Query 025518
Match_columns 251
No_of_seqs 148 out of 2950
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 06:39:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03103 trio_acet_GNAT GNAT- 99.7 1.4E-16 3.1E-21 154.8 19.3 156 13-223 61-225 (547)
2 PTZ00330 acetyltransferase; Pr 99.6 9.1E-15 2E-19 117.0 15.7 129 41-210 6-140 (147)
3 PRK10146 aminoalkylphosphonic 99.6 7E-15 1.5E-19 117.2 12.2 79 132-210 51-137 (144)
4 PF13673 Acetyltransf_10: Acet 99.6 1.1E-14 2.4E-19 111.9 10.5 71 131-206 47-117 (117)
5 PF00583 Acetyltransf_1: Acety 99.6 1.5E-14 3.3E-19 104.6 10.6 75 133-207 1-83 (83)
6 PF13508 Acetyltransf_7: Acety 99.6 5.4E-14 1.2E-18 102.0 12.5 76 129-208 4-79 (79)
7 PLN02706 glucosamine 6-phospha 99.6 8.4E-14 1.8E-18 112.3 14.8 75 136-210 63-143 (150)
8 TIGR02382 wecD_rffC TDP-D-fuco 99.6 1.3E-13 2.8E-18 116.6 15.7 79 132-210 103-184 (191)
9 TIGR03827 GNAT_ablB putative b 99.5 1.4E-13 3E-18 122.4 15.4 129 38-210 112-244 (266)
10 PRK03624 putative acetyltransf 99.5 2.3E-13 4.9E-18 106.8 13.8 76 134-210 51-129 (140)
11 PRK10975 TDP-fucosamine acetyl 99.5 6.8E-13 1.5E-17 112.2 15.6 77 134-210 108-187 (194)
12 PHA00673 acetyltransferase dom 99.5 4E-13 8.7E-18 110.2 13.6 78 133-210 60-145 (154)
13 TIGR01575 rimI ribosomal-prote 99.5 2.4E-12 5.2E-17 100.0 13.9 75 135-210 38-115 (131)
14 KOG3216 Diamine acetyltransfer 99.5 1.7E-12 3.7E-17 105.0 13.1 134 40-210 2-145 (163)
15 PRK07922 N-acetylglutamate syn 99.4 2.2E-12 4.7E-17 107.4 14.0 74 135-210 53-126 (169)
16 TIGR02406 ectoine_EctA L-2,4-d 99.4 1.5E-12 3.2E-17 107.0 12.4 76 135-210 47-127 (157)
17 TIGR03448 mycothiol_MshD mycot 99.4 2.6E-12 5.7E-17 114.7 14.9 170 5-210 113-287 (292)
18 PRK07757 acetyltransferase; Pr 99.4 3.4E-12 7.4E-17 103.1 14.2 99 135-235 48-151 (152)
19 PLN02825 amino-acid N-acetyltr 99.4 2.8E-13 6.2E-18 130.3 8.0 104 130-234 409-513 (515)
20 PF13527 Acetyltransf_9: Acety 99.4 2.1E-12 4.5E-17 101.0 11.4 72 135-208 48-126 (127)
21 PRK10314 putative acyltransfer 99.4 1.3E-12 2.9E-17 107.1 10.8 76 135-210 55-133 (153)
22 PRK09491 rimI ribosomal-protei 99.4 6.8E-12 1.5E-16 100.8 14.5 75 135-210 47-124 (146)
23 KOG3139 N-acetyltransferase [G 99.4 3.4E-12 7.4E-17 104.2 12.5 74 137-210 66-145 (165)
24 KOG3396 Glucosamine-phosphate 99.4 3.2E-12 6.9E-17 101.5 11.9 79 132-210 59-143 (150)
25 cd02169 Citrate_lyase_ligase C 99.4 2E-12 4.4E-17 116.9 11.7 91 128-223 6-97 (297)
26 PRK10140 putative acetyltransf 99.4 2.6E-11 5.7E-16 98.1 16.6 77 134-211 57-141 (162)
27 PRK09831 putative acyltransfer 99.4 4E-12 8.8E-17 102.6 10.3 71 131-211 56-126 (147)
28 PRK12308 bifunctional arginino 99.3 1.2E-11 2.6E-16 122.1 13.2 77 132-210 507-583 (614)
29 PF13420 Acetyltransf_4: Acety 99.3 3.3E-11 7.1E-16 97.2 13.1 87 132-218 55-146 (155)
30 COG1246 ArgA N-acetylglutamate 99.3 1.9E-11 4E-16 99.6 11.2 83 135-218 47-130 (153)
31 TIGR01890 N-Ac-Glu-synth amino 99.3 8.2E-12 1.8E-16 118.3 10.5 79 133-212 327-406 (429)
32 TIGR01686 FkbH FkbH-like domai 99.3 3.6E-11 7.9E-16 109.7 14.1 126 42-209 187-319 (320)
33 PRK05279 N-acetylglutamate syn 99.3 6.6E-12 1.4E-16 119.3 9.1 99 133-232 339-438 (441)
34 PRK10514 putative acetyltransf 99.3 3.8E-11 8.2E-16 95.9 11.4 66 135-210 57-125 (145)
35 COG0456 RimI Acetyltransferase 99.3 8.9E-11 1.9E-15 96.5 13.3 73 138-210 72-153 (177)
36 PHA01807 hypothetical protein 99.3 6.7E-11 1.5E-15 97.3 11.7 72 133-204 58-136 (153)
37 COG1247 Sortase and related ac 99.2 1.8E-10 4E-15 95.9 13.6 133 42-210 2-142 (169)
38 TIGR00124 cit_ly_ligase [citra 99.2 7.2E-11 1.6E-15 108.4 12.3 74 133-211 36-109 (332)
39 COG3153 Predicted acetyltransf 99.2 2.4E-10 5.1E-15 95.4 12.5 125 41-212 3-132 (171)
40 TIGR03448 mycothiol_MshD mycot 99.2 3.2E-10 6.9E-15 101.2 13.7 73 134-210 52-127 (292)
41 PRK10562 putative acetyltransf 99.2 4.2E-10 9.2E-15 90.4 12.3 67 135-210 55-124 (145)
42 PRK13688 hypothetical protein; 99.2 3E-10 6.6E-15 93.7 10.6 73 133-210 50-132 (156)
43 PRK10151 ribosomal-protein-L7/ 99.1 1.6E-09 3.5E-14 89.9 14.3 142 39-211 8-155 (179)
44 PRK01346 hypothetical protein; 99.1 7E-10 1.5E-14 104.1 13.2 75 134-210 53-135 (411)
45 PF13523 Acetyltransf_8: Acety 99.1 1.6E-09 3.5E-14 87.4 12.6 77 134-210 54-140 (152)
46 PRK10809 ribosomal-protein-S5- 99.1 5.4E-09 1.2E-13 87.9 15.8 77 134-210 83-165 (194)
47 PF13302 Acetyltransf_3: Acety 99.1 3.7E-09 8E-14 83.4 13.9 136 41-207 1-142 (142)
48 PRK15130 spermidine N1-acetylt 99.1 1.9E-09 4.2E-14 90.0 12.7 76 135-211 64-145 (186)
49 KOG2488 Acetyltransferase (GNA 99.0 1.4E-09 3.1E-14 91.1 9.7 75 136-210 101-181 (202)
50 TIGR03585 PseH pseudaminic aci 99.0 1.4E-08 3.1E-13 81.7 12.3 77 134-212 57-139 (156)
51 PF08445 FR47: FR47-like prote 98.9 1.4E-08 3.1E-13 75.4 10.3 70 136-210 9-81 (86)
52 KOG3397 Acetyltransferases [Ge 98.9 4.9E-09 1.1E-13 86.8 7.5 83 127-210 56-140 (225)
53 COG2153 ElaA Predicted acyltra 98.9 1.1E-08 2.3E-13 82.5 8.6 76 135-210 57-135 (155)
54 TIGR01211 ELP3 histone acetylt 98.8 3.4E-08 7.4E-13 95.7 11.5 75 136-210 422-515 (522)
55 PF13718 GNAT_acetyltr_2: GNAT 98.8 1.1E-07 2.3E-12 81.2 11.8 59 152-210 90-175 (196)
56 cd04301 NAT_SF N-Acyltransfera 98.7 9.5E-08 2.1E-12 63.4 8.2 57 135-191 6-64 (65)
57 KOG3138 Predicted N-acetyltran 98.7 1.4E-07 3.1E-12 79.7 10.4 59 152-210 89-151 (187)
58 COG3393 Predicted acetyltransf 98.5 3.7E-07 8E-12 80.5 8.9 84 126-210 176-261 (268)
59 COG1444 Predicted P-loop ATPas 98.5 1.1E-06 2.4E-11 87.7 12.8 57 153-210 532-590 (758)
60 KOG3234 Acetyltransferase, (GN 98.5 8.7E-07 1.9E-11 72.4 9.8 76 135-210 49-130 (173)
61 COG1670 RimL Acetyltransferase 98.5 2.3E-06 5.1E-11 69.7 11.3 78 136-214 76-161 (187)
62 KOG3235 Subunit of the major N 98.4 2.1E-06 4.5E-11 70.4 8.7 78 133-210 47-134 (193)
63 COG3053 CitC Citrate lyase syn 98.3 5.3E-06 1.2E-10 74.1 10.6 106 128-238 37-146 (352)
64 PF14542 Acetyltransf_CG: GCN5 98.2 9.9E-06 2.1E-10 59.1 8.8 65 136-203 7-71 (78)
65 PF12568 DUF3749: Acetyltransf 98.2 5.8E-05 1.3E-09 60.0 12.3 72 136-210 46-124 (128)
66 COG3981 Predicted acetyltransf 98.0 4.9E-05 1.1E-09 63.2 9.2 79 130-210 72-158 (174)
67 COG2388 Predicted acetyltransf 98.0 5.9E-05 1.3E-09 57.6 8.5 59 135-194 22-80 (99)
68 KOG4144 Arylalkylamine N-acety 97.9 1.1E-05 2.4E-10 65.9 3.8 78 136-213 70-163 (190)
69 COG0454 WecD Histone acetyltra 97.8 2.7E-05 5.9E-10 55.6 4.8 44 158-206 87-130 (156)
70 PF12746 GNAT_acetyltran: GNAT 97.8 0.00024 5.3E-09 63.4 11.5 80 127-210 167-246 (265)
71 COG3818 Predicted acetyltransf 97.8 0.00018 3.9E-09 57.4 8.6 120 42-210 8-147 (167)
72 TIGR03694 exosort_acyl putativ 97.5 0.0013 2.9E-08 57.9 11.8 84 152-235 111-222 (241)
73 PRK13834 putative autoinducer 97.4 0.0045 9.7E-08 53.4 12.6 90 124-213 50-167 (207)
74 PF13480 Acetyltransf_6: Acety 97.3 0.0074 1.6E-07 47.0 12.6 59 134-193 77-135 (142)
75 COG3375 Uncharacterized conser 97.3 0.0027 5.9E-08 55.0 10.1 125 42-208 3-134 (266)
76 PF00765 Autoind_synth: Autoin 97.3 0.008 1.7E-07 50.8 12.9 79 135-213 52-157 (182)
77 COG4552 Eis Predicted acetyltr 97.2 0.00069 1.5E-08 62.3 5.5 73 136-210 47-126 (389)
78 PF06852 DUF1248: Protein of u 97.1 0.012 2.5E-07 49.8 12.2 103 78-210 26-136 (181)
79 PF08444 Gly_acyl_tr_C: Aralky 97.0 0.0034 7.3E-08 47.0 7.3 70 136-210 7-79 (89)
80 PF04958 AstA: Arginine N-succ 97.0 0.016 3.4E-07 53.6 12.5 139 42-208 2-185 (342)
81 COG5628 Predicted acetyltransf 96.9 0.0033 7.2E-08 49.5 6.8 71 136-208 45-120 (143)
82 PRK10456 arginine succinyltran 96.9 0.0065 1.4E-07 56.0 9.7 105 42-176 2-143 (344)
83 PF01233 NMT: Myristoyl-CoA:pr 96.8 0.028 6.1E-07 46.5 11.8 119 35-188 17-146 (162)
84 KOG4135 Predicted phosphogluco 96.7 0.0061 1.3E-07 49.8 6.6 59 152-210 107-169 (185)
85 COG3882 FkbH Predicted enzyme 96.6 0.0098 2.1E-07 57.0 8.6 135 41-213 413-552 (574)
86 TIGR03244 arg_catab_AstA argin 96.6 0.013 2.8E-07 54.0 9.1 103 44-176 2-141 (336)
87 TIGR03245 arg_AOST_alph argini 96.4 0.023 5E-07 52.3 9.3 104 44-176 2-142 (336)
88 TIGR03243 arg_catab_AOST argin 96.4 0.026 5.5E-07 52.0 9.5 103 44-176 2-141 (335)
89 COG1243 ELP3 Histone acetyltra 96.1 0.0085 1.8E-07 57.0 4.9 50 161-210 459-508 (515)
90 COG3916 LasI N-acyl-L-homoseri 95.6 0.3 6.5E-06 42.1 11.8 77 134-210 59-162 (209)
91 PF13880 Acetyltransf_13: ESCO 95.5 0.015 3.1E-07 41.6 3.0 27 155-181 8-34 (70)
92 PF05301 Mec-17: Touch recepto 95.2 0.16 3.5E-06 39.9 8.4 72 136-208 17-103 (120)
93 PF01853 MOZ_SAS: MOZ/SAS fami 94.4 0.22 4.8E-06 42.3 7.9 60 126-185 53-113 (188)
94 KOG2535 RNA polymerase II elon 94.3 0.062 1.4E-06 49.7 4.6 49 162-210 497-546 (554)
95 cd04264 DUF619-NAGS DUF619 dom 94.2 0.17 3.7E-06 38.6 6.1 46 136-181 16-63 (99)
96 COG3138 AstA Arginine/ornithin 94.1 0.19 4.2E-06 45.2 7.1 101 43-173 3-140 (336)
97 PF04768 DUF619: Protein of un 94.0 0.32 6.9E-06 40.7 8.0 125 41-218 21-152 (170)
98 COG2401 ABC-type ATPase fused 93.8 0.057 1.2E-06 51.4 3.5 56 153-208 242-305 (593)
99 KOG2036 Predicted P-loop ATPas 92.3 0.34 7.3E-06 48.7 6.4 32 152-183 614-645 (1011)
100 cd04265 DUF619-NAGS-U DUF619 d 92.3 0.45 9.7E-06 36.3 5.8 44 139-182 20-64 (99)
101 PF09390 DUF1999: Protein of u 92.2 4.8 0.0001 32.8 11.7 74 135-209 63-139 (161)
102 PLN03238 probable histone acet 92.1 0.51 1.1E-05 42.6 6.7 63 123-185 125-188 (290)
103 PRK01305 arginyl-tRNA-protein 91.3 5.8 0.00012 35.1 12.5 56 135-192 151-207 (240)
104 PF04377 ATE_C: Arginine-tRNA- 91.0 1.7 3.7E-05 34.6 8.1 55 135-192 46-102 (128)
105 PLN03239 histone acetyltransfe 90.2 0.76 1.6E-05 42.6 6.1 62 124-185 184-246 (351)
106 PTZ00064 histone acetyltransfe 89.0 0.86 1.9E-05 44.1 5.7 61 125-185 356-417 (552)
107 KOG2779 N-myristoyl transferas 88.1 6.4 0.00014 36.7 10.5 115 39-188 78-203 (421)
108 PRK14852 hypothetical protein; 87.9 3.1 6.7E-05 43.7 9.3 60 151-210 120-180 (989)
109 PLN00104 MYST -like histone ac 87.3 0.8 1.7E-05 43.9 4.3 62 124-185 277-339 (450)
110 TIGR03019 pepcterm_femAB FemAB 86.2 3.8 8.2E-05 37.3 8.1 75 135-210 203-280 (330)
111 KOG4601 Uncharacterized conser 84.9 1.4 3.1E-05 38.5 4.3 86 137-223 81-180 (264)
112 PF13444 Acetyltransf_5: Acety 84.7 2.7 5.9E-05 31.6 5.4 23 152-174 78-100 (101)
113 KOG2696 Histone acetyltransfer 84.6 2.2 4.8E-05 39.8 5.6 42 151-194 216-258 (403)
114 KOG2747 Histone acetyltransfer 84.2 1.3 2.9E-05 41.7 4.1 61 123-184 232-292 (396)
115 PF02474 NodA: Nodulation prot 81.8 2.3 5.1E-05 35.7 4.3 54 151-205 84-137 (196)
116 PF09924 DUF2156: Uncharacteri 81.3 7.6 0.00016 34.8 7.8 65 129-193 181-246 (299)
117 COG5630 ARG2 Acetylglutamate s 80.3 8.2 0.00018 36.4 7.6 88 46-182 340-431 (495)
118 TIGR03827 GNAT_ablB putative b 77.5 6.7 0.00015 34.6 6.2 44 167-210 20-63 (266)
119 PF04339 DUF482: Protein of un 73.7 81 0.0018 29.7 13.1 54 157-210 105-159 (370)
120 KOG3698 Hyaluronoglucosaminida 73.4 20 0.00044 35.7 8.5 52 159-210 823-877 (891)
121 PRK04531 acetylglutamate kinas 70.2 13 0.00028 35.3 6.4 93 136-237 295-391 (398)
122 COG2898 Uncharacterized conser 67.6 29 0.00062 34.3 8.3 106 126-238 391-516 (538)
123 cd04266 DUF619-NAGS-FABP DUF61 66.8 24 0.00052 27.3 6.2 31 150-180 37-68 (108)
124 PRK02983 lysS lysyl-tRNA synth 64.3 40 0.00086 36.3 9.2 58 134-193 427-485 (1094)
125 COG5027 SAS2 Histone acetyltra 58.1 5 0.00011 37.3 1.1 54 124-177 233-287 (395)
126 KOG2779 N-myristoyl transferas 57.2 1.1E+02 0.0025 28.7 9.7 83 130-218 310-403 (421)
127 PF11124 Pho86: Inorganic phos 57.0 82 0.0018 28.8 8.7 75 136-210 177-270 (304)
128 cd03173 DUF619-like DUF619 dom 54.0 71 0.0015 24.2 6.7 45 137-181 18-62 (98)
129 PRK00756 acyltransferase NodA; 51.0 37 0.0008 28.5 5.0 57 151-208 84-143 (196)
130 PF12261 T_hemolysin: Thermost 46.5 58 0.0013 27.4 5.7 55 152-210 87-141 (179)
131 cd07235 MRD Mitomycin C resist 38.7 38 0.00082 25.1 3.2 22 188-209 3-26 (122)
132 TIGR02990 ectoine_eutA ectoine 38.2 68 0.0015 28.2 5.1 40 171-210 105-150 (239)
133 COG2935 Putative arginyl-tRNA: 38.1 1.3E+02 0.0028 26.8 6.7 54 136-192 159-214 (253)
134 PF06849 DUF1246: Protein of u 37.2 79 0.0017 25.1 4.8 61 176-243 11-71 (124)
135 PF07395 Mig-14: Mig-14; Inte 37.0 1.1E+02 0.0023 27.6 6.1 52 136-187 181-239 (264)
136 PHA00432 internal virion prote 35.2 1.9E+02 0.0042 23.3 6.8 18 194-211 104-121 (137)
137 KOG3014 Protein involved in es 33.0 1.8E+02 0.004 25.9 6.8 30 152-181 183-212 (257)
138 COG3473 Maleate cis-trans isom 29.4 1.5E+02 0.0033 25.9 5.6 54 178-233 110-170 (238)
139 PF04339 DUF482: Protein of un 29.1 4.9E+02 0.011 24.5 9.5 86 127-217 250-335 (370)
140 PRK15312 antimicrobial resista 28.6 1.8E+02 0.0038 26.6 6.1 51 136-186 211-268 (298)
141 cd08356 Glo_EDI_BRP_like_17 Th 28.5 77 0.0017 23.5 3.4 17 195-211 13-29 (113)
142 cd08353 Glo_EDI_BRP_like_7 Thi 28.4 63 0.0014 24.7 3.0 25 185-209 3-29 (142)
143 PHA01733 hypothetical protein 28.4 1.7E+02 0.0037 24.1 5.5 74 135-211 54-132 (153)
144 PF02388 FemAB: FemAB family; 28.3 1.8E+02 0.0039 27.5 6.5 74 136-209 44-138 (406)
145 PHA02769 hypothetical protein; 27.4 57 0.0012 25.7 2.5 41 170-210 94-138 (154)
146 cd07267 THT_Oxygenase_N N-term 26.8 1.2E+02 0.0025 22.3 4.1 25 186-210 4-30 (113)
147 PF02799 NMT_C: Myristoyl-CoA: 25.6 4.2E+02 0.0091 22.6 12.8 125 49-217 35-170 (190)
148 COG5092 NMT1 N-myristoyl trans 24.9 1.7E+02 0.0037 27.2 5.4 52 136-187 142-200 (451)
149 cd09012 Glo_EDI_BRP_like_24 Th 24.6 92 0.002 23.2 3.3 22 188-209 3-26 (124)
150 COG5270 PUA domain (predicted 23.7 74 0.0016 27.1 2.6 34 128-169 163-196 (202)
151 cd08344 MhqB_like_N N-terminal 22.2 1.5E+02 0.0032 21.7 3.9 27 185-211 2-30 (112)
152 PF00925 GTP_cyclohydro2: GTP 21.5 4.1E+02 0.0088 21.8 6.7 43 161-210 122-165 (169)
No 1
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.74 E-value=1.4e-16 Score=154.84 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=112.5
Q ss_pred CCccceeEEeecCCCCCCCccCCCCCCCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHH
Q 025518 13 YPSAYMELRWVRGRGKGKCELNFKPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLA 92 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~ 92 (251)
-||+|+||+|..+++... .++.++||......|.+.+.+||..+++. +.+.+.+...
T Consensus 61 ~~~~~~~~~~~~~~~~~~-------~~~g~~IR~~~~~~D~~~I~~L~~~~~~~----------------p~~~~~~~~~ 117 (547)
T TIGR03103 61 DPSHTYRLWLTQYRPAAR-------TPRGFTVRRLRGPADVDAINRLYAARGMV----------------PVRVDFVLDH 117 (547)
T ss_pred CchhceEeccccCCcCcC-------CCCCcEEEeCCChhHHHHHHHHHHhcCCC----------------CCCHHHHHHH
Confidence 499999999998776532 45679999854689999999999887542 1123333322
Q ss_pred hhcccceeeeecccccCccccccccccccccCCcceEEEEEeeCCeEEEEEEEE------ecCCceEEEEEEeeCCCccc
Q 025518 93 LSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAV------SDVGLTASIHDIMVIPSLRQ 166 (251)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~v~va~~~g~iVG~~~~~------~d~~~~~~I~~l~V~p~~rg 166 (251)
+...... ++++..+++|++|||+... .+.....+|+.|+|+|+|||
T Consensus 118 ~~~~~~~----------------------------~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg 169 (547)
T TIGR03103 118 RHSRAIT----------------------------YLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAH 169 (547)
T ss_pred hcCCCce----------------------------EEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcC
Confidence 2211111 1112222368999999753 23334578999999999999
Q ss_pred CcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEeecCceeeEEeccCC
Q 025518 167 MGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDILGSTTMMYAKTAS 223 (251)
Q Consensus 167 ~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~~~~~~~~~~~~~~ 223 (251)
+|||++||+++++++++.|+..|.+.+ |..+++||+|+||+... .+..+++.+
T Consensus 170 ~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~----~y~~~d~~~ 225 (547)
T TIGR03103 170 PGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIP----VFALKRKNA 225 (547)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEee----EEEEeccCC
Confidence 999999999999999999999999987 56788999999999865 344444443
No 2
>PTZ00330 acetyltransferase; Provisional
Probab=99.64 E-value=9.1e-15 Score=116.95 Aligned_cols=129 Identities=18% Similarity=0.262 Sum_probs=95.1
Q ss_pred ceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccc
Q 025518 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (251)
Q Consensus 41 ~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 120 (251)
.+.||.. ...|.+.+.+++...... ...+.+.+.....+...
