Your job contains 1 sequence.
>025519
MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK
WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF
PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC
IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK
VEVVVNNQYTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025519
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180657 - symbol:HDA2 "AT5G26040" species:3702... 959 1.8e-96 1
UNIPROTKB|Q96DB2 - symbol:HDAC11 "Histone deacetylase 11"... 697 1.0e-68 1
UNIPROTKB|Q9GKU5 - symbol:HDAC11 "Histone deacetylase 11"... 697 1.0e-68 1
UNIPROTKB|I3LTU6 - symbol:LOC100738481 "Uncharacterized p... 694 2.1e-68 1
MGI|MGI:2385252 - symbol:Hdac11 "histone deacetylase 11" ... 693 2.7e-68 1
RGD|1311706 - symbol:Hdac11 "histone deacetylase 11" spec... 693 2.7e-68 1
UNIPROTKB|F1NYW6 - symbol:HDAC11 "Uncharacterized protein... 684 2.4e-67 1
ZFIN|ZDB-GENE-040704-7 - symbol:hdac11 "histone deacetyla... 683 3.1e-67 1
UNIPROTKB|F1MWX4 - symbol:HDAC11 "Uncharacterized protein... 682 4.0e-67 1
UNIPROTKB|B5MCV5 - symbol:HDAC11 "Histone deacetylase 11"... 635 3.8e-62 1
UNIPROTKB|E7ETT9 - symbol:HDAC11 "Histone deacetylase 11"... 635 3.8e-62 1
UNIPROTKB|F1PSI9 - symbol:HDAC11 "Uncharacterized protein... 632 7.9e-62 1
UNIPROTKB|F1SPG6 - symbol:F1SPG6 "Uncharacterized protein... 625 4.3e-61 1
WB|WBGene00007953 - symbol:hda-11 species:6239 "Caenorhab... 563 1.6e-54 1
UNIPROTKB|Q18477 - symbol:hda-11 "Protein HDA-11" species... 563 1.6e-54 1
UNIPROTKB|C9JEC8 - symbol:HDAC11 "Histone deacetylase 11"... 556 8.9e-54 1
FB|FBgn0051119 - symbol:HdacX "Histone deacetylase X" spe... 552 2.4e-53 1
UNIPROTKB|C9J2I7 - symbol:HDAC11 "Histone deacetylase 11"... 522 3.6e-50 1
UNIPROTKB|B5MCQ6 - symbol:HDAC11 "Histone deacetylase 11"... 229 3.5e-36 2
UNIPROTKB|B5MCU6 - symbol:HDAC11 "Histone deacetylase 11"... 230 6.1e-31 2
UNIPROTKB|Q658J9 - symbol:DKFZp434L0312 "Histone deacetyl... 273 8.7e-24 1
UNIPROTKB|C9JMH0 - symbol:HDAC11 "Histone deacetylase 11"... 262 1.3e-22 1
UNIPROTKB|C9J528 - symbol:HDAC11 "Histone deacetylase 11"... 234 1.2e-19 1
UNIPROTKB|C9JBI4 - symbol:HDAC11 "Histone deacetylase 11"... 233 1.5e-19 1
UNIPROTKB|B5MC52 - symbol:HDAC11 "Histone deacetylase 11"... 229 4.0e-19 1
UNIPROTKB|Q47YS1 - symbol:CPS_3373 "Histone deacetylase f... 200 4.7e-16 1
TIGR_CMR|CPS_3373 - symbol:CPS_3373 "histone deacetylase ... 200 4.7e-16 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 203 7.6e-16 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 203 7.6e-16 1
UNIPROTKB|Q4K5L2 - symbol:PFL_5403 "Histone deacetylase f... 192 4.5e-15 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 194 7.0e-15 1
UNIPROTKB|Q9KQF6 - symbol:VC_2042 "Histone deacetylase/Ac... 188 1.4e-14 1
TIGR_CMR|VC_2042 - symbol:VC_2042 "histone deacetylase/Ac... 188 1.4e-14 1
UNIPROTKB|Q8EFZ9 - symbol:SO_1815 "Histone deacetylase su... 184 3.8e-14 1
TIGR_CMR|SO_1815 - symbol:SO_1815 "histone deacetylase/Ac... 184 3.8e-14 1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s... 182 3.8e-14 1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s... 182 3.8e-14 1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"... 181 4.9e-14 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 185 1.3e-13 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 182 1.5e-13 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 182 1.6e-13 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 182 1.9e-13 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 179 3.2e-13 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 179 3.2e-13 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 182 8.1e-13 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 182 8.1e-13 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 182 8.1e-13 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 178 8.2e-13 1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 178 8.2e-13 1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 182 1.3e-12 1
UNIPROTKB|B5MD06 - symbol:HDAC11 "Histone deacetylase 11,... 167 1.5e-12 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 176 3.6e-12 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 176 3.6e-12 1
UNIPROTKB|Q48DS3 - symbol:PSPPH_4352 "Histone deacetylase... 173 6.5e-12 1
UNIPROTKB|B5MCS3 - symbol:HDAC11 "Histone deacetylase 11"... 156 2.2e-11 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 173 2.3e-11 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 173 2.3e-11 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 173 2.3e-11 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 173 2.3e-11 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 173 2.3e-11 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 173 2.6e-11 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 172 3.3e-11 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 172 3.3e-11 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 172 3.3e-11 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 172 3.3e-11 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 172 4.2e-11 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 172 4.6e-11 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 171 5.0e-11 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 171 5.0e-11 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 171 5.1e-11 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 171 5.2e-11 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 174 5.5e-11 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 168 1.5e-10 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 167 2.0e-10 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 164 3.1e-10 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 164 3.1e-10 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 165 3.3e-10 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 165 3.3e-10 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 166 3.6e-10 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 164 4.6e-10 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 164 4.6e-10 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 164 4.7e-10 1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s... 129 7.3e-10 2
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 161 9.8e-10 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 143 1.3e-09 2
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s... 140 1.7e-09 1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 157 4.6e-09 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 156 5.2e-09 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 156 5.2e-09 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 159 5.4e-09 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 159 5.4e-09 1
UNIPROTKB|E1BQQ2 - symbol:Gga.27678 "Uncharacterized prot... 145 9.4e-09 1
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 133 1.1e-08 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 153 1.4e-08 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 155 1.4e-08 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 151 1.7e-08 1
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 143 2.0e-08 2
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 143 2.3e-08 2
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 150 2.5e-08 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 149 2.6e-08 1
WARNING: Descriptions of 84 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 178/236 (75%), Positives = 205/236 (86%)
Query: 9 VTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL 68
+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKWGR+C+FL
Sbjct: 48 MATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL 107
Query: 69 SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRK 128
S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FPN LVQ+K
Sbjct: 108 VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQK 167
Query: 129 VLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL 188
VLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCIH+AF++L
Sbjct: 168 VLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRL 227
Query: 189 NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKVEV+
Sbjct: 228 RISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVM 283
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 131/222 (59%), Positives = 166/222 (74%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 131/222 (59%), Positives = 166/222 (74%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 131/222 (59%), Positives = 165/222 (74%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 3 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEA 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 63 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 123 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 182
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 183 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 224
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 131/222 (59%), Positives = 164/222 (73%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVEL 225
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 131/222 (59%), Positives = 164/222 (73%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVEL 225
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 128/221 (57%), Positives = 165/221 (74%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + + IV+
Sbjct: 4 TELYEGVPPTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGDDLIVQAR 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 64 EATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRTQTGGTIMA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ IIDLDAHQ
Sbjct: 124 GKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF +D RVYI+D +N IYP D A+R I +KVE+
Sbjct: 184 GNGHERDFMNDHRVYIMDAYNRYIYPGDGFAKRAIKRKVEL 224
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 127/221 (57%), Positives = 166/221 (75%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY ++P LP++YSP+Y+I+F+G+EKLHPFD+ KWG++ +FL E F+ IV
Sbjct: 16 TELYAEVPASCLPIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFITDEIIVLAR 75
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS+ DLLVVH+ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+A
Sbjct: 76 EASEADLLVVHTARYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMA 135
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ ++ IIDLDAHQ
Sbjct: 136 GKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQ 195
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+
Sbjct: 196 GNGHERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRKVEL 236
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 128/221 (57%), Positives = 163/221 (73%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+FLG+EKLHPFD+ KWG++ L E L + +VE
Sbjct: 4 TQLYQHVPDSRWPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAR 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 64 EASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+ I+DLDAHQ
Sbjct: 124 GKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 GNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 224
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 121/197 (61%), Positives = 147/197 (74%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 181 YPGDRFAKQAIRRKVEL 197
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 121/197 (61%), Positives = 147/197 (74%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 181 YPGDRFAKQAIRRKVEL 197
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 120/197 (60%), Positives = 145/197 (73%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR I+DLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 181 YPGDRFAKQAIRRKVEL 197
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 122/222 (54%), Positives = 156/222 (70%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 3 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEA 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PP L QRKVL P R +
Sbjct: 63 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPCHLPAQLPGQRKVLKPLRPDRFKCVK 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 123 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 182
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 183 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 224
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 100/216 (46%), Positives = 144/216 (66%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
F + ++ P++Y +Y+++ GIE LHPFDSSKW R+ L + +VEP +
Sbjct: 10 FSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTF 69
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q GGT+LAA LA
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLA 129
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ GWAINVGGGFHH S GGGFC YADI++ I F + I+ +++DLDAHQGNGH
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+DF+ + V++ D+FNP +YP D EAR+FI++ V V
Sbjct: 190 RDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHV 225
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 100/216 (46%), Positives = 144/216 (66%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
F + ++ P++Y +Y+++ GIE LHPFDSSKW R+ L + +VEP +
Sbjct: 10 FSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTF 69
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q GGT+LAA LA
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLA 129
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ GWAINVGGGFHH S GGGFC YADI++ I F + I+ +++DLDAHQGNGH
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+DF+ + V++ D+FNP +YP D EAR+FI++ V V
Sbjct: 190 RDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHV 225
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 105/164 (64%), Positives = 124/164 (75%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDF 210
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDF 164
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 108/212 (50%), Positives = 144/212 (67%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYI DM+N +YPRD+ A+ I VE+
