidence 24567888864
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=92.13 E-value=0.018 Score=55.37 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=29.3
Q ss_pred CceeEeCCEEEEEEEec--cCCCcceEEEEEc--eEEEeCCCC
Q 025514 123 EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 161 (251)
Q Consensus 123 ~~~~~~~~~~I~~~~v~--H~~~~~s~gy~i~--~i~Ys~Dt~ 161 (251)
++.+.++|.+++.+.++ |.. ..+.+.+. +++++||+-
T Consensus 272 g~~l~lgg~~l~vi~tPG~Htp--g~i~~~~p~~~vLftGD~~ 312 (668)
T 2yhe_A 272 YERHTVDGVELEFQLTLGSEAP--SDMNIYLPQFKVLNTADNA 312 (668)
Confidence 46788899888888777 777 67777775 799999984
No 72
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=79.38 E-value=1.8 Score=39.19 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=43.3
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcC---CCcEEEeecCeEEeccC
Q 025514 188 SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETE---GLDVQLSYDGLRVPVML 251 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~---~~~v~~A~DG~~i~l~~ 251 (251)
-.+|.+.++..++++..++++++++|=.+.. -..+++.+.+.+... +.++.+..-|.+++|.+
T Consensus 393 ~S~Had~~~l~~~i~~~~p~~v~~vHGe~~~-~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~ 458 (459)
T 2i7t_A 393 FSAHTDYQQTSEFIRALKPPHVILVHGEQNE-MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNF 458 (459)
T ss_dssp CSCCCCHHHHHHHHHHHCCSEEEEESSCHHH-HHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEE
T ss_pred ecccCCHHHHHHHHHhcCCCeEEEeCCCHHH-HHHHHHHHHHHhccccccCceEEeCCCCCEEEEEe
Confidence 3689999999999999999999999932211 233444444422100 24678888899888753
No 73
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=75.73 E-value=2.3 Score=40.38 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=42.2
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 188 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~--~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
-.+|.+.++..++++.++ +|+++++|=..+. ...+.+.+.+ +.|.++.+..+|.+++|
T Consensus 576 ~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~~-~~~~a~~~~~---~~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 576 FSGHSDRRQLMEYVKRISPKPEKILLCHGDNYK-TLDLASSIYR---TYRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSSCCHHHHHHHHHSCSSCCSEEEEESSCHHH-HHHHHHHHHH---HHCCEEECCCTTCEEEC
T ss_pred cceeCCHHHHHHHHHHhccCCCEEEEECCCHHH-HHHHHHHHHH---HcCCcEEeCCCCCEEEe
Confidence 569999999999999999 9999999922111 1234444432 23457888999999886
No 74
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=75.09 E-value=2.5 Score=40.24 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 188 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~--~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
-.+|.+.++..++++.++ +++++++|=.++. ...+.+.+.+ ..+.++.+..+|.+++|
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~-~~~la~~~~~---~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVHGEPQK-CLDLATSIHR---KFGISTRAPNNLDTIRL 650 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEESSCHHH-HHHHHHHHHH---HHCCEEECCCTTCEEEC
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHHH-HHHHHHHHHH---hcCCeEEECCCCCEEEe
Confidence 469999999999999999 9999999922211 1234444432 23457888999999886
No 75
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=75.04 E-value=2.9 Score=39.74 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=42.3
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 188 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~--~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
-.+|.+.+|..++++.++ +++++++|=.++. ...+.+.+.+ +.|.++.+...|.+++|
T Consensus 580 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~-~~~~a~~~~~---~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 580 FSGHSDRRQLMEYVKRMQPRPERVFTEHGDEKA-CVDLASSVYK---KLKIETRALTNLETVRL 639 (640)
T ss_dssp CSCSCCHHHHHHHHHTCBSCCSEEEEESSCHHH-HHHHHHHHHH---HHCCEEEECCTTCEEEC
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEEECCCHHH-HHHHHHHHHH---HcCCeEEeCCCCCEEEe
Confidence 469999999999999998 9999999922111 2234444432 23457889999999886
No 76
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=72.86 E-value=3.4 Score=38.49 Aligned_cols=59 Identities=8% Similarity=-0.131 Sum_probs=41.2
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCC---cEEEeecCeEEecc
Q 025514 187 SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGL---DVQLSYDGLRVPVM 250 (251)
Q Consensus 187 ~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~---~v~~A~DG~~i~l~ 250 (251)
...+|.+.+|..++++..++|+++++|=..+. ...+.+.+++ .|. ++.+..+|++++|.
