BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025519
(251 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550810|ref|XP_002516453.1| histone deacetylase, putative [Ricinus communis]
gi|223544273|gb|EEF45794.1| histone deacetylase, putative [Ricinus communis]
Length = 342
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/242 (80%), Positives = 219/242 (90%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S S S T D+ TL+RNRI+SSKLYFDIP+ K+P+IYSP YDISFLGIEKLHPFDSSKW
Sbjct: 16 SRQMSSSTTADSLTLRRNRIISSKLYFDIPLSKVPIIYSPAYDISFLGIEKLHPFDSSKW 75
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL +EG LDKN IVEPLEASK+DLLVVH ESYL SL+SS NV+ IIEVPPV+LFP
Sbjct: 76 GRVCRFLVTEGVLDKNSIVEPLEASKDDLLVVHLESYLSSLRSSANVATIIEVPPVSLFP 135
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
NCLVQ+KVL+PFRKQVGGTILAAKLAKERGWAINVGGGFHHCS+ +GGGFCAYADISLCI
Sbjct: 136 NCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSSGKGGGFCAYADISLCI 195
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AFV+L ISRVMIIDLDAHQGNGHE DF D+R+YILDM+NPGIYP DYEAR +IDQKV
Sbjct: 196 HFAFVRLRISRVMIIDLDAHQGNGHEMDFYDDNRIYILDMYNPGIYPLDYEARNYIDQKV 255
Query: 242 EV 243
E+
Sbjct: 256 EI 257
>gi|225429480|ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
gi|296081627|emb|CBI20632.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/241 (80%), Positives = 220/241 (91%), Gaps = 3/241 (1%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
ETL+R RILSSKLYFD+P+ K+P+IYS YDI+FLG+EKLHPFDSSKWGRIC+FL +G
Sbjct: 21 ETLRRGRILSSKLYFDVPLTKVPIIYSSSYDIAFLGMEKLHPFDSSKWGRICRFLILDGA 80
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN IVEPLEASK+DLLVVHSESYL SL++S NV++IIEVPPVAL PNCLVQ+KVLYPF
Sbjct: 81 LEKNHIVEPLEASKDDLLVVHSESYLNSLKTSLNVAVIIEVPPVALLPNCLVQQKVLYPF 140
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGGTILAAKLAKERGWAINVGGGFHHCSA +GGGFCAYADISLCIHYAF++LNISRV
Sbjct: 141 RKQVGGTILAAKLAKERGWAINVGGGFHHCSAGKGGGFCAYADISLCIHYAFIRLNISRV 200
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV---VNNQYT 250
MIIDLDAHQGNGHE DFS+D RVYILDM+NPGIYP D+EARR+IDQKVEVV N+Y
Sbjct: 201 MIIDLDAHQGNGHELDFSNDRRVYILDMYNPGIYPSDFEARRYIDQKVEVVSGTTTNEYL 260
Query: 251 S 251
+
Sbjct: 261 T 261
>gi|357437493|ref|XP_003589022.1| Histone deacetylase [Medicago truncatula]
gi|355478070|gb|AES59273.1| Histone deacetylase [Medicago truncatula]
Length = 350
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/240 (82%), Positives = 217/240 (90%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR 63
SS PS + +TL RNRILS+KLYFD+P K+PLIYS YDISFLGIEKLHPFDSSKWGR
Sbjct: 2 SSPPSCSAADDTLMRNRILSTKLYFDVPPSKVPLIYSDSYDISFLGIEKLHPFDSSKWGR 61
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC 123
IC+FL S G LDKN IVEPLEASK+DLLVVHSESYL SL+ S NV+ IIEVPPVALFPNC
Sbjct: 62 ICKFLISFGVLDKNRIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNC 121
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
LVQRKVL+PFRKQVGGTILAAKLAKERGWAINVGGGFHHCSA+ GGGFCAYADISLCIH+
Sbjct: 122 LVQRKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHF 181
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
AFVQLNISRV+IIDLDAHQGNGHE DF+ D+RVYILDM+NPGIYP D+EAR +I+QKVEV
Sbjct: 182 AFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDHEARSYINQKVEV 241
>gi|388493714|gb|AFK34923.1| unknown [Lotus japonicus]
Length = 348
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/243 (82%), Positives = 216/243 (88%), Gaps = 3/243 (1%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSSSS TDA L RNRILSSKLYFD+P K+PLIYS YDISFLGIEKLHPFDSSK
Sbjct: 1 MSSSSS---GTDALALARNRILSSKLYFDVPPSKVPLIYSESYDISFLGIEKLHPFDSSK 57
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC FL S LDK CIVEPLEASK+DLLVVHSESYL SL+ S NV+ IIEVPPVALF
Sbjct: 58 WGRICGFLVSFDVLDKKCIVEPLEASKDDLLVVHSESYLNSLKESSNVATIIEVPPVALF 117
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PNCLVQ KVL+PFRKQVGGTILA KLAKERGWAINVGGGFHHCSA++GGGFCAYADISLC
Sbjct: 118 PNCLVQNKVLFPFRKQVGGTILAVKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLC 177
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IH+AFV+LNISRVMIIDLDAHQGNGHE DF+ DSRVYILDM+NPGIYP DY+AR +I+QK
Sbjct: 178 IHFAFVRLNISRVMIIDLDAHQGNGHETDFADDSRVYILDMYNPGIYPWDYDARNYINQK 237
Query: 241 VEV 243
VEV
Sbjct: 238 VEV 240
>gi|356564065|ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glycine max]
Length = 348
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/243 (80%), Positives = 216/243 (88%), Gaps = 4/243 (1%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSSS+ DAE L+RNRILSSKLYFD+ K+PLIYS YDI FLGIEKLHPFDSSK
Sbjct: 1 MSSSSA----NDAEALRRNRILSSKLYFDVSPSKVPLIYSASYDIEFLGIEKLHPFDSSK 56
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC FL S G LDK C+VEPLEASK+DLLVVHSESYL +L+ S V++I+EVPPVAL
Sbjct: 57 WGRICGFLVSFGILDKKCVVEPLEASKDDLLVVHSESYLNTLKQSSKVAMIVEVPPVALI 116
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PNCLVQ+KVL+PFRKQVGGTILAAKLAKERGWAIN+GGGFHHCSA +GGGFCAYADISLC
Sbjct: 117 PNCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINMGGGFHHCSAQKGGGFCAYADISLC 176
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IH+AFV+LNISRVMIIDLDAHQGNGHE DF+ DSRVYILDM+NPGIYP DYEAR +I+QK
Sbjct: 177 IHFAFVRLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQK 236
Query: 241 VEV 243
VEV
Sbjct: 237 VEV 239
>gi|449447110|ref|XP_004141312.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
gi|449486647|ref|XP_004157356.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
Length = 351
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/244 (75%), Positives = 208/244 (85%), Gaps = 1/244 (0%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSS SP D E ++R+RILSSKLYFD+P K+P+IYS YDISFLGIEKLHPFDS K
Sbjct: 1 MSSSLSPD-ANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 59
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGR+CQFL + G L K+ I++PLEA K DLLVVH ESYL SL++S NV+ IIEVPPVALF
Sbjct: 60 WGRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 119
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
P+C+V+ KV PFR QVGG+ILA K+AKE+GWAINVGGGFHHCSA+ GGGFC YADISLC
Sbjct: 120 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLC 179
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IHYAFVQLNIS+ MIIDLDAHQGNGHE DF+ D RVYILDMFNPGIYP DYEARR IDQK
Sbjct: 180 IHYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 239
Query: 241 VEVV 244
VEVV
Sbjct: 240 VEVV 243
>gi|297812823|ref|XP_002874295.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
gi|297320132|gb|EFH50554.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/243 (74%), Positives = 209/243 (86%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEMSSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSAYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EVPPVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVPPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF++L ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQ +
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPNIYPFDYRARRFIDQNI 280
Query: 242 EVV 244
EVV
Sbjct: 281 EVV 283
>gi|326522206|dbj|BAK04231.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/250 (72%), Positives = 219/250 (87%), Gaps = 2/250 (0%)
Query: 1 MSSSSSPSV--TTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDS 58
MSSSS+ +V T A+ L+RNRILSSKLYFD+P K P++YS YDI+FLGIEK+HPFDS
Sbjct: 1 MSSSSAAAVPGGTPADALRRNRILSSKLYFDVPGSKAPVVYSTAYDIAFLGIEKMHPFDS 60
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
SKWGRIC+FL+ EG L+KN +VEPLEAS+EDLLVVH+E+YL SL+SS V+ I+EVPP+
Sbjct: 61 SKWGRICRFLTKEGHLEKNRVVEPLEASQEDLLVVHTEAYLNSLRSSFRVAAIVEVPPLT 120
Query: 119 LFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
L PN LVQ+++LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADIS
Sbjct: 121 LIPNWLVQQRLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADIS 180
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
LCI +AFV+LNISRVMIIDL AHQGNG+EKDF++D RVYILDM+N GIYP DY A+R+ID
Sbjct: 181 LCIQFAFVRLNISRVMIIDLGAHQGNGYEKDFANDGRVYILDMYNAGIYPFDYAAKRYID 240
Query: 239 QKVEVVVNNQ 248
QK+E+V +
Sbjct: 241 QKIELVSGTE 250
>gi|30690103|ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana]
gi|145558941|sp|Q944K3.2|HDA2_ARATH RecName: Full=Histone deacetylase 2
gi|332006134|gb|AED93517.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 387
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/243 (74%), Positives = 209/243 (86%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF++L ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKV
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280
Query: 242 EVV 244
EV+
Sbjct: 281 EVM 283
>gi|21105771|gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]
Length = 340
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 205/236 (86%)
Query: 9 VTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL 68
+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKWGR+C+FL
Sbjct: 1 MATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL 60
Query: 69 SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRK 128
S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FPN LVQ+K
Sbjct: 61 VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQK 120
Query: 129 VLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL 188
VLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCIH+AF++L
Sbjct: 121 VLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRL 180
Query: 189 NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKVEV+
Sbjct: 181 RISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVM 236
>gi|115468630|ref|NP_001057914.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|54291235|dbj|BAD61930.1| putative HDA2 [Oryza sativa Japonica Group]
gi|113595954|dbj|BAF19828.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|125555796|gb|EAZ01402.1| hypothetical protein OsI_23434 [Oryza sativa Indica Group]
gi|215704748|dbj|BAG94776.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 352
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/231 (76%), Positives = 208/231 (90%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
+ L+R+RILSSKLY D+P K P++YSP YDI+FLGIEKLHPFDSSKWGRIC+FL+ EG
Sbjct: 16 DPLRRDRILSSKLYLDVPGSKAPVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGH 75
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN +VEPLEA+K+DLLVVHSESYL SL+SS V+ I+E+PPVA PN LVQ+K+LYPF
Sbjct: 76 LEKNRVVEPLEATKDDLLVVHSESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPF 135
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGG+IL+AKLA ERGWAINVGGGFHHCSA++GGGFCAYADISLCI +AFV+LNISRV
Sbjct: 136 RKQVGGSILSAKLALERGWAINVGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRV 195
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
MIIDLDAHQGNGHEKDF++D RVY LDM+N GIYP D+ A+R+IDQKVE+V
Sbjct: 196 MIIDLDAHQGNGHEKDFANDGRVYTLDMYNAGIYPYDHVAKRYIDQKVELV 246
>gi|242096222|ref|XP_002438601.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
gi|241916824|gb|EER89968.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
Length = 350
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/248 (70%), Positives = 213/248 (85%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
M+SSSSP+ T E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPFDS+K
Sbjct: 1 MASSSSPAPTLAGEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFDSAK 60
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC++L+ EG+LDK +V+PLEA KEDLLVVH+E+YL SL+SS VS I+EVPPV+L
Sbjct: 61 WGRICRYLTREGYLDKKRMVDPLEACKEDLLVVHTEAYLNSLKSSFRVSNIVEVPPVSLV 120
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PN +V +K+LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLC
Sbjct: 121 PNWIVHKKLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
I +AF +LNIS V+IIDLDAHQGNGHEKDF++D RVYI DM+N GIYP D+ A+++IDQK
Sbjct: 181 IQFAFARLNISSVLIIDLDAHQGNGHEKDFANDGRVYIFDMYNAGIYPFDFTAKQYIDQK 240
Query: 241 VEVVVNNQ 248
VE+ +
Sbjct: 241 VELASGTE 248
>gi|357124055|ref|XP_003563722.1| PREDICTED: histone deacetylase 2-like [Brachypodium distachyon]
Length = 352
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/231 (75%), Positives = 207/231 (89%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
+ L+ NRILSSKLY D+P K+P+IYS YDI+FLGIEKLHPFDS+KWGRIC+FL+ EG
Sbjct: 16 DLLRHNRILSSKLYLDVPPSKVPVIYSVAYDIAFLGIEKLHPFDSAKWGRICKFLTKEGH 75
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN +VEPLEASKEDLLVVH++SYL SL++S V+ I+EVPPV+L PN LVQ+K+L+PF
Sbjct: 76 LEKNRVVEPLEASKEDLLVVHTQSYLNSLKTSFRVATIMEVPPVSLIPNWLVQQKLLFPF 135
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AF +LNISRV
Sbjct: 136 RKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAFDRLNISRV 195
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
MIIDLDAHQGNGHEKDF+ D RVYILDM+N GIYP D+ A+R+IDQKVE+V
Sbjct: 196 MIIDLDAHQGNGHEKDFADDGRVYILDMYNAGIYPFDHAAKRYIDQKVELV 246
>gi|195622418|gb|ACG33039.1| histone deacetylase 11 [Zea mays]
Length = 352
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/236 (72%), Positives = 208/236 (88%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 15 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 74
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 75 YLDKKRMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 134
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCIH+AFV+LNIS
Sbjct: 135 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIHFAFVRLNISS 194
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP D+ A+++IDQKVE+V ++
Sbjct: 195 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYPFDFTAKQYIDQKVELVSGSK 250
>gi|413954352|gb|AFW87001.1| histone deacetylase 11 [Zea mays]
Length = 351
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/236 (72%), Positives = 207/236 (87%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 14 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 73
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 74 YLDKKQMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 133
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCI +AFV+LNIS
Sbjct: 134 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIQFAFVRLNISS 193
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP D+ A+++IDQKVE+V ++
Sbjct: 194 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYPFDFTAKQYIDQKVELVSGSK 249
>gi|222635776|gb|EEE65908.1| hypothetical protein OsJ_21754 [Oryza sativa Japonica Group]
Length = 421
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 163/209 (77%), Positives = 191/209 (91%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YSP YDI+FLGIEKLHPFDSSKWGRIC+FL+ EG L+KN +VEPLEA+K+DLLVVHS
Sbjct: 107 PVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGHLEKNRVVEPLEATKDDLLVVHS 166
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
ESYL SL+SS V+ I+E+PPVA PN LVQ+K+LYPFRKQVGG+IL+AKLA ERGWAIN
Sbjct: 167 ESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPFRKQVGGSILSAKLALERGWAIN 226
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHHCSA++GGGFCAYADISLCI +AFV+LNISRVMIIDLDAHQGNGHEKDF++D R
Sbjct: 227 VGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRVMIIDLDAHQGNGHEKDFANDGR 286
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVV 244
VY LDM+N GIYP D+ A+R+IDQKVE+V
Sbjct: 287 VYTLDMYNAGIYPYDHVAKRYIDQKVELV 315
>gi|242060988|ref|XP_002451783.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
gi|241931614|gb|EES04759.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
Length = 365
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 202/254 (79%), Gaps = 14/254 (5%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYFD-IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWG 62
+S+ T+ AE L+R RILSS+LY D +P K P++YSP YDI F GIEK HPFDS+KWG
Sbjct: 2 ASTSGDTSAAEALRRGRILSSRLYLDGVPSSKAPVVYSPAYDIEFNGIEKQHPFDSAKWG 61
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
R+ FL G L + I+EPLEAS++DLLVVHSESYL SL+SS V+ I+EVP VAL PN
Sbjct: 62 RVRNFLVDAGLLQNDRIIEPLEASEDDLLVVHSESYLNSLKSSAKVARIVEVPAVALLPN 121
Query: 123 CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIH 182
LVQ+K+LYPFRKQVGG+IL+AKLA ERG AIN+GGGFHHCSA+EGGGFCAYADISLCIH
Sbjct: 122 LLVQQKLLYPFRKQVGGSILSAKLALERGCAINIGGGFHHCSAEEGGGFCAYADISLCIH 181
Query: 183 YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-------------R 229
+AFV+LNISRVMIIDLDAHQGNGHEKDF SD RVY LDM+N GIYP
Sbjct: 182 FAFVRLNISRVMIIDLDAHQGNGHEKDFGSDERVYTLDMYNSGIYPFCICLQSELPKSAN 241
Query: 230 DYEARRFIDQKVEV 243
D+ A+++IDQK+E+
Sbjct: 242 DHVAKKYIDQKIEL 255
>gi|413954351|gb|AFW87000.1| hypothetical protein ZEAMMB73_180578 [Zea mays]
Length = 240
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 191/216 (88%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 14 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 73
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 74 YLDKKQMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 133
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCI +AFV+LNIS
Sbjct: 134 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIQFAFVRLNISS 193
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP
Sbjct: 194 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYP 229
>gi|16226804|gb|AAL16266.1|AF428336_1 AT5g26040/T1N24_9 [Arabidopsis thaliana]
gi|25090256|gb|AAN72263.1| At5g26040/T1N24_9 [Arabidopsis thaliana]
Length = 261
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 184/218 (84%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
H+AF++L ISRVMIIDLDAHQGNGHE D DS + L
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDSMIKTL 258
>gi|168036173|ref|XP_001770582.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162678103|gb|EDQ64565.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 357
Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 154/240 (64%), Positives = 195/240 (81%), Gaps = 2/240 (0%)
Query: 6 SPSVTTDAETLK-RNRILSSKLYFDIPIF-KLPLIYSPDYDISFLGIEKLHPFDSSKWGR 63
S S+ + E K + RI +S LYF++P K P++YSP Y+ISFLG+EKLHPFDSSKWGR
Sbjct: 2 STSLRSQEELAKQKQRIDASGLYFNVPPGDKDPIVYSPSYNISFLGMEKLHPFDSSKWGR 61
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC 123
+ +FL+ EG L++ IVEP+EA+++DLLVVHSE YL SL+ S V+ I EVPP+AL PN
Sbjct: 62 VQKFLADEGVLNRKRIVEPVEATRDDLLVVHSEEYLDSLKCSSVVAQIAEVPPIALLPNF 121
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
+VQ KVL PFRKQVGGT+L+AKLAKERGWAIN+GGGFHHC A EGGGFCA+ADISL I +
Sbjct: 122 VVQWKVLKPFRKQVGGTVLSAKLAKERGWAINIGGGFHHCCATEGGGFCAHADISLAIQF 181
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
A+ +L I+RVMIIDLDAHQGNGHE+DF +D RVYI+D++N IYP D+EA+R ++Q V +
Sbjct: 182 AYTRLGITRVMIIDLDAHQGNGHERDFMNDDRVYIVDLYNSDIYPWDHEAKRRMNQSVTL 241
>gi|30690100|ref|NP_851078.1| histone deacetylase 2 [Arabidopsis thaliana]
gi|332006133|gb|AED93516.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 359
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 182/243 (74%), Gaps = 28/243 (11%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ G
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERG------------- 207
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
DLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKV
Sbjct: 208 ---------------DLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 252
Query: 242 EVV 244
EV+
Sbjct: 253 EVM 255
>gi|302804117|ref|XP_002983811.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
gi|300148648|gb|EFJ15307.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
Length = 350
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 189/242 (78%), Gaps = 3/242 (1%)
Query: 3 SSSSPSVTTDAETLKRNRILSSKLYF-DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
+SSS DA+ L R I +SKLY + K+P+IYS Y+I+FLG+EKLHPFDSSKW
Sbjct: 5 ASSSGGALYDAQRLAR--IKASKLYVSNASPGKVPVIYSAVYNIAFLGLEKLHPFDSSKW 62
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+ L +G L+ I+EP EA+KEDLLVVH+ YL+SL+ S + I+EVPPVAL P
Sbjct: 63 GRVCELLIQKGELESRRIMEPGEATKEDLLVVHTPEYLESLKRSYVAASILEVPPVALLP 122
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
C+++ KVL PFRKQVGG++LA K+A ERGWAINVGGGFHHC GGGFC YADI+LCI
Sbjct: 123 YCIIRSKVLVPFRKQVGGSVLAGKVAYERGWAINVGGGFHHCCGYRGGGFCVYADITLCI 182
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF LNISR MI+DLDAHQGNGHE+DF+ D RV+I DM+N IYP DYEA+R+ID++V
Sbjct: 183 HFAFANLNISRAMIVDLDAHQGNGHERDFADDDRVFIFDMYNRDIYPLDYEAKRWIDRRV 242
Query: 242 EV 243
E+
Sbjct: 243 EI 244
>gi|168019285|ref|XP_001762175.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162686579|gb|EDQ72967.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 322
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 138/208 (66%), Positives = 174/208 (83%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YS Y++SFLGIEKLHPFD+SKW + FLS +G L + IVEP+EA+++DLLVVH+
Sbjct: 4 PVVYSSSYNVSFLGIEKLHPFDASKWSHVQNFLSDDGVLKQKRIVEPVEATRDDLLVVHT 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
E YL SL SS V+ I EV PVA PN LVQ K+L+PFRKQVGGT+L+AKLAKERGWAIN
Sbjct: 64 EKYLDSLNSSYVVAQITEVAPVAFLPNFLVQWKLLHPFRKQVGGTVLSAKLAKERGWAIN 123
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
+GGGFHHC A+EGGGFCAYADI+L I +A+ +L ISRV+IIDLDAHQGNGHE+DF++D R
Sbjct: 124 IGGGFHHCCANEGGGFCAYADITLAIQFAYTRLAISRVIIIDLDAHQGNGHERDFTNDDR 183
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEV 243
VYI+DM+N IYP+D++AR+ I+Q V +
Sbjct: 184 VYIIDMYNEDIYPQDFKARKRINQAVAL 211
>gi|302814820|ref|XP_002989093.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
gi|300143194|gb|EFJ09887.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
Length = 316
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++YS Y+I+FLG+EKLHPFDSSKWGR+C+ L +G L+ I+EP EA+KEDLLVVH
Sbjct: 1 VPVVYSAVYNIAFLGLEKLHPFDSSKWGRVCELLIQKGELESRRIMEPGEATKEDLLVVH 60
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-GGTILAAKLAKERGWA 153
+ YL+SL+ S + I+EVPPVAL P C+++ KVL PFRKQV GG++LA K+A ERGWA
Sbjct: 61 TPEYLESLKRSYVAASILEVPPVALLPYCIIRSKVLVPFRKQVVGGSVLAGKVAYERGWA 120
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
INVGGGFHHC GGGFC YADI+LCIH+AF LNISR MI+DLDAHQGNGHE+DF+ D
Sbjct: 121 INVGGGFHHCCGYRGGGFCVYADITLCIHFAFANLNISRAMIVDLDAHQGNGHERDFADD 180
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
RV+I DM+N IYP DYEA+R+ID++VE+
Sbjct: 181 DRVFIFDMYNRDIYPLDYEAKRWIDRRVEI 210
>gi|5107816|gb|AAD40129.1|AF149413_10 contains similarity to histone deacetylases; Pfam PF00850,
Score=13.3, E=5e-10, N=1 [Arabidopsis thaliana]
Length = 316
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 151/239 (63%), Positives = 177/239 (74%), Gaps = 30/239 (12%)
Query: 9 VTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL 68
+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKWGR+C+FL
Sbjct: 1 MATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL 60
Query: 69 SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRK 128
S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I E
Sbjct: 61 VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITE--------------- 105
Query: 129 VLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL 188
VGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCIH+AF++L
Sbjct: 106 --------VGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRL 157
Query: 189 NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN---PGIYPRDYEARRFIDQKVEVV 244
ISRVMIIDLDAHQGNGHE D D IL M I+ +DY ARRFIDQKVEV+
Sbjct: 158 RISRVMIIDLDAHQGNGHETDLGDD----ILSMLAFEVRCIFLQDYRARRFIDQKVEVM 212
>gi|390337555|ref|XP_783282.2| PREDICTED: histone deacetylase 11-like [Strongylocentrotus
purpuratus]
Length = 491
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/238 (57%), Positives = 174/238 (73%), Gaps = 4/238 (1%)
Query: 18 RNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN 77
R RI SKLY ++ + P+IYSPDY+ISFLG EKLHPFDS KWG++ L EG
Sbjct: 106 RERIQKSKLYVNVEPHQWPIIYSPDYNISFLGFEKLHPFDSGKWGKVYNLLKKEGMFCDE 165
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
V PLEA+++DLLV H++ Y+ L+ S +V+ I E+PPVAL PN +VQ+KVL P R Q
Sbjct: 166 TTVCPLEATEDDLLVAHTKQYISRLKWSISVAGITEIPPVALLPNYIVQKKVLRPLRLQT 225
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GG+ILAAKLA ERGWAIN+GGGFHHCS+ +GGGFCAYADI+L + + F Q I + MI+D
Sbjct: 226 GGSILAAKLAMERGWAINIGGGFHHCSSKQGGGFCAYADITLALRFLFHQGTIKKAMILD 285
Query: 198 LDAHQGNGHEKDFSSDSR-VYILDMFNPGIYPRDYEARRFIDQKVEV---VVNNQYTS 251
LDAHQGNGHE+DF D VYILD++N IYPRD A+R I +KVEV + + QY +
Sbjct: 286 LDAHQGNGHERDFMQDKESVYILDVYNRHIYPRDGFAKRGISRKVEVNYFIADEQYMT 343
>gi|260804797|ref|XP_002597274.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
gi|229282537|gb|EEN53286.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
Length = 339
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 173/222 (77%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
S++L+ DIP K P++YS DY+I FLG+EKLHPFDS KWG++ ++L G L + +V P
Sbjct: 3 STRLHEDIPQSKWPIVYSSDYNIGFLGLEKLHPFDSGKWGKVFRYLKESGLLKDDDVVTP 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
+EA++EDLL+VHS YL SL+ S V+ I EVPPVAL PN +VQRK+L P R Q GGT++
Sbjct: 63 VEATEEDLLMVHSSGYLNSLKWSMVVAGITEVPPVALLPNFIVQRKLLKPLRLQTGGTVM 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWA+N+GGGFHHCSA+ GGGFCAYADI+L I + F ++ IS+ MI+DLDAH
Sbjct: 123 AGKLATERGWALNIGGGFHHCSAERGGGFCAYADITLSIKFLFERMEGISKAMIVDLDAH 182
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF +DSRVYI+D++N IYP D A+ I +KVE+
Sbjct: 183 QGNGHERDFINDSRVYIMDVYNRYIYPHDSYAKGAIRRKVEL 224
>gi|405959181|gb|EKC25242.1| Histone deacetylase 11 [Crassostrea gigas]
Length = 358
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 172/232 (74%), Gaps = 11/232 (4%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+ LY +I + P+IYSP+Y+I FLG+EKLHPFD+ KWG++ FL G + + V
Sbjct: 14 ETSLYQEIRPTQWPIIYSPEYNIGFLGLEKLHPFDAGKWGKVYGFLKDAGMIRDDTTVRA 73
Query: 83 LEASKEDLLVVHSESYLKSLQSSP----------NVSIIIEVPPVALFPNCLVQRKVLYP 132
EA++ DLLVVH++ YL +L+ S NV+ I EVPPVAL PN +VQRKVL P
Sbjct: 74 TEATERDLLVVHTKGYLNNLKLSSIIEGVDEWSINVAQITEVPPVALLPNFIVQRKVLRP 133
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-IS 191
FR GGTILA KLA+ERGWAIN+GGGFHHCSAD GGGFCAYADI+L IH+ F +L IS
Sbjct: 134 FRYHTGGTILAGKLAQERGWAINIGGGFHHCSADRGGGFCAYADITLSIHFMFDRLQGIS 193
Query: 192 RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+V+IIDLDAHQGNGHE+DF D RVYI+D++N GIYP D A+R I++KVE+
Sbjct: 194 KVLIIDLDAHQGNGHERDFMDDKRVYIMDVYNRGIYPHDGYAKRAINKKVEL 245
>gi|348518091|ref|XP_003446565.1| PREDICTED: histone deacetylase 11-like [Oreochromis niloticus]
Length = 367
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/228 (58%), Positives = 172/228 (75%), Gaps = 1/228 (0%)
Query: 17 KRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
+++R + LY IP LP++Y PDY+I+F+G+EKLHPFD+ KWG++ +FL E F++
Sbjct: 9 EKSRCHRTDLYASIPRTCLPIVYHPDYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFIND 68
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+VE EA++EDLLVVH++ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q
Sbjct: 69 GNLVEAREAAEEDLLVVHTKRYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQ 128
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMI 195
GGTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISRV I
Sbjct: 129 TGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRVTI 188
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
IDLDAHQGNGHE+DF D RV+I+DM+N IYP D A+R I +KVE+
Sbjct: 189 IDLDAHQGNGHERDFLDDRRVFIMDMYNRYIYPGDEYAKRAIKRKVEL 236
>gi|291230574|ref|XP_002735241.1| PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii]
Length = 376
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 175/244 (71%), Gaps = 1/244 (0%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
+ SSS + +++ + + LY D+ + P++YS DY+I FLG+EKLHPFD+ KW
Sbjct: 3 AESSSNGDDEGKKRVQKKPLHKTDLYIDVSDRQWPIVYSQDYNIGFLGLEKLHPFDAGKW 62
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
G++ FL +G L + I+ P EA ++DL V+H++ YL SL+ S NV+ I EVPPVA P
Sbjct: 63 GKVYAFLKEDGMLRDDTIIAPREAGEKDLSVIHTKRYLDSLKWSVNVATITEVPPVAFLP 122
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N +VQRKVL PFR Q GGTILAAKLA ERGWAIN+GGGFHHCS D GGGFCAYADISL I
Sbjct: 123 NFIVQRKVLKPFRIQTGGTILAAKLAIERGWAINIGGGFHHCSGDRGGGFCAYADISLAI 182
Query: 182 HYAFVQ-LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
+ F + + MI+DLDAHQGNGHE+DF D RVY +D++N IYP D A+R I++K
Sbjct: 183 KFLFDRDPKTKKAMIVDLDAHQGNGHERDFMEDDRVYTMDVYNRHIYPHDGFAKRGINRK 242
Query: 241 VEVV 244
VE++
Sbjct: 243 VELM 246
>gi|355559429|gb|EHH16157.1| hypothetical protein EGK_11401, partial [Macaca mulatta]
gi|355746507|gb|EHH51121.1| hypothetical protein EGM_10451, partial [Macaca fascicularis]
Length = 347
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 168/225 (74%), Gaps = 1/225 (0%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +
Sbjct: 1 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSML 60
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
VE EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GG
Sbjct: 61 VEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 120
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDL 198
TI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDL
Sbjct: 121 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 180
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
DAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 181 DAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|340381662|ref|XP_003389340.1| PREDICTED: histone deacetylase 11-like, partial [Amphimedon
queenslandica]
Length = 270
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/245 (55%), Positives = 180/245 (73%), Gaps = 8/245 (3%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR 63
+SP+V D N SKLY D+ K P++YSPDYDISF +E +HPFDS+KW R
Sbjct: 2 GNSPTVPED------NSGEDSKLYIDVDRHKWPILYSPDYDISFWKLETIHPFDSTKWKR 55
Query: 64 ICQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
+ Q L+ + L IV+P EAS DLLVVH++ YL+SL+SS NV++++EVPP+A+ PN
Sbjct: 56 VYQLLNEKNMLKGLEDIVQPNEASVSDLLVVHTQEYLESLKSSTNVAMVVEVPPLAIVPN 115
Query: 123 CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIH 182
+VQ K+L PFR Q GGTILA KLA ERGWAIN+GGGFHHC + EGGGFCAYADI+L I
Sbjct: 116 YIVQNKMLRPFRYQTGGTILAGKLAMERGWAINIGGGFHHCCSGEGGGFCAYADITLSIR 175
Query: 183 YAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
+ F ++ ++ +VMI+D DAHQGNGHE+DF D +VYI+DM+N IYP D +A+ I+ K+
Sbjct: 176 FLFQRVPDVKKVMIVDFDAHQGNGHERDFMDDDKVYIMDMYNRWIYPNDIKAKSAINMKI 235
Query: 242 EVVVN 246
E+ V+
Sbjct: 236 ELDVH 240
>gi|297669993|ref|XP_002813164.1| PREDICTED: histone deacetylase 11 isoform 1 [Pongo abelii]
Length = 347
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIQFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|426339523|ref|XP_004033698.1| PREDICTED: histone deacetylase 11 isoform 1 [Gorilla gorilla
gorilla]
Length = 347
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|432859825|ref|XP_004069255.1| PREDICTED: histone deacetylase 11-like [Oryzias latipes]
Length = 664
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 167/221 (75%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY +P LP++Y PDY+I+F+G+EKLHPFD+ KWG++ FL E FL IVE
Sbjct: 313 TNLYTSLPQTCLPIVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEECFLTDADIVEAR 372
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++EDLLVVH++ YLK L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+A
Sbjct: 373 EATEEDLLVVHTKHYLKRLKWSVVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMA 432
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+++GGGFCAYADI+L I + F ++ IS+ IIDLDAHQ
Sbjct: 433 GKLAVDRGWAINVGGGFHHCSSNKGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQ 492
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+
Sbjct: 493 GNGHERDFLEDRRVYIMDVYNSHIYPGDGHAKRAIRRKVEL 533
>gi|217272877|ref|NP_079103.2| histone deacetylase 11 isoform 1 [Homo sapiens]
gi|26394832|sp|Q96DB2.1|HDA11_HUMAN RecName: Full=Histone deacetylase 11; Short=HD11
gi|16307174|gb|AAH09676.1| Histone deacetylase 11 [Homo sapiens]
gi|117644908|emb|CAL37920.1| hypothetical protein [synthetic construct]
gi|117646466|emb|CAL38700.1| hypothetical protein [synthetic construct]
gi|119584569|gb|EAW64165.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|119584572|gb|EAW64168.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|208966472|dbj|BAG73250.1| histone deacetylase 11 [synthetic construct]
gi|410220854|gb|JAA07646.1| histone deacetylase 11 [Pan troglodytes]
gi|410262586|gb|JAA19259.1| histone deacetylase 11 [Pan troglodytes]
gi|410287274|gb|JAA22237.1| histone deacetylase 11 [Pan troglodytes]
gi|410336795|gb|JAA37344.1| histone deacetylase 11 [Pan troglodytes]
Length = 347
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|390475353|ref|XP_002758694.2| PREDICTED: histone deacetylase 11 [Callithrix jacchus]
Length = 347
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|388454314|ref|NP_001252584.1| histone deacetylase 11 [Macaca mulatta]
gi|26394837|sp|Q9GKU5.2|HDA11_MACFA RecName: Full=Histone deacetylase 11; Short=HD11
gi|387542188|gb|AFJ71721.1| histone deacetylase 11 isoform 1 [Macaca mulatta]
Length = 347
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|402859321|ref|XP_003894111.1| PREDICTED: histone deacetylase 11 isoform 1 [Papio anubis]
Length = 347
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|350591475|ref|XP_003483278.1| PREDICTED: histone deacetylase 11-like, partial [Sus scrofa]
Length = 276
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 165/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|149728400|ref|XP_001489672.1| PREDICTED: histone deacetylase 11-like [Equus caballus]
Length = 347
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
S++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 STQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEENLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF +D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMNDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|301770641|ref|XP_002920740.1| PREDICTED: histone deacetylase 11-like [Ailuropoda melanoleuca]
Length = 411
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 166/226 (73%), Gaps = 1/226 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
+R +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L
Sbjct: 64 SRPHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGM 123
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VE EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q G
Sbjct: 124 LVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTG 183
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIID 197
GTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+D
Sbjct: 184 GTIMAGKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVD 243
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
LDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 244 LDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 289
>gi|10438544|dbj|BAB15272.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 165/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETPWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|348556215|ref|XP_003463918.1| PREDICTED: histone deacetylase 11-like [Cavia porcellus]
Length = 488
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 145 ATQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 204
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS +DLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 205 REASDDDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 264
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 265 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERMEGISRATIIDLDAH 324
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 325 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 366
>gi|348605146|ref|NP_001100080.2| histone deacetylase 11 [Rattus norvegicus]
gi|149036741|gb|EDL91359.1| histone deacetylase 11 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|183985828|gb|AAI66430.1| Hdac11 protein [Rattus norvegicus]
Length = 347
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVEL 225
>gi|417399348|gb|JAA46694.1| Putative histone deacetylase [Desmodus rotundus]
Length = 347
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+S+LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 TSQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPLIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLTIKFLFERVEGISRATIVDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|431899765|gb|ELK07712.1| Histone deacetylase 11 [Pteropus alecto]
Length = 417
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 164/226 (72%), Gaps = 1/226 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
R ++ LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L
Sbjct: 70 GRPHTTHLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGM 129
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VE EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q G
Sbjct: 130 LVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTG 189
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIID 197
GTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+D
Sbjct: 190 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVD 249
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
LDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 250 LDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIKRKVEL 295
>gi|432097765|gb|ELK27813.1| Histone deacetylase 11 [Myotis davidii]
Length = 360
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 165/222 (74%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 21 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 80
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 81 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRIQTGGTIM 140
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 141 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 200
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 201 QGNGHERDFMGDQRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 242
>gi|21450317|ref|NP_659168.1| histone deacetylase 11 [Mus musculus]
gi|26394805|sp|Q91WA3.1|HDA11_MOUSE RecName: Full=Histone deacetylase 11; Short=HD11
gi|16740659|gb|AAH16208.1| Histone deacetylase 11 [Mus musculus]
gi|26337759|dbj|BAC32565.1| unnamed protein product [Mus musculus]
gi|148666877|gb|EDK99293.1| histone deacetylase 11 [Mus musculus]
Length = 347
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVEL 225
>gi|449473359|ref|XP_002192262.2| PREDICTED: histone deacetylase 11 [Taeniopygia guttata]
Length = 371
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 170/234 (72%), Gaps = 1/234 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
+R ++LY D P+ P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + +
Sbjct: 11 SRPHRTELYEDPPLGCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDL 70
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
IV+ EA+ EDLLVVH+ YL L+ S V+ I E+PPVA PN +VQRKVL P R Q G
Sbjct: 71 IVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFIVQRKVLKPLRTQTG 130
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIID 197
GTI+A KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +SR IID
Sbjct: 131 GTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIID 190
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQYTS 251
LDAHQGNGHE+DF D RVYI+D +N IYP D A+R I +KVE+ + T
Sbjct: 191 LDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTE 244
>gi|281344338|gb|EFB19922.1| hypothetical protein PANDA_009507 [Ailuropoda melanoleuca]
Length = 345
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 163/222 (73%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 2 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 61
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 62 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 121
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 122 VRKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 181
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 182 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 223
>gi|395847170|ref|XP_003796256.1| PREDICTED: histone deacetylase 11 [Otolemur garnettii]
Length = 347
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 164/221 (74%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 5 TQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDCMLVEAK 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA ERGWAINVGGGFHHCS+D GGGFCAYADISL I + F ++ ISR IIDLDAHQ
Sbjct: 125 GKLAVERGWAINVGGGFHHCSSDRGGGFCAYADISLAIKFLFDRVEGISRATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 185 GNGHERDFMDDQRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|326927845|ref|XP_003210099.1| PREDICTED: histone deacetylase 11-like [Meleagris gallopavo]
Length = 425
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 169/228 (74%), Gaps = 1/228 (0%)
Query: 17 KRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
+R R ++LY +P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E +
Sbjct: 67 QRKRPHRTELYEGVPSTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGD 126
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+ IV+ EA+ EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q
Sbjct: 127 DLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRTQ 186
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMI 195
GGTI+A KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ I
Sbjct: 187 TGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATI 246
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
IDLDAHQGNGHE+DF +D RVYI+D++N IYP D A+R I +KVE+
Sbjct: 247 IDLDAHQGNGHERDFMNDHRVYIMDVYNRYIYPGDGFAKRAIKRKVEL 294
>gi|380798593|gb|AFE71172.1| histone deacetylase 11 isoform 1, partial [Macaca mulatta]
Length = 338
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 161/215 (74%), Gaps = 1/215 (0%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE EAS+ED
Sbjct: 2 VPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEED 61
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
LLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA E
Sbjct: 62 LLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVE 121
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEK 208
RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+
Sbjct: 122 RGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 181
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 182 DFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 216
>gi|395516785|ref|XP_003762566.1| PREDICTED: histone deacetylase 11 [Sarcophilus harrisii]
Length = 331
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 164/221 (74%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+KLY ++ P+IYSP Y+I+F+G+EKLHPFD+ KWG++ FL E FL IVE
Sbjct: 5 TKLYQEVSKTCWPIIYSPRYNITFMGLEKLHPFDAGKWGKVVHFLKEENFLTDVMIVEAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++EDL VVH++ YL L+ S V+ I E+PPV PN LVQR VL P R Q GGTI+A
Sbjct: 65 EATEEDLRVVHTQRYLNKLKWSFVVATITEIPPVICLPNFLVQRHVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA ERGWAIN+GGGFHHCS+D GGGFCAYADISL I + F ++ +S+ IIDLDAHQ
Sbjct: 125 GKLAIERGWAINIGGGFHHCSSDRGGGFCAYADISLSIKFLFERVEGVSKATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF DSRVYI+D++N IYP D A+R I +K+E+
Sbjct: 185 GNGHERDFMDDSRVYIMDIYNRNIYPGDSFAKRAIKRKIEL 225
>gi|449266313|gb|EMC77377.1| Histone deacetylase 11, partial [Columba livia]
Length = 334
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 165/221 (74%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY D P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + + IV+
Sbjct: 3 TALYEDPPAACWPIVYSPDYNITFVGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAR 62
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ EDLLVVH+ YL L+ S V+ I E+PPVA PN +VQRKVL P R Q GGTI+A
Sbjct: 63 EATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFVVQRKVLRPLRTQTGGTIMA 122
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ IIDLDAHQ
Sbjct: 123 GKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSKATIIDLDAHQ 182
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+
Sbjct: 183 GNGHERDFMDDHRVYIMDVYNRYIYPGDGFAKRAIKRKVEL 223
>gi|118096828|ref|XP_414321.2| PREDICTED: histone deacetylase 11 [Gallus gallus]
Length = 358
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 165/221 (74%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + + IV+
Sbjct: 5 TELYEGVPPTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGDDLIVQAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ IIDLDAHQ
Sbjct: 125 GKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF +D RVYI+D +N IYP D A+R I +KVE+
Sbjct: 185 GNGHERDFMNDHRVYIMDAYNRYIYPGDGFAKRAIKRKVEL 225
>gi|50344998|ref|NP_001002171.1| histone deacetylase 11 [Danio rerio]
gi|49256677|gb|AAH74052.1| Zgc:91942 [Danio rerio]
gi|182892122|gb|AAI65866.1| Zgc:91942 protein [Danio rerio]
Length = 366
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 166/221 (75%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY ++P LP++YSP+Y+I+F+G+EKLHPFD+ KWG++ +FL E F+ IV
Sbjct: 16 TELYAEVPASCLPIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFITDEIIVLAR 75
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS+ DLLVVH+ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+A
Sbjct: 76 EASEADLLVVHTARYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMA 135
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ ++ IIDLDAHQ
Sbjct: 136 GKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQ 195
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+
Sbjct: 196 GNGHERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRKVEL 236
>gi|397511877|ref|XP_003826289.1| PREDICTED: histone deacetylase 11 isoform 1 [Pan paniscus]
Length = 348
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 165/223 (73%), Gaps = 2/223 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPEARWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT-I 141
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGT
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTHK 123
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
LA KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 124 LAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 183
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 226
>gi|156120759|ref|NP_001095526.1| histone deacetylase 11 [Bos taurus]
gi|154757388|gb|AAI51742.1| HDAC11 protein [Bos taurus]
gi|296474662|tpg|DAA16777.1| TPA: histone deacetylase 11 [Bos taurus]
Length = 386
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+FLG+EKLHPFD+ KWG++ L E L + +VE
Sbjct: 5 TQLYQHVPDSRWPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+ I+DLDAHQ
Sbjct: 125 GKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 185 GNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|440903563|gb|ELR54202.1| Histone deacetylase 11, partial [Bos grunniens mutus]
Length = 386
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+FLG+EKLHPFD+ KWG++ L E L + +VE
Sbjct: 4 TQLYQHVPDSRWPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAR 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 64 EASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+ I+DLDAHQ
Sbjct: 124 GKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 GNGHERDFMGDRRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 224
>gi|196005073|ref|XP_002112403.1| hypothetical protein TRIADDRAFT_25844 [Trichoplax adhaerens]
gi|190584444|gb|EDV24513.1| hypothetical protein TRIADDRAFT_25844, partial [Trichoplax
adhaerens]
Length = 374
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 167/221 (75%), Gaps = 1/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY DI + P++YS YDISF G+EKLHPFDS KWG++ L S + + IV P
Sbjct: 1 TNLYIDIRDNQWPIVYSDRYDISFFGVEKLHPFDSCKWGKVMAILKSMKLIGDDDIVIPN 60
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++ DLLVVH SYLKSL+ S V+ IIEVP VAL PN +VQ+++L FR Q GGT+LA
Sbjct: 61 EATENDLLVVHPSSYLKSLKWSITVANIIEVPFVALLPNFVVQKRILKAFRYQTGGTVLA 120
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA ERGWAIN+GGGFHHCS+D GGGFCAYADI++C+ F ++ + + +IIDLDAHQ
Sbjct: 121 GKLALERGWAINIGGGFHHCSSDNGGGFCAYADITICLKMLFQHVDGVRKAVIIDLDAHQ 180
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF+ +S VYILD++N IYPRD +ARR I +++++
Sbjct: 181 GNGHERDFAYNSNVYILDLYNADIYPRDKDARRGISKEIKI 221
>gi|443694557|gb|ELT95657.1| hypothetical protein CAPTEDRAFT_197333 [Capitella teleta]
Length = 377
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/253 (52%), Positives = 170/253 (67%), Gaps = 33/253 (13%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LYFDI + P++YSP+Y+I+FLG+EKLHPFDS KWGR+ +FL + IV+P
Sbjct: 16 TELYFDIQETQWPIVYSPEYNIAFLGLEKLHPFDSGKWGRVYEFLKEAKMIYDYTIVKPK 75
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL- 142
EA DLLVVHS Y+ +L+ S NV+ I EVPPVAL PN +VQ+KVL PFR Q GGTIL
Sbjct: 76 EAQTIDLLVVHSMRYISTLRWSMNVASITEVPPVALVPNFIVQKKVLRPFRYQTGGTILI 135
Query: 143 -------------------------------AAKLAKERGWAINVGGGFHHCSADEGGGF 171
AAKLA ERGW+IN+GGGFHHC A++GGGF
Sbjct: 136 PDPTCSIVKYVIGFFVYTLVSMEIDQEVELTAAKLAVERGWSINIGGGFHHCCAEKGGGF 195
Query: 172 CAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
CAYADI+L I + + + IS+VMI+DLDAHQGNGH +DF + VYILD++N IYPRD
Sbjct: 196 CAYADITLAIRFLLQRTSTISKVMIVDLDAHQGNGHARDFMDEDGVYILDIYNRQIYPRD 255
Query: 231 YEARRFIDQKVEV 243
A+R I +KVE+
Sbjct: 256 GFAKRGIRRKVEL 268
>gi|156393770|ref|XP_001636500.1| predicted protein [Nematostella vectensis]
gi|156223604|gb|EDO44437.1| predicted protein [Nematostella vectensis]
Length = 364
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 158/222 (71%), Gaps = 1/222 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+S LY DI + P++YS Y+I F+G+E+LHPFDS KWGR+ L +D + +VEP
Sbjct: 21 ASHLYIDIKATQWPIVYSSGYNIGFMGLERLHPFDSGKWGRVFNMLKEAKLIDDSTVVEP 80
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
E S+EDLL+VH++ YL SL+ S V+ I EVPPVA PN +VQ K+L P R Q GGTIL
Sbjct: 81 REVSREDLLIVHTKKYLDSLKWSVVVAQICEVPPVAFLPNFIVQHKLLRPLRLQTGGTIL 140
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
AAKLA ERGWAIN+GGGFHHCS GGGFCAYADISL + + F + + +VMIIDLDAH
Sbjct: 141 AAKLAMERGWAINIGGGFHHCSGTSGGGFCAYADISLAVMFLFNHFDSVKKVMIIDLDAH 200
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE DF + RVYI+D +N IYP + + I + V++
Sbjct: 201 QGNGHEADFIKEERVYIMDAYNSHIYPGCMKVKSAIKRDVQL 242
>gi|91080831|ref|XP_970656.1| PREDICTED: similar to Histone deacetylase 11 (HD11) [Tribolium
castaneum]
gi|270005420|gb|EFA01868.1| hypothetical protein TcasGA2_TC007473 [Tribolium castaneum]
Length = 331
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 164/224 (73%), Gaps = 2/224 (0%)
Query: 22 LSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVE 81
+++KLY DI + P+IY P+Y++ FLG+EKLHPFD+ KWG I ++L S G ++ +
Sbjct: 1 MNTKLYVDIGPEQWPIIYRPEYNVRFLGLEKLHPFDAGKWGNIYKYLKSCGLVNDETLSV 60
Query: 82 PLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI 141
P EA+ EDLL VH++ YLKSL+ S NV++I EV P+ L PN LVQR L P R Q GG++
Sbjct: 61 PNEATTEDLLTVHTKKYLKSLKCSFNVALIAEVLPLCLVPNYLVQRGYLRPMRFQTGGSV 120
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLD 199
LA KLA ERGWAIN+GGGFHHC +GGGFC YADI+L IH+ F ++ VMI+DLD
Sbjct: 121 LAGKLALERGWAINIGGGFHHCCGSKGGGFCVYADITLLIHFVFNHHPRSVQNVMIVDLD 180
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
AHQGNG+++DF + VYI+D++N GIYP D A+ +I +KVE+
Sbjct: 181 AHQGNGYQRDFKDNPNVYIIDVYNKGIYPFDKLAKEYITRKVEL 224
>gi|332231745|ref|XP_003265055.1| PREDICTED: histone deacetylase 11 isoform 1 [Nomascus leucogenys]
Length = 319
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L N +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDNMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 181 YPGDRFAKQAIRRKVEL 197
>gi|334338492|ref|XP_003341796.1| PREDICTED: histone deacetylase 11-like [Monodelphis domestica]
Length = 476
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 157/226 (69%), Gaps = 1/226 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY ++ P++YSP Y+I FLG+EKLHPFD KWGR+ L FL IVE
Sbjct: 152 TSLYREVSETCWPIVYSPKYNIKFLGLEKLHPFDVEKWGRVVHLLKEGNFLSDVMIVEAQ 211
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
E S+EDL V H+E YL+ L+ S +V+ IIE+ P+A PN LVQR VL P R Q GGTI+A
Sbjct: 212 EVSEEDLKVAHTEQYLRKLKCSFSVAKIIEMLPIAFIPNFLVQRTVLRPLRFQTGGTIMA 271
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA + GWAIN+GGGFHHCS GG FC YADI+LCI + F ++ ISRV IIDLDAHQ
Sbjct: 272 GKLAVDYGWAINIGGGFHHCSGSRGGRFCIYADITLCIKFLFERVAGISRVTIIDLDAHQ 331
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
GNGHE DF DSRVYI+D++N IYP D A+R I Q VE+ N +
Sbjct: 332 GNGHETDFLDDSRVYIMDVYNYHIYPYDSIAKRAIRQMVELDWNTE 377
>gi|11611547|dbj|BAB18987.1| hypothetical protein [Macaca fascicularis]
Length = 319
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 181 YPGDRFAKQAIRRKVEL 197
>gi|332231747|ref|XP_003265056.1| PREDICTED: histone deacetylase 11 isoform 2 [Nomascus leucogenys]
Length = 343
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 154/225 (68%), Gaps = 24/225 (10%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L N +
Sbjct: 20 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDNML 79
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
VE EAS+EDLLVVH+ YL L+ RKVL P R Q GG
Sbjct: 80 VEAREASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGG 116
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDL 198
TI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDL
Sbjct: 117 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 176
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
DAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 177 DAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 221
>gi|119584563|gb|EAW64159.1| histone deacetylase 11, isoform CRA_c [Homo sapiens]
Length = 193
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 142/191 (74%), Gaps = 1/191 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFI 237
YP D A++ I
Sbjct: 181 YPGDRFAKQAI 191
>gi|221091523|ref|XP_002170251.1| PREDICTED: histone deacetylase 11-like, partial [Hydra
magnipapillata]
Length = 237
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 161/221 (72%), Gaps = 2/221 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
S+LY DIP K+P+IY+ Y+ISF G+EKLHPFDS KWGRI + L E + K I++
Sbjct: 4 SQLYKDIPYEKVPIIYNSMYNISFFGMEKLHPFDSGKWGRIIKMLVDESVIKKEEIIDSE 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
+ S+ +LL+VH++ YL+SL+SS V+ I E+ PVAL P+ +V R +L PF+ Q GGT+LA
Sbjct: 64 QISETELLLVHTKDYLQSLKSSFTVARITEIWPVALLPHFIVNRNLLIPFKFQTGGTVLA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQ 202
AK+A ERGWAIN+GGGFHHCS+ EGGGFCAYADI+L I + + R +MIIDLDAHQ
Sbjct: 124 AKVAMERGWAINIGGGFHHCSSSEGGGFCAYADITLAIKILKNEFDAVRNIMIIDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GNGHE+DF D VYI+D +N IYP D A I + +++
Sbjct: 184 GNGHERDF-IDKSVYIMDAYNAYIYPSDSSAEAAISRIIKL 223
>gi|297669995|ref|XP_002813165.1| PREDICTED: histone deacetylase 11 isoform 2 [Pongo abelii]
Length = 347
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 152/222 (68%), Gaps = 24/222 (10%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 27 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 86
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ RKVL P R Q GGTI+
Sbjct: 87 REASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIQFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 225
>gi|119584573|gb|EAW64169.1| histone deacetylase 11, isoform CRA_l [Homo sapiens]
Length = 208
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 1/208 (0%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
M SS + + D R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ K
Sbjct: 1 MGRVSSAAGSGDPRPPPWLRLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGK 60
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S V+ I E+PPV
Sbjct: 61 WGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL 120
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L
Sbjct: 121 PNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLA 180
Query: 181 IHYAFVQL-NISRVMIIDLDAHQGNGHE 207
I + F ++ ISR IIDLDAHQGNGHE
Sbjct: 181 IKFLFERVEGISRATIIDLDAHQGNGHE 208
>gi|426339525|ref|XP_004033699.1| PREDICTED: histone deacetylase 11 isoform 2 [Gorilla gorilla
gorilla]
Length = 349
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 152/222 (68%), Gaps = 24/222 (10%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 29 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 88
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ RKVL P R Q GGTI+
Sbjct: 89 REASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGGTIM 125
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 126 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 185
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 186 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 227
>gi|339249801|ref|XP_003373888.1| histone deacetylase 2 [Trichinella spiralis]
gi|316969917|gb|EFV53946.1| histone deacetylase 2 [Trichinella spiralis]
Length = 359
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 159/226 (70%), Gaps = 2/226 (0%)
Query: 20 RILSSKLYFDIPIFKL-PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
RI SSKLY + L ++ P YDI F GIEKLHPFD+ KWGR+ L G++++
Sbjct: 10 RINSSKLYAPLKEQGLHSFVFDPIYDIRFFGIEKLHPFDAGKWGRVYNKLVKRGYINEQH 69
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I P EA +DLL+VHS+SYL +L + ++ I+EVP + FP C++ RKVL FR Q G
Sbjct: 70 ICRPREAQYDDLLIVHSKSYLSTLHWNVLIARIMEVPLLIFFPACVIDRKVLKSFRYQTG 129
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+LA +LA E G A+N+GGGFHHCS+ GGGFC YADI+L I + F Q + +VMI+DL
Sbjct: 130 GTVLAVRLAIECGAAVNLGGGFHHCSSKSGGGFCPYADITLAIKFLFAQRLVEKVMIVDL 189
Query: 199 DAHQGNGHEKDF-SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
DAHQGNGHE+DF +S VYILDM+N IYPRD +A++ I + VE+
Sbjct: 190 DAHQGNGHERDFLTSTDNVYILDMYNCDIYPRDVKAKKAIRKAVEI 235
>gi|402585803|gb|EJW79742.1| HDAC11 protein [Wuchereria bancrofti]
Length = 339
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 155/236 (65%), Gaps = 15/236 (6%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
A++ + + +SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G
Sbjct: 20 ADSRQLAAVKASKLYKEIERGQLPIVYHPVYNISFCGIERCHPFDSRKWGRVYETLLQSG 79
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
++N V PLEAS +DL VVHS +YL SL V+ ++EV PVAL P C
Sbjct: 80 MFEENQTVRPLEASMDDLRVVHSSTYLSSLCCPCYVAKMVEVTPVALIPPC--------- 130
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
GTILAAKLA GWAIN+GGGFHH S +GGGFC YADI+L + + F IS+
Sbjct: 131 ------GTILAAKLALTSGWAINIGGGFHHASRSKGGGFCIYADITLALTFLFSNQLISK 184
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
MI+DLDAHQGNGHE DFS D+RVYILDMFN IYP D ARR I + V + V Q
Sbjct: 185 AMIVDLDAHQGNGHENDFSGDNRVYILDMFNSRIYPHDLRARRAIRRSVHLRVGTQ 240
>gi|393906996|gb|EJD74475.1| hypothetical protein LOAG_18214 [Loa loa]
Length = 396
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 158/270 (58%), Gaps = 42/270 (15%)
Query: 21 ILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV 80
+ +SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G ++ +
Sbjct: 28 VKTSKLYKEIEQGQLPIVYHPIYNISFCGIERCHPFDSRKWGRVYETLLQSGMFEERQTI 87
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--- 137
P EAS +DL VVHS +YL SL+ V+ ++E+ PVAL P C++ + +L P R
Sbjct: 88 RPSEASMDDLRVVHSSTYLSSLRCPCYVAKMVEITPVALLPPCIINKVLLKPLRYHTDKL 147
Query: 138 ---------------------------------------GGTILAAKLAKERGWAINVGG 158
GGT+LAAKLA GWAIN+GG
Sbjct: 148 RTDCVKCIGAYSLKSALCCNAALFEVAQVDKCIFLSSFEGGTVLAAKLALTSGWAINIGG 207
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI 218
GFHH S +GGGFC YADI+L + + F IS+ +I+DLDAHQGNGHE DFS DSRVYI
Sbjct: 208 GFHHASRSKGGGFCIYADITLALTFLFSSQLISKAVIVDLDAHQGNGHENDFSGDSRVYI 267
Query: 219 LDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
LDMFN IYP D ARR I + V + V Q
Sbjct: 268 LDMFNSRIYPYDLRARRAIKRSVHLHVGTQ 297
>gi|170579015|ref|XP_001894638.1| histone deacetylase 11 [Brugia malayi]
gi|158598650|gb|EDP36504.1| histone deacetylase 11, putative [Brugia malayi]
Length = 380
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 149/235 (63%), Gaps = 27/235 (11%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G ++N + P
Sbjct: 29 ASKLYKEIERGQLPIVYHPVYNISFCGIERCHPFDSRKWGRVYETLLQSGMFEENQTIRP 88
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG---- 138
LEAS +DL VVHS +YL SL V+ ++EV PVAL P C++ + +L PFR
Sbjct: 89 LEASMDDLRVVHSSTYLSSLCCPCYVAKMVEVTPVALIPPCIINKVLLKPFRYHTDKFDE 148
Query: 139 -----------------------GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYA 175
GTILAAKLA GWAIN+GGGFHH S +GGGFC YA
Sbjct: 149 HTSIYVFIIVHDYANCQLVFNACGTILAAKLALTSGWAINIGGGFHHASRSKGGGFCIYA 208
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
DI+L + + F IS+ MI+DLDAHQGNGHE DFS DSRVYILDMFN IYP D
Sbjct: 209 DITLALTFLFSNQLISKAMIVDLDAHQGNGHENDFSGDSRVYILDMFNXRIYPHD 263
>gi|324513441|gb|ADY45523.1| Histone deacetylase 11 [Ascaris suum]
Length = 365
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 151/224 (67%), Gaps = 3/224 (1%)
Query: 21 ILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV 80
+ ++LY I + P++Y Y+ISF GIEKLHPFDS+KWGR+ L G L + V
Sbjct: 33 VTETRLYSGIRADQWPIVYHSLYNISFFGIEKLHPFDSAKWGRVYNKLIESGMLTEEQFV 92
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
+ +EAS+ DL VVH+ YL SL V+ ++EV VA P+ ++ + +L PFR GG+
Sbjct: 93 QAVEASEHDLRVVHTSCYLASLHCPCRVARLVEVAIVAFLPSFVIDKYLLKPFRYHTGGS 152
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDA 200
ILAA+LA ER WAIN+GGGFHH S GGGFC YADISL +++ F+ ISR MI+DLDA
Sbjct: 153 ILAARLALERNWAINLGGGFHHASRSRGGGFCVYADISLALNFLFLNRLISRAMIVDLDA 212
Query: 201 H---QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H QGNGHE DF+ D+RVYI DMFN IYP D+ A+ I + V
Sbjct: 213 HQVLQGNGHEHDFAGDNRVYIFDMFNYQIYPSDFVAKNAISRSV 256
>gi|347966468|ref|XP_321350.5| AGAP001736-PA [Anopheles gambiae str. PEST]
gi|333470046|gb|EAA00854.5| AGAP001736-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 163/248 (65%), Gaps = 7/248 (2%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFK--LPLIYSPDYDISFLGIEKLHPFDSS 59
+ SS S TD E K + KL ++PI + +P++Y P+Y + FLG++KLHPFD++
Sbjct: 11 ADQSSMSSGTD-EDDKEDEAAGGKLTAELPIGRDRIPIVYRPEYGVRFLGLQKLHPFDAA 69
Query: 60 KWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K G I + L + G + + + P E + E+LL VH++ Y+ SL+ S NV+ I E+PP+
Sbjct: 70 KGGNIYRLLKTNGLIQTDGDVYAPNEITLEELLAVHTQRYIDSLKWSLNVAKIAEIPPLL 129
Query: 119 LFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYAD 176
PNC VQR L P R Q GG++LAA+ A E GWAIN+GGGFHHCSAD GGGFC YAD
Sbjct: 130 FVPNCFVQRSYLRPMRYQTGGSLLAARAALESGLGWAINLGGGFHHCSADRGGGFCPYAD 189
Query: 177 ISLCIHY-AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR 235
I+L + I R++I+DLDAHQGNG+E+D D RV+ILDM+N IYPRD A+
Sbjct: 190 ITLAVKMLQSSGKGIERILIVDLDAHQGNGYERDLMEDRRVFILDMYNYRIYPRDQHAKL 249
Query: 236 FIDQKVEV 243
I + VE+
Sbjct: 250 AIRRAVEL 257
>gi|444717454|gb|ELW58284.1| Histone deacetylase 11 [Tupaia chinensis]
Length = 372
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL----- 102
+G+EKLHPFD+ KWG++ FL + L + +VE EAS+EDLLVVH+ YL L
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEDKLLSDSTLVEAREASEEDLLVVHTRRYLNELKPRPV 60
Query: 103 ------------------------------------------------QSSPNVSIIIEV 114
Q S V+ I E+
Sbjct: 61 HVQSPVQHVSHCTCAPMGWPASLPGCESWGEDEQGLGNPAGISYLFTKQWSFAVATITEI 120
Query: 115 PPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
PPV PN LVQRKVL P R Q GGTI+ KLA ERGWAINVGGGFHHCS+D GGGFCAY
Sbjct: 121 PPVIFLPNFLVQRKVLRPLRTQTGGTIMVGKLAVERGWAINVGGGFHHCSSDRGGGFCAY 180
Query: 175 ADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
ADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A
Sbjct: 181 ADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFA 240
Query: 234 RRFIDQKVEV 243
++ I +KVE+
Sbjct: 241 KQAIRRKVEL 250
>gi|312379378|gb|EFR25672.1| hypothetical protein AND_08794 [Anopheles darlingi]
Length = 354
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
+LP++Y +Y + F G++KLHPFD++K I + L + G + + V P E + ++LL
Sbjct: 37 RLPIVYRREYSVRFCGLQKLHPFDAAKGTNIYRLLKAGGLISPDSTVYTPPEVTLDELLD 96
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER-- 150
VH++ Y++SL+ S NV+ I E+PP+ PNC VQR L P R Q GGT+LAA++A +
Sbjct: 97 VHTKRYIESLKWSLNVAKIAEIPPLMFVPNCFVQRSYLRPMRYQTGGTLLAARIALQSGL 156
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV-QLNISRVMIIDLDAHQGNGHEKD 209
GWAIN+GGGFHHCSAD GGGFC YADI+L + I R++IIDLDAHQGNG+ +D
Sbjct: 157 GWAINLGGGFHHCSADRGGGFCPYADITLTVRMLLAGGTGIERILIIDLDAHQGNGYARD 216
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
D+ VYILDM+N IYPRD++A+ I + VE+
Sbjct: 217 LMGDASVYILDMYNYQIYPRDHQAKLAIGRAVEL 250
>gi|289742065|gb|ADD19780.1| putative histone deacetylase [Glossina morsitans morsitans]
Length = 359
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++YS Y + F +EKLHPFD+ K I + L+ ++ EPLE SKE+LL VH
Sbjct: 47 FPIVYSKQYGVHFGKLEKLHPFDAQKGKHIAKLLNEAKLIENWKFYEPLEISKEELLKVH 106
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ YL+SL S N + I E+P +A PNC VQ L P R Q G+ILA KLA + GWAI
Sbjct: 107 TPEYLRSLNWSINAAKISEIPLLAFVPNCFVQCGYLKPMRFQTAGSILAGKLALDHGWAI 166
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSD 213
N+GGGFHHC + GGGFCAYADI+L I F + + I ++MIIDLDAHQGNGHE+DF ++
Sbjct: 167 NLGGGFHHCCSYRGGGFCAYADITLLIQRTFAEESYIKKIMIIDLDAHQGNGHERDFLNN 226
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
S VYI+DM+N IYP+D A+ ID VE++
Sbjct: 227 SNVYIMDMYNVCIYPKDEPAKLAIDCGVELL 257
>gi|308478506|ref|XP_003101464.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
gi|308263110|gb|EFP07063.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
Length = 336
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 145/208 (69%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y +Y++S GIE LHPFD+SKW R+ +L + + +VEP + E+L+ VH
Sbjct: 18 PIVYHSEYNVSAFGIEHLHPFDTSKWRRVICYLKEMNLITDSTLVEPNLPTFEELVRVHD 77
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
YLKS+++ + I+E+P V P C+++ K+L+P R Q GG++LAA LA + GWAIN
Sbjct: 78 RKYLKSVRNPLKAAQIVEIPLVGCLPPCIIENKLLHPLRLQAGGSVLAANLALKYGWAIN 137
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHH S +GGGFC YADI++ I F + IS+ +++DLDAHQGNGH +DF+ +
Sbjct: 138 VGGGFHHASHSDGGGFCFYADITMAICDLFDKKAISQAIVVDLDAHQGNGHARDFADNKD 197
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEV 243
V++ D+FNP +YP D EAR+FI++ V V
Sbjct: 198 VFVFDVFNPNVYPHDREARQFINKAVHV 225
>gi|193207430|ref|NP_505699.3| Protein HDA-11 [Caenorhabditis elegans]
gi|157888565|emb|CAA94910.3| Protein HDA-11 [Caenorhabditis elegans]
Length = 334
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 147/224 (65%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
F + ++ P++Y +Y+++ GIE LHPFDSSKW R+ L + +VEP +
Sbjct: 10 FSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTF 69
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q GGT+LAA LA
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLA 129
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ GWAINVGGGFHH S GGGFC YADI++ I F + I+ +++DLDAHQGNGH
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQYTS 251
+DF+ + V++ D+FNP +YP D EAR+FI++ V V + TS
Sbjct: 190 RDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHVNGHTTDTS 233
>gi|195573625|ref|XP_002104792.1| GD18261 [Drosophila simulans]
gi|194200719|gb|EDX14295.1| GD18261 [Drosophila simulans]
Length = 343
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYILDM+N +YPRD+ A+ I VE+
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVEL 242
>gi|195331776|ref|XP_002032575.1| GM23455 [Drosophila sechellia]
gi|194121518|gb|EDW43561.1| GM23455 [Drosophila sechellia]
Length = 343
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYILDM+N +YPRD+ A+ I VE+
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVEL 242
>gi|403268333|ref|XP_003926231.1| PREDICTED: histone deacetylase 11 [Saimiri boliviensis boliviensis]
Length = 296
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 133/197 (67%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|344275965|ref|XP_003409781.1| PREDICTED: histone deacetylase 11-like [Loxodonta africana]
Length = 296
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 133/197 (67%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+E+LHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLERLHPFDAGKWGKVINFLKEEKLLSDSLLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|209862883|ref|NP_001129513.1| histone deacetylase 11 isoform 2 [Homo sapiens]
gi|194375634|dbj|BAG56762.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 133/197 (67%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|402859323|ref|XP_003894112.1| PREDICTED: histone deacetylase 11 isoform 2 [Papio anubis]
Length = 296
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 133/197 (67%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|195504646|ref|XP_002099168.1| GE10768 [Drosophila yakuba]
gi|194185269|gb|EDW98880.1| GE10768 [Drosophila yakuba]
Length = 343
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD+ EP E +K L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDEGSFYEPTELTKNQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA +LA + GWA
Sbjct: 91 HTRGYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGRLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPYRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYILDM+N +YPRD+ A+ I VE+
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVEL 242
>gi|410951796|ref|XP_003982579.1| PREDICTED: histone deacetylase 11 [Felis catus]
Length = 296
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 131/197 (66%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR I+DLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|345786364|ref|XP_541747.3| PREDICTED: histone deacetylase 11 [Canis lupus familiaris]
Length = 296
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 131/197 (66%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR I+DLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|195388622|ref|XP_002052978.1| GJ23587 [Drosophila virilis]
gi|194151064|gb|EDW66498.1| GJ23587 [Drosophila virilis]
Length = 326
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 146/213 (68%), Gaps = 4/213 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS +Y + F G+EKLHPFD++K I + L +E L+ +PLE +K +LL V
Sbjct: 11 KLPIVYSKNYSVRFAGLEKLHPFDAAKGKHIQRLLCAELSLECGDFYDPLEITKTELLRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTSKYLKSLKWSANVACIAEVPVLMFLPNFTVQSGYLRPMRYQTAGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV---MIIDLDAHQGNGHEKDF 210
IN+GGGFHHC + +GGGFC YADI+L + F +L SRV MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSYKGGGFCPYADITLLLVRLF-ELESSRVQNAMIVDLDAHQGNGHERDF 189
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ VYILDM+N +YP+D+EA+ I VE+
Sbjct: 190 KNIEAVYILDMYNAFVYPKDHEAKLSIRCGVEL 222
>gi|24649807|ref|NP_733048.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|386766464|ref|NP_001247296.1| histone deacetylase X, isoform B [Drosophila melanogaster]
gi|7301219|gb|AAF56350.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|227116367|gb|ACP19285.1| IP11169p [Drosophila melanogaster]
gi|383292938|gb|AFH06613.1| histone deacetylase X, isoform B [Drosophila melanogaster]
Length = 343
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYI DM+N +YPRD+ A+ I VE+
Sbjct: 211 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVEL 242
>gi|66772327|gb|AAY55475.1| IP10969p [Drosophila melanogaster]
Length = 328
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 16 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 75
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 76 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 135