Sbjct: 211 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVEL 242
>UNIPROTKB|C9J2I7 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879880 ProteinModelPortal:C9J2I7
STRING:C9J2I7 Ensembl:ENST00000458642 BindingDB:C9J2I7
ArrayExpress:C9J2I7 Bgee:C9J2I7 Uniprot:C9J2I7
Length = 186
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 96/159 (60%), Positives = 120/159 (75%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI 162
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 229 (85.7 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
Score = 177 (67.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
ISR IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 93 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 146
>UNIPROTKB|B5MCU6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00790809
ProteinModelPortal:B5MCU6 STRING:B5MCU6 Ensembl:ENST00000404040
ArrayExpress:B5MCU6 Bgee:B5MCU6 Uniprot:B5MCU6
Length = 247
Score = 230 (86.0 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSS 105
EAS+EDLLVVH+ YL L+ +
Sbjct: 64 REASEEDLLVVHTRRYLNELKGN 86
Score = 126 (49.4 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
L+ +GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 80 LNELKGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 125
>UNIPROTKB|Q658J9 [details] [associations]
symbol:DKFZp434L0312 "Histone deacetylase 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CH471055 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124
UniGene:Hs.404802 HGNC:HGNC:19086 HOGENOM:HOG000140749
EMBL:AL834223 IPI:IPI00470376 STRING:Q658J9 Ensembl:ENST00000433119
UCSC:uc010heb.3 Uniprot:Q658J9
Length = 236
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 95
>UNIPROTKB|C9JMH0 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 OrthoDB:EOG4PVNZV
IPI:IPI00879927 ProteinModelPortal:C9JMH0 SMR:C9JMH0 STRING:C9JMH0
Ensembl:ENST00000416248 BindingDB:C9JMH0 ArrayExpress:C9JMH0
Bgee:C9JMH0 Uniprot:C9JMH0
Length = 92
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/92 (55%), Positives = 63/92 (68%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
V+ I E+PPV PN LVQRKVL P R Q GG
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 92
>UNIPROTKB|C9J528 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00879695 ProteinModelPortal:C9J528 SMR:C9J528 STRING:C9J528
Ensembl:ENST00000418189 BindingDB:C9J528 ArrayExpress:C9J528
Bgee:C9J528 Uniprot:C9J528
Length = 107
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 42/86 (48%), Positives = 62/86 (72%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +
Sbjct: 20 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSML 79
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSS 105
VE EAS+EDLLVVH+ YL L+ S
Sbjct: 80 VEAREASEEDLLVVHTRRYLNELKWS 105
>UNIPROTKB|C9JBI4 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00880085 ProteinModelPortal:C9JBI4 SMR:C9JBI4 STRING:C9JBI4
Ensembl:ENST00000434848 HOGENOM:HOG000140749 BindingDB:C9JBI4
ArrayExpress:C9JBI4 Bgee:C9JBI4 Uniprot:C9JBI4
Length = 168
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 41/84 (48%), Positives = 61/84 (72%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +
Sbjct: 20 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSML 79
Query: 80 VEPLEASKEDLLVVHSESYLKSLQ 103
VE EAS+EDLLVVH+ YL L+
Sbjct: 80 VEAREASEEDLLVVHTRRYLNELK 103
>UNIPROTKB|B5MC52 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00877992 ProteinModelPortal:B5MC52 SMR:B5MC52 STRING:B5MC52
PRIDE:B5MC52 Ensembl:ENST00000404548 HOGENOM:HOG000074071
HOVERGEN:HBG104774 ArrayExpress:B5MC52 Bgee:B5MC52 Uniprot:B5MC52
Length = 146
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 59/195 (30%), Positives = 97/195 (49%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L + G + N +P + +++ V+
Sbjct: 4 PLVFHPIY--SQLELPIRHRFPIEKYVGIRNALVANG-VPNNWFKKPTPVNPDNVKTVYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+Y+ L ++ S + + FP L++R + VGGTI+ A+LA E G +
Sbjct: 61 PTYIHQLINNQLDSKAMR--RIG-FPWSQQLIERTLT-----AVGGTIMTAQLALEYGKS 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N+ GG+HH A+ G GFC D+ L NIS+V+I D D HQG+G K S++
Sbjct: 113 LNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNN 172
Query: 214 SRVYILDMFNPGIYP 228
V+ + + +P
Sbjct: 173 QNVFTVSIHGEKNFP 187
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 59/195 (30%), Positives = 97/195 (49%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L + G + N +P + +++ V+
Sbjct: 4 PLVFHPIY--SQLELPIRHRFPIEKYVGIRNALVANG-VPNNWFKKPTPVNPDNVKTVYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+Y+ L ++ S + + FP L++R + VGGTI+ A+LA E G +
Sbjct: 61 PTYIHQLINNQLDSKAMR--RIG-FPWSQQLIERTLT-----AVGGTIMTAQLALEYGKS 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N+ GG+HH A+ G GFC D+ L NIS+V+I D D HQG+G K S++
Sbjct: 113 LNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNN 172
Query: 214 SRVYILDMFNPGIYP 228
V+ + + +P
Sbjct: 173 QNVFTVSIHGEKNFP 187
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 203 (76.5 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 38 IYSPDY-DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYS D+ SF HPF+ + L GF+ + I+ P A+ E++ +H+E
Sbjct: 6 IYSDDFRGYSF---SPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTE 62
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y+ + L+ S ++ + +FPN +L VGGT+ A A L
Sbjct: 63 EYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVL 116
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+G
Sbjct: 117 SGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 176 QWSFYDDPNVCTISLHETGRY 196
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 203 (76.5 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 38 IYSPDY-DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYS D+ SF HPF+ + L GF+ + I+ P A+ E++ +H+E
Sbjct: 6 IYSDDFRGYSF---SPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTE 62
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y+ + L+ S ++ + +FPN +L VGGT+ A A L
Sbjct: 63 EYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVL 116
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+G
Sbjct: 117 SGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 176 QWSFYDDPNVCTISLHETGRY 196
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 192 (72.6 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 54/171 (31%), Positives = 79/171 (46%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F E H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEFPA-E--HRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y++ S +S + + L +R V + VGG++LAA+ A E G A
Sbjct: 60 DPAYIERYMSG-ELSREDQRRLGLPWSEALARRTV-----RAVGGSLLAAEQALEHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 114 HLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDG 164
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 194 (73.4 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 63/198 (31%), Positives = 96/198 (48%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + K+ P +S + + + LD I++P AS E++ H+++
Sbjct: 19 VYSPEYAALCDSLCKV-PKRASM---VHSLIEAYSLLDHMMIIKPKVASMEEMASFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAK--LAKERGW 152
YL+ LQ S E L +C + + + VGG TI AA+ L +
Sbjct: 75 YLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLLDGKCKV 133
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ R++ IDLD H G+G E FS
Sbjct: 134 AINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRQKFDRILYIDLDLHHGDGVEDAFSF 191
Query: 213 DSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 192 TSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 188 (71.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK--WGRIC-QFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + I Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H Y+++L +S ++ + FP L++R LY VGGT L + A +
Sbjct: 62 RLHDPDYVQALLEG-TLSAA-KMRRIG-FPWSKPLIER-TLY----SVGGTCLTVEQALQ 113
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G+G
Sbjct: 114 SGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDG 169
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 188 (71.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK--WGRIC-QFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + I Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H Y+++L +S ++ + FP L++R LY VGGT L + A +
Sbjct: 62 RLHDPDYVQALLEG-TLSAA-KMRRIG-FPWSKPLIER-TLY----SVGGTCLTVEQALQ 113
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G+G
Sbjct: 114 SGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDG 169
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 184 (69.8 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + E+++ VH
Sbjct: 2 IPLVYHASY--SKLALPIHHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + + S + + FP LV+R + + GT L A LA + G
Sbjct: 60 HRDYVEQFIDGTLATSALRRIG----FPWSEALVERTL-----HSLAGTSLTAALALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH + G G+C + D+ + ++ + +++I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDG 164
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 184 (69.8 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + E+++ VH
Sbjct: 2 IPLVYHASY--SKLALPIHHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + + S + + FP LV+R + + GT L A LA + G
Sbjct: 60 HRDYVEQFIDGTLATSALRRIG----FPWSEALVERTL-----HSLAGTSLTAALALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH + G G+C + D+ + ++ + +++I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDG 164
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKL 146
+ H+++YL+ LQ S + L +C + + + +GG TI AA+
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 147 AKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ G AIN GG+HH DE GFC D L I ++ R++ +DLD H G
Sbjct: 126 LID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHG 182
Query: 204 NGHEKDFSSDSRVYILDM--FNPGIYP 228
+G E FS S+V + + F+PG +P
Sbjct: 183 DGVEDAFSFTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKL 146
+ H+++YL+ LQ S + L +C + + + +GG TI AA+
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 147 AKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ G AIN GG+HH DE GFC D L I ++ R++ +DLD H G
Sbjct: 126 LID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHG 182
Query: 204 NGHEKDFSSDSRVYILDM--FNPGIYP 228
+G E FS S+V + + F+PG +P
Sbjct: 183 DGVEDAFSFTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ P +S + + + + IV+P AS E++ H+++
Sbjct: 19 IYSPEYVSMCDSLAKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW-- 152
YL+ LQ S + L +C + + + VGG TI AA+ + G
Sbjct: 75 YLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLID-GMCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 185 (70.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/213 (31%), Positives = 99/213 (46%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
SS F I KLPL YS D+ + HP + L + G K I P
Sbjct: 3 SSGSVFLIVSLKLPLFYSSG-DVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRP 61
Query: 83 LEASKEDLLVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVG 138
+A+ E++ HS+ Y+K L+S P N+S ++ + +C V L+ F + G
Sbjct: 62 HKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSAG 120
Query: 139 GTI---LAAKLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
G++ A KL K++ A+N GG HH E GFC DI L I ++ + RV+
Sbjct: 121 GSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVL 178
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
ID+D H G+G E+ F + RV + G Y
Sbjct: 179 YIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEY 211
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 182 (69.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKL 146
+ H+++YL+ LQ S + L +C + + + +GG TI AA+
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 147 AKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ G AIN GG+HH DE GFC D L I ++ R++ +DLD H G
Sbjct: 126 LID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHG 182
Query: 204 NGHEKDFSSDSRVYILDM--FNPGIYP 228
+G E FS S+V + + F+PG +P
Sbjct: 183 DGVEDAFSFTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 182 (69.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ P +S + + + + IV+P AS E++ H+++
Sbjct: 19 IYSPEYVSMCDSLAKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW-- 152
YL+ LQ S + L +C + + + VGG TI AA+ + G
Sbjct: 75 YLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLID-GMCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 182 (69.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ P +S + + + + IV+P AS E++ H+++
Sbjct: 57 IYSPEYVSMCDSLAKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 112
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW-- 152
YL+ LQ S + L +C + + + VGG TI AA+ + G
Sbjct: 113 YLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLID-GMCK 170
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 171 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 228
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 229 FTSKVMTVSLHKFSPGFFP 247
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 179 (68.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 60/199 (30%), Positives = 96/199 (48%)
Query: 38 IYSPDYDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP+Y +S + K+ P +S + + + + IV+P AS E++ H++
Sbjct: 19 IYSPEY-VSICDSLVKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 97 SYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW- 152
+YL+ LQ S + L +C + + + +GG TI AA+ +
Sbjct: 74 AYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGI-FDYAAAIGGGTITAAQCLIDGKCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 179 (68.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 60/199 (30%), Positives = 96/199 (48%)
Query: 38 IYSPDYDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP+Y +S + K+ P +S + + + + IV+P AS E++ H++
Sbjct: 19 IYSPEY-VSICDSLVKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMATFHTD 73
Query: 97 SYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW- 152
+YL+ LQ S + L +C + + + +GG TI AA+ +
Sbjct: 74 AYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGI-FDYAAAIGGGTITAAQCLIDGKCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 182 (69.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 60/212 (28%), Positives = 102/212 (48%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 428 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 486