T Consensus 6 ~~~ir~~-~~~D~~~i~~l~~~~~~~---------------~~~~~~~~~~~~~~~~~---------------------- 47 (147)
T PTZ00330 6 SLELRDL-EEGDLGSVLELLSHLTSA---------------PALSQEELEQIAARRRL---------------------- 47 (147)
T ss_pred eEEEEEc-ccccHHHHHHHHHHhcCC---------------CccchhHHHHHHHHHhc----------------------
Confidence 4788885 899999999999765321 11233444443332110
Q ss_pred cccCCcceEEEEEeeCCeEEEEEEEEec------CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec
Q 025518 121 LLGNLAQRVVPVTPSNGQLVGFGRAVSD------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (251)
Q Consensus 121 ~~~~~~~~~v~va~~~g~iVG~~~~~~d------~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~ 194 (251)
......+++++.+|++||++.+... +....+|..++|+|+|||+|||++|++++++++++.++..+.+.+|
T Consensus 48 ---~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n 124 (147)
T PTZ00330 48 ---AGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCT 124 (147)
T ss_pred ---CCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 0011123444568899999987532 2235789999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHCCCeEee
Q 025518 195 EEERLFFEACGFGNDI 210 (251)
Q Consensus 195 ~~a~~fYek~GF~~~~ 210 (251)
..+.+||+|+||+...
T Consensus 125 ~~a~~~y~k~GF~~~~ 140 (147)
T PTZ00330 125 EDMVAFYKKLGFRACE 140 (147)
T ss_pred hHHHHHHHHCCCEEec
Confidence 9999999999999865
No 3
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.62 E-value=7e-15 Score=117.23 Aligned_cols=79 Identities=14% Similarity=0.238 Sum_probs=66.9
Q ss_pred EEeeCCeEEEEEEEEec-----CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHH
Q 025518 132 VTPSNGQLVGFGRAVSD-----VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEA 203 (251)
Q Consensus 132 va~~~g~iVG~~~~~~d-----~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek 203 (251)
++++++++||++.+... .....+|..++|+|++||+|+|+.|++++++.+++.|+..+.+.+ |..+.+||+|
T Consensus 51 v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~ 130 (144)
T PRK10146 51 LALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLR 130 (144)
T ss_pred EEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH
Confidence 34568999999987532 222457899999999999999999999999999999999999987 5688899999
Q ss_pred CCCeEee
Q 025518 204 CGFGNDI 210 (251)
Q Consensus 204 ~GF~~~~ 210 (251)
+||+...
T Consensus 131 ~Gf~~~~ 137 (144)
T PRK10146 131 EGYEQSH 137 (144)
T ss_pred cCCchhh
Confidence 9999764
No 4
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.59 E-value=1.1e-14 Score=111.93 Aligned_cols=71 Identities=27% Similarity=0.487 Sum_probs=59.4
Q ss_pred EEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCC
Q 025518 131 PVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGF 206 (251)
Q Consensus 131 ~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF 206 (251)
+++++++++|||+.+. . ...|..++|+|+|||+|||++|++++++.+++ ++..+.+..+..+.+||+++||
T Consensus 47 ~v~~~~~~ivG~~~~~-~---~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 47 FVAEEGGEIVGFAWLE-P---DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp EEEEETTEEEEEEEEE-T---CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred EEEEECCEEEEEEEEc-C---CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 3445689999999875 2 23388999999999999999999999999976 9999999989999999999998
No 5
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.59 E-value=1.5e-14 Score=104.62 Aligned_cols=75 Identities=32% Similarity=0.449 Sum_probs=66.0
Q ss_pred EeeCCeEEEEEEEEecC-----CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHC
Q 025518 133 TPSNGQLVGFGRAVSDV-----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEAC 204 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d~-----~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~ 204 (251)
|+++|++||++.+.... ....+|+.++|+|+|||+|||+.|++.+++.+++.|+..|.+.+ |..+.+||+|+
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 35699999999875432 36899999999999999999999999999999999999999998 45567899999
Q ss_pred CCe
Q 025518 205 GFG 207 (251)
Q Consensus 205 GF~ 207 (251)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 6
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.58 E-value=5.4e-14 Score=102.03 Aligned_cols=76 Identities=28% Similarity=0.376 Sum_probs=64.8
Q ss_pred EEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeE
Q 025518 129 VVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGN 208 (251)
Q Consensus 129 ~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~ 208 (251)
.++++++++++||++.+..++. ..+|..|+|+|++||+|||++||+++.+.+.. ..+.+.+++.+..||+|+||++
T Consensus 4 ~~~~~~~~~~ivG~~~~~~~~~-~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWPNED-FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFEE 79 (79)
T ss_dssp EEEEEEETTEEEEEEEEEETTT-EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEEE
T ss_pred EEEEEEECCEEEEEEEEEEcCC-EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCCC
Confidence 4556667999999999877655 88999999999999999999999999998853 4577888899999999999984
No 7
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.57 E-value=8.4e-14 Score=112.28 Aligned_cols=75 Identities=27% Similarity=0.570 Sum_probs=65.5
Q ss_pred CCeEEEEEEEEe------cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEe
Q 025518 136 NGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGND 209 (251)
Q Consensus 136 ~g~iVG~~~~~~------d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~ 209 (251)
++++||++.+.. ......+|..++|+|+|||+|||+.|++.+++++++.|+.+|.+.+...+.+||+|+||+..
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~ 142 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRK 142 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEe
Confidence 689999997632 22345678889999999999999999999999999999999999998778899999999986
Q ss_pred e
Q 025518 210 I 210 (251)
Q Consensus 210 ~ 210 (251)
.
T Consensus 143 g 143 (150)
T PLN02706 143 E 143 (150)
T ss_pred h
Confidence 5
No 8
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.56 E-value=1.3e-13 Score=116.55 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=67.8
Q ss_pred EEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeE
Q 025518 132 VTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGN 208 (251)
Q Consensus 132 va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~ 208 (251)
+.+++|++||++.+..-.....+|..++|+|++||+|+|++|++.+++++++.|+..|.+.+ |..+.+||+|+||+.
T Consensus 103 ~~~~~g~iiG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~ 182 (191)
T TIGR02382 103 LRDASGDPRGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANI 182 (191)
T ss_pred EEccCCeEEEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCcc
Confidence 33457899999987543334578999999999999999999999999999999999999997 667889999999998
Q ss_pred ee
Q 025518 209 DI 210 (251)
Q Consensus 209 ~~ 210 (251)
..
T Consensus 183 ~~ 184 (191)
T TIGR02382 183 ES 184 (191)
T ss_pred cc
Confidence 65
No 9
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.55 E-value=1.4e-13 Score=122.44 Aligned_cols=129 Identities=12% Similarity=0.214 Sum_probs=94.6
Q ss_pred CCCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccc
Q 025518 38 SMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRL 117 (251)
Q Consensus 38 ~~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.++.+.||.. ...|.+++.+|+..+.. .++. ...+.+.+...+.+...+
T Consensus 112 ~~~~~~IR~a-~~~D~~~l~~L~~~v~~---~~~~---------~~~~~~~l~~~~~~~~~~------------------ 160 (266)
T TIGR03827 112 LPEGFTLRIA-TEDDADAMAALYRKVFP---TYPF---------PIHDPAYLLETMKSNVVY------------------ 160 (266)
T ss_pred CCCceEEEEC-CHHHHHHHHHHHHHHhc---cCCC---------CccCHHHHHHHhcCCcEE------------------
Confidence 3556899996 88999999999987621 1111 112334444444322221
Q ss_pred ccccccCCcceEEEEEeeCCeEEEEEEEE-ecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---
Q 025518 118 MVPLLGNLAQRVVPVTPSNGQLVGFGRAV-SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC--- 193 (251)
Q Consensus 118 ~~e~~~~~~~~~v~va~~~g~iVG~~~~~-~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~--- 193 (251)
+++..+|++||++.+. .......+|.+++|+|+|||+|||++||+.+++++++.|+..+.+.+
T Consensus 161 -------------~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~ 227 (266)
T TIGR03827 161 -------------FGVEDGGKIIALASAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARAS 227 (266)
T ss_pred -------------EEEEECCEEEEEEEEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhc
Confidence 2223489999999863 23344678999999999999999999999999999999999988877
Q ss_pred cHhHHHHHHHCCCeEee
Q 025518 194 SEEERLFFEACGFGNDI 210 (251)
Q Consensus 194 ~~~a~~fYek~GF~~~~ 210 (251)
|..+..+|+|+||+..+
T Consensus 228 n~~a~~ly~k~GF~~~G 244 (266)
T TIGR03827 228 SYGMNITFARLGYAYGG 244 (266)
T ss_pred chhHHHHHHHcCCcccc
Confidence 55678899999999865
No 10
>PRK03624 putative acetyltransferase; Provisional
Probab=99.54 E-value=2.3e-13 Score=106.81 Aligned_cols=76 Identities=28% Similarity=0.363 Sum_probs=64.8
Q ss_pred eeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 134 PSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
.+++++||++.+..+ ....++..++|+|+|||+|+|+.|++.+++++++.++..+.+.+ |..+.+||+|+||+..+
T Consensus 51 ~~~~~~vG~~~~~~~-~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~ 129 (140)
T PRK03624 51 EVGGEVVGTVMGGYD-GHRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQD 129 (140)
T ss_pred EcCCcEEEEEEeecc-CCCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCcccc
Confidence 357899999976543 33467888999999999999999999999999999999988887 56788899999999754
No 11
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.51 E-value=6.8e-13 Score=112.19 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=66.8
Q ss_pred eeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 134 PSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
++++++||++.+........+|..++|+|+|||+|+|++|++.+++++++.|+..|.+.+ |..+.+||+|+||+..+
T Consensus 108 ~~~g~~vG~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~ 187 (194)
T PRK10975 108 DASGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIES 187 (194)
T ss_pred cCCCCEEEEEEEEecCCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeE
Confidence 346899999987653344578989999999999999999999999999999999999887 56788899999999876
No 12
>PHA00673 acetyltransferase domain containing protein
Probab=99.51 E-value=4e-13 Score=110.23 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=67.6
Q ss_pred EeeCCeEEEEEEEEe------cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe--cHhHHHHHHHC
Q 025518 133 TPSNGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC--SEEERLFFEAC 204 (251)
Q Consensus 133 a~~~g~iVG~~~~~~------d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~--~~~a~~fYek~ 204 (251)
++++|++||++.+.. .+...+.|.+|+|+|++||+|||++|++++++++++.|+..|+++. +.+...||.+.
T Consensus 60 a~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~ 139 (154)
T PHA00673 60 VFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAA 139 (154)
T ss_pred EEECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhC
Confidence 335899999998632 2335778999999999999999999999999999999999999998 56889999999
Q ss_pred CCeEee
Q 025518 205 GFGNDI 210 (251)
Q Consensus 205 GF~~~~ 210 (251)
|+++..
T Consensus 140 g~~~~~ 145 (154)
T PHA00673 140 GYRETN 145 (154)
T ss_pred Cchhhc
Confidence 999753
No 13
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.46 E-value=2.4e-12 Score=99.98 Aligned_cols=75 Identities=21% Similarity=0.350 Sum_probs=64.7
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+++++||++.+..+ ....++..++|+|+|||+|+|++|++++++.+...++..+.+.+ |..+.+||+|+||+...
T Consensus 38 ~~~~~vg~~~~~~~-~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~ 115 (131)
T TIGR01575 38 IGGKVVGYAGVQIV-LDEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIA 115 (131)
T ss_pred cCCeEEEEEEEEec-CCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccc
Confidence 47899999986543 33567889999999999999999999999999988988998876 56678899999999865
No 14
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.7e-12 Score=105.04 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=98.6
Q ss_pred CceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHH--HhhcccceeeeecccccCcccccccc
Q 025518 40 IPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCL--ALSHSFVVVSVFSNLALSDDESSKRL 117 (251)
Q Consensus 40 ~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~--~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..++||.. .+.|.+.+.+|+.+..- |.-... ....+.+.+.. .+++....+.+
T Consensus 2 ~~~~IR~a-t~~D~~~i~rLikela~----Fek~~~-----~v~~te~~l~~~~F~d~~~~~~~v--------------- 56 (163)
T KOG3216|consen 2 DNIRIRLA-TPKDCEDILRLIKELAE----FEKLED-----QVEATEENLARDGFIDPPFKHWLV--------------- 56 (163)
T ss_pred CceEEEec-CcccHHHHHHHHHHHHH----HHHhcc-----chhhchhhhhhhhccCCCccEEEE---------------
Confidence 35788985 89999999999975521 211000 01234445554 34444433333
Q ss_pred ccccccCCcceEEEEEeeCCeEEEEEEEEe-----cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 025518 118 MVPLLGNLAQRVVPVTPSNGQLVGFGRAVS-----DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (251)
Q Consensus 118 ~~e~~~~~~~~~v~va~~~g~iVG~~~~~~-----d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~ 192 (251)
+.+..+++.++||+..+. .+....||.+|+|.|+|||+|+|+.|++.+-+.+.+.|+.+++..
T Consensus 57 ------------~~ie~~~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~ 124 (163)
T KOG3216|consen 57 ------------AAIETSGEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWV 124 (163)
T ss_pred ------------EEEecCCCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEE
Confidence 233334789999998643 344578999999999999999999999999999999999998888
Q ss_pred e---cHhHHHHHHHCCCeEee
Q 025518 193 C---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 193 ~---~~~a~~fYek~GF~~~~ 210 (251)
+ |.+++.||++.|++...
T Consensus 125 vldwN~rAi~lY~k~gaq~l~ 145 (163)
T KOG3216|consen 125 VLDWNHRAILLYEKVGAQDLK 145 (163)
T ss_pred EeccchhHHHHHHHhCccccc
Confidence 7 88999999999999865
No 15
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.45 E-value=2.2e-12 Score=107.40 Aligned_cols=74 Identities=28% Similarity=0.356 Sum_probs=63.6
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
+++++||++.+.........|..++|+|+|||+|||++|++++++++++.|+..+.+.+. +.+||+|+||+...
T Consensus 53 ~~~~iiG~~~~~~~~~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~GF~~~~ 126 (169)
T PRK07922 53 LDGEVVGCGALHVMWEDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARHGFVEID 126 (169)
T ss_pred cCCcEEEEEEEeecCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHCCCEECc
Confidence 588999999765433446778899999999999999999999999999999999987764 47899999999854
No 16
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.44 E-value=1.5e-12 Score=106.97 Aligned_cols=76 Identities=18% Similarity=0.337 Sum_probs=64.5
Q ss_pred eCCeEEEEEEEEe--cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEe
Q 025518 135 SNGQLVGFGRAVS--DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGND 209 (251)
Q Consensus 135 ~~g~iVG~~~~~~--d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~ 209 (251)
+++++||++.+.. ......+++.++|+|++||+|+|++|++.++++++..++..|.+.+ |..+++||+|+||+..
T Consensus 47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~ 126 (157)
T TIGR02406 47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRG 126 (157)
T ss_pred CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence 4789999987542 2334578899999999999999999999999999988988898887 6778889999999874
Q ss_pred e
Q 025518 210 I 210 (251)
Q Consensus 210 ~ 210 (251)
.
T Consensus 127 ~ 127 (157)
T TIGR02406 127 V 127 (157)
T ss_pred C
Confidence 3
No 17
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.44 E-value=2.6e-12 Score=114.68 Aligned_cols=170 Identities=16% Similarity=0.088 Sum_probs=102.8
Q ss_pred hhhhhcccCCccceeEEeecCCCCCCCccCCCCCCCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCccccccccc
Q 025518 5 AATAAASVYPSAYMELRWVRGRGKGKCELNFKPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAV 84 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~ 84 (251)
.|.++..+++....+-.+.........+.+....+..++++......|...+.++.... |.......+|
T Consensus 113 ~a~~fy~~~Gf~~~~~~~~~~~~l~~~~~~~~~~~~g~~~r~~~~~~d~~~~~~~~~~~------~~~~~~~~~~----- 181 (292)
T TIGR03448 113 AARALASRLGLVPTRELLQMRRPLRDLELPEPQVPDGVTVRAYVGAPDDAEWLRVNNAA------FAWHPEQGGW----- 181 (292)
T ss_pred HHHHHHHHCCCEEccEEEEEEecCCccccCCCCCCCCeEeeccCCCcchHHHHHHHHHH------hhCCCccCCc-----
Confidence 46677777777665544443222211111222235688998853345777777776544 1110000122
Q ss_pred CHHHHHHHhhcccceeeeecccccCccccccccccccccCCcceEEEEEeeCCeEEEEEEEEec--CCceEEEEEEeeCC
Q 025518 85 DIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD--VGLTASIHDIMVIP 162 (251)
Q Consensus 85 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~v~va~~~g~iVG~~~~~~d--~~~~~~I~~l~V~p 162 (251)
+.+.+......... .+...++++.+.++++|||+.+... .....+|..++|+|
T Consensus 182 ~~~~~~~~~~~~~~-------------------------~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~V~p 236 (292)
T TIGR03448 182 TRADLAERRAEPWF-------------------------DPAGLFLAFDDAPGELLGFHWTKVHPDEPALGEVYVVGVDP 236 (292)
T ss_pred CHHHHHHHhhCcCC-------------------------CcCceEEEEECCCCcEEEEEEEEecCCCCceeEEEEEEECH
Confidence 22333322211100 0112223332226899999754332 22346777889999
Q ss_pred CcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 163 SLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 163 ~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+|||+|||+.|++.+++++++.|+..+.+.+ |..+.+||+|+||+...
T Consensus 237 ~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 287 (292)
T TIGR03448 237 AAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAE 287 (292)
T ss_pred HHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEcc
Confidence 9999999999999999999999999988887 56788999999999754
No 18
>PRK07757 acetyltransferase; Provisional
Probab=99.44 E-value=3.4e-12 Score=103.07 Aligned_cols=99 Identities=23% Similarity=0.233 Sum_probs=74.6
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeecCce
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDILGST 214 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~~~~ 214 (251)
+++++||++.+........+|..++|+|+|||+|+|++|++.+++.+.+.|+..+.+.+. +.+||+|+||+.......
T Consensus 48 ~~~~lvG~~~l~~~~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~GF~~~~~~~~ 125 (152)
T PRK07757 48 EEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKLGFREVDKEAL 125 (152)
T ss_pred ECCEEEEEEEEEeccCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHCCCEEcccccC
Confidence 479999999887655556789999999999999999999999999999899988876653 468999999999653111
Q ss_pred -eeE----EeccCCCCCCChHHHHhh
Q 025518 215 -TMM----YAKTASTGFGGSQMVKRA 235 (251)
Q Consensus 215 -~~~----~~~~~~~~~~~~~~v~~~ 235 (251)
+-+ ........|+...||+..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (152)
T PRK07757 126 PQKVWADCIKCPKFPNCDEIAMIKEL 151 (152)
T ss_pred ChhHHhcCccCCCCCCcchhhhhhhc
Confidence 111 223334555666666543
No 19
>PLN02825 amino-acid N-acetyltransferase
Probab=99.42 E-value=2.8e-13 Score=130.34 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=85.6
Q ss_pred EEEEeeCCeEEEEEEEEec-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeE
Q 025518 130 VPVTPSNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGN 208 (251)
Q Consensus 130 v~va~~~g~iVG~~~~~~d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~ 208 (251)
+.+++.||++|||+.+... .....+|..|+|+|+|||+|+|++||+++++.++++|+..|.+.++ .+.+||+++||+.
T Consensus 409 f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt-~a~~fY~k~GF~~ 487 (515)
T PLN02825 409 FVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT-RTADWFVRRGFSE 487 (515)
T ss_pred EEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC-cHHHHHHHCCCEE
Confidence 4556678999999987543 2346789999999999999999999999999999999999999874 5688999999999
Q ss_pred eecCceeeEEeccCCCCCCChHHHHh
Q 025518 209 DILGSTTMMYAKTASTGFGGSQMVKR 234 (251)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~v~~ 234 (251)
..........+..++....++.+||.
T Consensus 488 ~~~~~lp~~~~~~yn~~r~sk~~~k~ 513 (515)
T PLN02825 488 CSIESLPEARRKRINLSRGSKYYMKK 513 (515)
T ss_pred eChhhCCHHHHhhcCccCCcEEEEEe
Confidence 87666666666677766677777664
No 20
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.42 E-value=2.1e-12 Score=101.02 Aligned_cols=72 Identities=25% Similarity=0.386 Sum_probs=58.5
Q ss_pred eCCeEEEEEEEEe-----cCC--ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCe
Q 025518 135 SNGQLVGFGRAVS-----DVG--LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFG 207 (251)
Q Consensus 135 ~~g~iVG~~~~~~-----d~~--~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~ 207 (251)
++++|||++.+.. .+. ...+|..++|+|+|||+|+|++|++++++.+++.|+..+.+.. ...+||+|+||+
T Consensus 48 ~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~~Y~~~G~~ 125 (127)
T PF13527_consen 48 DDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPPFYRRFGFE 125 (127)
T ss_dssp ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHHHHHHTTEE
T ss_pred ECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChhhhhcCCCE
Confidence 5899999998743 222 2678999999999999999999999999999999988776665 457899999998
Q ss_pred E
Q 025518 208 N 208 (251)
Q Consensus 208 ~ 208 (251)
.
T Consensus 126 ~ 126 (127)
T PF13527_consen 126 Y 126 (127)
T ss_dssp E
T ss_pred E
Confidence 5
No 21
>PRK10314 putative acyltransferase; Provisional
Probab=99.42 E-value=1.3e-12 Score=107.11 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=65.8
Q ss_pred eCCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhC-CCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-EIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~-gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
+++++||++++...+ ....+|.+|+|+|+|||+|||++||++++++++.. +...+.+.++..+..||+|+||+..+
T Consensus 55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g 133 (153)
T PRK10314 55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVT 133 (153)
T ss_pred ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECC
Confidence 588999999987643 23578999999999999999999999999998764 66778888888888999999999865
No 22
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.42 E-value=6.8e-12 Score=100.77 Aligned_cols=75 Identities=21% Similarity=0.395 Sum_probs=64.4
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+++++||++.+.... ....+..++|+|+|||+|+|+.+++.+++.+++.++..+.+.+ |..+.+||+|+||+..+
T Consensus 47 ~~~~~vG~~~~~~~~-~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~ 124 (146)
T PRK09491 47 VNGQMAAFAITQVVL-DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVT 124 (146)
T ss_pred ECCeEEEEEEEEeec-CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEee
Confidence 478999999775432 2456888999999999999999999999999889998888887 66788899999999765
No 23
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.42 E-value=3.4e-12 Score=104.21 Aligned_cols=74 Identities=24% Similarity=0.329 Sum_probs=64.9
Q ss_pred CeEEEEEEEEecCC---ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 137 GQLVGFGRAVSDVG---LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 137 g~iVG~~~~~~d~~---~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+..||.+....+.. ..++|..++|+++|||+|||++|++.+++.++++|+..|.|.+ |..|.+||+++||+.+.