T Consensus 379 ~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~-~~~~~~~~~~----~g~~~~~~~~~~~G~~~~l~ 440 (562)
T 3bk2_A 379 HASGHASQEELKLILNLTTPRFFLPWHGEVRH-QMNFKWLAES----MSRPPEKTLIGENGAVYRLT 440 (562)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEEESBCHHH-HHHHHHHHHT----SSSCCSEECCCCTTEEEEEC
T ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHH-HHHHHHHHHH----cCCCcceEEECCCCCEEEEe
Confidence 35799999999999999999999999922211 1222322222 222 57788999998874
No 77
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=68.09 E-value=5.3 Score=37.22 Aligned_cols=59 Identities=19% Similarity=0.096 Sum_probs=40.5
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCC---cEEEeecCeEEecc
Q 025514 187 SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGL---DVQLSYDGLRVPVM 250 (251)
Q Consensus 187 ~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~---~v~~A~DG~~i~l~ 250 (251)
...||.+.+|...+.+..++|.++.+|=..+. .....+.+.+ .|. ++.+.++|++++|+
T Consensus 364 h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~-~~~~~~~a~~----~G~~~~~~~~~~nG~~~~l~ 425 (555)
T 3zq4_A 364 HTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRM-QKMHVKLATD----CGIPEENCFIMDNGEVLALK 425 (555)
T ss_dssp CCCSSCCHHHHHHHHHHSCEEEEEEESBCHHH-HHHHHHHHHH----TTCCGGGBCCCCTTCEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHH-HHHHHHHHHH----cCCCcccEEEccCCCEEEEe
Confidence 34799999999999999999999999922111 1122222222 222 57888999988773
No 78
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=65.74 E-value=5.1 Score=35.59 Aligned_cols=51 Identities=16% Similarity=0.028 Sum_probs=39.0
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 188 SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
-.+|.+.+|..++++..++|+++.+|=..+ .+.+ ..+.++.+.++|++++|
T Consensus 379 ~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~----~~~~-------~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 379 CSGHAIPEDLDKIIALIEPQVLVPIHTLKP----EKLE-------NPYGERILPERGEQIVL 429 (429)
T ss_dssp CCSSCCHHHHHHHHHHHCCSEEEEESCSCG----GGCC-------CTTSEECCCCTTCEEEC
T ss_pred ecCCCCHHHHHHHHHhhCCCEEEECCCCch----hhhh-------cCCCcEEEeCCCcEEeC
Confidence 479999999999999999999999994322 1211 12347889999999875
No 79
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=55.49 E-value=2.2 Score=36.05 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=23.1
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEE----EccCCCCChHHHHH
Q 025514 189 STHFGLPRALEEVRKIQPKRTLF----IGMMHLMDHEKVNE 225 (251)
Q Consensus 189 ~~H~t~~ea~~~a~~~~~k~lvl----tH~s~~~~~~~l~~ 225 (251)
=+|..+.-.++.|++.--+++.. +|+...- .+.+++
T Consensus 180 CsH~GI~Niv~~a~~~~g~~i~~viGGfHL~~~~-~~~l~~ 219 (267)
T 3h3e_A 180 CSHRGIDNILLDIAETFNERIKMVVGGFHLLKSS-DDEIEK 219 (267)
T ss_dssp CCTTCHHHHHHHHHTTCSSCEEEEEEECCCTTSC-HHHHHH
T ss_pred CCCcCHHHHHHHHHHHhCCCceEEEeccccCCCC-HHHHHH
Confidence 46999999999888863255543 5776543 344443
No 80
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=52.86 E-value=34 Score=23.05 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=33.9
Q ss_pred HHHHHHHHHhcCCCeEEEEccCCCC-ChHHHHHHHHhhhhcCC-CcEEEeecCeEEec
Q 025514 194 LPRALEEVRKIQPKRTLFIGMMHLM-DHEKVNEELLKLMETEG-LDVQLSYDGLRVPV 249 (251)
Q Consensus 194 ~~ea~~~a~~~~~k~lvltH~s~~~-~~~~l~~~l~~~~~~~~-~~v~~A~DG~~i~l 249 (251)
..+..+..++-++||+-+.-....- ..+.....+-..++..| ..+.+..||..+.+
T Consensus 33 lnelmdyikkqgakrvrisitartkkeaekfaailikvfaelgyndinvtfdgdtvtv 90 (106)
T 1qys_A 33 LNELMDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDGDTVTV 90 (106)