Query: 94 HSESYLKSLQSSPNVSI--IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KL 146
H++ L+ L+++ + ++E F + + R L RK VG + + K
Sbjct: 487 HTKKMLEHLRTTETMKDEELMEEAEKE-FNSIYLTRDTLKVARKAVGAVLQSVDEIFEKD 545
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG
Sbjct: 546 AGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGT 605
Query: 207 EKDFSSDSRVYILDM-------FNPGIYPRDY 231
++ F DS V + + F P P+DY
Sbjct: 606 QEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 637
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSP-----N 107
HP S + +I + L+ L+K ++ LE DL V H +S +K L S +
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 108 VSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
++ E V + N + K + + I+A + + G+A+ G HH +
Sbjct: 94 INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHADSV 150
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 199
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 182 (69.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 60/212 (28%), Positives = 102/212 (48%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 430 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 488
Query: 94 HSESYLKSLQSSPNVSI--IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KL 146
H++ L+ L+++ + ++E F + + R L RK VG + + K
Sbjct: 489 HTKKMLEHLRTTETMKDEELMEEAEKE-FNSIYLTRDTLKVARKAVGAVLQSVDEIFEKD 547
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG
Sbjct: 548 AGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGT 607
Query: 207 EKDFSSDSRVYILDM-------FNPGIYPRDY 231
++ F DS V + + F P P+DY
Sbjct: 608 QEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 639
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSP-----N 107
HP S + +I + L+ L+K ++ LE DL V H +S +K L S +
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 108 VSIIIE-VPPVAL--FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCS 164
++ E V + F N + K + + I+A + + G+A+ G HH
Sbjct: 94 INSQCEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHAD 150
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 201
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 182 (69.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 60/212 (28%), Positives = 102/212 (48%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 430 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 488
Query: 94 HSESYLKSLQSSPNVSI--IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KL 146
H++ L+ L+++ + ++E F + + R L RK VG + + K
Sbjct: 489 HTKKMLEHLRTTETMKDEELMEEAEKE-FNSIYLTRDTLKVARKAVGAVLQSVDEIFEKD 547
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG
Sbjct: 548 AGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGT 607
Query: 207 EKDFSSDSRVYILDM-------FNPGIYPRDY 231
++ F DS V + + F P P+DY
Sbjct: 608 QEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 639
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSP-----N 107
HP S + +I + L+ L+K ++ LE DL V H +S +K L S +
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 108 VSIIIE-VPPVAL--FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCS 164
++ E V + F N + K + + I+A + + G+A+ G HH
Sbjct: 94 INSQCEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHAD 150
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 201
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 178 (67.7 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ P +S + + + + IV+P AS E++ H+++
Sbjct: 19 IYSPEYVSVCDSLAKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMASFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW-- 152
YL+ LQ S + L +C + + + VGG TI AA+ + G
Sbjct: 75 YLQHLQKVSEDGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLID-GMCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 178 (67.7 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ P +S + + + + IV+P AS E++ H+++
Sbjct: 19 IYSPEYVSVCDSLAKV-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEEMASFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKLAKERGW-- 152
YL+ LQ S + L +C + + + VGG TI AA+ + G
Sbjct: 75 YLQHLQKVSEDGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLID-GMCK 132
Query: 153 -AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 133 VAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFS 190
Query: 212 SDSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 191 FTSKVMTVSLHKFSPGFFP 209
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 182 (69.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 55/168 (32%), Positives = 85/168 (50%)
Query: 68 LSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLV 125
+ + G L +V+P AS E++ V H++SYL+ L S + + L +C V
Sbjct: 1044 IEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCPV 1103
Query: 126 QRKVLYPFRKQVGG-TILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIH 182
+ + + VGG T+ AA+ L + AIN GG+HH DE GFC D L I
Sbjct: 1104 VEGI-FDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI- 1161
Query: 183 YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ RV+ +D+D H G+G E FS S+V + + F+PG +P
Sbjct: 1162 -LKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFP 1208
>UNIPROTKB|B5MD06 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11, isoform CRA_h"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CH471055
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC027124 UniGene:Hs.404802 HGNC:HGNC:19086
HOGENOM:HOG000074071 HOVERGEN:HBG104774 IPI:IPI00879882 SMR:B5MD06
STRING:B5MD06 Ensembl:ENST00000405025 Uniprot:B5MD06
Length = 118
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK 56
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 176 (67.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 59/201 (29%), Positives = 94/201 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K LIYS DY +S+ E HP + ++ + + L + I+ P A+ ++L +V
Sbjct: 4 KAYLIYSDDY-LSYRLAED-HPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLV 61
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV----GGTILAAKLAKE 149
H +Y++++ N+S E + F V + GG+ L A+L E
Sbjct: 62 HDPAYVEAVM---NLSKNPENVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYE 118
Query: 150 RGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
G A N+ GG HH D GFC Y D+++ I F + + +V +DLDAH G+G
Sbjct: 119 -GEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIA-KFREKGL-KVAYVDLDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F SD V + + G Y
Sbjct: 176 QWLFYSDPGVLTISIHETGRY 196
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 176 (67.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 59/201 (29%), Positives = 94/201 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K LIYS DY +S+ E HP + ++ + + L + I+ P A+ ++L +V
Sbjct: 4 KAYLIYSDDY-LSYRLAED-HPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLV 61
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV----GGTILAAKLAKE 149
H +Y++++ N+S E + F V + GG+ L A+L E
Sbjct: 62 HDPAYVEAVM---NLSKNPENVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYE 118
Query: 150 RGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
G A N+ GG HH D GFC Y D+++ I F + + +V +DLDAH G+G
Sbjct: 119 -GEADHVFNIAGGLHHALRDAASGFCIYNDLAVAIA-KFREKGL-KVAYVDLDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F SD V + + G Y
Sbjct: 176 QWLFYSDPGVLTISIHETGRY 196
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 51/172 (29%), Positives = 79/172 (45%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV- 93
LPLIY DY F H F K+ + +L G ++ P E D+L +
Sbjct: 3 LPLIYHEDYSPDFPAD---HRFPMDKFRLLRDYLVDSGLTSDVQLMRP-ELCPADILALA 58
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H SY+ S + ++S + + L +R V VGG++L A+ A + G A
Sbjct: 59 HDPSYI-SRYLNGDLSREDQRRLGLPWSEALARRTV-----SAVGGSLLTAEQALKHGMA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ Y + +V+I D D HQG+G
Sbjct: 113 CHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDG 164
>UNIPROTKB|B5MCS3 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00878794
ProteinModelPortal:B5MCS3 STRING:B5MCS3 Ensembl:ENST00000402259
ArrayExpress:B5MCS3 Bgee:B5MCS3 Uniprot:B5MCS3
Length = 181
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/98 (36%), Positives = 58/98 (59%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E K VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLK-EAIRRK---VE- 58
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
LE ED + YL ++ + S+ +P V ++
Sbjct: 59 LEWGTED------DEYLDKVERNIKKSLQEHLPDVVVY 90
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 173 (66.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/200 (30%), Positives = 94/200 (47%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + L + G K I P +A+ E++
Sbjct: 8 KRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 67
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K
Sbjct: 68 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSAGGSVASAVKLNK 126
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 184
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 185 EAFYTTDRVMTVSFHKYGEY 204
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 173 (66.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 61/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL K
Sbjct: 69 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNK 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ AIN GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 186 EAFYTTDRVMTVSFHKYGEY 205
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 173 (66.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/200 (30%), Positives = 94/200 (47%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + L + G K I P +A+ E++
Sbjct: 8 KRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 67
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K
Sbjct: 68 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNK 126
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 184
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 185 EAFYTTDRVMTVSFHKYGEY 204
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 173 (66.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/200 (30%), Positives = 94/200 (47%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + L + G K I P +A+ E++
Sbjct: 8 KRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 67
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K
Sbjct: 68 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNK 126
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 184
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 185 EAFYTTDRVMTVSFHKYGEY 204
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 173 (66.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/200 (30%), Positives = 94/200 (47%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + L + G K I P +A+ E++
Sbjct: 8 KRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 67
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K
Sbjct: 68 HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNK 126
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 184
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 185 EAFYTTDRVMTVSFHKYGEY 204
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 173 (66.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 62/200 (31%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ +++
Sbjct: 6 KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y++ L+S P N+S ++ + +C V LY F + GG++ AA KL K
Sbjct: 66 HSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDG-LYEFCQLSAGGSVAAAVKLNK 124
Query: 149 ERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ IN GGG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGI-LELLKYH-QRVLYIDIDVHHGDGVE 182
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 183 EAFYTTDRVMTVSFHKYGEY 202
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 172 (65.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 186 EAFYTTDRVMTVSFHKYGEY 205
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 172 (65.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 186 EAFYTTDRVMTVSFHKYGEY 205
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 172 (65.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 186 EAFYTTDRVMTVSFHKYGEY 205
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 172 (65.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 186 EAFYTTDRVMTVSFHKYGEY 205
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 172 (65.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 71 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 130
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 131 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 189
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 190 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 247
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 248 EAFYTTDRVMTVSFHKYGEY 267
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 172 (65.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 103 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 162
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 163 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 221
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 222 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 279
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 280 EAFYTTDRVMTVSFHKYGEY 299
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 171 (65.3 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 13 YYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDY 72
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GW 152
+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K++
Sbjct: 73 IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNKQQTDI 131
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E+ F +
Sbjct: 132 AVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVEEAFYT 189
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 190 TDRVMTVSFHKYGEY 204
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 171 (65.3 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 13 YYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDY 72
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GW 152