T Consensus 66 ~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~ 145 (165)
T KOG3139|consen 66 GDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDK 145 (165)
T ss_pred CceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEec
Confidence 33688887655433 3599999999999999999999999999999999999999998 67899999999999864
No 24
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.41 E-value=3.2e-12 Score=101.51 Aligned_cols=79 Identities=22% Similarity=0.450 Sum_probs=70.0
Q ss_pred EEeeCCeEEEEEEEEe------cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCC
Q 025518 132 VTPSNGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACG 205 (251)
Q Consensus 132 va~~~g~iVG~~~~~~------d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~G 205 (251)
++.+.+++||.+.+.- .-+....|.+|+|++++||++||+.|+..+++.+++.|+..+.|.|.+.+..||+|||
T Consensus 59 ed~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG 138 (150)
T KOG3396|consen 59 EDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCG 138 (150)
T ss_pred EeCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcC
Confidence 3345689999998753 3345678999999999999999999999999999999999999999999999999999
Q ss_pred CeEee
Q 025518 206 FGNDI 210 (251)
Q Consensus 206 F~~~~ 210 (251)
|....
T Consensus 139 ~s~~~ 143 (150)
T KOG3396|consen 139 YSNAG 143 (150)
T ss_pred ccccc
Confidence 99765
No 25
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.40 E-value=2e-12 Score=116.90 Aligned_cols=91 Identities=15% Similarity=0.299 Sum_probs=73.7
Q ss_pred eEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCe
Q 025518 128 RVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFG 207 (251)
Q Consensus 128 ~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~ 207 (251)
+.+.+.++++++||++.+.. ..|..|+|+|+|||+|+|++||+++++++++.|+..+.+.++..+..||+|+||+
T Consensus 6 ~~~~v~~~~~~iVG~~~l~~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~ 80 (297)
T cd02169 6 YTVGIFDDAGELIATGSIAG-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFK 80 (297)
T ss_pred EEEEEEEECCEEEEEEEecc-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCE
Confidence 44555556799999997753 2588999999999999999999999999999999999999988889999999999
Q ss_pred Eee-cCceeeEEeccCC
Q 025518 208 NDI-LGSTTMMYAKTAS 223 (251)
Q Consensus 208 ~~~-~~~~~~~~~~~~~ 223 (251)
... .......+..+.+
T Consensus 81 ~~~~~~~~~~~~~~gi~ 97 (297)
T cd02169 81 ELANASDEAVLLENGKP 97 (297)
T ss_pred EecccCCeeeEecCCch
Confidence 865 2232244545544
No 26
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.40 E-value=2.6e-11 Score=98.08 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=62.0
Q ss_pred eeCCeEEEEEEEEecC----CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCC
Q 025518 134 PSNGQLVGFGRAVSDV----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACG 205 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~----~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~G 205 (251)
+.+|++||++.+.... .....+ .++|+|+|||+|||+.|++.+++++.+ .++..+.+.+ |..+.+||+|+|
T Consensus 57 ~~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~G 135 (162)
T PRK10140 57 CIDGDVVGHLTIDVQQRPRRSHVADF-GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYG 135 (162)
T ss_pred EECCEEEEEEEEecccccccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCC
Confidence 3578999999875321 112222 489999999999999999999999977 6888888877 678889999999
Q ss_pred CeEeec
Q 025518 206 FGNDIL 211 (251)
Q Consensus 206 F~~~~~ 211 (251)
|+..+.
T Consensus 136 F~~~g~ 141 (162)
T PRK10140 136 FEIEGT 141 (162)
T ss_pred CEEEee
Confidence 998763
No 27
>PRK09831 putative acyltransferase; Provisional
Probab=99.37 E-value=4e-12 Score=102.63 Aligned_cols=71 Identities=23% Similarity=0.346 Sum_probs=58.9
Q ss_pred EEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 131 PVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 131 ~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
+++.++|++||++.+.. .++..++|+|++||+|||++||+++++.+.. +.+.++..+.+||+|+||+..+
T Consensus 56 ~v~~~~~~iiG~~~~~~-----~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~g 125 (147)
T PRK09831 56 RVAVINAQPVGFITCIE-----HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTVK 125 (147)
T ss_pred EEEEECCEEEEEEEehh-----ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEee
Confidence 34456899999997642 4678899999999999999999999998865 4556677889999999999876
Q ss_pred c
Q 025518 211 L 211 (251)
Q Consensus 211 ~ 211 (251)
.
T Consensus 126 ~ 126 (147)
T PRK09831 126 Q 126 (147)
T ss_pred c
Confidence 3
No 28
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.33 E-value=1.2e-11 Score=122.13 Aligned_cols=77 Identities=21% Similarity=0.227 Sum_probs=66.7
Q ss_pred EEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 132 VTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 132 va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
+++++|++|||+.+...+....+|+.++|+|+|||+|||++||+++++++++.|+..|.+.+. +..||+|+||+...
T Consensus 507 Va~~~g~IVG~~~l~~~~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~GF~~~~ 583 (614)
T PRK12308 507 VAEHHGEVTGCASLYIYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQGFSPTS 583 (614)
T ss_pred EEEECCEEEEEEEEEEcCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHCCCEECC
Confidence 344589999999876654556789999999999999999999999999999999999888763 56899999999865
No 29
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.33 E-value=3.3e-11 Score=97.24 Aligned_cols=87 Identities=20% Similarity=0.285 Sum_probs=67.5
Q ss_pred EEeeCCeEEEEEEEEec-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHH-HhCCCcEEEEEe---cHhHHHHHHHCCC
Q 025518 132 VTPSNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAALC---SEEERLFFEACGF 206 (251)
Q Consensus 132 va~~~g~iVG~~~~~~d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~-~~~gi~~I~l~~---~~~a~~fYek~GF 206 (251)
+.+++|++||++.+..- .........+.|.|++|++|+|+.|+..+++++ .+.|+..|.+.+ |..+.+||+++||
T Consensus 55 v~~~~g~iiG~~~~~~~~~~~~~~~~~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF 134 (155)
T PF13420_consen 55 VAEEDGKIIGYVSLRDIDPYNHTAELSIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGF 134 (155)
T ss_dssp EEECTTEEEEEEEEEESSSGTTEEEEEEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTE
T ss_pred EEEcCCcEEEEEEEEeeeccCCEEEEeeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCC
Confidence 33358999999988642 223333444888899999999999999999999 999999999887 7788999999999
Q ss_pred eEeecCceeeEE
Q 025518 207 GNDILGSTTMMY 218 (251)
Q Consensus 207 ~~~~~~~~~~~~ 218 (251)
+..+.......+
T Consensus 135 ~~~g~~~~~~~~ 146 (155)
T PF13420_consen 135 EEEGELKDHIFI 146 (155)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEecEEEE
Confidence 998744443433
No 30
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.32 E-value=1.9e-11 Score=99.64 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=72.1
Q ss_pred eCCeEEEEEEEE-ecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeecCc
Q 025518 135 SNGQLVGFGRAV-SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDILGS 213 (251)
Q Consensus 135 ~~g~iVG~~~~~-~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~~~ 213 (251)
.+|+++||+.+. ...+..+.+..|+|+|++||+|+|..|+++++..+++.|+..+.+.++ .+..||+++||+..+.+.
T Consensus 47 ~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~GF~~vd~~~ 125 (153)
T COG1246 47 RDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAERGFTRVDKDE 125 (153)
T ss_pred eCCcEEEEEeecccCccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHcCCeECcccc
Confidence 489999999988 356778899999999999999999999999999999999999999976 678899999999976444
Q ss_pred eeeEE
Q 025518 214 TTMMY 218 (251)
Q Consensus 214 ~~~~~ 218 (251)
.....
T Consensus 126 LP~~~ 130 (153)
T COG1246 126 LPEEV 130 (153)
T ss_pred CCHHH
Confidence 44333
No 31
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.32 E-value=8.2e-12 Score=118.32 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=66.3
Q ss_pred EeeCCeEEEEEEEEec-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeec
Q 025518 133 TPSNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDIL 211 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~ 211 (251)
++++++++||+.+... ....++|..++|+|+|||+|+|++||++++++++++|+..+.+.++ ++.+||+|+||+..+.
T Consensus 327 ~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 327 IEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRERGFQTASV 405 (429)
T ss_pred EEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHCCCEECCh
Confidence 3458999999987653 3346789999999999999999999999999999999998876643 4678999999998764
Q ss_pred C
Q 025518 212 G 212 (251)
Q Consensus 212 ~ 212 (251)
.
T Consensus 406 ~ 406 (429)
T TIGR01890 406 D 406 (429)
T ss_pred h
Confidence 3
No 32
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.31 E-value=3.6e-11 Score=109.73 Aligned_cols=126 Identities=14% Similarity=0.194 Sum_probs=95.0
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
++|+.. ...|.+.+.+|....+. |.. +....+.+++...+.+.. .+.+
T Consensus 187 ~~Ir~a-~~~Dl~ri~~L~~~tnq----fn~-------~~~~~s~~~i~~~l~~~~-~~~~------------------- 234 (320)
T TIGR01686 187 LNISKN-DEQNVQRVEELLGRTNQ----FNA-------TYTRLNQEDVAQHMQKEE-IVTV------------------- 234 (320)
T ss_pred EEEEEC-ChhhhHHHHHHHHhHHh----hhc-------cCccCCHHHHHHHhcCCC-EEEE-------------------
Confidence 789995 89999999999986642 321 113446678888876652 1111
Q ss_pred ccCCcceEEEEEe--eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-----c
Q 025518 122 LGNLAQRVVPVTP--SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-----S 194 (251)
Q Consensus 122 ~~~~~~~~v~va~--~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-----~ 194 (251)
.+.+ .++.+||++.+... ....+|..++|+|++||+|||++||+++++.+++.|+..|.+.+ |
T Consensus 235 ---------~~~d~~gd~givG~~~~~~~-~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N 304 (320)
T TIGR01686 235 ---------SMSDRFGDSGIIGIFVFEKK-EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERN 304 (320)
T ss_pred ---------EEEecCCCCceEEEEEEEec-CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCc
Confidence 1111 25789999976443 44678999999999999999999999999999999999888865 6
Q ss_pred HhHHHHHHHCCCeEe
Q 025518 195 EEERLFFEACGFGND 209 (251)
Q Consensus 195 ~~a~~fYek~GF~~~ 209 (251)
..+..||+++||+..
T Consensus 305 ~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 305 MPFLSFYEQIGFEDE 319 (320)
T ss_pred hHHHHHHHHcCCccC
Confidence 678889999999853
No 33
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.30 E-value=6.6e-12 Score=119.30 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=74.4
Q ss_pred EeeCCeEEEEEEEEec-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeec
Q 025518 133 TPSNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDIL 211 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~ 211 (251)
+++++++|||+.+... .....+|..|+|+|+|||+|+|++||+++++++++.|+..+.+.+ ..+.+||+|+||+....
T Consensus 339 a~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 339 IERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLERGFVPVDV 417 (441)
T ss_pred EEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHHCcCEECCh
Confidence 3458999999976543 234678999999999999999999999999999999999887654 56788999999998764
Q ss_pred CceeeEEeccCCCCCCChHHH
Q 025518 212 GSTTMMYAKTASTGFGGSQMV 232 (251)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~v 232 (251)
..........+....+++.++
T Consensus 418 ~~~~~~~~~~y~~~r~~~~~~ 438 (441)
T PRK05279 418 DDLPEAKRQLYNYQRRSKVLV 438 (441)
T ss_pred hhCcHHHHHhhCcccCceeee
Confidence 433333333333333444443
No 34
>PRK10514 putative acetyltransferase; Provisional
Probab=99.29 E-value=3.8e-11 Score=95.92 Aligned_cols=66 Identities=26% Similarity=0.446 Sum_probs=53.1
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+++++||++.+.. .++..++|+|+|||+|+|++|++++++.+. ++.+.+ |..+.+||+|+||+..+
T Consensus 57 ~~~~~iG~~~~~~-----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~-----~i~~~v~~~N~~a~~~yek~Gf~~~~ 125 (145)
T PRK10514 57 ERDQPVGFMLLSG-----GHMEALFVDPDVRGCGVGRMLVEHALSLHP-----ELTTDVNEQNEQAVGFYKKMGFKVTG 125 (145)
T ss_pred cCCcEEEEEEEec-----CcEeEEEECHHhccCCHHHHHHHHHHHhcc-----ccEEEeecCCHHHHHHHHHCCCEEec
Confidence 4789999997632 346689999999999999999999998753 334444 67889999999999865
No 35
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.28 E-value=8.9e-11 Score=96.46 Aligned_cols=73 Identities=26% Similarity=0.327 Sum_probs=62.5
Q ss_pred eEEEEEEEE-ecCC----ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCC-cEEEEEe---cHhHHHHHHHCCCeE
Q 025518 138 QLVGFGRAV-SDVG----LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREI-YDIAALC---SEEERLFFEACGFGN 208 (251)
Q Consensus 138 ~iVG~~~~~-~d~~----~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi-~~I~l~~---~~~a~~fYek~GF~~ 208 (251)
+++||+... ..+. ...+|..|+|+|+|||+|||++|++.+++.+.+.+. ..+.+.+ |..+++||+|+||+.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~ 151 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence 699999873 3332 278899999999999999999999999999998886 7888887 667889999999998
Q ss_pred ee
Q 025518 209 DI 210 (251)
Q Consensus 209 ~~ 210 (251)
..
T Consensus 152 ~~ 153 (177)
T COG0456 152 VK 153 (177)
T ss_pred Ee
Confidence 65
No 36
>PHA01807 hypothetical protein
Probab=99.26 E-value=6.7e-11 Score=97.30 Aligned_cols=72 Identities=17% Similarity=0.277 Sum_probs=58.2
Q ss_pred EeeCCeEEEEEEEEecCCc-eEE---EEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHC
Q 025518 133 TPSNGQLVGFGRAVSDVGL-TAS---IHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEAC 204 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d~~~-~~~---I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~ 204 (251)
+..+|++||++.+...... ... +..|+|+|+|||+|||++||+.+++++++.|+..|.+.+ |..+.+||++.
T Consensus 58 a~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 58 VFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred EEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 3458999999987544322 222 445799999999999999999999999999999999988 45677899984
No 37
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=1.8e-10 Score=95.87 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=94.7
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
+.||.. ...|.+.|.++|+..--+.+ --|..++.+.+...+.+....
T Consensus 2 ~~ir~~-~~~Dl~~I~~IY~~~v~~~~--------a~~e~~~~~~~~~~~~~~~~~------------------------ 48 (169)
T COG1247 2 MEIRPA-TAADLEAILEIYNGAVENTA--------ATFEEDPVSLEERAAWFSGRT------------------------ 48 (169)
T ss_pred cEEecC-hHHhHHHHHHHHHHhhhcce--------EEEeccCCCHHHHHHHHHhcc------------------------
Confidence 567775 88999999999984411100 122335667777776444321
Q ss_pred ccCCcceEEEEEe-eCCeEEEEEEEEecC---Cc-eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---
Q 025518 122 LGNLAQRVVPVTP-SNGQLVGFGRAVSDV---GL-TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC--- 193 (251)
Q Consensus 122 ~~~~~~~~v~va~-~~g~iVG~~~~~~d~---~~-~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~--- 193 (251)
..++.++|+. ++|+++|++.+..-. .+ ...-.-|+|+|+.||+|||++|++.+++.+...|+..+...+
T Consensus 49 ---~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~ 125 (169)
T COG1247 49 ---RDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESD 125 (169)
T ss_pred ---cCCceEEEEEcCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCC
Confidence 1223445554 349999999874422 22 334456999999999999999999999999999998887776
Q ss_pred cHhHHHHHHHCCCeEee
Q 025518 194 SEEERLFFEACGFGNDI 210 (251)
Q Consensus 194 ~~~a~~fYek~GF~~~~ 210 (251)
|....+|.+++||+..+
T Consensus 126 n~aSi~lh~~~GF~~~G 142 (169)
T COG1247 126 NLASIALHEKLGFEEVG 142 (169)
T ss_pred CcHhHHHHHHCCCEEec
Confidence 66778899999999965
No 38
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.25 E-value=7.2e-11 Score=108.40 Aligned_cols=74 Identities=18% Similarity=0.307 Sum_probs=66.0
Q ss_pred EeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeec
Q 025518 133 TPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDIL 211 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~ 211 (251)
+.++|++||++.+..+ .|..|+|+|+|||+|+|++||.++++.+++.|+..+.+.+.+.+.+||+++||.....
T Consensus 36 ~~~~~~lVg~g~l~g~-----~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i~~ 109 (332)
T TIGR00124 36 VYEDEEIIGCGGIAGN-----VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYCGFKTLAE 109 (332)
T ss_pred EEECCEEEEEEEEecC-----EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHcCCEEeee
Confidence 3468899999987532 4889999999999999999999999999999999999999888889999999999654
No 39
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.21 E-value=2.4e-10 Score=95.39 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=89.7
Q ss_pred ceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccc
Q 025518 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (251)
Q Consensus 41 ~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 120 (251)
.+.||.. .+.|.+.+.++..++ |.++ ...++-..+..+....
T Consensus 3 ~~~ir~e-~~~d~~~i~~~~~~a------F~~~-----------~e~~~v~~lR~~~~~~-------------------- 44 (171)
T COG3153 3 MMLIRTE-TPADIPAIEALTREA------FGPG-----------REAKLVDKLREGGRPD-------------------- 44 (171)
T ss_pred ccEEEec-ChhhHHHHHHHHHHH------hhcc-----------hHHHHHHHHHhcCCcc--------------------
Confidence 5778885 889999999999877 3210 1222222222222111
Q ss_pred cccCCcceEEEEEeeCCeEEEEEEEEe---c--CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecH
Q 025518 121 LLGNLAQRVVPVTPSNGQLVGFGRAVS---D--VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (251)
Q Consensus 121 ~~~~~~~~~v~va~~~g~iVG~~~~~~---d--~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~ 195 (251)
-.+.+||.++|++||.+.+.. . ...-.-+..|+|+|++||||||++|++..++.++..|...+.+.
T Consensus 45 ------~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vl--- 115 (171)
T COG3153 45 ------LTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVL--- 115 (171)
T ss_pred ------cceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEe---
Confidence 112455656799999998632 1 22345577899999999999999999999999999999999888
Q ss_pred hHHHHHHHCCCeEeecC
Q 025518 196 EERLFFEACGFGNDILG 212 (251)
Q Consensus 196 ~a~~fYek~GF~~~~~~ 212 (251)
....||.|+||+.....
T Consensus 116 Gdp~YY~rfGF~~~~~~ 132 (171)
T COG3153 116 GDPTYYSRFGFEPAAGA 132 (171)
T ss_pred cCcccccccCcEEcccc
Confidence 67789999999986633
No 40
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.20 E-value=3.2e-10 Score=101.24 Aligned_cols=73 Identities=19% Similarity=0.332 Sum_probs=58.7
Q ss_pred eeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 134 PSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
.+++++||++.+.........+..++|+|+|||+|||++||+.+++.+. ..+.+.+ |..+++||+++||+...
T Consensus 52 ~~~~~~vG~~~~~~~~~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~ 127 (292)
T TIGR03448 52 VDSDPIVGYANLVPARGTDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTR 127 (292)
T ss_pred EECCEEEEEEEEEcCCCCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEcc
Confidence 3578999999876643444678899999999999999999999999864 2344555 46789999999999754
No 41
>PRK10562 putative acetyltransferase; Provisional
Probab=99.18 E-value=4.2e-10 Score=90.38 Aligned_cols=67 Identities=21% Similarity=0.384 Sum_probs=54.2
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+++++||++.+... ..+..++|+|+|||+|+|+.|++++++.+ ..+.+.+ |..+.+||+|+||+..+
T Consensus 55 ~~~~~iG~~~~~~~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~ 124 (145)
T PRK10562 55 EDGKLLGFVSVLEG----RFVGALFVAPKAVRRGIGKALMQHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVD 124 (145)
T ss_pred ECCEEEEEEEEeec----cEEEEEEECHHHcCCCHHHHHHHHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEcc
Confidence 47899999987543 35778999999999999999999998853 3444544 66788999999999864
No 42
>PRK13688 hypothetical protein; Provisional
Probab=99.16 E-value=3e-10 Score=93.66 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=55.1
Q ss_pred EeeCCeEEEEEEEEec----------CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHH
Q 025518 133 TPSNGQLVGFGRAVSD----------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFE 202 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d----------~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYe 202 (251)
+.+++++||++.+... .....+|+.|+|+|+|||+|||++|++.+.+ .++. +.+..+..+.+||+
T Consensus 50 ~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~----~~~~-~~~~~~~~a~~FY~ 124 (156)
T PRK13688 50 IYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKS----FQLP-IKTIARNKSKDFWL 124 (156)
T ss_pred EEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHH----hCCe-EEEEeccchHHHHH
Confidence 3457899999876432 2345789999999999999999999986543 3443 44445556789999
Q ss_pred HCCCeEee
Q 025518 203 ACGFGNDI 210 (251)
Q Consensus 203 k~GF~~~~ 210 (251)
|+||+...
T Consensus 125 k~GF~~~~ 132 (156)
T PRK13688 125 KLGFTPVE 132 (156)
T ss_pred hCCCEEeE
Confidence 99999865
No 43
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.14 E-value=1.6e-09 Score=89.92 Aligned_cols=142 Identities=11% Similarity=0.042 Sum_probs=91.7
Q ss_pred CCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccc
Q 025518 39 MIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLM 118 (251)
Q Consensus 39 ~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.+.+|. ....|.+.+.+++.........+.. |.....++++.++.+.+.... ..
T Consensus 8 t~rl~Lr~-~~~~D~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~---~~-------------- 63 (179)
T PRK10151 8 SESLELHA-VDESHVTPLHQLVCKNKTWLQQSLN------WPQFVQSEEDTRKTVQGNVML---HQ-------------- 63 (179)
T ss_pred CCcEEEEe-CCHHHHHHHHHHHHHhHHHHHhcCC------CcCccCCHHHHHHHHHHHHHH---Hh--------------
Confidence 34688888 4888999999988432110001111 222334666666666543110 00
Q ss_pred cccccCCcceEEEEEeeCCeEEEEEEEEe-cC-CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe--
Q 025518 119 VPLLGNLAQRVVPVTPSNGQLVGFGRAVS-DV-GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC-- 193 (251)
Q Consensus 119 ~e~~~~~~~~~v~va~~~g~iVG~~~~~~-d~-~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~-- 193 (251)
+.....+++ ..+|++||++.+.. +. ...+.| .+.|+|+|||+|+|+.+++.+++++.+ .++.+|.+.+
T Consensus 64 -----~~~~~~~~i-~~~~~~iG~~~l~~~~~~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~ 136 (179)
T PRK10151 64 -----RGYAKMFMI-FKEDELIGVLSFNRIEPLNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRV 136 (179)
T ss_pred -----cCCcEEEEE-EECCEEEEEEEEEeeccCCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcC
Confidence 011111222 23789999998743 21 224555 467999999999999999999999964 5799988887
Q ss_pred -cHhHHHHHHHCCCeEeec
Q 025518 194 -SEEERLFFEACGFGNDIL 211 (251)
Q Consensus 194 -~~~a~~fYek~GF~~~~~ 211 (251)
|....++|+|+||+..+.