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 136 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 195
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYI DM+N +YPRD+ A+ I VE+
Sbjct: 196 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVEL 227
>gi|66772255|gb|AAY55439.1| IP11069p [Drosophila melanogaster]
Length = 332
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 20 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 79
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 80 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 139
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 140 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 199
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYI DM+N +YPRD+ A+ I VE+
Sbjct: 200 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVEL 231
>gi|291393305|ref|XP_002713169.1| PREDICTED: histone deacetylase 11-like [Oryctolagus cuniculus]
Length = 296
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 132/197 (67%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLTDGMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAIN+GGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINIGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFDRVEGISRATIIDLDAHQGNGHERDFMEDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|195446307|ref|XP_002070720.1| GK10873 [Drosophila willistoni]
gi|194166805|gb|EDW81706.1| GK10873 [Drosophila willistoni]
Length = 342
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 142/217 (65%), Gaps = 2/217 (0%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
D+ KLP++YS Y + F G+EKLHPFD++K I + L +E L EP E +KE
Sbjct: 25 DVGSSKLPIVYSKKYAVRFAGLEKLHPFDAAKGKHIHKRLCAELLLGNGDFYEPKEVTKE 84
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
L +H+ YL SL+ S NV+ I EVP ++ PN VQ L P R Q G+ILA KLA
Sbjct: 85 QLRRIHTRKYLTSLECSMNVASIAEVPLLSFVPNTYVQSCYLRPMRFQTAGSILAGKLAL 144
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF--VQLNISRVMIIDLDAHQGNGH 206
E GW+IN+GGGFHHC +GGGFC YADIS+ + F + R+MI+DLDAHQGNGH
Sbjct: 145 EYGWSINLGGGFHHCCTSKGGGFCPYADISMLVVRLFELEPFRVQRIMIVDLDAHQGNGH 204
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
E+DF + + VYILDM+N IYP+D+EA+ I VE+
Sbjct: 205 ERDFHNVAAVYILDMYNASIYPKDHEAKTTIRCAVEL 241
>gi|195107762|ref|XP_001998477.1| GI23615 [Drosophila mojavensis]
gi|193915071|gb|EDW13938.1| GI23615 [Drosophila mojavensis]
Length = 323
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+EKLHPFD++K I Q L +E L+ PLE +KE+LL V
Sbjct: 11 KLPIVYSKKYAVRFGGLEKLHPFDAAKGKHIQQLLCAELSLECGDFYNPLEITKEELLRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL+ S V+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTPKYLRSLKWSAKVATIAEVPVLIFVPNVGVQSGYLRPMRYQTAGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAF--VQLNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + +GGGFC YADI+L + F L + MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSSKGGGFCPYADITLLLVRLFDLEPLRVRNAMIVDLDAHQGNGHERDFK 190
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
VYILDM+N IYP+D EA+ I VE+
Sbjct: 191 DTETVYILDMYNAYIYPKDNEAKLSIRCAVEL 222
>gi|198414517|ref|XP_002121327.1| PREDICTED: similar to histone deacetylase 11, partial [Ciona
intestinalis]
Length = 418
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 10/191 (5%)
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---------SPNVSIIIEV 114
I F++ + L N +PLE ++ DLL+ HS+ YL SL+ S NV+ I EV
Sbjct: 127 IVWFITDDKLLQNNQHFQPLEPTERDLLIAHSKEYLSSLKEKSVAGIRKWSANVARITEV 186
Query: 115 PPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
PPVAL PN +VQRKVL P R Q GG++LA KLA ERGWAIN+GGGFHHCS D GGGFCAY
Sbjct: 187 PPVALLPNFIVQRKVLLPLRLQTGGSVLAGKLAIERGWAINIGGGFHHCSGDRGGGFCAY 246
Query: 175 ADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
ADI+L I + F + + I RVM++DLDAHQGNG+ +DF D RV+++D++N IYP D A
Sbjct: 247 ADITLLIKFVFAKFDAIKRVMVVDLDAHQGNGYARDFMFDDRVFVMDVYNRNIYPHDGYA 306
Query: 234 RRFIDQKVEVV 244
+R I +KVE+
Sbjct: 307 KRGIKRKVELT 317
>gi|332816489|ref|XP_530587.3| PREDICTED: histone deacetylase 11 [Pan troglodytes]
Length = 308
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 140/222 (63%), Gaps = 40/222 (18%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK--------------------------------------- 84
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 85 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 144
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 145 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 186
>gi|254212167|gb|ACT65744.1| histone deacetylase family RPD3/HDA1 class III [Hordeum vulgare]
Length = 225
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
Q+++LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AF
Sbjct: 1 QQRLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAF 60
Query: 186 VQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
V+LNISRVMIIDLDAHQGNG+EKDF++D RVYILDM+N GIYP DY A+R+IDQK+E+V
Sbjct: 61 VRLNISRVMIIDLDAHQGNGYEKDFANDGRVYILDMYNAGIYPFDYAAKRYIDQKIELV 119
>gi|426250036|ref|XP_004018746.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 11 [Ovis aries]
Length = 646
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 134/195 (68%), Gaps = 7/195 (3%)
Query: 15 TLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL 74
+L R S++LY +P + P++YSP Y+I+FLG+E+LHPFD+ KWG++ FL E L
Sbjct: 238 SLLARRPHSTQLYQHVPDSRWPIVYSPRYNITFLGLERLHPFDAGKWGKVISFLKEEKLL 297
Query: 75 DKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFR 134
+ +VE LLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R
Sbjct: 298 SDSTLVE------AXLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 351
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRV 193
Q GGTI+A KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+
Sbjct: 352 TQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKA 411
Query: 194 MIIDLDAHQGNGHEK 208
I+DLDAHQ ++
Sbjct: 412 TIVDLDAHQVTAEQR 426
>gi|327266298|ref|XP_003217943.1| PREDICTED: histone deacetylase 11-like [Anolis carolinensis]
Length = 286
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 129/197 (65%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFDS KWG++ FL + + IV EA ++DLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDSGKWGKVINFLKEANLVTDDSIVRAQEAREDDLLVVHTRQYLNRLK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAIN+GGGFHHCS D
Sbjct: 57 -------------------RKVLRPLRIQTGGTIMAGKLAIERGWAINIGGGFHHCSGDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ +SR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLTIKFLFERMEGVSRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRYI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A+R I +KVE+
Sbjct: 158 YPGDGFAKRAISRKVEL 174
>gi|195039143|ref|XP_001990869.1| GH18019 [Drosophila grimshawi]
gi|193895065|gb|EDV93931.1| GH18019 [Drosophila grimshawi]
Length = 325
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 142/213 (66%), Gaps = 4/213 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS +Y + F G+EKLHPFD++K I + L E L+ +P+E +KE L V
Sbjct: 11 KLPIVYSKNYSVRFAGLEKLHPFDAAKGKHIQELLCDELSLNAGQFYDPVEITKEQLRRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S V+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTRKYLKSLKWSAKVACIAEVPVMIFMPNFTVQSGYLRPMRYQASGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV---MIIDLDAHQGNGHEKDF 210
IN+GGGFHHC +++GGGFC YADI+L + F L +RV MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSNKGGGFCPYADITLLLVRLF-DLEPTRVRNAMIVDLDAHQGNGHERDF 189
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ VYILDM+N +YP D+EA+ I VE+
Sbjct: 190 MNTDSVYILDMYNAFVYPMDHEAKLSIRCGVEL 222
>gi|397511879|ref|XP_003826290.1| PREDICTED: histone deacetylase 11 isoform 2 [Pan paniscus]
Length = 297
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 132/198 (66%), Gaps = 25/198 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT-ILAAKLAKERGWAINVGGGFHHCSAD 166
RKVL P R Q GGT LA KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTHKLAGKLAVERGWAINVGGGFHHCSSD 97
Query: 167 EGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N
Sbjct: 98 RGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRH 157
Query: 226 IYPRDYEARRFIDQKVEV 243
IYP D A++ I +KVE+
Sbjct: 158 IYPGDRFAKQAIRRKVEL 175
>gi|157106851|ref|XP_001649512.1| histone deacetylase [Aedes aegypti]
gi|108879745|gb|EAT43970.1| AAEL004639-PA [Aedes aegypti]
Length = 358
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 147/216 (68%), Gaps = 6/216 (2%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
KLP++Y P+Y + F G+++LHPFD++K G I + L + + + V P E S ++LL
Sbjct: 39 KLPIVYRPEYGVEFCGLQRLHPFDAAKGGNIYRLLKAGKLISSDSDVHRPREISTDELLD 98
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--- 149
VH++ Y++SL+ S NV+ I E+PP+ PN VQR L P R Q G+ILAA+ A +
Sbjct: 99 VHTKRYIESLKWSINVAKIAEIPPLIFVPNYFVQRSYLRPMRYQTFGSILAARCALDGSC 158
Query: 150 -RGWAINVGGGFHHCSADEGGGFCAYADISLCIHY-AFVQLNISRVMIIDLDAHQGNGHE 207
GWAIN+GGGFHHCSAD+GGGFC YADI+L + I R+MI+DLDAHQGNG+
Sbjct: 159 GTGWAINLGGGFHHCSADDGGGFCPYADITLIVRMLQSSGKGIERIMIVDLDAHQGNGYA 218
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+D DS V+I+DM+N IYPRD+EA+ I + VE+
Sbjct: 219 RDLMDDSGVFIMDMYNYRIYPRDHEAKLAIKRAVEL 254
>gi|218780702|ref|YP_002432020.1| histone deacetylase superfamily protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762086|gb|ACL04552.1| Putative sirtuin-type regulators for CoA ligase (histone
deacetylase superfamily) [Desulfatibacillum alkenivorans
AK-01]
Length = 355
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 139/220 (63%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
D P LP++YS Y+I+ GI+KLHPFDS K+GR+ ++L L I EP E S+
Sbjct: 26 DEPEIPLPIVYSKHYNITLFGIQKLHPFDSEKYGRVYKYLEKNVGLSPERIFEPEEISEL 85
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DLL VHS YL SL+ S V+ I E+ + L P L+ +K+L P R GGT+LA +LA
Sbjct: 86 DLLRVHSREYLDSLKKSSVVAEIAEMGALKLMPGFLLDKKILKPMRYATGGTVLACRLAL 145
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ GW++N+ GG+HH AD+G GFC YADI + H + Q ++M++DLD HQGNGHE
Sbjct: 146 QYGWSVNLSGGYHHAKADQGEGFCFYADIPVAAHVLWEQNPAMKIMVVDLDVHQGNGHEA 205
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
F D RV+I DM+N IYPRD EA +ID + V +
Sbjct: 206 VFKDDPRVFIFDMYNAEIYPRDKEAAEYIDFNLPVAYGTE 245
>gi|119584565|gb|EAW64161.1| histone deacetylase 11, isoform CRA_e [Homo sapiens]
Length = 190
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 120/159 (75%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI 162
>gi|194742864|ref|XP_001953920.1| GF18009 [Drosophila ananassae]
gi|190626957|gb|EDV42481.1| GF18009 [Drosophila ananassae]
Length = 341
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 4/212 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+E+LHPFD++K I + L +E L+ E L +K+ L +
Sbjct: 31 KLPIVYSKKYAVRFAGLERLHPFDAAKGKHIQKILCTELNLNDGSFYESL--TKDQLRRI 88
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL S NV+ I EVP +A PN +Q L P R Q G+ILA KLA + GWA
Sbjct: 89 HTRDYLRSLDWSMNVACIAEVPVMAFVPNRFIQSSYLRPMRFQAAGSILAGKLALDYGWA 148
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 149 INLGGGFHHCCSYRGGGFCPYADISLLIIRLFEQEPFRVRRIMIVDLDAHQGNGHERDFT 208
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYILDM+N +YP+D+ A++ I VE+
Sbjct: 209 NVAAVYILDMYNAFVYPKDHAAKQSIRCAVEL 240
>gi|344241605|gb|EGV97708.1| Histone deacetylase 11 [Cricetulus griseus]
Length = 301
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 119/159 (74%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 3 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 63 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 123 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI 161
>gi|355694227|gb|AER99599.1| Histone deacetylase 11 [Mustela putorius furo]
Length = 185
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/159 (63%), Positives = 120/159 (75%), Gaps = 1/159 (0%)
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
S EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A K
Sbjct: 1 SDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIMAGK 60
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGN 204
LA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAHQGN
Sbjct: 61 LAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGN 120
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
GHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 121 GHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 159
>gi|354465542|ref|XP_003495238.1| PREDICTED: histone deacetylase 11-like [Cricetulus griseus]
Length = 443
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 119/159 (74%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 143 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 202
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 203 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 262
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 263 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI 301
>gi|119584561|gb|EAW64157.1| histone deacetylase 11, isoform CRA_a [Homo sapiens]
Length = 165
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
GGGFCAYADI+L I + F ++ ISR IIDLDAHQ
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQ 156
>gi|195158946|ref|XP_002020344.1| GL13561 [Drosophila persimilis]
gi|198449329|ref|XP_001357545.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
gi|194117113|gb|EDW39156.1| GL13561 [Drosophila persimilis]
gi|198130558|gb|EAL26679.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
Length = 331
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+E+LHPF+++K I + L +E L + EP E +K L +
Sbjct: 19 KLPIVYSKSYAVRFHGLERLHPFNAAKGKHIHKALCAELSLVEGSFYEPEELTKHQLRRI 78
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL+ S NV+ I EV +A PN +Q+ L P R Q G+ILA KLA + GWA
Sbjct: 79 HTREYLRSLRWSLNVARIAEVSLMAFVPNKYLQQAYLRPMRFQAAGSILAGKLALDYGWA 138
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC ++ GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 139 INLGGGFHHCCSNRGGGFCPYADISLLIVRLFEQEPCRVRRIMIVDLDAHQGNGHERDFN 198
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ V+ILD++N IYPRD+ A+ I VE+
Sbjct: 199 NWETVFILDIYNAFIYPRDHAAKLSIRCGVEL 230
>gi|194909322|ref|XP_001981923.1| GG12313 [Drosophila erecta]
gi|190656561|gb|EDV53793.1| GG12313 [Drosophila erecta]
Length = 332
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 139/212 (65%), Gaps = 13/212 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L SE LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCSELQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP R L P R Q G+ILA +LA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVP-----------RSYLRPMRFQAAGSILAGRLALDYGWA 139
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 140 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 199
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ + VYILDM+N +YPRD+ A+ I VE+
Sbjct: 200 NVAAVYILDMYNAFVYPRDHVAKESIRCAVEL 231
>gi|335299481|ref|XP_003132448.2| PREDICTED: histone deacetylase 11-like [Sus scrofa]
Length = 296
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 129/197 (65%), Gaps = 24/197 (12%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V + P + GG+ILA KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 VQGLGAASP-------------------EKGGSILAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEV 243
YP D A++ I +KVE+
Sbjct: 158 YPGDRFAKQAIRRKVEL 174
>gi|268558276|ref|XP_002637128.1| Hypothetical protein CBG09630 [Caenorhabditis briggsae]
Length = 326
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y +Y++S GIE LHPFDSSKW R+ L + VEP + E+L VH
Sbjct: 18 PIVYHSEYNVSAFGIEHLHPFDSSKWKRVIAHLKDMNLITDATTVEPSLPTFEELTRVHD 77
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
YLKS+++ + I+E+P V P C+++ GG++LAA LA + GWAIN
Sbjct: 78 RKYLKSVRNPLKAAQIVEIPLVGCLPPCVIE----------TGGSVLAANLALKHGWAIN 127
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHH S +GGGFC YADI++ I F + I+ +++D+DAHQGNGH +DF+++
Sbjct: 128 VGGGFHHASYSDGGGFCFYADITMAICDLFDKKAITNAIVVDVDAHQGNGHARDFANNEN 187
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQYTS 251
V++ D+FNP +YP D EAR+FI++ V V + TS
Sbjct: 188 VFVFDVFNPYVYPHDREARQFINKAVHVNSHTTDTS 223
>gi|170030566|ref|XP_001843159.1| histone deacetylase 11 [Culex quinquefasciatus]
gi|167867835|gb|EDS31218.1| histone deacetylase 11 [Culex quinquefasciatus]
Length = 350
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
KLP++Y +Y + F G+++LHPFD++K G I + L + + + V +P E + +LL
Sbjct: 29 KLPIVYRKEYGVRFCGLQRLHPFDAAKGGNIFRLLKAGHLIHSDDEVHQPKEITTAELLD 88
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--- 149
VH++ Y+ SL+ S NV+ I E+PP+ PN VQR L P R Q G++LAAK A E
Sbjct: 89 VHTKRYIGSLKWSLNVAKIAEIPPLLFVPNYFVQRSYLRPMRFQTAGSLLAAKRALESTT 148
Query: 150 -RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ-LNISRVMIIDLDAHQGNGHE 207
WAIN+GGGFHHCSAD GGGFC YADI+L + I R+MI+DLDAHQGNG+
Sbjct: 149 GHQWAINLGGGFHHCSADRGGGFCPYADITLTVRMLLGSGRGIERIMIVDLDAHQGNGYA 208
Query: 208 KDFSSD--SRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+D + V+I+DM+N IYPRD EA+ I + VE+
Sbjct: 209 RDLLEERGRTVFIMDMYNYRIYPRDQEAKLAISRAVEL 246
>gi|340381672|ref|XP_003389345.1| PREDICTED: histone deacetylase 11-like, partial [Amphimedon
queenslandica]
Length = 252
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
SS NV++++EVPP+A+ PN +VQ K+L PFR Q GGTILA KLA ERGWAIN+GGGFHHC
Sbjct: 1 SSTNVAMVVEVPPLAIVPNYIVQNKMLRPFRYQTGGTILAGKLAMERGWAINIGGGFHHC 60
Query: 164 SADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
+ EGGGFCAYADI+L I + F ++ + +VMI+D DAHQGNGHE+DF D +VYI+DM+
Sbjct: 61 CSGEGGGFCAYADITLSIRFLFQRVPGVQKVMIVDFDAHQGNGHERDFMDDDKVYIMDMY 120
Query: 223 NPGIYPRDYEARRFIDQKVEVVVN 246
N IYP D +A+ I+ K+E+ V+
Sbjct: 121 NRWIYPNDIKAKSAINMKIELDVH 144
>gi|307106657|gb|EFN54902.1| hypothetical protein CHLNCDRAFT_23994, partial [Chlorella
variabilis]
Length = 326
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 135/219 (61%), Gaps = 10/219 (4%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YSP Y+ISF G+E+LHPFDS K+ + L G L +V EA+ E L VH+
Sbjct: 1 PVLYSPAYNISFYGVERLHPFDSKKFQHVLSILERGGVLQVGQLVRAHEATHEILQEVHT 60
Query: 96 ESYLKSLQSSPNV-----SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
E+YL L +S + + E+ P+A P L++RKVL P GGT++AA LA ER
Sbjct: 61 EAYLNKLNTSSFMVAQASRWVTELVPLAFLPPFLLRRKVLRPMATMAGGTMMAAALAMER 120
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIH--YAFVQLNISRVMIIDLDAHQGNGHEK 208
GWAIN+GGG HH S D+GGG+C YADI L + A + RVM++DLD HQGNG E+
Sbjct: 121 GWAINLGGGMHHASHDQGGGWCPYADIHLAMRRLRAASGGGVRRVMVVDLDVHQGNGVER 180
Query: 209 ---DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
F + +I+D++N YP D EA++ ID + E++
Sbjct: 181 CKQHFGEEGETFIVDVYNRRAYPWDAEAKQAIDVQRELL 219
>gi|320164043|gb|EFW40942.1| histone deacetylase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 372
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 139/224 (62%), Gaps = 9/224 (4%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKL---HPFDSSKWGRICQFLSS----EGFLDKNCIV 80
F +P LP+ YS Y++ F GIEK+ HPFD++K+ + + L + F +
Sbjct: 78 FQLPAAMLPVFYSEAYNMGFGGIEKVLSPHPFDATKYRGVFKHLRAGPLASAFAPARIMA 137
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
P AS +DLL+ HSE YL+SL+SS V+ I EV +A+ P +V ++ P R GT
Sbjct: 138 PPAVASDQDLLIAHSEEYLRSLKSSTTVAHIAEVITLAVLPIFMVNYGIVTPQRTMTSGT 197
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDA 200
AAK A + GWAINVGGGFHH S +EGGGFC +ADIS I ++ + R MI+DLDA
Sbjct: 198 AFAAKAAMQAGWAINVGGGFHHASCNEGGGFCIFADISFAIKL-LMREGLQRAMIVDLDA 256
Query: 201 HQGNGHEKDFSSDS-RVYILDMFNPGIYPRDYEARRFIDQKVEV 243
HQGNGHE DF+ D RVYILD++N IYP D +A+ + V V
Sbjct: 257 HQGNGHENDFAQDKDRVYILDVYNRDIYPGDRKAKSGMSLNVPV 300
>gi|159478703|ref|XP_001697440.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158274319|gb|EDP00102.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 311
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF-LDKNCIVEPLEASKEDLLVVHSESYL 99
P Y+ISF GIEKLHPFD+ K+ ++ + L +G L +V P EA+ E L VH+ YL
Sbjct: 1 PQYNISFFGIEKLHPFDAGKFAKVVKALKRDGVVLGDAQLVTPREATPEMLSDVHTADYL 60
Query: 100 KSLQSSP-NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGG 158
+ + V + E+ +A+ PN L+Q +V+ P R VGGT+LA LA ERGWA+N+GG
Sbjct: 61 HRIHNHNFTVVQVTELAALAMLPNKLLQWRVVAPMRMHVGGTMLALGLALERGWAVNIGG 120
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNIS--RVMIIDLDAHQGNGHEKDFSSDSRV 216
G HH SAD G G+C + DI L A +V++IDLDAHQGNG E+ D ++
Sbjct: 121 GMHHASADRGMGWCPFDDIMLGAAAAGDGAGAGGLKVLVIDLDAHQGNGVERLALGDGQL 180
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEV 243
YILDM+N G++PRD EA+ ID +VE+
Sbjct: 181 YILDMYNAGVFPRDDEAKAGIDIRVEL 207
>gi|384248980|gb|EIE22463.1| hypothetical protein COCSUDRAFT_16559 [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+ Y+ Y+I FLG+E+ HPFDS K+G++ L + G L+ + +V+P EA+++ L V
Sbjct: 41 KLPIAYADAYNIGFLGLERFHPFDSRKFGKVVNNLDASGILNPDQLVQPPEATQQVLRDV 100
Query: 94 HSESYLKSLQ-SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
HSE YL S+ SS ++ I E+ + PN +VQ ++ P R VGGT+LA +A E GW
Sbjct: 101 HSEEYLLSINTSSSKMAEITEIAAIGFLPNSVVQHRLNRPMRIHVGGTMLAVGMAMEWGW 160
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN--ISRVMIIDLDAHQGNGHEKD- 209
AIN+GGG HH S D GGG+C Y D +L + + + + M+IDLD HQGNGH +
Sbjct: 161 AINLGGGMHHASVDNGGGWCVYDDWTLALRKLRRETGNVVQKAMLIDLDVHQGNGHARTK 220
Query: 210 -FSSDSRVYILDMFNPGIYPRDYEARRFID 238
D +YILD++N ++P D A+ I+
Sbjct: 221 LHFGDKDLYILDLYNADLWPWDTTAKAAIN 250
>gi|312091972|ref|XP_003147172.1| histone deacetylase 11 [Loa loa]
Length = 317
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 119/211 (56%), Gaps = 42/211 (19%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-- 137
+ P EAS +DL VVHS +YL SL+ V+ ++E+ PVAL P C++ + +L P R
Sbjct: 8 IRPSEASMDDLRVVHSSTYLSSLRCPCYVAKMVEITPVALLPPCIINKVLLKPLRYHTDK 67
Query: 138 ----------------------------------------GGTILAAKLAKERGWAINVG 157
GGT+LAAKLA GWAIN+G
Sbjct: 68 LRTDCVKCIGAYSLKSALCCNAALFEVAQVDKCIFLSSFEGGTVLAAKLALTSGWAINIG 127
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GGFHH S +GGGFC YADI+L + + F IS+ +I+DLDAHQGNGHE DFS DSRVY
Sbjct: 128 GGFHHASRSKGGGFCIYADITLALTFLFSSQLISKAVIVDLDAHQGNGHENDFSGDSRVY 187
Query: 218 ILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
ILDMFN IYP D ARR I + V + V Q
Sbjct: 188 ILDMFNSRIYPYDLRARRAIKRSVHLHVGTQ 218
>gi|302837171|ref|XP_002950145.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
gi|300264618|gb|EFJ48813.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
Length = 428
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 9/212 (4%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP++Y P Y+ISF G+EKLHPFDS K+G++ L + L + V+P EAS E L V
Sbjct: 54 QLPVVYHPSYNISFFGVEKLHPFDSCKYGKVMSALKKQHVLREGQTVQPREASLEVLADV 113
Query: 94 HSESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
H++ YL + N +I+ E+ ++L PN L+Q +++ P + VGGT+LA LA ERG
Sbjct: 114 HTQDYLYRIHYH-NFTIVQVTELAALSLLPNKLLQWRIVAPMKLHVGGTMLATGLALERG 172
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
WAIN+GGG HH S+ G G+C + DI L + V+ IDLDAHQGNG E+DF
Sbjct: 173 WAINIGGGMHHASSSRGMGWCPFDDIVLAVRRVRKAAGRLVVLYIDLDAHQGNGVERDF- 231
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
YI+D +N I+P D EA+ ID VE+
Sbjct: 232 -----YIIDFYNARIFPLDDEAKPAIDIPVEL 258
>gi|341892614|gb|EGT48549.1| CBN-HDAC-11 protein [Caenorhabditis brenneri]
gi|341899537|gb|EGT55472.1| hypothetical protein CAEBREN_32506 [Caenorhabditis brenneri]
Length = 284
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 120/173 (69%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VEP + E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q G
Sbjct: 9 LVEPNLPTFEELSRVHDRKYLKSVRNPLKAAQIVEIPLVGCLPPCIIETKLLHPLRLQAG 68
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
G++LAA LA + GWAINVGGGFHH S +GGGFC YADI++ I F + I+ +++D+
Sbjct: 69 GSVLAANLALKHGWAINVGGGFHHASHSDGGGFCFYADITMAILDLFDKKAITNAIVVDV 128
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQYTS 251
DAHQGNGH +DF+++ V++ D+FNP +YP D EAR+FI++ V V + TS
Sbjct: 129 DAHQGNGHARDFANNPNVFVFDVFNPYVYPHDREARQFINKAVHVNGHTTDTS 181
>gi|357614603|gb|EHJ69167.1| putative histone deacetylase 11-like protein [Danaus plexippus]
Length = 242
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 98/134 (73%)
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+I EVP +A PN LVQ+ L P R Q GGTILA KLA ERGWAIN+GGGFHHCSA +GG
Sbjct: 1 MIAEVPVIACVPNFLVQKAYLKPMRLQTGGTILAGKLALERGWAINIGGGFHHCSAGKGG 60
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFCAYADI+L I + + MI+DLDAHQGNG++ DF VYI+DM+N IYPR
Sbjct: 61 GFCAYADITLLIKNLVLHRGVQNTMIVDLDAHQGNGYQHDFLGIPEVYIMDMYNRHIYPR 120
Query: 230 DYEARRFIDQKVEV 243
D EA+R I +K+E+
Sbjct: 121 DEEAKRAIRRKIEL 134
>gi|403332831|gb|EJY65466.1| Histone deacetylase 11 [Oxytricha trifallax]
Length = 381
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL-DKNCIVEPLEASKEDLLVV 93
P++YSP Y+I+ G+EK+HPFDS K+ R+ + L + + D+ I P ++E LL
Sbjct: 68 FPIVYSPKYNITAFGLEKIHPFDSCKYQRVFESLRKKKVINDQTQIHSPSIPTREFLLEK 127
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
S YL LQ S + +EVP + P+ ++ +VL P + G++ A+ +A ++GWA
Sbjct: 128 MSAWYLFKLQYSIYICKCLEVP-LFFLPSWFLRFRVLNPMLRATQGSVDASCIALQQGWA 186
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN+ GG+HH S GGGFC Y DI+ +H I+RVMIIDLDAHQGNGHE+DF D
Sbjct: 187 INLAGGYHHASCTCGGGFCIYPDITFIVHNVKKYHGINRVMIIDLDAHQGNGHERDFLRD 246
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
V+I+D +NP IYP D A I ++ +
Sbjct: 247 PDVHIVDAYNPNIYPGDDFAETAIKTRIPIT 277
>gi|443475316|ref|ZP_21065269.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
gi|443019838|gb|ELS33872.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
Length = 326
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK---NCIVEPLEA 85
D I + ++YSP+YDI FLG+EKLHPFDS K+GR + L+ F D+ N + A
Sbjct: 6 DSIIIRPKVVYSPNYDIKFLGLEKLHPFDSCKYGRAWRVLADR-FGDRLIANSLAPVAPA 64
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
E L +VH+ YLK+LQ S V+ +E+ + P ++ +VL P R GT++A++
Sbjct: 65 PTEILQLVHTTDYLKNLQRSHFVAQSLEMDSLGFLPIGILDSRVLQPMRLATMGTVMASE 124
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQ 202
A E G AIN+ GG+HH SA+ G GFC Y+DI++ I I+ RV IIDLDAHQ
Sbjct: 125 AALEFGVAINLSGGYHHASAERGEGFCIYSDIAIAISLLRQSQKINAEDRVAIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
GNG + F D ++ILDM+N IYP D A+ +D + ++
Sbjct: 185 GNGLARIFYEDPSIHILDMYNQQIYPNDTYAKERVDWAIPLL 226
>gi|217072904|gb|ACJ84812.1| unknown [Medicago truncatula]
Length = 201
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 85/92 (92%)
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
INVGGGFHHCSA+ GGGFCAYADISLCIH+AFVQLNISRV+IIDLDAHQGNGHE DF+
Sbjct: 1 MGINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFA 60
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
D+RVYILDM+NPGIYP D+EAR +I+QKV+V
Sbjct: 61 DDNRVYILDMYNPGIYPLDHEARSYINQKVDV 92
>gi|145509340|ref|XP_001440611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407834|emb|CAK73214.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 132/210 (62%), Gaps = 13/210 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWG----RICQFLSSEGFLDKNCIVEPLEASKED 89
++P++Y +Y+I+ GIEK HPFDS K+G +I Q + ++ F P S+
Sbjct: 65 EIPIVYHENYNITACGIEKWHPFDSCKYGNVYRQIRQKVKAQHF-------TPSMLSRGT 117
Query: 90 LLVV-HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
LL + S YL + S VS +IE+P V P ++ +L P G+I AAKLA
Sbjct: 118 LLYLGMSRWYLLKMCYSAYVSTLIELP-VFFLPGAFLRSSLLDPMLLATSGSIYAAKLAI 176
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+GWAIN+ GG+HH S + GGGFC Y DI+L ++Y N+++++I+DLDAHQGNG+E+
Sbjct: 177 EKGWAINLSGGYHHASLNGGGGFCIYPDITLVVNYLKKCQNLNKIVIVDLDAHQGNGYER 236
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFID 238
DF DS VYI+D +N IYP D+EA + I+
Sbjct: 237 DFLQDSSVYIIDFYNSYIYPGDHEAEQAIN 266
>gi|149174347|ref|ZP_01852974.1| deacetylase [Planctomyces maris DSM 8797]
gi|148846892|gb|EDL61228.1| deacetylase [Planctomyces maris DSM 8797]
Length = 319
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 131/220 (59%), Gaps = 8/220 (3%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE-GFLDKNCIVEPLEA-SKEDLLVVH 94
++YSP Y+I F G+E+LHPFDS K+GR + L + G + V P A S+E+LL+VH
Sbjct: 4 IVYSPKYNIGFYGLERLHPFDSRKYGRAWKQLRARFGKSLRQIHVSPERAVSREELLLVH 63
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E YLK L +S V+ +E+ P+ P ++ VL P R GTI+AA+ + E G AI
Sbjct: 64 TEGYLKQLSNSMYVAQALELAPLQFLPFWIIDHHVLRPMRWATRGTIVAAQESLEHGLAI 123
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKDFS 211
N+ GG+HH +G GFC YAD ++ + Q IS R++ +D DAHQGNG F
Sbjct: 124 NLSGGYHHSKPAQGEGFCVYADAAIAVATLRQQALISETDRIVYVDTDAHQGNGVSHAFM 183
Query: 212 SDSRVYILDMFNPGIYPR-DYEARRFIDQKVEVVVNNQYT 250
+D+R ++ D+FN YP+ D AR +D E+ + +T
Sbjct: 184 NDNRAFLFDIFNARAYPQNDVAARERLD--CEIGITGSWT 221
>gi|168699615|ref|ZP_02731892.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Gemmata obscuriglobus UQM 2246]
Length = 324
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
+ LIY+ Y+I FLG+E+LHPFDS K+GR + + S G L D+ + P S +L V
Sbjct: 1 MKLIYTRRYNIGFLGLERLHPFDSRKYGRAWRAIGSVGRLLRDRALVGVPRPVSVAELSV 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SYL L ++ ++E+P + P V R VL P R V G+++AA+ A G
Sbjct: 61 THDPSYLARLGDPRELAWVLELPFLRRLPAWAVWRAVLRPMRWAVAGSLVAAREALTHGL 120
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKD 209
A+N+ GG+HH + G GFC + DI+ +H ++ RV+ +DLDAHQGNG
Sbjct: 121 ALNLSGGYHHARPNGGEGFCVFNDIAHLVHGLRTAGRLAPDDRVVYVDLDAHQGNGVCHH 180
Query: 210 FSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEV 243
F SD RV++ D FNP IYP D EARR ID V +
Sbjct: 181 FRSDPRVFLYDAFNPHIYPAHDQEARRRIDCAVPL 215
>gi|145497186|ref|XP_001434582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401709|emb|CAK67185.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++Y Y+I+ GIEK HPFDS K+G + + + + K P S+ L +
Sbjct: 65 EIPIVYDESYNITACGIEKWHPFDSCKYGNVYRQIRQQ---VKGSHFTPKMLSRGTFLYL 121
Query: 94 -HSESYLKSLQSSPNVSIIIEVP----PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
S+ YL + S S +IE+P P A +CL+ +L G+I AAKLA
Sbjct: 122 GMSKWYLLKMCYSAYASTLIELPVFFLPGAFLRSCLLDSMLL-----ATSGSIQAAKLAL 176
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+GWAIN+ GG+HH S + GGGFC Y DI+L ++Y N+ +++I+DLDAHQGNG+E+
Sbjct: 177 EKGWAINLSGGYHHASLNRGGGFCIYPDITLVVNYLKRCCNLKKIVIVDLDAHQGNGYER 236
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFI 237
DF +DS VYI+D +N IYP D+ A + I
Sbjct: 237 DFLNDSSVYIIDFYNSYIYPGDHIAEQAI 265
>gi|168701002|ref|ZP_02733279.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Gemmata obscuriglobus UQM 2246]
Length = 384
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE--GFLDKNCIVEPLEASKEDLLV 92
+ L+Y+ Y+I FLG+E+LHPFDS K+GR + E ++ + P AS DL
Sbjct: 1 MKLVYTRRYNIGFLGLERLHPFDSRKYGRAWNAVGREERRLRNRAWMGVPRPASFADLSA 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH +YL L+ S ++ +E+P + P V+ VL P R V G+++A + A G
Sbjct: 61 VHDPAYLDRLRDSKVLASALELPFIRRLPAWAVRWTVLRPMRWAVAGSLVAGRAALTDGL 120
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKD 209
++N+ GG+HH D G GFC + D++ IH + ++ RV I LDAHQGNG
Sbjct: 121 SVNLSGGYHHAKPDRGEGFCVFNDVAYLIHRLRTEGRLAADGRVAYIGLDAHQGNGVSLH 180
Query: 210 FSSDSRVYILDMFNPGIYPR-DYEARRFIDQKVEVVVN 246
F SD+RV + D +NP IYP D+ AR ID V + N
Sbjct: 181 FRSDTRVLMYDAYNPRIYPSYDHGARARIDCPVPLPAN 218
>gi|326520441|dbj|BAK07479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/83 (84%), Positives = 78/83 (93%)
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
VGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AFV+LNISRVMII
Sbjct: 1 VGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAFVRLNISRVMII 60
Query: 197 DLDAHQGNGHEKDFSSDSRVYIL 219
DLDAHQGNG+EKDF++D YIL
Sbjct: 61 DLDAHQGNGYEKDFANDGMSYIL 83
>gi|10437935|dbj|BAB15127.1| unnamed protein product [Homo sapiens]
gi|48146799|emb|CAG33622.1| HDAC11 [Homo sapiens]
Length = 225
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 1 MAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 60
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 61 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 103
>gi|119584566|gb|EAW64162.1| histone deacetylase 11, isoform CRA_f [Homo sapiens]
Length = 113
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 1 MAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 60
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 61 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 103
>gi|119584570|gb|EAW64166.1| histone deacetylase 11, isoform CRA_j [Homo sapiens]
Length = 264
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 85/121 (70%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 A 143
Sbjct: 124 G 124
>gi|83647787|ref|YP_436222.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83635830|gb|ABC31797.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 318
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-----IVEPLEASK 87
K L YSP YD G+ LHPFD+SK+ R L E F +K I +P A+
Sbjct: 1 MKTLLAYSPHYDFRLPGLAALHPFDASKYSRAWSVLR-EHFGEKLADITLQINDP--ATT 57
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-KL 146
E L + HS YL SL S +S ++E + P+ L+Q+ +L P + V GTI AA K
Sbjct: 58 ESLALAHSREYLASLSHSAAISRVVENSLLKWLPSSLLQKGLLTPAKYAVAGTITAAHKA 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQG 203
+E N+GGGFHH D G GFC ++D +L I + + V++IDLDAH+G
Sbjct: 118 IEEEAIVFNLGGGFHHAFRDHGEGFCFFSDAALAIQLLRAEKRLGSADEVLMIDLDAHRG 177
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYP 228
NG E +SD V+ DM+N YP
Sbjct: 178 NGFESYIASDPMVHNFDMYNFQAYP 202
>gi|52545875|emb|CAH56375.1| hypothetical protein [Homo sapiens]
gi|119584562|gb|EAW64158.1| histone deacetylase 11, isoform CRA_b [Homo sapiens]
Length = 236
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 66/96 (68%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMG 96
>gi|374584482|ref|ZP_09657574.1| histone deacetylase superfamily [Leptonema illini DSM 21528]
gi|373873343|gb|EHQ05337.1| histone deacetylase superfamily [Leptonema illini DSM 21528]
Length = 313
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P+F IYSP Y++ + H F + K+ I L + ++ EP+ AS +D
Sbjct: 20 LPVF----IYSPGYNLQL----EAHVFPAVKFSLIYSKLKEDPAFAQHRFFEPMPASFDD 71
Query: 90 LLVVHSESYLKSLQSSPNVSIII---EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
VH + YL+ LQ+ N S + E+P + + ++ F GGTI+AA++
Sbjct: 72 AATVHKKDYLQDLQT-LNFSRRVYRSELP---------LTKSIVDAFFLGTGGTIMAAEM 121
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GGFHH AD GFC D+++ + Q I R +IIDLD HQGNG
Sbjct: 122 ALDYGRAMNLSGGFHHAFADHAEGFCYLNDVAIAVRVLQKQKRIKRALIIDLDVHQGNGT 181
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
K F V+ M YP
Sbjct: 182 AKIFRHSRHVFTFSMHEEKNYP 203
>gi|440792258|gb|ELR13486.1| oxidoreductase, aldo/keto reductase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 719
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 20/183 (10%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPF-----DSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
K P++YS DYD ++ G+E+L P D G + Q L +G + + + P +KE
Sbjct: 435 KRPVVYSDDYDQNWWGLERLLPLPLTLQDRKYHGELAQGLVEKGVIKADQFIMPEVPTKE 494
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DL +++ YL SL S ++ + P + FP+ ++ V + VGGT+LA+++A
Sbjct: 495 DLKEYNTQEYLTSLNQSRRLAEALGNPTLRYFPSLVIHTFVSGFMLEAVGGTVLASRVAL 554
Query: 149 ERGWAINVGGGFHHCSA---DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
ERGWAIN+GGGFHH SA +G GF AD L V ++D Q NG
Sbjct: 555 ERGWAINLGGGFHHASASSGSQGDGFV--ADFGLD----------ENVYLVDSHTDQPNG 602
Query: 206 HEK 208
H++
Sbjct: 603 HKR 605
>gi|373456320|ref|ZP_09548087.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371717984|gb|EHO39755.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 311
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++YS DY + FD ++ +I L E L + I+ P E+L +VH++
Sbjct: 14 VVYSSDYIYGLPSVGDHQTFDIMRFKKIRDKLVEEKLLTRKNILRPYLCKYEELRLVHTD 73
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWAIN 155
YL+ LQ+ VS I+++ V LF +++ +R GGT+LA A K N
Sbjct: 74 EYLRKLQNPQYVSNILKLDAVNLFYESILEY-----YRAVTGGTLLATAYALKNNVPTFN 128
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDS 214
+GGG+HH D+ GFC DI++ I F QL R M+IDLD HQGNG F D+
Sbjct: 129 LGGGYHHAHPDKAEGFCLVNDIAIAIE-KFRQLQRAKRFMVIDLDYHQGNGTLLYFKDDA 187
Query: 215 RVYILDM 221
V+ M
Sbjct: 188 DVFTFSM 194
>gi|302384114|ref|YP_003819937.1| histone deacetylase [Brevundimonas subvibrioides ATCC 15264]
gi|302194742|gb|ADL02314.1| Histone deacetylase [Brevundimonas subvibrioides ATCC 15264]
Length = 313
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y ++ + H F K+ R+ Q L EG + + P AS + L VH
Sbjct: 9 PVVYHPAYSMA---LPPGHRFPMLKYARLAQVLEDEGLVGPEGLYTPEPASFDMLAAVHD 65
Query: 96 ESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y++ + + P V +I +P V R+V + VGGT++AA+LA G
Sbjct: 66 PGYVRQVLDAAVPPEVERVIGLP---------VTREVSDRVQAAVGGTLMAARLALRHGL 116
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N GG HH G GFC + DI++ I + +++DLD HQG+G F
Sbjct: 117 ACNTAGGSHHAGPKGGAGFCVFNDIAVAGRAMIDAGEIRQALVVDLDVHQGDGTASIFEH 176
Query: 213 DSRVYILDMFNPGIYP 228
+ RV+ M YP
Sbjct: 177 EPRVFTFSMHGEKNYP 192
>gi|295691473|ref|YP_003595166.1| histone deacetylase [Caulobacter segnis ATCC 21756]
gi|295433376|gb|ADG12548.1| Histone deacetylase [Caulobacter segnis ATCC 21756]
Length = 304
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +EG + P E L + H+
Sbjct: 6 PIVHHPAFRAE---MPAGHRFPMDKFSRLAAVLEAEGVPGADGFARPEPVDVETLRLAHN 62
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E Y++ + I + +PP + PN V R GGT+LAA+LA ERG
Sbjct: 63 EDYVRGV-------IELSLPPEVVRRIGLPNT---ESVATRARAATGGTLLAARLALERG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH SA+ G GFC + D+++ + + +V+++DLD HQG+G + F
Sbjct: 113 IACNTAGGSHHASAESGAGFCVFNDVAVAARRLQAEGRVGQVLVVDLDVHQGDGTARIFE 172
Query: 212 SDSRVYILDMFNPGIYP 228
D V+ M +P
Sbjct: 173 DDPSVFTFSMHAEKNFP 189
>gi|392555154|ref|ZP_10302291.1| histone deacetylase superfamily protein [Pseudoalteromonas undina
NCIMB 2128]
Length = 305
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY P ++ ++ LHPFD K+ ++ L I+ P E ++ +
Sbjct: 1 MKVIYEPGFNYQLGLLKYLHPFDGEKFAKVISELGGSDI----EIIYPSEPVPTKVINEY 56
Query: 95 SESYLKSLQSSPNVSI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
++ L S + + +EVP + + +K+L P R V GT+L A+ A + G
Sbjct: 57 LNELMRKLVLSKTLVLRTLEVPSIPFVSFGFIDKKILTPMRLAVSGTLLGAENALKSGEI 116
Query: 154 I-NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-------RVMIIDLDAHQGNG 205
+ N+ GGFHH S GFC Y D+ + ++ QL S +V+IID+DAH GNG
Sbjct: 117 MWNLSGGFHHASYANMEGFCVYNDVGI----SYQQLRKSGHLSETDKVLIIDVDAHHGNG 172
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
+ F + V++LD++N IYP R ++
Sbjct: 173 NAFSFKDNENVHLLDVYNEDIYPTSQYTRNRVN 205
>gi|359454587|ref|ZP_09243865.1| acetoin utilization protein AcuC [Pseudoalteromonas sp. BSi20495]
gi|358048376|dbj|GAA80114.1| acetoin utilization protein AcuC [Pseudoalteromonas sp. BSi20495]
Length = 305
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY P ++ ++ LHPFD K+ ++ L S I+ P+E ++ +
Sbjct: 1 MKIIYEPRFNYQLGLLKYLHPFDGEKFAKVITELDSLNI----EIIHPMEPVSSVVINEY 56
Query: 95 SESYLKSLQSSPNVSI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG-- 151
++ L S + +EVP + + K+L P R V GT+L A+ A G
Sbjct: 57 LNELMRKLVLSKTLVFRALEVPKIPFVSFNFLDNKILLPMRLAVAGTLLGAERALGSGDI 116
Query: 152 -WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-----ISRVMIIDLDAHQGNG 205
W N+ GGFHH S GFC Y DI I Y ++ N +V+IID+DAH GNG
Sbjct: 117 MW--NLSGGFHHASNVNMEGFCIYNDIG--ISYQQLRKNGQLSETDKVLIIDVDAHHGNG 172
Query: 206 HEKDFSSDSRVYILDMFNPGIYPR-DYEARR 235
+ F + +++LD++N IYP D+ R
Sbjct: 173 NAYSFKDNENIHLLDVYNADIYPTSDFTRNR 203
>gi|116327589|ref|YP_797309.1| deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116331800|ref|YP_801518.1| deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
gi|116120333|gb|ABJ78376.1| Deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116125489|gb|ABJ76760.1| Deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
Length = 301
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY+I LG H F + K+ I + + L + P A +DL +V
Sbjct: 7 RIGLVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDRKLADLYVYRPEPAKDKDLTLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +LK S +++ + + ++++ F VGGTILA +L ++ +
Sbjct: 63 HTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVGGTILATELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDLDLHQGNGNSVVFQED 175
Query: 214 SRVYILDMFNPGIYPR 229
S V+ M +YP+
Sbjct: 176 SDVFTFSMHQENLYPK 191
>gi|114705872|ref|ZP_01438775.1| histone deacetylase family protein [Fulvimarina pelagi HTCC2506]
gi|114538718|gb|EAU41839.1| histone deacetylase family protein [Fulvimarina pelagi HTCC2506]
Length = 300
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P +D F ++ H F SK+ R+ + L +G N P A L + H
Sbjct: 3 LPIVHHPAFDARF---DEAHRFPMSKFSRLAKILKEDGLDGPNGFYVPAPALPGWLQLAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y+ + + VPP +V V R GGT+L A+LA G A
Sbjct: 60 DARYVDQVLGA-------NVPPATEKAIGFVVDPAVALRSRTATGGTVLTARLALGEGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N GG HH SA G GF + D+++ ++ R++I+D D HQG+G + F D
Sbjct: 113 CNTAGGSHHASATGGAGFSVFNDVAVAAKVLLADGDVDRILIVDCDVHQGDGTARIFEGD 172
Query: 214 SRVYILDMFNPGIYP 228
SRV+ + YP
Sbjct: 173 SRVFTFSVHGEKNYP 187
>gi|254456264|ref|ZP_05069693.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083266|gb|EDZ60692.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 297
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP++ DY ++ +G + H F +K+G + ++L + + KN P+ S E L
Sbjct: 2 ELPVVNHKDY-VAKIGDD--HKFPINKFGELAKYLIEQKVV-KN-FFNPVACSFETLNRA 56
Query: 94 HSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
HSE Y+ +++ N I P V + +VQR ++ GGT+LA+KLA
Sbjct: 57 HSEDYIHDIKNKTLDKNKIKKIGFPLV----DSVVQRSLV-----ATGGTVLASKLALNY 107
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A N GG HH + D G G+C + D+++ HY + +R++I+DLD HQGNG+ + F
Sbjct: 108 GIACNTAGGSHHANYDSGAGYCVFNDVAVAAHYLLDKGFANRILIVDLDVHQGNGNSEIF 167
Query: 211 SSDSRVYILDMFNPGIYP 228
+ V+ M + YP
Sbjct: 168 KYNRHVFTFSMHSKTNYP 185
>gi|428781211|ref|YP_007172997.1| deacetylase [Dactylococcopsis salina PCC 8305]
gi|428695490|gb|AFZ51640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Dactylococcopsis salina PCC 8305]
Length = 307
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F +K+G + + L ++G ++ + +P A +E L +VH
Sbjct: 3 LPIIYHPDY---VTPLPPGHRFPMAKFGLLYEILLADGIIEPQQVHQPEIAPREWLELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ + S QR++ P+ +Q VGGTIL AKL
Sbjct: 60 TSEYVEDYCNGTLDSK--------------AQRRIGLPWSEQLAHRTCLAVGGTILTAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E+G A N GG HH D G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 106 ALEQGLACNTAGGTHHAFPDYGAGFCIFNDLAIAPSVMLNLGLVEKILIVDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDM 221
F D RV+ M
Sbjct: 166 AFIFQDDPRVFTFSM 180
>gi|183220176|ref|YP_001838172.1| putative arginase/deacetylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910296|ref|YP_001961851.1| deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774972|gb|ABZ93273.1| Deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778598|gb|ABZ96896.1| Putative arginase/deacetylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 299
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY Y++ G H F + K+ + + + I+ P + DL +VH
Sbjct: 6 LALIYHSSYNLELPG----HVFPAHKYSHLYNRVKRDPVYASWDILLPKKVDDADLELVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
++ YL L S E P ++ + R ++ F VGGT+LA++L+ + +A
Sbjct: 62 TKEYLDDLFS-------YEHTPRTMYSELPLNRSIVESFMYGVGGTVLASELSDKHQFAF 114
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+GGG+HH D GFC D+++ + +IIDLD HQGNG+ F D
Sbjct: 115 NMGGGYHHSFPDRAEGFCYLNDVAIAVKKQKETKPDINALIIDLDLHQGNGNSYIFQYDD 174
Query: 215 RVYILDMFNPGIYPR 229
+V+ M +YP+
Sbjct: 175 KVFTFSMHQGNLYPK 189
>gi|392404048|ref|YP_006440660.1| histone deacetylase superfamily [Turneriella parva DSM 21527]
gi|390612002|gb|AFM13154.1| histone deacetylase superfamily [Turneriella parva DSM 21527]
Length = 294
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L+YSP YD+S + H + K+ ++ L + EP+ A+KE LL+VH+E
Sbjct: 8 LVYSPIYDLS----DYTHVISAGKYRQLYDALK----FSRWNWNEPVAATKEQLLLVHTE 59
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
YLK + + E A P + +++ GGTILAA+LA + G A N+
Sbjct: 60 RYLKDFLGAR----LTEQTQRAEIP---IDERIVNAVCTAAGGTILAAELALKHGVASNL 112
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGFHH AD GFC D L I +V +IDLD HQGNG K D
Sbjct: 113 SGGFHHAFADHAEGFCFVNDTVLAIRALRKTRPGLKVAVIDLDVHQGNGTAKLLQGDENS 172
Query: 217 YILDMFNPGIYP 228
Y M YP
Sbjct: 173 YTFSMHEKENYP 184
>gi|118357387|ref|XP_001011943.1| Histone deacetylase family protein [Tetrahymena thermophila]
gi|89293710|gb|EAR91698.1| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 458
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LP++Y P Y+I+ GIEKLHPFDS K+GR+ L +GFL + +P E L+
Sbjct: 78 IENLPILYHPSYNITACGIEKLHPFDSVKYGRVFNILKEKGFLQEQGFYKPKEKVGRGLM 137
Query: 92 VVHSES--YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ S YL L + VS IE+ P+ P ++ KVL P G+I AA L+ +
Sbjct: 138 LHLGMSPLYLLYLNYAAYVSKCIEI-PLFFLPASFLRWKVLDPMMFSTQGSIDAAVLSLK 196
Query: 150 RGWAINVGGGFHH 162
RGW+IN+ GG+HH
Sbjct: 197 RGWSINLSGGYHH 209
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR-VYILDMFNPGI 226
GGGFC Y DI I Y I R MI+DLDAHQGNGHE+DF D +ILD +N I
Sbjct: 271 GGGFCIYPDICFAIEYLRKCFGIKRCMIVDLDAHQGNGHERDFIDDKENTFILDFYNHSI 330
Query: 227 YPRDYEARRFI 237
YP D A + I
Sbjct: 331 YPADTFAAKGI 341
>gi|392398578|ref|YP_006435179.1| deacetylase [Flexibacter litoralis DSM 6794]
gi|390529656|gb|AFM05386.1| deacetylase, histone deacetylase/acetoin utilization protein
[Flexibacter litoralis DSM 6794]
Length = 300
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y S + + H F K+ + + L EG K EP+ S++ ++ VH
Sbjct: 2 LKIAFSPVYAHS---LPQTHRFPMLKYELLPEQLIYEGTATKENFFEPIPISEKKIVRVH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+ Y L++ +S+ + FP LV R+++ GGTI ++ A + G
Sbjct: 59 TSEYWNKLKT---LSLTKKEIRKTGFPLSQKLVDREIII-----AGGTIQNSEFALQYGA 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
++N+ GG HH + G GFC DI+L ++ + NI++++IIDLD HQGNG + F +
Sbjct: 111 SMNIAGGTHHAFTEHGEGFCLLNDIALASYHLIDEHNINKILIIDLDVHQGNGTAEIFQN 170
Query: 213 DSRVYILDMFNPGIYPRDYE 232
+ RV+ M YP E
Sbjct: 171 EKRVFTFSMHGEKNYPHKKE 190
>gi|119584571|gb|EAW64167.1| histone deacetylase 11, isoform CRA_k [Homo sapiens]
Length = 225
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
>gi|428776510|ref|YP_007168297.1| histone deacetylase [Halothece sp. PCC 7418]
gi|428690789|gb|AFZ44083.1| Histone deacetylase [Halothece sp. PCC 7418]
Length = 300
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY PDY + K H F +K+ + + L ++G + + +P +E L +
Sbjct: 1 MPLPIIYHPDY---VTPLPKGHRFPMAKFSLLQEILIADGVIQPQQVHQPELPPREWLEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H+ Y+ + P I +P + LV+R L VGGTIL AKLA E
Sbjct: 58 IHTPDYVDAYCDGTLDPKAQRRIGLP----WSPELVRRTCL-----AVGGTILTAKLALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH D G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 109 QGIACNTAGGTHHAFPDYGAGFCIFNDLAVAPAVMLALGLVKKVLIVDLDVHQGDGTAFV 168
Query: 210 FSSDSRVYILDM 221
F D RV+ M
Sbjct: 169 FQDDPRVFTFSM 180
>gi|313674860|ref|YP_004052856.1| histone deacetylase [Marivirga tractuosa DSM 4126]
gi|312941558|gb|ADR20748.1| Histone deacetylase [Marivirga tractuosa DSM 4126]
Length = 300
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + ++ P S+ED+L VH+ Y + L+ N+++ +
Sbjct: 18 HRFPMIKYELLPEQLIYEGTVTESSFFSPNLLSEEDILAVHTNEYWQKLK---NLTLSRK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+ R GTI AA A E G A+N+ GG HH D G GF
Sbjct: 75 EERRTGFPLSAALIERE-----RIINQGTIDAANFALEYGVAMNIAGGTHHAFTDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ Y +S+++++DLD HQGNG + F + V+ M G YP +
Sbjct: 130 CLLNDIAIAAQYLLKNAKVSKILVVDLDVHQGNGTAEIFRDNPDVFTFSMHGKGNYPM-H 188
Query: 232 EARRFIDQKVE 242
+ R +D ++E
Sbjct: 189 KERSDLDIEME 199
>gi|443693723|gb|ELT95017.1| hypothetical protein CAPTEDRAFT_228874 [Capitella teleta]
Length = 308
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ DY +S L + H F K+ + ++L + + + P E S E +VH
Sbjct: 6 LPIIHHHDY-VSTL--PRKHRFAMRKFHGVLEYLKRDQVITMKQVHSPDEVSHETAALVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ ++ E + + R+ R + GGT+L+ +LA+ERG A
Sbjct: 63 SEEYIHKF--FHGLTDAKEQRRTGFVWDEGLARRC----RLEAGGTLLSTQLARERGLAC 116
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GGG HH D G GFC D+++ YA + RV+I+DLD HQG+G K ++
Sbjct: 117 NTGGGTHHAFRDYGSGFCLINDMAIAAKYALKAGIVERVLIVDLDVHQGDGTAKILENEE 176
Query: 215 RVYILDMFNPGIYP 228
++ M + +P
Sbjct: 177 CIFTFSMHSAKNFP 190
>gi|119584567|gb|EAW64163.1| histone deacetylase 11, isoform CRA_g [Homo sapiens]
Length = 213
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
ISR IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 93 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 146
>gi|88799789|ref|ZP_01115363.1| Deacetylase, including yeast histone deacetylase and acetoin
utilization protein [Reinekea blandensis MED297]
gi|88777523|gb|EAR08724.1| Deacetylase, including yeast histone deacetylase and acetoin
utilization protein [Reinekea sp. MED297]
Length = 306
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KLPLIY P Y F + H F K+ R+ L + G L + P A++ + +
Sbjct: 1 MKLPLIYHPGYSPEF---DANHRFPMEKFARLYDRLENIGLLRHCELFRPEPANEATIRL 57
Query: 93 VHSESYL---KSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y+ + Q S I +P + +++R L VGG++L+ +LA E
Sbjct: 58 AHHPDYVTGYRDNQLSAKAMRRIGLP----WSEGVMRRTFL-----AVGGSLLSTELALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
RG A ++ GG HH EG GFC + D+++C +A + I RV+IID D HQG+G +
Sbjct: 109 RGLAAHLAGGTHHAHYQEGSGFCIFNDLAICARHALTKPGIDRVLIIDTDVHQGDGTARI 168
Query: 210 FSSD 213
+D
Sbjct: 169 LDND 172
>gi|318042114|ref|ZP_07974070.1| histone deacetylase family protein [Synechococcus sp. CB0101]
Length = 304
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+ P +Y P Y + H F +K+ + Q L +G + + VEPL A + L +
Sbjct: 1 MRPPFVYHPAYSAP---LPSSHRFPMAKFRLLHQLLQDQGLANVDQFVEPLPAPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH Y ++ Q + + P LVQR L VGGT+L A+
Sbjct: 58 VHEPRYHRAFARGELSHQEQRRIGLPATTP--------LVQRTWL-----AVGGTVLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + D ++ + + ++M+IDLD HQG+
Sbjct: 105 LALEHGLACHLAGGTHHAYPDHGSGFCIFNDCAVAARVLLAESRVQQLMVIDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
F+ + RV+ + + +P
Sbjct: 165 TAAIFADEPRVFTVSVHCQSNFP 187
>gi|90420420|ref|ZP_01228327.1| putative histone deacetylase protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335148|gb|EAS48901.1| putative histone deacetylase protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 300
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ P +D F + H F SK+ R+ + L +G + EP A + L + H
Sbjct: 3 LPIIHHPAFDADF---DAAHRFPMSKFSRLAEILVEDGLVAPGGYHEPAPAPQNWLRLAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPP-VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y+ + + VPP + V KV R GGT+L A LA G A
Sbjct: 60 DPLYVDQV-------LFSAVPPQMEKAIGFRVDEKVALRSRCATGGTVLTAHLALVEGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N GG HH + D G GF + D+++ + RV+I+D D HQG+G + F ++
Sbjct: 113 CNTAGGSHHAARDCGAGFSVFNDVAVAASLLLADGDAGRVLIVDCDVHQGDGTARIFENE 172
Query: 214 SRVYILDMFNPGIYP 228
RV+ L + YP
Sbjct: 173 RRVFTLSLHGARNYP 187
>gi|78185032|ref|YP_377467.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp.
CC9902]
gi|78169326|gb|ABB26423.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. CC9902]
Length = 305
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y + H F +K+ + Q L +G +++ I PL ++ DL +H
Sbjct: 4 PVVYHPRYSAE---LPSTHRFPMAKFKLLHQLLLDQGLIERKQIHVPLSIARRDLEEIHP 60
Query: 96 ESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y ++ Q + I +P + LVQR L VGGT+L A+LA G
Sbjct: 61 RRYHETFSRDQLTRPEQRRIGLPATS----ALVQRTWL-----AVGGTLLTARLALRYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F +
Sbjct: 112 ANHLAGGTHHAHPDFGSGFCIFNDCAVAAKVLLRRREVERILIVDLDVHQGDGSAACFQT 171
Query: 213 DSRVYILDMFNPGIYP 228
D RV + +P
Sbjct: 172 DERVTTFSVHAASNFP 187
>gi|24215622|ref|NP_713103.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|386074823|ref|YP_005989141.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
gi|24196779|gb|AAN50121.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|353458613|gb|AER03158.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
Length = 302
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S + + + + +++++ F VGGTIL+ +LA++ +
Sbjct: 63 HTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVGGTILSMELAQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F +D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQND 175
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 176 PDVFTFSMHQENLYPK 191
>gi|410632681|ref|ZP_11343334.1| histone deacetylase family protein [Glaciecola arctica BSs20135]
gi|410147760|dbj|GAC20201.1| histone deacetylase family protein [Glaciecola arctica BSs20135]
Length = 298
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 25/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L+ G DK+ +P+ S +DL V
Sbjct: 2 IPLVFHPIY--SQLDLAVRHRFPIEKYQGIRDRLAELGVTDKS-FQQPMPVSPQDLRQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L S + P A+ R++ +P+ +Q VGGT+L A+L
Sbjct: 59 NPQYIQQLVSG-------TLDPKAM-------RRIGFPWSEQLIQRSLTAVGGTVLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GG+HH A+ G GFC + D+ L + NI +V+I D D HQG+G
Sbjct: 105 ALQHGKALNLTGGYHHAFANYGSGFCLFNDLYLAALTMLQKPNIDKVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
K S+++V+ L + +P
Sbjct: 165 AKLAESNAQVFTLSIHGEKNFP 186
>gi|359683254|ref|ZP_09253255.1| deacetylase [Leptospira santarosai str. 2000030832]
Length = 292
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY+I LG H F + K+ I + + L + P A+ +DL +VH+E
Sbjct: 1 MVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDHKLANLYVYRPEPATDKDLALVHTE 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S I E + P + ++++ F VGGTILA +L ++ + ++
Sbjct: 57 EFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVGGTILATELTEKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDLDLHQGNGNSVVFQEDPDV 169
Query: 217 YILDMFNPGIYPR 229
+ M +YP+
Sbjct: 170 FTFSMHQENLYPK 182
>gi|116075072|ref|ZP_01472332.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9916]
gi|116067269|gb|EAU73023.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9916]
Length = 303
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y + H F +K+ + Q L G + + I P+ S+ DL VH
Sbjct: 2 LPLVYHPLYSAP---LPSSHRFPMAKFHLLHQLLLDRGTVQEQQIHRPVSISRRDLEQVH 58
Query: 95 SESY-----LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y L +L I + A P LVQR L VGGT+L A+LA E
Sbjct: 59 ERQYHQAFCLGTLTREQQRRIGLP----ATRP--LVQRTWL-----AVGGTLLTARLALE 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH G GFC + D ++ Q + +V+++DLD HQG+G
Sbjct: 108 AGLACHLAGGTHHAHPGFGSGFCIFNDCAVAASVLLAQGMVRQVLVVDLDVHQGDGTAAC 167
Query: 210 FSSDSRVYILDMFNPGIYP 228
F+SD RV+ L + +P
Sbjct: 168 FASDPRVFTLSVHAASNFP 186
>gi|297184109|gb|ADI20228.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 300
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F SK+ + Q L EG L + P AS+ +L H Y +SL SI
Sbjct: 18 HRFPMSKYSLLPQQLLYEGTLTQENFFAPDLASETQVLRTHCPYYFQSLLDG---SI--- 71
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ QRK+ +P+ Q+ GTI A E G ++N+ GG HH
Sbjct: 72 --------DGKAQRKIGFPWSAQLIERERTIGQGTIDNTSFAIENGCSLNIAGGTHHAFY 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC DI L HYA +SR++++DLD HQGNG + DSR++ M
Sbjct: 124 DRGEGFCMLNDIMLAAHYALDYSGVSRILVVDLDVHQGNGTAAMAADDSRIFTFSMHGEK 183
Query: 226 IYPRDYEA 233
YP E+
Sbjct: 184 NYPYHKES 191
>gi|78213287|ref|YP_382066.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp.
CC9605]
gi|78197746|gb|ABB35511.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. CC9605]
Length = 316
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y P Y + H F +K+ + Q L +G + + + PL ++ DL
Sbjct: 12 LPLPVVYHPHYSAP---LPSTHRFPMAKFRLLHQLLLEQGVVQADEVHRPLSIARRDLES 68
Query: 93 VHSESYLKSLQ----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH +Y ++ S P I +P LVQR L VGGT+L A+LA
Sbjct: 69 VHPRTYHEAFSRDHLSRPE-QRRIGLPAT----RPLVQRTWL-----AVGGTLLTARLAL 118
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+RG A ++ GG HH G GFC + D ++ + R++I+DLD HQG+G
Sbjct: 119 QRGLASHLAGGTHHAHPGFGSGFCIFNDCAVAARVLLRTGEVRRILIVDLDVHQGDGSAA 178
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F D RV L + +P
Sbjct: 179 CFQHDPRVTTLSVHAASNFP 198
>gi|398342481|ref|ZP_10527184.1| deacetylase [Leptospira inadai serovar Lyme str. 10]
Length = 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ LIY P+Y++ LG H F + K+G I + + L ++P E+L +V
Sbjct: 35 RIALIYHPEYNMD-LGA---HVFPARKYGMIYNLVKEDPKLSGLVALQPAPVGVEELSLV 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ +L + + ++ + ++++ F VGGTILA + + +
Sbjct: 91 HTPEFLSDFMN-------LRYTDRTMYSELPLNKEIVRSFCLGVGGTILATETTENYKYV 143
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +V+ IDLD HQGNG+ K F D
Sbjct: 144 YHIGGGFHHSMPDRAEGFCYLNDAAVATKLYLQKYPDKKVLYIDLDLHQGNGNAKVFKDD 203
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 204 PAVWTFSMHQEQLYPK 219
>gi|398348063|ref|ZP_10532766.1| deacetylase [Leptospira broomii str. 5399]
Length = 330
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ LIY P+Y++ LG H F + K+G I + + L ++P E+L +V
Sbjct: 35 RIALIYHPEYNMD-LGA---HVFPARKYGMIYNLVKEDPKLSGLLALQPAPVGVEELSLV 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ +L + + ++ + ++++ F VGGTILA + + +
Sbjct: 91 HTPEFLSDFMN-------LRYTDRTMYSELPLNKEIVRSFCLGVGGTILATETTENYKYV 143
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +V+ IDLD HQGNG+ K F D
Sbjct: 144 YHIGGGFHHSMPDRAEGFCYLNDAAVATKLYLQKYPDKKVLYIDLDLHQGNGNAKVFKDD 203
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 204 PSVWTFSMHQEQLYPK 219
>gi|408792422|ref|ZP_11204032.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408463832|gb|EKJ87557.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 278
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I+ P +A + DL +VH++ YL L S + S ++ + R ++ F VG
Sbjct: 25 ILLPKKAEEADLELVHTKEYLDDLFSYEHTS-------RTMYSELPLNRSIVESFMYGVG 77
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTI+A++L+K +A N+GGG+HH D+ GFC D+++ I +IIDL
Sbjct: 78 GTIMASELSKTSQFAFNMGGGYHHSFPDKAEGFCYLNDVAIAIRKQKETNPELNALIIDL 137
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F D +V+ M +YP+
Sbjct: 138 DLHQGNGNSYIFQYDDKVFTFSMHQGNLYPK 168
>gi|94970928|ref|YP_592976.1| histone deacetylase superfamily protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552978|gb|ABF42902.1| histone deacetylase superfamily [Candidatus Koribacter versatilis
Ellin345]
Length = 357
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+ + L+YS Y + H F + K+ + Q L EG + P A++ D
Sbjct: 21 VSMLPFKLVYSDHYRLPL----GEHVFPTQKYELVKQELLEEGVASTQDFLTPTPATEAD 76
Query: 90 LLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+L+VHS Y+ L + + +E+P + + F GGTILAA+
Sbjct: 77 VLLVHSHFYVDKLIEGTLTAREELALEIP---------YSHEAVQAFLWHTGGTILAAER 127
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G A N+GGGFHH D G GFC D+++ I Q I RVM +D D HQGNG
Sbjct: 128 ALSDGVAFNLGGGFHHAYPDHGEGFCMIHDVAVAIRKLQKQGRIQRVMTLDCDVHQGNG 186
>gi|381205004|ref|ZP_09912075.1| histone deacetylase/AcuC/AphA family protein [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 319
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY PDYDI E H F SK+ R+ + +S E L +P AS + L VH
Sbjct: 5 LPLIYHPDYDIPEWNEE--HRFPMSKFRRLYKIISEEKSLSPVEFHQPEVASTDHLQAVH 62
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ + + + I +P + L +R + +GGTIL +LA + G
Sbjct: 63 TLDYIQQFMENRLDKSAARRIGLP----WTEGLARRTI-----TAIGGTILTLQLALKHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N+GGG HH D G GFC + D S+ + ++ +++I+DLD HQG+G
Sbjct: 114 LACNLGGGTHHAFPDFGSGFCIFNDASVAARMLLQEGSVQQILIVDLDVHQGDGTAFIHQ 173
Query: 212 SDSRVYILDMFNPGIYP 228
+ V+ M +P
Sbjct: 174 DEVAVFTFSMHCQSNFP 190
>gi|156404296|ref|XP_001640343.1| predicted protein [Nematostella vectensis]
gi|156227477|gb|EDO48280.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y F H F +K+ ++ ++L + + N + P AS +DL+ VH
Sbjct: 1 LPVIHHDQYSCPF---PPQHRFKMAKFTKLMEWLLKDNVVIPNQVYRPFFASYDDLIKVH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL-FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ + I E + FP LV+R R +VGGTIL A++A E G
Sbjct: 58 TPDYVRNFL----LGTISERDMKQIGFPWSEGLVRRT-----RMEVGGTILTARIALECG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A + GGG HH G GFC + D+++ Y ++RVMI+DLD HQG+G F
Sbjct: 109 LACSTGGGTHHAFPSHGSGFCIFNDLAITASYLLDNNLVTRVMIVDLDVHQGDGTASIFQ 168
Query: 212 SDSRVYILDMFNPGIYP 228
++ V+ + +P
Sbjct: 169 NEPNVFTFSAHSEKNFP 185
>gi|37521188|ref|NP_924565.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
gi|35212184|dbj|BAC89560.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
Length = 303
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP +YSP Y+ + + H F K+ R+ +L ++G EP A E L +
Sbjct: 1 MELPFVYSPRYEAN---LPPAHRFPMGKFSRLHHYLLNQGVARPEQFWEPERAGWEWLTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
VH+ Y+ + + E + L + LV+R VGGTIL A+LA G
Sbjct: 58 VHAPRYVADFCAG--ILSAQEFRRIGLPWSPALVERTC-----TAVGGTILTARLALRHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH D G GFC + D+++ + + RV+I+DLD HQG+G F+
Sbjct: 111 LACNTCGGTHHAFPDFGSGFCIFNDLAVSARVLLAEGQVRRVLIVDLDVHQGDGTAWIFA 170
Query: 212 SDSRVYILDM 221
+ V+ M
Sbjct: 171 DEPGVFTFSM 180
>gi|317969127|ref|ZP_07970517.1| histone deacetylase family protein [Synechococcus sp. CB0205]
Length = 304
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y P Y + H F +K+ + L +G + I PL + L +
Sbjct: 1 MRLPLVYHPAYSAP---LPSSHRFPMAKFKLLRALLEEQGLAREEQIHTPLPVPRRSLEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+HS Y ++ P I +P LVQR L VGG++L A+LA +
Sbjct: 58 IHSRRYHQAFARGELLPAEQRRIGLPAT----TPLVQRTWL-----AVGGSLLTARLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G + ++ GG HH D G GFC + D ++ + + R+MIIDLD HQG+
Sbjct: 109 HGVSCHLAGGTHHAYPDHGSGFCIFNDFAVAAQVLLAEGQVQRLMIIDLDVHQGDATASI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F + RV+ L + +P
Sbjct: 169 FRDEPRVFTLSVHCGSNFP 187
>gi|422002976|ref|ZP_16350210.1| deacetylase [Leptospira santarosai serovar Shermani str. LT 821]
gi|417258446|gb|EKT87834.1| deacetylase [Leptospira santarosai serovar Shermani str. LT 821]
Length = 292
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY+I LG H F + K+ I + + L + P A +DL +VH+E
Sbjct: 1 MVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDHKLANLYVYRPEPAKDKDLALVHTE 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S I E + P + ++++ F VGGTILA +L ++ + ++
Sbjct: 57 EFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVGGTILATELTEKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDLDLHQGNGNSVVFQEDPDV 169
Query: 217 YILDMFNPGIYPR 229
+ M +YP+
Sbjct: 170 FTFSMHQENLYPK 182
>gi|304570490|ref|YP_001104.2| histone deacetylase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 302
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S + + + + +++++ F VGGTIL+ +L ++ +
Sbjct: 63 HTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F +D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQND 175
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 176 PDVFTFSMHQENLYPK 191
>gi|418678733|ref|ZP_13240007.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418687687|ref|ZP_13248846.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741912|ref|ZP_13298285.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421129283|ref|ZP_15589484.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|400321923|gb|EJO69783.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410359479|gb|EKP06577.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|410738011|gb|EKQ82750.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750270|gb|EKR07250.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 302
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S +++ + + +++++ F VGGTIL+ +L ++ +
Sbjct: 63 HTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDLDLHQGNGNSFVFQDD 175
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 176 PDVFTFSMHQENLYPK 191
>gi|87123802|ref|ZP_01079652.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9917]
gi|86168371|gb|EAQ69628.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9917]
Length = 304
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y P Y + H F +K+ + L G++ + + P+ ++ DL +H
Sbjct: 3 LPIVYHPRYSTP---LPSSHRFPMAKFRLLHDLLLERGWIRPDAVKRPVSIARRDLERIH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY ++ Q I +P + LVQR L VGGT+L A+LA G
Sbjct: 60 DRSYHQAFSRGQLGRAEQRRIGLP----NSHALVQRTWL-----AVGGTLLTARLALRHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH G GFC + D ++ + + R+M++DLD HQG+G F+
Sbjct: 111 IASHLAGGTHHAHPGYGSGFCIFNDCAVTAAVLLAEGAVKRLMVVDLDVHQGDGTAACFA 170
Query: 212 SDSRVYILDMFNPGIYP 228
+D RV+ L + +P
Sbjct: 171 TDPRVFTLSVHAQSNFP 187
>gi|113954553|ref|YP_729977.1| histone deacetylase [Synechococcus sp. CC9311]
gi|113881904|gb|ABI46862.1| histone deacetylase family protein [Synechococcus sp. CC9311]
Length = 304
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+PL+Y P Y + H F +K+ + + L+ G + PL A + L
Sbjct: 1 MAVPLVYHPAYSAP---LPSSHRFPMAKFRLLSEALTDLGLMTPQQWHRPLPAPRRWLET 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH SY ++ Q+ + + P LVQR L VGGT+L A+
Sbjct: 58 VHKRSYHEAFARGRLDRQAQRRIGLPATTP--------LVQRTWL-----AVGGTLLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + DI++ + + R+MI+DLD HQG+
Sbjct: 105 LALEHGVACHLAGGTHHAFPDYGSGFCIFNDIAVSARVLLEEGRLERLMIVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
F+ D RV+ +P
Sbjct: 165 TALIFADDPRVFTFSAHAASNFP 187
>gi|149917141|ref|ZP_01905641.1| Histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
gi|149822057|gb|EDM81450.1| Histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
Length = 623
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 55 PFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE- 113
P D + RI L EG + C+V P A+ L VH ++YL+ L+S+ +
Sbjct: 46 PVDGMRGERILSALVREGLVGPECVVRPTPAAFVKLARVHDQAYLERLESAAVMEQAFGE 105
Query: 114 -VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER-GWAINVGGGFHHCSADEGGGF 171
VPP +QR + VGGT+LAA+ A R A+N+GGGFHH D GGF
Sbjct: 106 VVPPGPATAIVELQRAM-------VGGTMLAARAAWRRHKLAVNLGGGFHHARRDRAGGF 158
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
C D+++ I + ++DLD H G+G F+ D V+ + N
Sbjct: 159 CLLNDVAVAIAELRASGFTGPISVVDLDLHDGDGTRLMFADDPSVWTFSIHN 210
>gi|294084024|ref|YP_003550781.1| histone deacetylase superfamily protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663596|gb|ADE38697.1| histone deacetylase superfamily [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 304
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L ++ PDYDI + H F S K+ R+ L +EG L + P+ A+ E L +H
Sbjct: 2 LHIVSHPDYDIP---LADGHRFPSRKFTRLISHLDAEGILAEFTHATPIPATIEALSQIH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALF--PNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+ S+ SI E V F L +R L P GT++ A+LA+E G
Sbjct: 59 DPNYVASIHDG---SITTEALRVLGFEWSEALARRSFLAP-----NGTLMTARLAREHGL 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A + GG HH G GFC + DI+ I +V+I+D D HQG+G +
Sbjct: 111 ACHAAGGTHHAHYGHGAGFCVFNDIAFTAINLLRDPGIDQVLILDCDVHQGDGTARMLMD 170
Query: 213 DSRVYILDMFNPGIYP 228
+ R + + YP
Sbjct: 171 EDRAVTVSLHCATNYP 186
>gi|398339724|ref|ZP_10524427.1| histone deacetylase [Leptospira kirschneri serovar Bim str. 1051]
Length = 293
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY++ LG H F + K+ + + + L I +P A +DL +VH++
Sbjct: 1 MVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLVHTQ 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S +++ + + +++++ F VGGTIL+ +L ++ + ++
Sbjct: 57 EFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDLDLHQGNGNSFVFQDDPDV 169
Query: 217 YILDMFNPGIYPR 229
+ M +YP+
Sbjct: 170 FTFSMHQENLYPK 182
>gi|347754121|ref|YP_004861685.1| deacetylase [Candidatus Chloracidobacterium thermophilum B]
gi|347586639|gb|AEP11169.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 299
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y+P Y F+ I H F K+ R+ L EG L +V P A +ED+L+ H+ Y
Sbjct: 5 YAPGY---FVDIGDAHVFPMVKFPRVHAQLIEEGTLSPEDVVAPAPAREEDILLAHTRDY 61
Query: 99 LKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
L Q +P + +P + LV R R GT+ AA+ A G A N
Sbjct: 62 WTRLAAGQLTPRELRRLGLP----WSEGLVMRA-----RLAAQGTLNAARHALAEGVAGN 112
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
+ GG HH D G GFC DI++ + + ++ RV +ID D HQGN + F+ +S
Sbjct: 113 LAGGTHHAFPDHGEGFCVLNDIAIAVRVLQREGDVGRVALIDCDVHQGNANAVIFAGESD 172
Query: 216 VYILDMFNPGIYP 228
V+ M YP
Sbjct: 173 VFTFSMHGRNNYP 185
>gi|434393911|ref|YP_007128858.1| Histone deacetylase [Gloeocapsa sp. PCC 7428]
gi|428265752|gb|AFZ31698.1| Histone deacetylase [Gloeocapsa sp. PCC 7428]
Length = 304
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F K+ R+ + L ++G P++ E + +VH
Sbjct: 3 LPIIYHPDY---VAPLPEGHRFPMPKFSRLYELLIADGVAHPAQFHTPVQPPSEWITLVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y ++ + P I +P + + LV+R + VGGTIL AKLA G
Sbjct: 60 TPDYFQAYCTGTLDPKAQRRIGLP----WSSALVKRTCI-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDF 210
A N GG HH G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIAAR-VLQQLQLVKKVLIVDLDVHQGDGTAYIF 169
Query: 211 SSDSRVYILDM 221
D+ V+ M
Sbjct: 170 QEDASVFTFSM 180
>gi|254413119|ref|ZP_05026891.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180283|gb|EDX75275.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
Length = 304
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F SK+G++C+ L ++ + I P +E + +
Sbjct: 1 MNLPIVYHPDY---VTPLPPGHRFPMSKFGKLCELLLADTIVTSEQIHTPNPPPREWIQL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H+ Y+++ + P I +P + LV R VGGTIL A+LA
Sbjct: 58 IHTPDYIQAYCNGTLDPKAQRRIGLP----WSPGLVTRTC-----TAVGGTILTAQLALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 109 HGIACNTAGGTHHAFPSYGSGFCIFNDLAIATRVLQTMGLVQKILILDLDVHQGDGTAFI 168
Query: 210 FSSDSRVYILDM 221
F +D V+ M
Sbjct: 169 FQNDPTVFTFSM 180
>gi|260434634|ref|ZP_05788604.1| histone deacetylase family protein [Synechococcus sp. WH 8109]
gi|260412508|gb|EEX05804.1| histone deacetylase family protein [Synechococcus sp. WH 8109]
Length = 305
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y P Y + H F +K+ + Q L +G + + + PL ++ DL
Sbjct: 1 MPLPVVYHPHYSAP---LPSTHRFPMAKFRLLHQLLLEQGVVQADEVHRPLSIARRDLES 57
Query: 93 VHSESYLKSLQ----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH Y ++ + P I +P LVQR L VGGT+L A+LA
Sbjct: 58 VHPRRYHEAFSRDRLTRPE-QRRIGLPAT----RPLVQRTWL-----AVGGTLLTARLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+RG A ++ GG HH G GFC + D ++ + R++I+DLD HQG+G
Sbjct: 108 KRGLASHLAGGTHHAHPGFGSGFCIFNDCAVAARVLLGTGEVRRILIVDLDVHQGDGSAA 167
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F D RV L + +P
Sbjct: 168 CFQHDPRVTTLSVHAASNFP 187
>gi|262277700|ref|ZP_06055493.1| histone deacetylase family protein [alpha proteobacterium HIMB114]
gi|262224803|gb|EEY75262.1| histone deacetylase family protein [alpha proteobacterium HIMB114]
Length = 300
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I PDY ++ +G + H F K+G + + L + EP E S LL VH
Sbjct: 2 LPIINHPDY-VAQIGDD--HRFPIKKFGELIKLLRKKNIATTYNTFEPDEVSVPTLLNVH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + N+S+ + FP R+ + GGT+LA+KLA + A
Sbjct: 59 SEEYINKIN---NLSLDKDEIRKLGFPLVTSVRRRSFV---ATGGTVLASKLAVKHKLAC 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GG HH +++G G+C + D+++ Y + +++IIDLD HQG+G K F SD
Sbjct: 113 NTAGGSHHAFSNQGNGYCVFNDVAVATSYLKKKYKYKKILIIDLDVHQGDGTAKIFESDD 172
Query: 215 RVYILDMFNPGIYP 228
V+ + + + YP
Sbjct: 173 SVFTVSIHSKKNYP 186
>gi|94501715|ref|ZP_01308229.1| putative histone deacetylase family protein [Oceanobacter sp.