+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K++
Sbjct: 73 IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNKQQTDI 131
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E+ F +
Sbjct: 132 AVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVEEAFYT 189
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 190 TDRVMTVSFHKYGEY 204
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 171 (65.3 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 13 YYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDY 72
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GW 152
+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K++
Sbjct: 73 IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNKQQTDI 131
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E+ F +
Sbjct: 132 AVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVEEAFYT 189
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 190 TDRVMTVSFHKYGEY 204
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 171 (65.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 13 YYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDY 72
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GW 152
+K L+S P N+S ++ + +C V L+ F + GG++ +A KL K++
Sbjct: 73 IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVASAVKLNKQQTDI 131
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E+ F +
Sbjct: 132 AVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVEEAFYT 189
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 190 TDRVMTVSFHKYGEY 204
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 174 (66.3 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 45/170 (26%), Positives = 87/170 (51%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCI-VEPLEASKEDLLVVHSESYLKSLQSSPNVS--- 109
HP ++ + + L +EG L + C+ VE ++++LL+VH++ Y++ ++S+ N++
Sbjct: 82 HPECPARVSTVMEMLETEGLLGR-CVQVEARAVTEDELLLVHTKEYVELMKSTQNMTEEE 140
Query: 110 ---IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
+ + V L P + Q+ ++ ++L G++IN G HH AD
Sbjct: 141 LKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQL--RNGFSINRPPG-HHAQAD 197
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ GFC + ++++ YA + + RV+I+D D H G G + F D V
Sbjct: 198 KMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSV 247
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 55/180 (30%), Positives = 86/180 (47%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVSII 111
HP + L + G K I P +A+ E++ HS+ Y+K L+S P N+S
Sbjct: 29 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEY 88
Query: 112 I-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GWAINVGGGFHHCSADE 167
++ + +C V L+ F + GG++ A KL +++ A+N GG HH E
Sbjct: 89 SKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSE 147
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC DI L I ++ + RV+ ID+D H G+G E+ F + RV + G Y
Sbjct: 148 ASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEY 205
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 167 (63.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/189 (30%), Positives = 90/189 (47%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D DI + HP + L + G K I P +A+ E++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L+S P N+S ++ + +C V L+ F + GG++ A KL +
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNR 127
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 185
Query: 208 KDFSSDSRV 216
+ F + RV
Sbjct: 186 EAFYTTDRV 194
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/198 (28%), Positives = 96/198 (48%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD-KNC-IVEPLEASKEDLLVVH 94
LIYS D+ G + HPF ++ + + + G ++ N I++ A++E LL H
Sbjct: 7 LIYSNDFARFSYGDD--HPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTFH 64
Query: 95 SESYLKSLQS-SPNVSIIIEVP-PVALFPNCLVQRKVLYPF-RKQVGGTILAAKLAKERG 151
+ YL L+ S + + + N + + LY + R GGTI AA+L E G
Sbjct: 65 APDYLDRLREFSESDDARADFRYGLGDLDNPVFRG--LYDWARLGAGGTIEAARLVAEEG 122
Query: 152 W--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+ A N+ GG+HH + GF D + I+ ++ + RV +D+DAH G+G ++
Sbjct: 123 YDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINL-LLEKGL-RVAYLDIDAHHGDGVQEA 180
Query: 210 FSSDSRVYILDMFNPGIY 227
F RV + + G+Y
Sbjct: 181 FYDTDRVLTISIHESGMY 198
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/198 (28%), Positives = 96/198 (48%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD-KNC-IVEPLEASKEDLLVVH 94
LIYS D+ G + HPF ++ + + + G ++ N I++ A++E LL H
Sbjct: 7 LIYSNDFARFSYGDD--HPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTFH 64
Query: 95 SESYLKSLQS-SPNVSIIIEVP-PVALFPNCLVQRKVLYPF-RKQVGGTILAAKLAKERG 151
+ YL L+ S + + + N + + LY + R GGTI AA+L E G
Sbjct: 65 APDYLDRLREFSESDDARADFRYGLGDLDNPVFRG--LYDWARLGAGGTIEAARLVAEEG 122
Query: 152 W--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+ A N+ GG+HH + GF D + I+ ++ + RV +D+DAH G+G ++
Sbjct: 123 YDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINL-LLEKGL-RVAYLDIDAHHGDGVQEA 180
Query: 210 FSSDSRVYILDMFNPGIY 227
F RV + + G+Y
Sbjct: 181 FYDTDRVLTISIHESGMY 198
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 165 (63.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/228 (28%), Positives = 97/228 (42%)
Query: 10 TTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLS 69
TTD +T + I + + Y+P+ +S LHP + +
Sbjct: 12 TTDTKTRENTPIYDPNHPGTNNKYNVSYHYNPE--VSRFHYGALHPMKPFRLMLTDHLVI 69
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SPNVSIIIEVPPVALF---PNCLV 125
S +K + P A+K++LL HSE Y+ LQS +P I +A F +C +
Sbjct: 70 SYKLYEKMDLYTPRRATKDELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPI 129
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIH 182
+Y + G L A G AIN GG HH E GFC DI L I
Sbjct: 130 FDG-MYDYSAIYAGASLDATRKLISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSI- 187
Query: 183 YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++++ RVM ID+D H G+G ++ F + RV + +N +P
Sbjct: 188 INLLRVH-PRVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFFP 234
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 165 (63.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/228 (28%), Positives = 97/228 (42%)
Query: 10 TTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLS 69
TTD +T + I + + Y+P+ +S LHP + +
Sbjct: 12 TTDTKTRENTPIYDPNHPGTNNKYNVSYHYNPE--VSRFHYGALHPMKPFRLMLTDHLVI 69
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SPNVSIIIEVPPVALF---PNCLV 125
S +K + P A+K++LL HSE Y+ LQS +P I +A F +C +
Sbjct: 70 SYKLYEKMDLYTPRRATKDELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPI 129
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIH 182
+Y + G L A G AIN GG HH E GFC DI L I
Sbjct: 130 FDG-MYDYSAIYAGASLDATRKLISGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSI- 187
Query: 183 YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++++ RVM ID+D H G+G ++ F + RV + +N +P
Sbjct: 188 INLLRVH-PRVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFFP 234
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 166 (63.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 60/200 (30%), Positives = 92/200 (46%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ + HP + + + G K I P +A E++
Sbjct: 7 KKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTKY 66
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAK 148
HS+ Y+K L++ P N+S ++ + +C V LY F + GG++ A KL K
Sbjct: 67 HSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDG-LYEFCQLSSGGSVAGAVKLNK 125
Query: 149 ER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
++ AIN GG HH E GFC DI L I ++ + RV+ ID+D H G+G E
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIHHGDGVE 183
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 184 EAFYTTDRVMTVSFHKYGEY 203
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 164 (62.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/166 (31%), Positives = 83/166 (50%)
Query: 68 LSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCL 124
L + G K I P +A+ E++ HS+ Y+K L+S P N+S ++ + +C
Sbjct: 13 LLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCP 72
Query: 125 VQRKVLYPF-RKQVGGTILAA-KLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCI 181
V L+ F + GG++ A KL +++ A+N GG HH E GFC DI L I
Sbjct: 73 VFDG-LFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI 131
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
++ + RV+ ID+D H G+G E+ F + RV + G Y
Sbjct: 132 -LELLKYH-QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEY 175
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 164 (62.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/166 (31%), Positives = 83/166 (50%)
Query: 68 LSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCL 124
L + G K I P +A+ E++ HS+ Y+K L+S P N+S ++ + +C
Sbjct: 13 LLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCP 72
Query: 125 VQRKVLYPF-RKQVGGTILAA-KLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCI 181
V L+ F + GG++ A KL +++ A+N GG HH E GFC DI L I
Sbjct: 73 VFDG-LFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI 131
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
++ + RV+ ID+D H G+G E+ F + RV + G Y
Sbjct: 132 -LELLKYH-QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEY 175
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 164 (62.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 55/195 (28%), Positives = 91/195 (46%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D+ + G + HP + + + G K ++ P AS ++ HS+ Y
Sbjct: 14 YDGDFGNFYYG--QGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITRYHSDDY 71
Query: 99 LKSLQS--SPNVSIIIE-VPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKERGW- 152
+ L++ S N+S + + ++ +C V +Y F + GG++ AA +L ++
Sbjct: 72 INFLRNVKSDNMSTFTDQMARFSVGEDCPVFDG-MYEFCQLSCGGSLAAAARLNRQESEI 130
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI L I ++ + RV+ ID+D H G+G E+ F +
Sbjct: 131 AINWMGGLHHAKKSEASGFCYSNDIVLAI-LELLKHH-KRVLYIDIDVHHGDGVEEAFYT 188
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 189 TDRVMTVSFHKHGEY 203
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 129 (50.5 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 143 AAKLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
A KL K++ A+N GG HH E GFC DI L I ++ + RV+ ID+D H
Sbjct: 96 AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYH-QRVLYIDIDIH 153
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIY 227
G+G E+ F + RV + G Y
Sbjct: 154 HGDGVEEAFYTTDRVMTVSFHKYGEY 179
Score = 60 (26.2 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 13 YYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDY 72
Query: 99 LKSLQS 104
+K L+S
Sbjct: 73 IKFLRS 78
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 161 (61.7 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 56/184 (30%), Positives = 85/184 (46%)
Query: 55 PFDSSKWGRIC---QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVS 109
P+ K R+C + + G K + + A ED+L HSE Y+ L+ +P N++
Sbjct: 30 PYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLKFHSEDYVDFLERVTPENIN 89
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRK-QVGGTILAAKLAKERGW--AINVGGGFHHCSAD 166
+V + +C V LY + GG+I A R + AIN GG HH D
Sbjct: 90 EWKDVKRFHIGEDCPVFPG-LYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKD 148
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNP 224
E GFC DI L I ++ + +RV+ ID+D H G+G ++ F RV + F
Sbjct: 149 EASGFCYVNDIVLAI-LELLKFH-ARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGG 206
Query: 225 GIYP 228
+P
Sbjct: 207 DFFP 210
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 143 (55.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 38/102 (37%), Positives = 58/102 (56%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I LA+K+A + G+A+ G HH GFC + +++ Y QLN
Sbjct: 180 RMAVGCVIELASKVASGELKNGFAVVRPPG-HHAEESAAMGFCFFNSVAITAKYLRDQLN 238
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSD-SRVYI-LDMFNPG-IYP 228
IS+++I+DLD H GNG ++ F +D S +YI L ++ G +P
Sbjct: 239 ISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP 280
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G HP + + I L G L+K ++ +AS E++ +VHSE + +SP
Sbjct: 77 GNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSP 134
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 140 (54.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/181 (28%), Positives = 84/181 (46%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKL 146
+ H+++YL+ LQ S + L +C + + + +GG TI AA+
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 147 AKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ G AIN GG+HH DE GFC D L I ++ R++ +DLD H G
Sbjct: 126 LID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHG 182
Query: 204 N 204
+
Sbjct: 183 D 183
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 157 (60.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 55/200 (27%), Positives = 83/200 (41%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K+ Y P+ + G + HP + L+ G L +++P A DL
Sbjct: 18 KVCYFYDPEVGNYYYG--QGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75
Query: 94 HSESYLKSLQS-SPNVSI--IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H++ Y+ L+S +P I ++ + +C V LY F + G + +
Sbjct: 76 HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDG-LYSFCQTYAGGSVGGSVKLNH 134
Query: 151 GW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G AIN GG HH E GFC DI L I Q RV+ +D+D H G+G E
Sbjct: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVE 192
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ F + RV + G Y
Sbjct: 193 EAFYATDRVMTVSFHKFGDY 212
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 156 (60.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 53/157 (33%), Positives = 80/157 (50%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSS-P-NV-SIIIEVPPVALFPNCLVQRKVLYPF-R 134
I P AS ED+ HS+ Y+ L+S+ P N+ S ++ + +C + LY F +
Sbjct: 57 IFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDG-LYEFCQ 115
Query: 135 KQVGGTILAA-KLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
GG++ AA KL K++ AIN GG HH E GFC DI L I ++ + R
Sbjct: 116 LSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGI-LELLKYH-KR 173