T Consensus 137 ~N~~S~~v~ek~Gf~~~g~ 155 (179)
T PRK10151 137 DNPASNQVALRNGFTLEGC 155 (179)
T ss_pred CCHHHHHHHHHCCCEEEeE
Confidence 667888999999998763
No 44
>PRK01346 hypothetical protein; Provisional
Probab=99.13 E-value=7e-10 Score=104.14 Aligned_cols=75 Identities=21% Similarity=0.240 Sum_probs=62.5
Q ss_pred eeCCeEEEEEEEEec------C--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCC
Q 025518 134 PSNGQLVGFGRAVSD------V--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACG 205 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d------~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~G 205 (251)
.+++++||++.+... + ....+|..|+|+|+|||+|||++||+++++.+++.|+..+.+.+.. .+||+|+|
T Consensus 53 ~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~r~G 130 (411)
T PRK01346 53 FDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYGRFG 130 (411)
T ss_pred EECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHhhCC
Confidence 358899999987532 1 1357899999999999999999999999999999998777777644 47999999
Q ss_pred CeEee
Q 025518 206 FGNDI 210 (251)
Q Consensus 206 F~~~~ 210 (251)
|....
T Consensus 131 f~~~~ 135 (411)
T PRK01346 131 YGPAT 135 (411)
T ss_pred Ceecc
Confidence 99854
No 45
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.11 E-value=1.6e-09 Score=87.44 Aligned_cols=77 Identities=18% Similarity=0.310 Sum_probs=61.4
Q ss_pred eeCCeEEEEEEEEe------cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhC-CCcEEEEEe---cHhHHHHHHH
Q 025518 134 PSNGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-EIYDIAALC---SEEERLFFEA 203 (251)
Q Consensus 134 ~~~g~iVG~~~~~~------d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~-gi~~I~l~~---~~~a~~fYek 203 (251)
..+|+++||+.+.. -......++.++|++++||+|+|+.+++.+++.+.+. ++..|.+.+ |..++++|+|
T Consensus 54 ~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k 133 (152)
T PF13523_consen 54 EDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEK 133 (152)
T ss_dssp EETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHH
T ss_pred EECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHH
Confidence 35899999998854 1234566888999999999999999999999999765 788999998 5677789999
Q ss_pred CCCeEee
Q 025518 204 CGFGNDI 210 (251)
Q Consensus 204 ~GF~~~~ 210 (251)
+||+..+
T Consensus 134 ~GF~~~g 140 (152)
T PF13523_consen 134 AGFRKVG 140 (152)
T ss_dssp TT-EEEE
T ss_pred cCCEEee
Confidence 9999976
No 46
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.09 E-value=5.4e-09 Score=87.92 Aligned_cols=77 Identities=14% Similarity=0.199 Sum_probs=61.7
Q ss_pred eeCCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCCCe
Q 025518 134 PSNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACGFG 207 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~GF~ 207 (251)
.+++++||.+.+..-. ......-.+.|+|+|||+|+|+.+++.+++++.+ .|+..|.+.| |..+.++|+|+||+
T Consensus 83 ~~~~~~iG~i~l~~~~~~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~ 162 (194)
T PRK10809 83 PDEKEIIGVANFSNVVRGSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFE 162 (194)
T ss_pred CCCCeEEEEEEEEeecCCCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCc
Confidence 3468999999875321 2122223578999999999999999999999966 6999999998 67788899999999
Q ss_pred Eee
Q 025518 208 NDI 210 (251)
Q Consensus 208 ~~~ 210 (251)
..+
T Consensus 163 ~~g 165 (194)
T PRK10809 163 KEG 165 (194)
T ss_pred EEe
Confidence 765
No 47
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.09 E-value=3.7e-09 Score=83.43 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=87.6
Q ss_pred ceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccc
Q 025518 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (251)
Q Consensus 41 ~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 120 (251)
+++++.. .+.|.+.+.+++..... ..|.. |.....+.++..+.+.+.......
T Consensus 1 Rl~lr~~-~~~D~~~i~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------------------ 53 (142)
T PF13302_consen 1 RLTLRPL-TPEDADAIYEWRSDPEI--RRYLP------WGPPWPTLEEAEEWIQSRQDSWEN------------------ 53 (142)
T ss_dssp SEEEEE--HGGGHHHHHHHHTTTTH--CTTSS------TTTSSSSHHHHHHHHHHHHHCHHE------------------
T ss_pred CEEEEcC-CHHHHHHHHHHhcCHHH--HHhcC------CCCCCCCHHHHHHHHHHhhhhhhc------------------
Confidence 4678884 78899999999842211 12221 122222666666666520000000
Q ss_pred cccCCcceEEEEEeeCCeEEEEEEEEec--CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHH-HhCCCcEEEEEe---c
Q 025518 121 LLGNLAQRVVPVTPSNGQLVGFGRAVSD--VGLTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAALC---S 194 (251)
Q Consensus 121 ~~~~~~~~~v~va~~~g~iVG~~~~~~d--~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~-~~~gi~~I~l~~---~ 194 (251)
.....+++...+++++||++.+... ....+.+. +.|.|++||+|+|+.++..+++++ ...++..|...+ |
T Consensus 54 ---~~~~~~~i~~~~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N 129 (142)
T PF13302_consen 54 ---HGYYYFAIEDKDDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADN 129 (142)
T ss_dssp ---ETEEEEEEEETTTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-
T ss_pred ---ccceEEEEEeccCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCC
Confidence 0011122333345689999998432 34456664 889999999999999999999999 688999999988 6
Q ss_pred HhHHHHHHHCCCe
Q 025518 195 EEERLFFEACGFG 207 (251)
Q Consensus 195 ~~a~~fYek~GF~ 207 (251)
..+.++++|+||+
T Consensus 130 ~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 130 EASRRLLEKLGFE 142 (142)
T ss_dssp HHHHHHHHHTT-E
T ss_pred HHHHHHHHHcCCC
Confidence 6778899999996
No 48
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.09 E-value=1.9e-09 Score=89.96 Aligned_cols=76 Identities=14% Similarity=0.224 Sum_probs=61.9
Q ss_pred eCCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHH-hCCCcEEEEEe---cHhHHHHHHHCCCeE
Q 025518 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT-SREIYDIAALC---SEEERLFFEACGFGN 208 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~-~~gi~~I~l~~---~~~a~~fYek~GF~~ 208 (251)
.+|++||++.+.... ...+.+ .++|+|+|||+|+|+.+++.+++++. ..++..|.+.+ |..+.+||+|+||+.
T Consensus 64 ~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~ 142 (186)
T PRK15130 64 CDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEV 142 (186)
T ss_pred ECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEE
Confidence 479999999875422 123334 59999999999999999999999985 56898898887 667889999999998
Q ss_pred eec
Q 025518 209 DIL 211 (251)
Q Consensus 209 ~~~ 211 (251)
.+.
T Consensus 143 ~~~ 145 (186)
T PRK15130 143 EGE 145 (186)
T ss_pred EEE
Confidence 753
No 49
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.04 E-value=1.4e-09 Score=91.12 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=64.3
Q ss_pred CCeEEEEEEEEe---cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEe
Q 025518 136 NGQLVGFGRAVS---DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGND 209 (251)
Q Consensus 136 ~g~iVG~~~~~~---d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~ 209 (251)
.+++|||..+-. -+....|+..|-|.+.|||+|||+.||+.+...+.......|.|.+ |..+..||+++||..+
T Consensus 101 ~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~ 180 (202)
T KOG2488|consen 101 KSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVD 180 (202)
T ss_pred CCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccC
Confidence 348999998733 2344788999999999999999999999999999888888888888 6788889999999987
Q ss_pred e
Q 025518 210 I 210 (251)
Q Consensus 210 ~ 210 (251)
.
T Consensus 181 ~ 181 (202)
T KOG2488|consen 181 E 181 (202)
T ss_pred C
Confidence 5
No 50
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=98.95 E-value=1.4e-08 Score=81.65 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=61.9
Q ss_pred eeCCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCCCe
Q 025518 134 PSNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACGFG 207 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~GF~ 207 (251)
.++|++||++.+.... .....+ .++++|.+| +|+|+.++..+++++.+ .++..|.+.| |..+++||+|+||+
T Consensus 57 ~~~g~~vG~~~~~~~~~~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~ 134 (156)
T TIGR03585 57 CQESRPIGVISFTDINLVHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFE 134 (156)
T ss_pred EECCEEEEEEEEEecChhhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCe
Confidence 3589999999886433 223444 355999999 99999999999999864 6999998887 77888999999999
Q ss_pred EeecC
Q 025518 208 NDILG 212 (251)
Q Consensus 208 ~~~~~ 212 (251)
..+..
T Consensus 135 ~~g~~ 139 (156)
T TIGR03585 135 REGVF 139 (156)
T ss_pred Eeeee
Confidence 87633
No 51
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.92 E-value=1.4e-08 Score=75.39 Aligned_cols=70 Identities=23% Similarity=0.287 Sum_probs=52.0
Q ss_pred CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
.+++++.+... + ...|..|+|+|+|||+|+|+.++..+.+.+.+.|..- .+.+ |..+.+||+|+||+...
T Consensus 9 ~~~l~~~~~~~-~---~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~-~l~v~~~N~~s~~ly~klGf~~~~ 81 (86)
T PF08445_consen 9 LVALVAWIIRS-D---DGEIGGVYTLPEHRRRGLGSALVAALARELLERGKTP-FLYVDADNEASIRLYEKLGFREIE 81 (86)
T ss_dssp CEEEEEEEEES-C---TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEE-EEEEETT-HHHHHHHHHCT-EEEE
T ss_pred ccceeeEeeeC-C---CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcE-EEEEECCCHHHHHHHHHcCCEEEE
Confidence 35666655322 2 2678899999999999999999999999998888643 3443 66788999999999864
No 52
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.89 E-value=4.9e-09 Score=86.79 Aligned_cols=83 Identities=12% Similarity=0.295 Sum_probs=69.2
Q ss_pred ceEEEEEeeCCeEEEEEEEEe--cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHC
Q 025518 127 QRVVPVTPSNGQLVGFGRAVS--DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEAC 204 (251)
Q Consensus 127 ~~~v~va~~~g~iVG~~~~~~--d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~ 204 (251)
...++..+...++||..++.. ......++..|+|+.++||+|.|+.||+.++++++..|.+.++|.+. +-.+||+++
T Consensus 56 ~sL~Ll~E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~-DQ~~FYe~l 134 (225)
T KOG3397|consen 56 MSLLLLNEENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTD-DQCRFYESL 134 (225)
T ss_pred eeeeeecccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecc-cchhhhhhh
Confidence 334555566789999998843 44557889999999999999999999999999999999999998863 456899999
Q ss_pred CCeEee
Q 025518 205 GFGNDI 210 (251)
Q Consensus 205 GF~~~~ 210 (251)
||+...
T Consensus 135 GYe~c~ 140 (225)
T KOG3397|consen 135 GYEKCD 140 (225)
T ss_pred cccccC
Confidence 999854
No 53
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.87 E-value=1.1e-08 Score=82.50 Aligned_cols=76 Identities=20% Similarity=0.298 Sum_probs=64.2
Q ss_pred eCCeEEEEEEEEecCCc--eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC-CcEEEEEecHhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGL--TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE-IYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~--~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g-i~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
.+|++++|+++...+.. .+.|.+|.|+|++||+|+|++||..+++.+.... -..+.+........||.++||+...
T Consensus 57 ~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~GFv~~~ 135 (155)
T COG2153 57 PDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFGFVRVG 135 (155)
T ss_pred CCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHhCcEEcC
Confidence 48999999998654332 3679999999999999999999999999997654 3458888888999999999999865
No 54
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.81 E-value=3.4e-08 Score=95.71 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=62.9
Q ss_pred CCeEEEEEEEEecCC--------ceEEEEEEee-----------CCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHh
Q 025518 136 NGQLVGFGRAVSDVG--------LTASIHDIMV-----------IPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~--------~~~~I~~l~V-----------~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~ 196 (251)
++.++||+++..... ..++|..|.| +++|||+|+|++||+++++.+++.|+..|.+.++..
T Consensus 422 ~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~~ 501 (522)
T TIGR01211 422 NDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGIG 501 (522)
T ss_pred CCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCch
Confidence 578999999853321 2455666553 599999999999999999999999999999988999
Q ss_pred HHHHHHHCCCeEee
Q 025518 197 ERLFFEACGFGNDI 210 (251)
Q Consensus 197 a~~fYek~GF~~~~ 210 (251)
+..||+|+||+..+
T Consensus 502 A~~FY~klGf~~~g 515 (522)
T TIGR01211 502 VREYYRKLGYELDG 515 (522)
T ss_pred HHHHHHHCCCEEEc
Confidence 99999999999865
No 55
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.77 E-value=1.1e-07 Score=81.17 Aligned_cols=59 Identities=24% Similarity=0.321 Sum_probs=44.5
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHH-------------------------HhCCCcEEEEEe--cHhHHHHHHHC
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRML-------------------------TSREIYDIAALC--SEEERLFFEAC 204 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~-------------------------~~~gi~~I~l~~--~~~a~~fYek~ 204 (251)
...|.+|+|+|++|++|+|+++++.+++++ +..++..|-... +.+..+||.|+
T Consensus 90 g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~ 169 (196)
T PF13718_consen 90 GARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKN 169 (196)
T ss_dssp EEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCT
T ss_pred ceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHC
Confidence 456889999999999999999999999999 466777777765 78999999999
Q ss_pred CCeEee
Q 025518 205 GFGNDI 210 (251)
Q Consensus 205 GF~~~~ 210 (251)
||....
T Consensus 170 gf~pv~ 175 (196)
T PF13718_consen 170 GFVPVY 175 (196)
T ss_dssp T-EEEE
T ss_pred CcEEEE
Confidence 999764
No 56
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.72 E-value=9.5e-08 Score=63.40 Aligned_cols=57 Identities=30% Similarity=0.465 Sum_probs=50.2
Q ss_pred eCCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 025518 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l 191 (251)
.+++++|++.+.... ....++..++|+|+|||+|+|++|+..+++++.+.++..+.+
T Consensus 6 ~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 6 DDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred cCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 468999999987754 467889999999999999999999999999999888887765
No 57
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=98.70 E-value=1.4e-07 Score=79.72 Aligned_cols=59 Identities=20% Similarity=0.287 Sum_probs=51.9
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC-CcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE-IYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g-i~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
..+|..+.|.+.||.+|||+.|+..+.+++.... +..+.+.+ |..++.||+++||+.+.
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~ 151 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVE 151 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEee
Confidence 3789999999999999999999999999998777 55566655 78899999999999875
No 58
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.54 E-value=3.7e-07 Score=80.46 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=68.2
Q ss_pred cceEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCc-EEEEEe-cHhHHHHHHH
Q 025518 126 AQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY-DIAALC-SEEERLFFEA 203 (251)
Q Consensus 126 ~~~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~-~I~l~~-~~~a~~fYek 203 (251)
....+... ++|++|..+..-..+..+..|..++++|+|||+|+++.|+..+-+..-+.|.. .+...+ |+-+.+.|+|
T Consensus 176 ~~~~~f~~-~d~~iVa~A~t~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~r 254 (268)
T COG3393 176 RSRTYFLE-GDGKIVAKAETAAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQR 254 (268)
T ss_pred ceeEEEEc-cCCcEEEeeeccccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHH
Confidence 34444443 35699999988888888999999999999999999999999999988777754 344444 7889999999
Q ss_pred CCCeEee
Q 025518 204 CGFGNDI 210 (251)
Q Consensus 204 ~GF~~~~ 210 (251)
.||+..+
T Consensus 255 iGF~~~g 261 (268)
T COG3393 255 IGFREIG 261 (268)
T ss_pred hCCeecc
Confidence 9999865
No 59
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.52 E-value=1.1e-06 Score=87.68 Aligned_cols=57 Identities=25% Similarity=0.294 Sum_probs=49.1
Q ss_pred EEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe--cHhHHHHHHHCCCeEee
Q 025518 153 ASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC--SEEERLFFEACGFGNDI 210 (251)
Q Consensus 153 ~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~--~~~a~~fYek~GF~~~~ 210 (251)
..|.+|+|+|++|++|||++|++.+.++++ .++..+-+.. +++..+|+.||||.+.-
T Consensus 532 ~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVh 590 (758)
T COG1444 532 WRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVH 590 (758)
T ss_pred eeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEE
Confidence 358889999999999999999999999996 4566665554 89999999999999854
No 60
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=98.52 E-value=8.7e-07 Score=72.41 Aligned_cols=76 Identities=12% Similarity=0.294 Sum_probs=63.9
Q ss_pred eCCeEEEEEEEEe---cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeE
Q 025518 135 SNGQLVGFGRAVS---DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGN 208 (251)
Q Consensus 135 ~~g~iVG~~~~~~---d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~ 208 (251)
.+++|.|++.... +..+++.+..|.|.|+||+.|+|+.||..+++.....+...+.+.+ |.-|+.||+++||..
T Consensus 49 p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~ 128 (173)
T KOG3234|consen 49 PTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSV 128 (173)
T ss_pred CCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceE
Confidence 3688999997643 3456888999999999999999999999999999777666777766 677889999999998
Q ss_pred ee
Q 025518 209 DI 210 (251)
Q Consensus 209 ~~ 210 (251)
-.
T Consensus 129 YR 130 (173)
T KOG3234|consen 129 YR 130 (173)
T ss_pred EE
Confidence 65
No 61
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.47 E-value=2.3e-06 Score=69.70 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=62.1
Q ss_pred CCeEEEEEEEEecC----CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCCCe
Q 025518 136 NGQLVGFGRAVSDV----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACGFG 207 (251)
Q Consensus 136 ~g~iVG~~~~~~d~----~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~GF~ 207 (251)
++++||.+.+.... .....| ...++|+|+|+|+|+..+..+++++.+ .++.+|.+.| |....++++|+||+
T Consensus 76 ~~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~ 154 (187)
T COG1670 76 DGELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFR 154 (187)
T ss_pred CCeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCCh
Confidence 35899999886433 223444 466699999999999999999999854 7999999998 77888899999999
Q ss_pred EeecCce
Q 025518 208 NDILGST 214 (251)
Q Consensus 208 ~~~~~~~ 214 (251)
..+....
T Consensus 155 ~eg~~~~ 161 (187)
T COG1670 155 LEGELRQ 161 (187)
T ss_pred hhhhhhh
Confidence 9764333
No 62
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=98.38 E-value=2.1e-06 Score=70.39 Aligned_cols=78 Identities=18% Similarity=0.269 Sum_probs=62.4
Q ss_pred EeeCCeEEEEEEEEec-----CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHH-
Q 025518 133 TPSNGQLVGFGRAVSD-----VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFE- 202 (251)
Q Consensus 133 a~~~g~iVG~~~~~~d-----~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYe- 202 (251)
.+++|+||||+.+.-+ ..-...|.-|+|+..||+.|||++||........+ -+...|.|-+ |..+..+|.
T Consensus 47 ~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~ 126 (193)
T KOG3235|consen 47 EDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKN 126 (193)
T ss_pred EcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhh
Confidence 3468999999987532 23378899999999999999999999997776543 3566777776 677888999
Q ss_pred HCCCeEee
Q 025518 203 ACGFGNDI 210 (251)
Q Consensus 203 k~GF~~~~ 210 (251)
.+||+...
T Consensus 127 tl~F~v~e 134 (193)
T KOG3235|consen 127 TLGFVVCE 134 (193)
T ss_pred ccceEEee
Confidence 89999865
No 63
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=98.32 E-value=5.3e-06 Score=74.13 Aligned_cols=106 Identities=16% Similarity=0.286 Sum_probs=79.8
Q ss_pred eEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCe
Q 025518 128 RVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFG 207 (251)
Q Consensus 128 ~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~ 207 (251)
+.+.+..+++++|+++. .....|-.|+|++.+||.|+.-+|+.++++.+-++|...+.+.+.+...+||..|||.
T Consensus 37 ~~v~~~~~~~~iiacGs-----iaGnvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~ 111 (352)
T COG3053 37 YFVAIYRDNEEIIACGS-----IAGNVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFS 111 (352)
T ss_pred EEEEEEcCCCcEEEecc-----cccceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCce
Confidence 34444455799999983 3344577899999999999999999999999999999999999999999999999999
Q ss_pred EeecCceeeEEeccCC----CCCCChHHHHhhcce
Q 025518 208 NDILGSTTMMYAKTAS----TGFGGSQMVKRAGRK 238 (251)
Q Consensus 208 ~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~ 238 (251)
+.......+.+..+-. +|+++-..-+.-|.|
T Consensus 112 ~i~~~~~~ivlmENs~trl~~y~~~L~k~r~~gkk 146 (352)
T COG3053 112 EIASAENVIVLMENSATRLKDYLSSLKKLRHPGKK 146 (352)
T ss_pred EeeccCceEEEeecCchhHHHHHHHHHHhccCCCe
Confidence 9654444444444333 444444444444554
No 64
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.23 E-value=9.9e-06 Score=59.14 Aligned_cols=65 Identities=22% Similarity=0.297 Sum_probs=49.8
Q ss_pred CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHH
Q 025518 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEA 203 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek 203 (251)
+|+.+|++.... .+....|....|.|++||||||+.|++.+++++++.|. +|...|. =+..+++|
T Consensus 7 ~g~~~a~l~Y~~-~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~-kv~p~C~-y~~~~~~~ 71 (78)
T PF14542_consen 7 DGEEIAELTYRE-DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGL-KVVPTCS-YVAKYFRR 71 (78)
T ss_dssp STTEEEEEEEEE-SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT--EEEETSH-HHHHHHHH
T ss_pred CCEEEEEEEEEe-CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC-EEEEECH-HHHHHHHh
Confidence 688999997755 45577888999999999999999999999999999986 4555553 23345554
No 65
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.16 E-value=5.8e-05 Score=59.95 Aligned_cols=72 Identities=26% Similarity=0.434 Sum_probs=52.3
Q ss_pred CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec------H-hHHHHHHHCCCeE
Q 025518 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS------E-EERLFFEACGFGN 208 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~------~-~a~~fYek~GF~~ 208 (251)
|++++|.+.+..+ +....|.++.|.+-=|++|+|+.|++.+.+.+ .++..+.+... . ....|-+.|||..
T Consensus 46 NdRlLgAv~v~~~-~~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~ 122 (128)
T PF12568_consen 46 NDRLLGAVKVTIS-GQQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSA 122 (128)
T ss_dssp TTEEEEEEEEEEE-TTEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE
T ss_pred chheeeeEEEEEc-CcceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCccc
Confidence 8999999988765 45888999999999999999999999999887 56777777652 1 2335999999976
Q ss_pred ee
Q 025518 209 DI 210 (251)
Q Consensus 209 ~~ 210 (251)
..
T Consensus 123 ~~ 124 (128)
T PF12568_consen 123 QS 124 (128)
T ss_dssp -S
T ss_pred cC
Confidence 43
No 66
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=97.99 E-value=4.9e-05 Score=63.16 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=60.5
Q ss_pred EEEEeeCCeEEEEEEEEecCCc-----eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecH---hHHHHH
Q 025518 130 VPVTPSNGQLVGFGRAVSDVGL-----TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE---EERLFF 201 (251)
Q Consensus 130 v~va~~~g~iVG~~~~~~d~~~-----~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~---~a~~fY 201 (251)
+++. +++++||++.+-+.=.. ...| .-.|.|+.||+|.|++|++.+++.+++.|+..|.+.|+. ...+--
T Consensus 72 ~~v~-~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI 149 (174)
T COG3981 72 WAVD-EDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVI 149 (174)
T ss_pred EEEe-cCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHH
Confidence 3443 48999999987542110 1223 257999999999999999999999999999999999944 455688
Q ss_pred HHCCCeEee
Q 025518 202 EACGFGNDI 210 (251)
Q Consensus 202 ek~GF~~~~ 210 (251)
+++|=..+.