RED65]
gi|94426115|gb|EAT11109.1| putative histone deacetylase family protein [Oceanobacter sp.
RED65]
Length = 305
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
L LIY P+Y F + H F SK+ R+ + + EG++ D + +++P AS EDL +
Sbjct: 2 LKLIYHPNYSCDF---PENHRFVMSKFVRLYEVATREGWVLADGSNVLQPQAASLEDLSI 58
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +YL L + P I +P + LV R + P GT+LAA+ A +
Sbjct: 59 VHDATYLNGLVGNDIDPKAWRRIGLP----WSQGLVDRTLTAP-----NGTLLAARTALQ 109
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D G GFC D++ + R++I D D HQG+G
Sbjct: 110 EGLACHLAGGTHHAHRDFGSGFCMINDLAYAAKTLVANNEVQRILIFDCDVHQGDGTAAI 169
Query: 210 FSSDSRVY 217
+D+ ++
Sbjct: 170 LENDADIF 177
>gi|345310682|ref|XP_001518456.2| PREDICTED: hypothetical protein LOC100088905 [Ornithorhynchus
anatinus]
Length = 241
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY D+P P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E + + IV
Sbjct: 47 TELYQDVPSTCWPIVYSPGYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDMIVAAR 106
Query: 84 EASKEDLLVVHSESYLKSLQ 103
EA++EDLLVVH+ YL L+
Sbjct: 107 EATEEDLLVVHTRRYLNRLK 126
>gi|428770468|ref|YP_007162258.1| histone deacetylase [Cyanobacterium aponinum PCC 10605]
gi|428684747|gb|AFZ54214.1| Histone deacetylase [Cyanobacterium aponinum PCC 10605]
Length = 300
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + + H F K+ + + L + + + +P A+ + L +
Sbjct: 1 MNLPVVYHSDY---VTPLPEQHRFPMPKFKLLYELLLKDQIITQESTYKPTIANDKLLQL 57
Query: 93 VHSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+E+Y+ I +P + LV+R VGGTIL +LA E
Sbjct: 58 VHNETYVSQFCDGTLDDKSKRRIGLP----WSEGLVKRTC-----TAVGGTILTVQLALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N+ GG HH D G GFC + DI++ Y ++ +++++IIDLD HQG+G
Sbjct: 109 HGICCNLAGGTHHAFPDYGSGFCIFNDIAIASRYLLIEKIVNKILIIDLDVHQGDGTAFI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F D RV+ M +P
Sbjct: 169 FRDDERVFTFSMHCEANFP 187
>gi|254293275|ref|YP_003059298.1| histone deacetylase [Hirschia baltica ATCC 49814]
gi|254041806|gb|ACT58601.1| Histone deacetylase [Hirschia baltica ATCC 49814]
Length = 300
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P YD S + H F K+ + L G N P AS E+L H
Sbjct: 2 LPIVHHPLYDAS--SVSDKHRFPMRKYSLLPLKLMEAGLAYPNSFHLPELASAEELSAAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
S Y+ ++ S N+ + Q+K+ + + R G++LA KL
Sbjct: 60 SVQYVAAVLSG-NL-------------DRAAQKKLGFEWSIDVSNRARASAAGSLLAGKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A N GG HH D G GFC + D+++ + + RV+I+DLD H G+G
Sbjct: 106 ALKHGAAANTAGGSHHAGYDYGAGFCVFNDVAVAVLNMLNAKLVERVLIVDLDVHHGDGS 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRD 230
+ F++D RV+ M +PR+
Sbjct: 166 ARIFANDQRVFTFSMHCEDNWPRE 189
>gi|376316853|emb|CCG00233.1| histone deacetylase superfamily protein [uncultured Dokdonia sp.]
Length = 300
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 35/206 (16%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
PI+K PL + H F K+ + + L EG D N EP + + E +
Sbjct: 8 PIYKHPL-------------PEGHRFPMEKYDLLPKQLVYEGTCDANNFFEPTQVAHEHI 54
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
L H+ Y++SL++ + + P A QRK +P +++ GTI
Sbjct: 55 LRCHTTEYVESLKA-------LTIDPRA-------QRKTGFPLSQELVDRELIITQGTID 100
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A E G A+N+ GG HH D G FC D ++ Y +++I+DLD HQ
Sbjct: 101 GCHYALENGIAMNIAGGTHHAYTDHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQ 160
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYP 228
GNG + F+ D V+ M YP
Sbjct: 161 GNGTAEIFTGDDSVFTFSMHGKANYP 186
>gi|406706584|ref|YP_006756937.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
gi|406652360|gb|AFS47760.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
Length = 297
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++ DY F I H F +K+ + ++L + + + + P S E L H
Sbjct: 3 LPVVNHKDY---FAKIGDDHKFPINKFSELAKYLKEKKIVKE--FINPSPCSIETLSKAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
S Y+ +++ N ++ + FP + +V+R + GGT+L+AKLA + G
Sbjct: 58 SLDYINNIK---NKTLGKDGVKKIGFPLVDSVVKRSFI-----ATGGTVLSAKLAIKSGI 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ N GG HH + D G G+C + D+++ Y + ++++I+DLD HQGNG+ F
Sbjct: 110 SCNTAGGSHHANFDGGAGYCVFNDVAVAAKYLIERGLANKILIVDLDVHQGNGNADIFKD 169
Query: 213 DSRVYILDMFNPGIYP 228
D+ V+ M + YP
Sbjct: 170 DNHVFTFSMHSKTNYP 185
>gi|428201494|ref|YP_007080083.1| deacetylase [Pleurocapsa sp. PCC 7327]
gi|427978926|gb|AFY76526.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pleurocapsa sp. PCC 7327]
Length = 308
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + + H F SK+ + + L ++G +C+ P S+E + +
Sbjct: 1 MSLPIVYHPDY---IAPLPEGHRFPMSKFKLLYELLLADGIAQLDCVYRPEVPSRELIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ P I +P + L R + VGGTIL A+LA +
Sbjct: 58 VHLPEYVRAYCEGTLDPKAQRRIGLP----WSPALANRTCV-----AVGGTILTAQLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEK 208
G A N GG HH G GFC + D+++ QL + +V+I+DLD HQG+G
Sbjct: 109 YGLACNTAGGTHHAFPGYGSGFCIFNDLAIATR-VLQQLGLVKKVLIVDLDVHQGDGTAC 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYE 232
F D V+ M +P + +
Sbjct: 168 IFQDDPSVFTFSMHCEANFPNNKQ 191
>gi|90411556|ref|ZP_01219566.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium
profundum 3TCK]
gi|90327446|gb|EAS43799.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium
profundum 3TCK]
Length = 304
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 27/182 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV---EPLEASKEDLL 91
LPL+Y P Y S L + H + SK+ R+ Q+L+ +DK V +P + +++
Sbjct: 2 LPLVYHPIY--SQLDLPPAHRYPISKYRRLYQYLNDSLPIDKQTSVKFHQPNTLTSDNIK 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILA 143
+H+ Y+ +L I P A R++ +P+ +Q+ GT L
Sbjct: 60 RLHNSDYVDAL--------INNTLPAAKM------RRIGFPWSQQLIDRTLMSTAGTQLT 105
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+LA + G AI++ GG+HH D G GFC + D++L H+A + +VMI+D D H G
Sbjct: 106 VELAHQHGIAIHLSGGYHHAHHDFGSGFCLFNDLALAAHHALTLNGVDKVMIVDCDVHHG 165
Query: 204 NG 205
+G
Sbjct: 166 DG 167
>gi|333370018|ref|ZP_08462100.1| histone deacetylase [Psychrobacter sp. 1501(2011)]
gi|332968662|gb|EGK07715.1| histone deacetylase [Psychrobacter sp. 1501(2011)]
Length = 301
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP I + + H F K+ I + L EG L ++ P + S++++L H
Sbjct: 2 LKVAFSP---IFLYQVPEKHRFPMQKYRLIPERLVQEGTLSEDNFFAPSKVSEQEILTTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y L++ + P LV+R R T A AK+ G ++
Sbjct: 59 TAEYWDKLKTQALSRKEARAIGFEMTPE-LVERG-----RYIAHATYECALYAKQYGVSL 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
NV GG HH AD G GFC + D+ + + + ++R++I+DLD HQGNG+ +++
Sbjct: 113 NVAGGTHHSFADHGEGFCVFNDVCIASNLLLSRGEVNRILIVDLDVHQGNGNASIMANEP 172
Query: 215 RVYILDMFNPGIYP 228
RV++ M YP
Sbjct: 173 RVFVFSMHGEKNYP 186
>gi|359687906|ref|ZP_09257907.1| deacetylase [Leptospira licerasiae serovar Varillal str. MMD0835]
gi|418750973|ref|ZP_13307259.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
gi|418758793|ref|ZP_13314975.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114695|gb|EIE00958.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273576|gb|EJZ40896.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
Length = 335
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+L L+Y P+Y++ LG H F + K+ I + + L ++P +E+L +V
Sbjct: 40 RLALVYHPEYNMD-LGP---HVFPARKYAMIYNQVKEDPKLSSLPALQPAPVGEEELSLV 95
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ ++ + + ++ + + ++ F VGGTILA ++ + +
Sbjct: 96 HTPEFISDFMN-------LRYTDRTMYSELPLNQTMVRSFCLGVGGTILATEMTENYKYV 148
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +V+ IDLD HQGNG+ K F D
Sbjct: 149 YHIGGGFHHSMPDRAEGFCYLNDAAIAAKLYLQKHPERKVLFIDLDLHQGNGNAKIFHGD 208
Query: 214 SRVYILDMFNPGIYPR 229
V+ M +YP+
Sbjct: 209 PSVWTFSMHQEDLYPK 224
>gi|405971212|gb|EKC36062.1| hypothetical protein CGI_10022459 [Crassostrea gigas]
Length = 361
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+ I LP+I+ Y F H F K+ + +FL ++ + ++EP +
Sbjct: 47 MEINGLPIIHHDGYVCEF---PIRHRFAMRKFHGVLRFLKTDNVISMKQVLEPSAIDPDF 103
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
L +VH+ Y++ S N S+ + + +V R R + GGT+LA +LA E
Sbjct: 104 LKLVHTPDYVERFLSG-NTSVEEQRLTGFQWSTGIVSR-----CRLETGGTLLAGQLAME 157
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GGG HH G G+C D+++ F + + +V+I+DLD HQG+G
Sbjct: 158 HGIACSTGGGTHHAFPSHGAGYCLLNDLAVTAAVLFKECQVKKVLIVDLDVHQGDGTACI 217
Query: 210 FSSDSRVYILDMFNPGIYP 228
FS + V+ M + YP
Sbjct: 218 FSDNCAVFTFSMHSEKNYP 236
>gi|148242804|ref|YP_001227961.1| histone deacetylase family protein [Synechococcus sp. RCC307]
gi|147851114|emb|CAK28608.1| Histone deacetylase family protein [Synechococcus sp. RCC307]
Length = 306
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
++PL+Y P Y + H F +K+ ++ Q L+ +G + + +PL + L +
Sbjct: 3 IRVPLVYHPLYSAP---LPSSHRFPMAKFRQLRQCLADKGLAQEQQVHQPLPCPRRWLEL 59
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH Y ++ Q+ + + P LVQR L VGGT+ A+
Sbjct: 60 VHPRRYHQAFARGELDRQAQRRIGLPATQP--------LVQRTWL-----SVGGTLRTAQ 106
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + DI++ Q ++++M++DLD HQG+
Sbjct: 107 LALEHGMACHLAGGTHHAFPDYGSGFCIFNDIAVTASVLLQQGLVNKLMVVDLDVHQGDA 166
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
F+ + RV+ +P
Sbjct: 167 TAAIFTGEPRVFTFSAHAASNFP 189
>gi|83649181|ref|YP_437616.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83637224|gb|ABC33191.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 306
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K+PL+Y P+Y I H F K+ + +FL +EG L + P A++ED+ +
Sbjct: 3 KVPLVYHPEYSPE---IPAGHRFPMEKFRLLAEFLRAEGVLTDANLFTPEAATQEDIALA 59
Query: 94 HSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y++ + S I +P + + R + VGGT+L A+LA +
Sbjct: 60 HCADYVRDFRHGELSAKHMRQIGLP----WSEGVCTRTF-----RAVGGTLLTARLALKY 110
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G ++ GG HH D G GFC + D+++ SRV+IID D HQG+G +
Sbjct: 111 GLVAHLAGGTHHAHYDHGSGFCVFNDLAVAARVLVRGGEASRVLIIDCDVHQGDGTARIL 170
Query: 211 SSDSRVY 217
+ D ++
Sbjct: 171 TDDPDIF 177
>gi|148240071|ref|YP_001225458.1| histone deacetylase family protein [Synechococcus sp. WH 7803]
gi|147848610|emb|CAK24161.1| Histone deacetylase family protein [Synechococcus sp. WH 7803]
Length = 304
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K PL+Y Y + H F +K+ + + L G + PL + L +
Sbjct: 1 MKPPLVYHEAYSAP---LPSSHRFPMAKFRELERCLFECGLAHAGQMHRPLPVPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH SY ++ Q+ + + P LVQR L VGGT+L A+
Sbjct: 58 VHQRSYHEAFARDRLDRQAQRRIGLPATTP--------LVQRTWL-----AVGGTVLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA G A ++ GG HH + G GFC + D+++C Q + RV+++DLD HQG+
Sbjct: 105 LALRHGLACHLAGGTHHAFPNFGSGFCIFNDLAVCARVLIEQEGLQRVLVVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
FS D+RV+ L +P
Sbjct: 165 TALIFSGDARVFTLSAHAASNFP 187
>gi|295136397|ref|YP_003587073.1| histone deacetylase [Zunongwangia profunda SM-A87]
gi|294984412|gb|ADF54877.1| histone deacetylase family protein [Zunongwangia profunda SM-A87]
Length = 279
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K+ + + L EG ++ EP A ED+L VH++ Y+++L N+++
Sbjct: 2 EKYDLLPKQLLHEGTCEQQHFFEPKPADLEDILAVHTKEYVENL---TNLTLDRRAIRKT 58
Query: 119 LFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
FP LV R+++ GGT+ + A E G ++N+ GG HH +D G FC D
Sbjct: 59 GFPLSQELVDREIII-----AGGTLEGCQYALENGISMNIAGGTHHAYSDHGEAFCLLHD 113
Query: 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
++ Y + +++IIDLD HQGNG + F +D+ V+ M G YP
Sbjct: 114 QAIAARYLQKKKLAEKILIIDLDVHQGNGTAEIFQNDNSVFTFSMHGKGNYP 165
>gi|170744430|ref|YP_001773085.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168198704|gb|ACA20651.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 298
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P Y+ + + H F K+GR+ + L + G + N V P A + + H
Sbjct: 2 LPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PNGFVRPEPAGAPTVALAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ + ++ V +E + L + V R+ L GGT+LA +LA G A
Sbjct: 58 DRAYVDQVLTA-TVPRAVE-KRIGLPVDAGVARRSL----ASAGGTLLAGRLALAGGLAG 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GG HH GGGFC D+++ + I R ++IDLD HQG+G + +
Sbjct: 112 STAGGSHHARRAGGGGFCVLNDVAVAALALLREGAIRRALVIDLDVHQGDGTADCLAGEP 171
Query: 215 RVYILDMFNPGIYPRD 230
++ M YP D
Sbjct: 172 DLFTFSMHGERNYPTD 187
>gi|338530056|ref|YP_004663390.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337256152|gb|AEI62312.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 299
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L + G L + E + +EDL VH+ YL
Sbjct: 17 HRFPMEKYRLLREALLARGVLPPESLTESTPSPREDLARVHTPRYLD------------- 63
Query: 114 VPPVALFPNCLV---QRKVLYP--------FRKQVGGTILAAKLAKERGWAINVGGGFHH 162
ALF L QR++ +P F V GT+ AA+ A + G N+ GG HH
Sbjct: 64 ----ALFQGTLTEAEQRRLGFPWSPELVRRFAAAVAGTVDAARAALQDGIGGNLSGGTHH 119
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D G GFC + DI++ I +I R +++DLD HQGNG F+ D V+ M
Sbjct: 120 GFPDHGEGFCVFNDIAVAIRALQASRDIRRAVVVDLDVHQGNGTAAVFAGDDSVFTFSMH 179
Query: 223 NPGIYP 228
+P
Sbjct: 180 GENNFP 185
>gi|124006476|ref|ZP_01691309.1| histone deacetylase superfamily [Microscilla marina ATCC 23134]
gi|123987889|gb|EAY27569.1| histone deacetylase superfamily [Microscilla marina ATCC 23134]
Length = 300
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + PL ++E +L H Y + L+ N+ + +
Sbjct: 18 HRFPMEKYNLLPEQLLYEGIAEPDSFFAPLPVAEEWILKAHDPVYWQRLK---NLELSHK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV R+++ GTI A A E G ++N+ GG HH D G GF
Sbjct: 75 EARRTGFPLSAGLVHREIVI-----AQGTIDCALYALELGVSLNIAGGTHHAFTDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C DI++ HY + ++V++IDLD HQGNG + F D+RV+ M YP
Sbjct: 130 CLLNDIAIAAHYLLDKQLATKVLVIDLDVHQGNGTAEIFQYDNRVFTFSMHGAKNYP 186
>gi|343494601|ref|ZP_08732851.1| histone deacetylase superfamily protein [Vibrio nigripulchritudo
ATCC 27043]
gi|342825014|gb|EGU59525.1| histone deacetylase superfamily protein [Vibrio nigripulchritudo
ATCC 27043]
Length = 308
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 29/184 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSEG-FLDKNCIVEPLEASKED 89
+P+IY P Y S L + H + +K+ R + Q L + + + VEP S E
Sbjct: 2 IPVIYHPIY--SELSLPPKHRYPITKYRRLYENVVQTLEHDAQWREGLSFVEPTALSTEQ 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+L VH E Y++ L S E+P + R++ +P+ +Q+ GGT+
Sbjct: 60 VLEVHDEEYIQLLFSG-------EMPAAKM-------RRIGFPWSEQLITRTLTSAGGTV 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
AK A E G A+++ GG+HH D G GFC D+ L H A NI +V+I+D D H
Sbjct: 106 ETAKQAIEHGIALHLSGGYHHAHKDFGSGFCLINDLVLAAHEALKNENIDKVLIVDADVH 165
Query: 202 QGNG 205
G+G
Sbjct: 166 HGDG 169
>gi|257453627|ref|ZP_05618917.1| histone deacetylase family protein [Enhydrobacter aerosaccus SK60]
gi|257449085|gb|EEV24038.1| histone deacetylase family protein [Enhydrobacter aerosaccus SK60]
Length = 300
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
DI + + H F K+ I L +EG L + P S++++L H++ Y + L+
Sbjct: 8 DIFKYDVPERHRFPMQKYPMIAARLLAEGTLTQANFFAPQRLSEDEILTTHTQRYWQHLK 67
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ + P + + +V+ GT A AK+ G A+N+ GG HH
Sbjct: 68 QQTLPAKDARAIGFEMTPRLVERERVI------AHGTYECALFAKQFGVALNIAGGTHHA 121
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
AD G GFC + D+++ + + ++++ +DLD HQGNG +++ RV+ M
Sbjct: 122 FADHGEGFCVFNDVAVASNLLLARGQATQILTVDLDVHQGNGTAHLMANEPRVFTFSMHG 181
Query: 224 PGIYP 228
YP
Sbjct: 182 AKNYP 186
>gi|315125963|ref|YP_004067966.1| histone deacetylase [Pseudoalteromonas sp. SM9913]
gi|315014477|gb|ADT67815.1| histone deacetylase protein [Pseudoalteromonas sp. SM9913]
Length = 302
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I+EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-IIEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAYTAQTLIQNREVTNVLIFDLDVHQGDG 167
>gi|383937130|ref|ZP_09990540.1| histone deacetylase 11 [Rheinheimera nanhaiensis E407-8]
gi|383701793|dbj|GAB60631.1| histone deacetylase 11 [Rheinheimera nanhaiensis E407-8]
Length = 302
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY Y+I + LHPFD K+ ++ L+ D + I P + + +L
Sbjct: 1 MKIIYHEQYNIDVGIFKFLHPFDGCKFSKVRAALN-----DADIIAPPGPIAADAILGSL 55
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E L+ + +E+P + + ++L P R V GT+ A +LA A
Sbjct: 56 NELLKIQLKDKAALCRALEIPKIPFLSFSWLDSRILSPMRWGVSGTLTACRLALGGDDAW 115
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR---VMIIDLDAHQGNGHEKDFS 211
N+ GG+HH S GFC Y DI++ ++ ++IID+DAH GNG+ + F
Sbjct: 116 NLAGGYHHASPHRMEGFCIYNDINISYQQLIASGELTADDNILIIDIDAHHGNGNARTFI 175
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ +V +LD++N IYP D +RR ++ V +
Sbjct: 176 DNPKVTLLDVYNADIYPIDTISRRRVNIAVPL 207
>gi|83816178|ref|YP_446172.1| histone deacetylase/AcuC/AphA family protein [Salinibacter ruber
DSM 13855]
gi|294508098|ref|YP_003572156.1| histone deacetylase [Salinibacter ruber M8]
gi|83757572|gb|ABC45685.1| histone deacetylase/AcuC/AphA family protein [Salinibacter ruber
DSM 13855]
gi|294344426|emb|CBH25204.1| histone deacetylase [Salinibacter ruber M8]
Length = 307
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D ++ + + HPF +K+ + Q L E + +V P +A DL VH+ YL L
Sbjct: 7 DGYYVPLPEGHPFPMAKFPALHQRLLDEDLIRPTDVVAPRQADWTDLRRVHTADYLTHLA 66
Query: 104 S---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
S + + +P +++Y R V GTI AA +A G A N+ GG
Sbjct: 67 EGSLSDHAERRMGLP---------WSERLVYRSRLAVQGTINAALMALTDGVAANLAGGT 117
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH G GFC D+++ I RV+I+DLD HQGN + F+ D+ V+
Sbjct: 118 HHAFPGHGEGFCVLNDVAVAIRVLQAACWAQRVLIVDLDVHQGNANAAVFADDASVFTFS 177
Query: 221 MFNPGIYP 228
M YP
Sbjct: 178 MHGAKNYP 185
>gi|149371070|ref|ZP_01890665.1| histone deacetylase superfamily protein [unidentified eubacterium
SCB49]
gi|149355856|gb|EDM44414.1| histone deacetylase superfamily protein [unidentified eubacterium
SCB49]
Length = 300
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + Q+L +G + EP + S+ +L VH+E Y + L + + I+
Sbjct: 18 HRFPMAKYELLPQYLLDQGICTLDNFFEPQKVSEASILKVHTEDYYRRL-----LKLEID 72
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSA 165
V RK+ +P RK + GTI + A E G ++N GG HH A
Sbjct: 73 KKEV---------RKMGFPLRKALVDRGHYIIDGTIKGCEYAIEYGVSMNSAGGTHHAYA 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G FC D ++ + + L I++ V+I+DLD HQGNG K F +D RV+ M
Sbjct: 124 DHGEAFCLLNDQAVAARH-LLDLGIAKQVLIVDLDVHQGNGTAKIFENDDRVFTFSMHGA 182
Query: 225 GIYP 228
YP
Sbjct: 183 KNYP 186
>gi|359437703|ref|ZP_09227758.1| histone deacetylase [Pseudoalteromonas sp. BSi20311]
gi|359445306|ref|ZP_09235050.1| hypothetical protein P20439_1372 [Pseudoalteromonas sp. BSi20439]
gi|358027642|dbj|GAA64007.1| histone deacetylase [Pseudoalteromonas sp. BSi20311]
gi|358040872|dbj|GAA71299.1| hypothetical protein P20439_1372 [Pseudoalteromonas sp. BSi20439]
Length = 302
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-ITEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAFTAQTLIQNREVTNVLIFDLDVHQGDG 167
>gi|392556279|ref|ZP_10303416.1| histone deacetylase [Pseudoalteromonas undina NCIMB 2128]
Length = 302
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-ITEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAFTAQTLIQNREVTNVLIFDLDVHQGDG 167
>gi|149199017|ref|ZP_01876057.1| histone deacetylase superfamily protein [Lentisphaera araneosa
HTCC2155]
gi|149137806|gb|EDM26219.1| histone deacetylase superfamily protein [Lentisphaera araneosa
HTCC2155]
Length = 300
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
HPF K+ + + + +G ++K+ EP S+ED+L+ HS Y L LQ S
Sbjct: 18 HPFPMEKYELLWRQILYQGIIEKDQYFEPKAISEEDILLCHSSEYWNKLNQLQLSDK--- 74
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
EV + FP + R ++ GGT+ + A E +N+ GG HH +D G G
Sbjct: 75 --EVKKIG-FP---LSRDLVNRELDITGGTLELSLWALENACGLNIAGGTHHAFSDHGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+C D ++ I + I R +I+DLD HQGNG + F++D+ V+ L + YP
Sbjct: 129 YCLLNDHAIAIRALQNRRLIKRALIVDLDVHQGNGSAEIFANDASVFTLSIHGERNYPTK 188
Query: 231 YE 232
E
Sbjct: 189 KE 190
>gi|148653959|ref|YP_001281052.1| histone deacetylase superfamily protein [Psychrobacter sp. PRwf-1]
gi|148573043|gb|ABQ95102.1| histone deacetylase superfamily [Psychrobacter sp. PRwf-1]
Length = 302
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ I + L +EG L ++ P + S+ ++L H
Sbjct: 2 LKIAFSPIY---LYDVPEKHRFPMQKYRLIPERLLAEGTLTQDNFFAPDKVSEAEILTTH 58
Query: 95 SESYLKSL--QSSPNV---SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y L Q+ P +I E+ P LV+R R T A AK+
Sbjct: 59 TPEYWDKLKTQTLPRKEARAIGFEMTPQ------LVERG-----RYIAHATYECALYAKQ 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G ++NV GG HH AD G GFC + D+ + + + S+++I+DLD HQGNG+
Sbjct: 108 YGVSLNVAGGTHHAFADHGEGFCVFNDVCIASNLLLSRGQASKILIVDLDVHQGNGNASI 167
Query: 210 FSSDSRVYILDMFNPGIYP 228
+++ RV++ M YP
Sbjct: 168 MANEPRVFVFSMHGEKNYP 186
>gi|406663291|ref|ZP_11071352.1| Acetoin utilization protein AcuC [Cecembia lonarensis LW9]
gi|405552606|gb|EKB47991.1| Acetoin utilization protein AcuC [Cecembia lonarensis LW9]
Length = 300
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG ++ + EP +E +L H Y + L+ N+S+
Sbjct: 18 HRFPMEKYNLLPEQLMYEGTVNSSNFFEPEALDREWILNTHHAEYFQKLE---NLSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + G++ AA A + G A+N+ GG HH +D G GF
Sbjct: 75 EIRRTGFPLSKALVEREI-----HIMHGSVQAALFALQYGVAMNIAGGTHHAFSDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ +Y + +++++DLD HQGNG + F +S+V+ M YP
Sbjct: 130 CLLNDIAITANYLLEKKLAGQILVVDLDVHQGNGTAEIFRQESKVFTFSMHGAANYPMHK 189
Query: 232 E 232
E
Sbjct: 190 E 190
>gi|126660711|ref|ZP_01731810.1| histone deacetylase/AcuC/AphA family protein [Cyanothece sp.
CCY0110]
gi|126618009|gb|EAZ88779.1| histone deacetylase/AcuC/AphA family protein [Cyanothece sp.
CCY0110]
Length = 305
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y Y + + H F K+ + + L E + N I P K L +
Sbjct: 1 MNLPIVYHDQYVVP---LPDGHRFPMEKFSLLYELLLREKVVKSNNIYTPECPEKSLLEL 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ + S V I +P + LV+R + VGGTIL AKLA +
Sbjct: 58 VHCPDYITAYCQGTLSDKVQRRIGLP----WSEALVKRTCV-----AVGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH D G GFC + D+++ + V+IIDLD HQG+G K
Sbjct: 109 FGLACNTAGGTHHAFPDYGSGFCIFNDLAIATRVLQKLKLVKTVLIIDLDVHQGDGTAKI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYE 232
F +D V+ M +PR+ +
Sbjct: 169 FQNDLTVFTFSMHCEANFPREKQ 191
>gi|418738197|ref|ZP_13294593.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410746371|gb|EKQ99278.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 270
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK+ S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKNFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F DS V+ M +YP+
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK 160
>gi|375013620|ref|YP_004990608.1| deacetylase [Owenweeksia hongkongensis DSM 17368]
gi|359349544|gb|AEV33963.1| deacetylase, histone deacetylase/acetoin utilization protein
[Owenweeksia hongkongensis DSM 17368]
Length = 300
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YSP Y + H F K+ I + L EG ++ P + S++ +L H
Sbjct: 2 LKIAYSPIYHHP---LPPGHRFPMVKYSLIPEQLLYEGTCSEDNFFTPEKLSEKQILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y + L+++ L P LV+R++ GTI AK A E G ++
Sbjct: 59 TAEYWEKLKTNSLTRQEERKTGFPLTPK-LVEREITI-----CQGTIDNAKHALEHGISM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH A+ G GFC DI L H+ +++++DLD HQGNG K ++S
Sbjct: 113 NIAGGTHHAYANSGEGFCLLNDICLASHWLLDNNLAKQILVVDLDVHQGNGTAKIMENES 172
Query: 215 RVYILDMFNPGIYPRDYEA 233
RV+ M YP E+
Sbjct: 173 RVFTFSMHGEKNYPMHKES 191
>gi|363580001|ref|ZP_09312811.1| histone deacetylase [Flavobacteriaceae bacterium HQM9]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS 109
++K H F K+ + + L EG K EP SK DLL VH++ Y+++L +++
Sbjct: 14 LKKGHRFPMEKYDLLPKQLLHEGTCTKENFFEPGVVSKTDLLRVHTKEYIQNLT---DLN 70
Query: 110 IIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
+ FP LV+R+ + GTI AAK A + G A+N+ GG HH ++
Sbjct: 71 LPKTEARAIGFPLSAALVEREFVI-----TQGTIDAAKFALQHGIAMNIAGGTHHAFSNR 125
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G FC D ++ Y +++I+DLD HQGNG + F + + V+ M Y
Sbjct: 126 GEAFCLLNDQAVAAAYLLHYQLAKKILIVDLDVHQGNGTAEIFQNQANVFTFSMHGEKNY 185
Query: 228 P 228
P
Sbjct: 186 P 186
>gi|421092686|ref|ZP_15553418.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410364537|gb|EKP15558.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|456889867|gb|EMG00737.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200701203]
Length = 270
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F DS V+ M +YP+
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK 160
>gi|379729191|ref|YP_005321387.1| histone deacetylase [Saprospira grandis str. Lewin]
gi|378574802|gb|AFC23803.1| histone deacetylase [Saprospira grandis str. Lewin]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ + Q L EG L++ P ++E +L H
Sbjct: 2 LKVAFSPIYRYE---LPQGHRFPMIKYDLLAQQLIYEGCLEEENFFHPQPIAEEWILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQR-KVLYPFRKQVGGTILAAKLAKERG 151
S+ Y SL+ +I + FP LVQR KV+ GTI A+E G
Sbjct: 59 SKDYWDSLKKQ---TISAKAARKIGFPMSEKLVQRSKVI------AQGTIDCCLAAQEYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
++N+ GG HH A G GFC D ++ +Y Q +++I+DLD HQGNG K F
Sbjct: 110 VSLNIAGGTHHAYASHGEGFCLLNDFAIAANYLLDQGLAQQILIVDLDVHQGNGSAKIFE 169
Query: 212 SDSRVYILDMFNPGIYP 228
++ RV+ M YP
Sbjct: 170 NEPRVFTFSMHAAANYP 186
>gi|418720651|ref|ZP_13279847.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|410742925|gb|EKQ91670.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
Length = 270
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F DS V+ M +YP+
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK 160
>gi|88809136|ref|ZP_01124645.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 7805]
gi|88787078|gb|EAR18236.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 7805]
Length = 304
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K PL+Y Y + H F +K+ + + L G D + + PL + L +
Sbjct: 1 MKPPLVYHEAYSAP---LPSSHRFPMAKFRELERCLFDCGLADSSQMHRPLPVPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH +Y ++ Q+ + + P LV+R + VGGT+L A+
Sbjct: 58 VHQRAYHEAFARDRLDRQAQRRIGLPATTP--------LVRRTWI-----AVGGTLLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA G A ++ GG HH D G GFC + D+++C Q + RV+++DLD HQG+
Sbjct: 105 LALRHGLACHLAGGTHHAFPDFGSGFCIFNDLAVCARVLIEQDGLQRVLVVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
FS D RV+ +P
Sbjct: 165 TALIFSGDERVFTFSAHAASNFP 187
>gi|421098269|ref|ZP_15558940.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
gi|410798537|gb|EKS00626.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
Length = 270
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ +P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYKPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTEKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F DS V+ M +YP+
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK 160
>gi|424842887|ref|ZP_18267512.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saprospira grandis DSM 2844]
gi|395321085|gb|EJF54006.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saprospira grandis DSM 2844]
Length = 300
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ + Q L EG L++ +P ++E +L H
Sbjct: 2 LKVAFSPIYRYE---LPQGHRFPMIKYDLLAQQLIYEGCLEEENFFQPQPIAEEWILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQR-KVLYPFRKQVGGTILAAKLAKERG 151
S+ Y +L+ +I + FP LVQR KV+ GTI A+E G
Sbjct: 59 SKDYWDALKEQ---TISAKAARKIGFPMSEKLVQRSKVI------AQGTIDCCLAAQEYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
++N+ GG HH A G GFC D ++ +Y Q +++I+DLD HQGNG K F
Sbjct: 110 VSLNIAGGTHHAYASHGEGFCLLNDFAIAANYLLDQGLAQQILIVDLDVHQGNGSAKIFE 169
Query: 212 SDSRVYILDMFNPGIYP 228
++ RV+ M YP
Sbjct: 170 NEPRVFTFSMHAAANYP 186
>gi|332291650|ref|YP_004430259.1| histone deacetylase [Krokinobacter sp. 4H-3-7-5]
gi|332169736|gb|AEE18991.1| Histone deacetylase [Krokinobacter sp. 4H-3-7-5]
Length = 300
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 35/206 (16%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
PI+K PL + H F K+ + + L EG ++ EP+E E +
Sbjct: 8 PIYKHPL-------------PEGHRFPMEKYDLLPKQLVYEGTCTEDNFFEPVEVDNEHI 54
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
+ H+ Y++SL++ + + P A QRK +P +++ GTI
Sbjct: 55 VRCHTTEYVESLKA-------LTIDPRA-------QRKTGFPLSQELVDRELIITQGTID 100
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A E G A+N+ GG HH D G FC D ++ Y +++I+DLD HQ
Sbjct: 101 GCHYALENGIAMNIAGGTHHAYTDHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQ 160
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYP 228
GNG + F+ D V+ M YP
Sbjct: 161 GNGTAEIFTGDDSVFTFSMHGKANYP 186
>gi|392549858|ref|ZP_10296995.1| histone deacetylase [Pseudoalteromonas spongiae UST010723-006]
Length = 302
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF ++ H F SK+ R+ Q+L S+G++++ + +P + + +V
Sbjct: 5 NLPLVYHPNYSFSF---DEKHRFVMSKFARLYQYLDSKGYINQRNLYQPPVGDFKPMELV 61
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H ESY+ L Q I +P + L+ R P GT LAA+LA E
Sbjct: 62 HCESYVHDLFHNQLDSKAMRRIGLP----WSEQLMARTFTAPL-----GTHLAAELALEH 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D G G+C D++ + V+I D D HQG+G
Sbjct: 113 GIACHLAGGTHHAHYDFGSGYCMVNDLAYTATRLINEGKARNVLIFDCDVHQGDG 167
>gi|359728114|ref|ZP_09266810.1| deacetylase [Leptospira weilii str. 2006001855]
gi|417781407|ref|ZP_12429159.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
gi|410778658|gb|EKR63284.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
Length = 270
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ +P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYKPEPARDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L + + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTGKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQKAYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F DS V+ M +YP+
Sbjct: 130 DLHQGNGNSVIFQEDSNVFTFSMHQENLYPK 160
>gi|357027929|ref|ZP_09089984.1| Deacetylase [Mesorhizobium amorphae CCNWGS0123]
gi|355540174|gb|EHH09395.1| Deacetylase [Mesorhizobium amorphae CCNWGS0123]
Length = 300
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + LS+ G + P A L +
Sbjct: 1 MSLQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALSTRGLARPGTLNLPEPAPAYWLKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQV--GGTILAA 144
H+ Y++ + + EVP ++R++ +P R Q+ GGT+ AA
Sbjct: 58 AHAPDYVEQV-------LACEVPET-------IEREIGFPVGPRVSLRAQLATGGTVQAA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA + G A N GG HH +G GFC + D+++ + + ++++DLD HQG+
Sbjct: 104 RLALQHGIACNAAGGSHHARRAQGAGFCTFNDVAVASLVLLAEGAVQNILVVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G + R + M YP
Sbjct: 164 GTADILKDEPRAFTFSMHGDRNYP 187
>gi|303290877|ref|XP_003064725.1| histone deacetylase [Micromonas pusilla CCMP1545]
gi|226453751|gb|EEH51059.1| histone deacetylase [Micromonas pusilla CCMP1545]
Length = 385
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
LP++Y P Y S + H F + + + + L EG KN S+E+LL
Sbjct: 80 LPIVYHPSY--SKPALPTGHRFPMTVFKALYERLIREGVAVPGKNLFQPARAPSREELLA 137
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H E+Y+ + S I +P + LV+R + +V GTIL A LA
Sbjct: 138 AHCETYVDAFCVGALDDGASRKIGLP----WSEDLVERTL-----HEVSGTILTADLALT 188
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A+N GG HH G GFC D+++ + + RV+I+DLD HQG+G
Sbjct: 189 CGMAMNTAGGTHHAHRAHGSGFCILNDLAVTAKRVLQRGAVERVLIVDLDVHQGDGTAAI 248
Query: 210 FSSDSRVYILDMFNPGIYP 228
D RV++LD +P
Sbjct: 249 VEDDDRVFVLDAHCADNFP 267
>gi|118589342|ref|ZP_01546748.1| hypothetical protein SIAM614_07353 [Stappia aggregata IAM 12614]
gi|118438042|gb|EAV44677.1| hypothetical protein SIAM614_07353 [Labrenzia aggregata IAM 12614]
Length = 309
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ P Y + H F K+ + + + EG L N P A E + +
Sbjct: 1 MTLPIVHHPAYCAD---LPANHRFPMDKFRAVAELIRREGLLSDNAFFRPRPAPFEWVAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAA 144
H +Y+ + ++ VP + R++ +P R+ + GGT+L
Sbjct: 58 AHEPAYVDQVFNA-------RVPDK-------IAREIGFPMREDIALRARCATGGTVLTG 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A N GG HH G GFC + D+++ I I ++IDLD HQG+
Sbjct: 104 YLALEHGIACNTAGGSHHARRAHGAGFCVFNDVAVAIKVLQADGAIRTALVIDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G F D V+ + + YP
Sbjct: 164 GTADIFQGDPNVFTFSLHSEKNYP 187
>gi|392310191|ref|ZP_10272725.1| histone deacetylase [Pseudoalteromonas citrea NCIMB 1889]
Length = 302
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ + ++ +G + N + +P + L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFANLYHYVQQQGLITNN-LYQPELGAPSHLELV 61
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H ESYL L Q S V I +P + L+ R P GT+ A+LA E
Sbjct: 62 HCESYLWDLWHNQLSDKVMRRIGLP----WSEALMARTFTAPL-----GTLKTAELALEH 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GIACHLAGGTHHAHYDFGSGFCMVNDLAFTATTLVKNKKVNNVLIFDLDVHQGDGTAAML 172
Query: 211 SSDSRVY 217
D V+
Sbjct: 173 KHDPYVF 179
>gi|226228541|ref|YP_002762647.1| histone deacetylase family protein [Gemmatimonas aurantiaca T-27]
gi|226091732|dbj|BAH40177.1| histone deacetylase family protein [Gemmatimonas aurantiaca T-27]
Length = 311
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + +EG + + + +P A +EDL VH+ Y+ ++
Sbjct: 18 HRFPMDKYRLLREAVLAEGLVAPDRVHDPQRALEEDLRRVHTVDYVAQIRDG-------- 69
Query: 114 VPPVALFPNCLVQRKVLYPFR--------KQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
P A QR++ P+ + V GTI A+ A G A+N+ GG HH
Sbjct: 70 TLPAA------EQRRIGLPWSPSFVERAFRVVQGTIEASACALREGLAMNLAGGTHHAFP 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC + D+++ + + + RV I+DLD HQGNG F+ D +V+ M
Sbjct: 124 DRGEGFCTFNDVAVAVRRLQAEGAVQRVAIVDLDVHQGNGTHGCFAGDEQVFTFSMHGAK 183
Query: 226 IYP 228
+P
Sbjct: 184 NFP 186
>gi|384250439|gb|EIE23918.1| Arginase/deacetylase, partial [Coccomyxa subellipsoidea C-169]
Length = 304
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEG---FLDKNCIVEPLEASKEDLLVVHSESYLKSL---Q 103
+E+ H F SK+ R+ + L+ EG D I E +A++EDL + H Y++ Q
Sbjct: 18 LEEKHRFPMSKY-RLTR-LALEGDATVKDLLEIREAPQATEEDLALAHDPGYVRRFFEGQ 75
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI----NVGGG 159
P I P + LV+R R GGT+ A + E W + N+ GG
Sbjct: 76 LGPKEMRSIGFP----WSEGLVRRA-----RASAGGTLAATRALLE--WQLPFTANIAGG 124
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH A G GFC + DI++ A + I +V++IDLD HQGNG F+ D RV
Sbjct: 125 THHAFAGRGEGFCVFNDIAVSARMAMTEEGIEKVLVIDLDVHQGNGTSAIFAQDDRVTTF 184
Query: 220 DMFNPGIYP 228
D+ YP
Sbjct: 185 DVHGDKNYP 193
>gi|434387387|ref|YP_007097998.1| deacetylase, histone deacetylase/acetoin utilization protein
[Chamaesiphon minutus PCC 6605]
gi|428018377|gb|AFY94471.1| deacetylase, histone deacetylase/acetoin utilization protein
[Chamaesiphon minutus PCC 6605]
Length = 305
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P++Y PDY + + H F SK+ + + L ++G + P E L +
Sbjct: 1 MSVPIVYHPDYVVP---LPDSHRFPMSKFRILYELLLADGLVTTEQTFAPTLPPTEWLEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ + P I +P + LV R + +GG+IL AKLA E
Sbjct: 58 VHDPAYIQAYYTGTLDPKAQRRIGLP----WSPELVNRTCI-----ALGGSILTAKLAIE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEK 208
G A N GG HH A+ G GFC + D+++ +L ++ +++I+DLD HQG+G
Sbjct: 109 HGIACNTAGGTHHAFANMGSGFCIFNDLAIASR-VIQKLGLAKKILIVDLDVHQGDGTAA 167
Query: 209 DFSSDSRVYILDM 221
F D V+ M
Sbjct: 168 IFQRDPSVFTFSM 180
>gi|427735530|ref|YP_007055074.1| deacetylase [Rivularia sp. PCC 7116]
gi|427370571|gb|AFY54527.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rivularia sp. PCC 7116]
Length = 305
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F K+ + + L S+G D P ++E + +VH
Sbjct: 3 LPIIYHPDY---VTPLPDAHRFPMPKFRLLYELLLSDGVADLQQFHIPKRPNQEAIELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
++ ++ + + QR++ P+ Q VGGTILAAKL
Sbjct: 60 TKEFVNGYLNGTL--------------DTKAQRRIGLPWSPQLVNRTCTAVGGTILAAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
A +G A N GG HH G GFC + D ++ +LN++ +++I+DLD HQG+G
Sbjct: 106 ALSKGLACNTAGGTHHAFPSYGSGFCIFNDFAIATR-VIQKLNLAQKILIVDLDVHQGDG 164
Query: 206 HEKDFSSDSRVYILDM 221
F D V+ M
Sbjct: 165 TAFIFQDDDSVFTFSM 180
>gi|347539598|ref|YP_004847023.1| histone deacetylase superfamily protein [Pseudogulbenkiania sp.
NH8B]
gi|345642776|dbj|BAK76609.1| histone deacetylase superfamily protein [Pseudogulbenkiania sp.
NH8B]
Length = 312
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPL-EASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F + K+ + + + EGF ++EP A+ +L VH +Y+ +L
Sbjct: 17 HRFPAEKYRLLAE--AVEGFALH--LLEPAPAATPAELCRVHDAAYVHALLEG------- 65
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCS 164
+P A QR++ P+ Q VG TI AA++A +G +N+ GG HH
Sbjct: 66 SLPERA-------QREIGLPWSPQLVARACHSVGATIAAARVALLQGCGVNLAGGTHHAQ 118
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
AD+G GFC + D+++ + +I R ++IDLD HQGNG F D+RV+ M
Sbjct: 119 ADKGSGFCVFNDVAVAARLLLDEGHIRRALVIDLDVHQGNGTAALFRDDARVFTFSMHGQ 178
Query: 225 GIYP 228
+P
Sbjct: 179 NNFP 182
>gi|381393718|ref|ZP_09919437.1| histone deacetylase/AcuC/AphA family protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330612|dbj|GAB54570.1| histone deacetylase/AcuC/AphA family protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 299
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L + G + +N + P EDL V H
Sbjct: 2 IPLVFHPIY--SQLPLPPKHRFPIEKYQGIKDQLLANG-VSENAFLTPEAIPLEDLKVAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
S Y+ S I R++ P+ +Q VGGT+L +KL
Sbjct: 59 SAKYVDSFIDGTISQKAI--------------RRLGMPWSQQFVKRTLHAVGGTVLTSKL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH +D G GFC + DI L + Q I +V+ D D HQG+G
Sbjct: 105 ALEHGLALNLTGGYHHAFSDFGSGFCVFNDIVLSATHMLKQEGIDKVLTFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
S + +Y + + +P
Sbjct: 165 ALLASGNDAIYTVSLHCEKNFP 186
>gi|345301994|ref|YP_004823896.1| histone deacetylase [Rhodothermus marinus SG0.5JP17-172]
gi|345111227|gb|AEN72059.1| Histone deacetylase [Rhodothermus marinus SG0.5JP17-172]
Length = 378
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y PDY G E HPF + + L + G + P EA++E++L VH
Sbjct: 2 VPVVYHPDYLTYCFGPE--HPFSPVRLEMLWTLLEALGC--APTPIRPPEATREEVLRVH 57
Query: 95 SESYLKSLQSSPNVSII-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+E Y+ ++++ + ++ P V +FP+ +VL VGGT+ A+L
Sbjct: 58 AEDYVARVEAASRGEYVPDAEAFGLDTPDVPVFPDMDRAARVL------VGGTLHGARLI 111
Query: 148 KERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
E G A + +GGGFHH GFC Y D+S+ I A + RV ID+D H G+
Sbjct: 112 AE-GRAPTVLQLGGGFHHAHPARASGFCVYNDLSIAIR-ALTDAGL-RVAYIDIDVHHGD 168
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + + V + + G Y
Sbjct: 169 GVQAIHYREDTVLTISLHETGQY 191
>gi|81300202|ref|YP_400410.1| histone deacetylase/AcuC/AphA family protein-like protein
[Synechococcus elongatus PCC 7942]
gi|81169083|gb|ABB57423.1| histone deacetylase/AcuC/AphA family protein-like [Synechococcus
elongatus PCC 7942]
Length = 304
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y + H F +K+ + L E + +P E L VH
Sbjct: 3 LPLVYHPGYSAP---LPSTHRFPMAKFRLLHDRLLRERVVYPQQFHQPDRPPLEWLTSVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
S Y+++ + + P LV+R + VGGTIL A+LA ++G A
Sbjct: 60 SLDYIQAYSQGTLDERSLRRIGLPWSP-ALVERTWI-----AVGGTILTARLALQQGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F D
Sbjct: 114 NLAGGTHHAFPDYGSGFCIFNDCAIAARLLLQERLVERILIVDLDVHQGDGTAWIFQDDP 173
Query: 215 RVYILDMFNPGIYP 228
RV+ M +P
Sbjct: 174 RVFTFSMHCEANFP 187
>gi|56750171|ref|YP_170872.1| histone deacetylase/AcuC/AphA family protein [Synechococcus
elongatus PCC 6301]
gi|56685130|dbj|BAD78352.1| similar to histone deacetylase/AcuC/AphA family protein
[Synechococcus elongatus PCC 6301]
Length = 304
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y P Y + H F +K+ + L E + +P E L
Sbjct: 1 MDLPLVYHPGYSAP---LPSTHRFPMAKFRLLHDRLLRERVVYPQQFHQPDRPPLEWLTS 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VHS Y+++ + + P LV+R + VGGTIL A+LA ++G
Sbjct: 58 VHSLDYIQAYSQGTLDERSLRRIGLPWSP-ALVERTWI-----AVGGTILTARLALQQGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N+ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F
Sbjct: 112 ACNLAGGTHHAFPDYGSGFCIFNDCAIAARLLLQERLVERILIVDLDVHQGDGTAWIFQD 171
Query: 213 DSRVYILDMFNPGIYP 228
D RV+ M +P
Sbjct: 172 DPRVFTFSMHCEANFP 187
>gi|186686128|ref|YP_001869324.1| histone deacetylase superfamily protein [Nostoc punctiforme PCC
73102]
gi|186468580|gb|ACC84381.1| histone deacetylase superfamily [Nostoc punctiforme PCC 73102]
Length = 305
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F SK+ ++ + L ++G ++ P E + +VH
Sbjct: 3 LPIIYHPDY---IAPLPEGHRFPMSKFRQLYELLLADGVANQEQFHTPERPPPELIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ SY+++ P + I +P + L R + VGGTIL AKLA G
Sbjct: 60 TPSYVQAYCEGTLDPKLQRRIGLP----WSPALANRTCV-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKFGLVQKILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDM 221
D V+ M
Sbjct: 171 DDDSVFTFSM 180
>gi|227539670|ref|ZP_03969719.1| possible histone deacetylase [Sphingobacterium spiritivorum ATCC
33300]
gi|227240312|gb|EEI90327.1| possible histone deacetylase [Sphingobacterium spiritivorum ATCC
33300]
Length = 334
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
H F K+ I L EG + K+ EP S+E + H ESY++ L + + + +I
Sbjct: 51 HRFPMLKYELIPMQLIHEGLVSKDSFFEPELISEEIACLAHDESYVRDLFELTLDARMIR 110
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP + L++R+ R V GTI A A + G A NV GG HH G G
Sbjct: 111 RIG----FPLTDSLIRRE-----RLIVDGTIRTALFAMQYGIAFNVAGGTHHAGHAYGEG 161
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D ++ Y + + +++IIDLD HQGNG F V+ M +P
Sbjct: 162 FCLLNDQAIAAAYLLAEQKVHKILIIDLDVHQGNGTANIFKGSKEVFTFSMHGAKNFP 219
>gi|428774306|ref|YP_007166094.1| histone deacetylase [Cyanobacterium stanieri PCC 7202]
gi|428688585|gb|AFZ48445.1| Histone deacetylase [Cyanobacterium stanieri PCC 7202]
Length = 303
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + + H F K+ + + L +G +PL AS E L +
Sbjct: 1 MNLPVVYHADYVTP---LPQEHRFPMPKFKLLYELLLKDGITSPTLTHQPLIASAEILQL 57
Query: 93 VHSESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y++ S + + I +P + LV+R V GTIL A+LA +
Sbjct: 58 VHHPHYVEQYCNGSLDTKALRRIGLP----WSEGLVKRTC-----TAVAGTILTAQLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N GG HH + G GFC + D+++ Y + +++I+DLD HQG+G
Sbjct: 109 YGLCCNTAGGTHHAFPEYGSGFCIFNDLAIASKYLLEHQLVEKILIVDLDVHQGDGTAYT 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F+ + RV+ M +P
Sbjct: 169 FAHEPRVFTFSMHCEANFP 187
>gi|443321291|ref|ZP_21050349.1| deacetylase, histone deacetylase/acetoin utilization protein
[Gloeocapsa sp. PCC 73106]
gi|442788980|gb|ELR98655.1| deacetylase, histone deacetylase/acetoin utilization protein
[Gloeocapsa sp. PCC 73106]
Length = 303
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y PDY + + + H F SK+ ++ + L ++ D+N P +E L +
Sbjct: 1 MNLPLVYHPDYVVP---LPQGHRFPMSKFKQLYELLLAQEITDRNSTYTPEMPKREWLQL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ +L + I + + + C+ V GT+L A+LA
Sbjct: 58 VHTNDYVEAYCNGTLDAKSVRRIGLPCSEMLIKRTCIA-----------VAGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ G N GG HH G GFC + D+++ Q + +++I+DLD HQG+G
Sbjct: 107 LKLGICCNCAGGTHHAFPSFGSGFCIFNDLAIASQVLLQQKLVKKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYP 228
F + V+ M +P
Sbjct: 167 FIFQDNPAVFTFSMHCEANFP 187
>gi|400288975|ref|ZP_10791007.1| histone deacetylase superfamily protein [Psychrobacter sp. PAMC
21119]
Length = 305
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YS DI + + H F K+ I + L +EG + P S+E++L H
Sbjct: 2 LKIAYS---DIFRYAVPEKHRFPMQKYTMIPERLLAEGTISMVNFFAPARLSEEEILTTH 58
Query: 95 SESYLKSL--QSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y L Q+ P E P+ LV R R T A A++ G
Sbjct: 59 TMDYWYKLKTQTLPRK----EARPIGFEMTEALVDRG-----RHIAHATYECALYAQQYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+NV GG HH AD G GFC + D+ + + + +++++DLD HQGNG+ +
Sbjct: 110 VAMNVAGGTHHAFADHGEGFCVFNDVCIASNLLLNRGQAQKILVVDLDVHQGNGNASIMA 169
Query: 212 SDSRVYILDMFNPGIYP 228
++ RV++ M YP
Sbjct: 170 NEPRVFVFSMHGAKNYP 186
>gi|108759310|ref|YP_629630.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108463190|gb|ABF88375.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 299
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L G L + E ++DL VH+ YL +L
Sbjct: 17 HRFPMEKYRLLREALLERGVLTPESLTESTPCPRQDLARVHTPRYLDALSQGTLTDA--- 73
Query: 114 VPPVALFPNCLVQRKVLYP--------FRKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
QR++ +P F V GT+ AA+ A + G N+ GG HH
Sbjct: 74 -----------EQRRLGFPWSPELMRRFSAAVAGTLDAARAALQDGIGGNLSGGTHHGFP 122
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC + DI++ I +I R +++DLD HQGNG F+ D V+ M
Sbjct: 123 DHGEGFCVFNDIAVAIRVLQASRDIRRAVVVDLDVHQGNGTAAVFTGDDSVFTFSMHGEN 182
Query: 226 IYP 228
+P
Sbjct: 183 NFP 185
>gi|320104431|ref|YP_004180022.1| histone deacetylase [Isosphaera pallida ATCC 43644]
gi|319751713|gb|ADV63473.1| Histone deacetylase [Isosphaera pallida ATCC 43644]
Length = 309
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D L + + H F K+ + Q + + D+ ++EP AS DL VH Y++ +
Sbjct: 14 DRYTLPLPEWHRFPMRKYALLRQQVERAAWSDRVRLLEPPAASDADLERVHDPGYVRRVA 73
Query: 104 SS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
+ P I +P + LV+R R+ GGTI AA+ A E ++N+ GG
Sbjct: 74 TGGLRPEEEREIGLP----WSEGLVERS-----RRSTGGTIAAARAALEDFASVNLAGGT 124
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH +G G+C + D ++ + + RV+I+D D H G+G F+ D RV+
Sbjct: 125 HHAHVHKGAGYCVFNDAAVAARALLAEGRVERVVILDCDVHHGDGTAAIFADDPRVFTYS 184
Query: 221 MFNPGIYP 228
+ + YP
Sbjct: 185 IHSAKNYP 192
>gi|319953397|ref|YP_004164664.1| histone deacetylase [Cellulophaga algicola DSM 14237]
gi|319422057|gb|ADV49166.1| Histone deacetylase [Cellulophaga algicola DSM 14237]
Length = 300
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + Q L EG K EP + + +L VH Y L N+ I +
Sbjct: 18 HRFPMAKYDLLPQQLIYEGTCKKENFFEPEIPNDKYILAVHDAEYYYDLL---NIKIDQK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+ R GGTI + A E G A+N+ GG HH +D G F
Sbjct: 75 AARKIGFPLSEDLIERE-----RIITGGTIKGCEFAIENGVAMNLAGGTHHAYSDHGEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D S+ Y + ++++I+DLD HQGNG + F +D+ V+ M YP
Sbjct: 130 CMLNDQSIGARYLQAKKLAAQILIVDLDVHQGNGTAEIFQNDTSVFTFSMHGESNYPFRK 189
Query: 232 EA 233
EA
Sbjct: 190 EA 191
>gi|428224317|ref|YP_007108414.1| histone deacetylase [Geitlerinema sp. PCC 7407]
gi|427984218|gb|AFY65362.1| Histone deacetylase [Geitlerinema sp. PCC 7407]
Length = 305
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y PDY I + H F +K+ + + L +G + +P + E L
Sbjct: 1 MDLPLVYHPDYVIP---LPAGHRFPMAKFRLLYESLIQDGVAHASQFHQPEYPTPEILAH 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ I +P + + LV+R VGGT+L A++A E
Sbjct: 58 VHGPDYIQAYCEGTLDAKAQRRIGLP----WSSALVRRTC-----TAVGGTLLTARMALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH + G GFC + D+++ + + +V+I+DLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPNHGSGFCIFNDLAIAARVLQAEGVVQKVLIVDLDVHQGDGTALI 168
Query: 210 FSSDSRVYILDM 221
F D V+ M
Sbjct: 169 FQDDPSVFTFSM 180
>gi|17230842|ref|NP_487390.1| histone deacetylase/AcuC/AphA family protein [Nostoc sp. PCC 7120]
gi|17132445|dbj|BAB75049.1| histone deacetylase/AcuC/AphA family protein [Nostoc sp. PCC 7120]
Length = 305
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY PDY + + H F +K+ ++ + L S+ P E + +
Sbjct: 1 MELPIIYHPDY---VAPLPEGHRFPMAKFKKLYELLLSDDVAQTEQFYTPTLPPLELIEL 57
Query: 93 VHSESYLKS-----LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++S L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHTPDYVRSYCEGTLDTKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + D+++ Q + +++I+DLD HQG+G
Sbjct: 107 LSQGLACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLQQQQIVQKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDM 221
F D V+ M
Sbjct: 167 FIFQDDDSVFTFSM 180
>gi|429748657|ref|ZP_19281828.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429170214|gb|EKY11918.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 296
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK---SLQSSPNVSI 110
H F K+ + Q L EG P +AS + L +VH Y+ LQ +
Sbjct: 17 HRFPMLKYALLPQQLLHEGIAQPTDFHTPQKASPQSLCLVHHPDYVHRFIHLQLTHK--- 73
Query: 111 IIEVPPVALFPN-CLVQRKVLYPFRKQVGGTILAAKLA-KERGWAINVGGGFHHCSADEG 168
E P+ N LV+R++ V GTI A A + R A N+ GG HH +D G
Sbjct: 74 --EALPIGFVQNEQLVERELTL-----VQGTIDGALWALQHRQVAFNIAGGTHHAFSDRG 126
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y + R++IIDLD HQGNG + F++D RV+ M YP
Sbjct: 127 EGFCMLNDQAVAAGYLLAHTAVQRILIIDLDVHQGNGTAQIFANDPRVFTFSMHAQHNYP 186
Query: 229 RDYE 232
E
Sbjct: 187 FQKE 190
>gi|408674651|ref|YP_006874399.1| histone deacetylase superfamily [Emticicia oligotrophica DSM 17448]
gi|387856275|gb|AFK04372.1| histone deacetylase superfamily [Emticicia oligotrophica DSM 17448]
Length = 300
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + P K +L VH+E Y L N+SI +
Sbjct: 18 HRFPMMKYELIPEQLLYEGTCTEENFFSPTVVDKRWVLGVHNEQYFNDLL---NLSIDPK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+ FP LV+R+++ GTI A + G ++N+ GG HH +D+G GF
Sbjct: 75 MERRIGFPISEMLVKRELII-----TQGTIDCCHYALQYGISMNIAGGTHHAYSDKGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C D+++ +Y + +V++IDLD HQGNG + F + RV+ M YP
Sbjct: 130 CLLNDVAVAANYLLENQIVKKVLVIDLDVHQGNGTAEIFQQEPRVFTFSMHGKENYP 186
>gi|410614773|ref|ZP_11325811.1| histone deacetylase family protein [Glaciecola psychrophila 170]
gi|410165622|dbj|GAC39700.1| histone deacetylase family protein [Glaciecola psychrophila 170]
Length = 298
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L++ G + N + P S +DL V
Sbjct: 2 IPLVFHPIY--SQLDLPVRHRFPVEKYQGIRDGLAAMGVANDNFHI-PTPISPKDLRQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L + R++ +P+ Q VGGT+L A+L
Sbjct: 59 NPQYVQQLVDGT--------------LDGKAMRRIGFPWSAQLIQRTLTAVGGTVLTARL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH A+ G GFC + D+ L NI +V+I D D HQG+G
Sbjct: 105 ALEHGKALNLTGGYHHAFANYGSGFCLFNDLYLAALSMLKSPNIDKVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
K +++++Y + + +P
Sbjct: 165 AKLAENNTQIYTVSLHAEKNFP 186
>gi|343086372|ref|YP_004775667.1| histone deacetylase superfamily protein [Cyclobacterium marinum DSM
745]
gi|342354906|gb|AEL27436.1| histone deacetylase superfamily [Cyclobacterium marinum DSM 745]
Length = 300
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG L ++ EP +E + +H YL+ L+ +S+
Sbjct: 18 HRFPMEKYDLLPEQLLYEGTLYEDNFFEPEPCQEEVITAIHESLYLEKLKG---LSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + + G+++A+ A + G +N+ GG HH D G GF
Sbjct: 75 EIRRTGFPLSKELVEREI-----QIMNGSVMASLFALKDGIGMNIAGGTHHAFKDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ + + I +V+++DLD HQGNG F +D V+ M YP
Sbjct: 130 CLLNDIAIAAKFLLTKNEIDKVLVVDLDVHQGNGTASIFENDPEVFTFSMHGKHNYPMHK 189
Query: 232 E 232
E
Sbjct: 190 E 190
>gi|116072402|ref|ZP_01469669.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. BL107]
gi|116064924|gb|EAU70683.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. BL107]
Length = 283
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSIIIEVP 115
+K+ + Q L +G +++ I PL S+ DL +H Y ++ Q + I +P
Sbjct: 2 AKFKLLHQLLLDQGLIERKQIYVPLSISRRDLEEIHPRRYHETFSRDQLTRPEQRRIGLP 61
Query: 116 PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYA 175
+ LVQR L VGGT+L A+LA G A ++ GG HH + G GFC +
Sbjct: 62 ATS----ALVQRTWL-----AVGGTLLTARLALRYGLANHLAGGTHHAHPEFGSGFCIFN 112
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
D ++ + + +++I+DLD HQG+G F +D RV + +P
Sbjct: 113 DCAVAARVLLQRHEVEKILIVDLDVHQGDGSAACFQADERVTTFSVHAASNFP 165
>gi|427420410|ref|ZP_18910593.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
gi|425763123|gb|EKV03976.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
Length = 305
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F K+ + L +G + + I +P ++ L +VH
Sbjct: 4 LPVIYHPDY---VTPLPAGHRFPMPKFQLLRDLLVRDGVISEEQIYQPGRPPRDWLELVH 60
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
Y+++ + QR++ P+ + VGGTIL AKL
Sbjct: 61 DSPYVQAYCDGGL--------------DAKAQRRIGLPWSAELVRRTCTAVGGTILTAKL 106
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +G A N GG HH G GFC + DI++ Q + V+++DLD HQG+G
Sbjct: 107 ALNQGLACNTAGGTHHAFPGYGAGFCIFNDIAIATRLLKAQNLLQTVLVVDLDVHQGDGT 166
Query: 207 EKDFSSDSRVYILDM 221
F D V+ M
Sbjct: 167 AWIFRDDPSVFTFSM 181
>gi|337270974|ref|YP_004615029.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
gi|336031284|gb|AEH90935.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
Length = 298
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 27/202 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ PDYD F H F SK+ + + L + G EP AS L + H
Sbjct: 3 LQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALRARGLAGALNTAEPASASW--LKLAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y+ + + F ++R++ +P +V GGTILAA+L
Sbjct: 58 AADYVDQV--------------IGCFVPEKIEREIGFPIGPRVSRRAQLATGGTILAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A N GG HH +G GFC + D+++ + +++IDLD HQG+G
Sbjct: 104 ALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVAALMLLAEGAAHNILVIDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
+ R + M YP
Sbjct: 164 ADILGDEPRAFTFSMHGDRNYP 185
>gi|224825370|ref|ZP_03698475.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
gi|224602291|gb|EEG08469.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
Length = 312
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK-EDLLVVHSESYLKSLQSSPNVSIII 112
H F + K+ + + S GF ++EP A+ +L VH +Y+ +L
Sbjct: 17 HRFPAEKYRLLAE--SVAGFAPH--LLEPASAATPAELCRVHDAAYVHALLEG------- 65
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCS 164
+P A QR++ P+ Q VG TI AA++A +G +N+ GG HH
Sbjct: 66 SLPERA-------QREIGLPWSPQLVARACHSVGATIAAARVALLQGCGVNLAGGTHHAQ 118
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
AD+G GFC + D+++ + +I R ++IDLD HQGNG F ++RV+ M
Sbjct: 119 ADKGSGFCVFNDVAVAARLLLDEGHIRRALVIDLDVHQGNGTAALFRDEARVFTFSMHGQ 178
Query: 225 GIYP 228
+P
Sbjct: 179 NNFP 182
>gi|167648847|ref|YP_001686510.1| histone deacetylase superfamily protein [Caulobacter sp. K31]
gi|167351277|gb|ABZ74012.1| histone deacetylase superfamily [Caulobacter sp. K31]
Length = 305
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +EG V P ++ L +VH
Sbjct: 7 PIVHHPAFRAE---MPVGHRFPMDKFSRLAAVLEAEGVAGPAGFVRPEPIDEDSLRLVHD 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E+Y++ + I + +PP + PN V R GGT+ AA+LA E G
Sbjct: 64 EAYVRGV-------IDLTLPPEFVRRIGMPNT---DSVAARARAATGGTLAAARLALEHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH AD G GFC + D+++ + + +V+++DLD HQG+G + F
Sbjct: 114 VACNTAGGSHHAQADTGAGFCVFNDVAVAARRLLAEGKVGQVLVVDLDVHQGDGTARIFE 173
Query: 212 SDSRVYILDMFNPGIYP 228
D+ V+ M +P
Sbjct: 174 GDASVFTFSMHAEKNFP 190
>gi|119510696|ref|ZP_01629824.1| histone deacetylase/AcuC/AphA family protein [Nodularia spumigena
CCY9414]
gi|119464650|gb|EAW45559.1| histone deacetylase/AcuC/AphA family protein [Nodularia spumigena
CCY9414]
Length = 305
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY PDY + H F SK+ ++ + L +EG P E + +
Sbjct: 1 MELPIIYHPDY---IAPLPPGHRFPMSKFEKLYELLLAEGVAQTAQFHTPKRPPPELIEL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
VH+ Y+K+ L P QR++ P+ + VGGTIL A
Sbjct: 58 VHTSEYVKAYCEG------------TLEPK--AQRRIGLPWSPELVNRTCVAVGGTILTA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
++A +G A N GG HH G GFC + D+++ + ++I+DLD HQG+
Sbjct: 104 QMALSQGLACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKLGLVQNILIVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDM 221
G F D V+ M
Sbjct: 164 GTAVIFQGDDSVFTFSM 180
>gi|75909399|ref|YP_323695.1| histone deacetylase superfamily protein [Anabaena variabilis ATCC
29413]
gi|75703124|gb|ABA22800.1| Histone deacetylase superfamily [Anabaena variabilis ATCC 29413]
Length = 305
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY P Y + + H F +K+ ++ + L S+ P+ E + +
Sbjct: 1 MELPIIYHPHY---VAPLPEGHRFPMAKFKKLYELLLSDDVAQTEQFYTPILPHPELIEL 57
Query: 93 VHSESYLKS-----LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++S L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHTPDYVRSYCEGTLDTKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + DI++ Q + +++I+DLD HQG+G
Sbjct: 107 LNQGLACNTAGGTHHAFPSYGSGFCIFNDIAIASRVLQQQQLVKKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDM 221
F D V+ M
Sbjct: 167 FIFQDDDSVFTFSM 180
>gi|170728227|ref|YP_001762253.1| histone deacetylase superfamily protein [Shewanella woodyi ATCC
51908]
gi|169813574|gb|ACA88158.1| histone deacetylase superfamily [Shewanella woodyi ATCC 51908]
Length = 305
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN-----CIVEPLEASKED 89
LPLIY P Y S L + + H + K+ + F+ + D N P + ++
Sbjct: 2 LPLIYHPMY--SHLSLPEGHRYPIMKYQYLYDFIIKKSETDSNWQQRLAFFSPKALTADE 59
Query: 90 LLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+ VH + Y++ L + + N I P + L+QR + GT+LAA
Sbjct: 60 VKQVHGDEYVEQLMTGTLAANKMRRIGFP----WSEELMQRTL-----TSAAGTVLAAIK 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E G AI++ GG+HH D G GFC D+ L H+ + NI +V+IID D HQG+G
Sbjct: 111 AIEHGVAIHLSGGYHHAHKDFGSGFCLLNDLVLAAHFGLQRENIDKVLIIDSDVHQGDG 169
>gi|410910398|ref|XP_003968677.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like [Takifugu
rubripes]
Length = 333
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y + H F K+ R+ FL + + +N + P AS + L VH
Sbjct: 32 LPIIHHSKY---VCDLPTNHRFPMGKFPRVLHFLFKDQVITENQVWVPEIASSDLLSCVH 88
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
+E YL + N I N QR+ +P+ R + GGT+LAA+L
Sbjct: 89 TEEYLNNFM---NGRI-----------NEQEQRRTGFPWSEGIVTRCRYETGGTLLAAEL 134
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +RG A + GG HH G GFC D+++ Y L +V+I+DLD HQG+G
Sbjct: 135 ALQRGLACSTAGGTHHAFPGFGSGFCLLNDLAVAAKYVSASLK-RKVLIVDLDVHQGDGT 193
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
F + RV+ + +P
Sbjct: 194 AFIFKEEPRVFTFSVHCGKNFP 215
>gi|374330069|ref|YP_005080253.1| histone deacetylase superfamily protein [Pseudovibrio sp. FO-BEG1]
gi|359342857|gb|AEV36231.1| histone deacetylase superfamily [Pseudovibrio sp. FO-BEG1]
Length = 279
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FR 134
EP S++DLL VH+ Y+ + S P+ +V R++ +P FR
Sbjct: 25 EPAPISRDDLLRVHAREYVDQVLSCT-------------VPHAIV-REIGFPMTESVSFR 70
Query: 135 KQ--VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
Q GG++L A LA E G A N GG HH +G GFC + D+++ + + R
Sbjct: 71 AQCATGGSLLTAMLALEHGVACNTAGGSHHARIAQGAGFCVFNDVAVAVRAVQAMRMVRR 130
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
V+IIDLD HQG+G F+ D+ V+ L + + YP
Sbjct: 131 VLIIDLDVHQGDGTADIFAHDTSVFTLSLHSEKNYP 166
>gi|149276367|ref|ZP_01882511.1| deacetylase [Pedobacter sp. BAL39]
gi|149232887|gb|EDM38262.1| deacetylase [Pedobacter sp. BAL39]
Length = 299
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I Q L +G++ + P ++E +L H Y + L+ ++
Sbjct: 18 HRFPMLKYELIPQQLLHQGWISSEQLFAPDLLNEELVLRSHDPKYWEHLK-------MLS 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP QR++ P +Q+ GT+ A A E G A NV GG HH +
Sbjct: 71 LPPKD-------QRRIGLPLSRQLVERELRIAQGTVEGALHALEDGIAFNVAGGTHHAGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC D ++ +Y + + RV+IIDLD HQGNG + F+ D RV+ M
Sbjct: 124 DWGEGFCLLNDQAIAANYLLDKGLVGRVLIIDLDVHQGNGTAEIFADDRRVFTFSMHGDK 183
Query: 226 IYP 228
+P
Sbjct: 184 NFP 186
>gi|220908103|ref|YP_002483414.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7425]
gi|219864714|gb|ACL45053.1| histone deacetylase superfamily [Cyanothece sp. PCC 7425]
Length = 305
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y P+Y + + H F K+ R+ L +EG P ++ L
Sbjct: 1 MALPLVYHPNYGVP---LPPGHRFPMLKFCRLYDLLLAEGIASPAQFHLPALPAQNWLEQ 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y++S S V I +P + LV R VGGTIL A+LA
Sbjct: 58 VHEPTYIQSYSDGTLSEKVLRRIGLP----WSEALVHRT-----WTAVGGTILTAQLAFS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEK 208
G A N GG HH D G GFC + D+++ L ++ +++IIDLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPDYGSGFCIFNDLAIAAR-TVQHLGLAHKILIIDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F DS V+ M +P
Sbjct: 168 IFRHDSSVFTFSMHCQANFP 187
>gi|408373839|ref|ZP_11171532.1| deacetylase [Alcanivorax hongdengensis A-11-3]
gi|407766333|gb|EKF74777.1| deacetylase [Alcanivorax hongdengensis A-11-3]
Length = 313
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F G H F K+GR+ +L +G + P A L VH
Sbjct: 2 LPLVYHPEYSFPFPGA---HRFPMEKFGRLHGYLRGQGIATADNTFRPGRARPALLGRVH 58
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ ++ + + +P + LV+R + P GT+L A+LA ++G
Sbjct: 59 CPDYVSAVLENRLDDRARRRMGLP----WSEALVKRTCIAPM-----GTLLTAQLALKQG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D G GFC + D++ + R++I D D HQG+G +
Sbjct: 110 LACHLAGGTHHAYRDFGSGFCLFNDLAFAARLLLDSAAVDRLLIFDCDVHQGDGTAAMLA 169
Query: 212 SDSRVY 217
+ R +
Sbjct: 170 DEPRAF 175
>gi|209523626|ref|ZP_03272180.1| histone deacetylase superfamily [Arthrospira maxima CS-328]
gi|423065918|ref|ZP_17054708.1| histone deacetylase superfamily [Arthrospira platensis C1]
gi|209496031|gb|EDZ96332.1| histone deacetylase superfamily [Arthrospira maxima CS-328]
gi|406712676|gb|EKD07860.1| histone deacetylase superfamily [Arthrospira platensis C1]
Length = 305
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLQEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ + P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVEAYCQGKLDPKAQRRIGLP----WSQALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + DI++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDIAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
F + V+ M +P
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP 187
>gi|428304940|ref|YP_007141765.1| histone deacetylase [Crinalium epipsammum PCC 9333]
gi|428246475|gb|AFZ12255.1| Histone deacetylase [Crinalium epipsammum PCC 9333]
Length = 305
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y P+Y + + + H F K+ ++ + L +G +K P+ ++ + +VH
Sbjct: 3 LPIVYHPNYVVP---LPEGHRFPMPKFKKLYELLIKDGVAEKTQFYSPVRPPEDWIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ +L + I + P C+ VGGTIL A+LA
Sbjct: 60 TPEYVQAYCQGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTILTARLALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEK 208
G A N GG HH + G GFC + D+++ QL + +++I+DLD HQG+G
Sbjct: 109 YGLACNTAGGTHHAFPNYGSGFCIFNDLAVTAR-VLQQLGLVKKILIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDM 221
F D V+ M
Sbjct: 168 IFQDDKSVFTFSM 180
>gi|254502902|ref|ZP_05115053.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
gi|222438973|gb|EEE45652.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
Length = 313
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ P Y + H F K+ + + +EG L P A E + +
Sbjct: 1 MTLPIVHHPAY---CADLPANHRFPMDKFRAVADLIRAEGLLGSGDFYRPRPAPFEWVAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAA 144
H Y+ + ++ EVP + R++ +P R + GG++L
Sbjct: 58 AHDPVYVDQVFNA-------EVPQK-------IAREIGFPMRADIALRARCATGGSVLTG 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A N GG HH G GFC + D+++ + I + ++IDLD HQG+
Sbjct: 104 YLALEHGLACNTAGGSHHARRAHGAGFCVFNDVAVALKVLQADGAIRKALVIDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G FS D ++ M + YP
Sbjct: 164 GTADIFSGDPDIFTFSMHSAKNYP 187
>gi|410030521|ref|ZP_11280351.1| deacetylase [Marinilabilia sp. AK2]
Length = 300
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
K H F K+ + + L EG ++ EP S+E ++ H +Y + L+S +S+
Sbjct: 16 KGHRFPMEKYNLLPEQLLYEGTVNSCNFFEPEALSREWIVNTHKSAYFEKLES---LSLS 72
Query: 112 IEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
FP LV+R++ + G++ AA A E G A+N+ GG HH D G
Sbjct: 73 KSEIRKTGFPLSKALVEREI-----HIMHGSVQAALFALEYGVAMNIAGGTHHAFTDRGE 127
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC DI++ +Y +++++DLD HQGNG + F + +V+ M YP
Sbjct: 128 GFCLLNDIAITANYLLENNLAKQILVVDLDVHQGNGTAEIFRKEPKVFTFSMHGASNYPM 187
Query: 230 DYE 232
E
Sbjct: 188 HKE 190
>gi|393770657|ref|ZP_10359135.1| histone deacetylase [Novosphingobium sp. Rr 2-17]
gi|392723764|gb|EIZ81151.1| histone deacetylase [Novosphingobium sp. Rr 2-17]
Length = 303
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 28/212 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + +++ F K+ + + L G K + P +E L VH
Sbjct: 2 LHVVHHPGYVVE---TDRMGTFPHDKYALVMRVLGGSGETMK--VHAPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ + I VP QR++ + +++ GGT LAAKL
Sbjct: 57 EPAYVDEV-------INCSVPAAK-------QRRIGFAIDERISRRSQLSPGGTWLAAKL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G+A N GG HH AD G G+C + D++L + + N+SR++I+DLD HQG+G
Sbjct: 103 ALQHGYAANSAGGSHHALADSGAGYCVFNDLALTANRLIAERNVSRILILDLDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
+ S ++ L + +P +AR +D
Sbjct: 163 AALTAGRSDIFTLSIHAEKNFP-TRKARSSLD 193
>gi|145354637|ref|XP_001421586.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581824|gb|ABO99879.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 323
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK---NCIVEPLEASKEDLL 91
+P+++ Y + + H F + + R+ L EG + + NC V S ++L
Sbjct: 17 VPVVHHASYSKPVM--PRGHRFPMTVFQRVHDILREEGVIARGQTNCFVPGRAPSVDELC 74
Query: 92 VVHSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
H E Y++ +++S I +P + + LV+R ++ +V GT+L LA
Sbjct: 75 RAHDEDYVRDVRASALDAKREREIGLP----WSDALVERTLM-----EVSGTMLTVDLAM 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ G +N GG HH D G GFC D+++ A +SRVMIIDLD HQG+G
Sbjct: 126 KVGLCVNTAGGTHHAHRDRGSGFCIVNDLAVSALRAIDSGAVSRVMIIDLDVHQGDGTAA 185
Query: 209 DFSSDSRVYILDMFNPGIYP 228
+++ V+ +P
Sbjct: 186 ILANEPGVFTFSAHAKSNFP 205
>gi|418668158|ref|ZP_13229562.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756191|gb|EKR17817.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 271
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +LA++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELAQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F +D V+ M +YP+
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPK 160
>gi|77361149|ref|YP_340724.1| histone deacetylase [Pseudoalteromonas haloplanktis TAC125]
gi|76876060|emb|CAI87282.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 302
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +V+PL + E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFVMSKFAHLYQHVKQLGLVGDN-LVQPLLGTPEALELVH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E+Y+ L Q I +P + L+ R P GT+ A+LA + G
Sbjct: 63 CENYIHDLYHNQLDEKAMRRIGLP----WSKELMARTFTAP-----QGTLQTARLALKHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 114 MACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|108803993|ref|YP_643930.1| histone deacetylase superfamily protein [Rubrobacter xylanophilus
DSM 9941]
gi|108765236|gb|ABG04118.1| histone deacetylase superfamily [Rubrobacter xylanophilus DSM 9941]
Length = 301
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVG 138
EP A EDLL HS SYL+ + S S+ + FP LV+R R+ G
Sbjct: 42 EPRRAKDEDLLRAHSPSYLRRVVSG---SLGKQELRRLGFPWSERLVERS-----RRAAG 93
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTI A A E G A N+ GG HH AD G GFC + D ++ I + R +ID
Sbjct: 94 GTIDACLAALEEGIAANLAGGTHHAFADRGEGFCVFNDAAVAIRAVQAAGLVERAAVIDT 153
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
D HQG+G F++D V+ + YP
Sbjct: 154 DVHQGDGTAAIFAADGSVFTFSVHGEKNYP 183
>gi|383453278|ref|YP_005367267.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380727969|gb|AFE03971.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 299
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L G L E A + +L VH+ YL + E
Sbjct: 17 HRFPMEKYRLLREILLERGILPLAVFHEAPRAERGELEHVHTPRYLDAFFGGKLTDA--E 74
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ + FP L +++ R VGGT+ AA+ A E G+ N+ GG HH D G GFC
Sbjct: 75 LRRLG-FPWSL---RLVDNARASVGGTLAAARAALEDGFGANLAGGTHHAFPDHGEGFCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ DI++ I + I R +++DLD HQGNG F+ D V+ M +P
Sbjct: 131 FNDIAVAIRVLQAEGAIRRAVVVDLDVHQGNGTAAVFAGDPSVFTFSMHGEHNFP 185
>gi|254471722|ref|ZP_05085123.1| histone deacetylase family protein [Pseudovibrio sp. JE062]
gi|211958924|gb|EEA94123.1| histone deacetylase family protein [Pseudovibrio sp. JE062]
Length = 279
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FR 134
EP S++DLL VH+ Y+ + S VP + R++ +P FR
Sbjct: 25 EPAPISRDDLLRVHAREYVDQVLSC-------SVPHA-------IAREIGFPMTESVSFR 70
Query: 135 KQ--VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
Q GG++L A LA E G A N GG HH +G GFC + D+++ + + R
Sbjct: 71 AQCATGGSLLTAMLALEHGVACNTAGGSHHARIAQGAGFCVFNDVAVAVRAVQAMRMVRR 130
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
V+IIDLD HQG+G F+ D+ V+ L + + YP
Sbjct: 131 VLIIDLDVHQGDGTADIFAHDTSVFTLSLHSEKNYP 166
>gi|330507276|ref|YP_004383704.1| histone deacetylase family protein [Methanosaeta concilii GP6]
gi|328928084|gb|AEB67886.1| histone deacetylase family protein [Methanosaeta concilii GP6]
Length = 373
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLD-KNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSII 111
HPF+ ++ + G +D K C +EP AS+ED+L VH+ YL +++ P+++
Sbjct: 19 HPFNPARLMLTFSLMEESGLIDEKVCRLEPRPASEEDILRVHTPEYLAAVKLEEPDLAFG 78
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWAINVGGGFHHCSADEGGG 170
+ +F ++L G +I AA+ + E A N+GGG HH G
Sbjct: 79 LGSDDTPVFAGICESSRML------AGASIDAARRIIAEDCSAFNIGGGLHHALPTVASG 132
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
FC + D +L I ++ RV+ ID+D H G+G ++ F +D V + M G+Y
Sbjct: 133 FCVFDDPALAIR--VLRDGFDRVLYIDIDGHHGDGVQQIFYTDPTVLTISMHESGLY 187
>gi|254421490|ref|ZP_05035208.1| Histone deacetylase family, putative [Synechococcus sp. PCC 7335]
gi|196188979|gb|EDX83943.1| Histone deacetylase family, putative [Synechococcus sp. PCC 7335]
Length = 304
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y P Y + H F K+ + L + + + I +P + L +VH
Sbjct: 4 FPVVYHPAY---VTPLPDGHRFPMPKFRLLRDLLVRDRIITEAQIFQPGAPPVDWLELVH 60
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ S+++ I + P LVQR VGGTIL AKLA +
Sbjct: 61 TADYVQAYCSGSIETKAQRRIGLPWSP------GLVQRTC-----TAVGGTILTAKLALK 109
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH D G GFC + D+++ I Q I R +IIDLD HQG+G
Sbjct: 110 HGIACNTAGGTHHAFPDYGSGFCIFNDLAIAIKVLQSQNLIHRALIIDLDVHQGDGSAFI 169
Query: 210 FSSDSRVYILDMFNPGIYP 228
F D V+ M +P
Sbjct: 170 FKDDPSVFTFSMHCKANFP 188
>gi|88859197|ref|ZP_01133837.1| putative histone deacetylase family protein [Pseudoalteromonas
tunicata D2]
gi|88818214|gb|EAR28029.1| putative histone deacetylase family protein [Pseudoalteromonas
tunicata D2]
Length = 302
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F + H F SK+ + Q L G+++ N I +PL AS +L VH
Sbjct: 7 LPLVYHPNYSFEF---DPNHRFVMSKFADLYQHLVQTGYVNHN-IFKPLRASISELEKVH 62
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
YL L + S I +P + L+ R + + GT+L A+LA + G
Sbjct: 63 CSRYLHQLNQNTLDQKASRRIGLP----WSEQLMARTFI-----EAQGTLLTAQLALKNG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D G GFC D++ +++ V+I DLD HQG+G
Sbjct: 114 IACHLAGGTHHAHYDFGSGFCMVNDLAYTAASLIDSGDVTNVLIFDLDVHQGDG 167
>gi|389695472|ref|ZP_10183114.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
gi|388584278|gb|EIM24573.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
Length = 303
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++ P Y + H F K+GR+ + ++ +G L +P EAS E + +
Sbjct: 3 QVPIVSHPAYQAV---MPDGHRFPMRKYGRLAEIIAEKG-LAPGGFAKPEEASAELIALA 58
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H +Y+ + + S+ E+ P + V+ R GGT+LAA+LA + G +
Sbjct: 59 HDRAYVDQVFAG---SVPHEIERRIGLP---MSESVVRRARASAGGTLLAARLALQHGLS 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+ GG HH + G GFC + D+++ + I +I+DLD HQG+G +
Sbjct: 113 GSTAGGSHHGQRETGAGFCVFNDVAIAAKALHAEGAIRHALIVDLDVHQGDGTADCLRDE 172
Query: 214 SRVYILDMFNPGIYP 228
++ M YP
Sbjct: 173 PDLFTFSMHAEKNYP 187
>gi|268315689|ref|YP_003289408.1| histone deacetylase superfamily protein [Rhodothermus marinus DSM
4252]
gi|262333223|gb|ACY47020.1| histone deacetylase superfamily [Rhodothermus marinus DSM 4252]
Length = 378
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y PDY G E HPF + + L + G + P EA++ D+L VH
Sbjct: 2 VPVVYHPDYLTYCFGPE--HPFSPVRLEMLWTLLEALGC--APTPIRPPEATRADVLRVH 57
Query: 95 SESYLKSLQSSPNVSII-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL- 146
+E Y+ ++++ + ++ P V +FP+ ++L VGGT+ A+L
Sbjct: 58 AEDYVARVEAASRGEYVPDAEAFGLDTPDVPVFPDMDRAARIL------VGGTLHGARLI 111
Query: 147 AKERGWAI-NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A R + +GGGFHH GFC Y D+S+ I A + RV ID+D H G+G
Sbjct: 112 ADGRATTVLQLGGGFHHAHPARASGFCVYNDLSIAIR-ALTDAGL-RVAYIDIDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ + V + + G Y
Sbjct: 170 VQAIHYREDTVLTISLHETGQY 191
>gi|392967178|ref|ZP_10332596.1| Histone deacetylase [Fibrisoma limi BUZ 3]
gi|387843975|emb|CCH54644.1| Histone deacetylase [Fibrisoma limi BUZ 3]
Length = 300
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F K+ I + L EG P +L VH+ +Y++ LQ+ P +
Sbjct: 18 HRFPMVKYELIHEQLLYEGTCTDANFFHPQPVDDRWVLGVHTATYVQQLQTLTVDPKMVR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P A L++R+ + GTI A+ G A+NV GG HH D+G G
Sbjct: 78 RIGFPLSA----GLIEREWVI-----TQGTIDCTHKARRDGVAMNVAGGTHHAFPDKGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D+ + HY + +++IIDLD HQGNG F + RV+ M YP
Sbjct: 129 FCLLNDVGVAAHYLLETQQVRQILIIDLDVHQGNGTAVMFQHEPRVFTFSMHGKDNYP 186
>gi|298207409|ref|YP_003715588.1| Histone deacetylase superfamily protein [Croceibacter atlanticus
HTCC2559]
gi|83850045|gb|EAP87913.1| Histone deacetylase superfamily protein [Croceibacter atlanticus
HTCC2559]
Length = 299
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y + + + H F K+ + + L EG D + EP+ S+ + +VH
Sbjct: 2 LKIAYHPIYKVP---LPEGHRFPMEKYELLPKQLIYEGTCDPDNFFEPV-YSETFVDLVH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+ +Y+ L+ N+++ FP + LV+R+ + GTI A A E G
Sbjct: 58 TTNYISDLK---NLTLDARAARKIGFPLNSALVEREFII-----ADGTIKACDFALEYGI 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH + G GFC + D ++ Y +V+IIDLD HQGNG + F
Sbjct: 110 AMNIAGGTHHAYTNRGEGFCMFNDQAIGARYLQHTNKAKQVLIIDLDVHQGNGTAEIFKD 169
Query: 213 DSRVYILDMFNPGIYPRDYEA 233
D+ V+ M YP E+
Sbjct: 170 DTSVFTFSMHGEKNYPFKKES 190
>gi|358444918|ref|ZP_09155534.1| putative acetoin utilization protein AcuC [Corynebacterium casei
UCMA 3821]
gi|356609149|emb|CCE53754.1| putative acetoin utilization protein AcuC [Corynebacterium casei
UCMA 3821]
Length = 372
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KL LI + + LG E HP + G LD I +P A+ E L +
Sbjct: 1 MKLALIDTDEIHNYSLGTE--HPMGPDRVDAALALSQQLGILDAFQISQPNVATDEILEL 58
Query: 93 VHSESYLKSLQSS-PNVSIIIEVPPVALFPNC-----LVQRKVLYPFRKQVGGTILAAKL 146
VHS++Y+++ +++ PN I + P + R L R GT
Sbjct: 59 VHSKAYIQATRTNHPNPKFGIGTTDNPVVPGLSDVAGRISRGTLDATRAVWEGT------ 112
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+R A+N+ GG HH D GFC Y D ++ I + NI RV ID DAH G+G
Sbjct: 113 -ADR--AVNLAGGLHHAFPDSMSGFCMYNDAAIAITWLLENTNIERVAYIDFDAHHGDGV 169
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
EK F D RV + + G+Y
Sbjct: 170 EKFFWDDPRVLTISVHESGLY 190
>gi|297623371|ref|YP_003704805.1| histone deacetylase [Truepera radiovictrix DSM 17093]
gi|297164551|gb|ADI14262.1| Histone deacetylase [Truepera radiovictrix DSM 17093]
Length = 309
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F + K+ ++ L G+ + E A +EDL VH+ +YL +L++
Sbjct: 27 HRFPAQKYAQLAARLRELGWQ----VDEAPAAPREDLARVHTAAYLAALEAL-------A 75
Query: 114 VPPVALFPNCLVQ-RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+PP A L Q R +L R VGGT+ A A+ RG+ +N+GGG HH AD G GFC
Sbjct: 76 LPPKAERRLGLPQSRALLTRERHTVGGTLAALYDARTRGYGVNLGGGTHHAFADRGEGFC 135
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+++ ++A + +RVMIIDLD HQG+ + D V+ + YP
Sbjct: 136 VFNDLAVAAYHALERGLAARVMIIDLDVHQGDDTAHLCAFDPHVFTYSVHGAHNYP 191
>gi|409099281|ref|ZP_11219305.1| histone deacetylase [Pedobacter agri PB92]
Length = 300
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I L EG +D+N + P ++ +L+ H +Y + L+ +
Sbjct: 18 HRFPMLKYELIPGQLLHEGTIDQNNLFSPNLVDEDIILLTHDANYWRQLRE-------LT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP QR++ +P Q+ GTI A + G A N GG HH +
Sbjct: 71 LPPKE-------QRRIGFPLNAQLVERELRITQGTIDGTGYAIKNGIAFNAAGGTHHSGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G GFC D ++ +Y + + R++I+DLD HQGNG + F ++ RV+ M
Sbjct: 124 NWGEGFCLLNDQAIAANYLINKNLVDRILIVDLDVHQGNGTAEIFRNEPRVFTFSMHGDK 183
Query: 226 IYP 228
+P
Sbjct: 184 NFP 186
>gi|33865411|ref|NP_896970.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. WH
8102]
gi|33632580|emb|CAE07392.1| Putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 8102]
Length = 323
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSI 110
H F +K+ + + L E L N I PL + DL +H SY ++ Q S +
Sbjct: 37 HRFPMAKFRLLRRLLLDEQVLQANQIRRPLSIPRRDLERIHRRSYHQAFSRDQLSRSEQR 96
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I +P A P LVQR L VGGT+L A+LA + G A ++ GG HH G G
Sbjct: 97 RIGLP--ATRP--LVQRTWL-----SVGGTLLTARLALQHGIACHLAGGTHHAHPGFGSG 147
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC + D++ + R++++DLD HQG+G F+ + R+ L + +P
Sbjct: 148 FCIFNDVATTARVLLDNGEVQRLLVVDLDVHQGDGTAACFADEPRITTLSVHAASNFP 205
>gi|427732319|ref|YP_007078556.1| deacetylase [Nostoc sp. PCC 7524]
gi|427368238|gb|AFY50959.1| deacetylase, histone deacetylase/acetoin utilization protein
[Nostoc sp. PCC 7524]
Length = 305
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY PDY + + H F K+ ++ + L +EG P + E + +
Sbjct: 1 MDLPIIYHPDY---VAPLPEGHRFPMPKFQKLYELLLTEGVAHLEQFHTPTRPNSELIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+ Y++ P I +P + L R + VGGTIL A+LA
Sbjct: 58 VHTPDYVQGYCEGTLDPKAQRRIGLP----WSPALANRTCV-----AVGGTILTAQLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ Q + +++I+DLD HQG+G
Sbjct: 109 QGLACNTAGGTHHAFPCYGSGFCIFNDLAIASRVLQKQGLVQKILIVDLDVHQGDGTAFI 168
Query: 210 FSSDSRVYILDM 221
F D V+ M
Sbjct: 169 FQDDDSVFTFSM 180
>gi|300773816|ref|ZP_07083685.1| histone deacetylase [Sphingobacterium spiritivorum ATCC 33861]
gi|300759987|gb|EFK56814.1| histone deacetylase [Sphingobacterium spiritivorum ATCC 33861]
Length = 334
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
H F K+ I L EG + K+ EP S+E + H ESY++ L + + + +I
Sbjct: 51 HRFPMLKYELIPMQLIHEGLVSKDSFFEPELVSEEIACLAHDESYVRDLFELTLDARMIR 110
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP + L++R+ R V GTI A A + G A NV GG HH G G
Sbjct: 111 RIG----FPLTDSLIRRE-----RLIVDGTIRTALFAIQYGIAFNVAGGTHHAGYAYGEG 161
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D ++ Y + +++IIDLD HQGNG F V+ M +P
Sbjct: 162 FCLLNDQAIAAAYLLAEQKAHKILIIDLDVHQGNGTANIFKGSKAVFTFSMHGAKNFP 219
>gi|410450935|ref|ZP_11304962.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|418746281|ref|ZP_13302611.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|418753911|ref|ZP_13310147.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|421110535|ref|ZP_15571030.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|409965752|gb|EKO33613.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|410015247|gb|EKO77352.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|410792828|gb|EKR90753.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|410804131|gb|EKS10254.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|456876398|gb|EMF91500.1| histone deacetylase family protein [Leptospira santarosai str.