T ss_dssp HHHHHHHHHHHCCSEEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEETTEEEE
T ss_pred HHHHHHHHHhcCCcEEEEEEEecchhHHHHHHHHHHHHHHHhCCcceeEEEcCCeEEE
Confidence 4567788889999988765433221 12334443333333333 46888899998865
No 81
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=39.79 E-value=17 Score=26.04 Aligned_cols=26 Identities=8% Similarity=0.215 Sum_probs=20.5
Q ss_pred CCCCCCCcchhhhhCCCcEEEEcccC
Q 025514 158 SDVSEIPEETYPFLQDCEILIMDALR 183 (251)
Q Consensus 158 ~Dt~~~~e~~~~~~~~~DlLi~E~~~ 183 (251)
||-..++-+..+.+++||+++.+.++
T Consensus 16 Gd~~~lT~~a~~~L~~advv~~~~~~ 41 (117)
T 3hh1_A 16 GNLDDMTFRAVNTLRNAGAIACEDTR 41 (117)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEESCHH
T ss_pred CCHHHhhHHHHHHHHhCCEEEEecCc
Confidence 46666777888999999999997643
No 82
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=39.15 E-value=27 Score=30.49 Aligned_cols=42 Identities=10% Similarity=0.065 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEccCCCCC-hHHHHHHHHhh
Q 025514 189 STHFGLPRALEEVRKIQPKRTLFIGMMHLMD-HEKVNEELLKL 230 (251)
Q Consensus 189 ~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~-~~~l~~~l~~~ 230 (251)
..|+++.|..++++.+++++++-||-..... .+.|++.+++|
T Consensus 319 SeHss~~EL~~fv~~l~p~~iiptv~~~~~~~~~~m~~~~~~w 361 (367)
T 4b87_A 319 SEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREW 361 (367)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEECSSCSSHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCCeEECeecCCCHHHHHHHHHHHHHH
Confidence 4699999999999999999999999554321 23455555554
No 83
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=37.69 E-value=60 Score=25.11 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=37.2
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCCC--CCCCCCHHHHHHHHHhcCCCeEEEEc
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDRS--SSTHFGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~--~~~H~t~~ea~~~a~~~~~k~lvltH 213 (251)
++.+|..-.++.+.+.++++|++|+-+...... ...-......++.+++.++++++++=
T Consensus 45 ~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S 105 (219)
T 3dqp_A 45 AVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLS 105 (219)
T ss_dssp EEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEecccCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEEC
Confidence 455776531346778889999999988765321 11112244566677778888876654
No 84
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=34.85 E-value=37 Score=30.15 Aligned_cols=55 Identities=22% Similarity=0.148 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEec
Q 025514 188 SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 249 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~l 249 (251)
-.+|.+-+|..++++..+ +++|+|=.+.. -+.+++.+.+ +. .++.+.+-|.++++
T Consensus 377 ~saHad~~~l~~~~~~~~--~v~lvHge~~~-~~~l~~~l~~---~~-~~~~~p~~~~~~~~ 431 (431)
T 3iek_A 377 FSGHAGQDELLDWLQGEP--RVVLVHGEEEK-LLALGKLLAL---RG-QEVSLARFGEGVPV 431 (431)
T ss_dssp GCSSCCHHHHHHHHTTCS--EEEEESSCHHH-HHHHHHHHHH---TT-CEEEECCTTCCEEC
T ss_pred ccccCCHHHHHHHHHhCC--eEEEECCCHHH-HHHHHHHHHH---hC-CcEEECCCCCEEeC
Confidence 368999999999998765 89999932211 2344555554 22 37888888888764
No 85
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=34.40 E-value=18 Score=29.57 Aligned_cols=59 Identities=10% Similarity=0.040 Sum_probs=36.7
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEcc
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGM 214 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~ 214 (251)
++.+|-.- ++.+.+.++++|.+|+-+.........-.....+++.+++.++++++++-.