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-IYP 228
V+ +D+D H G+G E+ F + RV + G +P
Sbjct: 174 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFP 210
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 156 (60.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 53/157 (33%), Positives = 80/157 (50%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSS-P-NV-SIIIEVPPVALFPNCLVQRKVLYPF-R 134
I P AS ED+ HS+ Y+ L+S+ P N+ S ++ + +C + LY F +
Sbjct: 57 IFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDG-LYEFCQ 115
Query: 135 KQVGGTILAA-KLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
GG++ AA KL K++ AIN GG HH E GFC DI L I ++ + R
Sbjct: 116 LSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGI-LELLKYH-KR 173
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-IYP 228
V+ +D+D H G+G E+ F + RV + G +P
Sbjct: 174 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFP 210
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ E++L VHSE +LK +QS+ ++S + + V + GGTI A
Sbjct: 186 EATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEA 245
Query: 144 AKLAKE----RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL--NISRVMIID 197
K E AI G HH + GFC ++++++ ++ R++I+D
Sbjct: 246 CKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVD 304
Query: 198 LDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
D H GNG +K F +D RV YI L F G YP
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYP 338
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ E++L VHSE +LK +QS+ ++S + + V + GGTI A
Sbjct: 186 EATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEA 245
Query: 144 AKLAKE----RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL--NISRVMIID 197
K E AI G HH + GFC ++++++ ++ R++I+D
Sbjct: 246 CKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVD 304
Query: 198 LDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
D H GNG +K F +D RV YI L F G YP
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYP 338
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 145 (56.1 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 43/174 (24%), Positives = 80/174 (45%)
Query: 74 LDKNCIVEPL-EASKEDLLVVHSESYLKSLQSSPNVS------IIIEVPPVALFPNCLVQ 126
L + C+ P E S+E++L+VHS +L++ +S+ ++ I PN
Sbjct: 45 LVERCVPVPAREGSEEEILLVHSSEHLEAAKSTQTMNEEELKRISGNYDSFFFHPNTYHC 104
Query: 127 RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186
++ Q+ ++++ K+ G A+ G HH + GFC + ++++ YA +
Sbjct: 105 ARLAVGAALQLVDSVMSGKVCN--GMALVRPPG-HHSQRNAANGFCLFNNVAIAAEYAKL 161
Query: 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRV-------YILDMFNPGIYPRDYEA 233
+ + R++I+D D H G G + F D V Y F P + DY+A
Sbjct: 162 KYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDA 215
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 133 (51.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ G+A+ G HH GFC + +++ Y QLNIS+++I+DLD H GNG ++
Sbjct: 2 QNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQ 60
Query: 209 DFSSD-SRVYI-LDMFNPG-IYP 228
F +D S +YI L ++ G +P
Sbjct: 61 AFYADPSILYISLHRYDEGNFFP 83
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 153 (58.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/180 (30%), Positives = 84/180 (46%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NV-SI 110
HP + + + G K I P +AS+ +L HS+ Y+ L+ +P N+
Sbjct: 23 HPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTNFHSDDYINFLKLVTPDNMHDY 82
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRK-QVGGTI-LAAKL-AKERGWAINVGGGFHHCSADE 167
++ + +C V +Y F + GG+I A K+ +KE AIN GG HH E
Sbjct: 83 SKQLVKFNVREDCPVFDG-MYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSE 141
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC DI L I ++ + RV+ ID+D H G+G E+ F + RV + G Y
Sbjct: 142 ASGFCYTNDIVLSI-LELLKHH-ERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGDY 199
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 68 LSSEGFLDKNCIVEPL-EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQ 126
L + G L + C P+ +A+++++L+ HSE YL++++ +P +++ E+ + N +
Sbjct: 93 LRTHG-LAQRCKAVPVRQATEQEILLAHSEEYLEAVKQTPGMNVE-ELMAFSKKYNDVYF 150
Query: 127 RKVLYPFRKQVGGTILA---AKLAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
+ +Y K G L + + +E G A+ G HH GFC + ++++
Sbjct: 151 HQNIYHCAKLAAGATLQLVDSVMKREVRNGMALVRPPG-HHSQRSAANGFCVFNNVAIAA 209
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
YA N++R++I+D D H G G + F D V
Sbjct: 210 LYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSV 244
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 151 (58.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 54/201 (26%), Positives = 87/201 (43%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ HP + + + + +K ++ P+ A++ D+
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 94 HSESYLKSL-QSSPNVSIIIEVPPVALF---PNCLVQRKVLYPFRK-QVGGTILAAKLAK 148
H++ Y++ L + +P+ + P F +C V LY F GG+I AA+
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQ-PHQLKFNVGDDCPVFDG-LYEFCSISAGGSIGAAQELN 122
Query: 149 ERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
AIN GG HH E GFC DI+L ++ + RV+ ID+D H G+G
Sbjct: 123 SGNAEIAINWAGGLHHAKKREASGFCYVNDIALAA-LELLKYH-QRVLYIDIDVHHGDGV 180
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
E+ F + RV G Y
Sbjct: 181 EEFFYTTDRVMTCSFHKFGEY 201
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 143 (55.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 38/102 (37%), Positives = 58/102 (56%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I LA+K+A + G+A+ G HH GFC + +++ Y QLN
Sbjct: 752 RMAVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLN 810
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSD-SRVYI-LDMFNPG-IYP 228
IS+++I+DLD H GNG ++ F +D S +YI L ++ G +P
Sbjct: 811 ISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP 852
Score = 55 (24.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
G HP + + I L G L+K ++ +AS E++ +VHSE +
Sbjct: 649 GNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH 698
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 143 (55.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 38/102 (37%), Positives = 58/102 (56%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I LA+K+A + G+A+ G HH GFC + +++ Y QLN
Sbjct: 754 RMAVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLN 812
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSD-SRVYI-LDMFNPG-IYP 228
IS+++I+DLD H GNG ++ F +D S +YI L ++ G +P
Sbjct: 813 ISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP 854
Score = 55 (24.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
G HP + + I L G L+K ++ +AS E++ +VHSE +
Sbjct: 651 GNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH 700
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 57/195 (29%), Positives = 81/195 (41%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SPN--VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SPN + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPG-LFEFCSRYTGASLQGATQLNHKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVISI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 149 (57.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 85 ASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
A+++DLL VHS +YL+ + S + + PV P ++ +L
Sbjct: 74 ATEDDLLRVHSAAYLQRFKALSDAGGGHLGDEAPVG--PGSYEIAQLSAGLAMAAVDAVL 131
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ + + ++++ G HHC+ D+ GFC A+I++ I A + + +V +ID D H
Sbjct: 132 SGEA--DNAYSLSRPPG-HHCTRDQAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDVHH 188
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
GNG + F + V L + G +P Y
Sbjct: 189 GNGTQSIFEERADVLTLSLHQDGCFPPGY 217
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 149 (57.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 57/195 (29%), Positives = 81/195 (41%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SPN--VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SPN + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 149 (57.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 57/195 (29%), Positives = 81/195 (41%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SPN--VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SPN + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 146 (56.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 52/182 (28%), Positives = 85/182 (46%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI-PKRASM---VHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAKL 146
+ H+++YL+ LQ S + L +C + + + +GG TI AA+
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 147 AKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ G AIN GG+HH DE GFC D L I ++ R++ +DLD H G
Sbjct: 126 LID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHG 182
Query: 204 NG 205
+G
Sbjct: 183 DG 184
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 140 (54.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I LA+++A + G+A+ G HH GFC + +++ Y QLN
Sbjct: 752 RMAVGCVIELASRVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLN 810
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
IS+++I+DLD H GNG ++ F +D + YI L ++ G +P
Sbjct: 811 ISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFP 852
Score = 55 (24.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
G HP + + I L G L+K ++ +AS E++ +VHSE +
Sbjct: 649 GNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH 698
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 149 (57.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 59/215 (27%), Positives = 93/215 (43%)
Query: 31 PIFKLPLIYSPDYDISF--------LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
P+F+ YSP F G++ HP + +SS G + E
Sbjct: 16 PLFEFNSAYSPRVSYHFNSKVSHYHYGVK--HPMKPFRLMLTDHLVSSYGLHKIMDLYET 73
Query: 83 LEASKEDLLVVHSESYLKSLQS-SPNVSIIIEVPPVALF---PNCLVQRKVLYPFRKQVG 138
A++++LL HSE Y+ L SP + + + F +C + + LY +
Sbjct: 74 RSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQN-LYDYTTLYT 132
Query: 139 GTILAA--KLAKERG-WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G L A KL + AIN GG HH + GFC DI L I ++ + R++
Sbjct: 133 GASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSI-LNLLRYH-PRILY 190
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
ID+D H G+G ++ F + RV+ L +N +P
Sbjct: 191 IDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFP 225
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 146 (56.5 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 42/143 (29%), Positives = 61/143 (42%)
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPP----VALFPNCLVQRKVLYPFRKQVGGTILAAK 145
L H+ Y+ +LQ + + E + PN + P GG++LAA+
Sbjct: 53 LRAFHTPDYIAALQQAEAEQAVSEETRARHGLGTLPNPVFAEMYRRP-ATAAGGSLLAAE 111
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
L N GGG HH AD GGFC D L I A +L +RV +D+DAH +G
Sbjct: 112 LVARGHRVFNPGGGTHHGFADRAGGFCYLNDPVLAI-LALQRLGCARVAYVDIDAHHCDG 170
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
F V ++ + +P
Sbjct: 171 VASAFQGSQTVRMISIHEARRWP 193
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + +P +AS+ D+ HSE Y
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDY 66
Query: 99 LKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAKLA-KERGW 152
+ LQ SP N+ + + + +C V L+ F + G L A +L K
Sbjct: 67 IDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 183
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 184 TDRVMTVSFHKYGNY 198
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/191 (26%), Positives = 83/191 (43%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSL 102
D+ +LHP + +C L + K +VE + D+ V H+E Y+ L
Sbjct: 38 DVGHFHYGQLHPMKPQRLV-VCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFL 96
Query: 103 QS-SPNVSIIIEVPPVALF---PNCLVQRKVLYPFRKQVGGTILAAKLA--KERGWAINV 156
Q+ +P + + + + F +C + + GG++ A+ K IN
Sbjct: 97 QTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINW 156
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GG HH E GFC DI L I ++ + RV+ ID+D H G+G ++ F++ RV
Sbjct: 157 PGGLHHAKKSEASGFCYVNDIVLGI-LELLKYH-KRVLYIDIDIHHGDGVQEAFNNSDRV 214
Query: 217 YILDMFNPGIY 227
+ G Y
Sbjct: 215 MTVSFHRFGQY 225
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF---PNCLVQ 126
S G K I P +A+ E++ HS+ Y+K L+ S+ + + F +C V
Sbjct: 32 SYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRFIRPDSMSEYIKQMQRFNVGQDCPVF 91
Query: 127 RKVLYPFRKQVGGTILAA-KLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184
+ + GG++ +A KL K++ A+N G HH E GFC DI L I
Sbjct: 92 NGLSEFCQLSTGGSVASAVKLNKQQTDIAVNWAGDLHHAKNSEASGFCYVNDIVLAILEL 151
Query: 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
L RV+ +D+D H G+G E+ F + V + N
Sbjct: 152 LKYLQ--RVLCMDIDTHHGDGTEEAFYTADWVMTVSFHN 188
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 57/211 (27%), Positives = 89/211 (42%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P K + Y D D+ HP + + + G K I A+K+++
Sbjct: 15 PSDKRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEM 74
Query: 91 LVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAK 145
H++ Y+ L +P N+ + E + +C V LY + GG + AA+
Sbjct: 75 CQFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDG-LYEYCSISGGGSMEGAAR 133
Query: 146 LAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L + + A+N GG HH E GFC DI L I ++ + RV+ ID+D H G+
Sbjct: 134 LNRGKCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGI-IELLRYH-PRVLYIDIDVHHGD 191
Query: 205 GHEKDFSSDSRVYILDMFNPG-IYPRDYEAR 234
G E+ F + RV G +P E R
Sbjct: 192 GVEEAFYTTDRVMTCSFHKYGEFFPGTGELR 222
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/174 (24%), Positives = 80/174 (45%)
Query: 74 LDKNCIVEPL-EASKEDLLVVHSESYLKSLQSSPNVS------IIIEVPPVALFPNCLVQ 126
L + C+ P E S+E++L+VHS +L++ +S+ ++ I PN
Sbjct: 45 LVERCVPVPAREGSEEEILLVHSSEHLEAAKSTQTMNEEELKRISGNYDSFFFHPNTYHC 104
Query: 127 RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186
++ Q+ ++++ K+ G A+ G HH + GFC + ++++ YA +
Sbjct: 105 ARLAVGAALQLVDSVMSGKVCN--GMALVRPPG-HHSQRNAANGFCLFNNVAIAAEYAKL 161
Query: 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRV-------YILDMFNPGIYPRDYEA 233
+ + R++I+D D H G G + F D V Y F P + DY+A
Sbjct: 162 KYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDA 215
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 139 (54.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L EG LD+ + A KE+L++VHS Y+