ST188]
Length = 270
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH+E +L S I E + P + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTEEFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTEKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F D V+ M +YP+
Sbjct: 130 DLHQGNGNSVVFQEDPDVFTFSMHQENLYPK 160
>gi|86604935|ref|YP_473698.1| histone deacetylase family protein [Synechococcus sp. JA-3-3Ab]
gi|86553477|gb|ABC98435.1| histone deacetylase family protein [Synechococcus sp. JA-3-3Ab]
Length = 305
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F K+ + + L EG + + +P +
Sbjct: 1 MSLPVVYHPDYSAP---LPPGHRFPMPKFRLLHELLLREGVIRPQQVHQPELPPLAWIES 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ SL++ I + P LVQR + VGGT+L A+LA
Sbjct: 58 VHTPEYVRAYCEGSLEAKLQRRIGLPWSPE------LVQRTC-----RAVGGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ Q + +V+I+DLD HQG+G
Sbjct: 107 LRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQKVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEA 233
F S+ RV+ M +P +A
Sbjct: 167 WIFRSEPRVFTFSMHCAANFPATKQA 192
>gi|313680385|ref|YP_004058124.1| histone deacetylase [Oceanithermus profundus DSM 14977]
gi|313153100|gb|ADR36951.1| Histone deacetylase [Oceanithermus profundus DSM 14977]
Length = 378
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVV 93
+P++Y P+Y G + HPF + + + L LD V ++A +ED+L V
Sbjct: 2 VPVVYRPEYLTYDFGPQ--HPFSPQRLAMLVELLEE---LDPAWGPVAAVQARREDVLTV 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAKL 146
H+E +++ ++++ + ++ L FP + L VGGT+ A+L
Sbjct: 57 HAERFVRRVEAASQGAPPDDLDEYGLGTSDTPVFPGMDAAARWL------VGGTLTGARL 110
Query: 147 AKERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
G A + +GGG HH D GFC Y D+++ IH+ F++ + RV+ +D+D H G
Sbjct: 111 VSG-GTARRVLQLGGGLHHAQFDRASGFCVYNDLAVAIHH-FLEAGM-RVLYVDVDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIY 227
+G + F D RV L + G Y
Sbjct: 168 DGVQWIFYKDPRVLTLSLHESGRY 191
>gi|321496307|gb|EAQ39532.2| deacetylase [Dokdonia donghaensis MED134]
Length = 300
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
PI+K PL + H F K+ + + L EG + EP++ + E +
Sbjct: 8 PIYKHPL-------------PEGHRFPMEKYDLLPKQLVYEGTCIADNFFEPVQVAHEHI 54
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
L H+ Y+ +L++ + + P A QRK +P +++ GTI
Sbjct: 55 LRCHTTEYVDNLKA-------LTIDPRA-------QRKTGFPLSQELVDRELIITQGTID 100
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A E G A+N+ GG HH D G FC D ++ Y +++I+DLD HQ
Sbjct: 101 GCHYALENGIAMNIAGGTHHAYTDHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQ 160
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYP 228
GNG + F+ D V+ M YP
Sbjct: 161 GNGTAEIFAGDDSVFTFSMHGKANYP 186
>gi|373957064|ref|ZP_09617024.1| histone deacetylase superfamily [Mucilaginibacter paludis DSM
18603]
gi|373893664|gb|EHQ29561.1| histone deacetylase superfamily [Mucilaginibacter paludis DSM
18603]
Length = 300
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
H F K+ I Q L EG + + + P + +L+ H + Y L+ L S
Sbjct: 18 HRFPMLKYELIPQQLLHEGVITSDNLFSPDAVDEATILLSHQKDYWEQLRDLTLSAKEQR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P A LV+R+V + GTI A E G A NV GG HH ++ G G
Sbjct: 78 RIGFPLSAR----LVEREV-----RIAKGTIDGCYFAFEHGVAFNVAGGTHHAGSNWGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ +Y + + V+I+DLD HQGNG + F ++SRV+ M +P
Sbjct: 129 FCMLNDQAIAANYLLAEKLATSVLIVDLDVHQGNGTAQIFENESRVFTFSMHGANNFPSR 188
Query: 231 YE 232
E
Sbjct: 189 KE 190
>gi|16127878|ref|NP_422442.1| histone deacetylase [Caulobacter crescentus CB15]
gi|221236699|ref|YP_002519136.1| deacetylase [Caulobacter crescentus NA1000]
gi|13425404|gb|AAK25610.1| histone deacetylase family protein [Caulobacter crescentus CB15]
gi|220965872|gb|ACL97228.1| deacetylase [Caulobacter crescentus NA1000]
Length = 304
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +E + P E L + HS
Sbjct: 6 PIVHHPAFRAE---MPAGHRFPMDKFSRLAALLEAERVAGPDGFARPEPVDVETLCLAHS 62
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E Y++ + I + +PP + PN V R GGT+LAA+LA ERG
Sbjct: 63 EDYVRGV-------IELSLPPDIVRRIGMPN---TESVATRARAATGGTLLAARLALERG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH +AD G GFC + D+++ + I + +++DLD HQG+G + F
Sbjct: 113 IACNTAGGSHHAAADAGAGFCVFNDVAVAARRLLAEGAIGKALVVDLDVHQGDGTARIFE 172
Query: 212 SDSRVYILDMFNPGIYP 228
+D V+ M +P
Sbjct: 173 NDPSVFTFSMHAEKNFP 189
>gi|418702252|ref|ZP_13263163.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410758771|gb|EKR24997.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 271
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F +D V+ M +YP+
Sbjct: 130 DLHQGNGNSFIFQNDPNVFTFSMHQENLYPK 160
>gi|427702729|ref|YP_007045951.1| deacetylase [Cyanobium gracile PCC 6307]
gi|427345897|gb|AFY28610.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cyanobium gracile PCC 6307]
Length = 321
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL+Y P Y + + H F K+ + + L I +PL A + L +VH
Sbjct: 4 PLVYHPAYAVP---LPSGHRFPMQKFRLLKERLEQLELARPGQIHQPLPAPRRWLELVHG 60
Query: 96 ESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y ++ +P I +P LV+R L VGGT+L A+LA G
Sbjct: 61 RGYHEAFSRGLLTPQEVRRIGLP----VSEPLVRRSWL-----AVGGTVLTARLALRHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH G GFC + D ++ + + +V+++DLD HQG+G F+
Sbjct: 112 ACHLAGGTHHAFPLHGSGFCIFNDCAVAARVLLAEGLVRQVLVVDLDVHQGDGTAAIFTG 171
Query: 213 DSRVYILDMFNPGIYP 228
D RV+ M +P
Sbjct: 172 DPRVFSFSMHAASNFP 187
>gi|374364611|ref|ZP_09622713.1| histone deacetylase family deacetylase [Cupriavidus basilensis
OR16]
gi|373103908|gb|EHP44927.1| histone deacetylase family deacetylase [Cupriavidus basilensis
OR16]
Length = 322
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRK 135
+VE A + LL+ H+ Y+ S+ P+ I P + + +V+R R+
Sbjct: 40 LVEAPRAGDDALLLAHTPEYVASVSRGELDPSRQREIGFP----WSDAMVERS-----RR 90
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G TI A ++A G ++N+ GG HH AD+GGGFC + D ++ + RV +
Sbjct: 91 SAGATIEACRIALREGISVNLAGGTHHAYADKGGGFCVFNDAAVAARQLRRDGRVERVAV 150
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+DLD HQGNG D V+ L + YP EA
Sbjct: 151 VDLDVHQGNGTASILRDDPFVFTLSLHGEKNYPFRKEA 188
>gi|325672689|ref|ZP_08152385.1| acetoin dehydrogenase AcuC [Rhodococcus equi ATCC 33707]
gi|325556566|gb|EGD26232.1| acetoin dehydrogenase AcuC [Rhodococcus equi ATCC 33707]
Length = 405
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 22/196 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ G +D +V P AS DLL +H+
Sbjct: 1 MVWSPDY-LSYR-WSPQHPMNPTRLDLTMALADGLGLIDAAEVVRPDAASDADLLRIHTP 58
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKV------LYPFRKQV-----GGTILAAK 145
+Y+ + V + + P AL P + + ++P + GG++ AAK
Sbjct: 59 AYIDA------VKLAGDGPDTALPPELETRHGLGTDDNPIFPRMHEASAVLAGGSLAAAK 112
Query: 146 -LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+A R A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G
Sbjct: 113 EIASGRARRAVSIGGGMHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYVDIDAHHG 171
Query: 204 NGHEKDFSSDSRVYIL 219
+G + F D RV +
Sbjct: 172 DGVQHAFLGDPRVMTI 187
>gi|449091626|ref|YP_007424067.1| hypothetical protein HD73_4968 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449025383|gb|AGE80546.1| hypothetical protein HD73_4968 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 388
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAIKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|30022737|ref|NP_834368.1| acetoin utilization protein AcuC [Bacillus cereus ATCC 14579]
gi|423640267|ref|ZP_17615885.1| hypothetical protein IK9_00212 [Bacillus cereus VD166]
gi|29898296|gb|AAP11569.1| Acetoin utilization acuC protein [Bacillus cereus ATCC 14579]
gi|401281183|gb|EJR87096.1| hypothetical protein IK9_00212 [Bacillus cereus VD166]
Length = 397
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
+S + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMSYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|312139422|ref|YP_004006758.1| histone deacetylase [Rhodococcus equi 103S]
gi|311888761|emb|CBH48073.1| putative histone deacetylase [Rhodococcus equi 103S]
Length = 424
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ G +D +V P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSPQHPMNPTRLDLTMALADGLGLIDAAEVVRPDAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKV------LYPFRKQV-----GGTILAAK 145
+Y+++ V + + P AL P + + ++P + GG++ AAK
Sbjct: 78 AYIEA------VKLAGDGPDAALPPELETRHGLGTDDNPIFPRMHEASAVLAGGSLAAAK 131
Query: 146 -LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+A R A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G
Sbjct: 132 EIASGRARRAVSIGGGMHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYVDIDAHHG 190
Query: 204 NGHEKDFSSDSRVYILDM 221
+G + F D RV + +
Sbjct: 191 DGVQHAFLGDPRVMTISI 208
>gi|359432950|ref|ZP_09223299.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
gi|357920408|dbj|GAA59548.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
Length = 302
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y +F + H F SK+ + Q ++ G ++ N +VEP+ + E L ++H
Sbjct: 7 LPLVYHPNYSFNF---DPKHRFAMSKFAHLYQHVAELGLINNN-LVEPILGTPEPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKELMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHNDFGSGYCMVNDLAFTAQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|423426796|ref|ZP_17403827.1| hypothetical protein IE5_04485 [Bacillus cereus BAG3X2-2]
gi|423502653|ref|ZP_17479245.1| hypothetical protein IG1_00219 [Bacillus cereus HD73]
gi|401110362|gb|EJQ18271.1| hypothetical protein IE5_04485 [Bacillus cereus BAG3X2-2]
gi|402459892|gb|EJV91620.1| hypothetical protein IG1_00219 [Bacillus cereus HD73]
Length = 397
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAIKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|332532061|ref|ZP_08407944.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038402|gb|EGI74846.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 302
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q ++ G + N +VEP+ + E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFVMSKFAHLYQHVAELGLIGSN-LVEPILGTPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y++ L + + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CDNYIQDLWHN-------RLDEKAM-------RRIGLPWSKELMARTFTAAQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHNDFGSGFCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|352096237|ref|ZP_08957117.1| Histone deacetylase [Synechococcus sp. WH 8016]
gi|351676931|gb|EHA60082.1| Histone deacetylase [Synechococcus sp. WH 8016]
Length = 282
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-------QSSPNVSII 111
+K+ + L++ G + N I PL + L VH Y ++ Q+ + +
Sbjct: 2 AKFKMLFSALNALGLAESNQIHAPLPIPRRWLETVHQRRYHEAFARGRLDRQAQRRIGLP 61
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
P LVQR L VGGT+L A+LA E G A ++ GG HH +D G GF
Sbjct: 62 ATTP--------LVQRTWL-----AVGGTLLTARLALEHGVACHLAGGTHHAFSDYGSGF 108
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C + DI++ + + R+MI+DLD HQG+ F+ D RV+ +P
Sbjct: 109 CIFNDIAVSARVLLDEGRLERLMIVDLDVHQGDATAVIFADDPRVFTFSAHAASNFP 165
>gi|93006940|ref|YP_581377.1| histone deacetylase superfamily protein [Psychrobacter
cryohalolentis K5]
gi|92394618|gb|ABE75893.1| histone deacetylase superfamily [Psychrobacter cryohalolentis K5]
Length = 305
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YS DI + + H F K+ I + L +E + N P S++++L H
Sbjct: 2 LKIAYS---DIFRYSVPEKHRFPMQKYTMIPERLLAEKTISANNFFAPTRLSEDEILTTH 58
Query: 95 SESYLKSL--QSSPNV---SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y L Q+ P +I E+ P LV+R R T A A++
Sbjct: 59 TADYWYQLKTQTLPRKEARAIGFEMTPE------LVERG-----RYIAHATYECALYAQQ 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A+NV GG HH +D G GFC + D+ + + + +++++DLD HQGNG+
Sbjct: 108 YGVAMNVAGGTHHAFSDHGEGFCVFNDVCIASNLLLNRGQAQKILVVDLDVHQGNGNASI 167
Query: 210 FSSDSRVYILDMFNPGIYP 228
+++ RV+I M YP
Sbjct: 168 MANEPRVFIFSMHGAKNYP 186
>gi|225012063|ref|ZP_03702500.1| histone deacetylase superfamily [Flavobacteria bacterium MS024-2A]
gi|225003618|gb|EEG41591.1| histone deacetylase superfamily [Flavobacteria bacterium MS024-2A]
Length = 305
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+ + P Y L + + H F K+ + Q L EG +P A+ + +L +H
Sbjct: 7 IPIAFDPIYR---LPLPENHRFPMEKYELLPQQLIYEGTCLATDFFKPTPATLKTVLQIH 63
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+K L +S++ FP LV+R+ + GGTI+ + A E G
Sbjct: 64 DANYVKRL---CELSLLKSEIRSIGFPLSQKLVEREFVI-----AGGTIMGCEKAFETGI 115
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH +D G FC D ++ Y +++IIDLD HQGNG F +
Sbjct: 116 AMNIAGGTHHAFSDRGEAFCLLNDQAIAAQYLLDTKKAKKILIIDLDVHQGNGTASIFKT 175
Query: 213 DSRVYILDMFNPGIYP 228
+ V+ L + YP
Sbjct: 176 NPSVFTLSVHGSKNYP 191
>gi|126173859|ref|YP_001050008.1| histone deacetylase superfamily protein [Shewanella baltica OS155]
gi|386340619|ref|YP_006036985.1| histone deacetylase superfamily protein [Shewanella baltica OS117]
gi|125997064|gb|ABN61139.1| histone deacetylase superfamily [Shewanella baltica OS155]
gi|334863020|gb|AEH13491.1| histone deacetylase superfamily [Shewanella baltica OS117]
Length = 302
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYAHLRQYLLENQLATLAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+G +++ GG+HH D G G+C + D+ L A L + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAARNAIASLQVHKVLIFDCDVHQGDG 166
>gi|291570560|dbj|BAI92832.1| histone deacetylase family protein [Arthrospira platensis NIES-39]
Length = 305
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLEEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+K P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVKGYCEGTLDPKAQRRIGLP----WSPALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDMAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
F + V+ M +P
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP 187
>gi|409990645|ref|ZP_11273991.1| histone deacetylase superfamily protein [Arthrospira platensis str.
Paraca]
gi|409938497|gb|EKN79815.1| histone deacetylase superfamily protein [Arthrospira platensis str.
Paraca]
Length = 305
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLEEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+K P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVKGYCEGTLDPKAQRRIGLP----WSPALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDMAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
F + V+ M +P
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP 187
>gi|423634442|ref|ZP_17610095.1| hypothetical protein IK7_00851 [Bacillus cereus VD156]
gi|401280421|gb|EJR86341.1| hypothetical protein IK7_00851 [Bacillus cereus VD156]
Length = 397
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
IYS D FLG HPF+ + L GF+ + I+ P A+ E++ VH
Sbjct: 14 FIYSDD----FLGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVH 69
Query: 95 SESYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--A 144
+E Y+ + L+ S ++ + +FPN +L VGGT+ A A
Sbjct: 70 TEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDA 123
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+
Sbjct: 124 VLSGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGD 182
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F D V + + G Y
Sbjct: 183 GVQWSFYDDPNVCTISLHETGRY 205
>gi|390363404|ref|XP_784008.3| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like
[Strongylocentrotus purpuratus]
Length = 262
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 82 PLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI 141
P+ +K++L+ VH+E Y++ + V + LV R R + GGTI
Sbjct: 4 PVHVTKDELIRVHTEEYIEKFFEGKTSAKEQRVTGFT-WSEGLVSR-----CRYETGGTI 57
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA+LA RG N GGG HH + G GFC D+++ + + RV+IIDLD H
Sbjct: 58 LAAELALGRGLVCNTGGGTHHAFPEHGAGFCLLNDMAVAASLMVHRGKVDRVLIIDLDVH 117
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYP 228
QG+ F D V+ L + YP
Sbjct: 118 QGDATALIFQEDPSVFTLSVHCGKNYP 144
>gi|404448059|ref|ZP_11013053.1| deacetylase [Indibacter alkaliphilus LW1]
gi|403766645|gb|EJZ27517.1| deacetylase [Indibacter alkaliphilus LW1]
Length = 300
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + K H F K+ + + L EG + P + + H
Sbjct: 2 LKIAWSPKY---CHPLPKGHRFPMDKYNLLPEQLLYEGTVKDENFFSPDALEERWITNTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
YL+ L++ I L + LV+R++ + G++ AA A E G A+
Sbjct: 59 QRDYLEKLKNQTLTKSEIRKTGFPL-SDALVEREI-----HIMHGSVKAALYALEYGVAM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC DI++ +Y +++++DLD HQGNG + F +D+
Sbjct: 113 NIAGGTHHAFTDRGEGFCLLNDIAITANYLLENDLSHKILVVDLDVHQGNGTAEIFQNDN 172
Query: 215 RVYILDMFNPGIYPRDYE 232
RV+ M YP E
Sbjct: 173 RVFTFSMHGASNYPMHKE 190
>gi|335040248|ref|ZP_08533380.1| histone deacetylase superfamily [Caldalkalibacillus thermarum
TA2.A1]
gi|334179819|gb|EGL82452.1| histone deacetylase superfamily [Caldalkalibacillus thermarum
TA2.A1]
Length = 397
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 23/190 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS---- 109
HPF+ + Q L GFL + + P A+ E+LL+VH Y+++++ + VS
Sbjct: 25 HPFNQKRIALTKQLLECCGFLTPDQVRAPRLATDEELLLVHDREYIEAVKKASQVSGQSS 84
Query: 110 ----------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-AKERG-WAINVG 157
+ LFP+ + ++ VL VGGT+L A+L A+ R +N+
Sbjct: 85 PGQEHPEFHPFGLGTEDTPLFPD-MHRQAVL-----AVGGTLLGAELIAQGRTKRVLNLA 138
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GG HH + GFC Y D ++ I Y Q ++ +V+ ID DAH G+G + F D V+
Sbjct: 139 GGLHHAQRGKASGFCIYNDCAVAIEYVRKQYDM-KVLYIDTDAHHGDGVQWIFYHDPHVF 197
Query: 218 ILDMFNPGIY 227
+ G Y
Sbjct: 198 TFSIHETGRY 207
>gi|417760258|ref|ZP_12408284.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|417766916|ref|ZP_12414865.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417768599|ref|ZP_12416526.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|417774430|ref|ZP_12422295.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|417785462|ref|ZP_12433166.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|418675465|ref|ZP_13236756.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|418679801|ref|ZP_13241058.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418693218|ref|ZP_13254281.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|418706491|ref|ZP_13267339.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709210|ref|ZP_13270004.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418717391|ref|ZP_13277053.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|418723865|ref|ZP_13282699.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|418729853|ref|ZP_13288395.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|421087108|ref|ZP_15547949.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|421104756|ref|ZP_15565349.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421120054|ref|ZP_15580368.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|421126066|ref|ZP_15586310.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136771|ref|ZP_15596868.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|45600255|gb|AAS69741.1| histone deacetylase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|400328402|gb|EJO80634.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|400350722|gb|EJP02980.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400356876|gb|EJP13034.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|409943825|gb|EKN89416.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|409949245|gb|EKN99222.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|409951327|gb|EKO05842.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|409962663|gb|EKO26397.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|410018953|gb|EKO85781.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410347140|gb|EKO98059.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|410365066|gb|EKP20461.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430217|gb|EKP74587.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|410436718|gb|EKP85830.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410575763|gb|EKQ38780.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|410577627|gb|EKQ45497.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|410764116|gb|EKR34835.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770546|gb|EKR45765.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410775466|gb|EKR55458.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|410786988|gb|EKR80723.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|455666672|gb|EMF32079.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
gi|455790835|gb|EMF42682.1| histone deacetylase family protein [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456825484|gb|EMF73880.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456969210|gb|EMG10271.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
gi|456988116|gb|EMG23271.1| histone deacetylase family protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 271
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F +D V+ M +YP+
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPK 160
>gi|296505134|ref|YP_003666834.1| acetoin utilization protein AcuC [Bacillus thuringiensis BMB171]
gi|296326186|gb|ADH09114.1| acetoin utilization protein AcuC [Bacillus thuringiensis BMB171]
Length = 388
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423614938|ref|ZP_17590772.1| hypothetical protein IIO_00264 [Bacillus cereus VD115]
gi|401261794|gb|EJR67945.1| hypothetical protein IIO_00264 [Bacillus cereus VD115]
Length = 397
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYS D+ E HPF+ + L GF+ + ++ P A+ E++ VH+E
Sbjct: 14 FIYSDDFQGYSFSPE--HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAYVHTE 71
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y+ + L+ S ++ + +FPN +L VGGT+ A A L
Sbjct: 72 EYIHAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVL 125
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+G
Sbjct: 126 SGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGV 184
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 185 QWSFYDDPNVCTISLHETGRY 205
>gi|359440503|ref|ZP_09230417.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
gi|358037538|dbj|GAA66666.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
Length = 302
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y +F + H F SK+ + Q ++ G + N +VEP+ + E L ++H
Sbjct: 7 LPLVYHPNYSFNF---DPKHRFAMSKFAHLYQHVAKLGLIGDN-LVEPILGTPEPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKELMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|59713550|ref|YP_206325.1| deacetylase [Vibrio fischeri ES114]
gi|59481798|gb|AAW87437.1| deacetylase [Vibrio fischeri ES114]
Length = 298
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + C EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDELYCCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L++R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIERTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G AI++ GG+HH D G GFC D+++ H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLAIAAHHGLSKDSIDKVLIIDSDVHHGDG 164
>gi|421116476|ref|ZP_15576861.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410011936|gb|EKO70042.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 271
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F +D V+ M +YP+
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPK 160
>gi|110636746|ref|YP_676953.1| deacetylase [Cytophaga hutchinsonii ATCC 33406]
gi|110279427|gb|ABG57613.1| deacetylase [Cytophaga hutchinsonii ATCC 33406]
Length = 300
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y+ + + H F K+ I + L EG + ++ + P+ + EDLL
Sbjct: 2 LQIAYHPVYNHP---VPEGHRFPMLKYDLIAEQLVYEGTITESNLTTPVRIASEDLLRSQ 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ L + I L + + +V+ + GTI +A A + G +
Sbjct: 59 DATYVHKLNTLSLSPSEIRKTGFELTAELVYREEVI------MQGTIDSALHALKHGIGM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH + G GFC Y DI L Y +V+++DLD HQGNG K ++
Sbjct: 113 NIAGGTHHAYKEHGEGFCLYNDIILAADYLLANKLAHQVLVVDLDVHQGNGTAKMAEGNT 172
Query: 215 RVYILDMFNPGIYPRDYE 232
+++ M YP E
Sbjct: 173 QIFTFSMHGASNYPAHKE 190
>gi|421090451|ref|ZP_15551243.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410000665|gb|EKO51293.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
Length = 271
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F D V+ M +YP+
Sbjct: 130 DLHQGNGNSFVFQDDPDVFTFSMHQENLYPK 160
>gi|399018524|ref|ZP_10720701.1| deacetylase, histone deacetylase/acetoin utilization protein
[Herbaspirillum sp. CF444]
gi|398101438|gb|EJL91660.1| deacetylase, histone deacetylase/acetoin utilization protein
[Herbaspirillum sp. CF444]
Length = 280
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 125 VQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
Q+++ +P+ R+ G TI A + A E+G A+N+ GG HH AD G GFC + D
Sbjct: 52 AQKEIGFPWSPEMVERSRRSAGATIAACRSAMEQGVAVNLAGGTHHAYADHGAGFCVFND 111
Query: 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
++ + +SRV ++DLD HQGNG ++D V+ L + YP + E
Sbjct: 112 AAVASRLMQAERRVSRVAVVDLDVHQGNGTASILANDDSVFTLSLHGERNYPFEKE 167
>gi|418695445|ref|ZP_13256465.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|421108114|ref|ZP_15568658.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
gi|409956899|gb|EKO15820.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|410006815|gb|EKO60552.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
Length = 271
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F D V+ M +YP+
Sbjct: 130 DLHQGNGNSFIFQDDPDVFTFSMHQENLYPK 160
>gi|308812538|ref|XP_003083576.1| Histone deacetylase superfamily (ISS) [Ostreococcus tauri]
gi|116055457|emb|CAL58125.1| Histone deacetylase superfamily (ISS), partial [Ostreococcus tauri]
Length = 351
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL-----DKNCIVEPLEASKE 88
++P+++ Y L + H F + R+ L+ EG + N + E
Sbjct: 40 RVPVVHHDSYSAPTL--PRGHRFPMGVFQRVRDALAREGIVRVGDSSSNAFSPSRRPTFE 97
Query: 89 DLLVVHSESYLKSLQSS--PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+L HSE + ++ SS P+ + E+ + + LV+R ++ +V GT+L ++
Sbjct: 98 ELAAAHSEEWTRTATSSEGPDAKRLREIG--LPWSDVLVERTLM-----EVSGTMLTVEM 150
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E G A+N GG HH GGGFC D++ +SRVMI+DLD HQG+G
Sbjct: 151 ALECGLAVNTAGGTHHAKGTRGGGFCILNDLATASLAVLNSGRLSRVMIVDLDVHQGDG 209
>gi|423657610|ref|ZP_17632909.1| hypothetical protein IKG_04598 [Bacillus cereus VD200]
gi|401289166|gb|EJR94887.1| hypothetical protein IKG_04598 [Bacillus cereus VD200]
Length = 397
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|197337404|ref|YP_002157959.1| deacetylase [Vibrio fischeri MJ11]
gi|197314656|gb|ACH64105.1| deacetylase [Vibrio fischeri MJ11]
Length = 298
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + C EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDELYCCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L++R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIERTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G AI++ GG+HH D G GFC D+++ H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLAIAAHHGLSKDSIDKVLIIDSDVHHGDG 164
>gi|148556816|ref|YP_001264398.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148502006|gb|ABQ70260.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 315
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 56 FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP 115
F K+G + Q L+ G + +P + + VH Y+ + + VP
Sbjct: 20 FSFDKYGLVMQALAESGA--DPLLHQPDPMPRAWIEAVHDPDYVDEVAA-------CRVP 70
Query: 116 PVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADE 167
PV R++ +P ++V GGT LAAKLA G+A N GG HH AD
Sbjct: 71 PVK-------ARRIGFPVTERVARRAFLAPGGTWLAAKLALRHGYAANGAGGSHHAMADS 123
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G G+C + D+++ + V+ + +R+MI+DLD HQG+G
Sbjct: 124 GAGYCVFNDLAIAANRLIVERDAARIMIVDLDVHQGDG 161
>gi|332663265|ref|YP_004446053.1| histone deacetylase [Haliscomenobacter hydrossis DSM 1100]
gi|332332079|gb|AEE49180.1| Histone deacetylase [Haliscomenobacter hydrossis DSM 1100]
Length = 300
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y + + H F K+ I + L EG + P + +L+ H
Sbjct: 2 LKIAYDPIYKYK---LPEGHRFPMIKYELIPEQLLYEGTVSAENFFNPGPLDEASILLTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y + L+ I L LV+R R GT+ A A++ G A+
Sbjct: 59 TLEYWQRLRDQQLTEREIRAIGFPLTTQ-LVERS-----RTIANGTLQCAFYAQQYGVAM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
NV GG HH A G GFC DI++ +Y + ++++IDLD HQGNG F +D
Sbjct: 113 NVAGGTHHAYAFRGEGFCCTNDIAVAANYLLHHQLLKKILVIDLDVHQGNGTAHIFRNDP 172
Query: 215 RVYILDMFNPGIYP 228
RV+ M YP
Sbjct: 173 RVFTFSMHGAKNYP 186
>gi|408490735|ref|YP_006867104.1| histone deactylase class IV [Psychroflexus torquis ATCC 700755]
gi|408468010|gb|AFU68354.1| histone deactylase class IV [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV--VHSESYLKSLQSSPNVSII 111
H F K+ + + L EG + EP + + VH+ YL+ L N+SI
Sbjct: 18 HRFPMDKYDLLPKQLLHEGTCEPENFFEPQINLDNETYIQSVHTSDYLEQLY---NISIE 74
Query: 112 IEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
V FP LV+R+ R GTI A A E G ++N+ GG HH +D G
Sbjct: 75 PRVARKIGFPLSAELVKRE-----RIITNGTIEACNYALEYGVSMNIAGGTHHAYSDHGE 129
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D ++ HY +++++DLD HQGNG + F D RV+ M YP
Sbjct: 130 AFCMLNDQAIAAHYLLQNKLAKQILVVDLDVHQGNGTAEIFQKDDRVFTFSMHGKSNYP 188
>gi|423582877|ref|ZP_17558988.1| hypothetical protein IIA_04392 [Bacillus cereus VD014]
gi|401211692|gb|EJR18439.1| hypothetical protein IIA_04392 [Bacillus cereus VD014]
Length = 397
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
IYS D FLG HPF+ + L GF+ + I+ P A+ E++ VH
Sbjct: 14 FIYSDD----FLGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVH 69
Query: 95 SESYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--A 144
+E Y+ + L+ S ++ + +FPN +L VGGT+ A A
Sbjct: 70 TEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDA 123
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+
Sbjct: 124 VLSGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGD 182
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F D V + + G Y
Sbjct: 183 GVQWSFYDDPNVCTVSLHETGRY 205
>gi|434405446|ref|YP_007148331.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cylindrospermum stagnale PCC 7417]
gi|428259701|gb|AFZ25651.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cylindrospermum stagnale PCC 7417]
Length = 305
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY DY + H F SK+ ++ + L ++G + P +++ + +VH
Sbjct: 3 LPIIYHSDY---IAPLPPGHRFPMSKFRQLYELLLADGVAHQEQFYAPERPTQDLIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ +Y+++ P I +P + LV R + VGGTIL AKLA G
Sbjct: 60 TPNYVQAYCEGTLEPKAQRRIGLP----WSPALVNRTCV-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDF 210
A N GG HH G GFC + D+++ QL I +++++DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCIFNDLAIASR-VLQQLGIVQKILVVDLDVHQGDGTAFIF 169
Query: 211 SSDSRVYILDM 221
D V+ M
Sbjct: 170 QDDKSVFTFSM 180
>gi|256425815|ref|YP_003126468.1| histone deacetylase superfamily protein [Chitinophaga pinensis DSM
2588]
gi|256040723|gb|ACU64267.1| histone deacetylase superfamily [Chitinophaga pinensis DSM 2588]
Length = 299
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F K+ I L EG + + + P A + +L+ H+ Y + LQ S
Sbjct: 17 HRFPMVKYELIPAQLLREGIISEQQLHIPAPAEESTILLTHTAHYWQQLQHQTLSDKEQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I +P L R+++ GTI A A E G A+NV GG HH AD G G
Sbjct: 77 RIGLPQSP----ALTLREIVIS-----QGTIDCALHAMEHGVALNVAGGTHHAFADRGEG 127
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D ++ +Y Q + +V+IIDLD HQGNG F VY M YP
Sbjct: 128 FCLLNDFAIAANYLLHQQLVKKVLIIDLDVHQGNGTAALFEGRPEVYTFSMHGAHNYP 185
>gi|86608428|ref|YP_477190.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556970|gb|ABD01927.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 305
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F K+ + + L EG + + P +
Sbjct: 1 MSLPIVYHPDYSAP---LPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIES 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ SL++ I + P LVQR + VGGT+L A+LA
Sbjct: 58 VHTPEYVRAYCEGSLEAKLQRRIGLPWSPE------LVQRTC-----RAVGGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ Q + R++I+DLD HQG+G
Sbjct: 107 LRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYP 228
F S+ RV+ M +P
Sbjct: 167 WIFRSEPRVFTFSMHCEANFP 187
>gi|338213016|ref|YP_004657071.1| histone deacetylase superfamily protein [Runella slithyformis DSM
19594]
gi|336306837|gb|AEI49939.1| histone deacetylase superfamily [Runella slithyformis DSM 19594]
Length = 305
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
FD PI+ PL P+ + H F K+ I + L EG + P +
Sbjct: 6 FD-PIYCHPLPVGPN--------GEPHRFPMLKYELIPEQLLYEGSCTSDNFFSPGTLDE 56
Query: 88 EDLLVVHSESY---LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+L VH+ +Y LK L+ S + I P A L++R+ + GTI
Sbjct: 57 RWILDVHTRAYWEDLKQLRISEKMVRRIGFPLSAR----LIERET-----RIAQGTIECT 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A G ++NV GG HH AD G GFC D+++ +Y ++S++++IDLD HQGN
Sbjct: 108 HHALTHGVSMNVAGGTHHAYADRGEGFCLLNDVAIAANYLLKNKSVSKILVIDLDVHQGN 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYE 232
G F ++ RV+ M YP E
Sbjct: 168 GTAVIFQNEPRVFTFSMHGKDNYPLHKE 195
>gi|427706042|ref|YP_007048419.1| histone deacetylase [Nostoc sp. PCC 7107]
gi|427358547|gb|AFY41269.1| Histone deacetylase [Nostoc sp. PCC 7107]
Length = 305
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY P+Y + + H F SK+ ++ + L ++G P ++ + +
Sbjct: 1 MHLPIIYHPNY---VAPLPEGHRFPMSKFSKLYELLLNDGVAQAEQFHTPQVPPQDLIEL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ +L + I + PV + C+ VGGTIL A++A
Sbjct: 58 VHTPDYVRAYCKGTLDAKAQRRIGLPWSPVLVNRTCVA-----------VGGTILTAQMA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 107 LSQGLACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLQKLGLVQKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDM 221
F+ D+ V+ M
Sbjct: 167 FIFADDASVFTFSM 180
>gi|441495684|ref|ZP_20977924.1| Deacetylase [Fulvivirga imtechensis AK7]
gi|441440649|gb|ELR73901.1| Deacetylase [Fulvivirga imtechensis AK7]
Length = 300
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + +P ++ +L H +Y + L+ I
Sbjct: 18 HRFPMEKYELLPEQLLYEGTISTSNFFDPGLPTEAMVLRTHESAYWEKLRDQKLSRSEIR 77
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
L LV R++ V GT L A+ A G ++N+ GG HH + G GFC
Sbjct: 78 RTGFPL-SRQLVDREMTI-----VHGTTLCARYALTHGVSMNIAGGTHHAFTNRGEGFCL 131
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
D+++ H+ Q +++I+DLD HQGNG + F +D+RV+ M YP E
Sbjct: 132 LNDMAVAAHFLLDQQLAGKILIVDLDVHQGNGTAQIFRNDARVFTFSMHGARNYPMQKE 190
>gi|330445427|ref|ZP_08309079.1| histone deacetylase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489618|dbj|GAA03576.1| histone deacetylase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 302
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y S L + + H + +K+ + + + +K + +P +A + +H
Sbjct: 2 LPLVYHPIY--SALSLPEKHRYPINKYRLLYEAIMDSAHANKVSVHQPNKADINKVKALH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ Y+ +L ++ ++P + FP L++R + GGT L LA
Sbjct: 60 APEYVDALCNN-------QLPAAKMRRIGFPWSEALIERTLF-----STGGTQLTVDLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G AI++ GG+HH D G GFC + D++ +A +I +VMIID D H G+G
Sbjct: 108 EHGIAIHLSGGYHHAHHDFGSGFCLFNDLAFAAKHALSYTHIDKVMIIDCDVHHGDG 164
>gi|319785544|ref|YP_004145020.1| histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171432|gb|ADV14970.1| Histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 301
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ PDYD F H F SK+ + + L + G + A L + H
Sbjct: 3 LQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALRTRGLAGPEALSTAEPAPASWLELAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y+ + I VP ++R++ +P +V GGT+LAA+L
Sbjct: 60 AADYVDQV-------INCRVPEK-------IEREIGFPIGPRVSLRAQLATGGTVLAARL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A N GG HH +G GFC + D+++ + ++I+DLD HQG+G
Sbjct: 106 ALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVAALVLLAEGAARNILIVDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
+ D RV+ M YP
Sbjct: 166 ADILADDPRVFTFSMHGDRNYP 187
>gi|390953897|ref|YP_006417655.1| deacetylase [Aequorivita sublithincola DSM 14238]
gi|390419883|gb|AFL80640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Aequorivita sublithincola DSM 14238]
Length = 300
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG E S+ED+L VH++ Y +SL N++I
Sbjct: 18 HRFPMEKYELLPKQLLHEGTCVAENFFESKMPSEEDILAVHTKEYFESL---VNLTIDSR 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L+ R++ + GTI ++ A + G A N+ GG HH + G GF
Sbjct: 75 AARKIGFPLSEALIDREL-----RIAQGTIEGSEHALKYGVAFNIAGGTHHAYTNRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y ++++I+DLD HQGNG + F +D V+ M G YP +
Sbjct: 130 CMLNDQAIASKYLQNNGLANKILIVDLDVHQGNGTAEIFLNDDSVFTFSMHGAGNYPFNK 189
Query: 232 E 232
E
Sbjct: 190 E 190
>gi|423512768|ref|ZP_17489299.1| hypothetical protein IG3_04265 [Bacillus cereus HuA2-1]
gi|402447692|gb|EJV79542.1| hypothetical protein IG3_04265 [Bacillus cereus HuA2-1]
Length = 397
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISSSQVIAPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|434377818|ref|YP_006612462.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-789]
gi|401876375|gb|AFQ28542.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-789]
Length = 388
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|218899820|ref|YP_002448231.1| acetoin utilization protein AcuC [Bacillus cereus G9842]
gi|218541257|gb|ACK93651.1| acetoin utilization protein AcuC [Bacillus cereus G9842]
Length = 388
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|218235910|ref|YP_002369464.1| acetoin utilization protein AcuC [Bacillus cereus B4264]
gi|218163867|gb|ACK63859.1| acetoin utilization protein AcuC [Bacillus cereus B4264]
Length = 388
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|363420376|ref|ZP_09308468.1| acetoin utilization protein [Rhodococcus pyridinivorans AK37]
gi|359735618|gb|EHK84575.1| acetoin utilization protein [Rhodococcus pyridinivorans AK37]
Length = 423
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY G HP + ++ S G L+ V P A DLL +H+
Sbjct: 20 VVWSPDYLDYRWG--PTHPMNPTRLDLTMALSRSLGLLEGVETVRPSPADDTDLLRIHTS 77
Query: 97 SYLKSLQ---SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-----GGTILAAK-LA 147
SY+ +++ S+P + PP + ++P + GGT+ AA+ +A
Sbjct: 78 SYVDAVKRAGSAPEGA----APPADAPHGLGTEDNPIFPRMHEASATLAGGTLAAAREIA 133
Query: 148 KERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH G+G
Sbjct: 134 SGRARRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDHGYDRIAYIDVDAHHGDGV 192
Query: 207 EKDFSSDSRVYILDMFN 223
+ F D RV + +
Sbjct: 193 QHAFLGDPRVLTISLHQ 209
>gi|452201140|ref|YP_007481221.1| NAD-independent protein deacetylase AcuC [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|452106533|gb|AGG03473.1| NAD-independent protein deacetylase AcuC [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 388
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGNLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|430808555|ref|ZP_19435670.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
gi|429499064|gb|EKZ97519.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
Length = 307
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSP-NVSIIIEVPPVALFP--NCLVQRKVLYPFRKQV 137
E A E L +VH+ +Y++ + + +V+ E+ FP + +V+R R+
Sbjct: 42 EAPRADDETLALVHTAAYIEEVSTGQLDVARQREIG----FPWSHEMVERS-----RRSA 92
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
G TI A ++A E+G A N+ GG HH AD+G GFC + D ++ ++ RV +ID
Sbjct: 93 GATIAACRVALEQGIAANLAGGTHHAYADKGAGFCVFNDAAIAARRLQRDGSVRRVAVID 152
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
LD HQGNG D ++ L + YP EA
Sbjct: 153 LDVHQGNGTASILRDDPTIFTLSLHGEKNYPFRKEA 188
>gi|13474726|ref|NP_106295.1| hypothetical protein mll5679 [Mesorhizobium loti MAFF303099]
gi|14025481|dbj|BAB52081.1| mll5679 [Mesorhizobium loti MAFF303099]
Length = 300
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI--VEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + L + G + + EP AS L +
Sbjct: 3 LQIVHHPDYDAGF---ATNHRFPMSKYPLLMEALRARGLASPDALNTTEPAPASW--LKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQV--GGTILAA 144
H+ Y+ + I VP ++R++ +P R Q+ GGTILAA
Sbjct: 58 AHAADYVDQV-------ISCSVPEK-------IEREIGFPVGPRVSLRAQLATGGTILAA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA G A N GG HH +G GFC + D+++ + ++++DLD HQG+
Sbjct: 104 RLALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVASLVLLDEGAAQNILVVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G S + V+ M YP
Sbjct: 164 GTADILSDEPGVFTFSMHGERNYP 187
>gi|339325544|ref|YP_004685237.1| deacetylase [Cupriavidus necator N-1]
gi|338165701|gb|AEI76756.1| deacetylase histone deacetylase family [Cupriavidus necator N-1]
Length = 352
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+VE A + LL+ H+ Y+++ + + QR++ +P+
Sbjct: 86 LVEAPRAGDDALLLAHTPGYVQAASTGTL--------------DAARQREIGFPWSEAMV 131
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ +
Sbjct: 132 ERSRRSAGATIEACRTALREGVAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAV 191
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
RV ++DLD HQGNG D V+ L + YP EA
Sbjct: 192 RRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNYPFRKEA 234
>gi|423650564|ref|ZP_17626134.1| hypothetical protein IKA_04351 [Bacillus cereus VD169]
gi|401281723|gb|EJR87629.1| hypothetical protein IKA_04351 [Bacillus cereus VD169]
Length = 397
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423584808|ref|ZP_17560895.1| hypothetical protein IIE_00220 [Bacillus cereus VD045]
gi|423631383|ref|ZP_17607130.1| hypothetical protein IK5_04233 [Bacillus cereus VD154]
gi|401235000|gb|EJR41473.1| hypothetical protein IIE_00220 [Bacillus cereus VD045]
gi|401263956|gb|EJR70072.1| hypothetical protein IK5_04233 [Bacillus cereus VD154]
Length = 397
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423411542|ref|ZP_17388662.1| hypothetical protein IE1_00846 [Bacillus cereus BAG3O-2]
gi|423432671|ref|ZP_17409675.1| hypothetical protein IE7_04487 [Bacillus cereus BAG4O-1]
gi|401104867|gb|EJQ12835.1| hypothetical protein IE1_00846 [Bacillus cereus BAG3O-2]
gi|401115804|gb|EJQ23651.1| hypothetical protein IE7_04487 [Bacillus cereus BAG4O-1]
Length = 397
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423358245|ref|ZP_17335748.1| hypothetical protein IC1_00225 [Bacillus cereus VD022]
gi|423560825|ref|ZP_17537101.1| hypothetical protein II5_00229 [Bacillus cereus MSX-A1]
gi|401085932|gb|EJP94164.1| hypothetical protein IC1_00225 [Bacillus cereus VD022]
gi|401202670|gb|EJR09520.1| hypothetical protein II5_00229 [Bacillus cereus MSX-A1]
Length = 397
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|410677064|ref|YP_006929435.1| acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
gi|409176193|gb|AFV20498.1| acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGNLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|196040911|ref|ZP_03108209.1| acetoin utilization protein AcuC [Bacillus cereus NVH0597-99]
gi|196028365|gb|EDX66974.1| acetoin utilization protein AcuC [Bacillus cereus NVH0597-99]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPQMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423386180|ref|ZP_17363436.1| hypothetical protein ICE_03926 [Bacillus cereus BAG1X1-2]
gi|423527484|ref|ZP_17503929.1| hypothetical protein IGE_01036 [Bacillus cereus HuB1-1]
gi|401634831|gb|EJS52594.1| hypothetical protein ICE_03926 [Bacillus cereus BAG1X1-2]
gi|402452853|gb|EJV84663.1| hypothetical protein IGE_01036 [Bacillus cereus HuB1-1]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIITPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423400479|ref|ZP_17377652.1| hypothetical protein ICW_00877 [Bacillus cereus BAG2X1-2]
gi|423457084|ref|ZP_17433881.1| hypothetical protein IEI_00224 [Bacillus cereus BAG5X2-1]
gi|423478815|ref|ZP_17455530.1| hypothetical protein IEO_04273 [Bacillus cereus BAG6X1-1]
gi|401148861|gb|EJQ56344.1| hypothetical protein IEI_00224 [Bacillus cereus BAG5X2-1]
gi|401655203|gb|EJS72737.1| hypothetical protein ICW_00877 [Bacillus cereus BAG2X1-2]
gi|402426846|gb|EJV58961.1| hypothetical protein IEO_04273 [Bacillus cereus BAG6X1-1]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423389025|ref|ZP_17366251.1| hypothetical protein ICG_00873 [Bacillus cereus BAG1X1-3]
gi|423417418|ref|ZP_17394507.1| hypothetical protein IE3_00890 [Bacillus cereus BAG3X2-1]
gi|401107697|gb|EJQ15642.1| hypothetical protein IE3_00890 [Bacillus cereus BAG3X2-1]
gi|401642300|gb|EJS60011.1| hypothetical protein ICG_00873 [Bacillus cereus BAG1X1-3]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|374596386|ref|ZP_09669390.1| histone deacetylase superfamily [Gillisia limnaea DSM 15749]
gi|373871025|gb|EHQ03023.1| histone deacetylase superfamily [Gillisia limnaea DSM 15749]
Length = 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP + +L VH E+Y +SLQ
Sbjct: 18 HRFPMEKYELLPKQLLHEGSCTEANFFEPEMPEEAAILAVHDENYFRSLQD--------- 68
Query: 114 VPPVALFPNCLVQRKVLYPF------RKQV--GGTILAAKLAKERGWAINVGGGFHHCSA 165
L + +RK+ +P R+Q+ GTI A++ A + G A+N+ GG HH
Sbjct: 69 -----LSLDKRAERKIGFPLSEALVSREQIIADGTIKASEFALQYGIAMNIAGGTHHAYT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y +++I+DLD HQGNG + F++D V+ +
Sbjct: 124 NHGEAFCLLNDQAIAARYLQKNKLAKKILIVDLDVHQGNGTAEIFANDDSVFTFSIHGRN 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|365158548|ref|ZP_09354740.1| hypothetical protein HMPREF1014_00203 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423438101|ref|ZP_17415082.1| hypothetical protein IE9_04282 [Bacillus cereus BAG4X12-1]
gi|363626421|gb|EHL77404.1| hypothetical protein HMPREF1014_00203 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401119714|gb|EJQ27525.1| hypothetical protein IE9_04282 [Bacillus cereus BAG4X12-1]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|124266700|ref|YP_001020704.1| hypothetical protein Mpe_A1507 [Methylibium petroleiphilum PM1]
gi|124259475|gb|ABM94469.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 324
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-LQSSPNVSIII 112
H F +K+ + L++E L +VE AS +L + H +++ + L + + +
Sbjct: 17 HRFPMAKYRMLRDRLAAE--LPALRLVEAPAASDGELALAHEPAWVNAVLDGTLSATQQR 74
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
E+ FP +V+R R+ VG TI AA+ A + G A N+ GG HH SAD+G G
Sbjct: 75 EIG----FPWSEAMVERS-----RRSVGATIAAARRALDEGVAANLAGGTHHASADKGSG 125
Query: 171 FCAYADISLCIH-----YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+C + DI++ + + + RV +IDLD HQGNG F D V+ L +
Sbjct: 126 YCVFNDIAVAARLMQAEWHRARRTLLRVAVIDLDVHQGNGTAAIFRDDPTVFTLSLHGEK 185
Query: 226 IYPRDYEA 233
+P EA
Sbjct: 186 NFPFRKEA 193
>gi|284037371|ref|YP_003387301.1| histone deacetylase [Spirosoma linguale DSM 74]
gi|283816664|gb|ADB38502.1| Histone deacetylase [Spirosoma linguale DSM 74]
Length = 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y L + + H F K+ I + L EG + P L VH
Sbjct: 2 LQIAFSPVYR---LRLPEGHRFPMLKYELIHEQLLYEGTCTEANFFGPEPVDDRWALGVH 58
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++L++ P + I P L P + + ++ GTI +LA+ G
Sbjct: 59 TAEYVQALKTCTVDPKMMRRIGFP---LTPELIDREWII------TQGTIECTQLAQRDG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+N+ GG HH D G GFC D+ + +Y +++++DLD HQGNG F
Sbjct: 110 VAMNIAGGTHHAFPDRGEGFCMLNDVGIAANYLLEIGQAKKILVVDLDVHQGNGTAVMFQ 169
Query: 212 SDSRVYILDMFNPGIYP 228
++SRV+ M YP
Sbjct: 170 TESRVFTFSMHGADNYP 186
>gi|170078236|ref|YP_001734874.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. PCC
7002]
gi|190358879|sp|P28606.2|Y1628_SYNP2 RecName: Full=Uncharacterized protein SYNPCC7002_A1628
gi|169885905|gb|ACA99618.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. PCC
7002]
Length = 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 3 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 60 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDM 221
D V+ M
Sbjct: 171 DDPTVFTFSM 180
>gi|423440595|ref|ZP_17417501.1| hypothetical protein IEA_00925 [Bacillus cereus BAG4X2-1]
gi|423449256|ref|ZP_17426135.1| hypothetical protein IEC_03864 [Bacillus cereus BAG5O-1]
gi|423463659|ref|ZP_17440427.1| hypothetical protein IEK_00846 [Bacillus cereus BAG6O-1]
gi|423533012|ref|ZP_17509430.1| hypothetical protein IGI_00844 [Bacillus cereus HuB2-9]
gi|423541725|ref|ZP_17518116.1| hypothetical protein IGK_03817 [Bacillus cereus HuB4-10]
gi|423622255|ref|ZP_17598033.1| hypothetical protein IK3_00853 [Bacillus cereus VD148]
gi|401128705|gb|EJQ36394.1| hypothetical protein IEC_03864 [Bacillus cereus BAG5O-1]
gi|401171258|gb|EJQ78491.1| hypothetical protein IGK_03817 [Bacillus cereus HuB4-10]
gi|401261395|gb|EJR67555.1| hypothetical protein IK3_00853 [Bacillus cereus VD148]
gi|402418726|gb|EJV51015.1| hypothetical protein IEA_00925 [Bacillus cereus BAG4X2-1]
gi|402421203|gb|EJV53463.1| hypothetical protein IEK_00846 [Bacillus cereus BAG6O-1]
gi|402464392|gb|EJV96087.1| hypothetical protein IGI_00844 [Bacillus cereus HuB2-9]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYIHAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|113867397|ref|YP_725886.1| histone deacetylase family deacetylase [Ralstonia eutropha H16]
gi|113526173|emb|CAJ92518.1| Deacetylase, histone deacetylase family [Ralstonia eutropha H16]
Length = 369
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+VE A + LL+ H+ Y+++ + + QR++ +P+
Sbjct: 103 LVEAPRAGDDALLLAHTPGYVQAASAGTL--------------DAARQREIGFPWSEAMV 148
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ +
Sbjct: 149 ERSRRSAGATIEACRTALREGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAV 208
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
RV ++DLD HQGNG D V+ L + YP EA
Sbjct: 209 RRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNYPFRKEA 251
>gi|99643283|emb|CAK22358.1| class 4 HDAC protein [Platynereis dumerilii]
Length = 322
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ DY +S L K H F K+ + +L + + + EP E S + +VH
Sbjct: 20 LPIIHHHDY-VSEL--PKGHRFAMKKFHGVFNYLLKDNIIQMKQVAEPDEVSSQVAGLVH 76
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y++ + E N + +L R + GGT+L LAKERG A
Sbjct: 77 TPEYVEKFFTGKTSE--KEQRRTGFKWN----KGLLRRCRLEAGGTVLGCHLAKERGLAC 130
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GGG HH G G+C D+++ + RV+I+DLD HQG+G F
Sbjct: 131 STGGGTHHAFPSYGSGYCLLNDLAIAAENSVATGVAERVLIVDLDVHQGDGTANIFEDSD 190
Query: 215 RVYILDMFNPGIYP 228
++ M +P
Sbjct: 191 SIFTFSMHCQSNFP 204
>gi|423521451|ref|ZP_17497924.1| hypothetical protein IGC_00834 [Bacillus cereus HuA4-10]
gi|401177653|gb|EJQ84840.1| hypothetical protein IGC_00834 [Bacillus cereus HuA4-10]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|159469207|ref|XP_001692759.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158278012|gb|EDP03778.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 278
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK-WGRICQFLSSEGFLDKNCI-VEPLEASKEDLLV 92
LP++Y PDY + P S+ + RI + + EG + I V P E+LL+
Sbjct: 1 LPVVYHPDYSAPVMPPGHRFPMASTAVFRRIYELVLEEGIAAPHQIHVPPRLPPDEELLL 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH YL +L SS + V + P V+R + +V GT+L A+LA G
Sbjct: 61 VHDPDYL-ALFSSGRLDEE-RVRRIGFGPA--VRRT-----KAEVAGTLLTARLALSGGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH G G+C D+++ + + RV+++DLD HQG+G F
Sbjct: 112 AVNTAGGTHHAFPSHGSGYCILNDLAVTAEVLLAEGAVRRVLVLDLDVHQGDGTAFIFRD 171
Query: 213 DSRVYILDMFNPGIYP 228
V+ L + +P
Sbjct: 172 RPDVFTLSVHAASNFP 187
>gi|669044|emb|CAA78368.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 3 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 60 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDM 221
D V+ M
Sbjct: 171 DDPTVFTFSM 180
>gi|334121393|ref|ZP_08495463.1| Histone deacetylase [Microcoleus vaginatus FGP-2]
gi|333455107|gb|EGK83768.1| Histone deacetylase [Microcoleus vaginatus FGP-2]
Length = 305
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY DY + H F +K+ + Q L ++G DK+ P +E + +VH
Sbjct: 3 LPIIYHEDY---VAPLPPDHRFPMAKFRMLYQMLLADGVADKSQFHAPELPPQEWIELVH 59
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY+++ + + I +P + LV R V GT+L AKLA + G
Sbjct: 60 DHSYVQAYCNGTLDNKATRRIGLP----WSRALVNRTC-----TAVAGTVLTAKLALDYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKNGLVRKVLIVDLDVHQGDGTAVIFQ 170
Query: 212 SDSRVYILDM 221
DS V+ M
Sbjct: 171 DDSSVFTFSM 180
>gi|383763016|ref|YP_005441998.1| acetoin utilization protein AcuC [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383284|dbj|BAM00101.1| acetoin utilization protein AcuC [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 303
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
P++YSPD+ + + H F +K+G++ ++L +G + P A++ L +
Sbjct: 1 MTFPILYSPDH---VAPLPEGHRFPMAKFGKVYEWLIRDGVASLDQFHLPQPATEAQLAL 57
Query: 93 VHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H+ +Y+++ L+ + + + FP LV+R + +G T+LAA+LA
Sbjct: 58 AHNPAYIRAYLEGTLDARSRRRIG----FPWSERLVRRTL-----TALGSTVLAAELALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GG HH D G G+C + D+++ + Q RV+I+DLD HQG+G
Sbjct: 109 HGLACSTAGGTHHAFHDFGSGYCIFNDLAVAARWVKAQGLARRVLIVDLDVHQGDGTASI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
+D + M +P
Sbjct: 169 LQNDPDLVTFSMHCEANFP 187
>gi|423484238|ref|ZP_17460928.1| hypothetical protein IEQ_04016 [Bacillus cereus BAG6X1-2]
gi|401139264|gb|EJQ46827.1| hypothetical protein IEQ_04016 [Bacillus cereus BAG6X1-2]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAYIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|375148298|ref|YP_005010739.1| histone deacetylase [Niastella koreensis GR20-10]
gi|361062344|gb|AEW01336.1| Histone deacetylase [Niastella koreensis GR20-10]
Length = 307
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + + + P E +L H E+Y++ LQ
Sbjct: 24 HRFPMLKYELIPEQLLYEGTITSHNLFAPAACDDEIVLWTHDEAYVQKLQQQT------- 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVG--------GTILAAKLAKERGWAINVGGGFHHCSA 165
+ QR + +P Q+ GTI A E G A+NV GG HH
Sbjct: 77 -------LSAREQRHIGFPQSPQLTRREFVIAQGTIDCCDYAFEHGVALNVAGGTHHAFT 129
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC D + +Y + R++IIDLD HQGNG F + RV+ M
Sbjct: 130 DRGEGFCLLNDFGVAANYLLKKELARRIIIIDLDVHQGNGTASIFEHEPRVFTFSMHGAH 189
Query: 226 IYP 228
YP
Sbjct: 190 NYP 192
>gi|423598040|ref|ZP_17574040.1| hypothetical protein III_00842 [Bacillus cereus VD078]
gi|401237501|gb|EJR43952.1| hypothetical protein III_00842 [Bacillus cereus VD078]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423377489|ref|ZP_17354773.1| hypothetical protein IC9_00842 [Bacillus cereus BAG1O-2]
gi|401638338|gb|EJS56088.1| hypothetical protein IC9_00842 [Bacillus cereus BAG1O-2]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKCAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|42783850|ref|NP_981097.1| acetoin utilization protein AcuC [Bacillus cereus ATCC 10987]
gi|42739780|gb|AAS43705.1| acetoin utilization protein AcuC [Bacillus cereus ATCC 10987]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|402563821|ref|YP_006606545.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-771]
gi|401792473|gb|AFQ18512.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-771]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|206978111|ref|ZP_03238994.1| acetoin utilization protein AcuC [Bacillus cereus H3081.97]
gi|301056175|ref|YP_003794386.1| acetoin utilization protein [Bacillus cereus biovar anthracis str.