T Consensus 48 ~~~~D~~d-~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 48 VRQLDYFN-QESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EEECCTTC-HHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEcCCCC-HHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 44577654 356778889999999977543210000011245666778888988877654
No 86
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.13 E-value=95 Score=24.23 Aligned_cols=57 Identities=12% Similarity=0.200 Sum_probs=36.5
Q ss_pred EEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCC------CCCCCHHHHHHHHHhcCCCeEEEEc
Q 025514 154 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSS------STHFGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~------~~H~t~~ea~~~a~~~~~k~lvltH 213 (251)
-++.+|.. +++.+.++++|++|+-+....... ..-.......+.+++.+.++++++=
T Consensus 68 ~~~~~Dl~---~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S 130 (236)
T 3e8x_A 68 DIVVANLE---EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVS 130 (236)
T ss_dssp EEEECCTT---SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eEEEcccH---HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEe
Confidence 45667766 568888899999999887543211 0111233455666777888887754
No 87
>3sft_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; modified doubly-wound/fold, chemoreceptor; 2.15A {Thermotoga maritima}
Probab=30.56 E-value=47 Score=26.36 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=27.0
Q ss_pred CCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEe
Q 025514 205 QPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVP 248 (251)
Q Consensus 205 ~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~ 248 (251)
.+--++.-|+++.+ ...+.+.|.+. ...+|..|+||+.++
T Consensus 34 ~~~ivivQHm~~~f-~~~la~~L~~~---~~l~V~ea~dg~~l~ 73 (193)
T 3sft_A 34 PAPIVVVQHMPPGF-TKSLAMRLDST---SELTVKEAEDGEEVK 73 (193)
T ss_dssp SSCEEEEECCCTTC-HHHHHHHHHHH---CSSEEEECCTTCBCC
T ss_pred CCeEEEEECCCCCc-HHHHHHHHhcc---CCCcEEEeCCCCEec
Confidence 34578889999988 44555555542 234788888888764
No 88
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=30.23 E-value=1.5e+02 Score=22.37 Aligned_cols=26 Identities=0% Similarity=0.120 Sum_probs=20.6
Q ss_pred CHHHHHHHHHhcCCCeEEEE---ccCCCC
Q 025514 193 GLPRALEEVRKIQPKRTLFI---GMMHLM 218 (251)
Q Consensus 193 t~~ea~~~a~~~~~k~lvlt---H~s~~~ 218 (251)
..++...++++.+++++++. |+|...
T Consensus 60 av~eI~~~a~kv~~~~ivlYPyAHLSs~L 88 (143)
T 2hl0_A 60 AIEEISKVAEQVKAENVFVYPFAHLSSEL 88 (143)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECGGGCSSB
T ss_pred HHHHHHHHHHhcCCCEEEEeccccccCcc
Confidence 35677888999999999997 666655
No 89
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.24 E-value=55 Score=25.39 Aligned_cols=53 Identities=8% Similarity=0.226 Sum_probs=36.8
Q ss_pred EEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEc
Q 025514 154 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH 213 (251)
.++.+|..- ++++.+.++++|++|+-+...+- . ...+++.+++.+.+++|++-
T Consensus 55 ~~~~~D~~d-~~~~~~~~~~~d~vv~~ag~~n~----~--~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 55 TVIEGSFQN-PGXLEQAVTNAEVVFVGAMESGS----D--MASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp EEEECCTTC-HHHHHHHHTTCSEEEESCCCCHH----H--HHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECCCCC-HHHHHHHHcCCCEEEEcCCCCCh----h--HHHHHHHHHhcCCCeEEEEe
Confidence 345677754 35677888999999998864310 1 66677777888888887654
No 90
>1chd_A CHEB methylesterase; chemotaxis protein, serine hydrolase, carboxyl methylesteras; 1.75A {Salmonella typhimurium} SCOP: c.40.1.1
Probab=26.43 E-value=85 Score=25.05 Aligned_cols=50 Identities=20% Similarity=0.112 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCC---eEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeEEe
Q 025514 195 PRALEEVRKIQPK---RTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVP 248 (251)
Q Consensus 195 ~ea~~~a~~~~~k---~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~i~ 248 (251)
+...+++..+-.. -++.-|+++.+ ...+.+.|.+. ....|..|+||+.++
T Consensus 23 ~AL~~~l~~LP~~~~~ivivQHm~~~f-~~~la~~L~~~---~~l~V~ea~dg~~l~ 75 (203)
T 1chd_A 23 EAIRHVLQPLPLSSPAVIITQHMPPGF-TRSFAERLNKL---CQISVKEAEDGERVL 75 (203)
T ss_dssp HHHHHHHTTCCTTSCEEEEEECCCTTH-HHHHHHHHHHH---CSSEEEECCTTCBCC
T ss_pred HHHHHHHHhCCCCCCeEEEEECCCCch-HHHHHHHHcCc---CCCcEEECCCCCEec
Confidence 3344455554221 67888998877 44455555542 234788888888764
No 91
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=25.63 E-value=58 Score=25.70 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=37.2