Sbjct: 101 WDDSFPEGPERLHA--------IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDL 152
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ ++ + V L PN CL VL ++ +L A++
Sbjct: 153 METTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVL-----RLVDAVLGAEI--RN 205
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + +++ YA + I RV+I+D D H G G + F
Sbjct: 206 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 264
Query: 211 SSDSR 215
D R
Sbjct: 265 DQDPR 269
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 54/159 (33%), Positives = 74/159 (46%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQS-SP----NVSIIIEVPPVALFPNCLVQRKVLYPF 133
I P A D+ HS Y+ L S SP + S + + +C V L+ F
Sbjct: 63 ISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDG-LFDF 121
Query: 134 -RKQVGGTILAA-KLAKERG-WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R GG+I AA KL ++ AIN GGG HH E GFC DI L I +++
Sbjct: 122 CRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGI-LELLKM-F 179
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-IYP 228
RV+ ID+D H G+G E+ F + RV + G +P
Sbjct: 180 KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFP 218
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 135 (52.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I LAA++A + G+A+ G HH GFC + I++ Y +LN
Sbjct: 753 RMAVGCVIELAARVASRELKNGFAVVRPPG-HHAEESTAMGFCFFNSIAITAKYLRDKLN 811
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSD-SRVYI-LDMFNPG-IYP 228
I +++I+DLD H GNG ++ F +D S +Y+ L ++ G +P
Sbjct: 812 IGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFP 853
Score = 55 (24.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G L+K + +AS E++ +VHSE + +SP
Sbjct: 655 HPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSLLYGTSP 707
>UNIPROTKB|H3BM24 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
Length = 161
Score = 121 (47.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D DI + HP + L + G K I P +A+ E++ HS+ Y
Sbjct: 4 YYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEY 63
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAA-KLAKER-GW 152
+K L+S P N+S ++ + +C V L+ F + GG++ A KL +++
Sbjct: 64 IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG-LFEFCQLSTGGSVAGAVKLNRQQTDM 122
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCI 181
A+N GG HH E GFC DI L I
Sbjct: 123 AVNWAGGLHHAKKSEASGFCYVNDIVLAI 151
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 140 (54.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K+ Y D + G HP + + + G K + P +A ++
Sbjct: 6 KISYFYDGDVGSVYFGPN--HPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 94 HSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPF-RKQVGGTILAAKLAKE 149
HS Y++ LQ +P N ++ E+ L +C V L+ F + GGTI AA+
Sbjct: 64 HSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFED-LFEFCQLYAGGTIDAARRLNN 122
Query: 150 R--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ AIN GG HH + GFC D+ L I ++ + RV+ ID+D H G+G E
Sbjct: 123 KLCDIAINWAGGLHHAKKCDASGFCYINDLVLGI-LELLKHH-PRVLYIDIDVHHGDGVE 180
Query: 208 KDFSSDSRVYIL------DMFNPG 225
+ F RV + D F PG
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPG 204
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 50/219 (22%), Positives = 94/219 (42%)
Query: 18 RNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN 77
R ++L ++ +P FK+ Y + + HP S+ I + G L +
Sbjct: 527 RLQVLRAETKLSVPSFKVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQM 586
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
+ P A+ +++ + H+ +++ +++ E+ A N + +
Sbjct: 587 KQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPK-ELHDAAGIYNSVYLHPRTFDCATLA 645
Query: 138 GGTILAAKLAKERGWA----INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
G +L A + RG + NV HH D GFC + ++++ YA + RV
Sbjct: 646 AGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERV 705
Query: 194 MIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYPR 229
+I+D D H GNG + F S+ +V YI L + G +P+
Sbjct: 706 LIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPK 744
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 74 LDKNCIVEPLE-ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL-FPNCLVQRKVLY 131
L + C+ P A+K+++L +H+E + + L+ + + + ++ + + +
Sbjct: 154 LTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFE 213
Query: 132 PFRKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ 187
G TI L L + G AI G HH E G+C + +++L +A
Sbjct: 214 LSLLASGSTIELVDHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDV 272
Query: 188 LNISRVMIIDLDAHQGNGHEKDFSSDSRV--YILDMFNPG-IYPRDYEA 233
+ R++IID D H G G ++ F +D RV + + F G +P +E+
Sbjct: 273 HKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHES 321
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 137 (53.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L EG LD+ + A KE+L++VHS Y+
Sbjct: 46 WDDSFPEGPERLHA--------IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDL 97
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ ++ + V L PN CL VL ++ +L A++
Sbjct: 98 METTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVL-----RLVDAVLGAEI--RN 150
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + +++ YA + I RV+I+D D H G G + F
Sbjct: 151 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 209
Query: 211 SSDSRV 216
D V
Sbjct: 210 DQDPSV 215
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 140 (54.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 57/211 (27%), Positives = 89/211 (42%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P K + Y D DI HP + + + G K I A+K+++
Sbjct: 14 PNQKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEM 73
Query: 91 LVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAK 145
H++ Y+ + +P N+ + E + +C V L+ + GG + AA+
Sbjct: 74 CQFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDG-LFEYCGISGGGSMEGAAR 132
Query: 146 LAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L + + AIN GG HH E GFC DI L I ++ + RV+ ID+D H G+
Sbjct: 133 LNRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGI-IELLRYH-PRVLYIDIDVHHGD 190
Query: 205 GHEKDFSSDSRVYILDMFNPG-IYPRDYEAR 234
G E+ F + RV G +P E R
Sbjct: 191 GVEEAFYTTDRVMTCSFHKYGEFFPGTGELR 221
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 140 (54.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 57/211 (27%), Positives = 89/211 (42%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P K + Y D DI HP + + + G K I A+K+++
Sbjct: 14 PNQKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEM 73
Query: 91 LVVHSESYLKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPFRKQVGGTIL--AAK 145
H++ Y+ + +P N+ + E + +C V L+ + GG + AA+
Sbjct: 74 CQFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDG-LFEYCGISGGGSMEGAAR 132
Query: 146 LAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L + + AIN GG HH E GFC DI L I ++ + RV+ ID+D H G+
Sbjct: 133 LNRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGI-IELLRYH-PRVLYIDIDVHHGD 190
Query: 205 GHEKDFSSDSRVYILDMFNPG-IYPRDYEAR 234
G E+ F + RV G +P E R
Sbjct: 191 GVEEAFYTTDRVMTCSFHKYGEFFPGTGELR 221
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 138 (53.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 54/184 (29%), Positives = 77/184 (41%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVSI- 110
HP + + + G K I P +AS +D+L HS+ Y+ LQ +P N+
Sbjct: 23 HPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAYLQQVTPQNIQCN 82
Query: 111 -IIEVPPVALFP---NCLVQRKVLYPFRKQVGGTIL--AAKLAKERG-WAINVGGGFHHC 163
+ +A F +C V L+ F G L A KL IN GG HH
Sbjct: 83 SVAYTKYLAHFSVGEDCPVFDG-LFDFCAMYTGASLEGAQKLNHNHSDICINWSGGLHHA 141
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
E GFC DI + I ++ + RV+ ID+D H G+G ++ F RV
Sbjct: 142 KKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHK 199
Query: 224 PGIY 227
G Y
Sbjct: 200 YGNY 203
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 142 (55.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 53/186 (28%), Positives = 86/186 (46%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L EG LD+ + A KE+L++VHS Y+
Sbjct: 111 WDDSFPEGPERLHA--------IKEQLMQEGLLDRCVSFQARFAEKEELMLVHSLEYIDL 162
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ ++ + V L PN CL VL ++ +L A++
Sbjct: 163 METTQYMNEGELRVLADTYDSVYLHPNSYTCACLASGSVL-----RLVDAVLGAEI--RN 215
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + ++L YA + ++ RV+I+D D H G G + F
Sbjct: 216 GMAIIRPPG-HHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTF 274
Query: 211 SSDSRV 216
D V
Sbjct: 275 DQDPSV 280
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 54/199 (27%), Positives = 93/199 (46%)
Query: 53 LHPFDSSKWGRICQFLSSEGFLD-----KNCIVEPLE------ASKEDLLVVHSESYLKS 101
+HP D + I + L G +D + + PL+ A++E++ +VH+ ++
Sbjct: 145 VHPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHARNATEEEISLVHTAAHYAF 204
Query: 102 LQSSPNVS----IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI---LAAKLAKERGWAI 154
++S+ ++S I +E +++ N L L VGG I LA K +
Sbjct: 205 VESTKDMSDEELIALEHTRDSIYFNNLTFASSLL----SVGGAIETCLAVATRKVKNAIA 260
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS--RVMIIDLDAHQGNGHEKDFSS 212
+ HH D+ GFC + ++S+ +L +S ++MI+D D H GNG +K F
Sbjct: 261 VIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYD 320
Query: 213 DSRV-YI-LDMFNPG-IYP 228
D V YI L ++ G YP
Sbjct: 321 DPNVLYISLHVYQNGSFYP 339
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 132 (51.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 36/103 (34%), Positives = 52/103 (50%)
Query: 130 LYPF-RKQVGGTI---LAAKLAKER-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184
L+ F + GG++ A KL K++ A+N GG HH E GFC DI L I
Sbjct: 14 LFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LE 72
Query: 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
++ + RV+ ID+D H G+G E+ F + RV + G Y
Sbjct: 73 LLKYH-QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEY 114
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
A+ E++L VH++ +L+ ++S+ +S + + R GG I A
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 145 KLAKERGWAIN----VGGGFHHCSADEGGGFCAYADISLCIHYAFVQL--NISRVMIIDL 198
K E G N V HH GGFC ++++++ ++ R+MI+D
Sbjct: 186 KAVVE-GRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDW 244
Query: 199 DAHQGNGHEKDFSSDSRV-YI-LDMFNPGIY 227
D H GNG +K F D +V Y+ L F G Y
Sbjct: 245 DIHHGNGTQKSFYQDDQVLYVSLHRFEMGKY 275
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L EG LD+ + A KE+L++VHS Y+
Sbjct: 101 WDDSFPEGPERLHA--------IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDL 152
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ ++ + V L PN CL VL ++ +L A++
Sbjct: 153 METTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVL-----RLVDAVLGAEI--RN 205
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + +++ YA + I RV+I+D D H G G + F
Sbjct: 206 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 264
Query: 211 SSDSRV 216
D V
Sbjct: 265 DQDPSV 270
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L EG LD+ + A KE+L++VHS Y+
Sbjct: 115 WDDSFPEGPERLHA--------IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDL 166
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ ++ + V L PN CL VL ++ +L A++
Sbjct: 167 METTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVL-----RLVDAVLGAEI--RN 219
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + +++ YA + I RV+I+D D H G G + F
Sbjct: 220 GMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTF 278
Query: 211 SSDSRV 216
D V
Sbjct: 279 DQDPSV 284
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 55/203 (27%), Positives = 84/203 (41%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D D+ HP + + + K I ASK ++ H++ Y
Sbjct: 30 YFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMTQFHTDEY 89
Query: 99 LKSLQS-SP-NVSIII-EVPPVALFPNCLVQRKVLYPFRK-QVGGTIL-AAKLAKER-GW 152
+ L +P N+ E + +C V L+ F GG++ AA+L + +
Sbjct: 90 IDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDG-LFEFCGISAGGSMEGAARLNRNKCDI 148
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH E GFC DI L I ++ RV+ +D+D H G+G E+ F +
Sbjct: 149 AVNWAGGLHHAKKSEASGFCYVNDIVLGI-LELLRFK-QRVLYVDIDVHHGDGVEEAFYT 206
Query: 213 DSRVYILDMFNPGIY-PRDYEAR 234
RV + G Y P E R
Sbjct: 207 TDRVMTVSFHKYGEYFPGTGELR 229
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 131 (51.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/165 (29%), Positives = 72/165 (43%)
Query: 72 GFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SP-NVSIIIE-VPPVALFPNCLVQRK 128
G +K + P A+ ++ H E YL L+ +P N + + +C V
Sbjct: 63 GLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDG 122
Query: 129 VLYPFRKQVGGTILAA--KLAK-ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
Y F ++ G L A KL + + AIN GG HH E GFC DI L I
Sbjct: 123 T-YEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAI-LNM 180
Query: 186 VQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ RV+ ID+D H G+G ++ F RV + +N +P
Sbjct: 181 LRF-FPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFP 224
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 40/102 (39%), Positives = 51/102 (50%)
Query: 138 GGTILAA-KLAKERG-WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G ++ AA KL + AIN GG HH E GFC DI L I ++++ RVM
Sbjct: 149 GASLDAARKLCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAI-LQLLRIH-PRVMY 206
Query: 196 IDLDAHQGNGHEKDFSSDSRV-------YILDMFNPGIYPRD 230
ID+D H G+G E+ F S RV Y + F PG P D
Sbjct: 207 IDIDVHHGDGVEQAFWSTDRVLTVSFHKYDKENFFPGTGPLD 248
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 135 (52.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 68 LSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS-----IIIEV-PPVALFP 121
L EG LD+ + A KE+L++VHS Y+ ++++ ++ ++ + V L P
Sbjct: 119 LIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHP 178
Query: 122 N-----CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
N CL VL ++ +L A++ G AI G HH G+C +
Sbjct: 179 NSYTCACLASGSVL-----RLVDAVLEAEI--RNGMAIIRPPG-HHAQHSLMDGYCMFNH 230
Query: 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+++ YA + +I RV+I+D D H G G + F D V
Sbjct: 231 VAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSV 270