T Consensus 150 ~~NGGile~ 158 (174)
T COG3981 150 EANGGILEN 158 (174)
T ss_pred HhcCCEEeE
Confidence 888866643
No 67
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.96 E-value=5.9e-05 Score=57.56 Aligned_cols=59 Identities=24% Similarity=0.339 Sum_probs=50.9
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~ 194 (251)
.+|+.+|.+.-+..+.....|..-+|.+++||||+|++|++.+++.+++.|. .|.-.|.
T Consensus 22 ~~G~~~~e~~y~~~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~-kiiP~Cs 80 (99)
T COG2388 22 DEGEVIGEATYYDRGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGL-KIIPLCS 80 (99)
T ss_pred cCCcEEEEEEEecCCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCC-eEcccch
Confidence 3788999997777777888899999999999999999999999999999887 4555565
No 68
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=97.90 E-value=1.1e-05 Score=65.90 Aligned_cols=78 Identities=24% Similarity=0.390 Sum_probs=61.4
Q ss_pred CCeEEEEEEEE---------------ecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhC-CCcEEEEEecHhHHH
Q 025518 136 NGQLVGFGRAV---------------SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-EIYDIAALCSEEERL 199 (251)
Q Consensus 136 ~g~iVG~~~~~---------------~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~-gi~~I~l~~~~~a~~ 199 (251)
.+.+||++... ..++....|+-|+|+|+||.+|.|..|+..-++....+ -.+++.|.+......
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP 149 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP 149 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc
Confidence 57888888631 11233477999999999999999999999877766444 456788999999999
Q ss_pred HHHHCCCeEeecCc
Q 025518 200 FFEACGFGNDILGS 213 (251)
Q Consensus 200 fYek~GF~~~~~~~ 213 (251)
|||++||+..++..
T Consensus 150 FYEr~gFk~vgp~~ 163 (190)
T KOG4144|consen 150 FYERFGFKAVGPCA 163 (190)
T ss_pred hhHhcCceeecccc
Confidence 99999999977543
No 69
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.85 E-value=2.7e-05 Score=55.59 Aligned_cols=44 Identities=27% Similarity=0.459 Sum_probs=40.0
Q ss_pred EeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCC
Q 025518 158 IMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGF 206 (251)
Q Consensus 158 l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF 206 (251)
++|+|++||+|||+.|+..++++++..|+. .+..+..+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhcCC
Confidence 999999999999999999999999987764 56678889999999
No 70
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=97.83 E-value=0.00024 Score=63.43 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=55.9
Q ss_pred ceEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCC
Q 025518 127 QRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGF 206 (251)
Q Consensus 127 ~~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF 206 (251)
|++++. +|++|+-|....-......| +|..+|+|||+|+++.+-..++..|.++|+.=..=..|....++=+|+||
T Consensus 167 Gf~i~~---~~~iVs~~~s~~~~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf 242 (265)
T PF12746_consen 167 GFCILH---DGEIVSGCSSYFVYENGIEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKLGF 242 (265)
T ss_dssp EEEEEE---TTEEEEEEEEEEEETTEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT-
T ss_pred EEEEEE---CCEEEEEEEEEEEECCEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCC
Confidence 444444 78998776543322334444 68999999999999999999999999998643322238888999999999
Q ss_pred eEee
Q 025518 207 GNDI 210 (251)
Q Consensus 207 ~~~~ 210 (251)
+...
T Consensus 243 ~~~~ 246 (265)
T PF12746_consen 243 HFDF 246 (265)
T ss_dssp -EEE
T ss_pred cccc
Confidence 9865
No 71
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=97.78 E-value=0.00018 Score=57.41 Aligned_cols=120 Identities=14% Similarity=0.128 Sum_probs=85.2
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
+.++.- ...|...+..|.+..+.. - ...+++.+...+...+ +...
T Consensus 8 ~~~~D~-~apd~aavLaLNNeha~e----------l----swLe~erL~~l~~eAF--~ArR------------------ 52 (167)
T COG3818 8 ILIRDV-RAPDLAAVLALNNEHALE----------L----SWLELERLYRLYKEAF--VARR------------------ 52 (167)
T ss_pred eehhhh-cCCchhhHHhccchhhhh----------c----cccCHHHHHHHHHHHH--HHhh------------------
Confidence 555553 566889998888755421 1 2246777777777663 2221
Q ss_pred ccCCcceEEEEEeeCCeEEEEEEE---------------EecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCC
Q 025518 122 LGNLAQRVVPVTPSNGQLVGFGRA---------------VSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREI 186 (251)
Q Consensus 122 ~~~~~~~~v~va~~~g~iVG~~~~---------------~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi 186 (251)
+|.+.||... ....+...||.+|.|....||+|+|+.|.+.+-++++..|.
T Consensus 53 --------------~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy 118 (167)
T COG3818 53 --------------DGNLAAFLVTFDSSARYDSPNFLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGY 118 (167)
T ss_pred --------------ccchhhheeeccccccCCCCceeehhhhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCC
Confidence 4455454432 12234578999999999999999999999999999999998
Q ss_pred cEEEEEe-----cHhHHHHHHHCCCeEee
Q 025518 187 YDIAALC-----SEEERLFFEACGFGNDI 210 (251)
Q Consensus 187 ~~I~l~~-----~~~a~~fYek~GF~~~~ 210 (251)
..|.-.+ |+....|--.+||.+.+
T Consensus 119 ~~~tCEVn~DppnpasdaFHaalGF~eVG 147 (167)
T COG3818 119 PYLTCEVNLDPPNPASDAFHAALGFHEVG 147 (167)
T ss_pred ceEEEEecCCCCChHHHHHhhhcCceEcc
Confidence 8776666 45566799999999865
No 72
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.54 E-value=0.0013 Score=57.88 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=62.5
Q ss_pred eEEEEEEeeCCCcccC--------c--------------------HHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHH
Q 025518 152 TASIHDIMVIPSLRQM--------G--------------------IGRMIVQRILRMLTSREIYDIAALCSEEERLFFEA 203 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~--------G--------------------IG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek 203 (251)
...+.+++|++++|++ | +...|+..+.+++...|+..+...++....+++.+
T Consensus 111 i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l~r 190 (241)
T TIGR03694 111 IAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLLSR 190 (241)
T ss_pred eEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHHHH
Confidence 4567789999999974 2 55779999999999999999999999999999999
Q ss_pred CCCeEeecCceeeEEeccCCCCCCChHHHHhh
Q 025518 204 CGFGNDILGSTTMMYAKTASTGFGGSQMVKRA 235 (251)
Q Consensus 204 ~GF~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 235 (251)
+|+...+.+.....-....+.+.+-+.+++.+
T Consensus 191 ~G~~~~~lG~~~~~~G~r~p~~~~~~~~~~~~ 222 (241)
T TIGR03694 191 FGIQFRQVGPPVDYHGLRAPYYLELEELLARL 222 (241)
T ss_pred hCCceEEcCCCeeECcEecceeeeHHHHHhhc
Confidence 99998776654333222233444555555443
No 73
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.36 E-value=0.0045 Score=53.37 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=68.5
Q ss_pred CCcceEEEEEeeCCeEEEEEEEEec---------------------CCceEEEEEEeeCCCcc---cCc----HHHHHHH
Q 025518 124 NLAQRVVPVTPSNGQLVGFGRAVSD---------------------VGLTASIHDIMVIPSLR---QMG----IGRMIVQ 175 (251)
Q Consensus 124 ~~~~~~v~va~~~g~iVG~~~~~~d---------------------~~~~~~I~~l~V~p~~r---g~G----IG~~Ll~ 175 (251)
+...++++..+++|+++|++++.+. ......+.+++|+++++ +.+ +...|+.
T Consensus 50 ~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~ 129 (207)
T PRK13834 50 DLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFA 129 (207)
T ss_pred CCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHH
Confidence 3444445555567899999997321 12356788999999853 222 6678999
Q ss_pred HHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeecCc
Q 025518 176 RILRMLTSREIYDIAALCSEEERLFFEACGFGNDILGS 213 (251)
Q Consensus 176 ~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~~~ 213 (251)
.+.+++...|+..+...++....+.+.++||.....+.
T Consensus 130 ~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~~lG~ 167 (207)
T PRK13834 130 GIIEWSMANGYTEIVTATDLRFERILARAGWPMQRLGE 167 (207)
T ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeEECCC
Confidence 99999999999999999998888999999999876444
No 74
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.33 E-value=0.0074 Score=46.98 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=50.6
Q ss_pred eeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 025518 134 PSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~ 193 (251)
..+|++||+......++ ..+.+...++|+++..++|..|+..+++++.+.|+..+.+..
T Consensus 77 ~~~g~~va~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 77 YDGGEPVAFALGFRHGG-TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred EECCEEEEEEEEEEECC-EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 34899999997766544 666778899999999999999999999999999998888875
No 75
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.0027 Score=55.03 Aligned_cols=125 Identities=18% Similarity=0.144 Sum_probs=83.4
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
+.+|....+.+.++..++..++ | .+++. .....+.++.+..++-.++++|.
T Consensus 3 vvvrrl~dp~el~~~~dV~~~a-W--------g~~d~---~~~~~d~i~al~~~GGlvlgAf~----------------- 53 (266)
T COG3375 3 VVVRRLTDPAELDEAEDVQASA-W--------GSEDR---DGAPADTIRALRYHGGLVLGAFS----------------- 53 (266)
T ss_pred eeEEecCCHHHHHHHHHHHHHH-h--------Ccccc---ccchHHHHHHHHhcCCeEEEEEc-----------------
Confidence 4455544555556666666555 2 22111 22344556656667778888885
Q ss_pred ccCCcceEEEEEeeCCeEEEEEEEEe---cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecH---
Q 025518 122 LGNLAQRVVPVTPSNGQLVGFGRAVS---DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE--- 195 (251)
Q Consensus 122 ~~~~~~~~v~va~~~g~iVG~~~~~~---d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~--- 195 (251)
.+|++||.+.-+. .+..+.|=|.++|.|+++|.|+|=+|=..=.+++.++|+..|.-..++
T Consensus 54 -------------~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~a 120 (266)
T COG3375 54 -------------ADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNA 120 (266)
T ss_pred -------------CCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchh
Confidence 3669999997665 334477788999999999999999998888899999999888777643
Q ss_pred hHHH-HHHHCCCeE
Q 025518 196 EERL-FFEACGFGN 208 (251)
Q Consensus 196 ~a~~-fYek~GF~~ 208 (251)
-+.+ =..|+|-..
T Consensus 121 lNA~fNi~KLGa~a 134 (266)
T COG3375 121 LNARFNISKLGAIA 134 (266)
T ss_pred hhhhcchhhhceeE
Confidence 2222 345555443
No 76
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.28 E-value=0.008 Score=50.81 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=61.7
Q ss_pred eCCeEEEEEEEEe---------------------cCCceEEEEEEeeCCCccc------CcHHHHHHHHHHHHHHhCCCc
Q 025518 135 SNGQLVGFGRAVS---------------------DVGLTASIHDIMVIPSLRQ------MGIGRMIVQRILRMLTSREIY 187 (251)
Q Consensus 135 ~~g~iVG~~~~~~---------------------d~~~~~~I~~l~V~p~~rg------~GIG~~Ll~~i~~~~~~~gi~ 187 (251)
++|+++|++++.+ .......+.+++|+++.++ .-+...|+..+.+++.+.|+.
T Consensus 52 ~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~ 131 (182)
T PF00765_consen 52 DDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIR 131 (182)
T ss_dssp ETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-S
T ss_pred ECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCC
Confidence 4699999999743 1234567889999998532 247889999999999999999
Q ss_pred EEEEEecHhHHHHHHHCCCeEeecCc
Q 025518 188 DIAALCSEEERLFFEACGFGNDILGS 213 (251)
Q Consensus 188 ~I~l~~~~~a~~fYek~GF~~~~~~~ 213 (251)
.+...++..-.+++.++||.....+.
T Consensus 132 ~~v~V~~~~~~r~l~r~G~~~~~lG~ 157 (182)
T PF00765_consen 132 HIVGVVDPAMERILRRAGWPVRRLGP 157 (182)
T ss_dssp EEEEEEEHHHHHHHHHCT-EEEESSE
T ss_pred EEEEEEChHHHHHHHHcCCceEECCC
Confidence 99999999999999999999876444
No 77
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.16 E-value=0.00069 Score=62.26 Aligned_cols=73 Identities=18% Similarity=0.123 Sum_probs=56.5
Q ss_pred CCeEEEEEEEE-----ecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeE
Q 025518 136 NGQLVGFGRAV-----SDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGN 208 (251)
Q Consensus 136 ~g~iVG~~~~~-----~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~ 208 (251)
+.++++-.... +.+ -....|..|+++|.|||+|.-++|+.+.++..++.|+.-..| .+-+.+||+|+||..
T Consensus 47 nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L--~P~s~~iYrKfGye~ 124 (389)
T COG4552 47 NQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSAL--HPFSGGIYRKFGYEY 124 (389)
T ss_pred hhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEe--ccCchhhHhhccccc
Confidence 66777666432 111 125678899999999999999999999999999999764333 567789999999997
Q ss_pred ee
Q 025518 209 DI 210 (251)
Q Consensus 209 ~~ 210 (251)
-.
T Consensus 125 as 126 (389)
T COG4552 125 AS 126 (389)
T ss_pred cc
Confidence 54
No 78
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.12 E-value=0.012 Score=49.81 Aligned_cols=103 Identities=15% Similarity=0.066 Sum_probs=68.9
Q ss_pred cccccccCHHHHHHHhhcccceeeeecccccCccccccccccccccCCcceEEEEEeeCCeEEEEEEEEe-------cCC
Q 025518 78 RTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVS-------DVG 150 (251)
Q Consensus 78 gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~v~va~~~g~iVG~~~~~~-------d~~ 150 (251)
+|.....|+...+..+.....+..+.. .+..++|+.+.+.. .+.
T Consensus 26 r~~Fk~~Di~~wk~sf~~~Y~l~~~~~-----------------------------KgT~~via~~~~~~~~~l~~~~d~ 76 (181)
T PF06852_consen 26 RWNFKRNDIKLWKESFDDDYWLVLTCL-----------------------------KGTDRVIATVHLIRFDPLNPSPDK 76 (181)
T ss_pred cccccHHHHHHHHHhhccCeEEEEEEE-----------------------------cCCCcEEEEEEEEEeccCCCCCCC
Confidence 455566788888888887443333321 12567888777632 124
Q ss_pred ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHH-CCCeEee
Q 025518 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEA-CGFGNDI 210 (251)
Q Consensus 151 ~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek-~GF~~~~ 210 (251)
...++....++|+|||+|+++.+-+.+.+..+..+-. ..+..+....+||.+ +||...+
T Consensus 77 pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N-~~~~~~~~~~~~w~k~~G~~~~~ 136 (181)
T PF06852_consen 77 PLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDN-SVAQGNVKMSNFWHKMFGFDDYG 136 (181)
T ss_pred CeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCc-eeeecCHHHHHHHHHHhCCCCCc
Confidence 5788999999999999999975555555555443333 334557788889988 8988754
No 79
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=97.04 E-value=0.0034 Score=46.96 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=56.4
Q ss_pred CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
+|++|--+.... ++.+..-+..|+|||||+.+.++...++++.+.|+. ++..+ |+..+++-.++||...+
T Consensus 7 eG~PVSW~lmdq----tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 7 EGNPVSWSLMDQ----TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFIFMP 79 (89)
T ss_pred CCCEeEEEEecc----cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCeecC
Confidence 688887774332 445667889999999999999999999999999986 34444 66778899999999865
No 80
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=96.96 E-value=0.016 Score=53.61 Aligned_cols=139 Identities=15% Similarity=0.117 Sum_probs=79.6
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
+.||.. ...|.+.|.+|-...|. |-++-+.+.+.|.+.++.+...+..-. ..
T Consensus 2 ~viRp~-~~~Dl~aL~~LA~~sg~------------G~TsLP~d~~~L~~rI~~S~~sFa~~~---------------~~ 53 (342)
T PF04958_consen 2 LVIRPA-RPSDLDALYALARESGP------------GFTSLPPDREALAERIERSERSFAGRD---------------VD 53 (342)
T ss_dssp EEEEE---GGGHHHHHHHHHHS-T------------T-TTS-S-HHHHHHHHHHHHHHHH-TT-----------------
T ss_pred eEEecC-chhhHHHHHHHHHHcCC------------CcccCCCCHHHHHHHHHHHHHHhhccc---------------cC
Confidence 467775 78899999999987753 334466799999999998865442210 00
Q ss_pred ccCCcceEEEEEe-eCCeEEEEEEEE------------------------------------ecCCceEEEEEEeeCCCc
Q 025518 122 LGNLAQRVVPVTP-SNGQLVGFGRAV------------------------------------SDVGLTASIHDIMVIPSL 164 (251)
Q Consensus 122 ~~~~~~~~v~va~-~~g~iVG~~~~~------------------------------------~d~~~~~~I~~l~V~p~~ 164 (251)
......|+++..| +.|++||++.+. +|-.....|+.++|+|+|
T Consensus 54 ~~~~~~YlfVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~ 133 (342)
T PF04958_consen 54 FPGDEGYLFVLEDTETGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDY 133 (342)
T ss_dssp --S--EEEEEEEETTT--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGG
T ss_pred CCCccceEEEEEecCCCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHH
Confidence 1123446666654 569999999852 122224568889999999
Q ss_pred ccCcHHHHHHHHHHHHH---HhCCCcEEEEEe----cH-hHHHHHHHCCCeE
Q 025518 165 RQMGIGRMIVQRILRML---TSREIYDIAALC----SE-EERLFFEACGFGN 208 (251)
Q Consensus 165 rg~GIG~~Ll~~i~~~~---~~~gi~~I~l~~----~~-~a~~fYek~GF~~ 208 (251)
|+-|.|+.|-+.-.=.. +++=-..|.... ++ ..-.||+.+|=+.
T Consensus 134 R~~~~G~lLSr~RfLFiA~~~~rF~~~viAElrG~~De~G~SPFWdalG~~F 185 (342)
T PF04958_consen 134 RGGGNGRLLSRSRFLFIAQHRERFADRVIAELRGVSDEDGRSPFWDALGRHF 185 (342)
T ss_dssp TTSHHHHHHHHHHHHHHHH-GGGS-SEEEEE--B---TT---HHHHHTGGGT
T ss_pred cCCchHHHHHHHHHHHHHhChhhcchheeeeccCCcCCCCCCchHHHhhccc
Confidence 99999998876543333 222123444443 33 4556999988654
No 81
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=96.95 E-value=0.0033 Score=49.47 Aligned_cols=71 Identities=17% Similarity=0.357 Sum_probs=53.7
Q ss_pred CCeEEEEEEEEecC----CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-cHhHHHHHHHCCCeE
Q 025518 136 NGQLVGFGRAVSDV----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-SEEERLFFEACGFGN 208 (251)
Q Consensus 136 ~g~iVG~~~~~~d~----~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-~~~a~~fYek~GF~~ 208 (251)
+|.+|||+.+.... .....+.++++...|||+|+|++..+.+-...+ |.-++.... |.++..|+++.-+..
T Consensus 45 ~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK~~~~t~ 120 (143)
T COG5628 45 GGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWKRVAETY 120 (143)
T ss_pred CCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHHhhhccc
Confidence 88999999764322 223457789999999999999999998877654 655554444 889999999876553
No 82
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.92 E-value=0.0065 Score=56.04 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=73.7
Q ss_pred eEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccc
Q 025518 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (251)
Q Consensus 42 i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (251)
+.||.. ...|.+.|.+|-...|. |-++-+.+.+.|.+.|+.+...+..-.
T Consensus 2 ~vvRpv-~~~Dl~aL~~LA~~sG~------------G~TsLP~d~~~L~~rI~~S~~sF~~~~----------------- 51 (344)
T PRK10456 2 MVIRPV-ERSDLAALMQLAGKTGG------------GLTSLPANEATLAARIERALKTWQGEL----------------- 51 (344)
T ss_pred eEEecC-ccccHHHHHHHHHHcCC------------CcccCCCCHHHHHHHHHHHHHHhcCcC-----------------
Confidence 567775 78899999999888763 334467799999999998875442211
Q ss_pred ccCCcceEEEEEe-eCCeEEEEEEEEe------------------------------------cCCceEEEEEEeeCCCc
Q 025518 122 LGNLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSL 164 (251)
Q Consensus 122 ~~~~~~~~v~va~-~~g~iVG~~~~~~------------------------------------d~~~~~~I~~l~V~p~~ 164 (251)
-+....|++++.+ +.|++||++.+.. |-.....|+.++++|+|
T Consensus 52 ~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~ 131 (344)
T PRK10456 52 PKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDW 131 (344)
T ss_pred CCCCccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHH
Confidence 1134556666654 5699999998521 11223468889999999
Q ss_pred ccCcHHHHHHHH
Q 025518 165 RQMGIGRMIVQR 176 (251)
Q Consensus 165 rg~GIG~~Ll~~ 176 (251)
|+-|.|+.|-+.
T Consensus 132 R~~~~G~LLSr~ 143 (344)
T PRK10456 132 RKEGNGYLLSKS 143 (344)
T ss_pred cCCCchhHHHHH
Confidence 999999887554
No 83
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=96.85 E-value=0.028 Score=46.46 Aligned_cols=119 Identities=23% Similarity=0.172 Sum_probs=76.0
Q ss_pred CCCCCCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhccc----ceeeeecccccCc
Q 025518 35 FKPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSF----VVVSVFSNLALSD 110 (251)
Q Consensus 35 ~~~~~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~ 110 (251)
+.+-+..+.-.+- ...|.+++.++|.-...+ |...+ +...-...+.+-|+-++..+. +.+++..
T Consensus 17 p~~LP~gF~W~~~-dl~d~~~l~ely~lL~~n---YVEDd--d~~fRf~YS~efL~WaL~pPg~~~~whiGVR~------ 84 (162)
T PF01233_consen 17 PYPLPDGFEWSTL-DLNDDEELKELYELLNEN---YVEDD--DNMFRFDYSKEFLKWALKPPGWKKEWHIGVRV------ 84 (162)
T ss_dssp ----STTEEEEE---TTSHHHHHHHHHHHHHH---SSBTT--TSSEEE---HHHHHHHHTSTT--GGGEEEEEE------
T ss_pred CCCCCCCCEEEec-CCCCHHHHHHHHHHHHhc---CccCC--cceEEeeCCHHHHhheeeCcCCccceEEEEEE------
Confidence 3444667887773 666888988888744221 32111 122224568889998888553 4555542
Q ss_pred cccccccccccccCCcceEEEEEeeCCeEEEEEEEEec-------CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh
Q 025518 111 DESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD-------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS 183 (251)
Q Consensus 111 ~~~~~~~~~e~~~~~~~~~v~va~~~g~iVG~~~~~~d-------~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~ 183 (251)
.+++++|||+..+.- ......|.-|.||+++|.++++--|++.+..++..