Q ss_pred EEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEcc
Q 025514 154 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGM 214 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~ 214 (251)
.++.+|..- ++.+.+.++++|++|+-+.... .......+++.+++.+.+++|++--
T Consensus 70 ~~~~~Dl~d-~~~~~~~~~~~D~vv~~a~~~~----~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 70 QIIMGDVLN-HAALKQAMQGQDIVYANLTGED----LDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp EEEECCTTC-HHHHHHHHTTCSEEEEECCSTT----HHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEecCCC-HHHHHHHhcCCCEEEEcCCCCc----hhHHHHHHHHHHHHcCCCEEEEEec
Confidence 345678764 3567788899999998775321 0112345677777888888877653
No 92
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=24.37 E-value=1.4e+02 Score=24.36 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=37.7
Q ss_pred EEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCC---CC---CCHHHHHHHHHhcCCCeEEEEc
Q 025514 154 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSS---TH---FGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 154 i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~---~H---~t~~ea~~~a~~~~~k~lvltH 213 (251)
-++.+|.. ++.+.+.++++|++|+=+........ .. .....+++.+++.++++++++=
T Consensus 45 ~~~~~Dl~--~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 45 EYRVSDYT--LEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS 108 (311)
T ss_dssp EEEECCCC--HHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEcccc--HHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 34568877 46788889999999998765432110 00 1124556677788898877654
No 93
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=23.63 E-value=1e+02 Score=24.59 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=34.5
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEcc
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGM 214 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~ 214 (251)
++.+|..- ++.+.+.++++|.+||-+..... ..-.....+++.+++.++++++++-.
T Consensus 48 ~~~~D~~d-~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 48 VRQADYGD-EAALTSALQGVEKLLLISSSEVG--QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp EEECCTTC-HHHHHHHTTTCSEEEECC----------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EEEcCCCC-HHHHHHHHhCCCEEEEeCCCCch--HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 44577653 34677788999999997764211 11123445666777788888887643
No 94
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=23.58 E-value=80 Score=25.40 Aligned_cols=59 Identities=15% Similarity=0.258 Sum_probs=37.5
Q ss_pred eEEEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCC------CCCCCHHHHHHHHHhcCCCeEEEE
Q 025514 153 NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSS------STHFGLPRALEEVRKIQPKRTLFI 212 (251)
Q Consensus 153 ~i~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~------~~H~t~~ea~~~a~~~~~k~lvlt 212 (251)
..++.+|..- ++++.++++++|++||-+....... ..........+.+++.+.+++|++
T Consensus 45 ~~~~~~Dl~d-~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~ 109 (267)
T 3rft_A 45 EECVQCDLAD-ANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109 (267)
T ss_dssp EEEEECCTTC-HHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEcCCCC-HHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 3456678764 3567788899999999987543211 111222334555677788888876
No 95
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.06 E-value=54 Score=25.45 Aligned_cols=58 Identities=17% Similarity=0.109 Sum_probs=34.5
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCC-CCCC---CCCHHHHHHHHHhcCCCeEEEEc
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDR-SSST---HFGLPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~-~~~~---H~t~~ea~~~a~~~~~k~lvltH 213 (251)
++.+|-.- ++++.+.++++|++|+-+..... .... -......++.+++.++++++++-
T Consensus 50 ~~~~Dl~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 50 VKKADVSS-LDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp EECCCTTC-HHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEecCCC-HHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 45677654 35677888999999997754321 1111 11233455666777888877654
No 96
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=22.74 E-value=1.6e+02 Score=23.79 Aligned_cols=56 Identities=13% Similarity=0.085 Sum_probs=37.9
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCCHHHHHHHHHhcC-CCeEEEE
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQ-PKRTLFI 212 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t~~ea~~~a~~~~-~k~lvlt 212 (251)
++.+|..- ++.+.+.++++|.+|+-+...... ..-.....+++.+++.+ +++++..