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 43 YDISFL-GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
+D SF G E+LH I + L +G LD+ + A KE+L++VHS Y+
Sbjct: 115 WDDSFPEGPERLHA--------IKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEYIDL 166
Query: 102 LQSSPNVS-----IIIEV-PPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKER 150
++++ ++ I+ + V L PN CL VL ++ +L ++
Sbjct: 167 METTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVL-----RLVDAVLRNEI--RN 219
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G AI G HH G+C + +++ YA + NI RV+I+D D H G G + F
Sbjct: 220 GMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTF 278
Query: 211 SSDSRV 216
D V
Sbjct: 279 DQDPSV 284
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 52/213 (24%), Positives = 92/213 (43%)
Query: 30 IPIFKLPLIYSPD---YDISFLGIEKL----HPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+P+ P++ + YD + +G L HP + RI + L G + C+ P
Sbjct: 482 LPVLTWPMLQARTGLVYDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGR-CLTLP 540
Query: 83 LE-ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT- 140
A+ +LL HS Y+ L+++ + + F + + + G
Sbjct: 541 TRPATDAELLTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVC 600
Query: 141 -ILAAKLAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYA-FVQLNISRVMII 196
++ A LA+E G A+ G HH D GFC + +++ +A + + R++I+
Sbjct: 601 RLVEAVLAREVLNGTAVVRPPG-HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIV 659
Query: 197 DLDAHQGNGHEKDFSSDSRV-YI-LDMFNPGIY 227
D D H GNG + F D V YI L ++ G +
Sbjct: 660 DWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTF 692
>UNIPROTKB|C9J8F0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
Bgee:C9J8F0 Uniprot:C9J8F0
Length = 132
Score = 108 (43.1 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 17 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 75
Query: 137 VGG-TILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCI 181
+GG TI AA+ + G AIN GG+HH DE GFC D L I
Sbjct: 76 IGGATITAAQCLID-GMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI 123
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 48 LGIEKLHPFDSSKWGRICQFL-SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-- 104
L ++ F++ + R Q L + G + + P A+ E + +VH +S++ L S
Sbjct: 36 LTVQPAEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVC 95
Query: 105 SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGF 160
E+ P P L ++ R VGG I+A A E + + G
Sbjct: 96 ERGGGDAGELTPAG--PASL---EIA---RLAVGGVIVAMDAVMTGAAENAYVLCRPPG- 146
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH D GFC A+ +L I + ++R+ ++D D H GNG E F D V +
Sbjct: 147 HHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTIS 206
Query: 221 MFNPGIYPRD 230
+ ++P D
Sbjct: 207 LHQDNLFPLD 216
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 48 LGIEKLHPFDSSKWGRICQFL-SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-- 104
L ++ F++ + R Q L + G + + P A+ E + +VH +S++ L S
Sbjct: 36 LTVQPAEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVC 95
Query: 105 SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGF 160
E+ P P L ++ R VGG I+A A E + + G
Sbjct: 96 ERGGGDAGELTPAG--PASL---EIA---RLAVGGVIVAMDAVMTGAAENAYVLCRPPG- 146
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH D GFC A+ +L I + ++R+ ++D D H GNG E F D V +
Sbjct: 147 HHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTIS 206
Query: 221 MFNPGIYPRD 230
+ ++P D
Sbjct: 207 LHQDNLFPLD 216
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 130 (50.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI-- 141
EA + ++L VH++ Y+ ++S+ +++ + + + V + + G +I
Sbjct: 58 EAEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKYEDIYVNSATWHRAKLAAGASIDL 117
Query: 142 -LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDA 200
+ AK G A G HH DEG GFC + ++++ A +Q N +V+I+D D
Sbjct: 118 MTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAA-IQ-NGQKVLIVDYDV 174
Query: 201 HQGNGHEK 208
H GNG ++
Sbjct: 175 HAGNGTQE 182
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
ER IN GG HH GFC D+ L I + ++++ +D D H G+G EK
Sbjct: 198 ERLIGINWDGGRHHAFKQRASGFCYINDVVLLIQ-RLRKAKLNKITYVDFDLHHGDGVEK 256
Query: 209 DFSSDSRVYILD--MFNPGIYP 228
F ++ + ++ PG +P
Sbjct: 257 AFQYSKQIQTISVHLYEPGFFP 278
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 85 ASKEDLLVVHSESYLKSL 102
A K+DLL HS+SY+ L
Sbjct: 52 ARKDDLLEFHSKSYIDYL 69
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/188 (25%), Positives = 82/188 (43%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP-N 107
G +HP + + I L G + + +A+ E+L VHSE+++ ++P
Sbjct: 615 GNSNIHPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLR 674
Query: 108 VSIIIEVPPVALFPNCL---VQRKVLY-------PFRKQVGGTI-LAAKLAK---ERGWA 153
+ V P+ + C V ++ R VG + L K+A G+A
Sbjct: 675 QKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFA 734
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+ G HH GFC + +++ +LN+S+++I+D D H GNG ++ F SD
Sbjct: 735 VVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSD 793
Query: 214 SRVYILDM 221
V L +
Sbjct: 794 PNVLYLSL 801
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
K K++ A+N GG HHC GFC D+ L I+ ++ N+ V +DLD H G+
Sbjct: 185 KETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSIN--ILRKNLGSVFYLDLDLHHGD 242
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYP 228
G E F +V + ++ G YP
Sbjct: 243 GVENAFKFSKKVATCSIHRYDIGFYP 268
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
K K++ A+N GG HHC GFC D+ L I+ ++ N+ V +DLD H G+
Sbjct: 185 KETKDQIIAVNWYGGRHHCHKSHAAGFCYVNDVVLSIN--ILRKNLGSVFYLDLDLHHGD 242
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYP 228
G E F +V + ++ G YP
Sbjct: 243 GVENAFKFSKKVATCSIHRYDIGFYP 268
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 142 LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ---LNISRVMI 195
+A K+A+ + G+AI G HH +DE GFC + ++++ + + L++ +++I
Sbjct: 169 VAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILI 227
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDM 221
+D D H GNG +K F DSRV I +
Sbjct: 228 VDWDIHHGNGTQKMFWKDSRVLIFSV 253
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/150 (24%), Positives = 69/150 (46%)
Query: 74 LDKNCI-VEPLEASKEDLLVVHSESYLKSLQSSPNV------SIIIEVPPVALFPNCLVQ 126
L++ C+ + EAS+E+L +VHS Y+ +Q + + ++ + V P+
Sbjct: 43 LEERCLCLSACEASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNAVYFHPDTFHC 102
Query: 127 RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186
++ Q+ +L A G A+ G HH GFC + +++L +A
Sbjct: 103 ARLAAGAALQLVDAVLTG--AVHNGLALVRPPG-HHSQRAAANGFCVFNNVALAAKHAKQ 159
Query: 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ + R++I+D D H G G + F+ D V
Sbjct: 160 KYGLQRILIVDWDVHHGQGIQYIFNDDPSV 189
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 71 EGFLDKNCI-VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA-LFPNCLVQRK 128
+G L++ C+ + P EAS+ +L +VHS Y+ L+ + + E+ ++ +
Sbjct: 40 QGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQALDTQ-ELRALSGQYDAVYFHPS 98
Query: 129 VLYPFRKQVGGTI--LAAKL--AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184
+ R VG + + A L A G A+ G HH GFC + ++++ +A
Sbjct: 99 TFHCARLAVGAALQLVDAVLMGAVHNGLALVRPPG-HHSQRAAANGFCVFNNVAIAARHA 157
Query: 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ + R++I+D D H G G + F D V
Sbjct: 158 QQKHGLQRILIVDWDVHHGQGIQYIFEDDPSV 189
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 120 (47.3 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 85 ASKEDLLVVHSESYL---KSLQSSPNVSIIIEVP--PVALFPNCLVQRKVLYPFRKQVGG 139
A+ ED+L VH SY+ + L S + + P P A F ++ ++ V G
Sbjct: 69 ATIEDVLRVHPRSYIDEFRRLSDSGGGELGLRTPFGPGA-FEIAMLSAGLVID---AVEG 124
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD 199
+ +A++ G HHC D GFC A+I++ I A + + +V ++D D
Sbjct: 125 VVQGRY---RNAYALSRPPG-HHCLPDWPNGFCLLANIAIAIEAAKAKGLLGKVAVLDWD 180
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
H GNG E + V + + YP D
Sbjct: 181 VHHGNGTEAIYYERDDVLTISIHQDRCYPHD 211
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 115 (45.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 342 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKLN 400
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 401 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 442
Score = 49 (22.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 239 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 296
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 120 (47.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 39/153 (25%), Positives = 67/153 (43%)
Query: 85 ASKEDLLVVHSESYLKSLQ-----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--V 137
A+ ED+ VH ++Y+ L+ +S + I IE + Q ++ V
Sbjct: 117 ATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALV 176
Query: 138 GGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
I A++ + + G+A+ G HH GFC + ++++ +A + R+ I
Sbjct: 177 DSVIAASRNSVDPPIGFALIRPPG-HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFI 235
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
ID D H GNG F+ D ++ L G YP
Sbjct: 236 IDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSYP 268
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 106 (42.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH + G+C + +L + A + SRV +ID+D H GNG + F + +V +
Sbjct: 144 HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVS 203
Query: 221 M-FNPGIYPRDYEARRFIDQKVEVV 244
+ N G + + + ID+ E V
Sbjct: 204 LHMNHGSWGSSHPQKGSIDELGEDV 228
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/65 (21%), Positives = 27/65 (41%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
++ YD FL + + HP ++ + + L L A +LL+ H+
Sbjct: 23 VFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSE 82
Query: 98 YLKSL 102
Y++ L
Sbjct: 83 YIEKL 87
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 138 GGTIL-AAKLAK-ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
GG++ AA+L + + AIN GG HH E GFC DI L I ++ + RV+
Sbjct: 123 GGSMEGAARLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGI-IELLRYH-PRVLY 180
Query: 196 IDLDAHQGNGHEKDFSSDSRV 216
ID D H G+G E+ F ++ RV
Sbjct: 181 IDTDVHHGDGVEEAFYTNDRV 201
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 138 GGTIL-AAKLAK-ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
GG++ AA+L + + AIN GG HH E GFC DI L I ++ + RV+
Sbjct: 123 GGSMEGAARLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGI-IELLRYH-PRVLY 180
Query: 196 IDLDAHQGNGHEKDFSSDSRV 216
ID D H G+G E+ F ++ RV
Sbjct: 181 IDTDVHHGDGVEEAFYTNDRV 201
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 71 EGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS-----IIIEV-PPVALFPN-- 122
EG L + + A KE+L++VHS Y+ ++++ ++ ++ E V L PN
Sbjct: 121 EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSY 180
Query: 123 ---CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISL 179
CL VL ++ ++ A++ G A+ G HH + G+C + +++
Sbjct: 181 SCACLATGSVL-----RLVDALMGAEI--RNGMAVIRPPG-HHAQHNLMDGYCMFNHLAV 232
Query: 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
YA + I RV+I+D D H G G + F D V
Sbjct: 233 AARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSV 269
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLE-ASKEDLLVVHSESYLKSLQSSPNVSIII 112
HP + RI L G L C++ P A +LL HS Y++ L+++ +
Sbjct: 499 HPETPQRILRIMCHLEEVG-LAARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRD 557
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGT--ILAAKLAKE--RGWAINVGGGFHHCSADEG 168
A F + + + G ++ A L+ E G A+ G HH +
Sbjct: 558 LHREGANFDSIYICPSTFACAKLATGAACRLVEAVLSGEVLNGIAVVRPPG-HHAEPNAA 616
Query: 169 GGFCAYADISLCIHYA-FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG 225
GFC + +++ +A + R++I+D D H GNG + F D V Y+ L ++ G
Sbjct: 617 CGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRG 676
Query: 226 IY 227
+
Sbjct: 677 TF 678
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 122 (48.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD--M 221
S GFC + + YA ++ N+ ++ IID D H GNG E+ S+D Y L M
Sbjct: 1240 SGTSSQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHM 1299
Query: 222 FNPGIYP 228
F G YP
Sbjct: 1300 FEEGFYP 1306
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
S+ + KN +P E + + +L VHS YL+ L+
Sbjct: 1099 SDRLIIKN---DPEEINDKWILTVHSPEYLRLLE 1129
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 48/182 (26%), Positives = 78/182 (42%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLE-ASKEDLLVVHSESYLKSLQSSPNVSIII 112
HP + RI L G L C++ P A +LL HS Y++ L+++ +
Sbjct: 502 HPETPQRILRIMCHLEEVG-LAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRD 560
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGT--ILAAKLAKE--RGWAINVGGGFHHCSADEG 168
A F + + + G ++ A L+ E G AI G HH D
Sbjct: 561 LHREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HHAEPDAA 619
Query: 169 GGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG 225
GFC + +++ +A V + R++I+D D H GNG + F D V Y+ L ++ G
Sbjct: 620 CGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRG 679
Query: 226 IY 227
+
Sbjct: 680 TF 681
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 43/173 (24%), Positives = 76/173 (43%)
Query: 55 PFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS----- 109
P + + I + L EG L + + A KE+L++VHS Y+ ++++ ++
Sbjct: 105 PENPERLHAIKEQLILEGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELR 164
Query: 110 -IIIEVPPVALFPN-----CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ V L PN CL VL ++ ++ A++ G A+ G HH
Sbjct: 165 VLAGTYDSVYLHPNSYSCACLATGSVL-----RLVDAVMGAEI--RNGMAVIRPPG-HHA 216
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
G+C + +++ YA + I R++I+D D H G G + F D V
Sbjct: 217 QRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPSV 269
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 770 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKLN 828
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 829 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 870
Score = 49 (22.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 667 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 724
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 115 (45.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 797 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKLN 855