T Consensus 85 -----------------------~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~ 141 (162)
T PF01233_consen 85 -----------------------KSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNL 141 (162)
T ss_dssp -----------------------TTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHT
T ss_pred -----------------------CCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhh
Confidence 237999999986431 12356788899999999999999999999999998
Q ss_pred CCCcE
Q 025518 184 REIYD 188 (251)
Q Consensus 184 ~gi~~ 188 (251)
.|+.+
T Consensus 142 ~gI~q 146 (162)
T PF01233_consen 142 QGIWQ 146 (162)
T ss_dssp TT--E
T ss_pred cCcee
Confidence 89865
No 84
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=96.67 E-value=0.0061 Score=49.77 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=47.2
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCCCeEee
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACGFGNDI 210 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~GF~~~~ 210 (251)
.+.+.-..-.|..||+|+|+..+..++.++.+ .++.+..+.+ |....+||+|++|....
T Consensus 107 ~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~ 169 (185)
T KOG4135|consen 107 TGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVF 169 (185)
T ss_pred eeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeee
Confidence 34554455569999999999999999999854 4666666666 78889999999999754
No 85
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.62 E-value=0.0098 Score=56.97 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=95.4
Q ss_pred ceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccc
Q 025518 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (251)
Q Consensus 41 ~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 120 (251)
+++++.. ...+.+.+.+|-+..+ +|.- +.++...++++++..+..+.+....
T Consensus 413 ~l~vs~~-de~~i~RIsQLtqkTN----QFnl-------TtkRy~e~dV~~~~~~~~~li~sv~---------------- 464 (574)
T COG3882 413 RLTVSKF-DEVNIPRISQLTQKTN----QFNL-------TTKRYNEEDVRQMQEDPNFLIFSVS---------------- 464 (574)
T ss_pred EEEEeec-cccCcHHHHHHhhccc----ceee-------chhhhcHHHHHHHhhCCCeEEEEEE----------------
Confidence 4678885 8889999999998764 3532 3467788899998887765544431
Q ss_pred cccCCcceEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-----cH
Q 025518 121 LLGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-----SE 195 (251)
Q Consensus 121 ~~~~~~~~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-----~~ 195 (251)
+.+.. .|.-+||++.+.-.+ ..-.|..+...=.-=|++|-++||..+++.+...|+..|...- |.
T Consensus 465 -l~DKf--------gDnGiigvviv~kk~-~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~ 534 (574)
T COG3882 465 -LKDKF--------GDNGIIGVVIVEKKE-SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNA 534 (574)
T ss_pred -ecccc--------ccCceEEEEEEEecC-CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCC
Confidence 00110 255689988665432 3444555555556678999999999999999999998887764 44
Q ss_pred hHHHHHHHCCCeEeecCc
Q 025518 196 EERLFFEACGFGNDILGS 213 (251)
Q Consensus 196 ~a~~fYek~GF~~~~~~~ 213 (251)
....||+++||+...+..
T Consensus 535 pv~~FyE~mgf~l~~eng 552 (574)
T COG3882 535 PVSDFYERMGFKLKGENG 552 (574)
T ss_pred cHHHHHHHhccccccccC
Confidence 566799999999655333
No 86
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=96.62 E-value=0.013 Score=54.01 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=70.6
Q ss_pred EecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccccc
Q 025518 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (251)
Q Consensus 44 i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 123 (251)
||.. ...|.+.|.+|-...|. |-++-+.+.+.|.+.|+.+...+..-. -+
T Consensus 2 vRPv-~~~Dl~aL~~LA~~sg~------------G~TsLP~d~~~L~~rI~~S~~sF~~~~-----------------~~ 51 (336)
T TIGR03244 2 VRPV-ETSDLDALYQLAQSTGI------------GLTSLPANEDLLSARIERAEKTFSGEL-----------------TR 51 (336)
T ss_pred cccC-ccccHHHHHHHHHHcCC------------CcccCCCCHHHHHHHHHHHHHHhcCcC-----------------CC
Confidence 3443 67799999999887763 334467799999999998865442211 11
Q ss_pred CCcceEEEEEe-eCCeEEEEEEEEe------------------------------------cCCceEEEEEEeeCCCccc
Q 025518 124 NLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLRQ 166 (251)
Q Consensus 124 ~~~~~~v~va~-~~g~iVG~~~~~~------------------------------------d~~~~~~I~~l~V~p~~rg 166 (251)
....|+++..+ +.|++||++.+.. |-.....|+.++++|+||+
T Consensus 52 ~~~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~ 131 (336)
T TIGR03244 52 AEQGYLFVLEDTETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRK 131 (336)
T ss_pred CCccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 34556666654 5699999997511 1122346888999999999
Q ss_pred CcHHHHHHHH
Q 025518 167 MGIGRMIVQR 176 (251)
Q Consensus 167 ~GIG~~Ll~~ 176 (251)
-|.|+.|-+.
T Consensus 132 ~~~G~LLSr~ 141 (336)
T TIGR03244 132 GGNGRLLSKS 141 (336)
T ss_pred CcchhhHHHH
Confidence 9999887543
No 87
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=96.39 E-value=0.023 Score=52.30 Aligned_cols=104 Identities=13% Similarity=0.126 Sum_probs=70.5
Q ss_pred EecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccccc
Q 025518 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (251)
Q Consensus 44 i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 123 (251)
||.. ...|.+.|.+|-...|. |-++-+.+.+.|.+.|+.+...+.--. ...
T Consensus 2 iRpv-~~~Dl~aL~~LA~~sG~------------G~TsLP~d~~~L~~rI~~S~~sF~~~~----------------~~~ 52 (336)
T TIGR03245 2 VRPS-RFADLPAIERLANESAI------------GVTSLPADRAKLGEKIAQSERSFAAEV----------------SFV 52 (336)
T ss_pred cccC-ccccHHHHHHHHHHcCC------------CcccCCCCHHHHHHHHHHHHHHHHhhc----------------CCC
Confidence 3443 67789999999887764 334467799999999998865442110 001
Q ss_pred CCcceEEEEEe-eCCeEEEEEEEEe------------------------------------cCCceEEEEEEeeCCCccc
Q 025518 124 NLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLRQ 166 (251)
Q Consensus 124 ~~~~~~v~va~-~~g~iVG~~~~~~------------------------------------d~~~~~~I~~l~V~p~~rg 166 (251)
....|+++..+ +.|++||++.+.. |-.....|+.++++|+||+
T Consensus 53 ~~~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~ 132 (336)
T TIGR03245 53 GEERYLFVLEDTETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRK 132 (336)
T ss_pred CCccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 34556666654 5699999998521 1122446888999999999
Q ss_pred CcHHHHHHHH
Q 025518 167 MGIGRMIVQR 176 (251)
Q Consensus 167 ~GIG~~Ll~~ 176 (251)
-|.|+.|-+.
T Consensus 133 ~~~G~lLSr~ 142 (336)
T TIGR03245 133 TEAAELLSRA 142 (336)
T ss_pred CCchhHHHHH
Confidence 9999887554
No 88
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=96.38 E-value=0.026 Score=52.00 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=70.3
Q ss_pred EecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccccccc
Q 025518 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (251)
Q Consensus 44 i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 123 (251)
||.. ...|.+.|.+|-...|. |-++-+.+.+.|.+.|+.+...+..-. ..
T Consensus 2 vRpv-~~~Dl~aL~~LA~~sg~------------G~TsLP~d~~~L~~rI~~S~~sF~~~~-----------------~~ 51 (335)
T TIGR03243 2 VRPV-RTSDLDALMQLARESGI------------GLTSLPADRAALGSRIARSEKSFAGES-----------------TR 51 (335)
T ss_pred cccC-ccccHHHHHHHHHHcCC------------CcccCCCCHHHHHHHHHHHHHHHhccc-----------------CC
Confidence 3443 67799999999887763 334467799999999998865442100 11
Q ss_pred CCcceEEEEEe-eCCeEEEEEEEEe------------------------------------cCCceEEEEEEeeCCCccc
Q 025518 124 NLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLRQ 166 (251)
Q Consensus 124 ~~~~~~v~va~-~~g~iVG~~~~~~------------------------------------d~~~~~~I~~l~V~p~~rg 166 (251)
....|+++..+ +.|++||++.+.. |-.....|+.++++|+||+
T Consensus 52 ~~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~ 131 (335)
T TIGR03243 52 GEEGYLFVLEDTETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRK 131 (335)
T ss_pred CCccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 34556655554 5699999998521 1122446888999999999
Q ss_pred CcHHHHHHHH
Q 025518 167 MGIGRMIVQR 176 (251)
Q Consensus 167 ~GIG~~Ll~~ 176 (251)
-|.|+.|-+.
T Consensus 132 ~~~G~LLSr~ 141 (335)
T TIGR03243 132 GGNGRLLSRS 141 (335)
T ss_pred CCchhhHHHH
Confidence 9999887554
No 89
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.09 E-value=0.0085 Score=57.03 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=45.7
Q ss_pred CCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 161 IPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 161 ~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
...||++|.|+.||+.++..+++.+..+|.+...-.+..+|.|+||..++
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~g 508 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDG 508 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccC
Confidence 46799999999999999999999998888888788899999999999875
No 90
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.58 E-value=0.3 Score=42.06 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=60.4
Q ss_pred eeCCeEEEEEEEEe---------------c------CCceEEEEEEeeCC--CcccCc----HHHHHHHHHHHHHHhCCC
Q 025518 134 PSNGQLVGFGRAVS---------------D------VGLTASIHDIMVIP--SLRQMG----IGRMIVQRILRMLTSREI 186 (251)
Q Consensus 134 ~~~g~iVG~~~~~~---------------d------~~~~~~I~~l~V~p--~~rg~G----IG~~Ll~~i~~~~~~~gi 186 (251)
..+|+|+||+++.. + ....-...+++|++ .-++.| ++..|+.-+++++..+|+
T Consensus 59 ~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~ 138 (209)
T COG3916 59 TSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGI 138 (209)
T ss_pred cCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCC
Confidence 57899999999742 1 11244566788886 322222 588899999999999999
Q ss_pred cEEEEEecHhHHHHHHHCCCeEee
Q 025518 187 YDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 187 ~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
.+|...++..-.+.+.+.||....
T Consensus 139 ~~IvtVt~~~meril~r~Gw~~~r 162 (209)
T COG3916 139 TGIVTVTDTGMERILRRAGWPLTR 162 (209)
T ss_pred ceEEEEEchHHHHHHHHcCCCeEE
Confidence 999999999999999999998854
No 91
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.49 E-value=0.015 Score=41.64 Aligned_cols=27 Identities=30% Similarity=0.398 Sum_probs=24.8
Q ss_pred EEEEeeCCCcccCcHHHHHHHHHHHHH
Q 025518 155 IHDIMVIPSLRQMGIGRMIVQRILRML 181 (251)
Q Consensus 155 I~~l~V~p~~rg~GIG~~Ll~~i~~~~ 181 (251)
|..|.|+|.+|++||+++||+.+.+..
T Consensus 8 I~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 8 ISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred eEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 678999999999999999999998864
No 92
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=95.22 E-value=0.16 Score=39.93 Aligned_cols=72 Identities=21% Similarity=0.312 Sum_probs=46.6
Q ss_pred CCeEEEEEEE------EecC-Cce------EEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-cHhHHHHH
Q 025518 136 NGQLVGFGRA------VSDV-GLT------ASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-SEEERLFF 201 (251)
Q Consensus 136 ~g~iVG~~~~------~~d~-~~~------~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-~~~a~~fY 201 (251)
.|.++|+.-+ +.|. +.. .-|-+++|+++.|++|+|++|+++++..-.- ...++.++- ++....|.
T Consensus 17 ~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e~~-~p~~~a~DrPS~Kll~Fl 95 (120)
T PF05301_consen 17 KGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEENV-SPHQLAIDRPSPKLLSFL 95 (120)
T ss_pred CceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHcCC-CcccceecCCcHHHHHHH
Confidence 3678998864 2221 111 1456899999999999999999999886432 122344443 45566677
Q ss_pred HH-CCCeE
Q 025518 202 EA-CGFGN 208 (251)
Q Consensus 202 ek-~GF~~ 208 (251)
+| .|-+.
T Consensus 96 ~Khy~L~~ 103 (120)
T PF05301_consen 96 KKHYGLQR 103 (120)
T ss_pred HHhcCCCc
Confidence 66 45544
No 93
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=94.42 E-value=0.22 Score=42.27 Aligned_cols=60 Identities=15% Similarity=0.292 Sum_probs=41.2
Q ss_pred cceEEEEEeeCC-eEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC
Q 025518 126 AQRVVPVTPSNG-QLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (251)
Q Consensus 126 ~~~~v~va~~~g-~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g 185 (251)
..|++...+++| .+|||-.=.........+..|.|.|-||++|.|+.|++..=+.++..+
T Consensus 53 ~FYVl~e~d~~g~h~vGyFSKEk~s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 53 LFYVLTEKDDDGFHIVGYFSKEKESWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESS-TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEecCccceeEEEEEEEecccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 444444444433 578888644333335678889999999999999999999888776655
No 94
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=94.32 E-value=0.062 Score=49.67 Aligned_cols=49 Identities=16% Similarity=0.339 Sum_probs=42.4
Q ss_pred CCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 162 PSLRQMGIGRMIVQRILRMLTS-REIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 162 p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
.+||.||.|+-||+.++..+++ .|-.+|.+...-....+|.|+||+.++
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDG 546 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecC
Confidence 3599999999999999999965 466778888777889999999999876
No 95
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.16 E-value=0.17 Score=38.56 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=37.6
Q ss_pred CCeEEEEEEEEecC--CceEEEEEEeeCCCcccCcHHHHHHHHHHHHH
Q 025518 136 NGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (251)
Q Consensus 136 ~g~iVG~~~~~~d~--~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~ 181 (251)
++...|++.+..+. ....||..++|.++.||+|+|..|++.+.+..
T Consensus 16 ~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~ 63 (99)
T cd04264 16 SEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF 63 (99)
T ss_pred eCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 45577777665543 46889999999999999999999999998763
No 96
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=94.10 E-value=0.19 Score=45.23 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=67.9
Q ss_pred EEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccccc
Q 025518 43 YISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLL 122 (251)
Q Consensus 43 ~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 122 (251)
.+|.. ...|.+.|.+|-...+. |-++-+.+.+.++..+..+...+.. +..
T Consensus 3 vvRP~-~~aDl~al~~LA~~sg~------------G~TsLP~de~~L~~Ri~~se~sf~~-----------------~~~ 52 (336)
T COG3138 3 VVRPV-ERADLEALMELAVKTGV------------GLTSLPADEATLRARIERSEKSFQG-----------------ELP 52 (336)
T ss_pred ccccc-cccCHHHHHHHHHhcCC------------CcccCCCCHHHHHHHHHHHHHHHhc-----------------ccC
Confidence 35553 67899999999877753 4455677899999888877543322 123
Q ss_pred cCCcceEEEEEe-eCCeEEEEEEEEe------------------------------------cCCceEEEEEEeeCCCcc
Q 025518 123 GNLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLR 165 (251)
Q Consensus 123 ~~~~~~~v~va~-~~g~iVG~~~~~~------------------------------------d~~~~~~I~~l~V~p~~r 165 (251)
+-..+|+++..+ +.|+++|++.+.- |-.....++.++|+|++|
T Consensus 53 ~ge~~Y~fVLEDsetG~VvG~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~R 132 (336)
T COG3138 53 PGEAGYLFVLEDSETGTVVGISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWR 132 (336)
T ss_pred CCCccEEEEEEecCCceEEeEEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHh
Confidence 345677777765 6699999987411 111123466699999999
Q ss_pred cCcHHHHH
Q 025518 166 QMGIGRMI 173 (251)
Q Consensus 166 g~GIG~~L 173 (251)
.-|-|+-|
T Consensus 133 kg~nG~Ll 140 (336)
T COG3138 133 KGGNGRLL 140 (336)
T ss_pred cccchhhh
Confidence 88777654
No 97
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=94.05 E-value=0.32 Score=40.72 Aligned_cols=125 Identities=16% Similarity=0.192 Sum_probs=75.0
Q ss_pred ceEEecCCCCC-CHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCcccccccccc
Q 025518 41 PIYISTNPSDI-NPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMV 119 (251)
Q Consensus 41 ~i~i~~~~~~~-D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (251)
+|......... |.+.|.+|.+.. |. ...+.+.+...+++....+.+
T Consensus 21 ~i~~~~s~~~~~d~~kL~~ll~~s------f~----------~~~~v~~yl~~l~~~~~~iy~----------------- 67 (170)
T PF04768_consen 21 KILKHSSLSEFVDLDKLRALLERS------FG----------GKLDVDHYLDRLNNRLFKIYV----------------- 67 (170)
T ss_dssp -EEEESSCCCSS-HHHHHHHHHHH------ST----------SSSBHTTHHHHHHTS-SEEEE-----------------
T ss_pred eeEEecCccccCCHHHHHHHHHhc------cc----------ccccHHHHHHHhhccceEEEE-----------------
Confidence 35655655666 999999999876 21 234566666666665444443
Q ss_pred ccccCCcceEEEEEeeCCeEEEEEEEE----ecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecH
Q 025518 120 PLLGNLAQRVVPVTPSNGQLVGFGRAV----SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (251)
Q Consensus 120 e~~~~~~~~~v~va~~~g~iVG~~~~~----~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~ 195 (251)
++..-|.+.+. .......|+.-++|.++.||.|++..+.+.+.+.... -......+.
T Consensus 68 ----------------d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p~---L~Wrsr~~n 128 (170)
T PF04768_consen 68 ----------------DEDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFPK---LFWRSREDN 128 (170)
T ss_dssp ----------------ETTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-SS---EEEEEETT-
T ss_pred ----------------eCCceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhccc---eEEEecCCC
Confidence 23333444442 2334589999999999999999999999999776542 123333455
Q ss_pred hHHH-HHHH-CCCeEeecCceeeEE
Q 025518 196 EERL-FFEA-CGFGNDILGSTTMMY 218 (251)
Q Consensus 196 ~a~~-fYek-~GF~~~~~~~~~~~~ 218 (251)
++.+ ||+| .|+-.. .+-.-|+|
T Consensus 129 ~~~~Wyf~rs~G~~~~-~~~~lFw~ 152 (170)
T PF04768_consen 129 PNNKWYFERSDGSFKR-NGWVLFWY 152 (170)
T ss_dssp TTHHHHHHH-SEEEEE-TTEEEEEE
T ss_pred CcccEEEEeeEEEEEC-CCeEEEEc
Confidence 6666 4455 676653 23433443
No 98
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=93.84 E-value=0.057 Score=51.40 Aligned_cols=56 Identities=29% Similarity=0.453 Sum_probs=44.8
Q ss_pred EEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec-----Hh---HHHHHHHCCCeE
Q 025518 153 ASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS-----EE---ERLFFEACGFGN 208 (251)
Q Consensus 153 ~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~-----~~---a~~fYek~GF~~ 208 (251)
+.|.++.|||+||+-|||..-+..+.++..++-++.+.-.-+ .. -..||++.||+-
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfky 305 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKY 305 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceee
Confidence 458889999999999999999999999998887776554421 11 123999999998
No 99
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=92.35 E-value=0.34 Score=48.74 Aligned_cols=32 Identities=31% Similarity=0.412 Sum_probs=28.5
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLTS 183 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~ 183 (251)
.+.|-+|+|+|+|++.|.|++-++.+.++...
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG 645 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG 645 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence 45688999999999999999999999998743
No 100
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=92.30 E-value=0.45 Score=36.28 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=33.9
Q ss_pred EEEEEEEEecC-CceEEEEEEeeCCCcccCcHHHHHHHHHHHHHH
Q 025518 139 LVGFGRAVSDV-GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (251)
Q Consensus 139 iVG~~~~~~d~-~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~ 182 (251)
.=|++.+..+. ....+|..++|.++.||+|+|..|++.+.+...
T Consensus 20 y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~ 64 (99)
T cd04265 20 YNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDFP 64 (99)
T ss_pred CcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCC
Confidence 33444443332 467899999999999999999999999987643
No 101
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=92.18 E-value=4.8 Score=32.85 Aligned_cols=74 Identities=19% Similarity=0.247 Sum_probs=49.1
Q ss_pred eCCeEEEEEEE--EecCCc-eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEe
Q 025518 135 SNGQLVGFGRA--VSDVGL-TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGND 209 (251)
Q Consensus 135 ~~g~iVG~~~~--~~d~~~-~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~ 209 (251)
+++++.||+.. +|++.. .+++..|.++|. +....-.-|+.++.+-+-+.++..+.+-.++....=-+.-||...
T Consensus 63 e~~~~~GfvLAQaVWQGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~l~~A~~a~~~~~~ 139 (161)
T PF09390_consen 63 EGGELQGFVLAQAVWQGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDPELEAAARAEGFRLG 139 (161)
T ss_dssp ETTEEEEEEEEEEEE-SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---THHHHHHHHTT----
T ss_pred cCCceeeeeehhHHhcCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCHHHHHHHhhcccccC
Confidence 58999999975 676654 566777766654 446788889999999998899999999988877777777888753
No 102
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=92.07 E-value=0.51 Score=42.59 Aligned_cols=63 Identities=11% Similarity=0.218 Sum_probs=42.7
Q ss_pred cCCcceEEEEEee-CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC
Q 025518 123 GNLAQRVVPVTPS-NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (251)
Q Consensus 123 ~~~~~~~v~va~~-~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g 185 (251)
+....|++...++ +..+|||-.=-........+..|.|.|-||++|.|+.|++..=+.++..|
T Consensus 125 ~~FlFYVl~e~d~~g~h~vGYFSKEK~s~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 125 DPFLFYVMTEVDDHGSHIVGYFSKEKVSAEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cceEEEEEEEecCCCcEEEEEeceeccccCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 3344555555433 45789988532222223457789999999999999999998877775544
No 103
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=91.28 E-value=5.8 Score=35.06 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=43.2
Q ss_pred eCCeEEEEEEEEe-cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 025518 135 SNGQLVGFGRAVS-DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (251)
Q Consensus 135 ~~g~iVG~~~~~~-d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~ 192 (251)
.+|++||.+.+-. +++..+ | ..+-||++...++|+..+-.-++.+++.|...+++-
T Consensus 151 ~~g~LiaVav~D~l~d~lSA-V-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLG 207 (240)
T PRK01305 151 GDGKLVAVAVTDVLDDGLSA-V-YTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLG 207 (240)
T ss_pred eCCeEEEEEEEeccCCceee-E-EEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeee
Confidence 4899999996522 222211 2 467899999999999999999999999998877764
No 104
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=90.96 E-value=1.7 Score=34.63 Aligned_cols=55 Identities=11% Similarity=0.049 Sum_probs=42.1
Q ss_pred eCCeEEEEEEEEe--cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 025518 135 SNGQLVGFGRAVS--DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (251)
Q Consensus 135 ~~g~iVG~~~~~~--d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~ 192 (251)
.+|++||++.+-. ++-... -.+-||++....+|+..+-.-++.++++|...+.+-
T Consensus 46 ~~~kLiav~v~D~l~~glSaV---Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLG 102 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDGLSAV---YTFYDPDYSKRSLGTYSILREIELARELGLPYYYLG 102 (128)
T ss_pred eCCeEEEEEEeecccchhhhe---eeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeC
Confidence 4899999986522 221122 346699999999999999999999999998877653
No 105
>PLN03239 histone acetyltransferase; Provisional
Probab=90.16 E-value=0.76 Score=42.60 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=41.4
Q ss_pred CCcceEEEEEee-CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC
Q 025518 124 NLAQRVVPVTPS-NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (251)
Q Consensus 124 ~~~~~~v~va~~-~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g 185 (251)
....|++...++ +-.+|||-.=-........+..|.|.|-||++|+|+.||+..=+.++..|
T Consensus 184 ~FlFYVl~e~D~~g~h~vGYFSKEK~s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 184 PFLFYVLCEVDERGFHPVGYYSKEKYSDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEEEecCCceEEEEEeeecccCCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 334455544433 34678887532222223457889999999999999999998877775544
No 106
>PTZ00064 histone acetyltransferase; Provisional
Probab=89.01 E-value=0.86 Score=44.11 Aligned_cols=61 Identities=15% Similarity=0.249 Sum_probs=42.0
Q ss_pred CcceEEEEEee-CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC
Q 025518 125 LAQRVVPVTPS-NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (251)
Q Consensus 125 ~~~~~v~va~~-~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g 185 (251)
...|++...++ +-.+|||-.=-........+..|.|.|-||++|+|+.||+..=+.++..|
T Consensus 356 FlFYVLtE~D~~G~HiVGYFSKEK~S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 356 FLFYIVTEVDEEGCHIVGYFSKEKVSLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred eEEEEEEEecCCCcEEEEEecccccCcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 34455554443 34788987532222223457889999999999999999998887776554
No 107
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=88.14 E-value=6.4 Score=36.72 Aligned_cols=115 Identities=20% Similarity=0.167 Sum_probs=74.3
Q ss_pred CCceEEecCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhccc----ceeeeecccccCccccc
Q 025518 39 MIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSF----VVVSVFSNLALSDDESS 114 (251)
Q Consensus 39 ~~~i~i~~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~ 114 (251)
+..+...+. .-.|..+|.++++-..-+ |-..+ +.-.--..+++.++.++.... +.+++.