CI]
gi|206743647|gb|EDZ55071.1| acetoin utilization protein AcuC [Bacillus cereus H3081.97]
gi|300378344|gb|ADK07248.1| acetoin utilization protein [Bacillus cereus biovar anthracis str.
CI]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|206969663|ref|ZP_03230617.1| acetoin utilization protein AcuC [Bacillus cereus AH1134]
gi|206735351|gb|EDZ52519.1| acetoin utilization protein AcuC [Bacillus cereus AH1134]
Length = 388
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423452027|ref|ZP_17428880.1| hypothetical protein IEE_00771 [Bacillus cereus BAG5X1-1]
gi|401142098|gb|EJQ49647.1| hypothetical protein IEE_00771 [Bacillus cereus BAG5X1-1]
Length = 397
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|225866649|ref|YP_002752027.1| acetoin utilization protein AcuC [Bacillus cereus 03BB102]
gi|225789606|gb|ACO29823.1| acetoin utilization protein AcuC [Bacillus cereus 03BB102]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|217962153|ref|YP_002340723.1| acetoin utilization protein AcuC [Bacillus cereus AH187]
gi|222098139|ref|YP_002532196.1| acetoin utilization protein [Bacillus cereus Q1]
gi|375286669|ref|YP_005107108.1| acetoin utilization protein AcuC [Bacillus cereus NC7401]
gi|217068269|gb|ACJ82519.1| acetoin utilization protein AcuC [Bacillus cereus AH187]
gi|221242197|gb|ACM14907.1| acetoin utilization protein [Bacillus cereus Q1]
gi|358355196|dbj|BAL20368.1| acetoin utilization protein AcuC [Bacillus cereus NC7401]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423612844|ref|ZP_17588705.1| hypothetical protein IIM_03559 [Bacillus cereus VD107]
gi|401244832|gb|EJR51191.1| hypothetical protein IIM_03559 [Bacillus cereus VD107]
Length = 397
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYS D+ E HPF+ + L GF+ + ++ P A+ E++ +H+E
Sbjct: 14 FIYSDDFRGYSFSPE--HPFNQLRVTLTYDLLQKSGFISPSQVIPPRMATDEEIAFIHTE 71
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y+ + L+ S ++ + +FPN +L VGGT+ A A L
Sbjct: 72 EYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVL 125
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+G
Sbjct: 126 SGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGV 184
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 185 QWSFYDDPNVCTISLHETGRY 205
>gi|49481428|ref|YP_038712.1| acetoin utilization protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332984|gb|AAT63630.1| acetoin utilization protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IALTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|388569916|ref|ZP_10156296.1| histone deacetylase [Hydrogenophaga sp. PBC]
gi|388262888|gb|EIK88498.1| histone deacetylase [Hydrogenophaga sp. PBC]
Length = 331
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F +K+ ++ + L+ E + + E L AS +L +VH+ +Y+ ++ S SP +
Sbjct: 17 HRFPMAKYAQLRERLARE--CPEVEMHEALPASDGELTLVHTPAYIDAVASGTLSPALQR 74
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEG 168
I P + + +R R+ VG T+ AA+ + + G A N+ GG HH AD+G
Sbjct: 75 EIGFP----WSTAMAERA-----RRSVGATLQAARRVMGQGGGLAANLAGGTHHAYADKG 125
Query: 169 GGFCAYADISLCIHYAFVQLNIS-------RVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GGFC + D ++ + RV I+DLD HQGNG + F+ D+ V+ L +
Sbjct: 126 GGFCVFNDFAVAARLMQAEHARRHDRREPLRVAIVDLDVHQGNGTARIFAGDASVFTLSL 185
Query: 222 FNPGIYP 228
+P
Sbjct: 186 HGAKNFP 192
>gi|71280821|ref|YP_270049.1| histone deacetylase [Colwellia psychrerythraea 34H]
gi|71146561|gb|AAZ27034.1| histone deacetylase family protein [Colwellia psychrerythraea 34H]
Length = 300
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L + G + N +P + +++ V+
Sbjct: 4 PLVFHPIY--SQLELPIRHRFPIEKYVGIRNALVANG-VPNNWFKKPTPVNPDNVKTVYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
+Y+ L ++ ++ A+ R++ +P+ +Q VGGTI+ A+LA
Sbjct: 61 PTYIHQLINN-------QLDSKAM-------RRIGFPWSQQLIERTLTAVGGTIMTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E G ++N+ GG+HH A+ G GFC D+ L NIS+V+I D D HQG+G
Sbjct: 107 LEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPR 229
K S++ V+ + + +P
Sbjct: 167 KLASNNQNVFTVSIHGEKNFPH 188
>gi|423495557|ref|ZP_17472201.1| hypothetical protein IEW_04455 [Bacillus cereus CER057]
gi|423497647|ref|ZP_17474264.1| hypothetical protein IEY_00874 [Bacillus cereus CER074]
gi|401150464|gb|EJQ57923.1| hypothetical protein IEW_04455 [Bacillus cereus CER057]
gi|401162127|gb|EJQ69485.1| hypothetical protein IEY_00874 [Bacillus cereus CER074]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|196043782|ref|ZP_03111019.1| acetoin utilization protein AcuC [Bacillus cereus 03BB108]
gi|300118894|ref|ZP_07056607.1| acetoin utilization protein [Bacillus cereus SJ1]
gi|376268604|ref|YP_005121316.1| NAD-independent protein deacetylase AcuC [Bacillus cereus F837/76]
gi|196025118|gb|EDX63788.1| acetoin utilization protein AcuC [Bacillus cereus 03BB108]
gi|298723739|gb|EFI64468.1| acetoin utilization protein [Bacillus cereus SJ1]
gi|364514404|gb|AEW57803.1| NAD-independent protein deacetylase AcuC [Bacillus cereus F837/76]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423470868|ref|ZP_17447612.1| hypothetical protein IEM_02174 [Bacillus cereus BAG6O-2]
gi|423557758|ref|ZP_17534060.1| hypothetical protein II3_02962 [Bacillus cereus MC67]
gi|401192295|gb|EJQ99311.1| hypothetical protein II3_02962 [Bacillus cereus MC67]
gi|402434606|gb|EJV66644.1| hypothetical protein IEM_02174 [Bacillus cereus BAG6O-2]
Length = 397
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|345867518|ref|ZP_08819529.1| histone deacetylase domain protein [Bizionia argentinensis JUB59]
gi|344048186|gb|EGV43799.1| histone deacetylase domain protein [Bizionia argentinensis JUB59]
Length = 300
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP+ +L VH+ Y L N+++ +
Sbjct: 18 HRFPMLKYELLPKQLLYEGTCSEANFFEPVIPDDRYILQVHTAEYYNHLL---NLTLDAK 74
Query: 114 VPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+V+ GTI A+K A E G A+N+ GG HH ++ G GF
Sbjct: 75 AARKIGFPLSAELIKREVII-----ADGTIKASKFALENGIAMNIAGGTHHAYSNRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 130 CLLNDQAIAARYLQKHQLAEKILIVDLDVHQGNGTAEIFQNDPSVFTFSMHGKSNYPFKK 189
Query: 232 EARRFIDQKVEVVVNNQ 248
E +D +E N+Q
Sbjct: 190 EESD-LDIALETDSNDQ 205
>gi|384182477|ref|YP_005568239.1| acetoin utilization protein AcuC [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328561|gb|ADY23821.1| acetoin utilization protein AcuC [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|30264739|ref|NP_847116.1| acetoin utilization protein AcuC [Bacillus anthracis str. Ames]
gi|47530212|ref|YP_021561.1| acetoin utilization protein AcuC [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187557|ref|YP_030810.1| acetoin utilization protein AcuC [Bacillus anthracis str. Sterne]
gi|65322036|ref|ZP_00394995.1| COG0123: Deacetylases, including yeast histone deacetylase and
acetoin utilization protein [Bacillus anthracis str.
A2012]
gi|165869634|ref|ZP_02214292.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0488]
gi|167633944|ref|ZP_02392267.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0442]
gi|167638079|ref|ZP_02396357.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0193]
gi|170685701|ref|ZP_02876924.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0465]
gi|177651273|ref|ZP_02934104.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0174]
gi|190568293|ref|ZP_03021201.1| acetoin utilization protein AcuC [Bacillus anthracis str.
Tsiankovskii-I]
gi|218905895|ref|YP_002453729.1| acetoin utilization protein AcuC [Bacillus cereus AH820]
gi|227817458|ref|YP_002817467.1| acetoin utilization protein AcuC [Bacillus anthracis str. CDC 684]
gi|229600740|ref|YP_002868947.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0248]
gi|254687477|ref|ZP_05151333.1| acetoin utilization protein AcuC [Bacillus anthracis str.
CNEVA-9066]
gi|254736778|ref|ZP_05194484.1| acetoin utilization protein AcuC [Bacillus anthracis str. Western
North America USA6153]
gi|254741815|ref|ZP_05199502.1| acetoin utilization protein AcuC [Bacillus anthracis str. Kruger B]
gi|254754587|ref|ZP_05206622.1| acetoin utilization protein AcuC [Bacillus anthracis str. Vollum]
gi|254757419|ref|ZP_05209446.1| acetoin utilization protein AcuC [Bacillus anthracis str. Australia
94]
gi|421511203|ref|ZP_15958081.1| acetoin utilization protein AcuC [Bacillus anthracis str. UR-1]
gi|421639282|ref|ZP_16079875.1| acetoin utilization protein AcuC [Bacillus anthracis str. BF1]
gi|30259414|gb|AAP28602.1| acetoin utilization protein AcuC [Bacillus anthracis str. Ames]
gi|47505360|gb|AAT34036.1| acetoin utilization protein AcuC [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181484|gb|AAT56860.1| acetoin utilization protein AcuC [Bacillus anthracis str. Sterne]
gi|164714463|gb|EDR19982.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0488]
gi|167513896|gb|EDR89264.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0193]
gi|167530745|gb|EDR93447.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0442]
gi|170670165|gb|EDT20905.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0465]
gi|172083099|gb|EDT68161.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0174]
gi|190560549|gb|EDV14526.1| acetoin utilization protein AcuC [Bacillus anthracis str.
Tsiankovskii-I]
gi|218537946|gb|ACK90344.1| acetoin utilization protein AcuC [Bacillus cereus AH820]
gi|227006483|gb|ACP16226.1| acetoin utilization protein AcuC [Bacillus anthracis str. CDC 684]
gi|229265148|gb|ACQ46785.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0248]
gi|401818776|gb|EJT17968.1| acetoin utilization protein AcuC [Bacillus anthracis str. UR-1]
gi|403393701|gb|EJY90944.1| acetoin utilization protein AcuC [Bacillus anthracis str. BF1]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|52140837|ref|YP_085992.1| acetoin utilization protein [Bacillus cereus E33L]
gi|51974306|gb|AAU15856.1| acetoin utilization protein [Bacillus cereus E33L]
Length = 388
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|428301891|ref|YP_007140197.1| histone deacetylase [Calothrix sp. PCC 6303]
gi|428238435|gb|AFZ04225.1| Histone deacetylase [Calothrix sp. PCC 6303]
Length = 303
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F +K+ + L ++G +P ++ + ++H
Sbjct: 3 LPIIYHPDYVTE---LPEGHRFPMAKFSLLYDLLLADGVAKSEQFYQPTIPQQDLIELIH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILAAK 145
+ Y+ + Q + + QR++ P+ + VGGTIL A+
Sbjct: 60 TPEYVNAYCQGTLDEK---------------AQRRIGLPWSRGLVNRTCTAVGGTILTAQ 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E G A N GG HH D G GFC + D+++ Q R++I+DLD HQG+G
Sbjct: 105 KALECGLACNTAGGTHHAFPDYGSGFCIFNDLAIACRVLQRQHLAKRILIVDLDVHQGDG 164
Query: 206 HEKDFSSDSRVYILDM 221
F D V+ M
Sbjct: 165 TAFIFQDDDSVFTFSM 180
>gi|393776833|ref|ZP_10365127.1| histone deacetylase [Ralstonia sp. PBA]
gi|392716190|gb|EIZ03770.1| histone deacetylase [Ralstonia sp. PBA]
Length = 310
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFR 134
+ E AS DLL+ H++ Y++ + + P I P + +V+R R
Sbjct: 39 ALREAPRASDADLLLAHTDEYVQKVSAGTLEPARQREIGFP----WSEAMVERS-----R 89
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY----AFVQLNI 190
+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ A +
Sbjct: 90 RSAGATIAACRQAMRDGIAVNLAGGTHHAYADKGGGFCVFNDSAIAARRLQQDADAEGRQ 149
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
RV +IDLD HQGNG D+ V+ L + YP EA
Sbjct: 150 LRVAVIDLDVHQGNGTASILRDDATVFTLSLHGERNYPFRKEA 192
>gi|118479808|ref|YP_896959.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
gi|118419033|gb|ABK87452.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
Length = 397
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423395057|ref|ZP_17372258.1| hypothetical protein ICU_00751 [Bacillus cereus BAG2X1-1]
gi|423405919|ref|ZP_17383068.1| hypothetical protein ICY_00604 [Bacillus cereus BAG2X1-3]
gi|401655828|gb|EJS73356.1| hypothetical protein ICU_00751 [Bacillus cereus BAG2X1-1]
gi|401660588|gb|EJS78066.1| hypothetical protein ICY_00604 [Bacillus cereus BAG2X1-3]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAYIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423660489|ref|ZP_17635658.1| hypothetical protein IKM_00886 [Bacillus cereus VDM022]
gi|401302397|gb|EJS07976.1| hypothetical protein IKM_00886 [Bacillus cereus VDM022]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423573644|ref|ZP_17549763.1| hypothetical protein II9_00865 [Bacillus cereus MSX-D12]
gi|401213975|gb|EJR20709.1| hypothetical protein II9_00865 [Bacillus cereus MSX-D12]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IALTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423549589|ref|ZP_17525916.1| hypothetical protein IGW_00220 [Bacillus cereus ISP3191]
gi|401190848|gb|EJQ97886.1| hypothetical protein IGW_00220 [Bacillus cereus ISP3191]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|423355153|ref|ZP_17332778.1| hypothetical protein IAU_03227 [Bacillus cereus IS075]
gi|423373377|ref|ZP_17350716.1| hypothetical protein IC5_02432 [Bacillus cereus AND1407]
gi|423570899|ref|ZP_17547144.1| hypothetical protein II7_04120 [Bacillus cereus MSX-A12]
gi|423603654|ref|ZP_17579547.1| hypothetical protein IIK_00235 [Bacillus cereus VD102]
gi|401085330|gb|EJP93573.1| hypothetical protein IAU_03227 [Bacillus cereus IS075]
gi|401096341|gb|EJQ04388.1| hypothetical protein IC5_02432 [Bacillus cereus AND1407]
gi|401203526|gb|EJR10365.1| hypothetical protein II7_04120 [Bacillus cereus MSX-A12]
gi|401246418|gb|EJR52765.1| hypothetical protein IIK_00235 [Bacillus cereus VD102]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|407647096|ref|YP_006810855.1| acetoin dehydrogenase [Nocardia brasiliensis ATCC 700358]
gi|407309980|gb|AFU03881.1| acetoin dehydrogenase [Nocardia brasiliensis ATCC 700358]
Length = 425
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP ++ S G LD ++ P A + DLL +H+ +Y+ +++ +
Sbjct: 40 HPMKPARLKFTMALAESLGLLDGVELLAPAAAERADLLRIHTPAYIDAVEHAVAPEGAPL 99
Query: 114 VPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFHHCS 164
PP L FP V+ VGGT+ AA+ E A+++GGG HH
Sbjct: 100 APPYGLGSPDNPVFPGMHQAASVI------VGGTLAAARAIAEGRSNRAVSIGGGMHHAM 153
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
AD GFC Y D ++ I + + R+ +D+D H G+G ++ F D RV +
Sbjct: 154 ADSAAGFCVYNDAAVAISW-LLDHGFDRIAYLDVDVHHGDGVQRAFYGDPRVLTI 207
>gi|170705511|ref|ZP_02895975.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0389]
gi|170129636|gb|EDS98499.1| acetoin utilization protein AcuC [Bacillus anthracis str. A0389]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|115379349|ref|ZP_01466456.1| deacetylase [Stigmatella aurantiaca DW4/3-1]
gi|310825011|ref|YP_003957369.1| histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
gi|115363631|gb|EAU62759.1| deacetylase [Stigmatella aurantiaca DW4/3-1]
gi|309398083|gb|ADO75542.1| Histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 487
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 18 RNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN 77
R +L K + ++P+ Y Y + F +E + + +L G +
Sbjct: 2 RAWLLDWKKRLRLDKARVPIFYDEPYRLPFGCLEAQQGLEPRQVDFTTGYLVERGIIQAE 61
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
I P S L VH +YL++L+ ++ I V P + + VL R+
Sbjct: 62 DIHRPRPVSYAQLARVHDAAYLEALEEPETLASIFAVDPSEVPVDT-----VLDTVRRIC 116
Query: 138 GGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
GGT+ AA+ L+ +R A+N+ GGFHH + D GGGFC DI++ I + V +
Sbjct: 117 GGTLEAARWALSTQRP-AVNMAGGFHHAAPDHGGGFCVLNDIAVAIATLRHEGFDGPVGV 175
Query: 196 IDLDAHQGNGHEKDFSSDSRVYI 218
+DLDAH +G D++V++
Sbjct: 176 LDLDAHPADGTAACLEGDAQVWV 198
>gi|399069021|ref|ZP_10749252.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
gi|398045378|gb|EJL38108.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
Length = 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ R+ L +EG + + P + LL+VH +Y++ + +S+ +
Sbjct: 26 HRFPMDKFSRLAAVLEAEGVAGPDGFIRPEPIDLDSLLLVHDAAYVRGVV---ELSLPAD 82
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
V PN V R GGT+ AA+LA E G A N GG HH AD G GFC
Sbjct: 83 VVRRIGMPNT---ESVAARARAATGGTLAAARLALEHGIACNTAGGSHHAQADTGAGFCV 139
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+++ + + +V+++DLD HQG+G + F D V+ M +P
Sbjct: 140 FNDVAVAARRLQAEGAVRQVLVVDLDVHQGDGTARIFEGDPSVFTFSMHAEKNFP 194
>gi|405355313|ref|ZP_11024539.1| Deacetylase [Chondromyces apiculatus DSM 436]
gi|397091655|gb|EJJ22457.1| Deacetylase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 279
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+ + + L G L I E +EDL VH+ YL +L +
Sbjct: 3 KYRLLREALLERGVLSPAAITESTPCPREDLERVHTPRYLDALFHGTLTEAELRRLGFPW 62
Query: 120 FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISL 179
P LVQR F V GTI A + A G N+ GG HH D G GFC + DI++
Sbjct: 63 SPG-LVQR-----FAAAVAGTIDAGRAALRDGIGGNLSGGTHHGFPDHGEGFCVFNDIAV 116
Query: 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
I + + R +++DLD HQGNG F+ D V+ M +P
Sbjct: 117 AIRVLQAEGALRRAVVVDLDVHQGNGTAAVFAGDDAVFTFSMHGENNFP 165
>gi|254725040|ref|ZP_05186823.1| acetoin utilization protein AcuC [Bacillus anthracis str. A1055]
Length = 388
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|209809743|ref|YP_002265282.1| hypothetical protein VSAL_II0998 [Aliivibrio salmonicida LFI1238]
gi|208011306|emb|CAQ81752.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 300
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY P Y S L + + H + K+ R+ Q + S D+ C EP D+ VH
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIQKYQRLYQAIQSLHSDDRLCYFEPTALPIRDIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+Y+ ++ + +P + FP + L++R + GT L A
Sbjct: 60 ETNYVDAVVNG-------TLPAAKMRRIGFPWSDFLIERTL-----TSTAGTCLTVDKAV 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G AI++ GG+HH D G GFC + D+ + H+A Q I V+I+D D H G+G
Sbjct: 108 EYGAAIHLSGGYHHAHYDFGSGFCLFNDLVVAAHHALKQECIETVLIVDSDVHHGDG 164
>gi|423489834|ref|ZP_17466516.1| hypothetical protein IEU_04457 [Bacillus cereus BtB2-4]
gi|402431125|gb|EJV63197.1| hypothetical protein IEU_04457 [Bacillus cereus BtB2-4]
Length = 397
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|114048034|ref|YP_738584.1| histone deacetylase superfamily protein [Shewanella sp. MR-7]
gi|113889476|gb|ABI43527.1| histone deacetylase superfamily [Shewanella sp. MR-7]
Length = 300
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVYHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q S + + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGSLSSTALRRIG----FPWSEALVERTL-----HSVSGTSLTAHLAMQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDG 164
>gi|328949949|ref|YP_004367284.1| histone deacetylase [Marinithermus hydrothermalis DSM 14884]
gi|328450273|gb|AEB11174.1| Histone deacetylase [Marinithermus hydrothermalis DSM 14884]
Length = 294
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYL-----KSLQSSPNV 108
HPF K+ + +E D+ I P L + H +YL + LQ +
Sbjct: 18 HPFPLYKYPGV-----AEALRDRLAIRTPPAVDWGTLALAHRPAYLMRLRQEGLQRQEEL 72
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
+ + P L++R R+ VGGT+ A + A G +N+ GG HH D
Sbjct: 73 RLGLRYTP------ALLERA-----RRSVGGTLAATQDALIHGLGLNLAGGTHHAYPDRA 121
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
G+ + D+++ + + Q RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 122 EGYSLFNDVAVAVRWLRAQGFRGRVLVVDLDAHQGNGTAVFFQDDPTVFTLSVHAANNYP 181
Query: 229 RDYE 232
R E
Sbjct: 182 RHKE 185
>gi|297567404|ref|YP_003686376.1| histone deacetylase [Meiothermus silvanus DSM 9946]
gi|296851853|gb|ADH64868.1| Histone deacetylase [Meiothermus silvanus DSM 9946]
Length = 299
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEA-SKEDLLVVHSESYLKSLQS---SPNVS 109
HPF K+G + + L E V P A E L + H +YL L+S S S
Sbjct: 19 HPFPRYKYGGVAEVLRGE------VQVRPAPALPWEALALAHEPNYLARLRSQGLSRQES 72
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ + +P + L+ R + GGT++A++ A ERG +N+ GG HH D
Sbjct: 73 LRVGLP----WSESLLTRAL-----HAAGGTLMASRDALERGLGMNLAGGTHHAYPDRAE 123
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
G+ + D+++ + + + +++DLDAHQGNG F +DS V+ L + YP
Sbjct: 124 GYSLFNDVAVALANLRAEGFGGKALVVDLDAHQGNGTAVFFQNDSYVFTLSLHGERNYP 182
>gi|399051324|ref|ZP_10741246.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. CF112]
gi|433542917|ref|ZP_20499335.1| acetoin utilization protein AcuC [Brevibacillus agri BAB-2500]
gi|398050901|gb|EJL43246.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. CF112]
gi|432185755|gb|ELK43238.1| acetoin utilization protein AcuC [Brevibacillus agri BAB-2500]
Length = 385
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + + +SS G L ++ ++ P A+ ++L +VH
Sbjct: 7 LIYSPDYTKYYFHDD--HPFNQRRLLLMHDLMSSYGLLTESDLLAPRMATDDELALVHDR 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + +S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIEFVREQGHSEAELPQAMSYGLGTEDVPCFRNMHESAALI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
E A N GG HH GFC Y D S+ I Y N +RVM ID DAH G+G
Sbjct: 119 QGEAAHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKHWN-ARVMYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 178 QWAFYDDPNVLTVSIHETGKY 198
>gi|326334871|ref|ZP_08201072.1| histone deacetylase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692908|gb|EGD34846.1| histone deacetylase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 299
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK-----SLQSSPNV 108
H F K+ + + L EG + K P + S +VHS Y+K +L +
Sbjct: 16 HRFPMEKYALLHEQLLWEGVVQKQDFFSPKKVSFASATLVHSPQYVKDFIGLTLDERTRI 75
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
I + LV R++ V GTI A A E G A N+ GG HH ++ G
Sbjct: 76 HIGF------IQSQQLVDRELTL-----VQGTIDGALYALEDGIAFNIAGGTHHAYSNRG 124
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y R++IIDLD HQGNG + FS V+ M G YP
Sbjct: 125 EGFCMLNDQAIAAAYLLQYRKAKRILIIDLDVHQGNGTAEIFSHTPEVFTFSMHAKGNYP 184
>gi|75760728|ref|ZP_00740751.1| Acetoin utilization acuC protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491783|gb|EAO54976.1| Acetoin utilization acuC protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 397
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDXLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|1075598|pir||B47050 glnA 3'-region hypothetical protein - Synechococcus sp
gi|580726|emb|CAA78367.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 310
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 13 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 69
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 70 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 120
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 121 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 180
Query: 212 SDSRVYILDM 221
D V+ M
Sbjct: 181 DDPTVFTFSM 190
>gi|423591354|ref|ZP_17567385.1| hypothetical protein IIG_00222 [Bacillus cereus VD048]
gi|401232722|gb|EJR39220.1| hypothetical protein IIG_00222 [Bacillus cereus VD048]
Length = 397
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQIISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVISGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|428319276|ref|YP_007117158.1| Histone deacetylase [Oscillatoria nigro-viridis PCC 7112]
gi|428242956|gb|AFZ08742.1| Histone deacetylase [Oscillatoria nigro-viridis PCC 7112]
Length = 305
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KLP+IY DY + H F +K+ + Q L ++G DK+ P +E + +
Sbjct: 1 MKLPIIYHEDY---VAPLPPNHRFPMAKFRMLYQMLLADGVADKSQFHAPELPPQEWIEL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
VH Y+ Q+ N ++ + QR++ P+ + V GT+L A
Sbjct: 58 VHDHCYV---QAYCNGTL-----------DNKAQRRIGLPWSRALANRTCTAVAGTVLTA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
KLA + G A N GG HH G GFC + D+++ + +V+I+DLD HQG+
Sbjct: 104 KLALDCGLACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKSGLVRKVLIVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDM 221
G F DS V+ M
Sbjct: 164 GTAVIFQDDSSVFTFSM 180
>gi|196032976|ref|ZP_03100389.1| acetoin utilization protein AcuC [Bacillus cereus W]
gi|195994405|gb|EDX58360.1| acetoin utilization protein AcuC [Bacillus cereus W]
Length = 388
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGNVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|410941483|ref|ZP_11373280.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
gi|410783432|gb|EKR72426.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
Length = 271
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITEKTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFIYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEHPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
D HQGNG+ F D V+ M +YP+
Sbjct: 130 DLHQGNGNSFVFQDDPDVFTFSMHQEDLYPK 160
>gi|315428106|dbj|BAJ49693.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
Length = 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-I 111
HP + + Q L SEG L VEP +A K+D+++ H+ +Y++ ++ V
Sbjct: 22 HPLNRVRLEAFYQKLDSEGKNLQGLLFVEPEKAGKDDVMLFHTPAYVEFVEERCRVGKGY 81
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTI--LAAKLAKERGWAINVGGGFHHCSADEGG 169
+E FP C + VG T+ L ++ E N GG HH D G
Sbjct: 82 LEYGDTPAFPGCFEAASYV------VGTTLKLLRMIISGEISAGFNPMGGLHHARRDRAG 135
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC + D + I Y + N+ V +D+DAH G+G DF S+ RV D+ G +Y
Sbjct: 136 GFCIFNDAGVAIEYLLRRENMRNVAYVDIDAHHGDGVCYDFYSEKRVIFADIHQDGRTLY 195
Query: 228 P 228
P
Sbjct: 196 P 196
>gi|297583577|ref|YP_003699357.1| histone deacetylase [Bacillus selenitireducens MLS10]
gi|297142034|gb|ADH98791.1| Histone deacetylase [Bacillus selenitireducens MLS10]
Length = 389
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP+ + + + HPF+ + L G LD++ IV EAS E+LL+VH E
Sbjct: 7 FIYSPE-QLKYR-FHQEHPFNQKRLSITKDLLIKLGALDEDRIVPAREASIEELLLVHDE 64
Query: 97 SYLKSL--------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++++ +SS + I F + L VGGT+ A
Sbjct: 65 DYIQAVLNASEGQVRSSYRTAFGIGTDDTPAFTDMHQAAAWL------VGGTLEAVDQVF 118
Query: 149 ERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
E+G A+N+GGG HH + GFC Y D S+ I Y + +RV+ +D DAH G+G
Sbjct: 119 EKGHKHALNLGGGLHHGFKGKASGFCIYNDSSIAIEYIRRKYG-ARVLYVDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F +DS V + G +
Sbjct: 178 QWAFYNDSDVCTFSVHESGRF 198
>gi|307105160|gb|EFN53410.1| hypothetical protein CHLNCDRAFT_25722 [Chlorella variabilis]
Length = 330
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL-VVH 94
P++Y P Y L H F + + I + L ++G +D + +P DLL + H
Sbjct: 24 PVVYHPLYSAPQLA--PGHRFPMAVFSTIHRLLLADGVVDPRQVHQPSALPGRDLLHLAH 81
Query: 95 SESYLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+ Y+ + S + + + F R ++ +V GTIL A+LA G A
Sbjct: 82 AAEYVDAFCGGSLDEQRVRRIG----FGEATRTRLLVDRTLAEVAGTILTAELALGHGLA 137
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N GG HH +D G GFC D+++ Q R++I+DLD HQG+G FS
Sbjct: 138 CNTAGGTHHAFSDYGSGFCILNDLAITAQLLLHQRRCQRILILDLDVHQGDGTAAIFSGR 197
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQY 249
V+ L + +P +A + +N+Y
Sbjct: 198 QDVFTLSVHAASNFPARKQASHLDIALPDGTADNEY 233
>gi|153000143|ref|YP_001365824.1| histone deacetylase superfamily protein [Shewanella baltica OS185]
gi|160874765|ref|YP_001554081.1| histone deacetylase superfamily protein [Shewanella baltica OS195]
gi|378708018|ref|YP_005272912.1| histone deacetylase superfamily protein [Shewanella baltica OS678]
gi|151364761|gb|ABS07761.1| histone deacetylase superfamily [Shewanella baltica OS185]
gi|160860287|gb|ABX48821.1| histone deacetylase superfamily [Shewanella baltica OS195]
gi|315267007|gb|ADT93860.1| histone deacetylase superfamily [Shewanella baltica OS678]
Length = 302
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDG 166
>gi|90580008|ref|ZP_01235816.1| histone deacetylase/AcuC/AphA family protein [Photobacterium
angustum S14]
gi|90438893|gb|EAS64076.1| histone deacetylase/AcuC/AphA family protein [Photobacterium
angustum S14]
Length = 302
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY Y S L + + H + +K+ + + + +K I +P A + +H
Sbjct: 2 LPLIYHSQY--SALTLPEKHRYPINKYRLLFEAIFHSELSNKVSIHQPNRADIAKIKAIH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+ L + +P + FP N L+ R +L GGT L LA
Sbjct: 60 DSEYVDDL-------LFNRLPAAKMRRIGFPWSNELINRTLL-----STGGTQLTVDLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC + D+++ +A +I +VMIID D H G+G
Sbjct: 108 EHGIAIHLSGGYHHAHHDFGSGFCLFNDLAIAAKHALSYSHIDKVMIIDCDVHHGDGTAT 167
Query: 209 DFSSDSRV 216
F+ + +
Sbjct: 168 LFADNPNI 175
>gi|359452419|ref|ZP_09241768.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
gi|358050552|dbj|GAA78017.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
Length = 302
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +VEP+ + L ++H
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFAHLYQHVEELGLIGDN-LVEPILGTPAPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKKLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|381203585|ref|ZP_09910691.1| histone deacetylase [Sphingobium yanoikuyae XLDN2-5]
Length = 300
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G +P+ AS + VH +Y++ + + + VPP
Sbjct: 24 KYGLVMDVLAESGAPMTVHAPDPMPASW--IAAVHDPAYVEEV-------LALAVPPEK- 73
Query: 120 FPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+R++ +P ++V GGT LAAKLA G+A N GG HH AD G G+
Sbjct: 74 ------ERRIGFPVTERVMRRALLSPGGTWLAAKLALVHGYAANAAGGSHHALADSGAGY 127
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C + D+++ + + +++R++I+DLD HQG+G + V+ L + +P
Sbjct: 128 CVFNDLAIAANRLIAEGDVNRILILDLDVHQGDGTASLMAGRGDVFTLSIHAEKNFP 184
>gi|414069842|ref|ZP_11405833.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
gi|410807805|gb|EKS13780.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
Length = 302
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +VEP+ + L ++H
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFAHLYQHVEELGLIGDN-LVEPILGTPAPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKKLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDG 167
>gi|156094402|ref|XP_001613238.1| histone deacetylase [Plasmodium vivax Sal-1]
gi|148802112|gb|EDL43511.1| histone deacetylase, putative [Plasmodium vivax]
Length = 369
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE--DLLVV 93
P ++ P Y S EK H F K+ +I L EG + + + S+ L +
Sbjct: 76 PYVFHPIYS-SVPMKEKYHRFKIKKYEKIFSRLIEEGIYNADYAIPSCNISETIISLCSI 134
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E++++ + S + +E + L PN LV R F ++ GTIL++ LA +
Sbjct: 135 HDEAFVEEIFSIVTRNEQVEKYELTLHPN-LVCR-----FLIEINGTILSSLLAMKHFMC 188
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 189 MHIGGGNHHSKRNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 248
Query: 214 SRVYILDMFNPGIYP 228
+ V + + +P
Sbjct: 249 ANVKTISLHCRDNFP 263
>gi|359789845|ref|ZP_09292775.1| hypothetical protein MAXJ12_10690 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254255|gb|EHK57283.1| hypothetical protein MAXJ12_10690 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 281
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K+ + + L + G + + +P A L + H +Y+ + I VPP
Sbjct: 2 GKYSALMEQLDARGLATPSNLHKPTPAEPGWLKLAHDATYIDQV-------IACAVPPK- 53
Query: 119 LFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
++R++ +P ++V GGTILAA+LA G A N GG HH D G G
Sbjct: 54 ------IEREIGFPIGERVSRRAQLAAGGTILAARLALANGIACNTAGGSHHARRDHGAG 107
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC + D+++ + + V+I+DLD HQG+G ++ R + M YP
Sbjct: 108 FCTFNDVAVAALVLIAEGLAANVLIVDLDVHQGDGTADILKNEPRAFTFSMHGERNYP 165
>gi|428207541|ref|YP_007091894.1| histone deacetylase [Chroococcidiopsis thermalis PCC 7203]
gi|428009462|gb|AFY88025.1| Histone deacetylase [Chroococcidiopsis thermalis PCC 7203]
Length = 305
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y PDY + + H F K+ + + L ++G P + + +VH
Sbjct: 3 LPLVYHPDYVVP---LPDTHRFPMPKFQLLYELLIADGVAYPEQFQIPERPPQAWIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y++ +L + I + P C+ VGGT+L AKLA E
Sbjct: 60 LPEYVQAYCTGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTVLTAKLALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEK 208
G A N GG HH G GFC + D+++ +LN+ R V+I+DLD HQG+G
Sbjct: 109 CGLACNTAGGTHHAFPSYGSGFCIFNDLAIATR-VLQELNLVRKVLIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDM 221
F +D V+ M
Sbjct: 168 IFQNDPSVFTFSM 180
>gi|374704111|ref|ZP_09710981.1| putative histone deacetylase family protein [Pseudomonas sp. S9]
Length = 305
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y PDY F H F K+ + L G + + P E L +
Sbjct: 1 MRLPLVYHPDYSPEF---PAEHRFPMEKFRLLHDHLIDSGVVSDEELHSPALCPNEILAL 57
Query: 93 VHSESYLKSLQSS--PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y++ S P+ P + L QR V + VGG+IL A+LA E
Sbjct: 58 AHCPDYIERYMSGELPHADQRRLGLP---WSAALAQRTV-----RAVGGSILTAELALEH 109
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 110 GLACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLAAGKVQRVLIFDCDVHQGDG 164
>gi|119774382|ref|YP_927122.1| histone deacetylase/AcuC/AphA family protein [Shewanella
amazonensis SB2B]
gi|119766882|gb|ABL99452.1| histone deacetylase/AcuC/AphA family protein [Shewanella
amazonensis SB2B]
Length = 305
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F +K+ + Q L G + V P + VH
Sbjct: 2 IPLVYHTSY--SKLVLPPKHQFPITKYAHLRQHLLEYGHALEAQFVSPDPVDATFIKGVH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + + SP + P + LV+R + +GG++L AKLA RG
Sbjct: 60 DSDYVDAFLNGTLSPQAIRRLGFP----LSHALVERTL-----HSLGGSLLTAKLAMSRG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH D G G+C + D+ L + + + SRVMI+D D HQG+G
Sbjct: 111 IALHLAGGYHHAHRDFGSGYCVFNDLVLAARHLIDEGHASRVMILDCDVHQGDG 164
>gi|336311111|ref|ZP_08566078.1| histone deacetylase/AcuC/AphA family protein [Shewanella sp. HN-41]
gi|335865327|gb|EGM70353.1| histone deacetylase/AcuC/AphA family protein [Shewanella sp. HN-41]
Length = 302
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P+ + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPSHHKFPTTKYANLRQYLFDNQLATPAQFHAPIAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ Y++ I +P +AL FP LV+R + V GT L A LA
Sbjct: 62 QKEYVEQF-------ITGTLPTMALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G ++++ GG+HH D G G+C + D+ + + V+I D D HQG+G
Sbjct: 110 EHGISLHLTGGYHHAHYDFGSGYCIFNDLIIAAQKVIAAKQLHSVLIFDCDVHQGDG 166
>gi|332878787|ref|ZP_08446502.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332683138|gb|EGJ56020.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 276
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS---LQSSPNVSIIIEVPP 116
K+ + Q L EG D P + S E L + H+ Y+ LQ S E P
Sbjct: 3 KYALLPQQLLHEGIADPADFRTPSKVSLETLCLAHTPDYVHKFVHLQLSHK-----EALP 57
Query: 117 VALFPNC-LVQRKVLYPFRKQVGGTILAAKLA-KERGWAINVGGGFHHCSADEGGGFCAY 174
+ N LV R++ V GTI AA A + N+ GG HH +D G GFC
Sbjct: 58 IGFVQNQQLVDRELTL-----VQGTIEAALWALRTAEVGFNIAGGTHHAFSDRGEGFCML 112
Query: 175 ADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
D ++ Y + +V+IIDLD HQGNG + F D RV+ M G YP
Sbjct: 113 NDQAVAAAYLLAHTAVRKVLIIDLDVHQGNGTAEIFRHDPRVFTFSMHAEGNYP 166
>gi|152977032|ref|YP_001376549.1| histone deacetylase superfamily protein [Bacillus cytotoxicus NVH
391-98]
gi|152025784|gb|ABS23554.1| histone deacetylase superfamily [Bacillus cytotoxicus NVH 391-98]
Length = 388
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GFL + ++ P A+ E++ ++H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLVKSGFLSPSQVIPPRMATDEEIALIHTEDYINAVKRAGEGHLEQS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FP+ +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPHMHEASALL------VGGTLTAVDAVMSGKATCALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAIKYLQQKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|307941483|ref|ZP_07656838.1| histone deacetylase superfamily protein [Roseibium sp. TrichSKD4]
gi|307775091|gb|EFO34297.1| histone deacetylase superfamily protein [Roseibium sp. TrichSKD4]
Length = 354
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P+++ P Y S + H F K+ + + +EG L + +P A + + +
Sbjct: 39 MSVPIVHHPAYCAS---LPANHRFPMDKFRAVAALIEAEGLLGEGRFYKPRAAPFDWVAL 95
Query: 93 VHSESYLKSLQSSPNVSIIIEVP-PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
H Y+ + S+ VP VA ++ + R GGT+L LA E G
Sbjct: 96 AHDPVYVDQVFST-------NVPKAVAREIGFDIRPDIAARARYATGGTVLTGYLALEHG 148
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH +G GFC + D+++ I ISR ++IDLD HQG+G F
Sbjct: 149 IACNTAGGSHHARWKQGAGFCVFNDVAVAIRVMQADGVISRALVIDLDVHQGDGTADIFR 208
Query: 212 SDSRVYILDMFNPGIYP 228
V M YP
Sbjct: 209 HCDSVVTFSMHARKNYP 225
>gi|423368691|ref|ZP_17346123.1| hypothetical protein IC3_03792 [Bacillus cereus VD142]
gi|401080217|gb|EJP88507.1| hypothetical protein IC3_03792 [Bacillus cereus VD142]
Length = 388
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGQLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVISGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|423670233|ref|ZP_17645262.1| hypothetical protein IKO_03930 [Bacillus cereus VDM034]
gi|423673560|ref|ZP_17648499.1| hypothetical protein IKS_01103 [Bacillus cereus VDM062]
gi|401297593|gb|EJS03202.1| hypothetical protein IKO_03930 [Bacillus cereus VDM034]
gi|401310425|gb|EJS15741.1| hypothetical protein IKS_01103 [Bacillus cereus VDM062]
Length = 397
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVISGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|402555203|ref|YP_006596474.1| acetoin utilization protein AcuC [Bacillus cereus FRI-35]
gi|401796413|gb|AFQ10272.1| acetoin utilization protein AcuC [Bacillus cereus FRI-35]
Length = 388
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLYGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|390944571|ref|YP_006408332.1| deacetylase [Belliella baltica DSM 15883]
gi|390417999|gb|AFL85577.1| deacetylase, histone deacetylase/acetoin utilization protein
[Belliella baltica DSM 15883]
Length = 301
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YSP Y L + + H F K+ + + L EG + EP + +L H
Sbjct: 3 LKIAYSPLYQ---LDLPEGHRFPMEKYELLPEQLLYEGTVTSANFFEPKDLDNRWVLNTH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y + L N+ + FP L+ R+ + G+I A+ A E G
Sbjct: 60 DFDYFEKLL---NLRLSKSEIRKTGFPLSKALIDRET-----HIMQGSIEASLFALEYGI 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH D G GFC DI++ +Y + +V++IDLD HQGNG + F +
Sbjct: 112 AMNIAGGTHHAFTDRGEGFCLLNDIAISANYLLENFLVKKVLVIDLDVHQGNGTAQIFEN 171
Query: 213 DSRVYILDMFNPGIYPRDYE 232
V+ M YP E
Sbjct: 172 KDEVFTFSMHGASNYPMHKE 191
>gi|402495659|ref|ZP_10842382.1| histone deacetylase [Aquimarina agarilytica ZC1]
Length = 300
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS 109
++K H F K+ + + L EG + EP ++ D+L VH+E Y +L++
Sbjct: 14 LKKGHRFPMEKYDLLPKQLLHEGTCTVDNFFEPKIVAETDVLRVHTEEYFFNLRA----- 68
Query: 110 IIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ +P + FP LV R+++ G+I A K A G A+N+ GG HH
Sbjct: 69 --LNLPKSEVRAIGFPLSETLVNRELII-----TQGSIDACKYAITNGIAMNIAGGTHHA 121
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
++ G FC D ++ Y +++I+DLD HQGNG + F +S+V+ M
Sbjct: 122 FSNRGEAFCLLNDQAVAAAYLLHHKLAKKILIVDLDVHQGNGTAEIFKHNSKVFTFSMHG 181
Query: 224 PGIYP 228
YP
Sbjct: 182 EKNYP 186
>gi|291296879|ref|YP_003508277.1| histone deacetylase superfamily protein [Meiothermus ruber DSM
1279]
gi|290471838|gb|ADD29257.1| histone deacetylase superfamily [Meiothermus ruber DSM 1279]
Length = 296
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEA-SKEDLLVVHSESYLKSLQS---SPNVS 109
HPF K+ + + L E LD ++P A + E L + H+ YL+ L+S S S
Sbjct: 18 HPFPKYKYAGVAEALRGE--LD----IQPAPAIAWETLALAHTPDYLQKLRSEGLSRQES 71
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ +P + L+ R + GGT+ A A + G +N+ GG HH
Sbjct: 72 HKVGLP----WSQSLLTRAL-----HAAGGTLAATLDALQTGLGLNLAGGTHHAYPGRAE 122
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
G+C + D+++ I Y Q RV+++DLDAHQGNG F +D V+ L + YP
Sbjct: 123 GYCLFNDVAVAIAYLRAQGWNGRVLVVDLDAHQGNGTAAFFRNDPTVFTLSVHAERNYP 181
>gi|427408837|ref|ZP_18899039.1| hypothetical protein HMPREF9718_01513 [Sphingobium yanoikuyae ATCC
51230]
gi|425713147|gb|EKU76161.1| hypothetical protein HMPREF9718_01513 [Sphingobium yanoikuyae ATCC
51230]
Length = 300
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G +P+ AS + VH +Y++ + + + VPP
Sbjct: 24 KYGLVMDVLADSGAPMTVHAPDPMPASW--IAAVHDPAYVEEV-------LTLAVPPDK- 73
Query: 120 FPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+R++ +P ++V GGT LAAKLA G+A N GG HH AD G G+
Sbjct: 74 ------ERRIGFPVTERVMRRALLSPGGTWLAAKLALVHGYAANAAGGSHHALADSGAGY 127
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C + D+++ + + +++R++I+DLD HQG+G + V+ + + +P
Sbjct: 128 CVFNDLAIAANRLIAEGDVNRILILDLDVHQGDGTASLMAGRGDVFTMSIHAEKNFP 184
>gi|113970809|ref|YP_734602.1| histone deacetylase superfamily protein [Shewanella sp. MR-4]
gi|113885493|gb|ABI39545.1| histone deacetylase superfamily [Shewanella sp. MR-4]
Length = 300
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVYHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q S + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGSLASTALRRIG----FPWSEALVERTL-----HSVSGTSLTAHLALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDG 164
>gi|395647111|ref|ZP_10434961.1| putative histone deacetylase family protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 306
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L S G + ++ P E L +
Sbjct: 1 MPLPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVSSGLTQDSHLLRPALCPPEILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|373949015|ref|ZP_09608976.1| histone deacetylase superfamily [Shewanella baltica OS183]
gi|386325146|ref|YP_006021263.1| histone deacetylase superfamily protein [Shewanella baltica BA175]
gi|333819291|gb|AEG11957.1| histone deacetylase superfamily [Shewanella baltica BA175]
gi|373885615|gb|EHQ14507.1| histone deacetylase superfamily [Shewanella baltica OS183]
Length = 302
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYTHLRQYLLDNQLATPAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAARNAIASQQVHKVLIFDCDVHQGDG 166
>gi|384044609|ref|YP_005492626.1| Histone deacetylase family protein, involved in acetoin utilization
[Bacillus megaterium WSH-002]
gi|345442300|gb|AEN87317.1| Histone deacetylase family protein, involved in acetoin utilization
[Bacillus megaterium WSH-002]
Length = 387
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|294501551|ref|YP_003565251.1| acetoin utilization protein AcuC [Bacillus megaterium QM B1551]
gi|294351488|gb|ADE71817.1| acetoin utilization protein AcuC [Bacillus megaterium QM B1551]
Length = 387
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|337280109|ref|YP_004619581.1| histone deacetylase [Ramlibacter tataouinensis TTB310]
gi|334731186|gb|AEG93562.1| Histone deacetylase-like protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 29/188 (15%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + L+ E L + + L AS +L + H+ Y++++
Sbjct: 17 HRFPMAKYQLLRDRLADE--LPGIRLAQALPASDGELALAHTPGYIQAISDG-------S 67
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
V P +QR++ +P+ R+ VG TI A + A + G A N+ GG HH A
Sbjct: 68 VDP-------RIQREIGFPWSPAMAERARRSVGATISACRAAFQDGVAANIAGGTHHAYA 120
Query: 166 DEGGGFCAYADISLC-----IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
D+GGGFC + D ++ + + RV I+DLD HQGNG + F D V+ L
Sbjct: 121 DKGGGFCVFNDAAVASRLMQAEWGRQRAKPLRVAIVDLDVHQGNGTARIFHGDPTVFTLS 180
Query: 221 MFNPGIYP 228
+ +P
Sbjct: 181 LHGQKNFP 188
>gi|295706899|ref|YP_003599974.1| acetoin utilization protein AcuC [Bacillus megaterium DSM 319]
gi|294804558|gb|ADF41624.1| acetoin utilization protein AcuC [Bacillus megaterium DSM 319]
Length = 387
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|170055055|ref|XP_001863409.1| histone deacetylase 19 [Culex quinquefasciatus]
gi|167875153|gb|EDS38536.1| histone deacetylase 19 [Culex quinquefasciatus]
Length = 402
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV----SIIIEVPPVALFP 121
+ ++S G LDK V P + S DLL+ HS Y+ L+ S V + E+ +
Sbjct: 63 ELIASYGLLDKCHTVNPPKCSSSDLLIFHSSDYVDFLKRSNQVDDLNEVTEELEEFGIAY 122
Query: 122 NC-LVQRKVLYPFRKQVGGTILAAKLAKERG--WAINVGGGFHHCSADEGGGFCAYADIS 178
+C L+ R +Y F QV G+ +AA A G +AIN GG+HH D+ GFC DI
Sbjct: 123 DCPLIDR--IYDFVTQVAGSSMAAVDAVLNGAKFAINWSGGWHHAQRDKASGFCYVNDIV 180
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD--MFNPGIYP 228
+ I + ++ +V+ IDLD H G+G E F S V + + G +P
Sbjct: 181 IGI--SKLRSKFQKVLYIDLDVHHGDGVENAFCSSKYVMTVSTHLHEAGYFP 230
>gi|47565084|ref|ZP_00236127.1| acetoin utilization protein AcuC [Bacillus cereus G9241]
gi|47557870|gb|EAL16195.1| acetoin utilization protein AcuC [Bacillus cereus G9241]
Length = 388
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D + + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNICPISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|302525553|ref|ZP_07277895.1| acetoin dehydrogenase [Streptomyces sp. AA4]
gi|302434448|gb|EFL06264.1| acetoin dehydrogenase [Streptomyces sp. AA4]
Length = 417
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS---- 109
HPF+ + + + G LD ++ P A E+LL VH+ YL +++ +PNV
Sbjct: 48 HPFNPVRLDLTVRLATELGVLDGVELLVPTAAGDEELLRVHAPEYLAAVREAPNVGWDVG 107
Query: 110 --IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-KLAK-ERGWAINVGGGFHHCSA 165
+ + PV FP ++ VG T+LAA K+A E A+N+ GG HH
Sbjct: 108 HGLGTDDNPV--FPGMHDATALV------VGSTLLAARKIADGEVRRAVNIAGGLHHAMR 159
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
D GFC Y D ++ I + + R+ +D D H G+G + F D RV + M
Sbjct: 160 DHASGFCIYNDCAIAISW-LLDHGFDRIAYVDTDVHHGDGVQAAFYDDPRVLTVSM 214
>gi|444426852|ref|ZP_21222255.1| hypothetical protein B878_12940 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239867|gb|ELU51421.1| hypothetical protein B878_12940 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 307
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L SE + K +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLGSEDWGGKIEFFQPTPLSTDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|377562735|ref|ZP_09792103.1| putative acetoin utilization protein [Gordonia sputi NBRC 100414]
gi|377530032|dbj|GAB37268.1| putative acetoin utilization protein [Gordonia sputi NBRC 100414]
Length = 414
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + EPL + L VVHS Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDVDVSEPLAIGDDALTVVHSRDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF + V + R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGAVRR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ IH+ ++ R+ ID+DAH G+G + F+SD RV + +
Sbjct: 138 RSRAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQVAFASDPRVMTVSL 193
>gi|418023646|ref|ZP_12662631.1| histone deacetylase superfamily [Shewanella baltica OS625]
gi|353537529|gb|EHC07086.1| histone deacetylase superfamily [Shewanella baltica OS625]
Length = 302
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PLIY Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLIYHASY--SKLALPPHHRFPTTKYANLRQYLLENLLATPAQFHTPTAMTVQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDG 166
>gi|217973889|ref|YP_002358640.1| histone deacetylase superfamily protein [Shewanella baltica OS223]
gi|217499024|gb|ACK47217.1| histone deacetylase superfamily [Shewanella baltica OS223]
Length = 302
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTVQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAKNAIASQQVHKVLIFDCDVHQGDG 166
>gi|333375921|ref|ZP_08467719.1| histone deacetylase [Kingella kingae ATCC 23330]
gi|332969379|gb|EGK08404.1| histone deacetylase [Kingella kingae ATCC 23330]
Length = 347
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSPD F G LHP + I + L + G +E E S L VH+
Sbjct: 40 IYSPDCQAHFAG--SLHPESPERTNAIARALKNSGLWILLQKIEAPEVSDIQLARVHTRR 97
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVG 157
YL SL+S + +++ +Q ++ K AK A+
Sbjct: 98 YLSSLESQVPQTGSVKINEDTFLSRDSLQAARKAAGAAVKAVDLVMTKQAKNAFCAVRPP 157
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH AD+ GFC +I++ +A + + RV I+D D H G+G E F D+RV
Sbjct: 158 G--HHAHADKASGFCFINNIAVAAMHAIAEYRLERVAILDFDLHHGDGTEDIFRDDNRVM 215
Query: 218 ILDMFNPGIYP 228
+L F +YP
Sbjct: 216 LLSTFEHPLYP 226
>gi|402823253|ref|ZP_10872687.1| histone deacetylase superfamily protein [Sphingomonas sp. LH128]
gi|402263213|gb|EJU13142.1| histone deacetylase superfamily protein [Sphingomonas sp. LH128]
Length = 303
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + E+ F K+ + + L G + P +E L VH
Sbjct: 2 LHVVHHPGYAVE---TERTGTFPHDKYALVMRLLGESGV--PMTVHAPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ + I VP QR++ + +++ GGT LAAKL
Sbjct: 57 DPVYVAQV-------IGCAVPTAK-------QRRIGFAIDERISRRSQLSPGGTWLAAKL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G+A N GG HH AD G G+C + D++L + + ++SR++I+DLD HQG+G
Sbjct: 103 ALKHGYAANSAGGSHHALADTGAGYCVFNDLALAANRLIEEGDVSRILILDLDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
+ S ++ L + +P +AR +D
Sbjct: 163 AALTAGRSDIFTLSIHAEKNFP-TRKARSSLD 193
>gi|406707601|ref|YP_006757953.1| histone deacetylase family protein [alpha proteobacterium HIMB59]
gi|406653377|gb|AFS48776.1| histone deacetylase family protein [alpha proteobacterium HIMB59]
Length = 298
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ + Y PDYDI + H F SK+ + L S+ F K + +P A E L H
Sbjct: 1 MHIFYHPDYDIP---VPSTHRFVGSKFSDLYNHLQSQSFASKLKVGQPTPAPMERLTRAH 57
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S +I +P + L R L + GT L A+ A + G
Sbjct: 58 FSLYIEKVSQDELSKEDLRLINLP----WSERLRNRSFL-----AIEGTYLTARQALKSG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A +VGGG HH + G GFC + D+ + ++ +V+I+DLD HQG+G
Sbjct: 109 VACHVGGGTHHAHHNHGLGFCVFNDLGYTAKNLIAEGHVEKVLILDLDVHQGDGTIDICQ 168
Query: 212 SDSRVYILDMFNPGIYP 228
D R++ + + +P
Sbjct: 169 GDPRIFTCSIHSESNFP 185
>gi|372222676|ref|ZP_09501097.1| histone deacetylase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 300
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + + EP+ A + +L VH+ Y L + ++
Sbjct: 18 HRFPMEKYELLPQQLLHEGTCEASNFFEPIYAEIQPILAVHTTDYYSRL-----TKLNLD 72
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ RK+ +P KQ+ GT+ A + A + G A+N+ GG HH +
Sbjct: 73 KKEI---------RKIGFPLSKQLVDREHIITDGTLKAIQFALKYGIAMNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y Q S+++I+DLD HQGNG + F + V+ +
Sbjct: 124 NRGEAFCLLNDQAIGAQYLLDQNLASKILIVDLDVHQGNGTAEIFEHNPHVFTFSIHGKA 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|436836803|ref|YP_007322019.1| Histone deacetylase [Fibrella aestuarina BUZ 2]
gi|384068216|emb|CCH01426.1| Histone deacetylase [Fibrella aestuarina BUZ 2]
Length = 305
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L +G + P +L VH+ Y+ +L++ + ++
Sbjct: 23 HRFPMIKYELIHEQLLYDGTCTEANFFAPSPVDDRWVLGVHTAGYVDALKTQTVDARMVR 82
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ P + + V+ GT+ A A+ G A+NV GG HH D G GFC
Sbjct: 83 RIGFPMSPRLIEREWVI------TQGTLDATHHARRDGVAMNVAGGTHHAYPDHGEGFCL 136
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
D+ + HY ++++IDLD HQGNG F + RV+ M YP
Sbjct: 137 LNDVGVAAHYLLETGQARQILVIDLDVHQGNGTAVMFQGEPRVFTFSMHGKDNYP 191
>gi|327405255|ref|YP_004346093.1| Histone deacetylase [Fluviicola taffensis DSM 16823]
gi|327320763|gb|AEA45255.1| Histone deacetylase [Fluviicola taffensis DSM 16823]
Length = 302
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y P Y + H F K+G I + L EG L++ +EP + VH++ Y
Sbjct: 7 YHPSY---IHAVPSTHRFPMEKYGLIYEQLLYEGILEEAHFLEPNLLDLKIASKVHTKEY 63
Query: 99 LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGG 158
L L N++ V+ F + Q+ + FR + GT L A+ + G A+N+ G
Sbjct: 64 LTKL---VNLNCTSREQRVSGFVHN--QQLIEREFRI-MEGTRLCAERVENGGIALNIAG 117
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI 218
G HH + G GFC D ++ + + R++I+DLD HQGNG + F ++ V+
Sbjct: 118 GTHHAYTNRGEGFCLLNDQAIAAQWLLDEQLFKRILIVDLDVHQGNGTAEIFKNNPNVFT 177
Query: 219 LDMFNPGIYPRDYE 232
M YP E
Sbjct: 178 FSMHGKANYPMHKE 191
>gi|443476226|ref|ZP_21066143.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
gi|443018851|gb|ELS33037.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
Length = 305
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P+Y I + F K+ + + L ++G P E + +VH
Sbjct: 3 LPIIYHPNY---VAPIANTNRFPMEKFRLLYEMLLTDGVAQPEQFFRPELPDLEAIALVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + + P I +P ++ Y R VGGT+L A+ A +G
Sbjct: 60 DREYVDAYWNGNLEPKAQRRIGLP---------WSPELAYRTRIAVGGTLLTARFALRQG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + + +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLLKEGLVKKILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDM 221
++ +V+ M
Sbjct: 171 NEPQVFTFSM 180
>gi|315427026|dbj|BAJ48643.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
gi|343485694|dbj|BAJ51348.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
Length = 317
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-I 111
HP + + Q L SEG L VEP +A K+D+++ H+ +Y++ ++ V
Sbjct: 22 HPLNRVRLEAFYQKLDSEGKNLQGLLFVEPEKAGKDDVMLFHTPAYVEFVEERCRVGKGY 81
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTI--LAAKLAKERGWAINVGGGFHHCSADEGG 169
++ FP C + VG T+ L ++ E N GG HH D G
Sbjct: 82 LDYGDTPAFPGCFEAASYV------VGTTLKLLRMIISGEISAGFNPMGGLHHARRDRAG 135
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC + D + I Y + N+ V +D+DAH G+G DF S+ RV D+ G +Y
Sbjct: 136 GFCIFNDAGVAIEYLLRRENMRNVAYVDIDAHHGDGVCYDFYSEKRVIFADIHQDGRTLY 195
Query: 228 P 228
P
Sbjct: 196 P 196
>gi|443311907|ref|ZP_21041529.1| deacetylase, histone deacetylase/acetoin utilization protein
[Synechocystis sp. PCC 7509]
gi|442777982|gb|ELR88253.1| deacetylase, histone deacetylase/acetoin utilization protein
[Synechocystis sp. PCC 7509]
Length = 305
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY + + H F K+ ++ + L + G P ++ L +VH
Sbjct: 3 LPLIYHCDY---VAALPEQHRFPMPKFRQLYELLIATGVAHPQQFFLPEIPCQQWLELVH 59
Query: 95 SESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ LQ + + I +P + LV+R VGGTIL A+LA + G
Sbjct: 60 TSEYVQAYLQGTLDAKAQRRIGLP----WSPALVKRTC-----TAVGGTILTAQLALKYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDF 210
A N GG HH G G+C + D+++ +LN++R ++IIDLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGYCIFNDLAIASR-VIQRLNLARKILIIDLDVHQGDGTAFIF 169
Query: 211 SSDSRVYILDM 221
+D V+ M
Sbjct: 170 QNDDSVFTFSM 180
>gi|409405465|ref|ZP_11253927.1| deacetylase [Herbaspirillum sp. GW103]
gi|386434014|gb|EIJ46839.1| deacetylase [Herbaspirillum sp. GW103]
Length = 282
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A + A G A+N+ GG HH AD G GFC + D
Sbjct: 53 QREIGFPWSPQMVERSRRSSGATIAACRAAFSEGLAVNLAGGTHHAYADHGAGFCVFNDA 112
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
++ + +RV I+DLD HQGNG + D V+ L + YP + E
Sbjct: 113 AIAARLMQAERRAARVAIVDLDVHQGNGTASILARDESVFTLSLHGQNNYPFEKE 167
>gi|449134933|ref|ZP_21770397.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
europaea 6C]
gi|448886412|gb|EMB16819.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
europaea 6C]
Length = 305
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y+ +D L + H F +K+ + Q + + ++ P A+ E LL H
Sbjct: 1 MRLYYTDHFD---LPLPDGHRFPMTKYRLLRQRIVESDHHRDDALIVPQAATDEQLLHCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y++ +QS E+ + FP K++ R+ G TI AA+ A E G +
Sbjct: 58 TPDYVQRVQSGTLTKQ--EIRRIG-FP---WSEKMVERSRRSTGATISAARAALEEGVSA 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 112 NLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRATIIDLDVHQGNG 162
>gi|398873689|ref|ZP_10628942.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM74]
gi|398198844|gb|EJM85796.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM74]
Length = 325
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
RIL S + + I LPLIY DY F H F K+ + L G
Sbjct: 8 GRILLS--FLNEIIMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDTD 62
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRK 135
++ P E L + H SY++ S S + +P + L +R V +
Sbjct: 63 LLRPDLCPAEILALAHDPSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----R 113
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
VGG++LAA+ A E G A ++ GG HH D GFC + D+++ HY ++RV+I
Sbjct: 114 AVGGSLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLI 173
Query: 196 IDLDAHQGNG 205
D D HQG+G
Sbjct: 174 FDCDVHQGDG 183
>gi|388598754|ref|ZP_10157150.1| hypothetical protein VcamD_02518 [Vibrio campbellii DS40M4]
Length = 307
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L++E + ++ +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLANESWGEQVEFFQPTSLSVDEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|170746500|ref|YP_001752760.1| histone deacetylase superfamily protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653022|gb|ACB22077.1| histone deacetylase superfamily [Methylobacterium radiotolerans JCM
2831]
Length = 306
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+ + P Y+ + H F K+G + + L ++G L V P AS + LL H
Sbjct: 4 PIAFHPAYEAP---LPSGHRFPMRKYGLLAETLVAKG-LAPLGFVTPEPASADILLRAHD 59
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
+Y+ ++ + +V IE LV+R R VGGT+LA +LA G A +
Sbjct: 60 PAYVDAVLAC-DVGREIERAIGLPVDAALVRRS-----RASVGGTLLAGRLALAEGLAGS 113
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
GG HH +G GFC D+++ + + RV+++DLD HQG+G +
Sbjct: 114 AAGGSHHARRQQGAGFCVLNDVAVAARTLQAEGLVRRVLVVDLDVHQGDGTADCLALSPD 173
Query: 216 VYILDMFNPGIYP 228
++ L + YP
Sbjct: 174 LFTLSIHCENNYP 186
>gi|381401553|ref|ZP_09926451.1| histone deacetylase superfamily protein [Kingella kingae PYKK081]
gi|380833407|gb|EIC13277.1| histone deacetylase superfamily protein [Kingella kingae PYKK081]
Length = 380
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSPD F G LHP + I L + G +E E S L VH+
Sbjct: 73 IYSPDCQAHFAG--SLHPESPERTNVIAHALKNSGLWILLQKIEAPEVSDIQLARVHTRR 130
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVG 157
YL SL+S + +++ +Q ++ K AK A+
Sbjct: 131 YLSSLESQVPQTGSVKINEDTFLSRDSLQAARKAAGAAVKAVDLVMTKQAKNAFCAVRPP 190
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH AD+ GFC +I++ +A + + RV I+D D H G+G E F D+RV
Sbjct: 191 G--HHAHADKASGFCFINNIAVAAMHAIAEYRLERVAILDFDLHHGDGTEDIFRDDNRVM 248
Query: 218 ILDMFNPGIYP 228
+L F +YP
Sbjct: 249 LLSTFEHPLYP 259
>gi|82705211|ref|XP_726876.1| histone deacetylase [Plasmodium yoelii yoelii 17XNL]
gi|23482464|gb|EAA18441.1| histone deacetylase/AcuC/AphA family protein, putative [Plasmodium
yoelii yoelii]
Length = 461
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 36 PLIYSPDYDISFLGIEK------LHPFDSSKWGRICQFLSS--EGFLDKNCIVEPLEASK 87
P ++ P Y + + K H F +K+ I +L+ E + N I+ + SK
Sbjct: 146 PYVFHPIYSNAERKVNKSNRHIQTHRFKINKYENIFNYLNKREECIYENNYIIPSCDISK 205
Query: 88 --EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
+ L +HS +++ + + + I++ + LF + L+ R ++ ++ GTIL++
Sbjct: 206 IKKSLFSIHSTNFINKMFNIIKNNEEIKLYELNLFSD-LIARYLI-----EINGTILSSL 259
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA + +++GGG HH D+G GFC + DI++ + + + V+I+D+D HQG+G
Sbjct: 260 LALKHSMCMHIGGGNHHSKRDKGDGFCIFNDIAIAVDFLLFYKIVKNVIILDVDVHQGDG 319
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
+ F + V + + YP
Sbjct: 320 TAEIFQNHQNVKTISLHCKNNYP 342
>gi|399063313|ref|ZP_10746847.1| deacetylase, histone deacetylase/acetoin utilization protein
[Novosphingobium sp. AP12]
gi|398032393|gb|EJL25735.1| deacetylase, histone deacetylase/acetoin utilization protein
[Novosphingobium sp. AP12]
Length = 303
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + E+ F K+ + + L G + P +E L VH
Sbjct: 2 LHVVHHPGYVVE---TERGGTFPHDKYALVMRVLDESGV--AMTVHSPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ + S +VS + + + +R L P GGT LAAKLA + G+A
Sbjct: 57 EPAYVDEVISC-SVSAAKQRRIGFVIDERISRRSQLSP-----GGTWLAAKLALQYGYAA 110
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GG HH AD G G+C + D++L + + ++SR++I+DLD HQG+G + S
Sbjct: 111 NSAGGSHHALADSGAGYCVFNDLALAANRLIDEGDVSRILILDLDVHQGDGTAALTAGRS 170
Query: 215 RVYILDMFNPGIYPRDYEARRFID 238
++ L + +P +AR +D
Sbjct: 171 DIFTLSIHAEKNFPT-RKARSSLD 193
>gi|89073475|ref|ZP_01159998.1| histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
SKA34]
gi|89050739|gb|EAR56220.1| histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
SKA34]
Length = 302
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY Y S L + + H + +K+ + + + K I +P+ + + +H
Sbjct: 2 LPLIYHSQY--SALTLPEKHRYPINKYRLLFEAVFHSELRKKVSIHQPIRSDIAKIKAIH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ L + +P + R++ +P+ Q+ GGT L L
Sbjct: 60 DSEYVDDL-------LFNRLPAAKM-------RRIGFPWSDQLITRTLLSTGGTQLTVDL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AI++ GG+HH D G GFC + D+++ +A +I +VMIID D H G+G
Sbjct: 106 ALEHGIAIHLSGGYHHAHHDFGSGFCLFNDLAIAAKHALSYSHIDKVMIIDCDVHHGDGT 165
Query: 207 EKDFSSDSRV 216
++D +
Sbjct: 166 ATLLANDPNI 175
>gi|407275572|ref|ZP_11104042.1| acetoin utilization protein [Rhodococcus sp. P14]
Length = 423
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY G HP + ++ G L+ + P A+ DLL +H+
Sbjct: 20 VVWSPDYLDYRWGPS--HPMNPTRLDLTMALSRGLGLLEGVETLRPPAATDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCL-VQRKVLYPFRKQV-----GGTILAAK--LAK 148
+Y+++++ + N+ P A P+ L + ++P + GGT+ AA+ A
Sbjct: 78 AYVEAVKHAGNLPPGSTAGPEA--PHGLGTEDNPIFPRMHEASAVLAGGTLAAAREIAAG 135
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G+G +
Sbjct: 136 RTRRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDNGFDRIAYLDVDAHHGDGVQH 194
Query: 209 DFSSDSRVYIL 219
F D RV +
Sbjct: 195 AFLGDPRVLTV 205
>gi|218438511|ref|YP_002376840.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7424]
gi|218171239|gb|ACK69972.1| histone deacetylase superfamily [Cyanothece sp. PCC 7424]
Length = 304
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + H F K+ + L ++G P ++E + +
Sbjct: 1 MSLPIVYHRDYVTP---LPDGHRFPMPKFKLLYDLLITDGITTPESTHTPEVPTQEIIQL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+ Y+ + S P I +P + LV R +GGTIL AKLA +
Sbjct: 58 VHTPDYVGAYCSGTLDPKAQRRIGLP----WSPGLVTRTC-----TALGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 109 QGIACNTAGGTHHAFPSYGSGFCIFNDLAIATRTLQHLGLVKKVLIVDLDVHQGDGTAYI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F +D V+ M +P
Sbjct: 169 FQNDESVFTFSMHCEANFP 187
>gi|218295840|ref|ZP_03496620.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
gi|218243578|gb|EED10106.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
Length = 293
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSI 110
HPF K+ + + L +G + I+ E +E L + H SYL+ L S S+
Sbjct: 17 HPFPLYKYRGVAEAL--KGLV---PILPAPEVPREALFLAHEASYLEKLFREGLSRQESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT++AA+ A G +N+ GG HH D G
Sbjct: 72 RLGLP----FGPGLLKRAL-----HAAGGTLMAAEDALRTGLGLNLAGGTHHAFPDRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ + D+++ + + + RV+++DLDAHQGNG F D VY L + YP
Sbjct: 123 YSLFNDVAVAVRWLRARGFWGRVLVVDLDAHQGNGTAFFFRDDPTVYTLSLHGERNYP 180
>gi|67925050|ref|ZP_00518430.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
gi|67853097|gb|EAM48476.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
Length = 305
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y Y + + H F K+ + + L E +D N I P L +
Sbjct: 1 MNLPIVYDHQYVVP---LPNGHRFPMGKFSLLYELLLKEKIIDFNDIYTPKLPENSLLEL 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ + I +P + LV+R + VGGTIL AKLA +
Sbjct: 58 VHCPDYITGYCQGTLTDKAQRRIGLP----WSEALVKRTCI-----AVGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLN-ISRVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ QL + +V+IIDLD HQG+G
Sbjct: 109 FGLACNTAGGTHHAFPNYGSGFCIFNDLAIATCV---LQQLKLVQKVLIIDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYE 232
K F +D V+ M +PR+ +
Sbjct: 166 AKIFENDETVFTFSMHCESNFPREKQ 191
>gi|398815069|ref|ZP_10573742.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. BC25]
gi|398035396|gb|EJL28640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. BC25]
Length = 385
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + +SS G L + I+ P A+ E+L +VH
Sbjct: 7 LIYSPDYTQYYFHDD--HPFNQRRLLLTHDLMSSYGILKDSDILTPRPATDEELALVHDP 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIQFVRDQGHSEHELPQAASYGLGTEDVPCFSNMHEASSLI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N GG HH GFC Y D S+ I Y N +RV+ ID DAH G+G
Sbjct: 119 SGQAEHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKNWN-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 178 QWAFYDDPHVLTVSIHETGKY 198
>gi|387790625|ref|YP_006255690.1| deacetylase [Solitalea canadensis DSM 3403]
gi|379653458|gb|AFD06514.1| deacetylase, histone deacetylase/acetoin utilization protein
[Solitalea canadensis DSM 3403]
Length = 299
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
H F K+ I + L EG + + P +E +L+ H Y LK+L SP
Sbjct: 17 HRFPMIKYELIPEQLLHEGTITHENLFSPAFVPEEIILLTHKHEYWNKLKTLTLSPQE-- 74
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHH 162
+R+ +P +Q+ GTI A G A+NV GG HH
Sbjct: 75 ---------------ERRTGFPLSQQLIDREITIAQGTIDCCYYALNDGVALNVAGGTHH 119
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D+G GFC DI++ +Y + S+++++DLD HQGNG + F + V+ M
Sbjct: 120 AFTDKGEGFCLLNDIAIAANYLLKKKIASKILVVDLDVHQGNGTAEIFQDNKAVFTFSMH 179
Query: 223 NPGIYPRDYE 232
+P E
Sbjct: 180 GKTNWPYKKE 189
>gi|433777117|ref|YP_007307584.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
gi|433669132|gb|AGB48208.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
Length = 300
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI--VEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + L + G + EP AS L +
Sbjct: 3 LQIVHHPDYDAGF---ATSHRFPMSKYPLLMEALRARGLAGAGALNTAEPAPASW--LKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQV--GGTILAA 144
H+ Y++ + + VP ++R++ +P R Q+ GGT+ AA
Sbjct: 58 AHATDYVEQV-------LGCSVPEK-------IEREIGFPVGPRVSLRAQLAAGGTVAAA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA G A N GG HH +G GFC + D+++ + ++++DLD HQG+
Sbjct: 104 RLALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVASLVLLEEGAAHSILVVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRF 236
G + R + M R+Y AR+
Sbjct: 164 GTADILGDEPRAFTFSMHG----ERNYPARKI 191
>gi|441508325|ref|ZP_20990249.1| putative acetoin utilization protein [Gordonia aichiensis NBRC
108223]
gi|441447353|dbj|GAC48210.1| putative acetoin utilization protein [Gordonia aichiensis NBRC
108223]
Length = 414
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + PL+ + L VVHS+ Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDIDVSPPLDIGDDALTVVHSQDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF + V + R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGAVRR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ IH+ ++ R+ ID+DAH G+G + F+SD RV + +
Sbjct: 138 RSRAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQVAFASDPRVMTVSL 193
>gi|94310146|ref|YP_583356.1| histone deacetylase superfamily [Cupriavidus metallidurans CH34]
gi|93353998|gb|ABF08087.1| histone deacetylase superfamily [Cupriavidus metallidurans CH34]
Length = 323
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A ++A E+G A N+ GG HH AD+G GFC + D
Sbjct: 89 QREIGFPWSHEMVERSRRSAGATIAACRVALEQGIAANLAGGTHHAYADKGAGFCVFNDA 148
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
++ ++ RV +IDLD HQGNG D ++ L + YP EA
Sbjct: 149 AIAARRLQRDGSVRRVAVIDLDVHQGNGTASILRDDPTIFTLSLHGEKNYPFRKEA 204
>gi|342306691|dbj|BAK54780.1| protein deacetylase [Sulfolobus tokodaii str. 7]
Length = 350
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF S + + L G + IV P S+E L ++H++ Y++ ++ S S ++
Sbjct: 21 HPFKSLREAMTKKLLEERGAFHEIDIVPPKVISEELLSLIHTKEYIEFIKRKSEEGSGLL 80
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ F + +V GT+ A +L + IN+GGGFHH + GFC