T Consensus 59 ~~~~D~~d-~~~l~~~~~~~d~vi~~a~~~~~~-~~~~~~~~l~~aa~~~g~v~~~v~S 115 (313)
T 1qyd_A 59 LIEASLDD-HQRLVDALKQVDVVISALAGGVLS-HHILEQLKLVEAIKEAGNIKRFLPS 115 (313)
T ss_dssp EECCCSSC-HHHHHHHHTTCSEEEECCCCSSSS-TTTTTHHHHHHHHHHSCCCSEEECS
T ss_pred EEeCCCCC-HHHHHHHHhCCCEEEECCccccch-hhHHHHHHHHHHHHhcCCCceEEec
Confidence 34567653 356778889999999987654221 12234466777888888 9999853
No 97
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=20.98 E-value=53 Score=28.23 Aligned_cols=29 Identities=17% Similarity=0.078 Sum_probs=26.1
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEccCC
Q 025514 188 SSTHFGLPRALEEVRKIQPKRTLFIGMMH 216 (251)
Q Consensus 188 ~~~H~t~~ea~~~a~~~~~k~lvltH~s~ 216 (251)
-.+|++.+|..++.+.+++|+++-+|-++
T Consensus 274 ~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge 302 (336)
T 3zdk_A 274 YSDHSSYSELRAFVAALKPCQVVPIVSRR 302 (336)
T ss_dssp CCSSCBHHHHHHHHHHHCCSCEEESCTTS
T ss_pred ecCCCCHHHHHHHHHHhCCCEEEEEECCc
Confidence 47999999999999999999999999333
No 98
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=20.56 E-value=1.7e+02 Score=21.70 Aligned_cols=58 Identities=9% Similarity=0.032 Sum_probs=35.5
Q ss_pred EEeCCCCCCCcchhhhhCCCcEEEEcccCCCCCCCCCCC---HHHHHHHHHhcCCCeEEEEc
Q 025514 155 CYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFG---LPRALEEVRKIQPKRTLFIG 213 (251)
Q Consensus 155 ~Ys~Dt~~~~e~~~~~~~~~DlLi~E~~~~~~~~~~H~t---~~ea~~~a~~~~~k~lvltH 213 (251)
++.+|..- ++.+.+.++++|++|+-+.......+...+ ....++.+++.++++++++-
T Consensus 50 ~~~~D~~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~S 110 (206)
T 1hdo_A 50 VVVGDVLQ-AADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110 (206)
T ss_dssp EEESCTTS-HHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EEEecCCC-HHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 45677654 356778889999999988654321111111 33445556667888887654
No 99
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=20.25 E-value=1.7e+02 Score=24.45 Aligned_cols=65 Identities=15% Similarity=0.052 Sum_probs=38.1
Q ss_pred CCCc--EEEEcccCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEccCCCCChHHHHHHHHhhhhcCCCcEEEeecCeE
Q 025514 172 QDCE--ILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLR 246 (251)
Q Consensus 172 ~~~D--lLi~E~~~~~~~~~~H~t~~ea~~~a~~~~~k~lvltH~s~~~~~~~l~~~l~~~~~~~~~~v~~A~DG~~ 246 (251)
.+.+ +|++|.+..-. ...++.++.++.+..-+++||+............... .+.++.+-.+|..
T Consensus 218 ~~P~e~lLvLDptsglD------~~~~~~~~~~~~g~t~iiiThlD~~~~~g~~l~~~~~----~~~pi~~i~~Ge~ 284 (302)
T 3b9q_A 218 GAPNEILLVLDGNTGLN------MLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEE----LGIPVKFIGVGEA 284 (302)
T ss_dssp TCCSEEEEEEEGGGGGG------GHHHHHHHHHHTCCCEEEEECCSSCSCTHHHHHHHHH----HCCCEEEEECSSS
T ss_pred cCCCeeEEEEeCCCCcC------HHHHHHHHHHhcCCCEEEEeCCCCCCccChheehHHH----HCCCEEEEeCCCC
Confidence 4689 99999543211 2245555656678889999998765444333333332 2235665555543
Done!