T Consensus 78 p~gf~W~tl-dv~~~~~l~el~~lL~en---yVEd~--~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVR----------- 140 (421)
T KOG2779|consen 78 PTGFRWETL-DVSDFKDLEELYNLLNEN---YVEDD--DSMFRFDYSPEFLKWALQPPGWKKEWHIGVR----------- 140 (421)
T ss_pred CCCceeecc-CCccHhHHHHHHhhcccC---CCCcc--ccchhhhccHHHHHhhhcCCCCccceEEEEE-----------
Confidence 444566663 566778888888543211 21100 111113456778887777443 444443
Q ss_pred cccccccccCCcceEEEEEeeCCeEEEEEEEEe-------cCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCc
Q 025518 115 KRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVS-------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (251)
Q Consensus 115 ~~~~~e~~~~~~~~~v~va~~~g~iVG~~~~~~-------d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~ 187 (251)
..+++++|||+..+. .....+.|.-+.||.+.|+++++=-|++.+..++.-.||.
T Consensus 141 ------------------v~~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIf 202 (421)
T KOG2779|consen 141 ------------------VKSSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIF 202 (421)
T ss_pred ------------------EecCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhh
Confidence 234689999998643 1223567888999999999999999999999998776664
Q ss_pred E
Q 025518 188 D 188 (251)
Q Consensus 188 ~ 188 (251)
+
T Consensus 203 q 203 (421)
T KOG2779|consen 203 Q 203 (421)
T ss_pred h
Confidence 3
No 108
>PRK14852 hypothetical protein; Provisional
Probab=87.91 E-value=3.1 Score=43.74 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=51.6
Q ss_pred ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHH-CCCeEee
Q 025518 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEA-CGFGNDI 210 (251)
Q Consensus 151 ~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek-~GF~~~~ 210 (251)
..+.+..++++++.|.+-+=-.+++.+..++...++..+.+.||+.-..||++ +||+..+
T Consensus 120 ~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig 180 (989)
T PRK14852 120 NVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFG 180 (989)
T ss_pred eEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCcccc
Confidence 45678889999999887777788888888887789999999999999999997 9999865
No 109
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=87.27 E-value=0.8 Score=43.87 Aligned_cols=62 Identities=11% Similarity=0.181 Sum_probs=41.3
Q ss_pred CCcceEEEEEee-CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCC
Q 025518 124 NLAQRVVPVTPS-NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (251)
Q Consensus 124 ~~~~~~v~va~~-~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~g 185 (251)
....|++...++ +-.+|||-.=-........+..|.|.|-||++|+|+.||+..=+.++..|
T Consensus 277 ~FlFYvl~e~d~~g~h~vGyFSKEk~s~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 277 LFLFYVLCECDDRGCHMVGYFSKEKHSEEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccCcCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 334455555443 34789988532222223457889999999999999999987766665443
No 110
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=86.22 E-value=3.8 Score=37.28 Aligned_cols=75 Identities=11% Similarity=-0.019 Sum_probs=56.8
Q ss_pred eCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec---HhHHHHHHHCCCeEee
Q 025518 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS---EEERLFFEACGFGNDI 210 (251)
Q Consensus 135 ~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~---~~a~~fYek~GF~~~~ 210 (251)
.+|++||.+.+...+.. .+....+-+++++..+-+..|+-.+++++.+.|+....+-.. ....+|=+++||+..+
T Consensus 203 ~~g~~va~~l~~~~~~~-~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~ 280 (330)
T TIGR03019 203 GDGVVASAVLSFYFRDE-VLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQP 280 (330)
T ss_pred CCCCEEEEEEEEEeCCE-EEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCCCeecc
Confidence 57888888765554332 222234677999999999999999999999999998888652 3556677889999876
No 111
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.86 E-value=1.4 Score=38.52 Aligned_cols=86 Identities=20% Similarity=0.164 Sum_probs=52.1
Q ss_pred CeEEEEEEE------EecCC------ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-cHhHHHHHHH
Q 025518 137 GQLVGFGRA------VSDVG------LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-SEEERLFFEA 203 (251)
Q Consensus 137 g~iVG~~~~------~~d~~------~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-~~~a~~fYek 203 (251)
+.|.|++.+ +.|+. ...-|-+++|+++-|++|.|++|++++++.=.- ...++.++- +.....|-+|
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~kE~v-ephQ~a~DrPS~kLl~Fm~k 159 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKKENV-EPHQCAFDRPSAKLLQFMEK 159 (264)
T ss_pred hheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHHhcCC-CchheeccChHHHHHHHHHH
Confidence 578888864 22322 133477999999999999999999999875321 122343442 2334456665
Q ss_pred -CCCeEeecCceeeEEeccCC
Q 025518 204 -CGFGNDILGSTTMMYAKTAS 223 (251)
Q Consensus 204 -~GF~~~~~~~~~~~~~~~~~ 223 (251)
.|-+..-.-...+.+..+.-
T Consensus 160 hYgl~~tVwQ~nnfvlfegfF 180 (264)
T KOG4601|consen 160 HYGLKDTVWQSNNFVLFEGFF 180 (264)
T ss_pred hcCccccccccCcEEEEehhh
Confidence 66666433344455444433
No 112
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=84.69 E-value=2.7 Score=31.55 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=19.3
Q ss_pred eEEEEEEeeCCCcccCcHHHHHH
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIV 174 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll 174 (251)
.+.|.+++|+|+||+...-..|.
T Consensus 78 ~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 78 VAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred EEEeehheECHhHCCChHHHHHh
Confidence 56788899999999998877764
No 113
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=84.57 E-value=2.2 Score=39.84 Aligned_cols=42 Identities=14% Similarity=0.419 Sum_probs=31.7
Q ss_pred ceEEEEEEeeCCCcccCcHHHHHHHHHHHHH-HhCCCcEEEEEec
Q 025518 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAALCS 194 (251)
Q Consensus 151 ~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~-~~~gi~~I~l~~~ 194 (251)
....|..+.+.|.|||+|+|+.|++.+.... ....+ +.+.++
T Consensus 216 ~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v--~DiTVE 258 (403)
T KOG2696|consen 216 IRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPTV--LDITVE 258 (403)
T ss_pred hhhhhheeEEeccccCCchHHHHHHHHHHhhccCCce--eEEEec
Confidence 3455777999999999999999999999655 44444 444444
No 114
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=84.21 E-value=1.3 Score=41.67 Aligned_cols=61 Identities=15% Similarity=0.267 Sum_probs=40.7
Q ss_pred cCCcceEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhC
Q 025518 123 GNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR 184 (251)
Q Consensus 123 ~~~~~~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~ 184 (251)
+....|++...++.| .|||-.=--.......+..|.|.|-||++|.|+.|++.-=+..+..
T Consensus 232 dpFlFYVlte~d~~G-~VGYFSKEK~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 232 DPFLFYVLTECDSYG-CVGYFSKEKESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred cceEEEEEEecCCcc-eeeeeccccccccccceeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 344556666666666 4777632222222345778999999999999999998776666443
No 115
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=81.84 E-value=2.3 Score=35.70 Aligned_cols=54 Identities=19% Similarity=0.114 Sum_probs=46.1
Q ss_pred ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCC
Q 025518 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACG 205 (251)
Q Consensus 151 ~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~G 205 (251)
..+.+.-.+|.|+.+|.||+..| ..+...+++.|++.-.-.|.....+.++|++
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~ 137 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHALRNHVERLC 137 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHHHHHHHHHh
Confidence 46778889999999999999976 6888888999999887788888888888876
No 116
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=81.28 E-value=7.6 Score=34.77 Aligned_cols=65 Identities=14% Similarity=0.031 Sum_probs=39.9
Q ss_pred EEEEEee-CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 025518 129 VVPVTPS-NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (251)
Q Consensus 129 ~v~va~~-~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~ 193 (251)
.+.++.. +|+++||+.+...++...++.++.-...---+|+-..|+..+++.+++.|+..|.|..
T Consensus 181 ~~~~~~~~dgki~af~~~~~~~~~~~~~~~~~k~~~~a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ 246 (299)
T PF09924_consen 181 RGFVARVADGKIVAFAIGSPLGGRDGWSIDFEKADPDAPKGIYEFLNVEFAEHLKAEGVEYLNLGF 246 (299)
T ss_dssp EEEEEEE-TTEEEEEEEEEEEE-TTEEEEEEEEE-TT-STTHHHHHHHHHHHHS--TT--EEE---
T ss_pred eEEEEEECCCcEEEEEEEEEccCCccEEEEEEecCCCCCCcHHHHHHHHHHHhhhhCCceEEEccc
Confidence 3444445 9999999988654423334444444433356999999999999999988999888654
No 117
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=80.27 E-value=8.2 Score=36.40 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=58.3
Q ss_pred cCCCCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccccccCC
Q 025518 46 TNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNL 125 (251)
Q Consensus 46 ~~~~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 125 (251)
+.+.+.|.+.+..|..+. |. -..++..+...+.++-..+.+
T Consensus 340 ttw~~Ldl~r~q~LI~~S------Fk----------RTLd~h~y~~r~~~~La~~iV----------------------- 380 (495)
T COG5630 340 TTWKDLDLPRLQHLIQSS------FK----------RTLDPHYYETRINTPLARAIV----------------------- 380 (495)
T ss_pred CChhhcCcHHHHHHHHHH------Hh----------hccCHHHHHHhccCcceeEEe-----------------------
Confidence 345667777777777655 21 124555666666655443333
Q ss_pred cceEEEEEeeCCeEEEEEEEEec---CCceEEEEEEeeCCCccc-CcHHHHHHHHHHHHHH
Q 025518 126 AQRVVPVTPSNGQLVGFGRAVSD---VGLTASIHDIMVIPSLRQ-MGIGRMIVQRILRMLT 182 (251)
Q Consensus 126 ~~~~v~va~~~g~iVG~~~~~~d---~~~~~~I~~l~V~p~~rg-~GIG~~Ll~~i~~~~~ 182 (251)
.|.-.|.+.+..+ .....|+..++|.+..|| .|||..+..-+.+..-
T Consensus 381 ----------sgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 381 ----------SGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred ----------eccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 2344455544332 345789999999999999 9999999998888663
No 118
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=77.54 E-value=6.7 Score=34.60 Aligned_cols=44 Identities=11% Similarity=0.148 Sum_probs=39.8
Q ss_pred CcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 167 MGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 167 ~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
.|-...|+..+.+.+++.|+.+|.+-+...+..+|+++||...+
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~ 63 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEA 63 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEE
Confidence 34478999999999999999999999999999999999999974
No 119
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=73.72 E-value=81 Score=29.68 Aligned_cols=54 Identities=15% Similarity=0.290 Sum_probs=45.9
Q ss_pred EEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe-cHhHHHHHHHCCCeEee
Q 025518 157 DIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC-SEEERLFFEACGFGNDI 210 (251)
Q Consensus 157 ~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~-~~~a~~fYek~GF~~~~ 210 (251)
+|.+++......+.+.|++.+.+.+++.|+..+.+.. +++.....+..||..-.
T Consensus 105 R~l~~~~~~~~~~~~~L~~~~~~~a~~~~~Ss~h~lF~~~~~~~~l~~~G~~~r~ 159 (370)
T PF04339_consen 105 RLLIAPGADRAALRAALLQALEQLAEENGLSSWHILFPDEEDAAALEEAGFLSRQ 159 (370)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHHHHcCCCcceeecCCHHHHHHHHhCCCceec
Confidence 3888888888999999999999999999998887765 66667788999998743
No 120
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=73.40 E-value=20 Score=35.66 Aligned_cols=52 Identities=12% Similarity=0.044 Sum_probs=40.6
Q ss_pred eeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec---HhHHHHHHHCCCeEee
Q 025518 159 MVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS---EEERLFFEACGFGNDI 210 (251)
Q Consensus 159 ~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~---~~a~~fYek~GF~~~~ 210 (251)
..+.+.-..|+.++||+.++..++..|...-.+.+. .....||.++||....
T Consensus 823 ~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~ 877 (891)
T KOG3698|consen 823 YFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLG 877 (891)
T ss_pred ccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHh
Confidence 344555578999999999999999888887777773 3456699999998743
No 121
>PRK04531 acetylglutamate kinase; Provisional
Probab=70.19 E-value=13 Score=35.26 Aligned_cols=93 Identities=9% Similarity=0.043 Sum_probs=54.6
Q ss_pred CCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe--cHhHHH-HHHH-CCCeEeec
Q 025518 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC--SEEERL-FFEA-CGFGNDIL 211 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~--~~~a~~-fYek-~GF~~~~~ 211 (251)
++..=|.+.+.++ ....|+..++|.++.||.|++..+...+.+... .+...+ +.++.+ ||+| -|+-.. .
T Consensus 295 ~~~y~~~Aiv~~~-~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~~-----~L~Wrsr~~n~~~~Wyf~~s~G~~~~-~ 367 (398)
T PRK04531 295 SENYRAAAILTET-GGGPYLDKFAVLDDARGEGLGRAVWNVMREETP-----QLFWRSRHNNTINKFYYAESDGCIKQ-E 367 (398)
T ss_pred eCCCcEEEEEecC-CCceEeEEEEEccchhhcChHHHHHHHHHhhCC-----ceEEEcCCCCCccceeeecccceEec-C
Confidence 3334444444333 457899999999999999999999999988653 333343 444445 4555 565552 2
Q ss_pred CceeeEEeccCCCCCCChHHHHhhcc
Q 025518 212 GSTTMMYAKTASTGFGGSQMVKRAGR 237 (251)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~v~~~~~ 237 (251)
+- .++|. +.++..+...+|..+..
T Consensus 368 ~~-~lFw~-G~~~~~~~~~~~~~~~~ 391 (398)
T PRK04531 368 KW-KVFWY-GLDDFEQIPKCVAHCAN 391 (398)
T ss_pred Cc-EEEEc-cCCcHHHHHHHHHHHhc
Confidence 33 33332 22233344445554433
No 122
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=67.56 E-value=29 Score=34.32 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=68.6
Q ss_pred cceEEEEEeeCCeEEEEEEEEecCC-ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec------Hh--
Q 025518 126 AQRVVPVTPSNGQLVGFGRAVSDVG-LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS------EE-- 196 (251)
Q Consensus 126 ~~~~v~va~~~g~iVG~~~~~~d~~-~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~------~~-- 196 (251)
....+.+.+.+|+++||+.+...+. ....+.-.--+|+. -+|+-..|+..++.++++.|+..+.+..- +.
T Consensus 391 ~~~~va~~~~~g~VvaFa~l~~~~~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fsLgmApls~~~~~~l 469 (538)
T COG2898 391 DIFPVAAVDNEGEVVAFANLMPTGGKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFSLGMAPLSGLFERQL 469 (538)
T ss_pred ccceeeEEcCCCCeEEEEeecccCCcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEecCCcccCCcccccc
Confidence 3344555667788999999987544 45555444455554 57999999999999999999999888641 11
Q ss_pred -------HHHHHHHC----CCeEeecCceeeEEeccCCCCCCChHHHHhhcce
Q 025518 197 -------ERLFFEAC----GFGNDILGSTTMMYAKTASTGFGGSQMVKRAGRK 238 (251)
Q Consensus 197 -------a~~fYek~----GF~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 238 (251)
...+|+.. +|+ .-..+|.|++..-++..+.-+-|..
T Consensus 470 a~~~~R~~r~l~~~~~~~Y~f~------gLrrfK~Kf~P~W~prYl~~~~~~~ 516 (538)
T COG2898 470 APLWNRFGRLLFRHGERFYNFE------GLRRFKDKFHPEWEPRYLAYRKGLS 516 (538)
T ss_pred chHHHHHHHHHHHhcccccchH------HHHHHhhccCCccceeEEEEcCCCc
Confidence 11244421 122 1233777777777776665555554
No 123
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=66.78 E-value=24 Score=27.31 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=27.8
Q ss_pred CceEEEEEEeeCCCccc-CcHHHHHHHHHHHH
Q 025518 150 GLTASIHDIMVIPSLRQ-MGIGRMIVQRILRM 180 (251)
Q Consensus 150 ~~~~~I~~l~V~p~~rg-~GIG~~Ll~~i~~~ 180 (251)
....++..++|.++.|| .|++..+.+.+.+.
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~ 68 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLDG 68 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHHc
Confidence 45789999999999997 89999999999873
No 124
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=64.29 E-value=40 Score=36.30 Aligned_cols=58 Identities=21% Similarity=0.129 Sum_probs=45.8
Q ss_pred eeCCeEEEEEEEEecCCceEEEEEEeeC-CCcccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 025518 134 PSNGQLVGFGRAVSDVGLTASIHDIMVI-PSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (251)
Q Consensus 134 ~~~g~iVG~~~~~~d~~~~~~I~~l~V~-p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~ 193 (251)
+.+|+++||+.+...+... +-.|++-. |+ --.|+-..|+..++.++++.|+..+.|..
T Consensus 427 d~~G~i~af~s~~p~~~~g-~slDLMRr~pd-apnGvmE~L~~~l~~~~k~~G~~~~sLg~ 485 (1094)
T PRK02983 427 DADGQVVALLSFVPWGRRG-LSLDLMRRSPD-APNGVIELMVAELALEAESLGITRISLNF 485 (1094)
T ss_pred CCCCeEEEEEEEeeeCCCC-EEEEecccCCC-CCCCHHHHHHHHHHHHHHHcCCCEEEech
Confidence 5679999999987754333 33355554 44 47999999999999999999999998875
No 125
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=58.13 E-value=5 Score=37.28 Aligned_cols=54 Identities=17% Similarity=0.328 Sum_probs=35.2
Q ss_pred CCcceEEEEEeeCC-eEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHH
Q 025518 124 NLAQRVVPVTPSNG-QLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRI 177 (251)
Q Consensus 124 ~~~~~~v~va~~~g-~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i 177 (251)
-...|++...++.+ .+|||-.=--.......+..|-+.|-||++|.|+.|++.-
T Consensus 233 pflFYvl~~~~~~~~h~vGyFSKEK~S~~~yNLaCILtLP~yQRrGYG~lLIdFS 287 (395)
T COG5027 233 PFLFYVLTERGDTGCHLVGYFSKEKESEQDYNLACILTLPPYQRRGYGKLLIDFS 287 (395)
T ss_pred ceEEEEEEEcCCcceeeeeeechhhcccccCceEEEEecChhHhcccceEeeeee
Confidence 33445555544333 5788875322223335577899999999999999987654
No 126
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=57.22 E-value=1.1e+02 Score=28.71 Aligned_cols=83 Identities=20% Similarity=0.149 Sum_probs=49.3
Q ss_pred EEEEeeCCeEEEEEEEEecCCc-----------eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHH
Q 025518 130 VPVTPSNGQLVGFGRAVSDVGL-----------TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (251)
Q Consensus 130 v~va~~~g~iVG~~~~~~d~~~-----------~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~ 198 (251)
++++..+|+|-+|+.++.-+.. .+|+. -.|..+ -=-..||..++-.++..|..-.....--++.
T Consensus 310 yVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl~aaYly-Y~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~ 384 (421)
T KOG2779|consen 310 YVVESPNGKITDFCSFYSLPSTVMGNPKYKTLQAAYLY-YNVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENE 384 (421)
T ss_pred EEEECCCCcccceeeEEeccccccCCCCcceeeeeeEE-EeccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhh
Confidence 3444458889999987543221 12221 223322 1134567777777777776554444445788
Q ss_pred HHHHHCCCeEeecCceeeEE
Q 025518 199 LFFEACGFGNDILGSTTMMY 218 (251)
Q Consensus 199 ~fYek~GF~~~~~~~~~~~~ 218 (251)
.|+.+++|-... |...+.+
T Consensus 385 ~fl~~LkFg~Gd-G~l~YYL 403 (421)
T KOG2779|consen 385 SFLKDLKFGPGD-GNLQYYL 403 (421)
T ss_pred hHHHhcCcCcCC-CceeEEE
Confidence 999999999865 5555543
No 127
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=56.99 E-value=82 Score=28.83 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCeEEEEEEEEec------CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhC-------C-CcEEEEEe-----cHh
Q 025518 136 NGQLVGFGRAVSD------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-------E-IYDIAALC-----SEE 196 (251)
Q Consensus 136 ~g~iVG~~~~~~d------~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~-------g-i~~I~l~~-----~~~ 196 (251)
.+.+|+.+.++.+ ......|..|.|..=|..-|+=.-|+++++-++++. . -..|.+.+ +..
T Consensus 177 RetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~YSFD~~ 256 (304)
T PF11124_consen 177 RETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVYSFDKD 256 (304)
T ss_pred cCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEeeeccHH
Confidence 4679999988653 234667888999999999999999999997766541 1 12455544 678
Q ss_pred HHHHHHHCCCeEee
Q 025518 197 ERLFFEACGFGNDI 210 (251)
Q Consensus 197 a~~fYek~GF~~~~ 210 (251)
..+..++.||+...
T Consensus 257 ~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 257 MKKTLKKKGFKKIS 270 (304)
T ss_pred HHHHHHHCCCeeee
Confidence 88999999999865
No 128
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=54.03 E-value=71 Score=24.23 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=34.5
Q ss_pred CeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHH
Q 025518 137 GQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (251)
Q Consensus 137 g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~ 181 (251)
+..=|.+.+..+.....++..++|.++.++.|++..+.+.+.+..
T Consensus 18 e~y~~~AIvt~~~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~ 62 (98)
T cd03173 18 EPLEGVAIVTYEGNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDF 62 (98)
T ss_pred CCccEEEEEecCCCCCEEEEEEEEcccccccCHHHHHHHHHHhhC
Confidence 334455544444446789999999999999999999999998763
No 129
>PRK00756 acyltransferase NodA; Provisional
Probab=50.98 E-value=37 Score=28.54 Aligned_cols=57 Identities=21% Similarity=0.213 Sum_probs=41.0
Q ss_pred ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHH---HCCCeE
Q 025518 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFE---ACGFGN 208 (251)
Q Consensus 151 ~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYe---k~GF~~ 208 (251)
..+.+...+|.|+..|.||+..| ..+.-.+++.++..-.-.+......-.+ +.|...