Sbjct: 81 DEGDTPAFKGIFEAALI------RVSGTVTAVELLQSYDHTINIGGGFHHAKRSQASGFC 134
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI--LDMFNPGIYP 228
+ D++L I A + + ++ ++D+D H G+G + D +V L MF+P +P
Sbjct: 135 VFNDVALAIKLA--ERSFKKIALVDIDGHHGDGTQYLLYDDPKVLKVSLHMFHPRFFP 190
>gi|443318867|ref|ZP_21048109.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 6406]
gi|442781505|gb|ELR91603.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 6406]
Length = 278
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 126 QRKVLYPFR--------KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ P+ VGGTIL AKLA G A N GG HH D G GFC + D+
Sbjct: 55 QRRIGLPWSPNLVRRTCTAVGGTILTAKLALNYGLACNTAGGTHHAFPDHGAGFCIFNDL 114
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
++ Q + R++I+DLD HQG+G F D RV M +PR
Sbjct: 115 AIAARILLDQNLVQRILIVDLDVHQGDGTAWIFRDDPRVVTFSMHCAVNFPR 166
>gi|32477270|ref|NP_870264.1| histone deacetylase [Rhodopirellula baltica SH 1]
gi|417302473|ref|ZP_12089573.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica WH47]
gi|32447821|emb|CAD77339.1| conserved hypothetical protein-putative histone deacetylase
[Rhodopirellula baltica SH 1]
gi|327541213|gb|EGF27757.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica WH47]
Length = 305
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ-FLSSEGFLDKNCIVEPLEASKEDLLVV 93
+ L Y+ +D L + + H F SK+ + Q + SE D IV P A+ E LL
Sbjct: 1 MRLYYTDHFD---LPLPEGHRFPMSKYRLLRQRVVESEHHRDDTLIV-PQAATDEQLLHC 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ Y++ +QS E+ + FP K++ R+ G TI AA+ A + G +
Sbjct: 57 HTPDYVQRVQSGTLTKQ--EIRRIG-FP---WSAKMVERSRRSTGATISAARAALDEGIS 110
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 111 ANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRAAIIDLDVHQGNG 162
>gi|156975305|ref|YP_001446212.1| hypothetical protein VIBHAR_03035 [Vibrio harveyi ATCC BAA-1116]
gi|156526899|gb|ABU71985.1| hypothetical protein VIBHAR_03035 [Vibrio harveyi ATCC BAA-1116]
Length = 307
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L++E + ++ +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLANESWGEQVEFFQPTSLSVDEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVAGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|229592755|ref|YP_002874874.1| putative histone deacetylase family protein [Pseudomonas
fluorescens SBW25]
gi|229364621|emb|CAY52526.1| putative histone deacetylase family protein [Pseudomonas
fluorescens SBW25]
Length = 306
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + + ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTEDSQLLRPQLCPAQILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DTGYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|254559298|ref|YP_003066393.1| histone deacetylase [Methylobacterium extorquens DM4]
gi|254266576|emb|CAX22340.1| Histone deacetylase family protein [Methylobacterium extorquens
DM4]
Length = 297
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRD 230
+ + ++ L + YP D
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD 187
>gi|194289418|ref|YP_002005325.1| histone deacetylase [Cupriavidus taiwanensis LMG 19424]
gi|193223253|emb|CAQ69258.1| Histone deacetylase [Cupriavidus taiwanensis LMG 19424]
Length = 314
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+ E A + LL+ H+ Y+++ + + QR++ +P+
Sbjct: 40 LSEAPRAGDDALLLAHTAEYVEAASAGT--------------LDAARQREIGFPWSEAMV 85
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ +
Sbjct: 86 ERSRRSAGATIEACRSALREGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAV 145
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
RV +IDLD HQGNG D V+ L + YP EA
Sbjct: 146 RRVAVIDLDVHQGNGTASILHGDPSVFTLSLHGEKNYPFRKEA 188
>gi|15922638|ref|NP_378307.1| acetoin utilization protein AcuC [Sulfolobus tokodaii str. 7]
Length = 362
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF S + + L G + IV P S+E L ++H++ Y++ ++ S S ++
Sbjct: 33 HPFKSLREAMTKKLLEERGAFHEIDIVPPKVISEELLSLIHTKEYIEFIKRKSEEGSGLL 92
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ F + +V GT+ A +L + IN+GGGFHH + GFC
Sbjct: 93 DEGDTPAFKGIFEAALI------RVSGTVTAVELLQSYDHTINIGGGFHHAKRSQASGFC 146
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI--LDMFNPGIYP 228
+ D++L I A + + ++ ++D+D H G+G + D +V L MF+P +P
Sbjct: 147 VFNDVALAIKLA--ERSFKKIALVDIDGHHGDGTQYLLYDDPKVLKVSLHMFHPRFFP 202
>gi|427718250|ref|YP_007066244.1| histone deacetylase [Calothrix sp. PCC 7507]
gi|427350686|gb|AFY33410.1| Histone deacetylase [Calothrix sp. PCC 7507]
Length = 310
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y PDY + H F SK+ ++ + L +G P + + +VH
Sbjct: 9 LPIVYHPDY---IAPLPPGHRFPMSKFRQLYELLLGDGVAQIAQFHTPERPPTDLIELVH 65
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ +L + I + P C+ VGGTIL AKLA
Sbjct: 66 TPDYVQAYCEGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTILTAKLALS 114
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 115 QGLACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKIGLVHKILIVDLDVHQGDGTAFI 174
Query: 210 FSSDSRVYILDM 221
F D V+ M
Sbjct: 175 FQDDESVFTFSM 186
>gi|111023769|ref|YP_706741.1| acetoin dehydrogenase [Rhodococcus jostii RHA1]
gi|397737303|ref|ZP_10503975.1| acetoin utilization protein acuC [Rhodococcus sp. JVH1]
gi|110823299|gb|ABG98583.1| possible acetoin dehydrogenase [Rhodococcus jostii RHA1]
gi|396926742|gb|EJI93979.1| acetoin utilization protein acuC [Rhodococcus sp. JVH1]
Length = 423
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPAAASDADLLRIHTP 77
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 78 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 131
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 132 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 190
Query: 205 GHEKDFSSDSRVYILDMFN 223
G + F+ D RV + +
Sbjct: 191 GVQHAFAHDPRVLTISLHQ 209
>gi|421610754|ref|ZP_16051920.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SH28]
gi|408498538|gb|EKK03031.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SH28]
Length = 305
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ-FLSSEGFLDKNCIVEPLEASKEDLLVV 93
+ L Y+ +D L + + H F SK+ + Q + SE D IV P A+ E LL
Sbjct: 1 MRLYYTDHFD---LPLPEGHRFPMSKYRLLRQRVVESEHHRDDTLIV-PQAATDEQLLHC 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ Y++ +QS E+ + FP K++ R+ G TI AA+ A + G +
Sbjct: 57 HTPDYVQRVQSGTLTKQ--EIRRIG-FP---WSAKMVERSRRSTGATISAARAAIDEGIS 110
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 111 ANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRAAIIDLDVHQGNG 162
>gi|331697762|ref|YP_004334001.1| histone deacetylase [Pseudonocardia dioxanivorans CB1190]
gi|326952451|gb|AEA26148.1| Histone deacetylase [Pseudonocardia dioxanivorans CB1190]
Length = 388
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G LD ++EP A+ E+L VH+ SYL +++S+P E
Sbjct: 22 HPLNPVRLDLTMRLARGLGVLDDVELLEPDPATDEELERVHAPSYLTAVRSAP------E 75
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ----VGGTILAAK-LAKERGWAINVGGGFHHCSADEG 168
+P + + + GG++LAA+ +A A+N+ GG HH D
Sbjct: 76 MPFGVGHGLGTADNPIFFGMHESSALIAGGSLLAARQIAAGADRAVNIAGGLHHAMRDRA 135
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I + Q R+ +D+D H G+G + F D RV + M
Sbjct: 136 AGFCVYNDCAVAIAWLLDQ-GYERIAYVDVDVHHGDGVQAAFYDDPRVLTVSM 187
>gi|326800435|ref|YP_004318254.1| histone deacetylase [Sphingobacterium sp. 21]
gi|326551199|gb|ADZ79584.1| Histone deacetylase [Sphingobacterium sp. 21]
Length = 300
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + N P E + + + H +Y + L++ + I
Sbjct: 18 HRFPMLKYELIPEQLVYEGTVLPNAFFRPHEVDEHYITLAHQITYWEKLKNLNLSTKEIR 77
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+L LV R++ V GTI A + G A N+ GG HH ++ G GFC
Sbjct: 78 RTGFSL-SKLLVYREI-----SIVQGTIECCDHALQDGIAFNIAGGTHHAGSNWGEGFCL 131
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
D ++ HY Q +++IIDLD HQGNG F S+ RV+ M
Sbjct: 132 LNDQAIGAHYLLSQKKAKKILIIDLDVHQGNGTADIFKSEQRVFTFSM 179
>gi|240137289|ref|YP_002961758.1| histone deacetylase family protein [Methylobacterium extorquens
AM1]
gi|240007255|gb|ACS38481.1| Histone deacetylase family protein [Methylobacterium extorquens
AM1]
Length = 297
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRD 230
+ + ++ L + YP D
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD 187
>gi|157962481|ref|YP_001502515.1| histone deacetylase superfamily protein [Shewanella pealeana ATCC
700345]
gi|157847481|gb|ABV87980.1| histone deacetylase superfamily [Shewanella pealeana ATCC 700345]
Length = 304
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PLIY Y S L + LH F SK+ + ++L +G ++ + P +AS E L +H
Sbjct: 2 VPLIYDASY--SKLALPPLHRFPISKYRALYEYLLEQGIAEQPQFIAPTKASIEYLTALH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+SY+K S S ++ FP LV+R LY V GT L + A G
Sbjct: 60 DQSYVKDFISGELDSKLMRRIG---FPWSKALVER-TLYS----VAGTALTCEQAITHGC 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
AI++ GG+HH G G+C + D+ L + +I V+I D D HQG+G
Sbjct: 112 AIHLSGGYHHAHQQFGSGYCIFNDLVLAAVNSQQIDDIETVLIFDCDVHQGDG 164
>gi|383768053|ref|YP_005447036.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
gi|381388323|dbj|BAM05139.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
Length = 315
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP---NVSI 110
H F K+G + L++ G L + P A+ E L H +Y + S +
Sbjct: 8 HRFPMPKFGHLHDHLAAVGLLGPGNLHRPEPAAVETLGRAHDPAYADAFLSGRLDRDALR 67
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P + L R V +GGT+LAA+LA G A N+ GG HH G G
Sbjct: 68 TLGLP----WSAGLAARTV-----TALGGTVLAARLALRHGLAANLAGGTHHAHRGHGAG 118
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC + D+++ + + +V+I+DLD HQG+G + + R + L + YP
Sbjct: 119 FCIFNDLAVAALTLLEEDAVDQVLIVDLDVHQGDGTARILRHEPRAFTLSVHCASNYP 176
>gi|163942397|ref|YP_001647281.1| histone deacetylase superfamily protein [Bacillus
weihenstephanensis KBAB4]
gi|163864594|gb|ABY45653.1| histone deacetylase superfamily [Bacillus weihenstephanensis KBAB4]
Length = 388
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ VH+ Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAYVHTAEYINAVKLAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVISGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY 227
G Y
Sbjct: 193 TGRY 196
>gi|387895767|ref|YP_006326064.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
gi|387163772|gb|AFJ58971.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
Length = 306
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + + ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPPLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|407688433|ref|YP_006803606.1| histone deacetylase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291813|gb|AFT96125.1| histone deacetylase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 300
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + + H F K+ I L + G ++ + V P L +
Sbjct: 4 PLVFHPIY--SQLDLPERHRFPIEKYVGIRDELLNRG-VEASRFVTPSPVDLSFLTAYYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
Y+ +L + AL + R++ +P+ +Q V GT L AKLA
Sbjct: 61 PDYVDALSTG------------ALDKKAM--RRIGFPWSQQLIERTRTAVAGTCLTAKLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E G A+N+ GG+HH AD G GFC + D+ L ++ V+I+DLD HQG+G
Sbjct: 107 LEHGKALNLTGGYHHAFADFGSGFCLFNDLYLAAKTMQQTPSVENVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYP 228
K +D ++ L + +P
Sbjct: 167 KLAENDRDIFTLSIHGEKNFP 187
>gi|163761313|ref|ZP_02168388.1| hypothetical protein HPDFL43_21684 [Hoeflea phototrophica DFL-43]
gi|162281470|gb|EDQ31766.1| hypothetical protein HPDFL43_21684 [Hoeflea phototrophica DFL-43]
Length = 271
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP-PVALFPNCL 124
+ ++ G + P+ AS E L + HS SY+ + +S VP P+
Sbjct: 2 ELIAESGLSARASFHMPVPASAEWLALAHSRSYVDQVIAS-------RVPAPIEREIGFA 54
Query: 125 VQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184
V +V R GT++AA+LA G A N GG HH D+G GFC + D+++
Sbjct: 55 VDERVSLRARLATAGTVMAARLALSEGIACNTAGGSHHARRDQGAGFCTFNDVAVASLVL 114
Query: 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
++++DLD HQG+G + +++ V + + YP
Sbjct: 115 LADGEARNILVVDLDVHQGDGTAEICGANAAVRTVSVHGEKNYP 158
>gi|350531992|ref|ZP_08910933.1| hypothetical protein VrotD_12733 [Vibrio rotiferianus DAT722]
Length = 317
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L+ +G+ ++ +P S +D+
Sbjct: 2 LPLIYHPIY--SQLELAEGHRYPIMKYHYLYQAVVEKLAIKGWGEQIEFFQPNPLSVDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHS Y+ L + +P V + FP L+ R + GT+L A
Sbjct: 60 KRVHSGEYVDLLVTG-------SMPAVKMRRIGFPWSEALIARTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
++A E G AI++ GG+HH D G GFC + D+++ + +I +VMIID D H G+
Sbjct: 108 EMALEHGVAIHLSGGYHHAHKDFGSGFCLFNDLAIAATHMLDHDHIDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|260219472|emb|CBA26317.1| Uncharacterized protein SYNPCC7002_A1628 [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 317
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-LQSSPNVSIII 112
H F +K+ + ++ E L + E A++ +L +VH+ +Y+ S LQ + +++
Sbjct: 17 HRFPMAKYRMLRDRIADE--LPSIQLTEAPAATEGELALVHTPAYIDSILQGTAEPAVLR 74
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
E+ FP + +R + + VG T+ AA++A G A N+ GG HH A +GGG
Sbjct: 75 EIG----FPWSPAMAERAL-----RSVGATVAAARVAMIEGLAANLAGGTHHAYAHKGGG 125
Query: 171 FCAYADISLCIHYAFVQLNISR-----------VMIIDLDAHQGNGHEKDFSSDSRVYIL 219
FC + D+++ + SR V +IDLD HQGNG F D V+ L
Sbjct: 126 FCVFNDLAVAARVLQAEWGRSRHPDGSRRQPLQVAVIDLDVHQGNGTASIFRHDESVFTL 185
Query: 220 DMFNPGIYP 228
+ +P
Sbjct: 186 SLHGDKNFP 194
>gi|423519352|ref|ZP_17495833.1| hypothetical protein IG7_04422 [Bacillus cereus HuA2-4]
gi|401159709|gb|EJQ67092.1| hypothetical protein IG7_04422 [Bacillus cereus HuA2-4]
Length = 397
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ VH+ Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVIAPRMATDEEIAYVHTAEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVISGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|226313749|ref|YP_002773643.1| acetoin utilization protein AcuC [Brevibacillus brevis NBRC 100599]
gi|226096697|dbj|BAH45139.1| acetoin utilization protein AcuC [Brevibacillus brevis NBRC 100599]
Length = 385
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + +SS G L I+ P A+ E+L +VH
Sbjct: 7 LIYSPDYTQYYFHDD--HPFNQRRLLLTHDLMSSYGILKDADILAPRPATDEELALVHDP 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIQFVRDQGHSEHELPQAASYGLGTEDVPCFSNMHEASSLI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N GG HH GFC Y D S+ I Y N +RV+ ID DAH G+G
Sbjct: 119 SGQAKHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKNWN-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 178 QWAFYDDPHVLTVSIHETGKY 198
>gi|410621570|ref|ZP_11332416.1| histone deacetylase family protein [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410158808|dbj|GAC27790.1| histone deacetylase family protein [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 298
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 25/201 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L++ P Y S L + H F K+ I L E + ++C EP+ + + ++
Sbjct: 4 LVFHPIY--SQLDLPIRHRFPIQKYQGIKDALLLEN-VSRDCFYEPIPLNINAISRIYDP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAK 148
Y++ L S E+ P A+ R++ +P+ KQ+ GT+L + LA
Sbjct: 61 LYIEQLCSG-------ELDPKAM-------RRIGFPWSKQLIERTLTAAAGTVLTSSLAL 106
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH A+ G GFC D+ L NI +V++ D D HQG+G K
Sbjct: 107 EHGKALNLTGGYHHAFANFGSGFCMVNDLYLAALNMLQSKNIDKVLVFDCDVHQGDGTAK 166
Query: 209 DFSSDSRVYILDMFNPGIYPR 229
++++ VY + + +P
Sbjct: 167 LAANNNAVYTVSIHGEKNFPH 187
>gi|359426187|ref|ZP_09217274.1| putative acetoin utilization protein [Gordonia amarae NBRC 15530]
gi|358238664|dbj|GAB06856.1| putative acetoin utilization protein [Gordonia amarae NBRC 15530]
Length = 377
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP----------PVAL 119
S G LD +V P A LL H+ YL +++ +P+ S+ EVP PV
Sbjct: 15 SLGLLDHLDLVAPDPADDGLLLRAHTADYLAAVKQAPDPSV--EVPGGYGLGGEDNPV-- 70
Query: 120 FPNCLVQRKVLYPFRKQVGGTILAAKL--AKERGWAINVGGGFHHCSADEGGGFCAYADI 177
F + V+ VGGT+ AA+ E A+++GGG HH + GFC Y D+
Sbjct: 71 FEHMHEAASVI------VGGTLRAARAIATGEATRAVSIGGGMHHAMPESAAGFCLYNDV 124
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
++ I + +I RV ID+D H G+G ++ F+ D RV +
Sbjct: 125 AVAISWLLDNTDIQRVAYIDVDVHHGDGVQRAFADDPRVLTI 166
>gi|372210259|ref|ZP_09498061.1| histone deacetylase [Flavobacteriaceae bacterium S85]
Length = 300
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y+ ++K H F K+ I + L EG D +PL+A+ DL+ H
Sbjct: 2 LKIAYHPCYEHP---LKKGHRFPMEKYDLIPKQLMYEGTCDFENFFKPLKANFCDLIEAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+E+Y+ L N+ + E + FP +V R+++ GTI + A E G
Sbjct: 59 TEAYVNRLL---NLQLTKEEIRQSGFPLSKQIVDRELII-----TQGTIDCSYYALEYGI 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+NV GG HH ++ FC D ++ Y +V+I+DLD HQGNG + F +
Sbjct: 111 AMNVAGGTHHAYSNRPDPFCYLNDQAVGATYLLKNRLAKKVLIVDLDVHQGNGTAEIFRN 170
Query: 213 DSRVYILDMFNPGIYPRDYE 232
V+ M YP + E
Sbjct: 171 TPEVFTFSMHGKHNYPFEKE 190
>gi|386288827|ref|ZP_10065967.1| deacetylase [gamma proteobacterium BDW918]
gi|385278382|gb|EIF42354.1| deacetylase [gamma proteobacterium BDW918]
Length = 320
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LPL+ +P Y F H F K+ + L G + P E L +
Sbjct: 17 QLPLVSNPLYSYPF---ASGHRFPMQKFSLLFNHLREIGIATQANTYRPGRVRGEVLALA 73
Query: 94 HSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y+ + + SP+ + + +P + L QR ++ P GT L A+LA +
Sbjct: 74 HCPQYIHAFCNNTLSPSANRRMGLP----WSESLRQRSLISP-----NGTFLTAQLALKY 124
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D GFC + D+++ Q + R++I D D HQG+G +
Sbjct: 125 GMACHLAGGTHHAHYDFASGFCIFNDLAVTARTLLAQKKVQRILIFDCDVHQGDGTARIL 184
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVNNQ 248
SD+ V+ + +P +AR +D V +Q
Sbjct: 185 QSDTAVFTCSVHCEKNFPVR-KARSDLDINVAAGCGDQ 221
>gi|163850153|ref|YP_001638196.1| histone deacetylase superfamily protein [Methylobacterium
extorquens PA1]
gi|163661758|gb|ABY29125.1| histone deacetylase superfamily [Methylobacterium extorquens PA1]
Length = 308
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 13 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAELLRARGLV-PDGFVTPEPADAALLSGAH 68
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 69 DPVYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 114
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 115 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 174
Query: 207 EKDFSSDSRVYILDMFNPGIYPRD 230
+ + ++ L + YP D
Sbjct: 175 ADCLAREPDLFTLSIHCERNYPHD 198
>gi|410619155|ref|ZP_11330068.1| histone deacetylase family protein [Glaciecola polaris LMG 21857]
gi|410161283|dbj|GAC34206.1| histone deacetylase family protein [Glaciecola polaris LMG 21857]
Length = 299
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+PL++ P Y S L + H F K+ I L G + + +P S L
Sbjct: 1 MSIPLVFHPIY--SQLDLPHRHRFPIEKYQAIYDRLIDSG-IPSSQFHQPQALSPTQLAR 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
V+S Y+ +L ++E + R++ +P+ Q V GT+L +
Sbjct: 58 VYSPEYVNALTQG-----VLESKAM---------RRIGFPWSAQLIERSLTAVAGTVLTS 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A+N+ GG+HH A+ G GFC + D+ L NI +V+I D D HQG+
Sbjct: 104 SLAIEHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNMLQTPNIDKVLIFDCDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP 228
G K +++ +V+ + + +P
Sbjct: 164 GTAKLAANNPKVFTVSIHGEKNFP 187
>gi|423547955|ref|ZP_17524313.1| hypothetical protein IGO_04390 [Bacillus cereus HuB5-5]
gi|401178392|gb|EJQ85572.1| hypothetical protein IGO_04390 [Bacillus cereus HuB5-5]
Length = 397
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYIHAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +F N +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFSNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPSVCTISLHE 201
Query: 224 PGIY 227
G Y
Sbjct: 202 TGRY 205
>gi|386001547|ref|YP_005919846.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
gi|357209603|gb|AET64223.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
Length = 374
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSL-QSSPNVSII 111
HP + + + G +D+ ++ P A++E+L +VH+ YL+++ + +P+++
Sbjct: 19 HPLSPIRVSLAHKLIEDSGLIDERTRVLRPEPATEEELSLVHTLEYLEAVREEAPDLAFG 78
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWAINVGGGFHHCSADEGGG 170
+ +FP + GG+I AAK + +E A N+ GG HH + G
Sbjct: 79 LGSDDTPVFPGIFEASCSM------AGGSIEAAKKILEEDCAAFNLAGGLHHAFPTQAAG 132
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
FC + D +L I + ++ SRV+ ID+DAH G+G ++ F D V + G Y
Sbjct: 133 FCVFNDAALAI--SVLKRRFSRVLYIDIDAHHGDGVQQIFYEDPEVLTFSIHESGKY 187
>gi|452995875|emb|CCQ92264.1| protein deacetylase [Clostridium ultunense Esp]
Length = 378
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS-III 112
HPF+ + + G +D++ I P A+ E+L ++H Y+++++ + +S +
Sbjct: 22 HPFNQKRLELTLSLIRELGLIDESQIQSPRMATDEELTLIHEPYYIEAVKKAGEMSGSFL 81
Query: 113 EVP------PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCS 164
+P V +FP + VGG ++AA E+ A+++GGG HH
Sbjct: 82 GLPYGLGTEDVPIFPGMHEASAL------SVGGALVAADYVMEKPGRHALHLGGGLHHAF 135
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
GFC Y D S+ I Y + +RV+ +D DAH G+G + F DS V L
Sbjct: 136 RGRASGFCVYNDCSVAIAYVREKYR-ARVLYVDTDAHHGDGVQWAFYQDSDVMTLSFHET 194
Query: 225 GIY 227
G Y
Sbjct: 195 GKY 197
>gi|452960743|gb|EME66058.1| acetoin utilization protein [Rhodococcus ruber BKS 20-38]
Length = 423
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPD+ G HP + ++ G L+ + P A+ DLL +H+
Sbjct: 20 VVWSPDFLDYRWG--PTHPMNPTRLDLTMALSRGLGLLEGVETLRPPAATDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCL-VQRKVLYPFRKQV-----GGTILAAK--LAK 148
+Y+++++ + N+ P A P+ L + ++P + GGT+ AA+ A
Sbjct: 78 AYVEAVKHAGNLPPGSSAGPEA--PHGLGTEDNPIFPRMHEASAVLAGGTLAAAREIAAG 135
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G+G +
Sbjct: 136 RTRRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDNGFDRIAYLDVDAHHGDGVQH 194
Query: 209 DFSSDSRVYILDM 221
F D RV + +
Sbjct: 195 AFLGDPRVLTVSI 207
>gi|440740501|ref|ZP_20919983.1| putative histone deacetylase family protein [Pseudomonas
fluorescens BRIP34879]
gi|447918449|ref|YP_007399017.1| putative histone deacetylase family protein [Pseudomonas poae
RE*1-1-14]
gi|440376317|gb|ELQ12992.1| putative histone deacetylase family protein [Pseudomonas
fluorescens BRIP34879]
gi|445202312|gb|AGE27521.1| putative histone deacetylase family protein [Pseudomonas poae
RE*1-1-14]
Length = 306
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L S G + + ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVSTGLTEDSRLLRPELCPPQILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIARYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|373857484|ref|ZP_09600225.1| Histone deacetylase [Bacillus sp. 1NLA3E]
gi|372452616|gb|EHP26086.1| Histone deacetylase [Bacillus sp. 1NLA3E]
Length = 390
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ---------- 103
HPF+ + + G +++ +V P AS E+LL++H +Y+ +++
Sbjct: 21 HPFNQIRLKVTLDLIEKLGAINEKDMVPPRMASDEELLLIHDPNYVNAVKLAGIEKLSES 80
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
+ N I E P+ FPN L VGGT+ A + + A+N+GGG H
Sbjct: 81 MAENYGIGTEDTPI--FPNMHEASAFL------VGGTLTAVDYVMTGQAKHALNLGGGLH 132
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + N ++V+ +D DAH G+G + F D V L +
Sbjct: 133 HGFRGKASGFCIYNDCAVAIKYIQEKYN-AKVLYVDTDAHHGDGVQWSFYDDPNVCTLSI 191
Query: 222 FNPGIY 227
G Y
Sbjct: 192 HETGRY 197
>gi|291233233|ref|XP_002736558.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 315
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 25/185 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV--VHSESYLKSLQSSPNVSII 111
H F K+ R+ Q L + + + ++ P++ASK DLL VH++ Y++ +
Sbjct: 35 HRFQMRKFERLYQILLEQNVICERQVLMPVKASK-DLLTEAVHTKDYIEDFFNG------ 87
Query: 112 IEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ + QRK + + R + GGT+L A+ A + G A + GG HH
Sbjct: 88 --------WTDEKAQRKTGFVWSEGLVSRCRYETGGTVLTAEAALQCGLACSTAGGTHHA 139
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
G G+C + DI++ Y ++ +SRV++IDLD HQG+G F D V+ +
Sbjct: 140 FPAYGAGYCLFNDIAVAAKYLILRNKVSRVLVIDLDVHQGDGTAFIFKDDPAVFTFSVHC 199
Query: 224 PGIYP 228
+P
Sbjct: 200 GKNFP 204
>gi|429506272|ref|YP_007187456.1| hypothetical protein B938_13880 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487862|gb|AFZ91786.1| hypothetical protein B938_13880 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 388
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRTAAKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQASHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|428309234|ref|YP_007120211.1| deacetylase [Microcoleus sp. PCC 7113]
gi|428250846|gb|AFZ16805.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microcoleus sp. PCC 7113]
Length = 305
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F K+G++ + L + + P E + +VH
Sbjct: 3 LPIIYHPDY---VAPLPEGHRFPMPKFGKLYERLLNSHIATLDQFHTPEIPPTEWIELVH 59
Query: 95 SESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ L+ + + I +P + + LV+R VGGT+L A+LA + G
Sbjct: 60 TSDYVQAYLKGTLDTKAQRRIGLP----WSSALVKRTC-----TAVGGTLLTAQLALKYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ Q +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIAARVLQQQGLAQKILILDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDM 221
D V+ M
Sbjct: 171 DDPTVFTFSM 180
>gi|226366205|ref|YP_002783988.1| acetoin utilization protein [Rhodococcus opacus B4]
gi|226244695|dbj|BAH55043.1| putative acetoin utilization protein [Rhodococcus opacus B4]
Length = 423
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGTLEGVELLRPAAASDADLLRIHTP 77
Query: 97 SYLKSLQ----SSPNVSIIIEVP--------PVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+Y+++++ S+ + + E P PV FP +L GG++ AA
Sbjct: 78 AYVEAVKQAGHSTTSGVLGAEAPHGLGTEDNPV--FPQMHEASAIL------AGGSLAAA 129
Query: 145 K--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ A A+++GGG HH D GFC Y D+++ + + + R+ ID+DAH
Sbjct: 130 QEIAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAVSW-LLDNGFDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDMFN 223
G+G + F+ D RV + +
Sbjct: 189 GDGVQHAFAHDPRVLTISLHQ 209
>gi|441502098|ref|ZP_20984109.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
AK15]
gi|441429845|gb|ELR67296.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
AK15]
Length = 311
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 27/182 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV---EPLEASKEDLL 91
LPL+Y P Y S L + + H + +K+ + +L+ E + I +P+ +L
Sbjct: 2 LPLVYHPIY--SQLDLPEGHRYPITKYRLLYDYLNCELNITNRAITAFHQPIPIEAHELK 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILA 143
+H Y+++L ++ +P + R++ +P+ +Q+ GT L
Sbjct: 60 SLHCPDYIEALVNN-------SLPAAKM-------RRIGFPWSQQLIDRTLMSAAGTRLT 105
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
LA E G I++ GG+HH D G GFC D++ +A I +VMIID D HQG
Sbjct: 106 VDLAFEHGIGIHLSGGYHHAHHDFGSGFCLINDLAFAARHALTLDGIEKVMIIDCDVHQG 165
Query: 204 NG 205
+G
Sbjct: 166 DG 167
>gi|384100774|ref|ZP_10001831.1| acetoin dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965925|ref|ZP_14481860.1| acetoin dehydrogenase [Rhodococcus opacus M213]
gi|432340393|ref|ZP_19589835.1| acetoin dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|383841680|gb|EID80957.1| acetoin dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414568599|gb|EKT79357.1| acetoin dehydrogenase [Rhodococcus opacus M213]
gi|430774586|gb|ELB90172.1| acetoin dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 423
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPDAASDADLLRIHTP 77
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 78 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 131
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 132 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 190
Query: 205 GHEKDFSSDSRVYILDMFN 223
G + F+ D RV + +
Sbjct: 191 GVQHAFAHDPRVLTISLHQ 209
>gi|377559225|ref|ZP_09788785.1| putative acetoin utilization protein [Gordonia otitidis NBRC
100426]
gi|377523683|dbj|GAB33950.1| putative acetoin utilization protein [Gordonia otitidis NBRC
100426]
Length = 414
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + PL+ + L VVHS+ Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDVDVSPPLDIGDDALTVVHSQDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF + V + R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGAVRR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ IH+ ++ R+ ID+DAH G+G + F++D RV + +
Sbjct: 138 RARAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQVAFAADPRVMTVSL 193
>gi|109897487|ref|YP_660742.1| histone deacetylase superfamily protein [Pseudoalteromonas
atlantica T6c]
gi|109699768|gb|ABG39688.1| histone deacetylase superfamily [Pseudoalteromonas atlantica T6c]
Length = 306
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L G + + +P + L
Sbjct: 6 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDKLIGLG-VPQGQFHQPHALTPSQLN 62
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
V+S Y+ L L P + R++ +P+ +Q VGGT+L
Sbjct: 63 RVYSPDYVNDLTRG------------MLDPKAM--RRIGFPWSEQLIARSLTAVGGTVLT 108
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ LA E G A+N+ GG+HH A+ G GFC + D+ L I +V+I D D HQG
Sbjct: 109 SSLALEHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNVLQTPTIRKVLIFDCDVHQG 168
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPR 229
+G K S++ RV+ + + + +P
Sbjct: 169 DGTAKLASNNKRVFTVSIHSEKNFPH 194
>gi|153833853|ref|ZP_01986520.1| histone deacetylase/AcuC/AphA family protein [Vibrio harveyi HY01]
gi|148869795|gb|EDL68769.1| histone deacetylase/AcuC/AphA family protein [Vibrio harveyi HY01]
Length = 307
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L SE + K +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVVEKLGSEDWGGKIEFFQPTPLSTDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH E Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHCEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|77461139|ref|YP_350646.1| histone deacetylase superfamily protein [Pseudomonas fluorescens
Pf0-1]
gi|77385142|gb|ABA76655.1| putative histone deacetylase family protein [Pseudomonas
fluorescens Pf0-1]
Length = 306
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDEDLLRPELCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|416241930|ref|ZP_11633064.1| histone deacetylase family protein [Moraxella catarrhalis BC7]
gi|326571491|gb|EGE21506.1| histone deacetylase family protein [Moraxella catarrhalis BC7]
Length = 301
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|296112749|ref|YP_003626687.1| histone deacetylase [Moraxella catarrhalis RH4]
gi|295920443|gb|ADG60794.1| histone deacetylase family protein [Moraxella catarrhalis BBH18]
Length = 301
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|407700796|ref|YP_006825583.1| histone deacetylase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249943|gb|AFT79128.1| histone deacetylase family protein [Alteromonas macleodii str.
'Black Sea 11']
Length = 273
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L AKLA E G A+N+ GG+HH AD G GFC + D+
Sbjct: 51 RRIGFPWSEQLIERTRTAVAGTCLTAKLALEHGKALNLTGGYHHAFADFGSGFCLFNDLY 110
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
L +I V+I+DLD HQG+G K +D ++ L + +P
Sbjct: 111 LAAKTMLQTPSIENVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFP 160
>gi|138896351|ref|YP_001126804.1| acetoin utilization protein AcuC [Geobacillus thermodenitrificans
NG80-2]
gi|196249977|ref|ZP_03148672.1| histone deacetylase superfamily [Geobacillus sp. G11MC16]
gi|134267864|gb|ABO68059.1| Acetoin utilization protein AcuC [Geobacillus thermodenitrificans
NG80-2]
gi|196210491|gb|EDY05255.1| histone deacetylase superfamily [Geobacillus sp. G11MC16]
Length = 389
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + L + G LD +V P A+ E+L ++H +Y+++++++
Sbjct: 22 HPFNQLRVKLTYDLLRTIGALDDRHVVPPRMATDEELTLIHDRAYIEAVKAAGRGELSET 81
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A L+ + A+N+GGG H
Sbjct: 82 AAANYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDYVLSGQADHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIQYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|398910038|ref|ZP_10654851.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM49]
gi|398186870|gb|EJM74230.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM49]
Length = 325
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L + G ++ P + L
Sbjct: 19 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVNSGLTRDADLLRPELCPADILA 75
Query: 92 VVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ H SY++ S S + +P + L +R V + VGG++LAA+ A
Sbjct: 76 LAHDPSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQAL 126
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 127 EHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 183
>gi|452856621|ref|YP_007498304.1| protein deacetylase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080881|emb|CCP22648.1| protein deacetylase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 388
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRTATKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|395797814|ref|ZP_10477102.1| histone deacetylase family protein [Pseudomonas sp. Ag1]
gi|395338182|gb|EJF70035.1| histone deacetylase family protein [Pseudomonas sp. Ag1]
Length = 306
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|392544970|ref|ZP_10292107.1| histone deacetylase [Pseudoalteromonas rubra ATCC 29570]
Length = 307
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + + G + N + +P S E L VH
Sbjct: 12 LPLVYHPNYSFSF---DPNHRFVMSKFANLYQQVRAMGLIGDN-VYQPELGSPEPLETVH 67
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
++YL L Q I +P + L+ R P GT+ A+LA + G
Sbjct: 68 CDTYLWDLWRNQLDAKSMRRIGLP----WSEQLMARTFTAPL-----GTLKTAELALQTG 118
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D G G+C D+ Q ++ V+I DLD HQG+G
Sbjct: 119 VACHLAGGTHHAHYDFGSGYCMVNDLVFTSTTLIAQGKVNNVLIFDLDVHQGDG 172
>gi|229490824|ref|ZP_04384659.1| acetoin dehydrogenase [Rhodococcus erythropolis SK121]
gi|453070912|ref|ZP_21974139.1| acetoin utilization protein [Rhodococcus qingshengii BKS 20-40]
gi|229322214|gb|EEN88000.1| acetoin dehydrogenase [Rhodococcus erythropolis SK121]
gi|452759995|gb|EME18338.1| acetoin utilization protein [Rhodococcus qingshengii BKS 20-40]
Length = 423
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SP+Y +S+ HP + ++ S G L+ +EP AS DLL +H+
Sbjct: 20 VVWSPEY-LSYR-WSADHPMNPTRLDLTMALSRSLGLLEGIEFLEPSAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVS------------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+YL +++ + N + + E PV FP+ +L GG++ AA
Sbjct: 78 AYLAAVKDAGNSANNGVSGQDVPHGLGTEDNPV--FPHMHEASAIL------AGGSLAAA 129
Query: 145 K-LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ +A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH
Sbjct: 130 QEIASGRTRRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGYDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDM 221
G+G + F D RV + +
Sbjct: 189 GDGVQHAFLGDPRVLTVSL 207
>gi|421779567|ref|ZP_16216059.1| histone deacetylase [Moraxella catarrhalis RH4]
gi|407813277|gb|EKF84059.1| histone deacetylase [Moraxella catarrhalis RH4]
Length = 301
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|226185406|dbj|BAH33510.1| putative acetoin utilization protein [Rhodococcus erythropolis PR4]
Length = 423
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SP+Y +S+ HP + ++ S G L+ +EP AS DLL +H+
Sbjct: 20 VVWSPEY-LSYR-WSADHPMNPTRLDLTMALSRSLGLLEGIEFLEPSAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVS------------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+YL +++ + N + + E PV FP+ +L GG++ AA
Sbjct: 78 AYLAAVKDAGNSANNGVSGQDVPHGLGTEDNPV--FPHMHEASAIL------AGGSLAAA 129
Query: 145 K-LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ +A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH
Sbjct: 130 QEIASGRTRRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGYDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDM 221
G+G + F D RV + +
Sbjct: 189 GDGVQHAFLGDPRVLTVSL 207
>gi|395499064|ref|ZP_10430643.1| histone deacetylase family protein [Pseudomonas sp. PAMC 25886]
Length = 306
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|428213576|ref|YP_007086720.1| deacetylase [Oscillatoria acuminata PCC 6304]
gi|428001957|gb|AFY82800.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoria acuminata PCC 6304]
Length = 305
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y PDY + H F K+ + + L + + P ++ + VH
Sbjct: 3 LPIVYHPDY---VAPLPPSHRFPMEKFRLLYEMLLGDRVVTPEQCHTPELPPQDWIESVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y+++ P I +P + + R + +GG IL AKLA E G
Sbjct: 60 DPAYVQAYCQGTLDPKAQRRIGLP----WTEAIAHRTCI-----SIGGAILTAKLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH D G GFC + D+++ I +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPDFGSGFCIFNDLAIATRMIQKLAGIRKVLIVDLDVHQGDGTAFIFK 170
Query: 212 SDSRVYILDMFNPGIYPRDYEA 233
+D V+ + +P +A
Sbjct: 171 NDPDVFTFSLHCEANFPGRKQA 192
>gi|424852222|ref|ZP_18276619.1| acetoin dehydrogenase [Rhodococcus opacus PD630]
gi|356666887|gb|EHI46958.1| acetoin dehydrogenase [Rhodococcus opacus PD630]
Length = 410
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 7 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPDAASDADLLRIHTP 64
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 65 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 118
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 119 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 177
Query: 205 GHEKDFSSDSRVYILDMFN 223
G + F+ D RV + +
Sbjct: 178 GVQHAFAHDPRVLTISLHQ 196
>gi|332307586|ref|YP_004435437.1| histone deacetylase [Glaciecola sp. 4H-3-7+YE-5]
gi|332174915|gb|AEE24169.1| Histone deacetylase [Glaciecola sp. 4H-3-7+YE-5]
Length = 318
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLK 74
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
V+S Y+ L ++E P A+ R++ +P+ +Q V GT++
Sbjct: 75 RVYSPDYVNGLTQG-----VLE--PKAM-------RRIGFPWSEQLIQRSLTAVAGTVMT 120
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ LA E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG
Sbjct: 121 STLALEQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQG 180
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPR 229
+G K S++ +V+ + + +P
Sbjct: 181 DGTAKLASNNPKVFTVSLHGEKNFPH 206
>gi|410642129|ref|ZP_11352647.1| histone deacetylase 11 [Glaciecola chathamensis S18K6]
gi|410138446|dbj|GAC10834.1| histone deacetylase 11 [Glaciecola chathamensis S18K6]
Length = 318
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLK 74
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
V+S Y+ L L P + R++ +P+ +Q V GT++
Sbjct: 75 RVYSPDYVNGLTQG------------VLDPKAM--RRIGFPWSEQLIQRSLTAVAGTVMT 120
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ LA E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG
Sbjct: 121 STLALEQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQG 180
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPR 229
+G K S++ +V+ + + +P
Sbjct: 181 DGTAKLASNNPKVFTVSLHGEKNFPH 206
>gi|55980444|ref|YP_143741.1| acetoin utilization protein AcuC [Thermus thermophilus HB8]
gi|55771857|dbj|BAD70298.1| acetoin utilization protein AcuC (putative T-histone deacetylase)
[Thermus thermophilus HB8]
Length = 374
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G + HPF + + L + G + P EAS+E++L VHSE
Sbjct: 2 VIYREEYRLYNFGPD--HPFSPVRLEMLTSLLQALGVW--RAPLSPPEASREEVLSVHSE 57
Query: 97 SYLKSLQSS------PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAK 148
+K ++++ P++ + +FP ++L VGGT+ A+ +A
Sbjct: 58 RLVKRVEAASRGELYPDLEHYLGTGDTPVFPGMDRAARIL------VGGTLEGARRIMAG 111
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+ + +GGG HH D GFC Y D+S+ I + Q+ + RV +D+D H G+G +
Sbjct: 112 EKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRH-MTQVGL-RVAYVDIDVHHGDGVQW 168
Query: 209 DFSSDSRVYILDMFNPGIY 227
+ V L + G Y
Sbjct: 169 IHYEEGEVLTLSLHESGRY 187
>gi|410697943|gb|AFV77011.1| deacetylase, histone deacetylase/acetoin utilization protein
[Thermus oshimai JL-2]
Length = 293
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPL-EASKEDLLVVHSESYLKSL---QSSPNVS 109
HPF K+ + + L G L ++EP E KE L + H YL+ + S S
Sbjct: 17 HPFPLYKYRGVAEAL--RGLL----LLEPAPEVPKEALFLAHDPLYLERVFREGLSRKES 70
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ + +P F ++R + GGT++AA A E G +N+ GG HH D
Sbjct: 71 LRLGLP----FTPAFLRRAL-----HAAGGTLMAALDALEEGLGLNLAGGTHHAFPDRAE 121
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
G+ + D+++ + + + RV+++DLDAHQGNG F D VY L + YP
Sbjct: 122 GYSLFNDVAVAVAWLRRRGFSGRVLVLDLDAHQGNGTAVFFGQDPTVYTLSLHGERNYP 180
>gi|410644684|ref|ZP_11355159.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
gi|410135692|dbj|GAC03558.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
Length = 300
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L S G + K +P + L V+S
Sbjct: 4 PLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLKRVYS 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
Y+ L L P + R++ +P+ +Q V GT++ + LA
Sbjct: 61 PDYVNGLTQG------------VLDPKAM--RRIGFPWSEQLIQRSLTAVAGTVMTSNLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG+G
Sbjct: 107 LEQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPR 229
K S++ +V+ + + +P
Sbjct: 167 KLASNNPKVFTVSLHGEKNFPH 188
>gi|416407187|ref|ZP_11688248.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
gi|357260908|gb|EHJ10237.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
Length = 283
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 125 VQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
QR++ P+ + VGGTIL AKLA + G A N GG HH + G GFC + D
Sbjct: 54 AQRRIGLPWSEALVKRTCIAVGGTILTAKLALKFGLACNTAGGTHHAFPNYGSGFCIFND 113
Query: 177 ISL--CIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+++ C+ QL + +V+IIDLD HQG+G K F +D V+ M +PR+ +
Sbjct: 114 LAIATCV---LQQLKLVQKVLIIDLDVHQGDGTAKIFENDETVFTFSMHCESNFPREKQ 169
>gi|389681767|ref|ZP_10173111.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
gi|388554302|gb|EIM17551.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
Length = 306
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P KE L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLMRPELCPKEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDG 164
>gi|154687111|ref|YP_001422272.1| hypothetical protein RBAM_026830 [Bacillus amyloliquefaciens FZB42]
gi|394992687|ref|ZP_10385460.1| hypothetical protein BB65665_09566 [Bacillus sp. 916]
gi|154352962|gb|ABS75041.1| AcuC [Bacillus amyloliquefaciens FZB42]
gi|393806452|gb|EJD67798.1| hypothetical protein BB65665_09566 [Bacillus sp. 916]
Length = 388
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRAAAKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|385265874|ref|ZP_10043961.1| acetoin utilization protein AcuC [Bacillus sp. 5B6]
gi|385150370|gb|EIF14307.1| acetoin utilization protein AcuC [Bacillus sp. 5B6]
Length = 388
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRTAAKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|300864305|ref|ZP_07109183.1| histone deacetylase superfamily protein [Oscillatoria sp. PCC 6506]
gi|300337694|emb|CBN54329.1| histone deacetylase superfamily protein [Oscillatoria sp. PCC 6506]
Length = 305
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP++Y DY + H F +K+ + + L ++G ++ P +E + +
Sbjct: 1 MELPIVYHNDY---VAPLPPGHRFPMAKFQLLSEMLLADGVAVRSQFHLPTLPKREWIEL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH Y++ +L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHEPDYVQAYYNGTLDAKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 107 ISHGIACNTAGGTHHAFPSYGSGFCIFNDLAIASRLLQKMGLVQKVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDM 221
F DS V+ M
Sbjct: 167 VIFQDDSSVFTFSM 180
>gi|218528759|ref|YP_002419575.1| histone deacetylase superfamily protein [Methylobacterium
extorquens CM4]
gi|218521062|gb|ACK81647.1| histone deacetylase superfamily [Methylobacterium extorquens CM4]
Length = 297
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRA-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRD 230
+ + ++ L + YP D
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD 187
>gi|357974943|ref|ZP_09138914.1| histone deacetylase superfamily protein [Sphingomonas sp. KC8]
Length = 304
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++ PDY +S FD K+G L G + EP+ +E + VH
Sbjct: 4 IVHHPDY-VSPAAPGSRFSFD--KYGLAMMALDEAGAPFEMHEPEPM--PREWIAAVHDA 58
Query: 97 SYLKSLQSSPNVSIIIEVPP-------VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y+ + I VPP A+ P+ + +R L P GGT LAAKLA
Sbjct: 59 DYVDQV-------IAACVPPEKERRIGFAVTPH-VARRAQLVP-----GGTWLAAKLALA 105
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G+A N GG HH AD G G+C + D+++ + Q + RVMI+DLD HQG+G
Sbjct: 106 HGFAANSAGGSHHALADTGAGYCVFNDLAITANRLIAQGDAKRVMIVDLDVHQGDGTAIL 165
Query: 210 FSSDSRVYILDMFNPGIYP 228
+ V+ L + +P
Sbjct: 166 MAGRDDVFTLSIHADKNFP 184
>gi|387899577|ref|YP_006329873.1| acetoin dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387173687|gb|AFJ63148.1| acetoin dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 397
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 15 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRTAAKEELALVHTE 72
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHDAASLL------VGGTLTAADYVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 127 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 184
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 185 VQFTFYDRSDVCTVSFHETGRY 206
>gi|384266527|ref|YP_005422234.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380499880|emb|CCG50918.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 388
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D+ IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQRRVLLTYDLLQAADAFDEGDIVTPRTAAKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHDAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|408405858|ref|YP_006863841.1| histone deacetylase superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366454|gb|AFU60184.1| putative histone deacetylase superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 322
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY--LKSLQSSP 106
G E HPF + + G L SE +D + EP+ + +D L H + Y L + S
Sbjct: 16 GFEGSHPFGTDRLGAFWSKLQSEN-VDNIVVEEPMLGTDQDALSFHDKEYVDLVRMASRH 74
Query: 107 NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG--TILAAKLAKER--GWAINVGGGFHH 162
++++ F V LY + ++A K +K R A N GG HH
Sbjct: 75 GGGMLLDRGDTPAFKG--VFEASLYVIGSTLAALDMVVAGKDSKGRKIDHAFNPIGGLHH 132
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D GGFC + DI + I A + I+RVM +D+DAH G+G +F D ++ D+
Sbjct: 133 ARRDTAGGFCVFNDIGVAILAARKKYGINRVMYVDIDAHHGDGVFYEFEDDPLLFFADIH 192
Query: 223 NPG--IYP 228
G +YP
Sbjct: 193 EDGRHLYP 200
>gi|300310969|ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1]
gi|300073754|gb|ADJ63153.1| deacetylase protein [Herbaspirillum seropedicae SmR1]
Length = 331
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A + A G A+N+ GG HH D G GFC + D
Sbjct: 88 QREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDHGAGFCVFNDA 147
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
++ + +RV I+DLD HQGNG + D V+ L + YP + E
Sbjct: 148 AIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNYPFEKE 202
>gi|407070923|ref|ZP_11101761.1| histone deacetylase/AcuC/AphA family protein [Vibrio cyclitrophicus
ZF14]
Length = 306
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW----GRICQFLSSEGFLDKNC-IVEPLEASKED 89
+PLIY P Y S L + + H + +K+ G + + S+ + +P+ S E
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKYQLLHGAVEALMDSDPLWKSQFEVFQPMPVSVEQ 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+ VH Y+ L S +P + R++ +P+ +Q+ GGT
Sbjct: 60 VKQVHDSEYVDLLISG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSGGTC 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA++A E G+AI++ GG+HH D G GFC D+ L +A +I +V+I+D D H
Sbjct: 106 LAAEMAIESGFAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDSDVH 165
Query: 202 QGNG 205
G+G
Sbjct: 166 HGDG 169
>gi|359767856|ref|ZP_09271638.1| putative acetoin utilization protein [Gordonia polyisoprenivorans
NBRC 16320]
gi|378717648|ref|YP_005282537.1| putative acetoin dehydrogenase [Gordonia polyisoprenivorans VH2]
gi|359314772|dbj|GAB24471.1| putative acetoin utilization protein [Gordonia polyisoprenivorans
NBRC 16320]
gi|375752351|gb|AFA73171.1| putative acetoin dehydrogenase [Gordonia polyisoprenivorans VH2]
Length = 414
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + +PL+ + L+ VHS Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMSLARSLGVLDDVDLADPLQIDDDALIPVHSRDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKLAKERG--WAINVGGGFHHCSAD 166
P +A LF V R VGGT+ AA+ A+N+GGG HH
Sbjct: 80 GPLLARLFGLGDADNPVFDGMHEAARLLVGGTLAAAQAVASGSVRRAVNIGGGMHHAMRS 139
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D S+ I + + R+ ID+DAH G+G + +F +D RV + +
Sbjct: 140 RAAGFCIYNDCSVAIRW-LLDHGYDRIAYIDIDAHHGDGVQAEFVADPRVMTISL 193
>gi|294056259|ref|YP_003549917.1| histone deacetylase superfamily protein [Coraliomargarita
akajimensis DSM 45221]
gi|293615592|gb|ADE55747.1| histone deacetylase superfamily [Coraliomargarita akajimensis DSM
45221]
Length = 302
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
Y PDY FL + + HPF K+ + + E D+ I P++ ++ DL H
Sbjct: 4 FYHPDY---FLPLPEGHPFPMEKFPQ-----AYERLKDQLRIAPPMDLTRADLERAHCPH 55
Query: 98 YLKSL-----QSSPNVSIIIEVPPVALFPNC-LVQRKVLYPFRKQVGGTILAAKLAKERG 151
YL ++ ++ P+ + + + L N L+ R L + GT+ A A E G
Sbjct: 56 YLDAVSFDDDRNHPHGLLSYDRNRLGLPANPQLLTRSTL-----ETAGTVAATLHALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDF 210
A N+ GG HH D+G GFC DI++ I Y ++I+D DAHQGN + F
Sbjct: 111 CAANLAGGTHHAFPDKGLGFCVLNDIAVAIEYLRAHGRCPDHILIVDTDAHQGNANNAYF 170
Query: 211 SSDSRVYILDMFNPGIYPRDYE 232
D V+ + YP E
Sbjct: 171 RDDPSVFTYSIHVGKNYPAKKE 192
>gi|344202956|ref|YP_004788099.1| histone deacetylase [Muricauda ruestringensis DSM 13258]
gi|343954878|gb|AEM70677.1| Histone deacetylase [Muricauda ruestringensis DSM 13258]
Length = 300
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG ++ EP + H E Y K L
Sbjct: 18 HRFPMIKYELLPQQLIHEGTCTEHNFFEPGLPEDHHIFAAHDEVYFKDL----------- 66
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
V L + RK+ +P ++ GTI A E G ++N+ GG HH +
Sbjct: 67 ---VDLNLSKSAVRKIGFPLSDELVLRERIIADGTIKGCDFALEHGISMNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ Y +++I+DLD HQGNG + F +D V+ M G
Sbjct: 124 DRGEAFCMLNDQAIGARYLLNNELAKKILIVDLDVHQGNGTAEIFKTDHSVFTFSMHGNG 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|398931340|ref|ZP_10665142.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM48]
gi|398163792|gb|EJM51942.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM48]
Length = 325
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
RIL S + + I LPLIY DY F H F K+ + L G
Sbjct: 8 GRILLS--FLNEIIMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDVD 62
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRK 135
++ P + L + H SY++ S S + +P + L +R V +
Sbjct: 63 LLRPDLCPADILALAHDPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----R 113
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
VGG++LAA+ A E G A ++ GG HH D GFC + D+++ HY ++RV+I
Sbjct: 114 AVGGSLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLI 173
Query: 196 IDLDAHQGNG 205
D D HQG+G
Sbjct: 174 FDCDVHQGDG 183
>gi|427724084|ref|YP_007071361.1| histone deacetylase [Leptolyngbya sp. PCC 7376]
gi|427355804|gb|AFY38527.1| Histone deacetylase [Leptolyngbya sp. PCC 7376]
Length = 300
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 25/195 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P+IY P+Y I + H F K+ R+ + L + + + EP + L +VH
Sbjct: 3 FPVIYHPNY---VTPIPEEHRFPMPKFKRLYEMLLRDDVIRSEQVYEPEFPEMDWLELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ + ++ + QR++ P+ K V GGT+ AKL
Sbjct: 60 DRNYIDAYRNGT--------------LDKKAQRRIGLPWSKGVVTRTLTAIGGTVTTAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A N GG HH G GFC D+++ +++IIDLD HQG+G
Sbjct: 106 ALEHGLACNTAGGTHHAFPTYGSGFCILNDLAIAAKTVRHLGLAKKILIIDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDM 221
F + VY M
Sbjct: 166 AFIFQDEPDVYTFSM 180
>gi|423693709|ref|ZP_17668229.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
gi|388002286|gb|EIK63615.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
Length = 306
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + + ++ P + L +
Sbjct: 1 MPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPPLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|223043530|ref|ZP_03613575.1| acetoin utilization protein AcuC [Staphylococcus capitis SK14]
gi|417905938|ref|ZP_12549732.1| histone deacetylase family protein [Staphylococcus capitis VCU116]
gi|222443018|gb|EEE49118.1| acetoin utilization protein AcuC [Staphylococcus capitis SK14]
gi|341598324|gb|EGS40835.1| histone deacetylase family protein [Staphylococcus capitis VCU116]
Length = 390
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL IV P A+ E+L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKDANFLKNEHIVIPRIATDEELALIHQYDYIQAIRHASHGILSEH 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGG 169
E L + +Q K ++ ++ G L G IN +GGG HH
Sbjct: 85 EAKKYGLNGDDTLQFKHMHRHSARIVGGALNLADCIMDGTFINGCHLGGGLHHALPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ Y V+ RVM+ID DAH G+G + F +D+R+ + G
Sbjct: 145 GFCIYNDVAITAKY-LVEKYHQRVMVIDTDAHHGDGTQWSFYTDNRIMTYSIHETG 199
>gi|375363389|ref|YP_005131428.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371569383|emb|CCF06233.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 388
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D IV P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQDHPFNQQRVLLTYDLLQAADAFDDGDIVTPRTATKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|384430669|ref|YP_005640029.1| histone deacetylase [Thermus thermophilus SG0.5JP17-16]
gi|333966137|gb|AEG32902.1| Histone deacetylase [Thermus thermophilus SG0.5JP17-16]
Length = 375
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G + HPF + + L + G + P EAS+E++L VHSE
Sbjct: 2 VIYRDEYRLYNFGPD--HPFSPVRLEMLTSLLEALGVW--RAPLSPPEASREEVLSVHSE 57
Query: 97 SYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--LA 147
+K ++++ + ++P L FP ++L VGGT+ A+ LA
Sbjct: 58 RLVKRVEAASRGELYPDLPEYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRILA 111
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCI-HYAFVQLNISRVMIIDLDAHQGNGH 206
E+ + +GGG HH D GFC Y D+S+ I H L RV +D+D H G+G
Sbjct: 112 GEKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTRAGL---RVAYVDIDVHHGDGV 167
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ + V L + G Y
Sbjct: 168 QWIHYEEGEVLTLSLHESGRY 188
>gi|163847420|ref|YP_001635464.1| histone deacetylase superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525269|ref|YP_002569740.1| histone deacetylase superfamily protein [Chloroflexus sp. Y-400-fl]
gi|163668709|gb|ABY35075.1| histone deacetylase superfamily [Chloroflexus aurantiacus J-10-fl]
gi|222449148|gb|ACM53414.1| histone deacetylase superfamily [Chloroflexus sp. Y-400-fl]
Length = 298
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + SEG + + P AS +L H +Y++ + + S I
Sbjct: 17 HRFPMEKYALLRERVLSEGIVTPERLHVPEPASITELCRAHDANYVERVINGHLTSAEIR 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
P +V+R R+ G TI A ++A G +N+ GG HH AD G G+C
Sbjct: 77 RIGFPWSPQ-MVERS-----RRSAGATIAACRVALSEGVGVNLAGGTHHAFADAGAGYCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D ++ + + R+ IID D HQG+G F+ D V+ + +P
Sbjct: 131 FNDAAVAARAMQSEGRVQRIAIIDCDVHQGDGTAAIFTGDPTVFTFSIHGAHNFP 185
>gi|338530821|ref|YP_004664155.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337256917|gb|AEI63077.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 586
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 35 LPLIYSPDYDISFLGIEK---LHP--FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P Y Y + GIE + P D + W +L L + P S +
Sbjct: 17 VPAFYDESYRLPLTGIESSVGIEPRGVDFTTW-----YLLEARALRAQDVHHPQPVSLAE 71
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
L VH +YL+SL ++ I P + + L L R+ GGT+ AA+LA
Sbjct: 72 LTRVHDAAYLESLGQPETLARIFATDPADVPVDAL-----LSNLRRVCGGTLGAARLAVA 126
Query: 150 R-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
R G +N+ GGFHH + GGGFCA DI++ + + +++DLDAH +G +
Sbjct: 127 RKGPVVNMAGGFHHAAPARGGGFCAVNDIAVALAALHADGFDGQAVVLDLDAHPPDGTAE 186
Query: 209 DFSSDSRVYI 218
+ R ++
Sbjct: 187 CLAGQKRAWL 196
>gi|308174662|ref|YP_003921367.1| protein deacetylase [Bacillus amyloliquefaciens DSM 7]
gi|307607526|emb|CBI43897.1| protein deacetylase [Bacillus amyloliquefaciens DSM 7]
Length = 388
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + ++ IV P ASKE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQQRVLLTYDLLQAADAFEEGDIVAPRTASKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAKEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|254432288|ref|ZP_05045991.1| histone deacetylase family protein [Cyanobium sp. PCC 7001]
gi|197626741|gb|EDY39300.1| histone deacetylase family protein [Cyanobium sp. PCC 7001]
Length = 304
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+ PL+Y P Y + H F +K+ + + L + +PL + L
Sbjct: 1 MRPPLVYHPAYSAP---LPSSHRFPMAKFRMLLERLLQLDLATPAALHQPLPVPRRWLEA 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y ++ + S I +P LV+R L VGGT+L A+LA
Sbjct: 58 VHPRAYHQAFARAELSHADQRRIGLPAT----QPLVRRTWL-----SVGGTLLTARLALR 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH G GFC + D+++ + + R++++DLD HQG+G
Sbjct: 109 HGLACHLAGGTHHAFPTYGSGFCIFNDVAVACSVLLQEGAVRRLLVVDLDVHQGDGTAAI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F+++ RV+ L +P
Sbjct: 169 FAAEPRVFTLSAHGASNFP 187
>gi|187608485|ref|NP_001120462.1| histone deacetylase 8 [Xenopus (Silurana) tropicalis]
gi|269969357|sp|B1H369.1|HDAC8_XENTR RecName: Full=Histone deacetylase 8; Short=HD8
gi|170284669|gb|AAI61282.1| LOC100145561 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + G L + +V+P AS E++ H++SYL+ L S + E L +C
Sbjct: 36 LIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLEYGLGYDCP 95
Query: 125 VQRKVLYPFRKQVGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
+ + Y + VGG L A +A + AIN GG+HH DE GFC D L I
Sbjct: 96 ITEGI-YDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGI 154
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ RV+ +D+D H G+G E FS S+V + + F+PG +P
Sbjct: 155 --LKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFP 201
>gi|351732315|ref|ZP_08950006.1| histone deacetylase [Acidovorax radicis N35]
Length = 314
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------R 134
L AS +L + H+ Y+ ++ +PP+A QR++ +P+ R
Sbjct: 44 LPASDRELALAHAPDYIDAIADG-------TLPPLA-------QREIGFPWSEAMAERAR 89
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-- 192
+ VG T+ A+++A G A N+ GG HH AD+G GFC + D+++ +Q+ +R
Sbjct: 90 RSVGATVAASRVALREGVAGNLAGGTHHAYADKGSGFCVFNDVAVAAR--LMQVEWARGG 147
Query: 193 ----------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
V +IDLD HQGNG F D V+ L + +P
Sbjct: 148 GDGRAARPLQVAVIDLDVHQGNGTAHIFRGDHSVFTLSLHGARNFP 193
>gi|228472500|ref|ZP_04057260.1| histone deacetylase family protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275913|gb|EEK14669.1| histone deacetylase family protein [Capnocytophaga gingivalis ATCC
33624]
Length = 287
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 18/181 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-----LQSSPNV 108
H F K+ + + L EG ++ P + S D + H Y+++ L +
Sbjct: 5 HRFPMEKYALLHEQLLWEGVAEEEDFFAPAKVSIADASLAHDRGYVEAFVGLHLPERTRI 64
Query: 109 SI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
I ++ P + LVQ GTI A A E G A N+ GG HH +D
Sbjct: 65 RIGFVQSPQLVARELTLVQ------------GTIDGAHYALEEGIAFNIAGGTHHAYSDR 112
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y R++I+DLD HQGNG + F+ V+ M Y
Sbjct: 113 GEGFCMLNDQAVAAAYLLKTGRAKRILIVDLDVHQGNGTAEIFAHREEVFTFSMHARDNY 172
Query: 228 P 228
P
Sbjct: 173 P 173
>gi|398996125|ref|ZP_10698987.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM21]
gi|398127661|gb|EJM17067.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM21]
Length = 325
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 19 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPAQILA 75
Query: 92 VVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ H +Y++ S S + +P + L +R V + VGG++LAA+ A
Sbjct: 76 LAHDAAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQAL 126
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 127 EHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 183
>gi|326796258|ref|YP_004314078.1| histone deacetylase superfamily protein [Marinomonas mediterranea
MMB-1]
gi|326547022|gb|ADZ92242.1| histone deacetylase superfamily [Marinomonas mediterranea MMB-1]
Length = 307
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P ++ P+Y I F H F SK+ + + LS G L EP S L+ H
Sbjct: 2 IPFVFHPNYSIPF---PSNHRFPMSKFRLLAEQLSELGILTSENCFEPSPLSLTALMRAH 58
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ Q + I +P + LV+R + + V GTIL A+LA + G
Sbjct: 59 DKHYVQRFVRGQLTQKEEKEIGLP----WSEWLVERTL-----RAVSGTILTAELALDHG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLC----IHYAFVQLNISRVMIIDLDAHQGNGHE 207
A ++ GG HH G GFC + D+++ IH + +VMI+D D HQG+G
Sbjct: 110 LACHLAGGTHHAHPSHGAGFCIFNDLAVASIDLIHRGLAK----KVMILDCDVHQGDGTV 165
Query: 208 KDFSSDSRVYILDMFNPGIYPRD 230
F++ V + YP D
Sbjct: 166 AFFTNRDDVIPVSWHCDENYPVD 188
>gi|404493709|ref|YP_006717815.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
gi|77545744|gb|ABA89306.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
Length = 299
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 27 YFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEAS 86
YFD F LP EK H F +SK+ + Q + + + + P S
Sbjct: 5 YFDQHTFFLP--------------EK-HRFPASKYSMLRQRVLTANVVPPENMRTPEPVS 49
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
DL H+ YL + I + + P LVQR + G T+ +
Sbjct: 50 DADLHRAHTGDYLHRFEHGLLTKAEIRLIGLPWSPE-LVQR-----VKYTAGATVAVCRH 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G +++GGG HH +D G G+C Y D+ + + ++ RV++ID D HQGNG
Sbjct: 104 ALDDGVGLSLGGGTHHACSDHGQGYCLYNDVVVAARALQAEGSVRRVLVIDCDVHQGNGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
+ + DS ++ + +P
Sbjct: 164 AETTTGDSSIFTFSIHGEKNFP 185
>gi|340618079|ref|YP_004736532.1| histone deacetylase [Zobellia galactanivorans]
gi|339732876|emb|CAZ96251.1| Deacetylase, histone deacetylase family [Zobellia galactanivorans]
Length = 300
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y S + + H F K+ + + L EG EP + + ++ VH
Sbjct: 2 LKIAYHPIYKHS---LPEGHRFPMLKYELLPKQLLHEGTCTAENFFEPEIPNDKYIVAVH 58
Query: 95 SESY---LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y L +L+ S + I P L++R+ R GTI A + A E G
Sbjct: 59 EPEYFYDLLNLKISSRDARKIGFP----LTEDLIERE-----RIIADGTIQACRFAIENG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+N+ GG HH D G FC D ++ Y +++I+DLD HQGNG + F
Sbjct: 110 IAMNIAGGTHHAYTDHGEAFCMLNDQAIGARYLQAHQLAKKILIVDLDVHQGNGTAEIFG 169
Query: 212 SDSRVYILDMFNPGIYP 228
+D+ V+ M YP
Sbjct: 170 NDTSVFTFSMHGASNYP 186
>gi|425901732|ref|ZP_18878323.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892988|gb|EJL09464.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 306
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P +E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPREILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDG 164
>gi|398869111|ref|ZP_10624496.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
gi|398231625|gb|EJN17611.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
Length = 312
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 6 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPQLCPADILA 62
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ H SY++ S ++S + + L +R V + VGG++LAA+ A E G
Sbjct: 63 LAHDPSYIERYMSG-DLSREDQRRLGLPWSEALTRRTV-----RAVGGSLLAAEQALEHG 116
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G
Sbjct: 117 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDG 170
>gi|421730618|ref|ZP_16169744.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451345874|ref|YP_007444505.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens IT-45]
gi|407074772|gb|EKE47759.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849632|gb|AGF26624.1| acetoin utilization protein AcuC [Bacillus amyloliquefaciens IT-45]
Length = 388
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + D IV+P A+KE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQDHPFNQQRVLLTYDLLQAADAFDDGDIVKPRTATKEELGLVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ ++ S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAAEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|312963190|ref|ZP_07777675.1| histone deacetylase superfamily [Pseudomonas fluorescens WH6]
gi|311282701|gb|EFQ61297.1| histone deacetylase superfamily [Pseudomonas fluorescens WH6]
Length = 306
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + ++ P + L +
Sbjct: 1 MPLPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTLDSQLLRPPLCPPQILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|392538695|ref|ZP_10285832.1| histone deacetylase superfamily protein [Pseudoalteromonas marina
mano4]
Length = 299
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + GFL +P +AS L + H
Sbjct: 1 MQLYYHPLY--SNLPLPERHRFPIQKYQRLKTEIEHLGFL-PTAFKQPAKASPSQLALCH 57
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SE Y+ + + S I P A LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEQYINNFLTGNLSDKAIKKIGFPYSAQ----LVERTLL-----SVGGSIQAAEEALKSG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + +
Sbjct: 109 LACNLSGGYHHAYSDYGSGFCIFNDLAIAATHLLNTHKAKTVLIFDCDVHQGDGTAQIIN 168
Query: 212 SDSRVYIL 219
S I+
Sbjct: 169 QQSHKNII 176
>gi|390445539|ref|ZP_10233279.1| histone deacetylase superfamily protein [Nitritalea halalkaliphila
LW7]
gi|389661825|gb|EIM73419.1| histone deacetylase superfamily protein [Nitritalea halalkaliphila
LW7]
Length = 300
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG L + P + + +L H SY L+ +S+
Sbjct: 18 HRFPMEKYELLPEQLLYEGTLRPSNFFSPEALADDWILKAHDPSYFNRLK---GLSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV R+V + G++ AA AKE G A+N+ GG HH D G GF
Sbjct: 75 EIRRTGFPLSQQLVDREV-----HIMHGSVQAALYAKEFGIAMNIAGGTHHAFKDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D+++ Y + +++IIDLD HQGNG F+ V+ M YP
Sbjct: 130 CLLNDLAITAFYLLEKKLARKILIIDLDVHQGNGTAAIFAEVPEVFTFSMHGEANYPMHK 189
Query: 232 E 232
E
Sbjct: 190 E 190
>gi|408479141|ref|ZP_11185360.1| putative histone deacetylase family protein [Pseudomonas sp. R81]
Length = 306
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPQLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG+ILAA+ A + G
Sbjct: 60 DAGYIERYMGGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALDHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|406597491|ref|YP_006748621.1| histone deacetylase family protein [Alteromonas macleodii ATCC
27126]
gi|407684505|ref|YP_006799679.1| histone deacetylase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|406374812|gb|AFS38067.1| histone deacetylase family protein [Alteromonas macleodii ATCC
27126]
gi|407246116|gb|AFT75302.1| histone deacetylase family protein [Alteromonas macleodii str.