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 856 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 897
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 694 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 751
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 115 (45.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 805 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKLN 863
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 864 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 905
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 702 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 759
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 116 (45.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I L K+A + G+A+ G HH GFC + +++ +LN
Sbjct: 742 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 800
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+++I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 801 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP 842
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 644 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 696
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I L K+A + G+A+ G HH GFC + +++ +LN
Sbjct: 750 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 808
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+++I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 809 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP 850
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 649 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 701
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I L K+A + G+A+ G HH GFC + +++ +LN
Sbjct: 759 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 817
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+++I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 818 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP 859
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 665 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 717
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 116 (45.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG I L K+A + G+A+ G HH GFC + +++ +LN
Sbjct: 768 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 826
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+++I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 827 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP 868
Score = 47 (21.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 671 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 723
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 114 (45.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 791 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKLN 849
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F D V YI L ++ G +P
Sbjct: 850 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFP 891
Score = 49 (22.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 688 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 745
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 114 (45.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +LN
Sbjct: 802 RMAVGCLLELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKLN 860
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F +D V YI L ++ G +P
Sbjct: 861 VGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP 902
Score = 49 (22.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 699 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 756
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 40/156 (25%), Positives = 69/156 (44%)
Query: 68 LSSEGFLDKNCI-VEPLEASKEDLLVVHSESYLKSLQSSPNV------SIIIEVPPVALF 120
L G L + C+ + EAS+ +L +VHS Y+ LQ + + ++ E V L
Sbjct: 38 LQQHG-LKQRCLQLVAREASEAELGLVHSPEYVALLQGTQALGTRELQALSKEYDAVYLH 96
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
P+ ++ Q+ +L A G A+ G HH GFC + ++++
Sbjct: 97 PSTFHCARLAVGAALQLVDAVLTG--AVRNGLALVRPPG-HHSQRATANGFCVFNNVAIA 153
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+A + + R++I+D D H G G + F D V
Sbjct: 154 AKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSV 189
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP-N----- 107
HP + + I L G K + +A+ E+L VHSE++ ++P N
Sbjct: 673 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 732
Query: 108 ---VSIIIEVPPVAL-FPNCLVQRKVLYP--FRKQVGGTI-LAAKLAK---ERGWAINVG 157
S+ + +P + + + +V R VG + L K+A + G+A+
Sbjct: 733 SSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRP 792
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH GFC + +++ +LN+S+++I+D D H GNG ++ F +D V
Sbjct: 793 PG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 851
Query: 218 ILDM 221
+ +
Sbjct: 852 YMSL 855
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 109 (43.4 bits), Expect = 0.00042, P = 0.00042
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++ F
Sbjct: 51 AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEAFYL 108
Query: 213 DSRVYILDMFNPGIY 227
RV + G Y
Sbjct: 109 TDRVMTVSFHKYGNY 123
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 108 (43.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + L K+A + G+A+ G HH GFC + +++ +L+
Sbjct: 356 RLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAVAAKLLQQRLS 414
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
+S+++I+D D H GNG ++ F SD V + +
Sbjct: 415 VSKILIVDWDVHHGNGTQQAFYSDPSVLYMSL 446
Score = 49 (22.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 254 GSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 311
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 114 (45.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + L K+A + G+A+ G HH GFC + +++ +L+
Sbjct: 772 RLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLS 830
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+ +++D D H GNG ++ F SD RV YI L ++ G +P
Sbjct: 831 VSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFP 872
Score = 47 (21.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSETHALLYGTNP 727
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP-N----- 107
HP + + I L G K + +A+ E+L VHSE++ ++P N
Sbjct: 672 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLD 731
Query: 108 ---VSIIIEVPPVAL-FPNCLVQRKVLYP--FRKQVGGTI-LAAKLAK---ERGWAINVG 157
S+ + +P + + + +V R VG + L K+A + G+A+
Sbjct: 732 SSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRP 791
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH GFC + +++ +LN+S+++I+D D H GNG ++ F +D V
Sbjct: 792 PG-HHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 850
Query: 218 ILDM 221
+ +
Sbjct: 851 YMSL 854
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 35/150 (23%), Positives = 67/150 (44%)
Query: 74 LDKNC-IVEPLEASKEDLLVVHSESYLKSLQSSPNV------SIIIEVPPVALFPNCLVQ 126
L++ C + EAS+E+L +VHS Y+ +Q + + ++ + V P+
Sbjct: 43 LEERCQCLSVCEASEEELGLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHC 102
Query: 127 RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186
++ ++ +L A G A+ G HH GFC + ++++ +A
Sbjct: 103 ARLAAGAALRLVDAVLTG--AVHNGVALVRPPG-HHSQRAAANGFCVFNNVAIAARHAKQ 159
Query: 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ + R++I+D D H G G + F D V
Sbjct: 160 KYGLQRILIVDWDVHHGQGIQYIFEDDPSV 189
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 113 (44.8 bits), Expect = 0.00058, P = 0.00058
Identities = 54/198 (27%), Positives = 74/198 (37%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y PD G HP + + G K + P +E L VH
Sbjct: 9 YDPDVGNFHYGAG--HPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCPVHGVPL 66
Query: 99 L--------KSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ KSL S + S + E +FP L + Y G T L K+
Sbjct: 67 IWFSTRFGPKSLLNGSVSGSGVEEGREFPVFPG-LFEFCSRYTGASLQGATQLNNKICDI 125
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
AIN GG HH E GFC DI + I ++ + RV+ ID+D H G+G ++
Sbjct: 126 ---AINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDIHHGDGVQEA 180
Query: 210 FSSDSRVYILDMFNPGIY 227
F RV + G Y
Sbjct: 181 FYLTDRVMTVSFHKYGNY 198
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 111 (44.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
HH D+G GFC + ++++ YA + + RV I+D D H GNG E
Sbjct: 127 HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTE 173
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 111 (44.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
HH D+G GFC + ++++ YA + + RV I+D D H GNG E
Sbjct: 127 HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTE 173
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 111 (44.1 bits), Expect = 0.00069, P = 0.00069
Identities = 43/157 (27%), Positives = 67/157 (42%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPP-------VALFPNCLVQRKVLY 131
EP+ ++ D+ VHSE+YL + S E P +A LV+R V
Sbjct: 44 EPV--TETDMARVHSEAYLDRFKTLSDAGGGNAGEFSPFGSGSYEIAALSAGLVKRAVF- 100
Query: 132 PFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS 191
V GT + +A++ G HH D GFC A+I++ I A + ++
Sbjct: 101 ---DVVDGTF-------DNAYALSRPPG-HHAMRDGSMGFCLLANIAIAIEAARAERGLT 149
Query: 192 RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
RV ++D D H GNG + F V + + +P
Sbjct: 150 RVAVLDWDVHHGNGTQDIFYEREDVLTISIHQENCFP 186
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 39/161 (24%), Positives = 67/161 (41%)
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-PNVSIIIEVPPVALFPNCLVQRKVLYP 132
LD + PL A+++DLL +H Y+ ++ + P+ L P V
Sbjct: 37 LDLRRVTAPL-AAEDDLLRIHPAGYVADIRDARPDEGFAQIDGDTFLSPG-----SVDAA 90
Query: 133 FRKQVGGTILAAKL-----AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ 187
FR G + A + A+ AI G HH + GFC + + +L +A
Sbjct: 91 FRA-AGAVVRAVDMVLGGEAQNAFCAIRPPG--HHAERETAMGFCLFGNAALAAKHALDH 147
Query: 188 LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ RV ++D D H GNG + ++R ++ ++P
Sbjct: 148 HGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMPLWP 188
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 110 (43.8 bits), Expect = 0.00073, P = 0.00073
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
K A+ A+ G HH D GFC + +I++ +A + R+ I+D D H GN
Sbjct: 110 KRARNAFCAVRPPG--HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGN 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G + F + +V + YP
Sbjct: 168 GTQAAFRRNPQVLYVSTHQYPWYP 191
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 105 (42.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 140 TILAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
T LA K+A + G+A+ G HH GFC + +++ Q S+++I+
Sbjct: 646 TDLAFKVASRELKNGFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIV 704
Query: 197 DLDAHQGNGHEKDFSSDSRV-YI 218
D D H GNG ++ F D V YI
Sbjct: 705 DWDVHHGNGTQQTFYQDPSVLYI 727
Score = 54 (24.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 28/100 (28%), Positives = 40/100 (40%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFL------GIEKLHPFDSSKWGRICQF 67
E + R+LSS + P LP YD L G HP + + I
Sbjct: 498 EPASQARVLSSS---ETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSR 554
Query: 68 LSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSLQSSP 106
L G L C + +AS E+L VHSE ++ ++P
Sbjct: 555 LQERG-LRSQCECLRGRKASLEELQSVHSERHVLLYGTNP 593
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 109 (43.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +L+
Sbjct: 588 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKLS 646
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F D V YI L ++ G +P
Sbjct: 647 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFP 688
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 485 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 542
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 109 (43.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+AI G HH GFC + +++ +L+
Sbjct: 588 RMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKLS 646
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+ +V+I+D D H GNG ++ F D V YI L ++ G +P
Sbjct: 647 VGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFP 688
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
G +HP + + I L G L K + +A+ +++ VHSE + +SP
Sbjct: 485 GNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSP 542
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 105 (42.0 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 140 TILAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
T LA K+A + G+A+ G HH GFC + +++ Q S+++I+
Sbjct: 702 TDLAFKVASRELKNGFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIV 760
Query: 197 DLDAHQGNGHEKDFSSDSRV-YI 218
D D H GNG ++ F D V YI
Sbjct: 761 DWDVHHGNGTQQTFYQDPSVLYI 783
Score = 54 (24.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 28/100 (28%), Positives = 40/100 (40%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFL------GIEKLHPFDSSKWGRICQF 67
E + R+LSS + P LP YD L G HP + + I
Sbjct: 554 EPASQARVLSSS---ETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSR 610
Query: 68 LSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSLQSSP 106
L G L C + +AS E+L VHSE ++ ++P
Sbjct: 611 LQERG-LRSQCECLRGRKASLEELQSVHSERHVLLYGTNP 649
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 111 (44.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 134 RKQVGGTI-LAAKLAK---ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189
R VG + LA K+A + G+A+ G HH GFC + +++ +L+
Sbjct: 740 RLAVGCVVELAFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLH 798
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRV-YI-LDMFNPG-IYP 228
+S+ +++D D H GNG ++ F SD V Y+ L ++ G +P
Sbjct: 799 VSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFP 840
Score = 47 (21.6 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106
HP + + I L G K + +A+ E+L VHSE++ ++P
Sbjct: 643 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNP 695
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 244 0.00098 113 3 11 22 0.40 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 184
No. of states in DFA: 607 (65 KB)
Total size of DFA: 192 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.90u 0.26s 20.16t Elapsed: 00:00:01
Total cpu time: 19.93u 0.26s 20.19t Elapsed: 00:00:01
Start: Fri May 10 12:41:59 2013 End: Fri May 10 12:42:00 2013
WARNINGS ISSUED: 1