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~r~g~~t 143 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHALRNHVERLCRNGLAT 143 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHHHHHHHHHHhccCcce
Confidence 46678888999999999999877 6777788889988655555444333333 556554
No 130
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=46.50 E-value=58 Score=27.44 Aligned_cols=55 Identities=11% Similarity=0.262 Sum_probs=46.9
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEee
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGFGNDI 210 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~ 210 (251)
.+.|.+++.. +.|.++.|+..+...+...|+..+....+.....++.|+|.....
T Consensus 87 IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~rlgl~~~~ 141 (179)
T PF12261_consen 87 IVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRRLGLPPTV 141 (179)
T ss_pred eeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHcCCCcee
Confidence 4456666655 588999999999999999999988888899999999999999854
No 131
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=38.75 E-value=38 Score=25.11 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=16.6
Q ss_pred EEEEEec--HhHHHHHHHCCCeEe
Q 025518 188 DIAALCS--EEERLFFEACGFGND 209 (251)
Q Consensus 188 ~I~l~~~--~~a~~fYek~GF~~~ 209 (251)
.|.+.|+ ..+.+||+++||+..
T Consensus 3 ~i~l~V~D~~~a~~FY~~LGf~~~ 26 (122)
T cd07235 3 AVGIVVADMAKSLDFYRRLGFDFP 26 (122)
T ss_pred eEEEEeccHHHHHHHHHHhCceec
Confidence 4566663 478889999999874
No 132
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=38.23 E-value=68 Score=28.16 Aligned_cols=40 Identities=18% Similarity=0.118 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEe------cHhHHHHHHHCCCeEee
Q 025518 171 RMIVQRILRMLTSREIYDIAALC------SEEERLFFEACGFGNDI 210 (251)
Q Consensus 171 ~~Ll~~i~~~~~~~gi~~I~l~~------~~~a~~fYek~GF~~~~ 210 (251)
..-..++++.++..|+++|.+.+ +.....||++.||+...
T Consensus 105 tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~ 150 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVN 150 (239)
T ss_pred eCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEee
Confidence 33455667777888999999987 45667799999999865
No 133
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=38.11 E-value=1.3e+02 Score=26.81 Aligned_cols=54 Identities=11% Similarity=0.132 Sum_probs=42.5
Q ss_pred CCeEEEEEEE--EecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 025518 136 NGQLVGFGRA--VSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (251)
Q Consensus 136 ~g~iVG~~~~--~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~ 192 (251)
.|++|+.+.. ..++-..+ ..+-||++.-..+|+..+-.=+..+++.|...++|-
T Consensus 159 ~G~LvAVavtDvL~dGlSsV---Y~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLG 214 (253)
T COG2935 159 EGKLVAVAVTDVLPDGLSSV---YTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLG 214 (253)
T ss_pred CCcEEEEEeeecccCcceeE---EEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEE
Confidence 6888887753 23433333 357899999999999999999999999999988875
No 134
>PF06849 DUF1246: Protein of unknown function (DUF1246); InterPro: IPR010672 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH []. Archaea do not appear to posses PurH, however, and perform these reactions by a different mecahnism []. In archaea, step i) is catalysed by the well-conserved PurP protein, while step ii) is catalysed by the PurO enzyme in some (though not all) species [, ]. This entry represents the N-terminal domain of PurP. Its function is not known, though it is almost always found in association with IPR009720 from INTERPRO.; GO: 0000287 magnesium ion binding, 0005524 ATP binding, 0016879 ligase activity, forming carbon-nitrogen bonds, 0006188 IMP biosynthetic process; PDB: 2PBZ_C 2R85_B 2R87_E 2R84_A 2R86_A 2R7L_A 2R7N_A 2R7K_A 2R7M_A.
Probab=37.24 E-value=79 Score=25.09 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=35.2
Q ss_pred HHHHHHHhCCCcEEEEEecHhHHHHHHHCCCeEeecCceeeEEeccCCCCCCChHHHHhhcceeeecC
Q 025518 176 RILRMLTSREIYDIAALCSEEERLFFEACGFGNDILGSTTMMYAKTASTGFGGSQMVKRAGRKLLLVP 243 (251)
Q Consensus 176 ~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 243 (251)
.+.+-|++.|...+.+ |.+....||++++|.. .++.-.++.+-.+.+..=+=..++.++||
T Consensus 11 qIl~GAk~EGFrT~~i-c~~~r~~~Y~~f~~iD------e~i~~d~f~di~~~~~q~~L~~~N~I~VP 71 (124)
T PF06849_consen 11 QILDGAKDEGFRTIAI-CQKGREKFYRRFPFID------EVIVLDSFSDILSEEVQEKLREMNAIFVP 71 (124)
T ss_dssp HHHHHHHHTT--EEEE-EETTCHHHHHTTTT-S------EEEEESSCGHCCSHHHHHHHHHTTEEE--
T ss_pred HHhhhHHHcCCcEEEE-ECCCCcchhhhcCcCc------EEEEeCCHHHHHhHHHHHHHHHCCeEEec
Confidence 4667788899887744 4677789999999653 24444555554444444333355656665
No 135
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=37.05 E-value=1.1e+02 Score=27.56 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=37.8
Q ss_pred CCeEEEEEEEEe-cCCc--eEEEEEEeeCCCcccCcHHHHH----HHHHHHHHHhCCCc
Q 025518 136 NGQLVGFGRAVS-DVGL--TASIHDIMVIPSLRQMGIGRMI----VQRILRMLTSREIY 187 (251)
Q Consensus 136 ~g~iVG~~~~~~-d~~~--~~~I~~l~V~p~~rg~GIG~~L----l~~i~~~~~~~gi~ 187 (251)
+|+++++-.++. +... ++..-+-.|||+++.--.|+.| ++.+.++++++|..
T Consensus 181 ~~~P~Aiqlv~k~es~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k~ 239 (264)
T PF07395_consen 181 NGQPCAIQLVYKVESPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGKP 239 (264)
T ss_pred CCcceEEEEEEEecCCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCCc
Confidence 899999987643 2222 2223357899999999999998 57777888777753
No 136
>PHA00432 internal virion protein A
Probab=35.18 E-value=1.9e+02 Score=23.33 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=15.9
Q ss_pred cHhHHHHHHHCCCeEeec
Q 025518 194 SEEERLFFEACGFGNDIL 211 (251)
Q Consensus 194 ~~~a~~fYek~GF~~~~~ 211 (251)
|..+++|.+.+||+...+
T Consensus 104 N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 104 NKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred CHHHHHHHHHcCeeeecc
Confidence 788999999999999763
No 137
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=33.00 E-value=1.8e+02 Score=25.91 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=26.3
Q ss_pred eEEEEEEeeCCCcccCcHHHHHHHHHHHHH
Q 025518 152 TASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (251)
Q Consensus 152 ~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~ 181 (251)
..-|.++-|.+.-|.+||++.|++.+....
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~~ 212 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCNF 212 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHhh
Confidence 455788999999999999999999998755
No 138
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.40 E-value=1.5e+02 Score=25.89 Aligned_cols=54 Identities=19% Similarity=0.150 Sum_probs=33.6
Q ss_pred HHHHHhCCCcEEEEEe------cHhHHHHHHHCCCeEeecCceeeEEeccCCCC-CCChHHHH
Q 025518 178 LRMLTSREIYDIAALC------SEEERLFFEACGFGNDILGSTTMMYAKTASTG-FGGSQMVK 233 (251)
Q Consensus 178 ~~~~~~~gi~~I~l~~------~~~a~~fYek~GF~~~~~~~~~~~~~~~~~~~-~~~~~~v~ 233 (251)
++-++..|+.+|.+.+ |.....|+++.||+... .+++-+..+.... .+|...+.
T Consensus 110 v~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~--~~~Lgi~dn~eigr~~P~~~y~ 170 (238)
T COG3473 110 VEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVD--FKGLGITDNLEIGRQEPWAVYR 170 (238)
T ss_pred HHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEE--eeccCCcccchhcccChHHHHH
Confidence 4445667888888887 55667799999999865 3334343443322 24444443
No 139
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=29.08 E-value=4.9e+02 Score=24.51 Aligned_cols=86 Identities=15% Similarity=0.015 Sum_probs=52.8
Q ss_pred ceEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhHHHHHHHCCC
Q 025518 127 QRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERLFFEACGF 206 (251)
Q Consensus 127 ~~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a~~fYek~GF 206 (251)
..+++++..+|++||++....++. ..|=-...-..++.+...=. ..-..+++|.+.|+..+..-+..+ .+ -..||
T Consensus 250 ~~~l~~A~~~g~~Va~aL~l~~~~-~LyGRYwG~~~~~~~LHFe~-cYYq~Ie~aI~~Gl~~f~~GaqGE-HK--~~RGf 324 (370)
T PF04339_consen 250 QVVLVVARRDGQPVAFALCLRGDD-TLYGRYWGCDEEIPFLHFEL-CYYQGIEYAIEHGLRRFEPGAQGE-HK--IARGF 324 (370)
T ss_pred CEEEEEEEECCeEEEEEEEEEeCC-EEEEeeecccccccCcchHH-HHHHHHHHHHHcCCCEEECCcchh-HH--HHcCC
Confidence 345556778999999998765533 33322334455566655322 245688999999998776665432 11 25899
Q ss_pred eEeecCceeeE
Q 025518 207 GNDILGSTTMM 217 (251)
Q Consensus 207 ~~~~~~~~~~~ 217 (251)
.+..+-+...+
T Consensus 325 ~P~~t~S~H~~ 335 (370)
T PF04339_consen 325 EPVPTYSAHWI 335 (370)
T ss_pred ccccceeeeee
Confidence 98775444443
No 140
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=28.63 E-value=1.8e+02 Score=26.64 Aligned_cols=51 Identities=12% Similarity=0.180 Sum_probs=36.6
Q ss_pred CCeEEEEEEEEe-cCCc--eEEEEEEeeCCCcccCcHHHHH----HHHHHHHHHhCCC
Q 025518 136 NGQLVGFGRAVS-DVGL--TASIHDIMVIPSLRQMGIGRMI----VQRILRMLTSREI 186 (251)
Q Consensus 136 ~g~iVG~~~~~~-d~~~--~~~I~~l~V~p~~rg~GIG~~L----l~~i~~~~~~~gi 186 (251)
+|+++|+-.+.. +... ....-+-.|||++..--+|+-| ++.+.+.++.++.
T Consensus 211 ~~~PcA~qlv~k~eSp~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K 268 (298)
T PRK15312 211 EGIPCAFDIVLKSESQMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQK 268 (298)
T ss_pred CCcceEEEEEEEecCCCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcCC
Confidence 899999987643 2222 2223357899999999999988 5777777777665
No 141
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=28.54 E-value=77 Score=23.52 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=13.6
Q ss_pred HhHHHHHHHCCCeEeec
Q 025518 195 EEERLFFEACGFGNDIL 211 (251)
Q Consensus 195 ~~a~~fYek~GF~~~~~ 211 (251)
..+.+||+.+||+....
T Consensus 13 ~~s~~FY~~LGf~~~~~ 29 (113)
T cd08356 13 AESKQFYQALGFELEWE 29 (113)
T ss_pred HHHHHHHHHhCCeeEec
Confidence 46778999999998653
No 142
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=28.39 E-value=63 Score=24.71 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=18.4
Q ss_pred CCcEEEEEec--HhHHHHHHHCCCeEe
Q 025518 185 EIYDIAALCS--EEERLFFEACGFGND 209 (251)
Q Consensus 185 gi~~I~l~~~--~~a~~fYek~GF~~~ 209 (251)
++..|.+.|. ..+.+||+++||+..
T Consensus 3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~ 29 (142)
T cd08353 3 RMDNVGIVVRDLEAAIAFFLELGLELE 29 (142)
T ss_pred eeeeEEEEeCCHHHHHHHHHHcCCEEc
Confidence 3456667773 567889999999864
No 143
>PHA01733 hypothetical protein
Probab=28.36 E-value=1.7e+02 Score=24.09 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=39.7
Q ss_pred eCCeEEEEEEEEec-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHh-CCCcEEEEEe---cHhHHHHHHHCCCeEe
Q 025518 135 SNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALC---SEEERLFFEACGFGND 209 (251)
Q Consensus 135 ~~g~iVG~~~~~~d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~-~gi~~I~l~~---~~~a~~fYek~GF~~~ 209 (251)
.||+++|.+.+..+ .+..+.++.|.-+-=.+ .-+.++..+.....+ .....|.-.+ |..+++|.+.+||+.+
T Consensus 54 ~nG~l~aI~Gv~~d~~~~vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~ 130 (153)
T PHA01733 54 PDGSLAGVAGLVEDMGNRVGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGL 130 (153)
T ss_pred cCCcEEEEecccccccCCCCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceee
Confidence 37889888866542 12233444443332222 223444444444432 2223233233 6788999999999987
Q ss_pred ec
Q 025518 210 IL 211 (251)
Q Consensus 210 ~~ 211 (251)
..
T Consensus 131 ~~ 132 (153)
T PHA01733 131 RY 132 (153)
T ss_pred cc
Confidence 63
No 144
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=28.35 E-value=1.8e+02 Score=27.48 Aligned_cols=74 Identities=9% Similarity=0.068 Sum_probs=41.4
Q ss_pred CCeEEEEEEEEecCCc-eEEEEEEeeCC--CcccCcHHHHHHHHHHHHHHhCCCcEEEEEe------------------c
Q 025518 136 NGQLVGFGRAVSDVGL-TASIHDIMVIP--SLRQMGIGRMIVQRILRMLTSREIYDIAALC------------------S 194 (251)
Q Consensus 136 ~g~iVG~~~~~~d~~~-~~~I~~l~V~p--~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~------------------~ 194 (251)
+++++|.+.+...... ...+..+-=-| +|...-+-..+++.+.+++++.++-.|.+.- +
T Consensus 44 ~~~v~aa~ll~~~~~~~g~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~~~g~~~~~~~~ 123 (406)
T PF02388_consen 44 GGEVAAAALLLRKKPFKGFKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERDEDGEPIEGEEN 123 (406)
T ss_dssp TS-EEEEEEEEEEECTTTCEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-TTS-EEEE-S-
T ss_pred CCeEEEEEEEEEeccCCceeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhcccccccccCcch
Confidence 4777776655332111 11122222235 7778889999999999999887765555442 1
Q ss_pred HhHHHHHHHCCCeEe
Q 025518 195 EEERLFFEACGFGND 209 (251)
Q Consensus 195 ~~a~~fYek~GF~~~ 209 (251)
......++++||.-.
T Consensus 124 ~~~~~~l~~~G~~~~ 138 (406)
T PF02388_consen 124 DELIENLKALGFRHQ 138 (406)
T ss_dssp THHHHHHHHTT-CCT
T ss_pred HHHHHHHHhcCceec
Confidence 234568999999974
No 145
>PHA02769 hypothetical protein; Provisional
Probab=27.41 E-value=57 Score=25.71 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHH---HhCCCcEEEEEe-cHhHHHHHHHCCCeEee
Q 025518 170 GRMIVQRILRML---TSREIYDIAALC-SEEERLFFEACGFGNDI 210 (251)
Q Consensus 170 G~~Ll~~i~~~~---~~~gi~~I~l~~-~~~a~~fYek~GF~~~~ 210 (251)
|..|+..+...+ +..|..-+...- .....++|.|.||+..+
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsnaly~kagfk~vg 138 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSNALYKKAGFKLVG 138 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCcchhHHhhhhhhHhc
Confidence 455665555544 445654443333 45678899999999854
No 146
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=26.78 E-value=1.2e+02 Score=22.33 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=17.8
Q ss_pred CcEEEEEec--HhHHHHHHHCCCeEee
Q 025518 186 IYDIAALCS--EEERLFFEACGFGNDI 210 (251)
Q Consensus 186 i~~I~l~~~--~~a~~fYek~GF~~~~ 210 (251)
+..+.+.++ ..+.+||+.+||+...
T Consensus 4 l~hv~l~v~Dl~~s~~FY~~lGl~~~~ 30 (113)
T cd07267 4 IAHVRFEHPDLDKAERFLTDFGLEVAA 30 (113)
T ss_pred EEEEEEccCCHHHHHHHHHHcCCEEEE
Confidence 345666663 4677899999998754
No 147
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=25.65 E-value=4.2e+02 Score=22.56 Aligned_cols=125 Identities=15% Similarity=0.119 Sum_probs=73.6
Q ss_pred CCCCHHHHHHHHHHcccCCCCCCCCCCcccccccccCHHHHHHHhhcccceeeeecccccCccccccccccccccCCcce
Q 025518 49 SDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQR 128 (251)
Q Consensus 49 ~~~D~~~l~~L~~~~~~~~~~f~~~~~~~gw~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 128 (251)
...|.+++.+|+..--- +|. .....+.++++-.+-...-++..
T Consensus 35 ~~~Dv~~v~~Ll~~yl~---~f~--------l~~~fs~eev~Hw~lp~~~Vv~s-------------------------- 77 (190)
T PF02799_consen 35 EEKDVPQVTKLLNKYLK---KFD--------LAPVFSEEEVKHWFLPRKNVVYS-------------------------- 77 (190)
T ss_dssp -GGGHHHHHHHHHHHHT---TSS--------EEEE--HHHHHHHHS-BTTTEEE--------------------------
T ss_pred chhhHHHHHHHHHHHHH---hcc--------cccccCHHHHHhhcccCCCeEEE--------------------------
Confidence 57799999999974411 232 12345777887666544333333
Q ss_pred EEEEEeeCCeEEEEEEEEe------cCC-----ceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEecHhH
Q 025518 129 VVPVTPSNGQLVGFGRAVS------DVG-----LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (251)
Q Consensus 129 ~v~va~~~g~iVG~~~~~~------d~~-----~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~~~a 197 (251)
+++.+++|+|-.|+.++. +.. ..+|+. ..|... -=-+.||+.++-.++..|..-.....--++
T Consensus 78 -yVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~aAY~f-Y~~~~~----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN 151 (190)
T PF02799_consen 78 -YVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLKAAYSF-YYVATS----TRLKELMNDALILAKNEGFDVFNALDLMDN 151 (190)
T ss_dssp -EEEEETTSEEEEEEEEEEEEEEESSSSSSSEEEEEEEE-EEEESS----SHHHHHHHHHHHHHHHTTESEEEEESTTTG
T ss_pred -EEEecCCCceeeEEEEeecceeecCCCCccceeeeeee-eeeecC----CCHHHHHHHHHHHHHHcCCCEEehhhhccc
Confidence 234445679999998643 111 122322 222222 234678888888899999887766665677
Q ss_pred HHHHHHCCCeEeecCceeeE
Q 025518 198 RLFFEACGFGNDILGSTTMM 217 (251)
Q Consensus 198 ~~fYek~GF~~~~~~~~~~~ 217 (251)
..|.+.+.|.... |...+.
T Consensus 152 ~~fL~~lKFg~Gd-G~L~YY 170 (190)
T PF02799_consen 152 SSFLEDLKFGPGD-GNLNYY 170 (190)
T ss_dssp GGTTTTTT-EEEE-EEEEEE
T ss_pred hhhHhhCCccCCC-CCeEEE
Confidence 7899999999865 344433
No 148
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=24.94 E-value=1.7e+02 Score=27.22 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=40.7
Q ss_pred CCeEEEEEEEEe------c-CCceEEEEEEeeCCCcccCcHHHHHHHHHHHHHHhCCCc
Q 025518 136 NGQLVGFGRAVS------D-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (251)
Q Consensus 136 ~g~iVG~~~~~~------d-~~~~~~I~~l~V~p~~rg~GIG~~Ll~~i~~~~~~~gi~ 187 (251)
..++|||+..+. + ......+.-+.|+.+.|++-+.--|++.+..++...|+-
T Consensus 142 t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~iw 200 (451)
T COG5092 142 TQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGIW 200 (451)
T ss_pred cceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhhH
Confidence 468999998532 1 122567788999999999999999999999998765543
No 149
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=24.65 E-value=92 Score=23.16 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=16.0
Q ss_pred EEEEEec--HhHHHHHHHCCCeEe
Q 025518 188 DIAALCS--EEERLFFEACGFGND 209 (251)
Q Consensus 188 ~I~l~~~--~~a~~fYek~GF~~~ 209 (251)
.+.+.|+ ..+.+||+.+||+..
T Consensus 3 ~v~l~V~Dl~~s~~FY~~lGf~~~ 26 (124)
T cd09012 3 FINLPVKDLEKSTAFYTALGFEFN 26 (124)
T ss_pred EEEeecCCHHHHHHHHHHCCCEEc
Confidence 3455553 467889999999974
No 150
>COG5270 PUA domain (predicted RNA-binding domain) [Translation, ribosomal structure and biogenesis]
Probab=23.69 E-value=74 Score=27.14 Aligned_cols=34 Identities=32% Similarity=0.535 Sum_probs=22.4
Q ss_pred eEEEEEeeCCeEEEEEEEEecCCceEEEEEEeeCCCcccCcH
Q 025518 128 RVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGI 169 (251)
Q Consensus 128 ~~v~va~~~g~iVG~~~~~~d~~~~~~I~~l~V~p~~rg~GI 169 (251)
.-++++++||+.+|++.+..+. ...+.|+ ||+|+
T Consensus 163 d~viVv~~ng~~vGVg~a~~~~-------~~~in~~-rG~~v 196 (202)
T COG5270 163 DEVIVVSENGRVVGVGIAKKSY-------EELINPE-RGTGV 196 (202)
T ss_pred CeEEEEecCCEEEEEEEEecCH-------HHhcCcc-cCccc
Confidence 3456666799999999776542 2346666 66653
No 151
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=22.16 E-value=1.5e+02 Score=21.67 Aligned_cols=27 Identities=30% Similarity=0.295 Sum_probs=20.0
Q ss_pred CCcEEEEEec--HhHHHHHHHCCCeEeec
Q 025518 185 EIYDIAALCS--EEERLFFEACGFGNDIL 211 (251)
Q Consensus 185 gi~~I~l~~~--~~a~~fYek~GF~~~~~ 211 (251)
++..|.+.++ ..+.+||+.+||+....
T Consensus 2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~ 30 (112)
T cd08344 2 SIDHFALEVPDLEVARRFYEAFGLDVREE 30 (112)
T ss_pred ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence 3556777774 46777999999998643
No 152
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=21.48 E-value=4.1e+02 Score=21.79 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=24.0
Q ss_pred CCCcccCcHHHHHHHHHHHHHHhCCCcEEEEEec-HhHHHHHHHCCCeEee
Q 025518 161 IPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS-EEERLFFEACGFGNDI 210 (251)
Q Consensus 161 ~p~~rg~GIG~~Ll~~i~~~~~~~gi~~I~l~~~-~~a~~fYek~GF~~~~ 210 (251)
..++|--|+|.++++ ..|+.+|.|.+| +....-.+.+|-+...
T Consensus 122 ~~d~R~ygigaqIL~-------dLGV~~~rLLtnnp~k~~~L~g~gleV~~ 165 (169)
T PF00925_consen 122 PEDLRDYGIGAQILR-------DLGVKKMRLLTNNPRKYVALEGFGLEVVE 165 (169)
T ss_dssp -S----THHHHHHHH-------HTT--SEEEE-S-HHHHHHHHHTT--EEE
T ss_pred ccccccHHHHHHHHH-------HcCCCEEEECCCChhHHHHHhcCCCEEEE
Confidence 466777777777664 469999999997 5555677878877654
Done!