'English Channel 673']
Length = 300
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L AKLA E G A+N+ GG+HH AD G GFC + D+
Sbjct: 78 RRIGFPWSQQLIERTRTAVAGTCLTAKLALEHGKALNLTGGYHHAFADFGSGFCLFNDLY 137
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
L ++ V+I+DLD HQG+G K +D ++ L + +P
Sbjct: 138 LAAKTMQQTPSVENVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFP 187
>gi|398852713|ref|ZP_10609361.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM80]
gi|398243287|gb|EJN28878.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM80]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|399000980|ref|ZP_10703700.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
gi|398128735|gb|EJM18117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDTDLLRPDLCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|332141953|ref|YP_004427691.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410862358|ref|YP_006977592.1| histone deacetylase family protein [Alteromonas macleodii AltDE1]
gi|327551975|gb|AEA98693.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410819620|gb|AFV86237.1| histone deacetylase family protein [Alteromonas macleodii AltDE1]
Length = 324
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + + H F K+ I L G +DK + P L
Sbjct: 24 LMTTPLVFHPIY--SQLDLPERHRFPIEKYVGIRDELIRRG-IDKARFITPSPLDFSVLT 80
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
+ Y+++L +S N+ + R++ +P+ +Q V GT L
Sbjct: 81 DNYDRQYVEAL-TSGNL-------------DKKAMRRIGFPWSQQLIERTRTAVAGTCLT 126
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
A LA + G A+N+ GG+HH AD G GFC + D+ L I V+I+DLD HQG
Sbjct: 127 ASLALQHGKALNLTGGYHHAFADFGSGFCLFNDLYLAAKTMQKSSAIDNVLIVDLDVHQG 186
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYP 228
+G K +D ++ L + +P
Sbjct: 187 DGTAKLAENDRDIFTLSIHGEKNFP 211
>gi|23006878|ref|ZP_00048995.1| COG0123: Deacetylases, including yeast histone deacetylase and
acetoin utilization protein [Magnetospirillum
magnetotacticum MS-1]
Length = 275
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
++ P Y+ + + H F K+GR+ + L + G L + V P A L H +
Sbjct: 1 MFHPAYEAA---LPAGHRFPMGKYGRLAEILRARG-LAPDGFVTPEPAGAALLSGAHEAA 56
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKE 149
Y++++ + +VP V+R + P + V GGT+ AA+LA E
Sbjct: 57 YVEAV-------LAFQVPRA-------VERAIGLPVTEAVAARSRASAGGTLCAARLALE 102
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GG HH G GFC + D+++ + I+R ++IDLD HQG+G
Sbjct: 103 HGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGRIARALVIDLDVHQGDGTADC 162
Query: 210 FSSDSRVYILDMFNPGIYPRD 230
+ + ++ L + YP D
Sbjct: 163 LAREPDLFTLSIHCERNYPYD 183
>gi|410625716|ref|ZP_11336491.1| histone deacetylase 11 [Glaciecola mesophila KMM 241]
gi|410154792|dbj|GAC23260.1| histone deacetylase 11 [Glaciecola mesophila KMM 241]
Length = 318
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDKLISLG-VPKAQFHQPDALTPSHLK 74
Query: 92 VVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
V+S Y+ L P I P + L+QR + V GT++ + LA
Sbjct: 75 RVYSPDYVNGLTQGVLDPKAMRRIGFP----WSEQLIQRSL-----TAVAGTVMTSSLAL 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH A+ G GFC + D+ L I +V+I D D HQG+G K
Sbjct: 126 EHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNMLQTPTIRKVLIFDCDVHQGDGTAK 185
Query: 209 DFSSDSRVYILDMFNPGIYPR 229
S++ RV+ + + +P
Sbjct: 186 LASNNKRVFTVSIHGEKNFPH 206
>gi|384160504|ref|YP_005542577.1| hypothetical protein BAMTA208_14615 [Bacillus amyloliquefaciens
TA208]
gi|384165441|ref|YP_005546820.1| protein deacetylase [Bacillus amyloliquefaciens LL3]
gi|384169587|ref|YP_005550965.1| acetoin dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328554592|gb|AEB25084.1| hypothetical protein BAMTA208_14615 [Bacillus amyloliquefaciens
TA208]
gi|328912996|gb|AEB64592.1| protein deacetylase [Bacillus amyloliquefaciens LL3]
gi|341828866|gb|AEK90117.1| acetoin dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 388
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSP Y + HPF+ + L + ++ IV P ASKE+L +VH+E
Sbjct: 6 FVYSPSYQT--YQFHQEHPFNQQRVLLTYDLLQAADAFEEGDIVAPRTASKEELALVHTE 63
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++++ + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVELAGAGRLPAKEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNG 205
+ A N+GGG HH GFC Y D ++ I Y +Q N ++V+ ID DAH G+G
Sbjct: 118 TGQARHACNLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKNYGAKVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F S V + G Y
Sbjct: 176 VQFTFYDRSDVCTVSFHETGRY 197
>gi|421141919|ref|ZP_15601898.1| Histone deacetylase superfamily protein [Pseudomonas fluorescens
BBc6R8]
gi|404506939|gb|EKA20930.1| Histone deacetylase superfamily protein [Pseudomonas fluorescens
BBc6R8]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDG 164
>gi|241763690|ref|ZP_04761739.1| histone deacetylase superfamily [Acidovorax delafieldii 2AN]
gi|241367079|gb|EER61453.1| histone deacetylase superfamily [Acidovorax delafieldii 2AN]
Length = 311
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
L + + H F +K+G + L+ + L + E AS +L + H SY++++ +
Sbjct: 11 LPLPQGHRFPMAKYGMLRDRLALD--LPGVALQEAPAASDGELALAHVPSYIQAVATG-- 66
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGG 159
+ P A QR++ +P+ R+ VG TI A + A G A N+ GG
Sbjct: 67 -----TLAPAA-------QREIGFPWSPAMAERARRSVGATIAACRAALREGVAGNLAGG 114
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISR---------VMIIDLDAHQGNGHEKDF 210
HH AD G GFC + DI++ +Q +R V +IDLD HQGNG F
Sbjct: 115 THHAYADRGSGFCVFNDIAVAAR--LMQAERARAGVKAQPLCVAVIDLDVHQGNGTAHLF 172
Query: 211 SSDSRVYILDMFNPGIYP 228
D V+ L + +P
Sbjct: 173 QGDDSVFTLSLHGARNFP 190
>gi|431798624|ref|YP_007225528.1| deacetylase [Echinicola vietnamensis DSM 17526]
gi|430789389|gb|AGA79518.1| deacetylase, histone deacetylase/acetoin utilization protein
[Echinicola vietnamensis DSM 17526]
Length = 300
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + + EP S+E ++ H YL+ L +S+
Sbjct: 18 HRFPMEKYELLPEQLLYEGTIAAHNLFEPNALSEEWIVGPHKAGYLQKLTE---LSLTKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + G++ A + G A+N+ GG HH +D G GF
Sbjct: 75 EIRKTGFPLSAALVEREI-----HIMDGSVQGCLFALKHGIAMNIAGGTHHAFSDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ +Y + +V+++DLD HQGNG + F + V+ M YP
Sbjct: 130 CLLNDIAISANYLVQKKLAKQVLVVDLDVHQGNGTAEIFKDNPAVFTFSMHGAANYPLHK 189
Query: 232 EA 233
E
Sbjct: 190 ET 191
>gi|399008851|ref|ZP_10711308.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
gi|398114713|gb|EJM04517.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P +E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPREILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDG 164
>gi|119468440|ref|ZP_01611531.1| putative histone deacetylase family protein [Alteromonadales
bacterium TW-7]
gi|119447948|gb|EAW29213.1| putative histone deacetylase family protein [Alteromonadales
bacterium TW-7]
Length = 302
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYTHVKKLGLIGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFATQTLINSGEVTNVLIFDLDVHQGDG 167
>gi|443243613|ref|YP_007376838.1| deacetylase [Nonlabens dokdonensis DSW-6]
gi|442801012|gb|AGC76817.1| deacetylase [Nonlabens dokdonensis DSW-6]
Length = 307
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE-DLLVVHSESYLKSLQSSPNVSIII 112
H F K+ + Q L EG + EP + E D+L VH++ YL+ L+
Sbjct: 18 HRFPMLKYELLPQQLLHEGTAIETDFFEPSKLCNEVDVLRVHTDQYLEDLKE-------- 69
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCS 164
L + RK+ +P Q+ GTI A + A+NV GG HH
Sbjct: 70 ------LTLDKRAARKLGFPLSAQLVERELRIAQGTIEGCLKAYDHRVAMNVAGGTHHAY 123
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G FC D ++ Y +V+I+DLD HQGNG + F +D V+ M
Sbjct: 124 TDHGEAFCLLNDQAIAARYLQHHGLAEKVLIVDLDVHQGNGTAEIFQNDDSVFTFSMHGA 183
Query: 225 GIYP 228
G YP
Sbjct: 184 GNYP 187
>gi|441209584|ref|ZP_20974269.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
gi|440627075|gb|ELQ88895.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
Length = 369
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
R+ + G +D+ + P AS+EDLL VH +Y+ ++
Sbjct: 47 RMAGLVEVSGMIDELIRIAPRTASREDLLRVHDAAYIDRIERESA-------------DR 93
Query: 123 CLVQRKVLYPF--------RKQVGGTILAAKL----AKERGWAINVGGGFHHCSADEGGG 170
PF R GGTI AA+ A + +A+ G HH D G G
Sbjct: 94 GGDGGDGFTPFGPGSYDIARLAAGGTIAAAEAVLTGAADNAYALVRPPG-HHARRDTGMG 152
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC ++++ + I YA L + RV I+D D H GNG E + DS V + + ++P+D
Sbjct: 153 FCIFSNVCVAIEYARAHLGVQRVAIVDYDVHHGNGAESIYWDDSDVLTISLHQDRLFPQD 212
Query: 231 YEA 233
A
Sbjct: 213 TGA 215
>gi|49483975|ref|YP_041199.1| histone deacetylase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425848|ref|ZP_05602272.1| histone deacetylase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428515|ref|ZP_05604913.1| histone deacetylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431148|ref|ZP_05607525.1| histone deacetylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433830|ref|ZP_05610188.1| histone deacetylase [Staphylococcus aureus subsp. aureus E1410]
gi|257436747|ref|ZP_05612791.1| histone deacetylase [Staphylococcus aureus subsp. aureus M876]
gi|282904304|ref|ZP_06312192.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus C160]
gi|282906129|ref|ZP_06313984.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909045|ref|ZP_06316863.1| histone deacetylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911360|ref|ZP_06319162.1| histone deacetylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914529|ref|ZP_06322315.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M899]
gi|282919497|ref|ZP_06327232.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C427]
gi|282924875|ref|ZP_06332541.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C101]
gi|283958483|ref|ZP_06375934.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293503607|ref|ZP_06667454.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510623|ref|ZP_06669328.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus M809]
gi|293537164|ref|ZP_06671844.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M1015]
gi|295428305|ref|ZP_06820934.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590732|ref|ZP_06949370.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus MN8]
gi|384867304|ref|YP_005747500.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH60]
gi|415682541|ref|ZP_11447857.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|417889376|ref|ZP_12533466.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21195]
gi|418564576|ref|ZP_13128997.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582665|ref|ZP_13146741.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595345|ref|ZP_13158963.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418602071|ref|ZP_13165485.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418892471|ref|ZP_13446583.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898371|ref|ZP_13452440.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901243|ref|ZP_13455298.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909591|ref|ZP_13463585.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917638|ref|ZP_13471596.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923424|ref|ZP_13477339.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982748|ref|ZP_13530455.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986413|ref|ZP_13534096.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1500]
gi|81650911|sp|Q6GFX3.1|ACUC_STAAR RecName: Full=Acetoin utilization protein AcuC
gi|49242104|emb|CAG40804.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271542|gb|EEV03688.1| histone deacetylase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275356|gb|EEV06843.1| histone deacetylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278096|gb|EEV08744.1| histone deacetylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281923|gb|EEV12060.1| histone deacetylase [Staphylococcus aureus subsp. aureus E1410]
gi|257284098|gb|EEV14221.1| histone deacetylase [Staphylococcus aureus subsp. aureus M876]
gi|282313241|gb|EFB43637.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C101]
gi|282317307|gb|EFB47681.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C427]
gi|282321710|gb|EFB52035.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M899]
gi|282325055|gb|EFB55365.1| histone deacetylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327309|gb|EFB57604.1| histone deacetylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331421|gb|EFB60935.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595922|gb|EFC00886.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus C160]
gi|283790632|gb|EFC29449.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920009|gb|EFD97077.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M1015]
gi|291095273|gb|EFE25538.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466514|gb|EFF09035.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus M809]
gi|295127705|gb|EFG57342.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575618|gb|EFH94334.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus MN8]
gi|312437809|gb|ADQ76880.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195641|gb|EFU26028.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|341851634|gb|EGS92548.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21195]
gi|371975713|gb|EHO93005.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21264]
gi|374397105|gb|EHQ68323.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21345]
gi|374401872|gb|EHQ72924.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21342]
gi|377701912|gb|EHT26238.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377703517|gb|EHT27831.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377703793|gb|EHT28105.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377709408|gb|EHT33661.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377729947|gb|EHT54024.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377734148|gb|EHT58187.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377749703|gb|EHT73647.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377751400|gb|EHT75330.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG149]
gi|377759828|gb|EHT83708.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 389
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
+ N + + R VGG + A L G A+N +GGG HH
Sbjct: 84 DEAMKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKALNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|398980080|ref|ZP_10688815.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM25]
gi|398135039|gb|EJM24169.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM25]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDEDLLRPELCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRGYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|398879247|ref|ZP_10634346.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
gi|398197075|gb|EJM84064.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
Length = 306
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|242374025|ref|ZP_04819599.1| acetoin utilization protein [Staphylococcus epidermidis M23864:W1]
gi|242348276|gb|EES39878.1| acetoin utilization protein [Staphylococcus epidermidis M23864:W1]
Length = 391
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL I++P A+ ++L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKEAKFLKPEHIIKPRIATDDELALIHKYDYIQAIRHASHGILSEE 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTI-LAAKLAK---ERGWAINVGGGFHHCSADE 167
E L VQ + ++ + VGG + LA +L + G ++GGG HH +
Sbjct: 85 EAKKYGLNSEDTVQFRHMHRHSARIVGGALNLADRLMDGSLDNG--CHLGGGLHHAQSGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ Y + N RVMIID DAH G+G + F +D+++ + G
Sbjct: 143 ANGFCIYNDVAITAKYLVERYN-QRVMIIDTDAHHGDGTQWSFYTDNQIMTYSIHETG 199
>gi|220926539|ref|YP_002501841.1| histone deacetylase superfamily protein [Methylobacterium nodulans
ORS 2060]
gi|219951146|gb|ACL61538.1| histone deacetylase superfamily [Methylobacterium nodulans ORS
2060]
Length = 298
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P Y+ G+ H F K+GR+ + L G + N P A + + H
Sbjct: 2 LPVVFHPAYEA---GLPDGHRFPMRKYGRLAEILVERGLV-PNGFARPEPAGAGTVALAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y++ + + V IE + L + V R+ L GGT+LAA+LA G A
Sbjct: 58 DPFYVEQVLTG-TVPRAIETA-IGLPVDAGVARRAL----ASAGGTLLAARLALAGGLAG 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GG HH GGGFC + D+++ + I R +IIDLD HQG+G +++
Sbjct: 112 STAGGSHHGRRARGGGFCVFNDVAVAALALHREGTIRRALIIDLDVHQGDGTADCLAAEP 171
Query: 215 RVYILDMFNPGIYPRD 230
++ M YP D
Sbjct: 172 DLFTFSMHGEKNYPAD 187
>gi|314933887|ref|ZP_07841252.1| acetoin utilization protein AcuC [Staphylococcus caprae C87]
gi|313654037|gb|EFS17794.1| acetoin utilization protein AcuC [Staphylococcus caprae C87]
Length = 390
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL IV P A+ E+L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKDANFLKDEHIVIPRIATDEELALIHQYDYIQAIRHASHGILSEH 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGG 169
E L + +Q K ++ ++ G L G IN +GGG HH
Sbjct: 85 EAKKYGLNGDDTLQFKHMHRHSARIVGGALNLVDCIMDGTFINGCHLGGGLHHALPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ Y V+ RVM+ID DAH G+G + F +D+R+ + G
Sbjct: 145 GFCIYNDVAITAKY-LVEKYHQRVMVIDTDAHHGDGTQWSFYTDNRIMTYSIHETG 199
>gi|117921075|ref|YP_870267.1| histone deacetylase superfamily protein [Shewanella sp. ANA-3]
gi|117613407|gb|ABK48861.1| histone deacetylase superfamily [Shewanella sp. ANA-3]
Length = 300
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVHHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGRLACAALRRIG----FPWSEALVERTL-----HSVSGTSLTASLALQAG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDG 164
>gi|398986788|ref|ZP_10691706.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM24]
gi|399011733|ref|ZP_10714063.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM16]
gi|398117317|gb|EJM07069.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM16]
gi|398151664|gb|EJM40206.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM24]
Length = 306
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|416220187|ref|ZP_11625279.1| histone deacetylase family protein [Moraxella catarrhalis 103P14B1]
gi|326566775|gb|EGE16914.1| histone deacetylase family protein [Moraxella catarrhalis 103P14B1]
Length = 301
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|334134833|ref|ZP_08508335.1| histone deacetylase family [Paenibacillus sp. HGF7]
gi|333607677|gb|EGL18989.1| histone deacetylase family [Paenibacillus sp. HGF7]
Length = 392
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + L G L+ + IV P A+ ++LL VH +Y+ ++++ +S +E
Sbjct: 22 HPFNPKRLLLTIDLLRKAGALNDSEIVTPRVATDDELLRVHQPAYIDAVKALSELSPSLE 81
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV-----GGTILAAK--LAKERGWAINVGGGFHHCSAD 166
A + + + V GG+I AA ++ A ++GGG HH
Sbjct: 82 WVNSAAKYGLDTEDTPYFAWMHDVTSMVVGGSITAADTVMSGRAKRAFHLGGGLHHALQS 141
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
+G GFC Y D S I + N ++V+ ID D H G+G + F SD RV + G
Sbjct: 142 KGAGFCVYNDASAAIAHLTEHYN-AKVLYIDTDVHHGDGVQWSFYSDPRVCTFSIHETGK 200
Query: 227 Y 227
Y
Sbjct: 201 Y 201
>gi|171058674|ref|YP_001791023.1| histone deacetylase superfamily protein [Leptothrix cholodnii SP-6]
gi|170776119|gb|ACB34258.1| histone deacetylase superfamily [Leptothrix cholodnii SP-6]
Length = 318
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+V+ AS +L +VH +Y+ ++Q +S E + + +R R+ VG
Sbjct: 40 LVQAAAASDGELALVHEPAYVDAVQHG-RLSAQQEREIGFPWSPAMAERA-----RRSVG 93
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-----RV 193
TI AA+ A G + N+ GG HH SA G GFC + D+++ + + R+
Sbjct: 94 ATIAAARCALAEGISGNLAGGTHHASAGGGSGFCVFNDVAVAARLMQAEWHRRHRQFLRI 153
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+IDLD HQGNG F+ D VY L M +P
Sbjct: 154 AVIDLDVHQGNGTASIFADDPMVYTLSMHGEKNFP 188
>gi|416235331|ref|ZP_11630090.1| histone deacetylase family protein [Moraxella catarrhalis 12P80B1]
gi|326564372|gb|EGE14600.1| histone deacetylase family protein [Moraxella catarrhalis 12P80B1]
Length = 301
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|444432032|ref|ZP_21227192.1| putative acetoin utilization protein [Gordonia soli NBRC 108243]
gi|443887206|dbj|GAC68913.1| putative acetoin utilization protein [Gordonia soli NBRC 108243]
Length = 414
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G L+ P+ + DL+VVH+ Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMSLARSLGVLEGVETTPPMALTDTDLMVVHNREYIDAVRAVGSGNAALS 79
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKLAKERG--WAINVGGGFHHCSAD 166
P + LF V R VGG++ AA+ A+N+GGG HH
Sbjct: 80 GPLLERLFGLGGTDNPVFDGMHEAARLLVGGSVAAAEAIASGSVRRAVNIGGGMHHAMRS 139
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
GFC Y D S+ I Y ++ R+ ID+DAH G+G + +F++D RV + +
Sbjct: 140 HAAGFCVYNDCSIAIRY-LLEHGFDRIAYIDIDAHHGDGVQVEFAADPRVLTVSLHQ 195
>gi|440712560|ref|ZP_20893176.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SWK14]
gi|436442715|gb|ELP35826.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SWK14]
Length = 285
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLV 125
+ + SE D IV P A+ E LL H+ Y++ +QS E+ + FP
Sbjct: 10 RVVESEHHRDDTLIV-PQAATDEQLLHCHTPDYVRRVQSGTLTKQ--EIRRIG-FP---W 62
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
K++ R+ G TI AA+ A + G + N+ GG HH A EG G+C + D ++ I
Sbjct: 63 SAKMVERSRRSTGATISAARAALDEGISANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQ 122
Query: 186 VQLNISRVMIIDLDAHQGNG 205
+ I R IIDLD HQGNG
Sbjct: 123 SEGLIQRAAIIDLDVHQGNG 142
>gi|374340700|ref|YP_005097436.1| deacetylase [Marinitoga piezophila KA3]
gi|372102234|gb|AEX86138.1| deacetylase, histone deacetylase/acetoin utilization protein
[Marinitoga piezophila KA3]
Length = 300
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP S + + + L E L+ N ++ P A KE+L + H+ Y+KS++ N+ E
Sbjct: 19 HPLRSIRCKKGIERLKKEEDLEYN-LISPEYAEKEELALFHTLDYIKSIEE--NIGGSAE 75
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWAINVGGGFHHCSADEGGGFC 172
P + + P R VG T+ A + + ++N+ GG+HH + GFC
Sbjct: 76 TP----------VKNMYNPARLSVGATLTAINSITDDARISVNLCGGWHHAFENRARGFC 125
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
+ D+ + YA + S+VMIID D H G+G ++ F +D VY + +
Sbjct: 126 IFNDVVIGAKYA-QKKGFSKVMIIDWDVHHGDGTQRAFLNDDSVYTISI 173
>gi|348525428|ref|XP_003450224.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like
[Oreochromis niloticus]
Length = 345
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ Y + H F K+ R+ Q L + + + + P ASK+ L VH
Sbjct: 42 LPVVHHSKY---VCDLAPSHRFPMGKFPRVLQCLLRDQVITEKQVWVPEIASKDLLSCVH 98
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E YL + N I + FP ++ R + GGT+LAA++A +RG A
Sbjct: 99 TEDYLDNF---INGKISEQEQRRTGFP---WSEGIVRRCRYETGGTVLAAEVALQRGLAC 152
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDFSSD 213
+ GG HH G GFC D+++ Y R V+I+DLD HQG+G F +
Sbjct: 153 STAGGTHHAFPSYGSGFCLLNDLAVAAKYMMDNSPTKRKVLIVDLDVHQGDGTAFIFKEE 212
Query: 214 SRVYILDMFNPGIYP 228
V+ + +P
Sbjct: 213 PSVFTFSVHCGKNFP 227
>gi|296119939|ref|ZP_06838493.1| acetoin utilization protein AcuC [Corynebacterium ammoniagenes DSM
20306]
gi|295967093|gb|EFG80364.1| acetoin utilization protein AcuC [Corynebacterium ammoniagenes DSM
20306]
Length = 372
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNV 108
+ K HP + G +D + P A+ E L +VHS Y+++ + PN+
Sbjct: 16 LGKGHPMGPDRVDSALDLARRLGIIDAFTVETPAAAADEILELVHSSEYIQATRIHRPNL 75
Query: 109 --SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA----KERGWAINVGGGFHH 162
I E PVA + + R GGT+ A + +R A+N+ GG HH
Sbjct: 76 RFGIGTEDNPVAPGLSDVAARIS--------GGTLDAVRAVWDGKAQR--AVNLAGGLHH 125
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D GFC Y D ++ I + RV ID DAH G+G EK F +D RV + +
Sbjct: 126 AFPDSMAGFCMYNDAAIAITWLLNNTEAQRVAYIDFDAHHGDGVEKIFWNDPRVLTISIH 185
Query: 223 NPGIY 227
G+Y
Sbjct: 186 ESGLY 190
>gi|359451303|ref|ZP_09240710.1| hypothetical protein P20480_3448 [Pseudoalteromonas sp. BSi20480]
gi|358042944|dbj|GAA76959.1| hypothetical protein P20480_3448 [Pseudoalteromonas sp. BSi20480]
Length = 302
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYAHVKKLGLIGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFTTQTLINSGEVTNVLIFDLDVHQGDG 167
>gi|416254189|ref|ZP_11638623.1| histone deacetylase family protein [Moraxella catarrhalis O35E]
gi|326577638|gb|EGE27515.1| histone deacetylase family protein [Moraxella catarrhalis O35E]
Length = 301
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|84393623|ref|ZP_00992375.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
12B01]
gi|84375764|gb|EAP92659.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
12B01]
Length = 326
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNCI-------VEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D++ + +P
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDRDPLWKSQFEMFQPTPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA++A E G I++ GG+HH D G GFC D+ L +A +I +V+I+D
Sbjct: 102 GGTCLAAEMAIESGLTIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVD 161
Query: 198 LDAHQGNG 205
D H G+G
Sbjct: 162 SDVHHGDG 169
>gi|257060373|ref|YP_003138261.1| histone deacetylase [Cyanothece sp. PCC 8802]
gi|256590539|gb|ACV01426.1| Histone deacetylase [Cyanothece sp. PCC 8802]
Length = 305
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y I H F K+ + + L S+ + I P + +VH+
Sbjct: 4 PIVYHPQY---VAPIPDEHRFPMLKFRLLYELLLSDSIAEPKNIYTPEFPELGLIELVHT 60
Query: 96 ESYLKSL-QSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y+ + Q + +V I +P + LVQR ++ VGGTIL AKLA + G
Sbjct: 61 AEYINAYCQGTLDVKSQRRIGLP----WSQELVQRTLI-----AVGGTILTAKLALQYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH + G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 112 ASNTAGGTHHAFPNYGSGFCIFNDLAIASR-VLQQLGLVKKVLIVDLDVHQGDGTAVIFE 170
Query: 212 SDSRVYILDMFNPGIYP 228
+D V+ + +P
Sbjct: 171 NDPTVFTFSLHCESNFP 187
>gi|387814828|ref|YP_005430315.1| hypothetical protein MARHY2424 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381339845|emb|CCG95892.1| conserved hypothetical protein [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 308
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ + V P E +++ LL VH ESYL L P +
Sbjct: 20 HPESPERLSSILAYLADTNLQQELDWVRPEEITRDQLLTVHPESYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L K+ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAAKLAAGGNVQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +I+L A ++ RV I+D D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNIALAAMRALTFHHLERVAIVDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSHV 196
Query: 233 ARR 235
R+
Sbjct: 197 HRQ 199
>gi|346643249|ref|YP_262471.2| histone deacetylase [Pseudomonas protegens Pf-5]
gi|341580402|gb|AAY94613.2| histone deacetylase family protein [Pseudomonas protegens Pf-5]
Length = 306
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDG 164
>gi|416155844|ref|ZP_11604137.1| histone deacetylase family protein [Moraxella catarrhalis 101P30B1]
gi|416217146|ref|ZP_11624095.1| histone deacetylase family protein [Moraxella catarrhalis 7169]
gi|416239194|ref|ZP_11631744.1| histone deacetylase family protein [Moraxella catarrhalis BC1]
gi|416250103|ref|ZP_11637112.1| histone deacetylase family protein [Moraxella catarrhalis CO72]
gi|326560997|gb|EGE11362.1| histone deacetylase family protein [Moraxella catarrhalis 7169]
gi|326567382|gb|EGE17497.1| histone deacetylase family protein [Moraxella catarrhalis BC1]
gi|326575226|gb|EGE25154.1| histone deacetylase family protein [Moraxella catarrhalis CO72]
gi|326576687|gb|EGE26594.1| histone deacetylase family protein [Moraxella catarrhalis 101P30B1]
Length = 301
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|416228420|ref|ZP_11627574.1| histone deacetylase family protein [Moraxella catarrhalis 46P47B1]
gi|326563755|gb|EGE14006.1| histone deacetylase family protein [Moraxella catarrhalis 46P47B1]
Length = 301
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP 186
>gi|218248300|ref|YP_002373671.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 8801]
gi|218168778|gb|ACK67515.1| histone deacetylase superfamily [Cyanothece sp. PCC 8801]
Length = 305
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y I H F K+ + + L S+ + I P + +VH+
Sbjct: 4 PIVYHPQY---VAPIPDEHRFPMLKFRLLYELLLSDSIAEPKNIYTPEFPELGLIELVHT 60
Query: 96 ESYLKSL-QSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y+ + Q + +V I +P + LVQR ++ VGGTIL AKLA + G
Sbjct: 61 AEYINAYCQGTLDVKSQRRIGLP----WSQELVQRTLI-----AVGGTILTAKLALQYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH + G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 112 ASNTAGGTHHAFPNYGSGFCIFNDLAIASR-VLQQLGLVKKVLIVDLDVHQGDGTAVIFE 170
Query: 212 SDSRVYILDMFNPGIYP 228
+D V+ + +P
Sbjct: 171 NDPTVFTFSLHCESNFP 187
>gi|449018659|dbj|BAM82061.1| unknown deacetylase [Cyanidioschyzon merolae strain 10D]
Length = 369
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F +K+ + + L ++ F +V PL A +D+L+VHS+ Y+ I
Sbjct: 64 HRFPMAKYELVRRKLEADSSFKGVPFLVSPL-AELDDILLVHSKDYVDRFIKGKLSDI-- 120
Query: 113 EVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGG 169
EV + + LVQR + VGGT+ + + A + GG HH D G
Sbjct: 121 EVRRIGFPWSTALVQRTL-----ASVGGTVACMRDVVEGRSRCAAQIAGGTHHAFPDHGE 175
Query: 170 GFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC + DI++ A + R++++DLD HQGNG F DSRV+ G YP
Sbjct: 176 GFCVFNDIAIAARVALRDYAQVRRILVLDLDVHQGNGVAAIFQGDSRVFTCSFHGHGNYP 235
>gi|260060958|ref|YP_003194038.1| Histone deacetylase superfamily protein [Robiginitalea biformata
HTCC2501]
gi|88785090|gb|EAR16259.1| Histone deacetylase superfamily protein [Robiginitalea biformata
HTCC2501]
Length = 300
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + P ++L H +Y + LQ+
Sbjct: 18 HRFPMQKYELLPQQLLHEGTAEHENFFTPGLPEDSEILRAHDAAYFEDLQTG-------R 70
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP + RKV +P+ R GTI A E G ++N+ GG HH
Sbjct: 71 IPPREM-------RKVGFPWSEALVLRERTIAQGTIRCCHYALENGVSMNIAGGTHHAYR 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ + R++++DLD HQGNG F + RV+ M
Sbjct: 124 DRGEAFCMLNDQAIGACHLLANNLAERILMLDLDVHQGNGTAAIFREEPRVFTYSMHGQS 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|120555414|ref|YP_959765.1| histone deacetylase superfamily protein [Marinobacter aquaeolei
VT8]
gi|120325263|gb|ABM19578.1| histone deacetylase superfamily [Marinobacter aquaeolei VT8]
Length = 308
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ + V P E +++ LL VH ESYL L P +
Sbjct: 20 HPESPERLSSILAYLADTNLQQELDWVRPEEITRDQLLTVHPESYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L K+ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAAKLAAGGNVQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +I+L A ++ RV I+D D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNIALAAMRALTFHHLERVAIVDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSHV 196
Query: 233 ARR 235
R+
Sbjct: 197 HRQ 199
>gi|432891572|ref|XP_004075590.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like [Oryzias
latipes]
Length = 341
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y + H F K+ R+ FL + + + + P AS++ L VH
Sbjct: 38 LPIIHHSKY---VCELPANHRFPMGKFPRVLHFLLKDQVITEKQVWVPEIASRDLLSCVH 94
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
+E YL S QR+ +P+ R + GGT+LAA+
Sbjct: 95 TEDYLNKFLSGKTSE--------------QEQRRTGFPWSEGIVSRCRYETGGTVLAAEA 140
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNG 205
A +RG A + GG HH G GFC D+++ Y R ++I+DLD HQG+G
Sbjct: 141 ALQRGLACSTAGGTHHAFPGYGSGFCLLNDLAVAAKYLKEDCPTKRKILIVDLDVHQGDG 200
Query: 206 HEKDFSSDSRVYILDMFNPGIYP 228
F + V+ + +P
Sbjct: 201 TAFIFKEEPAVFTFSVHCGKNFP 223
>gi|421873504|ref|ZP_16305117.1| acetoin utilization protein AcuC [Brevibacillus laterosporus GI-9]
gi|372457566|emb|CCF14666.1| acetoin utilization protein AcuC [Brevibacillus laterosporus GI-9]
Length = 395
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYS DY F E HPF+ + + + G L I+ P A+ E+LL+VH
Sbjct: 18 LIYSADYTKYFFHEE--HPFNQKRLLLTYDLMQAYGLLTPENIIAPRYATDEELLLVHDP 75
Query: 97 SYL---KSLQSSPN-----VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA- 147
YL K + P S + V +F N ++ VGG+I A +
Sbjct: 76 RYLEIVKRQGTQPEELPLAASYGLGTEDVPIFANMHEATSLI------VGGSISAVDIVM 129
Query: 148 -KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + N GG HH GFC Y D S+ I Y + +RV+ ID DAH G+G
Sbjct: 130 NGQAEHSFNPAGGLHHAFRGRASGFCIYNDCSVAIAYIRKHWD-ARVLYIDTDAHHGDGV 188
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 189 QWAFYDDPNVMTISLHETGKY 209
>gi|440683109|ref|YP_007157904.1| Histone deacetylase [Anabaena cylindrica PCC 7122]
gi|428680228|gb|AFZ58994.1| Histone deacetylase [Anabaena cylindrica PCC 7122]
Length = 305
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y DY I+ L + H F SK+ ++ + L ++ P E + +VH
Sbjct: 3 LPIVYHLDY-IAPLPLG--HRFPMSKFSQLHELLLADRVAHSEQFHIPERPQTELIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ +Y++ +L+S I + P + C+ +GGTIL A+LA
Sbjct: 60 TPNYVQAYCQGTLESKAQRRIGLPWSPALVNRTCVA-----------LGGTILTAQLALN 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEK 208
G A N GG HH D G GFC + D+++ +L +++ ++I+DLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPDYGSGFCIFNDLAVASR-VIQKLGLAKNILIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F +D+ V+ M +P
Sbjct: 168 IFHNDNSVFTFSMHCEDNFP 187
>gi|398885389|ref|ZP_10640302.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
gi|398192581|gb|EJM79728.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
Length = 306
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|440751264|ref|ZP_20930498.1| Putative histone deacetylase/AcuC/AphA family protein [Mariniradius
saccharolyticus AK6]
gi|436480128|gb|ELP36385.1| Putative histone deacetylase/AcuC/AphA family protein [Mariniradius
saccharolyticus AK6]
Length = 279
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+ + + L EG + + +P + + H +YL+ L+ N+S+
Sbjct: 3 KYDLLPEQLLYEGTVKEENFFQPAKLDDRWIKNTHCSTYLEKLR---NLSLSKSEIRKTG 59
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP LV+R+V + G++ A+ A E G +N+ GG HH A+ G GFC DI
Sbjct: 60 FPLSQQLVEREV-----HIMAGSVQASLYALEHGIGMNIAGGTHHAYAERGEGFCLLNDI 114
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
++ +Y ++V+ +DLD HQGNG K F ++ V+ M YP E
Sbjct: 115 AISANYLLDNALANKVLAVDLDVHQGNGTAKLFEENTSVFTFSMHGAANYPMHKE 169
>gi|339007493|ref|ZP_08640068.1| acetoin utilization protein AcuC [Brevibacillus laterosporus LMG
15441]
gi|338776702|gb|EGP36230.1| acetoin utilization protein AcuC [Brevibacillus laterosporus LMG
15441]
Length = 384
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYS DY F E HPF+ + + + G L I+ P A+ E+LL+VH
Sbjct: 7 LIYSADYTKYFFHEE--HPFNQKRLLLTYDLMQAYGLLTPENIIAPRYATDEELLLVHDP 64
Query: 97 SYL---KSLQSSPN-----VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA- 147
S+L K + P S + V +F N ++ VGG+I A +
Sbjct: 65 SFLEIVKRQGTQPEELPLAASYGLGTEDVPIFANMHEATSLI------VGGSISAVDIVM 118
Query: 148 -KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + N GG HH GFC Y D S+ I Y + +RV+ ID DAH G+G
Sbjct: 119 NGQAEHSFNPAGGLHHAFRGRASGFCIYNDCSVAIAYIRKHWD-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 178 QWAFYDDPNVMTISLHETGKY 198
>gi|218708941|ref|YP_002416562.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
LGP32]
gi|218321960|emb|CAV17960.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
LGP32]
Length = 306
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 37/187 (19%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNC-------IVEPLEAS 86
PLIY P Y S L + + H + +K+ Q L S E +D + + +P+ S
Sbjct: 3 PLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPKWGNAFEMFQPMPVS 56
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH Y+ L S +P + R++ +P+ +Q+ G
Sbjct: 57 VEQVKQVHDGEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSG 102
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT LAA++A E G AI++ GG+HH D G GFC D+ L +A +I +V+I+D
Sbjct: 103 GTCLAAEMAIESGLAIHLSGGYHHAHRDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDS 162
Query: 199 DAHQGNG 205
D H G+G
Sbjct: 163 DVHHGDG 169
>gi|398905223|ref|ZP_10652679.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
gi|398174733|gb|EJM62519.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
Length = 329
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 26 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLARDTDLLRPDLCPPEILALAH 82
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 83 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 133
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 134 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 187
>gi|152996916|ref|YP_001341751.1| histone deacetylase superfamily protein [Marinomonas sp. MWYL1]
gi|150837840|gb|ABR71816.1| histone deacetylase superfamily [Marinomonas sp. MWYL1]
Length = 308
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL++ P+Y I F H F K+G + + L +G L P S + L+ H
Sbjct: 6 LPLVFHPNYSIPF---PAGHRFPMRKFGLLAESLREQGILTDENEYTPAPLSLKVLMAAH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ + S I +P + LV+R + + V GT+L +LA E G
Sbjct: 63 HKEYVQRFIRGELSKREEKEIGLP----WSEWLVERTL-----RAVSGTMLTTELAFEHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH G GFC + D+++ +++I+D D HQG+G
Sbjct: 114 LACHLAGGTHHAHPSHGSGFCIFNDLAVAALAMIGSGRAKKILILDCDVHQGDG 167
>gi|56421344|ref|YP_148662.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|297529033|ref|YP_003670308.1| histone deacetylase [Geobacillus sp. C56-T3]
gi|448239088|ref|YP_007403146.1| acetoin utilization protein [Geobacillus sp. GHH01]
gi|56381186|dbj|BAD77094.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|297252285|gb|ADI25731.1| Histone deacetylase [Geobacillus sp. C56-T3]
gi|445207930|gb|AGE23395.1| acetoin utilization protein [Geobacillus sp. GHH01]
Length = 389
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + L + G L+ IV P A+ ++L ++H SY+++++++
Sbjct: 22 HPFNQLRVKMTYDLLCTLGALEDRQIVAPRMATDDELALIHDRSYIEAVKAAGRGELSEA 81
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A A L+ A+N+GGG H
Sbjct: 82 AAQNYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDAVLSGAAEHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIQYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|392538515|ref|ZP_10285652.1| histone deacetylase [Pseudoalteromonas marina mano4]
Length = 302
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYAHVKKLGLVGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFTTQTLINSGEVTNVLIFDLDVHQGDG 167
>gi|398858263|ref|ZP_10613955.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
gi|398239575|gb|EJN25282.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
Length = 306
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDTDLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|307154340|ref|YP_003889724.1| histone deacetylase [Cyanothece sp. PCC 7822]
gi|306984568|gb|ADN16449.1| Histone deacetylase [Cyanothece sp. PCC 7822]
Length = 303
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y P+Y + H F K+ + L ++G P ++E + +VH
Sbjct: 2 IPIVYHPNY---VTPLPDGHRFPMPKFKLLYDLLITDGITTPEHTHIPEVPAREIIELVH 58
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ P I +P + LV R V GTIL A+LA + G
Sbjct: 59 TPEYVQAYYGGTLDPKAQRRIGLP----WSPGLVTRTC-----TAVAGTILTAQLALKYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +V+IIDLD HQG+G F
Sbjct: 110 LACNTAGGTHHAFPSFGSGFCIFNDLAIATRRLQQLELVKKVLIIDLDVHQGDGTAYIFQ 169
Query: 212 SDSRVYILDMFNPGIYP 228
+D V+ M +P
Sbjct: 170 NDESVFTFSMHCEANFP 186
>gi|255531938|ref|YP_003092310.1| histone deacetylase [Pedobacter heparinus DSM 2366]
gi|255344922|gb|ACU04248.1| Histone deacetylase [Pedobacter heparinus DSM 2366]
Length = 299
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I L EG + + EP +E +L H ++Y + L+S +
Sbjct: 18 HRFPMIKYELIPGQLLHEGLISAANLFEPGLLEEEVVLYAHQKAYWEQLKS-------LS 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+P QR++ +P Q+ GT+ + A + G A NV GG HH +
Sbjct: 71 LPARE-------QRRIGFPLTAQLLEREIRIAKGTVDGSGYALQYGIAFNVAGGTHHAGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G GFC D ++ +Y ++IIDLD HQGNG + F ++ RV+ M
Sbjct: 124 NWGEGFCLLNDQAIAANYLLNNGLAKHILIIDLDVHQGNGTAEIFENEPRVFTFSMHGDK 183
Query: 226 IYP 228
+P
Sbjct: 184 NFP 186
>gi|398896408|ref|ZP_10647537.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM55]
gi|398178668|gb|EJM66313.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM55]
Length = 306
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPDLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY++ S S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHDPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|403237820|ref|ZP_10916406.1| Histone deacetylase, involved in acetoin utilization [Bacillus sp.
10403023]
Length = 384
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP------- 106
HPF+ ++ L S LD + I+ P AS E+L +VH ++++++ +
Sbjct: 22 HPFNQTRVKLTYDLLKSLNLLDDSDIIPPRIASDEELQLVHDPRFIEAVKLAGEGKLPEE 81
Query: 107 ---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N I E P+ FP +L VG T+ A ++ + A+N+GGG H
Sbjct: 82 IGHNYGIGTEDTPI--FPGMHEASALL------VGATLSAVDHVMSGKSKHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + N+ RV+ +D DAH G+G + F D V L +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIRYMQKKYNV-RVLYVDTDAHHGDGVQWTFYDDPDVCTLSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|398964631|ref|ZP_10680408.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM30]
gi|398148017|gb|EJM36705.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM30]
Length = 306
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRRYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|403070424|ref|ZP_10911756.1| acetoin utilization protein [Oceanobacillus sp. Ndiop]
Length = 383
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++S D+ I E HPF+ + + L + L I+ P A++E++ + H
Sbjct: 7 FVFSDDFLIYHFNEE--HPFNQKRVLLAKELLEASAMLYAQDIIPPRMATEEEIGLFHDR 64
Query: 97 SYLKSLQSSPNVS--------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
+Y+ +++ + ++S + E P+ FPN VGGT+ A L
Sbjct: 65 AYINAVKQADSLSEDEAYEYGLGTEDTPI--FPNMHEASSF------AVGGTLTAVDEVL 116
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
R A+N+GGG HH + GFC Y D ++ I Y + N+ +V+ +D DAH G+G
Sbjct: 117 TGRRDHALNLGGGLHHALQRKAAGFCIYNDCAIAIKYIREKYNL-KVLYVDTDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V + G Y
Sbjct: 176 QWAFYDDPNVCTFSIHETGRY 196
>gi|398837941|ref|ZP_10595225.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
gi|398117499|gb|EJM07250.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
Length = 306
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLARDTDLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|375009930|ref|YP_004983563.1| acetoin utilization protein AcuC [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359288779|gb|AEV20463.1| Acetoin utilization protein AcuC [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 388
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + L + G L+ IV P A+ ++L ++H SY+++++++
Sbjct: 22 HPFNQLRVKMTYDLLCTLGALEDRQIVAPRMATDDELALIHDRSYIEAVKAAGRGELSEA 81
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A A L+ A+N+GGG H
Sbjct: 82 AAQNYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDAVLSGAAEHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIQYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|261418179|ref|YP_003251861.1| histone deacetylase [Geobacillus sp. Y412MC61]
gi|319767861|ref|YP_004133362.1| histone deacetylase [Geobacillus sp. Y412MC52]
gi|261374636|gb|ACX77379.1| Histone deacetylase [Geobacillus sp. Y412MC61]
gi|317112727|gb|ADU95219.1| Histone deacetylase [Geobacillus sp. Y412MC52]
Length = 389
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + L + G L+ IV P A+ ++L ++H SY+++++++
Sbjct: 22 HPFNQLRVKMTYDLLCTLGALEDRQIVAPRMATDDELALIHDRSYIEAVKAAGRGELSEA 81
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A A L+ A+N+GGG H
Sbjct: 82 AAQNYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDAVLSGAAEHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIQYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|424925046|ref|ZP_18348407.1| Deacetylase [Pseudomonas fluorescens R124]
gi|404306206|gb|EJZ60168.1| Deacetylase [Pseudomonas fluorescens R124]
Length = 306
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRRYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDG 164
>gi|340788226|ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331]
gi|340553493|gb|AEK62868.1| Deacetylase [Collimonas fungivorans Ter331]
Length = 311
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 125 VQRKVLYPF--------RKQVGGTILA--AKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
VQ+ + +P+ R+ G TI A A L A+N+ GG HH AD+G GFC +
Sbjct: 72 VQKAIGFPWTPQMVERSRRSAGATIAACRAALTDPGRIAVNLAGGTHHAFADQGAGFCVF 131
Query: 175 ADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
D ++ + + RV I+DLD HQGNG ++D V+ L + YP D E
Sbjct: 132 NDAAIAARLMQAERRVQRVAIVDLDVHQGNGTASILANDDSVFTLSLHGERNYPFDKE 189
>gi|432921060|ref|XP_004080033.1| PREDICTED: histone deacetylase 8-like [Oryzias latipes]
Length = 394
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + G LD V+P A+ E++ H++SYL+ L S + + L +C
Sbjct: 41 LIEAYGLLDHMSTVKPRVATMEEMSKFHTDSYLEHLHKISQDGDNDDPQSADFGLGYDCP 100
Query: 125 VQRKVLYPFRKQVGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
V + Y + VGG L A L ++ AIN GG+HH DE GFC D L I
Sbjct: 101 VTEGI-YDYAASVGGATLTAAQCLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI 159
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ RV+ +D+D H G+G E+ FS S+V + + F+PG +P
Sbjct: 160 --LKLREKYERVLYVDVDLHHGDGVEEAFSFTSKVMTVSLHKFSPGFFP 206
>gi|330814278|ref|YP_004358517.1| histone deacetylase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487373|gb|AEA81778.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
IMCC9063]
Length = 260
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DL H Y++ + N+S+ E FP ++ Y GGT+L+AKLA
Sbjct: 11 DLAKAHQPEYIQKID---NLSLSKEEERKLGFPMVPSVKRRSY---MATGGTVLSAKLAL 64
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A N GG HH +D G G+C + D+++ + + ++ +++I DLD HQG+G K
Sbjct: 65 SYKLACNTAGGSHHAFSDSGNGYCVFNDVAVAAYNLLNKHSVKKILIYDLDVHQGDGTAK 124
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F ++ +VY + YP
Sbjct: 125 IFENNDQVYTFSAHSKKNYP 144
>gi|443673298|ref|ZP_21138366.1| Acetoin dehydrogenase [Rhodococcus sp. AW25M09]
gi|443414113|emb|CCQ16704.1| Acetoin dehydrogenase [Rhodococcus sp. AW25M09]
Length = 422
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + ++ + G L+ +VEP A +LL H+ +Y+++++ +P +
Sbjct: 35 HPMNPTRLDLTMALATEIGVLEGVELVEPAAAPDSELLRFHTPAYIEAVKRAPAQGPALR 94
Query: 114 VP------------PVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGW-AINVGGG 159
P PV FP+ +L GG++ AA+ +A R A+++GGG
Sbjct: 95 DPDDVVHGLGSDDNPV--FPHMHEASAML------AGGSLAAAREIASGRARRAVSIGGG 146
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH AD GFC Y D ++ I + + R+ ID+DAH G+G + F D RV +
Sbjct: 147 MHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYIDVDAHHGDGVQAAFLGDPRVLTV 205
Query: 220 DM 221
+
Sbjct: 206 SL 207
>gi|398954423|ref|ZP_10675959.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
gi|398152442|gb|EJM40961.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
Length = 308
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 5 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDVDLLRPDLCPADILALAH 61
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 62 DPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQAMEHG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 113 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 166
>gi|386346229|ref|YP_006044478.1| histone deacetylase superfamily protein [Spirochaeta thermophila
DSM 6578]
gi|339411196|gb|AEJ60761.1| histone deacetylase superfamily [Spirochaeta thermophila DSM 6578]
Length = 336
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV----EPLEASKEDLLV 92
LI+ P ++SF L P D + ++ L+ G +D +V EPL +EDLL
Sbjct: 7 LIFRPAVEVSFEEFGILIPIDDDRTAQVLASLAHAG-VDTGRLVRVVEEPL-IGREDLLR 64
Query: 93 VHSESYLKSLQSSPNVSIIIEV--------------PPVALFPNCLVQRKVLYPFRKQVG 138
VH+ SY++ L SS ++E P A P + +VL
Sbjct: 65 VHTPSYVEDLFSSGLERRLLEAYELVDERGGYVRYDPARARRPLSELLDRVLL----GAS 120
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
T LA A E G+A + GG+HH A G GFC D+ + + + I R ++D+
Sbjct: 121 CTYLACLRALEAGYAFSCAGGYHHAHASFGHGFCVINDVVIALRRLVAEGRIERAWVVDV 180
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
DAH+G+G D + L + G +P
Sbjct: 181 DAHKGDGTAALTQDDPSIATLSIHMAGGWP 210
>gi|188579954|ref|YP_001923399.1| histone deacetylase superfamily protein [Methylobacterium populi
BJ001]
gi|179343452|gb|ACB78864.1| histone deacetylase superfamily [Methylobacterium populi BJ001]
Length = 294
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFL-DKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVS 109
H F K+GR+ + L + G + D + EP +A+ L H +Y+ ++ Q +
Sbjct: 14 HRFPMRKYGRLAETLRARGLVPDGFVMPEPADAAL--LSGAHDPAYVAAVLAAQVPRAIE 71
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
I +P V V R GGT+ AA+LA G A + GG HH G
Sbjct: 72 RAIGLP---------VTESVAARSRASAGGTLRAARLALGHGLAGSTAGGSHHARRAGGA 122
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC + D+++ + I R +IIDLD HQG+G + + ++ L + YP
Sbjct: 123 GFCVFNDVAVAALALRREGAIGRALIIDLDVHQGDGTADCLAREPELFTLSIHCERNYPH 182
Query: 230 D 230
D
Sbjct: 183 D 183
>gi|148980163|ref|ZP_01815914.1| deacetylase [Vibrionales bacterium SWAT-3]
gi|145961381|gb|EDK26688.1| deacetylase [Vibrionales bacterium SWAT-3]
Length = 306
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLD-----KNC--IVEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D KN + EP
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPLWKNMFEVFEPKPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSDYVDLLVSG-------SLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA +A E G AI++ GG+HH D G GFC D+ L +A + +V+I+D
Sbjct: 102 GGTCLAADMAIESGLAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEQVDKVLIVD 161
Query: 198 LDAHQGNG 205
D H G+G
Sbjct: 162 SDVHHGDG 169
>gi|358448844|ref|ZP_09159339.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
gi|385330960|ref|YP_005884911.1| histone deacetylase/AcuC/AphA family protein [Marinobacter
adhaerens HP15]
gi|311694110|gb|ADP96983.1| histone deacetylase/AcuC/AphA family protein [Marinobacter
adhaerens HP15]
gi|357226994|gb|EHJ05464.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
Length = 308
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ G K V P E +++ LL+VH E YL L P +
Sbjct: 20 HPESPERLAAIISYLADTGLDQKLDWVRPEEITRDQLLMVHPEKYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L ++ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAARLAAGANIQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +++L A ++ RV IID D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNVALAAMRALTFHHLERVAIIDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSHV 196
Query: 233 ARR 235
R+
Sbjct: 197 HRQ 199
>gi|433443624|ref|ZP_20408924.1| histone deacetylase, involved in acetoin utilization [Anoxybacillus
flavithermus TNO-09.006]
gi|432002018|gb|ELK22880.1| histone deacetylase, involved in acetoin utilization [Anoxybacillus
flavithermus TNO-09.006]
Length = 390
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + L + G L + IV P A+ E+L +VH Y+++++ + + E
Sbjct: 22 HPFNQLRVKLTYDLLQTLGALHDSQIVAPRLATDEELALVHDTDYIEAVKKAGRGQLPEE 81
Query: 114 VP--------PVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
V +FPN +L VGGT+ A L+ + A+++GGG HH
Sbjct: 82 VALNYGLGTEDTPIFPNMHEASALL------VGGTLTAVDYVLSGKAEHALSLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 136 FRGKASGFCIYNDSSVAIKYMQEKYGV-RVLYVDTDAHHGDGVQWTFYDDPNVCTFSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|319792622|ref|YP_004154262.1| histone deacetylase [Variovorax paradoxus EPS]
gi|315595085|gb|ADU36151.1| Histone deacetylase [Variovorax paradoxus EPS]
Length = 311
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 84 EASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
AS +L + H+ ++ ++ SP I P + +V+R R+ G T
Sbjct: 48 RASDGELALAHTPQWIAAINDGSVSPQAMREIGFP----WSEAMVERS-----RRSTGAT 98
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----RVMII 196
I A + A G A N+ GG HH AD+GGGFC + D ++ + + +V +I
Sbjct: 99 IAACRAAFAGGIAANMAGGTHHAYADKGGGFCVFNDAAVAARLMQAEHGRTGRLLKVAVI 158
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
DLD HQGNG F +D V+ L M +P EA
Sbjct: 159 DLDVHQGNGTASIFRNDPSVFTLSMHGQKNFPFRKEA 195
>gi|17540334|ref|NP_500788.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
gi|351063051|emb|CCD71098.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
Length = 863
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 428 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 486
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 487 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 546
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 547 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 606
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY 231
+ F DS V + + F P P+DY
Sbjct: 607 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 637
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNV---- 108
HP S + +I + L+ L+K ++ LE DL V H +S +K L S
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 109 --SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
S + V + N + K + + I+A + + G+A+ G HH +
Sbjct: 94 INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHADSV 150
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 199
>gi|423687680|ref|ZP_17662483.1| deacetylase [Vibrio fischeri SR5]
gi|371493463|gb|EHN69066.1| deacetylase [Vibrio fischeri SR5]
Length = 298
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDEVYRCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L+ R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIGRTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G AI++ GG+HH D G GFC D+ + H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLVIAAHHGLSKDSIDKVLIIDSDVHHGDG 164
>gi|219848505|ref|YP_002462938.1| histone deacetylase superfamily protein [Chloroflexus aggregans DSM
9485]
gi|219542764|gb|ACL24502.1| histone deacetylase superfamily [Chloroflexus aggregans DSM 9485]
Length = 299
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + +E + + + P AS ++L+ VH+ +Y++ + + I
Sbjct: 17 HRFPMEKYALLRERVIAENIVSLDRLHVPEPASVDELVRVHTPAYIERVMTGRLTGAEIR 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
P +V+R R+ G TI A ++A + G +N+ GG HH AD G G+C
Sbjct: 77 RIGFPWSPQ-MVERS-----RRSAGATIAACRVALQEGVGVNLAGGTHHAFADAGAGYCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D ++ + + ++ IID D HQG+G F+ D V+ + +P
Sbjct: 131 FNDAAVAARAMQAEGRVRQIAIIDCDVHQGDGTAAIFADDPTVFTFSIHGAHNFP 185
>gi|120437426|ref|YP_863112.1| histone deacetylase [Gramella forsetii KT0803]
gi|117579576|emb|CAL68045.1| histone deacetylase family protein [Gramella forsetii KT0803]
Length = 300
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + +P + +L VH Y+K L+ N+ + +
Sbjct: 18 HRFPMEKYDLLPKQLLHEGTCNDENFFKPEFPEESHILNVHDPEYVKRLK---NLDLSKK 74
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
V+ FP L Q V R+Q+ GTI A A + G A+N+ GG HH + F
Sbjct: 75 EIRVSGFP--LSQELV---NREQIIANGTIKACDYALKNGIAMNIAGGTHHAFTNRAEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C D ++ Y + ++++IDLD HQGNG + F +D+ V+ M G YP
Sbjct: 130 CLLNDQAIGARYLQEKGLAKKILMIDLDVHQGNGTAEIFKNDASVFTFSMHGKGNYP 186
>gi|377567677|ref|ZP_09796885.1| putative acetoin utilization protein [Gordonia terrae NBRC 100016]
gi|377535217|dbj|GAB42050.1| putative acetoin utilization protein [Gordonia terrae NBRC 100016]
Length = 414
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD V P + L VVHS Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDVETVPPQAIDDDALTVVHSRDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF V R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDADNPVFTGMHEAARLLVGGTLAAAQTVVSGAATR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I Y + R+ ID+DAH G+G + +F++D RV + +
Sbjct: 138 RSRAAGFCIYNDCAIAIKY-LLDNGFDRIAYIDVDAHHGDGVQVEFATDPRVMTVSL 193
>gi|426411628|ref|YP_007031727.1| histone deacetylase superfamily protein [Pseudomonas sp. UW4]
gi|426269845|gb|AFY21922.1| histone deacetylase superfamily protein [Pseudomonas sp. UW4]
Length = 306
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMEKFRLLRDHLVDSGLTRDADLLRPDLCPADILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SY+ S ++S + + L +R V + VGG++LAA+ A E G A
Sbjct: 60 DPSYIDRYMSG-DLSREDQRRLGLPWTEALARRTV-----RAVGGSLLAAEQALEHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G
Sbjct: 114 HLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDG 164
>gi|340357467|ref|ZP_08680082.1| acetoin utilization protein AcuC [Sporosarcina newyorkensis 2681]
gi|339617531|gb|EGQ22154.1| acetoin utilization protein AcuC [Sporosarcina newyorkensis 2681]
Length = 384
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 37 LIYSPD---YDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
I+SPD Y+ S + HPF+ + L + + IV P A+ E+LL+
Sbjct: 7 FIFSPDQLNYEFS-----ETHPFNQKRIILTKDLLEEMHAIQPDEIVVPRSATDEELLLA 61
Query: 94 HSESYLKSLQS------SPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
H Y++ ++ S N+ I I FPN +L VGGT+ A +
Sbjct: 62 HDAKYIEIVKKASKGEVSENIGSIYGIGTEDTPFFPNMHEASALL------VGGTLTAIE 115
Query: 146 LAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
E +A+N+GGG HH + GFC Y D S+ I Y + +RV+ +D DAH G
Sbjct: 116 EVMEGRSRYALNLGGGLHHGFQGKASGFCIYNDSSVAIKYLQEKYG-ARVLYVDTDAHHG 174
Query: 204 NGHEKDFSSDSRVYILDMFNPGIY 227
+G + F D V + G Y
Sbjct: 175 DGVQWTFYDDPSVCTFSIHETGRY 198
>gi|149203338|ref|ZP_01880308.1| acetoin utilization protein AcuC [Roseovarius sp. TM1035]
gi|149143171|gb|EDM31210.1| acetoin utilization protein AcuC [Roseovarius sp. TM1035]
Length = 371
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+L + A + L HS +Y+ +LQ++ + +
Sbjct: 21 HPLSIPRVPTVIDLCRALGWLPPSQYRISPRAKPQALTAWHSPAYIAALQAAETLGQV-- 78
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
P + ++P FR+ GG++LA +L G A N GGG HH AD
Sbjct: 79 SPEIRARHQIGTLSNPVFPEMFRRPATAAGGSLLATELLAHGGVAYNPGGGTHHGMADHA 138
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GGFC D L I AF+ +SR+ +D+DAH +G F D RV ++ G +P
Sbjct: 139 GGFCYLNDPVLAIK-AFLAQGLSRIAYVDIDAHHCDGVAAAFHGDPRVLMISTHEAGRWP 197
>gi|291006939|ref|ZP_06564912.1| acetoin dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
Length = 385
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D S LG + HP + + S G LD +++P A EDL VH YL
Sbjct: 3 WDDSVLGYDLGGQHPLHPVRLDLTMRLARSLGLLDDVEVLKPSPADDEDLERVHRPEYLS 62
Query: 101 SLQSSP----NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+++S+P +V + +F ++ Q I++ + + A+N+
Sbjct: 63 AVRSAPTAAWDVGHGLGTDDNPIFDRMHEASALVAGASIQAAEQIVSGRADR----AVNL 118
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GG HH AD GFC Y D ++ I + + R+ ID+D H G+G + F D RV
Sbjct: 119 AGGLHHAMADHAAGFCVYNDCAIAIAWMLAN-GVERIAYIDVDVHHGDGVQAAFYDDPRV 177
Query: 217 YILDM 221
+ +
Sbjct: 178 LTVSL 182
>gi|384252722|gb|EIE26198.1| histone deacetylase [Coccomyxa subellipsoidea C-169]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
+V GT+L A+LA G A N GG HH D G GFC D+++ + + RV+I
Sbjct: 114 EVAGTLLTARLALRHGLACNTAGGTHHAFPDSGSGFCILNDLAVTAAVLLEEARVERVLI 173
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+DLD HQG+G F + RV+ + + +P
Sbjct: 174 LDLDVHQGDGTALMFQDEPRVFTMSVHGESNFP 206
>gi|359780001|ref|ZP_09283228.1| histone deacetylase superfamily protein [Pseudomonas
psychrotolerans L19]
gi|359372617|gb|EHK73181.1| histone deacetylase superfamily protein [Pseudomonas
psychrotolerans L19]
Length = 308
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LPL+Y DY F H F K+ + + LS+ G L + P E L +
Sbjct: 4 RLPLVYHEDYSPPF---PAGHRFPMEKFRLLHEHLSASGILGADNWQRPELCPDELLALA 60
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H+ Y+++ ++ P + + +P + LV+R + + VGG++L +LA
Sbjct: 61 HAPDYIQAFKAGELPPPLQRQLGLP----WSEALVRRTI-----RAVGGSLLTLELALRH 111
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ RV+I+D D HQG+G
Sbjct: 112 GLACHLAGGTHHAHHDYPAGFCIFNDLAILALSLLESGRAGRVLILDCDVHQGDG 166
>gi|359419320|ref|ZP_09211278.1| putative acetoin utilization protein [Gordonia araii NBRC 100433]
gi|358244727|dbj|GAB09347.1| putative acetoin utilization protein [Gordonia araii NBRC 100433]
Length = 418
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ------SS 105
+ HP + + S G LD + PL+ + L VVH+ +Y+ +++
Sbjct: 22 REHPMNPVRLALTMSLAGSLGVLDGVDPIPPLDIDDDLLRVVHTRNYIDAVREVGGPDGG 81
Query: 106 PNVSIIIEVPPVA-----LFPNCLVQRKVLYPFRKQVGGTILAAKL---AKERGWAINVG 157
PN ++ ++ + +FP ++L VGG++ AAK K R A+N+G
Sbjct: 82 PNKALYEQLYGLGDMDNPVFPGMHEAARML------VGGSVAAAKAIADGKVRR-AVNIG 134
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GG HH GFC Y D ++ I + + R+ ID+DAH G+G E+ F+ D RV
Sbjct: 135 GGMHHAMPSRAAGFCVYNDCAVAIDW-LLGHGFDRIAYIDVDAHHGDGVERVFADDPRVL 193
Query: 218 ILDM 221
+ +
Sbjct: 194 TVSL 197
>gi|148549841|ref|YP_001269943.1| histone deacetylase superfamily protein [Pseudomonas putida F1]
gi|148513899|gb|ABQ80759.1| histone deacetylase superfamily [Pseudomonas putida F1]
Length = 317
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 12 PSMPLPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDIL 68
Query: 91 LVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H SY++ + S + +P + L +R V + VGG++L A++A
Sbjct: 69 ALAHDRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMA 119
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+ G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 120 LQHGIACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 177
>gi|410637975|ref|ZP_11348545.1| histone deacetylase/AcuC/AphA family protein [Glaciecola lipolytica
E3]
gi|410142661|dbj|GAC15750.1| histone deacetylase/AcuC/AphA family protein [Glaciecola lipolytica
E3]
Length = 300
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L G + + +P + ++L V
Sbjct: 2 IPLVFHPIY--SILDLPVRHRFPIQKYQAIYSQLRELG-VPETQFYQPEPVAIDNLKQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y++ L S + R++ +P+ +Q+ GGT+LA++L
Sbjct: 59 NPLYIQELTSGK--------------LDAKAMRRIGFPWSEQLITRTLTAAGGTLLASQL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AIN+ GG+HH A+ G GFC D+ L I RV+I D D HQG+G
Sbjct: 105 ALEYGKAINLTGGYHHAFANFGSGFCMVNDLYLSALQMLRHPQIDRVLIFDCDVHQGDGT 164
Query: 207 EK 208
K
Sbjct: 165 AK 166
>gi|409422584|ref|ZP_11259675.1| histone deacetylase superfamily protein [Pseudomonas sp. HYS]
Length = 304
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY +F H F K+ + L + G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPAF---PAEHRFPMDKFRLLRDHLVASGLTTDAALLRPEICPDDILALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DRAYIERYMHGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + +V+I D D HQG+G
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVHKVLIFDCDVHQGDG 164
>gi|134098359|ref|YP_001104020.1| acetoin dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
gi|133910982|emb|CAM01095.1| acetoin dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
Length = 391
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D S LG + HP + + S G LD +++P A EDL VH YL
Sbjct: 9 WDDSVLGYDLGGQHPLHPVRLDLTMRLARSLGLLDDVEVLKPSPADDEDLERVHRPEYLS 68
Query: 101 SLQSSP----NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+++S+P +V + +F ++ Q I++ + + A+N+
Sbjct: 69 AVRSAPTAAWDVGHGLGTDDNPIFDRMHEASALVAGASIQAAEQIVSGRADR----AVNL 124
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GG HH AD GFC Y D ++ I + + R+ ID+D H G+G + F D RV
Sbjct: 125 AGGLHHAMADHAAGFCVYNDCAIAIAWMLAN-GVERIAYIDVDVHHGDGVQAAFYDDPRV 183
Query: 217 YILDM 221
+ +
Sbjct: 184 LTVSL 188
>gi|294139409|ref|YP_003555387.1| histone deacetylase/AcuC/AphA family protein [Shewanella violacea
DSS12]
gi|293325878|dbj|BAJ00609.1| histone deacetylase/AcuC/AphA family protein [Shewanella violacea
DSS12]
Length = 311
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVE-----PLEASKED 89
LPLIY P Y S L + + H + K+ + + + D N E P + +D
Sbjct: 2 LPLIYHPIY--SQLPLPEGHRYPIMKYQFLYDAIMEKTQNDTNWQQEITFFSPQALTLQD 59
Query: 90 LLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+ VH Y+ L Q N I P + L+QR + GT+L A
Sbjct: 60 IKQVHDADYVDMLACGQLPANKMRRIGFP----WSEALMQRTL-----TSAAGTVLTAHK 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E G AI++ GG+HH D G GFC + D+ L H++ + +I +V+IID D H G+G
Sbjct: 111 AIESGVAIHLSGGYHHAHNDFGSGFCLFNDLVLAAHFSLQKDDIHKVLIIDSDVHHGDG 169
>gi|311031292|ref|ZP_07709382.1| Histone deacetylase family protein, involved in acetoin utilization
[Bacillus sp. m3-13]
Length = 400
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K +YS D+ + HPF+ + L L IV P A+ E+L ++
Sbjct: 12 KAVFVYSDDFQT--YKFSENHPFNQLRVKLTYDLLQKSKLLSAQDIVPPRMATDEELALI 69
Query: 94 HSESYLKSL----------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
H Y++++ + + N + E P+ FPN +L VGGT+ A
Sbjct: 70 HDPRYIEAVKLAGKGLLPKEKANNYGLGTEDTPI--FPNMHEASALL------VGGTLTA 121
Query: 144 AK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
+ + A+N+GGG HH + GFC Y D ++ I Y + +RV+ +D DAH
Sbjct: 122 VDQVMTGKSEHALNLGGGLHHGFRGKASGFCIYNDTAVAIKYLQEKYG-ARVLYVDTDAH 180
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIY 227
G+G + F D V L + G Y
Sbjct: 181 HGDGVQWAFYEDPNVCTLSIHETGRY 206
>gi|429330586|ref|ZP_19211372.1| histone deacetylase superfamily protein [Pseudomonas putida CSV86]
gi|428764696|gb|EKX86825.1| histone deacetylase superfamily protein [Pseudomonas putida CSV86]
Length = 304
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y DY F H F K+ + L + G + P + L +
Sbjct: 1 MRLPLVYHDDYSPEF---PAGHRFPMDKFRLLHDHLIASGLTTDAELHRPDICPNDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y++ + S + +P + L +R V + VGG++LAA+LA +
Sbjct: 58 AHDRAYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAELALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G
Sbjct: 109 HGIACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|224098178|ref|XP_002198520.1| PREDICTED: histone deacetylase 8 isoform 1 [Taeniopygia guttata]
gi|449498690|ref|XP_004177288.1| PREDICTED: histone deacetylase 8 isoform 2 [Taeniopygia guttata]
Length = 372
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 31 PIFKLP---LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
P+ K+P +YSP+Y + K+ + + + + LD+ IV+P AS
Sbjct: 4 PLLKVPPPVYVYSPEYVTLCDSLCKV----PKRASMVHSLIEAYCLLDQMKIVKPKVASM 59
Query: 88 EDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAA 144
E++ H+++YL+ LQ S E L +C + + + VGG TI AA
Sbjct: 60 EEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FEYAAAVGGATITAA 118
Query: 145 K--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ L + AIN GG+HH DE GFC D L I ++ RV+ IDLD H
Sbjct: 119 ECLLDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRQKFDRVLYIDLDLHH 176
Query: 203 GNGHEKDFSSDSRVYILDM--FNPGIYP 228
G+G E FS S+V + + F+PG +P
Sbjct: 177 GDGVEDAFSFTSKVMTVSLHKFSPGFFP 204
>gi|85703855|ref|ZP_01034958.1| acetoin utilization protein AcuC [Roseovarius sp. 217]
gi|85671175|gb|EAQ26033.1| acetoin utilization protein AcuC [Roseovarius sp. 217]
Length = 371
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 8/180 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+L A + L H+ Y+ +LQ++ +
Sbjct: 21 HPLSIPRVPTVIDLCRALGWLPPAQYRTSPRAKPQALTTWHTPDYITALQAAETSGHV-- 78
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
P + +YP FR+ GG++LA L G A N GGG HH AD
Sbjct: 79 TPEIRARHQIGTLSNPIYPEMFRRPATAAGGSLLATDLLAHGGVAYNPGGGTHHGMADHA 138
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GGFC D L I AF+ +SR+ +D+DAH +G F D RV ++ G +P
Sbjct: 139 GGFCYLNDPVLAIK-AFLAQGLSRIAYVDIDAHHCDGVAAAFHGDPRVLMISTHEAGRWP 197
>gi|71907996|ref|YP_285583.1| histone deacetylase superfamily protein [Dechloromonas aromatica
RCB]
gi|71847617|gb|AAZ47113.1| Histone deacetylase superfamily [Dechloromonas aromatica RCB]
Length = 300
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D+ L + H F K+ R+ Q L + G ++ P A+ E+L H Y++++
Sbjct: 7 DVFVLPLPAGHRFPMEKYSRLRQALLASGEFSESDFQLPHAATDEELGRAHDLDYIQAI- 65
Query: 104 SSPNVSIIIEVPPVAL-FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
++ + E A+ FP +V+R R+ G TI A + A + N+ GG
Sbjct: 66 ---SIGELSEAAQKAIGFPWSQGMVERS-----RRSAGATICACRAALAEDVSANLAGGT 117
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH D G GFC + D ++ + RV+I+D D HQGNG D ++
Sbjct: 118 HHAFRDHGEGFCIFNDAAVAARTMQAEGRAKRVLIVDCDVHQGNGTASILRGDDSIFTFS 177
Query: 221 MFNPGIYPRDYE 232
+ +P D E
Sbjct: 178 IHGARNFPFDKE 189
>gi|453073918|ref|ZP_21976716.1| histone deacetylase [Rhodococcus triatomae BKS 15-14]
gi|452765404|gb|EME23661.1| histone deacetylase [Rhodococcus triatomae BKS 15-14]
Length = 427
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +++ HP + ++ +S G ++ I+ P A+ DLL +H+
Sbjct: 18 VVWSPDY-LNYR-WSADHPMNPTRLDLTMSLATSLGLIEGAEIIAPEPATDADLLRIHTP 75
Query: 97 SYLKSLQ---SSPNVSIIIEVPPVAL-FPNCL-VQRKVLYPFRKQV-----GGTILAAK- 145
+ +++ S+ ++ E ++ P+ L + ++P + GGT+ AA+
Sbjct: 76 GLIAAVKEAGSAGAAQLLTEARADSVSAPHGLGSEDNPIFPRMHEASAILAGGTLAAARE 135
Query: 146 LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH G+
Sbjct: 136 IASGRARRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGFDRIAYIDVDAHHGD 194
Query: 205 GHEKDFSSDSRVYILDM 221
G + F D RV + +
Sbjct: 195 GVQHAFLGDPRVLTVSL 211
>gi|317129960|ref|YP_004096242.1| histone deacetylase [Bacillus cellulosilyticus DSM 2522]
gi|315474908|gb|ADU31511.1| Histone deacetylase [Bacillus cellulosilyticus DSM 2522]
Length = 384
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP +S+ E HPF+ + L L+ N I +A+ E+L ++H E
Sbjct: 7 FIYSPQ-QLSYKFSEH-HPFNQKRLTLTKDLLEKLHALNPNDIYPARKATDEELSLIHEE 64
Query: 97 SYLKSLQ--------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
++ +++ SS ++ I +FP L VGGT+ A L
Sbjct: 65 DFITAVKGASMGEFRSSYAMTYGIGTEDTPVFPYMHDAAAWL------VGGTLAAVDLVF 118
Query: 149 ERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
E+G+ AIN+GGG HH + GFC Y D S+ I Y + + ++V+ +D DAH G+G
Sbjct: 119 EQGFKHAINLGGGLHHGFRGKASGFCIYNDSSIAIEYMRKKYD-AKVLYVDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPG 225
+ F D V L G
Sbjct: 178 QWAFYDDPNVCTLSFHESG 196
>gi|221133465|ref|ZP_03559770.1| histone deacetylase superfamily protein [Glaciecola sp. HTCC2999]
Length = 300
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L G +D P L ++
Sbjct: 2 IPLVFHPIY--SQLDLPHRHRFPIEKYQGIYDALIKLG-VDCANFHTPQALDPSYLTQIY 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ L S ++ P A+ R++ +P+ +Q+ GT+L A+L
Sbjct: 59 DHDYIHQLCSG-------QLDPKAM-------RRIGFPWSEQLIQRTLTAAAGTVLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH AD G GFC D+ L + +I V+I D D HQG+G
Sbjct: 105 AMEHGKALNLTGGYHHAFADFGSGFCMVNDLYLAAKTMLINPDIDSVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPR 229
S D+ ++ + + +P
Sbjct: 165 ALLASKDNDIFTVSIHGEKNFPH 187
>gi|299066616|emb|CBJ37806.1| Histone deacetylase [Ralstonia solanacearum CMR15]
Length = 327
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y+ ++ + + P QR++ +P+
Sbjct: 48 EAPRAEDDALLLAHAPDYISAVGAG-------RLEPAR-------QREIGFPWSPEMVER 93
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q + R
Sbjct: 94 SRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--MQRRLGR 151
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG DS V+ L + YP EA
Sbjct: 152 TPEHFPVAIVDLDVHQGNGTASILRDDSSVFTLSVHGEKNYPFRKEA 198
>gi|404258488|ref|ZP_10961807.1| putative acetoin utilization protein [Gordonia namibiensis NBRC
108229]
gi|403403002|dbj|GAC00217.1| putative acetoin utilization protein [Gordonia namibiensis NBRC
108229]
Length = 418
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD V P + L VVH+ Y+ ++++ + + +
Sbjct: 24 HPMNPVRLALTMTLAQSLGVLDDVETVPPQAIDDDALTVVHTRDYIDAVRAVGSGTASLS 83
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF V R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 84 GPLLERLFGLGDADNPVFAGMHEAARLLVGGTLAAAQTVASGAATR--AVNIGGGMHHAM 141
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I Y + R+ ID+DAH G+G + +F++D RV + +
Sbjct: 142 KARAAGFCIYNDCAIAIRY-LLDKGFDRIAYIDVDAHHGDGVQVEFAADPRVMTVSL 197
>gi|409390118|ref|ZP_11241889.1| putative acetoin utilization protein [Gordonia rubripertincta NBRC
101908]
gi|403199945|dbj|GAB85123.1| putative acetoin utilization protein [Gordonia rubripertincta NBRC
101908]
Length = 418
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD V P + L VVH+ Y+ ++++ + + +
Sbjct: 24 HPMNPVRLALTMTLAQSLGVLDDVETVPPQAIDDDALTVVHTRDYIDAVRAVGSGTASLS 83
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF V R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 84 GPLLERLFGLGDADNPVFAGMHEAARLLVGGTLAAAQTVASGAATR--AVNIGGGMHHAM 141
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I Y + R+ ID+DAH G+G + +F++D RV + +
Sbjct: 142 KARAAGFCIYNDCAIAIRY-LLDKGFDRIAYIDVDAHHGDGVQVEFAADPRVMTVSL 197
>gi|445059378|ref|YP_007384782.1| histone deacetylase family protein [Staphylococcus warneri SG1]
gi|443425435|gb|AGC90338.1| histone deacetylase family protein [Staphylococcus warneri SG1]
Length = 386
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L FL K I+EP A+ +++ ++H Y+++++ + + + E
Sbjct: 24 HPFNQMRLKLTTELLLDAQFLTKENILEPRIATDDEIGLIHKYDYIQAIKHASHGILSAE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ-------VGGTILAAKLAKERGW--AINVGGGFHHCS 164
F V PFR VGG + A + + ++GGG HH
Sbjct: 84 EAKKYGFNEDTV------PFRHMHQHCARIVGGALNLADKIMDGTYTNGCHLGGGLHHAL 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
A GFC Y D+++ Y + N RVMIID DAH G+G + F + + V +
Sbjct: 138 AGRANGFCIYNDVAITAQYLVNRYN-QRVMIIDTDAHHGDGTQWSFYTSNEVLTYSIHET 196
Query: 225 G 225
G
Sbjct: 197 G 197
>gi|398305866|ref|ZP_10509452.1| acetoin utilization protein AcuC [Bacillus vallismortis DV1-F-3]
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D+ I+ P AS+++L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDEGDIISPRLASEDELALVHTD 63
Query: 97 SYLKSL----------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK- 145
Y++++ + N + E PV F +L VGGT+ AA
Sbjct: 64 DYIQAVKLAGACKLPAEEGENYGLGTEDTPV--FAGMHEAASLL------VGGTLTAADW 115
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
++ + A N+GGG HH GFC Y D ++ I Y + +RV+ ID DAH G+
Sbjct: 116 VMSGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYK-ARVLYIDTDAHHGD 174
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F + V L + G Y
Sbjct: 175 GVQFTFYDNPGVCTLSIHETGRY 197
>gi|383451822|ref|YP_005358543.1| Histone deacetylase family protein [Flavobacterium indicum
GPTSA100-9]
gi|380503444|emb|CCG54486.1| Histone deacetylase family protein [Flavobacterium indicum
GPTSA100-9]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + P + ED++ VH + Y++ L + +
Sbjct: 18 HRFPMIKYELLPQQLLYEGTVVDRQFFSPELPNLEDIIAVHDKKYVQQL-------LDLT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P A+ RK+ +P ++ GTI AK A A N+ GG HH +
Sbjct: 71 LDPRAV-------RKIGFPLSSELIEREFRLAQGTIEGAKNACIDKIAFNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y Q +++IIDLD HQGNG + F ++ RV+ +
Sbjct: 124 NRGEAFCLLNDQAIAAQYLLNQKLAKQILIIDLDVHQGNGTAEIFQNNPRVFTFSVHGKS 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|381211806|ref|ZP_09918877.1| acetoin utilization protein [Lentibacillus sp. Grbi]
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII-- 111
HPF+ + L L + I++P +A++++L ++H +Y+ +++ + ++
Sbjct: 22 HPFNQKRVLLTKDLLEKTNLLSADHIIKPRKAAEDELALIHDRAYINAVKKAGTENLTEN 81
Query: 112 ------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
I +FPN L VGGT+ A L + A+N+GGG HH
Sbjct: 82 ESMEYGIGTEDTPVFPNMHEASTYL------VGGTLSAVDSVLQGKAAHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + ++ +V+ +D DAH G+G + F D V L +
Sbjct: 136 FKRKASGFCIYNDGAIAIKYIREKYDL-KVLYVDTDAHHGDGVQWAFYDDPNVCTLSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|163802804|ref|ZP_02196693.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. AND4]
gi|159173344|gb|EDP58167.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. AND4]
Length = 307
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC------IVEPLEASKE 88
LPLIY P Y S L + K H + K+ + Q + + L C +P S +
Sbjct: 2 LPLIYHPIY--SQLDLPKGHRYPIMKYHHLYQAVEQKRAL--GCWGRQVEFFQPTSLSVD 57
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTIL 142
++ VHSE Y+ L S +P + FP L+ R + GT+L
Sbjct: 58 EVKRVHSEEYVDLLVSGA-------IPAAKMRRIGFPWSEALITRTL-----TSTAGTVL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A+ A E G A+++ GG+HH D G GFC + D+++ I +VMIID D H
Sbjct: 106 TAEKALEHGIAVHLSGGYHHAHKDFGSGFCLFNDLAIAAKRMLGHELIDKVMIIDSDVHH 165
Query: 203 GNG 205
G+G
Sbjct: 166 GDG 168
>gi|17540332|ref|NP_500787.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
gi|30923304|sp|Q20296.2|HDA6_CAEEL RecName: Full=Histone deacetylase 6
gi|351063052|emb|CCD71099.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
Length = 955
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 428 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 486
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 487 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 546
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 547 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 606
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY 231
+ F DS V + + F P P+DY
Sbjct: 607 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 637
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNV---- 108
HP S + +I + L+ L+K ++ LE DL V H +S +K L S
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 109 --SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
S + V + N + K + + I+A + + G+A+ G HH +
Sbjct: 94 INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHADSV 150
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 199
>gi|193206283|ref|NP_001122780.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
gi|351063059|emb|CCD71106.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
Length = 957
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 430 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 488
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 489 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 548
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 549 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 608
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY 231
+ F DS V + + F P P+DY
Sbjct: 609 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDY 639
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNVS--- 109
HP S + +I + L+ L+K ++ LE DL V H +S +K L S +
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 110 IIIEVPP-----VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCS 164
I + + F N + K + + I+A + + G+A+ G HH
Sbjct: 94 INSQCEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHAD 150
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
+ GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRV 201
>gi|441513647|ref|ZP_20995475.1| putative deacetylase [Gordonia amicalis NBRC 100051]
gi|441451593|dbj|GAC53436.1| putative deacetylase [Gordonia amicalis NBRC 100051]
Length = 418
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD V P + L VVH+ Y+ ++++ + + +
Sbjct: 24 HPMNPVRLALTMTLAQSLGVLDDVETVPPQAIDDDALTVVHTRDYIDAVRAVGSGTASLS 83
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF V R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 84 GPLLERLFGLGDADNPVFAGMHEAARLLVGGTLAAAQTVASGAATR--AVNIGGGMHHAM 141
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
GFC Y D ++ I Y + R+ ID+DAH G+G + +F++D RV + +
Sbjct: 142 RARAAGFCIYNDCAIAIRY-LLDKGFDRIAYIDVDAHHGDGVQVEFAADPRVMTVSLHQ 199
>gi|86148483|ref|ZP_01066772.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. MED222]
gi|85833723|gb|EAQ51892.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. MED222]
Length = 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 33/186 (17%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-------IVEPLEASK 87
+PLIY P Y S L + + H + +K+ + + E +D + + +P+ S
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY--LLLHSAVEALMDSDPQWGNAFEMFQPMPVSV 57
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GG 139
E + VH Y+ L S +P + R++ +P+ +Q+ GG
Sbjct: 58 EQVKQVHDGEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSGG 103
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD 199
T LAA++A E G AI++ GG+HH D G GFC D+ L +A +I +V+I+D D
Sbjct: 104 TCLAAEMAIESGLAIHLSGGYHHAHRDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDSD 163
Query: 200 AHQGNG 205
H G+G
Sbjct: 164 VHHGDG 169
>gi|429751872|ref|ZP_19284765.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178776|gb|EKY20044.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 307
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
H F K+ + Q L EG P +A++ +VH++ YL + + + +
Sbjct: 24 HRFPMEKYALLPQQLLYEGIASATNFHTPEKATQATAALVHTQPYLHNF-----LHLTLS 78
Query: 113 --EVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERG-WAINVGGGFHHCSADE 167
E P+ F C LV R++ V GT+ A A G A N+ GG HH ++
Sbjct: 79 HKEALPIG-FVQCQQLVDRELTL-----VQGTVEGALWALRTGEIAFNIAGGTHHAFSNR 132
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y + +V+I+DLD HQGNG + F + V+ M Y
Sbjct: 133 GEGFCMLNDQAIAAAYLLHHTAVKKVLIVDLDVHQGNGTAEIFRNTPEVFTFSMHAQANY 192
Query: 228 PRDYE 232
P + E
Sbjct: 193 PFEKE 197
>gi|389584267|dbj|GAB67000.1| histone deacetylase, partial [Plasmodium cynomolgi strain B]
Length = 393
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK--EDLLVV 93
P ++ P Y S EK H F K+ +I L G + + + S+ L +
Sbjct: 100 PYVFHPIYS-SVPMKEKYHRFKIKKYEKIFSRLIEGGIYNSDYSIPSCNISEMITPLFSI 158
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E +++ + S + +E + L+P + + F ++ GTIL++ LA +
Sbjct: 159 HDEGFIEEIFSIVINNEQVEKYELTLYPYLVCR------FLIEINGTILSSLLAMKHFMC 212
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 213 MHIGGGNHHSKKNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 272
Query: 214 SRVYILDMFNPGIYP 228
+ V + + +P
Sbjct: 273 ANVKTISLHCRDNFP 287
>gi|424033537|ref|ZP_17772951.1| histone deacetylase domain protein [Vibrio cholerae HENC-01]
gi|408874401|gb|EKM13572.1| histone deacetylase domain protein [Vibrio cholerae HENC-01]
Length = 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L + + +P + +++
Sbjct: 2 LPLIYHPIY--SQLELPEGHRYPIMKYQYLYQAVKDKLVQQDWGQHIEFSQPQPLNVDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
+VHSE Y+ L S ++P + FP LV R ++ GT+L A
Sbjct: 60 KLVHSEEYVDLLVSG-------DMPAAKMRRIGFPWSETLVSRTLM-----STAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+ + Y ++ +V+IID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKDFGSGFCLFNDLVIAAKYMLETEHVDKVLIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|407368493|ref|ZP_11115025.1| histone deacetylase superfamily protein [Pseudomonas mandelii JR-1]
Length = 306
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDG 164
>gi|262189882|ref|ZP_06048207.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae CT
5369-93]
gi|262034235|gb|EEY52650.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae CT
5369-93]
Length = 295
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|297565408|ref|YP_003684380.1| histone deacetylase [Meiothermus silvanus DSM 9946]
gi|296849857|gb|ADH62872.1| Histone deacetylase [Meiothermus silvanus DSM 9946]
Length = 378
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P++Y P Y G E HPF + + L + G+ ++P A++ED+L+
Sbjct: 1 MSVPVLYHPAYKTYTFGPE--HPFSPRRLEMLTALLEALGYPVGASSLQP--ATREDILM 56
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK 145
VH+E ++ ++ + + L FP + L VGGT+ AA+
Sbjct: 57 VHAERLVRRVEGCSVGEVAADAEHYGLGTADTPIFPGMDEATRWL------VGGTLEAAR 110
Query: 146 --LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
L E + +GGG HH D GFC Y D+S+ I + + + RV +D+D H G
Sbjct: 111 MILRGEAQEVLQLGGGLHHAQYDRSSGFCVYNDLSVAIRH--LTRSGLRVAYLDIDVHHG 168
Query: 204 NGHEKDFSSDSRVYILDMFNPGIY 227
+G + ++ V L G Y
Sbjct: 169 DGVQWIHYDEAEVLTLSFHESGRY 192
>gi|357012364|ref|ZP_09077363.1| acetoin utilization protein AcuC [Paenibacillus elgii B69]
Length = 392
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS----SPNVS 109
HPF+ + L L + ++ P+ A + L VHS+ Y+ ++++ P
Sbjct: 22 HPFNQQRLVLTVDLLRKAKALSGDSLIRPMPADETQLCSVHSQEYVNAVKALSADQPTEE 81
Query: 110 II-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGF 160
+ ++ FP L VGG+I A A L E G A+++GGG
Sbjct: 82 WLHQAGKYGLDTEDTPFFPGMHQATSFL------VGGSIRAVDAVLGGEAGHALHLGGGL 135
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH +G GFC Y D ++ I +A + + RV+ ID D H G+G + F +D
Sbjct: 136 HHAMPHKGAGFCVYNDAAVAIAHAKSKYGV-RVLYIDTDVHHGDGVQWSFYTDPDTCTFS 194
Query: 221 MFNPGIY 227
+ G Y
Sbjct: 195 IHETGKY 201
>gi|213963775|ref|ZP_03392024.1| histone deacetylase family protein [Capnocytophaga sputigena Capno]
gi|213953551|gb|EEB64884.1| histone deacetylase family protein [Capnocytophaga sputigena Capno]
Length = 300
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
H F K+ + Q L EG + P +A++ +VH++ YL + + + +
Sbjct: 17 HRFPMEKYALLPQQLLYEGIASASNFHTPEKATQATAALVHTQPYLHNF-----LHLTLS 71
Query: 113 --EVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW-AINVGGGFHHCSADE 167
E P+ F C LV R++ V GT+ A A G A N+ GG HH ++
Sbjct: 72 HKEALPIG-FVQCQQLVDRELTL-----VQGTVEGALWALRTGEVAFNIAGGTHHAFSNR 125
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y + +V+I+DLD HQGNG + F + V+ M Y
Sbjct: 126 GEGFCMLNDQAIAAAYLLHHTAVKKVLIVDLDVHQGNGTAEIFRNTPEVFTFSMHAQANY 185
Query: 228 PRDYE 232
P + E
Sbjct: 186 PFEKE 190
>gi|386759547|ref|YP_006232763.1| acetoin utilization protein AcuC [Bacillus sp. JS]
gi|384932829|gb|AFI29507.1| acetoin utilization protein AcuC [Bacillus sp. JS]
Length = 396
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 15 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLQTINAFDDGDIVTPRLASEEELALVHTD 72
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 127 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 184
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 185 VQFTFYDNPDVCTLSIHETGRY 206
>gi|416247314|ref|ZP_11635620.1| histone deacetylase family protein [Moraxella catarrhalis BC8]
gi|326569907|gb|EGE19957.1| histone deacetylase family protein [Moraxella catarrhalis BC8]
Length = 301
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ D+ + + + R++ +DLD HQGNG+ +++ V++ + YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSIHGKKNYP 186
>gi|113475495|ref|YP_721556.1| histone deacetylase superfamily protein [Trichodesmium erythraeum
IMS101]
gi|110166543|gb|ABG51083.1| histone deacetylase superfamily [Trichodesmium erythraeum IMS101]
Length = 303
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY P+Y I H F +K+ + + L + N + P E + +
Sbjct: 1 MNLPVIYHPNY---VAPIPPGHRFPMAKFQLLYEMLLVDEV--TNYFLTPNFPPLEWIEL 55
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H +Y+K P I +P + L R + VGGTIL A+LA +
Sbjct: 56 IHHPNYIKKYCQGTLDPKAQRRIGLP----WSQALANRTCI-----AVGGTILTAQLALK 106
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 107 HGLACNTAGGTHHAFPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQGDGTAWI 166
Query: 210 FSSDSRVYILDM 221
F D V+ M
Sbjct: 167 FQDDPTVFTFSM 178
>gi|321312510|ref|YP_004204797.1| protein deacetylase [Bacillus subtilis BSn5]
gi|320018784|gb|ADV93770.1| protein deacetylase [Bacillus subtilis BSn5]
Length = 387
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N+GGG HH GFC Y D ++ I Y + SRV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYR-SRVLYIDTDAHHGDGV 176
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 177 QFTFYDNPDVCTLSIHETGRY 197
>gi|428280446|ref|YP_005562181.1| acetoin dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485403|dbj|BAI86478.1| acetoin dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 396
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 15 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTD 72
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N+GGG HH GFC Y D ++ I Y + SRV+ ID DAH G+G
Sbjct: 127 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYR-SRVLYIDTDAHHGDGV 185
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 186 QFTFYDNPDVCTLSIHETGRY 206
>gi|395445593|ref|YP_006385846.1| histone deacetylase superfamily protein [Pseudomonas putida ND6]
gi|388559590|gb|AFK68731.1| histone deacetylase superfamily protein [Pseudomonas putida ND6]
Length = 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 12 PSMPLPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDIL 68
Query: 91 LVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H SY+ + S + +P + L +R V + VGG++L A++A
Sbjct: 69 ALAHDRSYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMA 119
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+ G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 120 LQHGIACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 177
>gi|85709385|ref|ZP_01040450.1| hypothetical protein NAP1_10908 [Erythrobacter sp. NAP1]
gi|85688095|gb|EAQ28099.1| hypothetical protein NAP1_10908 [Erythrobacter sp. NAP1]
Length = 312
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P + + GGT LAA+LA E G+A N G HH D G G+C + D+
Sbjct: 74 ERRIGFPVTEHIRDRVRHTNGGTWLAAQLAMEHGYAANSAAGSHHALGDTGAGYCVFNDL 133
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
++ + Q + +RV+I+DLD HQG+G + V+ L + +P
Sbjct: 134 AVATNRLLAQGDAARVLIVDLDVHQGDGTASLLAGREDVFTLSVHAEKNFP 184
>gi|417825291|ref|ZP_12471879.1| histone deacetylase domain protein [Vibrio cholerae HE48]
gi|340046776|gb|EGR07706.1| histone deacetylase domain protein [Vibrio cholerae HE48]
Length = 306
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|328950005|ref|YP_004367340.1| histone deacetylase [Marinithermus hydrothermalis DSM 14884]
gi|328450329|gb|AEB11230.1| Histone deacetylase [Marinithermus hydrothermalis DSM 14884]
Length = 377
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+IY P Y G + HPF + + L + G+ + P +A++ ++L VH
Sbjct: 2 VPVIYHPAYLSYNFGPQ--HPFSPVRLEMLLDLLHALGY--PPPLHTPPQATRAEVLRVH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCL-VQRKVLYP-----FRKQVGGTILAAKL-- 146
+E ++ ++++ + PP L L ++P R VGGT+ A+L
Sbjct: 58 AERFVTRVEAAARGA-----PPADLHHYGLGTTDTPVFPEMDAAARWIVGGTLEGARLIA 112
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + +GGG HH D+ GFC Y D+++ I Y Q RV ID+D H G+G
Sbjct: 113 AGRTQRVLQLGGGLHHAQYDKASGFCVYNDLAVAIRYLTDQ--GLRVAYIDIDVHHGDGV 170
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D V L + G Y
Sbjct: 171 QWIFYDDPNVLTLSLHESGRY 191
>gi|226943137|ref|YP_002798210.1| histone deacetylase superfamily protein [Azotobacter vinelandii DJ]
gi|226718064|gb|ACO77235.1| histone deacetylase superfamily [Azotobacter vinelandii DJ]
Length = 316
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y +Y SF H F K+ + L G + P + L +
Sbjct: 11 MSLPLVYHDEYSPSF---PDGHRFPMEKFRLLRDHLVDSGLTSDAELRRPEPCPTDILAL 67
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H +Y++ S + + P L +R VL VGG++LAA+LA E G
Sbjct: 68 AHDPAYIERYCSGALSREELRRLGLPWTP-ALARRTVL-----AVGGSLLAAELALEHGL 121
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 122 ACHLAGGTHHAHHDHPSGFCIFNDLAVVSRYLLASGRVGRVLIFDCDVHQGDG 174
>gi|300784325|ref|YP_003764616.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei U32]
gi|384147591|ref|YP_005530407.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei S699]
gi|399536210|ref|YP_006548872.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei S699]
gi|299793839|gb|ADJ44214.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei U32]
gi|340525745|gb|AEK40950.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei S699]
gi|398316980|gb|AFO75927.1| acetoin utilization protein AcuC [Amycolatopsis mediterranei S699]
Length = 389
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D + LG + HPF+ + + + G L ++ P A E+LL VH+ YL
Sbjct: 7 WDRALLGYDLGGDHPFNPVRLELTIRLATELGVLRDVELLVPTGAGDEELLRVHAPEYLA 66
Query: 101 SLQSSP----NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-KLAK-ERGWAI 154
+++ +P +V + +F + ++ VG T+LAA K+A+ E A+
Sbjct: 67 AVREAPLVGWDVGHGLGTSDNPVFSDMHDASALV------VGSTLLAARKVAEGEARRAV 120
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D+ GFC Y D ++ I + + R+ ID D H G+G + F D
Sbjct: 121 NIAGGLHHAMRDQAAGFCVYNDCAVAISW-LLDHGFDRIAYIDTDVHHGDGVQAAFYDDP 179
Query: 215 RVYILDM 221
RV + M
Sbjct: 180 RVLTISM 186
>gi|300691346|ref|YP_003752341.1| histone deacetylase [Ralstonia solanacearum PSI07]
gi|299078406|emb|CBJ51057.2| Histone deacetylase [Ralstonia solanacearum PSI07]
Length = 324
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+VH+ Y+ ++ + + P QR++ +P+
Sbjct: 44 EAPRAGDDALLLVHAPDYVSAVGAG-------RLDPAR-------QREIGFPWSLAMVER 89
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 90 SRRSAGATMAACEAAMTDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGR 147
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG +D+ V+ L + YP EA
Sbjct: 148 TPDGFPVAIVDLDVHQGNGTASILRNDASVFTLSVHGEKNYPFRKEA 194
>gi|402831312|ref|ZP_10880001.1| histone deacetylase family protein [Capnocytophaga sp. CM59]
gi|402282578|gb|EJU31116.1| histone deacetylase family protein [Capnocytophaga sp. CM59]
Length = 300
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK-----SLQSSPNV 108
H F K+ + + L EG + P + + L + H+ +Y++ +L+ +
Sbjct: 17 HRFPMEKYALLHEQLLWEGIATEADFFAPEKVALSSLYLAHTPAYVQDFVGQTLEERTRI 76
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
I + L+ R++ V GTI A A E A N+ GG HH +D G
Sbjct: 77 RIGF------VQSQQLIDRELTL-----VQGTIEGALYALEGQVAFNIAGGTHHAYSDRG 125
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y + RV+IIDLD HQGNG + F+ V+ M G YP
Sbjct: 126 EGFCMLNDQAVAAAYLLDKGKAQRVLIIDLDVHQGNGTAEIFAQKPAVFTFSMHAQGNYP 185
>gi|257094856|ref|YP_003168497.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047380|gb|ACV36568.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 306
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L Y+ D L + H F K+ R+ + L + G P+ AS E L
Sbjct: 3 RVKLFYT---DTFVLPLPPGHRFPMEKYARLRERLRASGQFADADFRSPMAASTEQLCHA 59
Query: 94 HSESYL-KSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y+ + + + + I + FP +V+R R+ G TI A ++A +
Sbjct: 60 HVAEYVARVCRGDLSAAEIRRIG----FPWSEGMVERS-----RRSAGATIAACRIALQE 110
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
AIN+ GG HH AD G GFC + D ++ + + R+ ++D D HQGNG
Sbjct: 111 TCAINLAGGTHHAHADHGEGFCVFNDAAVAARVLRAEGCVQRLAVVDCDVHQGNGTASIC 170
Query: 211 SSDSRVYILDMFNPGIYP 228
+ D+ V+ + +P
Sbjct: 171 AEDASVFTFSIHAQKNFP 188
>gi|418636659|ref|ZP_13199005.1| histone deacetylase family protein [Staphylococcus lugdunensis
VCU139]
gi|374840714|gb|EHS04199.1| histone deacetylase family protein [Staphylococcus lugdunensis
VCU139]
Length = 384
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L + G+L+ + IVEP A+ +L +VH Y+++++ +S +
Sbjct: 24 HPFNQMRLKLTTELLQTAGYLNNSNIVEPPIATTNELTLVHQYDYVQAIKHASHGILSNQ 83
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTILAAKLAKERGW--AINVGGGFHHCSADEGG 169
E L Q ++ + VGG + A L + + ++GGG HH
Sbjct: 84 EADKYGLSGEDTNQFNNMHSHSARIVGGALTLADLIMKGIYHNGCHLGGGLHHALEGRAN 143
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ Y Q RV+I+D DAH G+G + F +D + + G ++
Sbjct: 144 GFCVYNDVAITAKY-LNQKYGQRVLIVDTDAHHGDGTQWRFYTDEEIMCYSIHETGKFLF 202
Query: 228 P-RDYEARRFIDQKVEVVVN 246
P + R DQ VN
Sbjct: 203 PGSGHYTERGEDQGYGYTVN 222
>gi|91775829|ref|YP_545585.1| histone deacetylase superfamily protein [Methylobacillus
flagellatus KT]
gi|91709816|gb|ABE49744.1| histone deacetylase superfamily [Methylobacillus flagellatus KT]
Length = 307
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L+ PD + + + LHP ++ I L+ LDK E +A+ E LL VH
Sbjct: 5 LVSHPDTLLHVM--DGLHPESPARITAIMDALAEHRLLDKLQRHEAPQATDEALLRVHDA 62
Query: 97 SYLKSLQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
+Y+K ++S +P I+ P A+ P L L+ G I A L ++
Sbjct: 63 AYIKHIRSIAPRAGIVRLDPDTAMGPMSL--SACLH----ASGAVIKAVDLVMQK----Q 112
Query: 156 VGGGF-------HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
V F HH GFC + I+ + YA + R+ ++D+D H G+G E
Sbjct: 113 VTNAFCCVRPPGHHAGRARAAGFCIFNHIAAGVAYALASYKLKRIAVLDIDVHHGDGTED 172
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVVN 246
F +D RV + F YP D +++ +VN
Sbjct: 173 IFRNDPRVMLCSTFQHPFYPHSGA-----DTRLDHIVN 205
>gi|289550511|ref|YP_003471415.1| NAD-independent protein deacetylase AcuC [Staphylococcus
lugdunensis HKU09-01]
gi|315658002|ref|ZP_07910876.1| acetoin utilization protein AcuC [Staphylococcus lugdunensis
M23590]
gi|289180043|gb|ADC87288.1| NAD-independent protein deacetylase AcuC [Staphylococcus
lugdunensis HKU09-01]
gi|315497038|gb|EFU85359.1| acetoin utilization protein AcuC [Staphylococcus lugdunensis
M23590]
Length = 385
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L + G+L+ + IVEP A+ +L +VH Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLQTAGYLNNSNIVEPPIATTNELTLVHQYDYVQAIKHASHGILSNQ 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTILAAKLAKERGW--AINVGGGFHHCSADEGG 169
E L Q ++ + VGG + A L + + ++GGG HH
Sbjct: 85 EADKYGLSGEDTNQFNNMHSHSARIVGGALTLADLIMKGIYHNGCHLGGGLHHALEGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ Y Q RV+I+D DAH G+G + F +D + + G ++
Sbjct: 145 GFCVYNDVAITAKY-LNQKYGQRVLIVDTDAHHGDGTQWRFYTDEEIMCYSIHETGKFLF 203
Query: 228 P-RDYEARRFIDQKVEVVVN 246
P + R DQ VN
Sbjct: 204 PGSGHYTERGEDQGYGYTVN 223
>gi|385784140|ref|YP_005760313.1| histone deacetylase family protein [Staphylococcus lugdunensis
N920143]
gi|418413816|ref|ZP_12987032.1| hypothetical protein HMPREF9308_00197 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|339894396|emb|CCB53674.1| histone deacetylase family protein [Staphylococcus lugdunensis
N920143]
gi|410877454|gb|EKS25346.1| hypothetical protein HMPREF9308_00197 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 385
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L + G+L+ + IVEP A+ +L +VH Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLQTAGYLNNSNIVEPPIATTNELTLVHQYDYVQAIKHASHGILSNQ 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTILAAKLAKERGW--AINVGGGFHHCSADEGG 169
E L Q ++ + VGG + A L + + ++GGG HH
Sbjct: 85 EADKYGLSGEDTNQFNNMHSHSARIVGGALTLADLIMKGIYHNGCHLGGGLHHALEGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ Y Q RV+I+D DAH G+G + F +D + + G ++
Sbjct: 145 GFCVYNDVAITAKY-LNQKYGQRVLIVDTDAHHGDGTQWRFYTDEEIMCYSIHETGKFLF 203
Query: 228 P-RDYEARRFIDQKVEVVVN 246
P + R DQ VN
Sbjct: 204 PGSGHYTERGEDQGYGYTVN 223
>gi|153217599|ref|ZP_01951280.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae 1587]
gi|153803619|ref|ZP_01958205.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-3]
gi|124113455|gb|EAY32275.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae 1587]
gi|124120845|gb|EAY39588.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-3]
Length = 306
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|417950544|ref|ZP_12593664.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
ATCC 33789]
gi|342806327|gb|EGU41555.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
ATCC 33789]
Length = 306
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 37/188 (19%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNC-------IVEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D + + +P
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPLWKSKFEVFQPKPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSDYVDLLVSG-------SLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA +A E G AI++ GG+HH D G GFC D+ L +A + +V+I+D
Sbjct: 102 GGTCLAADMAIESGLAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEQVDKVLIVD 161
Query: 198 LDAHQGNG 205
D H G+G
Sbjct: 162 SDVHHGDG 169
>gi|148655721|ref|YP_001275926.1| histone deacetylase superfamily protein [Roseiflexus sp. RS-1]
gi|148567831|gb|ABQ89976.1| histone deacetylase superfamily [Roseiflexus sp. RS-1]
Length = 298
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L YS D L + + H F +K+ + + S+EG + ++ P A D+L H
Sbjct: 1 MKLFYS---DTFVLPLPEGHRFPITKYAMLRERASAEGLGE---LIVPAAADDRDILRAH 54
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWA 153
+ YL +Q + P+ LV+R R+ VG TI A + A G A
Sbjct: 55 TADYLHRIQIGAMSDREMRQIGFPWSPH-LVERS-----RRSVGATIAACRTALSGDGIA 108
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++ GG HH AD G G+C + D + + + RV+IID D HQGNG + D
Sbjct: 109 ASLAGGTHHAFADHGEGYCVFNDSVIAARVMQAEGRVRRVVIIDCDVHQGNGIAAILAGD 168
Query: 214 SRVYILDMFNPGIYP 228
++ + YP
Sbjct: 169 ETIFSFSIHGAKNYP 183
>gi|116754722|ref|YP_843840.1| histone deacetylase superfamily protein [Methanosaeta thermophila
PT]
gi|116666173|gb|ABK15200.1| histone deacetylase superfamily [Methanosaeta thermophila PT]
Length = 370
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGF-LDKNCIVE-PLEASKEDLLVVHSESYLKSL-QSSPNVSI 110
HP ++ + + GF L + V+ P AS++DLL+VH Y++++ + P+ ++
Sbjct: 19 HPLQPARIMLTYRMIEEYGFFLGYDTEVQMPYYASEDDLLMVHDPGYIQAVKEERPDPAL 78
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWAINVGGGFHHCSADEGG 169
++ P +FP ++ G +I AAK +A E A N+ GG HH
Sbjct: 79 GLDEPDTPVFPGIYDASALI------AGASIEAAKRVASEPCVAFNLAGGLHHAFPARAA 132
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC + D +L I ++ RV+ ID+DAH G+G + F D V + + G Y
Sbjct: 133 GFCVFNDCALGIRT--LRKRFDRVLYIDIDAHHGDGVQYIFYEDPSVLTISIHESGKY 188
>gi|345324724|ref|XP_001510728.2| PREDICTED: hypothetical protein LOC100079804 [Ornithorhynchus
anatinus]
Length = 848
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L +V+P AS E++ H+++
Sbjct: 410 IYSPEYVTACDSLSKV----PKRASMVHSLIEAYALLKLMRVVKPKVASMEEMATFHTDA 465
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG---W 152
YL+ LQ S E L +C + + + VGG + A G
Sbjct: 466 YLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLNDGKCKI 524
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ RV+ +DLD H G+G E FS
Sbjct: 525 AINWAGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRVLYVDLDLHHGDGVEDAFSF 582
Query: 213 DSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 583 TSKVMTVSLHKFSPGFFP 600
>gi|239814774|ref|YP_002943684.1| histone deacetylase [Variovorax paradoxus S110]
gi|239801351|gb|ACS18418.1| Histone deacetylase [Variovorax paradoxus S110]
Length = 311
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 84 EASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
A+ +L + H+ ++ ++ SP I P + +V+R R+ G T
Sbjct: 48 RATDGELALAHTPQWIAAISDGSVSPQAMREIGFP----WSEAMVERS-----RRSTGAT 98
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----RVMII 196
I A + A G A N+ GG HH AD+GGGFC + D ++ + + +V +I
Sbjct: 99 IAACRAAFAGGVAANMAGGTHHAYADKGGGFCVFNDAAVAARLMQAEHGRAGRQLKVAVI 158
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
DLD HQGNG F SD V+ L + +P EA
Sbjct: 159 DLDVHQGNGTASIFRSDPSVFTLSLHGQKNFPFRKEA 195
>gi|162457481|ref|YP_001619848.1| histone deacetylase [Sorangium cellulosum So ce56]
gi|161168063|emb|CAN99368.1| histone deacetylase family protein [Sorangium cellulosum So ce56]
Length = 327
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
I EP S EDLL VH+ Y++++ + P L + + L P+
Sbjct: 49 IEEPGPVSDEDLLRVHTPGYVQAIATGE--------------PRALAESQKL-PWSPALA 93
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R GG I A A E G A N+ GFHH AD G GFC + + + + A V+ I
Sbjct: 94 GAVRFTNGGCIAAVSAALEEGIAGNLASGFHHAHADHGEGFCTFNGLVVAMERARVEGRI 153
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
R +++D+D H GNG +S + L ++
Sbjct: 154 RRALVVDMDLHYGNGTASLLASRPWAFALSIYG 186
>gi|403378927|ref|ZP_10920984.1| acetoin utilization protein AcuC [Paenibacillus sp. JC66]
Length = 401
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IY PD ++++ ++ HPF+ ++ L G L ++ I++P AS+ ++ VH
Sbjct: 7 FIYDPD-ELNYRFSDE-HPFNQTRLEVTIDLLKQVGALTEDAILKPRIASESEIKAVHLP 64
Query: 97 SYLKSLQ--SSPN---------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
Y+ +++ S+PN ++ F + +L VGG++ AA+
Sbjct: 65 EYVNAVKALSAPNPTDEAVRAAAKWGLQDEDTPFFTGMHEKTSLL------VGGSLKAAE 118
Query: 146 --LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
++ + A+++GGG HH ++G GFC Y D S+ I + N +RV+ ID D H G
Sbjct: 119 VVMSGQAEHALHLGGGLHHALPNKGAGFCVYNDASITIEWIRRNYN-ARVLYIDTDVHHG 177
Query: 204 NGHEKDFSSDSRVYILDMFNPGIY 227
+G + F +D V + G Y
Sbjct: 178 DGVQWTFYTDPDVCTFSIHETGKY 201
>gi|16080023|ref|NP_390849.1| protein deacetylase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310915|ref|ZP_03592762.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315242|ref|ZP_03597047.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221320159|ref|ZP_03601453.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324440|ref|ZP_03605734.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777128|ref|YP_006631072.1| protein deacetylase [Bacillus subtilis QB928]
gi|452915179|ref|ZP_21963805.1| acetoin utilization protein AcuC [Bacillus subtilis MB73/2]
gi|728801|sp|P39067.1|ACUC_BACSU RecName: Full=Acetoin utilization protein AcuC
gi|348050|gb|AAA68284.1| acetoin utilization protein [Bacillus subtilis]
gi|2293316|gb|AAC00394.1| acetoin catabolism protein AcuC [Bacillus subtilis]
gi|2635455|emb|CAB14949.1| protein deacetylase [Bacillus subtilis subsp. subtilis str. 168]
gi|402482308|gb|AFQ58817.1| Protein deacetylase [Bacillus subtilis QB928]
gi|407960983|dbj|BAM54223.1| protein deacetylase [Synechocystis sp. PCC 6803]
gi|407965813|dbj|BAM59052.1| protein deacetylase [Bacillus subtilis BEST7003]
gi|452115527|gb|EME05923.1| acetoin utilization protein AcuC [Bacillus subtilis MB73/2]
Length = 387
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 176 VQFTFYDNPDVCTLSIHETGRY 197
>gi|330811883|ref|YP_004356345.1| histone deacetylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699453|ref|ZP_17673943.1| histone deacetylase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|327379991|gb|AEA71341.1| Putative histone deacetylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996896|gb|EIK58226.1| histone deacetylase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 306
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPSLCPPDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y++ S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHDRAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G
Sbjct: 109 HGLACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLASGRVSRVLIFDCDVHQGDG 164
>gi|239637943|ref|ZP_04678904.1| acetoin utilization protein AcuC [Staphylococcus warneri L37603]
gi|239596506|gb|EEQ79042.1| acetoin utilization protein AcuC [Staphylococcus warneri L37603]
Length = 386
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L FL I+EP A+ +++ ++H Y+++++ + + + E
Sbjct: 24 HPFNQMRLKLTTELLLDAQFLTNENILEPRIATDDEIGLIHKYDYIQAIKHASHGILSAE 83
Query: 114 VPPVALFPNCLVQRKVLYPFR-------KQVGGTI-LAAKLAKERGWAIN---VGGGFHH 162
F V PFR + VGG + LA K+ G IN +GGG HH
Sbjct: 84 EAKKYGFNEDTV------PFRHMHRHCARIVGGALNLADKIMD--GTYINGCHLGGGLHH 135
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
A GFC Y D+++ Y N RVMIID DAH G+G + F + + V +
Sbjct: 136 ALAGRANGFCIYNDVAITAQYLVHHYN-QRVMIIDTDAHHGDGTQWSFYTSNDVLTYSIH 194
Query: 223 NPG 225
G
Sbjct: 195 ETG 197
>gi|418031836|ref|ZP_12670319.1| acetoin dehydrogenase A [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|351470699|gb|EHA30820.1| acetoin dehydrogenase A [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 396
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 15 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTD 72
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 127 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 184
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 185 VQFTFYDNPDVCTLSIHETGRY 206
>gi|300703916|ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum CFBP2957]
gi|299071579|emb|CBJ42903.1| Histone deacetylase [Ralstonia solanacearum CFBP2957]
Length = 324
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLHEAPRAGDDALLLAHAPDYVHAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSSAMVERS-----RRSAGATMAACEAAMADGTAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIASRW--MQRRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTLSLHGE 185
Query: 225 GIYP 228
YP
Sbjct: 186 KNYP 189
>gi|430757195|ref|YP_007208524.1| Acetoin utilization protein AcuC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430021715|gb|AGA22321.1| Acetoin utilization protein AcuC [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 387
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P AS+E+L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 176 VQFTFYDNPDVCTLSIHETGRY 197
>gi|88801602|ref|ZP_01117130.1| Histone deacetylase superfamily protein [Polaribacter irgensii
23-P]
gi|88782260|gb|EAR13437.1| Histone deacetylase superfamily protein [Polaribacter irgensii
23-P]
Length = 300
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
K H F K+ + Q L EG + EP + + VH Y L N+++
Sbjct: 16 KGHRFPMEKYDLLPQQLLYEGTCTEENFFEPEIPNYKHFFTVHDPEYFFDLL---NITLS 72
Query: 112 IEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ FP L+ R+++ GT+ A++ A + G A+N+ GG HH ++ G
Sbjct: 73 QKAARKIGFPLSEVLIAREMMI-----ADGTMKASEYAIKNGIAMNIAGGTHHAFSNRGE 127
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
FC D ++ Y + +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 128 AFCMLNDQAIGAKYLQQKGLADKILIVDLDVHQGNGTAEIFQNDRSVFTFSMHGKSNYPF 187
Query: 230 DYEA 233
EA
Sbjct: 188 VKEA 191
>gi|21283407|ref|NP_646495.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49486560|ref|YP_043781.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|297207553|ref|ZP_06923988.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911634|ref|ZP_07129078.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH70]
gi|418934694|ref|ZP_13488516.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418988791|ref|ZP_13536463.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1835]
gi|448740449|ref|ZP_21722428.1| acetoin utilization protein [Staphylococcus aureus KT/314250]
gi|38604907|sp|Q8NW34.1|ACUC_STAAW RecName: Full=Acetoin utilization protein AcuC
gi|81649144|sp|Q6G8J2.1|ACUC_STAAS RecName: Full=Acetoin utilization protein AcuC
gi|21204847|dbj|BAB95543.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49245003|emb|CAG43464.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887570|gb|EFH26468.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887055|gb|EFK82256.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH70]
gi|377717884|gb|EHT42059.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377770788|gb|EHT94549.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC128]
gi|445548933|gb|ELY17180.1| acetoin utilization protein [Staphylococcus aureus KT/314250]
Length = 389
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|348540609|ref|XP_003457780.1| PREDICTED: histone deacetylase 8-like [Oreochromis niloticus]
Length = 379
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ +YSP+Y + + K+ ++ + + + G L IV+P A+ E++
Sbjct: 17 RVAYVYSPEYIQTCDTLSKV----PNRASMVHSLIEAYGLLQHMSIVKPHVATIEEMAKF 72
Query: 94 HSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK---LAK 148
H++SYL+ L S + + L +C V + + + VGG L A L +
Sbjct: 73 HTDSYLEHLHKISQDGDNDDPQSADYGLGYDCPVVEGI-FDYAAGVGGATLTAAQTLLDQ 131
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ AIN GG+HH DE GFC D L I ++ RV+ +D+D H G+G E
Sbjct: 132 KCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI--LRLREKYERVLYVDVDLHHGDGVED 189
Query: 209 DFSSDSRVYILDM--FNPGIYP 228
FS S+V + + F+PG +P
Sbjct: 190 AFSFTSKVMTVSLHKFSPGFFP 211
>gi|167035768|ref|YP_001670999.1| histone deacetylase superfamily protein [Pseudomonas putida GB-1]
gi|166862256|gb|ABZ00664.1| histone deacetylase superfamily [Pseudomonas putida GB-1]
Length = 304
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLAAGRVHRVLIFDCDVHQGDG 164
>gi|398938902|ref|ZP_10668169.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
gi|398164896|gb|EJM53021.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
Length = 306
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDG 164
>gi|421497632|ref|ZP_15944790.1| histone deacetylase/AcuC/AphA family protein [Aeromonas media WS]
gi|407183367|gb|EKE57266.1| histone deacetylase/AcuC/AphA family protein [Aeromonas media WS]
Length = 298
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ I Q L++ G+ + E AS+E +
Sbjct: 1 MSLRIFYHPYY--SSLTLPERHRFPLAKYQAIYQHLAALGY----PLAEAPAASREQIAR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH Y+++ + I P L++R + + VG T+ A++ A E+G
Sbjct: 55 VHDADYVEAALTGQLEREAIRRLGFPWSP-MLIERTL-----RSVGATVAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+ + GG+HH D G GFC + D+ + + + +V+I+DLD HQG+G
Sbjct: 109 GLQISGGYHHAHRDFGSGFCLFNDLVIAARACLDEGSCEQVLIVDLDVHQGDG 161
>gi|343517076|ref|ZP_08754091.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. N418]
gi|342794575|gb|EGU30338.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. N418]
Length = 305
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE---GFLDKNCIVEPLEASKEDLL 91
+P+IY P Y S L + + H + K+ + L+ + + ++ + +P ++ +
Sbjct: 2 IPVIYHPIY--SQLSLPEGHRYPIDKYRLLYHALTDKMQGEWANRFMVFQPKPLTQATIS 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
H Y+ +L + +P V + FP L++R GGT L +
Sbjct: 60 QYHCSDYIDALVNG-------RLPAVKMRRIGFPWSEALIERTF-----TSAGGTWLTTQ 107
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E+G AI++ GG+HH D G GFC D+ L A I RV+I+D D H G+G
Sbjct: 108 LAIEQGIAIHLSGGYHHAHYDFGSGFCLINDLVLSAKQALTLEKIDRVLIVDSDVHHGDG 167
Query: 206 HEKDFSSDSRVYIL 219
S D R+ L
Sbjct: 168 TATMCSDDERIITL 181
>gi|442317607|ref|YP_007357628.1| histone deacetylase family protein [Myxococcus stipitatus DSM
14675]
gi|441485249|gb|AGC41944.1| histone deacetylase family protein [Myxococcus stipitatus DSM
14675]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+ Y Y + GIE + +L + + + P S +L VH
Sbjct: 21 IFYDEAYRLPLTGIENTVGVEPRGVDFTTWYLLEKHVVRPADVYRPRPVSYAELSRVHDA 80
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWAIN 155
+YL+SL ++ I V P + + L+ R GGT+ AA+LA RG +N
Sbjct: 81 AYLESLGRPETLARIYAVDPSEVPVDTLLSN-----VRLVCGGTLGAARLAFGRRGPVVN 135
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
+ GGFHH + GGGFCA DI++ + + +++DLDAH +G + + + +
Sbjct: 136 MAGGFHHAAPGRGGGFCAVNDIAVALASLQSDGYEGQTVVLDLDAHPPDGTAECLAGNPK 195
Query: 216 VYI 218
V+I
Sbjct: 196 VWI 198
>gi|441518098|ref|ZP_20999825.1| putative acetoin utilization protein [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454993|dbj|GAC57786.1| putative acetoin utilization protein [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 405
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------P 106
HP + + + G LD ++EP A+ DLL VH+ Y+++++ + P
Sbjct: 25 HPMNPIRLELTMELAGCLGILDGATLIEPAAAADSDLLRVHAPDYVQAVKDAVPSSWDEP 84
Query: 107 N-VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+ I E PV FP ++ GGT+ AA+ A ++++GGG HH
Sbjct: 85 DEFGIGGEDNPV--FPGMHAASAMI------AGGTLQAAREIAAGRVQRSVSIGGGMHHA 136
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
GFC Y D+++ I + + SR+ ID+D H G+G E F D RV +
Sbjct: 137 MPSSTAGFCVYNDVAVAIAW-LLDNGFSRIAYIDVDVHHGDGVECAFRDDPRVLTV 191
>gi|86134858|ref|ZP_01053440.1| deacetylase [Polaribacter sp. MED152]
gi|85821721|gb|EAQ42868.1| deacetylase [Polaribacter sp. MED152]
Length = 300
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG EP + VH Y L N+++ +
Sbjct: 18 HRFPMIKYDLLPEQLIYEGTCSLENFFEPEIPDNKHFFTVHEPDYFFDLL---NITLDQK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+++ GT+ A++ A G A+N+ GG HH ++ G F
Sbjct: 75 AARKIGFPLSEVLIEREMVI-----ADGTMKASEFALRNGIAMNIAGGTHHAFSNRGEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
C D ++ Y + + +V+I+DLD HQGNG + F++D+ V+ M YP
Sbjct: 130 CMLNDQAIAAKYLQHKNLVKKVLIVDLDVHQGNGTAEIFANDNSVFTFSMHGKSNYP 186
>gi|421888007|ref|ZP_16319126.1| Histone deacetylase [Ralstonia solanacearum K60-1]
gi|378966642|emb|CCF95874.1| Histone deacetylase [Ralstonia solanacearum K60-1]
Length = 324
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 22/189 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLYEAPRAGDDALLLAHAPDYVHAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSPAMVERS-----RRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIASRW--MQRRPGRAQEDFPVAIVDLDVHQGNGTASILRDDASVFTLSLHGE 185
Query: 225 GIYPRDYEA 233
YP EA
Sbjct: 186 KNYPFRKEA 194
>gi|332706616|ref|ZP_08426677.1| putative deacetylase [Moorea producens 3L]
gi|332354500|gb|EGJ33979.1| putative deacetylase [Moorea producens 3L]
Length = 283
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPP 116
K+G++ Q L E P E L +VH+ +Y+++ P I +P
Sbjct: 3 KFGKLYQLLLQEDIATPKQFHTPDLPPLEWLHLVHTPAYVQAYYEGTLDPKAVRRIGLP- 61
Query: 117 VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
+ LV+R VGGTIL AKLA +G A N GG HH + G GFC + D
Sbjct: 62 ---WSPALVKRTC-----TAVGGTILTAKLALSQGLACNTAGGTHHAFPNYGSGFCIFND 113
Query: 177 ISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
+++ QL + +++I+DLD HQG+G F ++ V+ M
Sbjct: 114 LAIASR-VLQQLGLVQKILIVDLDVHQGDGTAFIFQNEHSVFTFSM 158
>gi|229513698|ref|ZP_04403160.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TMA
21]
gi|229348879|gb|EEO13836.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TMA
21]
Length = 306
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|384083397|ref|ZP_09994572.1| histone deacetylase superfamily protein [gamma proteobacterium
HIMB30]
Length = 308
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP+++ Y F H F +K+ + +++ + +V P+ + L+
Sbjct: 3 RLPIVWDAGYSPVF---PDSHRFPMAKFRLLKEWVDHH--VPTTELVTPIPCPTDVLMET 57
Query: 94 HSESYLKSLQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ QS S N I E+ + L R L +GGT+ +LAK G
Sbjct: 58 HDPDYVSGFQSGSLNAKAIREIG--LPWSEGLRDRTNL-----ALGGTMRTCELAKTYGL 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D G GFC Y D+++ Y Q SRV+I D D HQG+G +
Sbjct: 111 ASHLAGGTHHAHYDRGSGFCIYNDLAVSARYLVNQGLASRVLIFDCDVHQGDGTASILAH 170
Query: 213 DSRVYILDMFNPGIYP 228
DS+ + + +P
Sbjct: 171 DSQTFTCSIHAEKNFP 186
>gi|94498520|ref|ZP_01305076.1| hypothetical protein SKA58_04476 [Sphingomonas sp. SKA58]
gi|94422063|gb|EAT07108.1| hypothetical protein SKA58_04476 [Sphingomonas sp. SKA58]
Length = 301
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G + P +E + VH +Y+ + I + VPP +
Sbjct: 28 KYGLVMDALTESGT--AMTVHTPEVMPREWIEAVHDPAYVDEV-------ISLSVPPEKM 78
Query: 120 ----FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
FP + + R +L P GGT AA+LAK G+A N GG HH D G G+C
Sbjct: 79 RRIGFPITDRVATRSLLSP-----GGTWAAARLAKIHGYAANAAGGSHHALHDTGAGYCV 133
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ D+++ + + ++I+DLD HQG+G + + V+ L + +P +A
Sbjct: 134 FNDLAIAATRLIAEGDAKHILILDLDVHQGDGTAALMAGRTDVFTLSIHAERNFPV-RKA 192
Query: 234 RRFIDQKVEVVVNNQ 248
R +D +E +++
Sbjct: 193 RSSLDIGLEDGIDDH 207
>gi|116620212|ref|YP_822368.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116223374|gb|ABJ82083.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 305
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 24/199 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+Y YD++ LG E + P +W R +F ++E F V P A+ +D+ +
Sbjct: 6 FVYHDRYDLN-LG-EHVFPSQKFRWLRDRLLHTRFAAAEDF------VTPESATDDDVRL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ L+ S + +E+P R+++ F GG+ILAA+LA +
Sbjct: 58 VHDPEYVAKLRGGTLSYQDILRLEIP---------YSRQMVEAFWLAAGGSILAARLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N+GGGFHH G GFCA D+++ + I R M++D D H GNG
Sbjct: 109 DGIGFNIGGGFHHAFPGHGEGFCAINDVAIAVRRLQADRLIKRAMVVDCDVHHGNGTAAI 168
Query: 210 FSSDSRVYILDMFNPGIYP 228
F+ D V+ L + YP
Sbjct: 169 FTDDQSVFTLSIHQFNNYP 187
>gi|386333349|ref|YP_006029518.1| deacetylase [Ralstonia solanacearum Po82]
gi|334195797|gb|AEG68982.1| Deacetylase [Ralstonia solanacearum Po82]
Length = 324
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 22/189 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLHEAPRAGDDALLLAHAPDYIDAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSPAMVERS-----RRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIAARW--MQRRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTLSVHGE 185
Query: 225 GIYPRDYEA 233
YP EA
Sbjct: 186 KNYPFRKEA 194
>gi|34497781|ref|NP_901996.1| histone deacetylase/AcuC/AphA family protein [Chromobacterium
violaceum ATCC 12472]
gi|34103637|gb|AAQ59998.1| probable histone deacetylase/AcuC/AphA family protein
[Chromobacterium violaceum ATCC 12472]
Length = 302
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 122 NCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ QR++ P+ R+ VG T+ A++ A G +N+ GG HH + G GFC
Sbjct: 68 DARAQREIGLPWSPELAERSRRSVGATVAASRSALLEGCGVNLAGGTHHAGRERGSGFCM 127
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ DI++ + + RV+I+DLD HQG+G + + R++ M +P
Sbjct: 128 FNDIAVASMLLLAEARVRRVLIVDLDVHQGDGTAAIAADEPRIFTFSMHGARNFP 182
>gi|392540847|ref|ZP_10287984.1| histone deacetylase [Pseudoalteromonas piscicida JCM 20779]
Length = 301
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y +Y +F + H F SK+ R+ Q + + G + N + P + L V
Sbjct: 5 NLPLVYHANYSFNF---DPKHRFVMSKFARLYQEVDALGLIHNN-VYSPEPGNPSPLESV 60
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E Y+ L Q + I +P + L+ R P GT+ A+LA +
Sbjct: 61 HCEQYVWDLWRNQLDAKMMRHIGLP----WSEQLMARTFTAPL-----GTLKTAELALKH 111
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G GFC D++ + I+ +I DLD HQG+G
Sbjct: 112 GIACHLAGGTHHAHYDFGSGFCMVNDLAFTATHLLENNQITNALIFDLDVHQGDGTAAML 171
Query: 211 SSDSRVY 217
+ VY
Sbjct: 172 KHNPYVY 178
>gi|258424149|ref|ZP_05687031.1| acetoin utilization protein acuC [Staphylococcus aureus A9635]
gi|417890091|ref|ZP_12534170.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21200]
gi|418283968|ref|ZP_12896702.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21202]
gi|418306587|ref|ZP_12918368.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21194]
gi|418889537|ref|ZP_13443670.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845770|gb|EEV69802.1| acetoin utilization protein acuC [Staphylococcus aureus A9635]
gi|341855784|gb|EGS96628.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21200]
gi|365165363|gb|EHM57151.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21202]
gi|365246497|gb|EHM87045.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21194]
gi|377753045|gb|EHT76963.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 389
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFRHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|187929021|ref|YP_001899508.1| histone deacetylase superfamily protein [Ralstonia pickettii 12J]
gi|187725911|gb|ACD27076.1| histone deacetylase superfamily [Ralstonia pickettii 12J]
Length = 334
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y++++ + + P QR++ +P+
Sbjct: 57 EAPRADDDALLLAHTSEYVEAVSAG-------RLDPAR-------QREIGFPWSPEMVER 102
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 103 SRRSAGATMAACEAALADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGR 160
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 161 TPANFPVAIVDLDVHQGNGTASILRDDAAVFTLSLHGEKNYPFRKEA 207
>gi|418316815|ref|ZP_12928246.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418875664|ref|ZP_13429920.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC93]
gi|365240216|gb|EHM80998.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21340]
gi|377769736|gb|EHT93504.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|253732384|ref|ZP_04866549.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253734481|ref|ZP_04868646.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH130]
gi|282916995|ref|ZP_06324753.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus D139]
gi|283770813|ref|ZP_06343705.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus H19]
gi|384550550|ref|YP_005739802.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|418312977|ref|ZP_12924476.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21334]
gi|418562627|ref|ZP_13127084.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21262]
gi|418600111|ref|ZP_13163582.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21343]
gi|418645848|ref|ZP_13207965.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|421148391|ref|ZP_15608051.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|443638504|ref|ZP_21122543.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21196]
gi|253723906|gb|EES92635.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253727535|gb|EES96264.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH130]
gi|282319482|gb|EFB49834.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus D139]
gi|283460960|gb|EFC08050.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus H19]
gi|302333399|gb|ADL23592.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|365236987|gb|EHM77860.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21334]
gi|371973731|gb|EHO91079.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21262]
gi|374395267|gb|EHQ66537.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21343]
gi|375022154|gb|EHS15641.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|394331534|gb|EJE57617.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|443409013|gb|ELS67518.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21196]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|242012327|ref|XP_002426884.1| histone deacetylase, putative [Pediculus humanus corporis]
gi|212511113|gb|EEB14146.1| histone deacetylase, putative [Pediculus humanus corporis]
Length = 378
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSIIIEVPPVALFP-- 121
+SS L + + + EA+ EDL HS Y LK +Q+S ++ ++ +A F
Sbjct: 35 LISSYNLLSQCEVCKCEEATLEDLSSFHSFEYIEILKKIQNSSDLEDMMNCSEIADFNLG 94
Query: 122 -NCLVQRKVLYPFRKQVGGTILAA------KLAKERGWAINVGGGFHHCSADEGGGFCAY 174
+C + +L F K + G+ L A K + +IN GG+HH DE GGFC
Sbjct: 95 YDCPLFEGIL-DFVKLIAGSSLTAAKKLIKKYMQNIPISINWFGGWHHAQRDEAGGFCYV 153
Query: 175 ADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
DI + I Y R++ IDLD H GNG E F RV + + PG +P
Sbjct: 154 NDIVIAIQYLLKFF--KRILYIDLDVHHGNGVENAFIFSPRVLTFSIHKYEPGYFP 207
>gi|89889818|ref|ZP_01201329.1| deacetylase [Flavobacteria bacterium BBFL7]
gi|89518091|gb|EAS20747.1| deacetylase [Flavobacteria bacterium BBFL7]
Length = 308
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLE-ASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F K+ + Q L EG ++ EP + S D+L VH+ YLK+L++ +++
Sbjct: 19 HRFPMVKYELLPQQLLLEGTANQTDFFEPSKLCSDTDVLRVHTSEYLKNLKA---LNLDR 75
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP N LV+R+ LY + + G I A E A+N+ GG HH D G
Sbjct: 76 KAARKLGFPLNNQLVERE-LYIAQGTIDGCIKAF----EYNIAMNIAGGTHHAYTDHGEA 130
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC D ++ Y +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 131 FCLLNDQAIAARYIQHHQLADKILIVDLDVHQGNGTAEIFRNDDSVFTFSMHGASNYP 188
>gi|443632316|ref|ZP_21116496.1| acetoin utilization protein AcuC [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348431|gb|ELS62488.1| acetoin utilization protein AcuC [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 388
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + D IV P A++E+L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVSPRLAAEEELALVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGGGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 176 VQFTFYDNPDVCTLSIHETGRY 197
>gi|421523855|ref|ZP_15970482.1| histone deacetylase superfamily protein, partial [Pseudomonas
putida LS46]
gi|402752100|gb|EJX12607.1| histone deacetylase superfamily protein, partial [Pseudomonas
putida LS46]
Length = 182
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|417653456|ref|ZP_12303187.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21193]
gi|329733147|gb|EGG69484.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21193]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|156743387|ref|YP_001433516.1| histone deacetylase superfamily protein [Roseiflexus castenholzii
DSM 13941]
gi|156234715|gb|ABU59498.1| histone deacetylase superfamily [Roseiflexus castenholzii DSM
13941]
Length = 297
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L YS + L + + H F +K+ + + ++EG D ++ P A LL H
Sbjct: 1 MKLFYSDSF---VLPLPEGHRFPIAKYALLRERAAAEGLGD---LILPEAADDRTLLRAH 54
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWA 153
+ YL +++ + P+ L++R R+ VG TI A + A G+A
Sbjct: 55 TADYLHRIKTGAISDREMRQIGFPWSPH-LIERS-----RRSVGATIAACRAALSGDGFA 108
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG HH AD G G+C + D + + + RV+IID D HQGNG + D
Sbjct: 109 ANLAGGTHHAFADHGEGYCVFNDSVIAARAMQAEGRVRRVVIIDCDVHQGNGIAAILTGD 168
Query: 214 SRVYILDMFNPGIYP 228
++ + YP
Sbjct: 169 DTIFSFSIHGSRNYP 183
>gi|37679340|ref|NP_933949.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
YJ016]
gi|37198083|dbj|BAC93920.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
YJ016]
Length = 312
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SRLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +Q+
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEQLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHASVDKVLIIDS 164
Query: 199 DAHQGNG 205
D H G+G
Sbjct: 165 DVHHGDG 171
>gi|212638308|ref|YP_002314828.1| Histone deacetylase, involved in acetoin utilization [Anoxybacillus
flavithermus WK1]
gi|212559788|gb|ACJ32843.1| Histone deacetylase family protein, involved in acetoin utilization
[Anoxybacillus flavithermus WK1]
Length = 399
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP------- 106
HPF+ + L + G L IV P A+ E+L ++H Y+++++ +
Sbjct: 31 HPFNQLRVKLTYDLLQTLGALHDEQIVAPRLATDEELALIHDVDYIEAVKKAGKGQLSED 90
Query: 107 ---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N + E P+ FPN +L VGGT+ A L+ + A+++GGG H
Sbjct: 91 VALNYGLGTEDTPI--FPNMHEASALL------VGGTLTAVDYVLSGKAEHALSLGGGLH 142
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D S+ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 143 HGFRGKASGFCIYNDSSVAIKYMQEKYGV-RVLYVDTDAHHGDGVQWTFYDDPNVCTFSI 201
Query: 222 FNPGIY 227
G Y
Sbjct: 202 HETGRY 207
>gi|387780810|ref|YP_005755608.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177912|emb|CCC88392.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus LGA251]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DAAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|339489485|ref|YP_004704013.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
gi|338840328|gb|AEJ15133.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
Length = 304
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLIDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SY++ + ++S + + L +R V + VGG++L+A++A ++G A
Sbjct: 60 DRSYIERYMNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLSAEMALQQGIAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 114 HLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|418321408|ref|ZP_12932754.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|365225640|gb|EHM66883.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus VCU006]
Length = 375
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|379021512|ref|YP_005298174.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
subsp. aureus M013]
gi|417899283|ref|ZP_12543190.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21259]
gi|341846087|gb|EGS87285.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21259]
gi|359830821|gb|AEV78799.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
subsp. aureus M013]
Length = 375
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|416839583|ref|ZP_11902964.1| acetoin utilization protein [Staphylococcus aureus O11]
gi|323440721|gb|EGA98430.1| acetoin utilization protein [Staphylococcus aureus O11]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|334343955|ref|YP_004552507.1| histone deacetylase [Sphingobium chlorophenolicum L-1]
gi|334100577|gb|AEG48001.1| Histone deacetylase [Sphingobium chlorophenolicum L-1]
Length = 305
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P ++V GGT LAA+LA G+A N GG HH AD G G+C + D+
Sbjct: 74 ERRIGFPVTERVMRRSMLSPGGTWLAARLAMRHGYAANAAGGSHHALADTGAGYCVFNDL 133
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ + + R++I+DLD HQG+G
Sbjct: 134 AIAANRLIAEGEARRILILDLDVHQGDG 161
>gi|388466851|ref|ZP_10141061.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
gi|388010431|gb|EIK71618.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
Length = 306
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTQDSQLLRPQLCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 EPGYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y ++RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISRYLLASGRVNRVLIFDCDVHQGDG 164
>gi|417897377|ref|ZP_12541313.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21235]
gi|341839723|gb|EGS81288.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21235]
Length = 388
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 24 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 82
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 83 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 141
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 142 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 198
>gi|57652033|ref|YP_186618.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus COL]
gi|87160179|ref|YP_494375.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195547|ref|YP_500353.1| hypothetical protein SAOUHSC_01849 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221840|ref|YP_001332662.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509951|ref|YP_001575610.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142370|ref|ZP_03566863.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|258450871|ref|ZP_05698924.1| acetoin utilization protein acuC [Staphylococcus aureus A5948]
gi|282924425|ref|ZP_06332098.1| acetoin utilization protein acuC [Staphylococcus aureus A9765]
gi|284024782|ref|ZP_06379180.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus 132]
gi|294849896|ref|ZP_06790635.1| acetoin utilization protein acuC [Staphylococcus aureus A9754]
gi|304380670|ref|ZP_07363341.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014934|ref|YP_005291170.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VC40]
gi|384862331|ref|YP_005745051.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384870273|ref|YP_005752987.1| Acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus T0131]
gi|385782009|ref|YP_005758180.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus 11819-97]
gi|387143330|ref|YP_005731723.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus TW20]
gi|415688103|ref|ZP_11451870.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CGS01]
gi|417649583|ref|ZP_12299380.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21189]
gi|418281270|ref|ZP_12894084.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418284413|ref|ZP_12897135.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418318145|ref|ZP_12929557.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418571361|ref|ZP_13135596.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21283]
gi|418572397|ref|ZP_13136608.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21333]
gi|418643298|ref|ZP_13205473.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|418647053|ref|ZP_13209133.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418651151|ref|ZP_13213161.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418659599|ref|ZP_13221263.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|418906673|ref|ZP_13460698.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418925985|ref|ZP_13479887.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418929075|ref|ZP_13482961.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418947481|ref|ZP_13499848.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418953860|ref|ZP_13505845.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|419774089|ref|ZP_14300070.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|422742902|ref|ZP_16796901.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745031|ref|ZP_16798980.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785618|ref|ZP_18212419.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
CN79]
gi|440708377|ref|ZP_20889044.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21282]
gi|440735175|ref|ZP_20914785.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448745121|ref|ZP_21726990.1| acetoin utilization protein AcuC [Staphylococcus aureus KT/Y21]
gi|81694282|sp|Q5HF39.1|ACUC_STAAC RecName: Full=Acetoin utilization protein AcuC
gi|57286219|gb|AAW38313.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus COL]
gi|87126153|gb|ABD20667.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203105|gb|ABD30915.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374640|dbj|BAF67900.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368760|gb|ABX29731.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257861407|gb|EEV84215.1| acetoin utilization protein acuC [Staphylococcus aureus A5948]
gi|269941213|emb|CBI49601.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus TW20]
gi|282592926|gb|EFB97929.1| acetoin utilization protein acuC [Staphylococcus aureus A9765]
gi|294823235|gb|EFG39665.1| acetoin utilization protein acuC [Staphylococcus aureus A9754]
gi|302751560|gb|ADL65737.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340777|gb|EFM06706.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315197202|gb|EFU27541.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141678|gb|EFW33513.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143832|gb|EFW35605.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329314408|gb|AEB88821.1| Acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus T0131]
gi|329726976|gb|EGG63433.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21189]
gi|364522998|gb|AEW65748.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365165595|gb|EHM57379.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21178]
gi|365173435|gb|EHM63998.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21209]
gi|365244037|gb|EHM84703.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21232]
gi|371980363|gb|EHO97572.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21283]
gi|371984450|gb|EHP01562.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21333]
gi|374363631|gb|AEZ37736.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VC40]
gi|375014661|gb|EHS08338.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026527|gb|EHS19908.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375031072|gb|EHS24362.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375034824|gb|EHS27973.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|375374219|gb|EHS77859.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|375375718|gb|EHS79284.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|377738987|gb|EHT62996.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745054|gb|EHT69031.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377762578|gb|EHT86440.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|383972120|gb|EID88171.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|421956114|gb|EKU08444.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
CN79]
gi|436430924|gb|ELP28279.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505051|gb|ELP41007.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21282]
gi|445561561|gb|ELY17758.1| acetoin utilization protein AcuC [Staphylococcus aureus KT/Y21]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|332184978|ref|ZP_08386727.1| histone deacetylase domain protein [Sphingomonas sp. S17]
gi|332014702|gb|EGI56758.1| histone deacetylase domain protein [Sphingomonas sp. S17]
Length = 307
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 76 KNCIVEPLEASKEDLLVVHSE----SYLKSLQSSPNVSIIIE--VPPVAL----FPNCLV 125
I + L A ED++ E ++L+++ V+ ++E VPP FP V
Sbjct: 25 NGAIRDLLRARGEDIVWTEPELIPPAWLEAVHDPDYVAEVLEARVPPEKTRRIGFP---V 81
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
+V Y R GGT AA LA E G+A N GG HH AD G G+C + D+++
Sbjct: 82 TEQVAYRARAVPGGTWTAAMLALEHGFAANTAGGSHHALADTGAGYCVFNDLAVAAVRLV 141
Query: 186 VQLNISRVMIIDLDAHQGNG 205
+ +SR+ I+D D HQG+G
Sbjct: 142 EEGIVSRIAIVDCDVHQGDG 161
>gi|83745862|ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551]
gi|83727552|gb|EAP74673.1| Deacetylase [Ralstonia solanacearum UW551]
Length = 324
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 44 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 94
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 95 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARW--MQRRPGRAPGDF 152
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 153 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEA 194
>gi|417903139|ref|ZP_12546994.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21269]
gi|341850313|gb|EGS91437.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21269]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|343926978|ref|ZP_08766466.1| putative acetoin utilization protein [Gordonia alkanivorans NBRC
16433]
gi|343763036|dbj|GAA13392.1| putative acetoin utilization protein [Gordonia alkanivorans NBRC
16433]
Length = 418
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD V P + L VH+ Y+ ++++ + + +
Sbjct: 24 HPMNPVRLALTMTLAQSLGVLDDVETVPPQAIDDDALTAVHTRDYIDAVRAVGSGTASLS 83
Query: 114 VPPVA-LFPNCLVQRKVLYPF----RKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF V R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 84 GPLLERLFGLGDADNPVFAGMHEAARLLVGGTLAAAQTVASGAATR--AVNIGGGMHHAM 141
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I Y + R+ ID+DAH G+G + +F++D RV + +
Sbjct: 142 KARAAGFCIYNDCAIAIRY-LLDKGFDRIAYIDVDAHHGDGVQVEFAADPRVMTVSL 197
>gi|196006159|ref|XP_002112946.1| hypothetical protein TRIADDRAFT_25928 [Trichoplax adhaerens]
gi|190584987|gb|EDV25056.1| hypothetical protein TRIADDRAFT_25928 [Trichoplax adhaerens]
Length = 366
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV----SIIIEVPPVALFP 121
+ + +DK + P AS E++ HS ++ +LQ+ N I E+ L
Sbjct: 36 HLIQAYNLVDKMKVARPKPASIEEICAFHSSDFVNTLQACHNFDMEDEITSEMTEYGLGY 95
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISL 179
+C + V GGTI AA+L R AIN GG+HH D GFC D+ L
Sbjct: 96 DCPLFPDVFSYASFVTGGTITAARLLTSRCCSIAINWFGGWHHAKRDMASGFCYCNDVVL 155
Query: 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
+ + ++ +++ IDLD H G+G E F +V+ L + PG +P
Sbjct: 156 GVLH--LKTVFDKILYIDLDLHHGDGVEDAFLMTDKVFTLSFHKYAPGFFP 204
>gi|207742992|ref|YP_002259384.1| hypothetical protein RSIPO_01159 [Ralstonia solanacearum IPO1609]
gi|206594389|emb|CAQ61316.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 302
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 22 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 72
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 73 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARW--MQRRPGRAPGDF 130
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 131 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEA 172
>gi|359449448|ref|ZP_09238941.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20480]
gi|358044758|dbj|GAA75190.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20480]
Length = 299
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + GFL +P +A L + H
Sbjct: 1 MQLYYHPLY--SNLPLPEKHRFPIQKYQRLKTEIEHLGFL-PTAFKQPAKARPSQLALCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + + N+S + LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEQYINNFLTG-NLSDKAIKKMGFPYSAQLVERTLL-----SVGGSIQAAEEALKSGLTC 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + + S
Sbjct: 112 NLSGGYHHAYSDYGSGFCIFNDLAIAATHLLNTHKAKTVLIFDCDVHQGDGTAQIINQQS 171
Query: 215 RVYIL 219
I+
Sbjct: 172 HKNII 176
>gi|386831332|ref|YP_006237986.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417799844|ref|ZP_12446976.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21310]
gi|418655462|ref|ZP_13217317.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|334272376|gb|EGL90741.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21310]
gi|375036820|gb|EHS29883.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|385196724|emb|CCG16354.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|418560500|ref|ZP_13125015.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418994454|ref|ZP_13542089.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG290]
gi|371972060|gb|EHO89451.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21252]
gi|377744251|gb|EHT68229.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG290]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|46198412|ref|YP_004079.1| T-histone deacetylase [Thermus thermophilus HB27]
gi|46196034|gb|AAS80452.1| putative T-histone deacetylase [Thermus thermophilus HB27]
Length = 375
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G + HPF + + L + G + P EAS+E++L VHSE
Sbjct: 2 VIYREEYRLYNFGPD--HPFSPVRLEMLTSLLQALGVW--RAPLSPPEASREEVLSVHSE 57
Query: 97 SYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--LA 147
+K ++++ + ++ L FP ++L VGGT+ A+ LA
Sbjct: 58 RLVKRVEAASRGELYPDLEHYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRILA 111
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCI-HYAFVQLNISRVMIIDLDAHQGNGH 206
E+ + +GGG HH D GFC Y D+S+ I H L RV +D+D H G+G
Sbjct: 112 GEKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTRAGL---RVAYVDIDVHHGDGV 167
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ + V L + G Y
Sbjct: 168 QWIHYEEGEVLTLSLHESGRY 188
>gi|418455153|ref|ZP_13026410.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458029|ref|ZP_13029227.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS11b]
gi|387744083|gb|EIK30855.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387746150|gb|EIK32884.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS11b]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|418950362|ref|ZP_13502539.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|375377037|gb|EHS80531.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-160]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|417796461|ref|ZP_12443671.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21305]
gi|418872486|ref|ZP_13426824.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|334269165|gb|EGL87593.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21305]
gi|375367140|gb|EHS71109.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-125]
Length = 375
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|167630429|ref|YP_001680928.1| acetoin utilization protein, subunit c [Heliobacterium
modesticaldum Ice1]
gi|167593169|gb|ABZ84917.1| acetoin utilization protein, subunit c [Heliobacterium
modesticaldum Ice1]
Length = 390
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPD+ G E HPF+ + + G + + IV P ++E+L VHSE
Sbjct: 7 LIYSPDFHTYHFGPE--HPFNPLRLEVTVDLIRRCGLIAPSQIVPPEACTREELRSVHSE 64
Query: 97 SYLKSLQSSPNVSIIIE-VPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAKL-- 146
+ L +++ + ++ E + P L FP +++ G T+ A+L
Sbjct: 65 ALLDAIEGAGEGRLLPEQLRPFGLGDDETPAFPGMGEATRLV------AGATLQGARLIM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
E + GG HH + GFC D ++ I AF+Q +V ID DAH G+G
Sbjct: 119 EGETDHVFQIAGGLHHGHRNRASGFCVVNDAAIAI--AFLQRRYGLKVAYIDTDAHHGDG 176
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F D V + + G Y
Sbjct: 177 VQSIFYDDPTVLTISIHETGRY 198
>gi|82751324|ref|YP_417065.1| acetoin utilization protein [Staphylococcus aureus RF122]
gi|82656855|emb|CAI81284.1| acetoin utilization protein [Staphylococcus aureus RF122]
Length = 389
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVITYSIHETG 199
>gi|396582606|gb|AFN88470.1| histone deacetylase [Aeromonas hydrophila]
Length = 319
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ L + Y P Y S L + H F +K+ + + L S G+ + E A+ E +
Sbjct: 21 VMSLRIFYHPLY--SALALPARHRFPLAKYQALFERLGSLGY----PLAEAAPATPEQIK 74
Query: 92 VVHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH +Y+++ L + + I ++ FP L++R + + VG T+ A++ A
Sbjct: 75 RVHDAAYVEAALAGTLDAGAIRQLG----FPWSPLLIERTL-----RSVGATLAASRHAL 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 126 EQGCGLQISGGYHHAHRDVGSGFCLFNDLVIAAQMCLDEGRCEQVLIVDLDVHQGDG 182
>gi|383452543|ref|YP_005366532.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380727540|gb|AFE03542.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 592
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ + Y Y + GIE + +L G + + P+ S L V
Sbjct: 15 RVHVFYDEAYRLPLSGIESSVGIEPRGTDFTTWYLLEAGVVRAADVRHPVPVSYAQLARV 74
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER-GW 152
H YL+SL ++ I P + + L L R GGT+ AA+LA R G
Sbjct: 75 HDARYLESLSDPATLARIYATDPSEVPVDAL-----LDSVRLVCGGTLGAARLALARQGP 129
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+N+ GGFHH D+GGGFC DI++ + V ++DLDAH +G +
Sbjct: 130 VVNMAGGFHHARPDKGGGFCTVNDIAVAVADLRASGFDGSVAVLDLDAHPPDGTAACLAG 189
Query: 213 DSRVYI 218
+V+I
Sbjct: 190 QPKVWI 195
>gi|170719842|ref|YP_001747530.1| histone deacetylase superfamily protein [Pseudomonas putida W619]
gi|169757845|gb|ACA71161.1| histone deacetylase superfamily [Pseudomonas putida W619]
Length = 304
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPEHRFPMDKFRLLRDHLVESGLTTDQALLRPQICPNDILALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA++A + G
Sbjct: 60 DRDYIERYMHGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHFDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|379736729|ref|YP_005330235.1| acetoin dehydrogenase [Blastococcus saxobsidens DD2]
gi|378784536|emb|CCG04205.1| Acetoin dehydrogenase [Blastococcus saxobsidens DD2]
Length = 393
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLVVHSESY 98
+D + LG + HP + + S G L D+ ++ P A ++ L +VH Y
Sbjct: 9 WDDALLGYTMGGDHPLHPVRLDLTMRLADSLGVLATDRLRVLTPTPAGEDLLTLVHDPRY 68
Query: 99 LKSLQSSPNVSII---IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG--WA 153
L++++ +P V + + P +FP+ ++ GG++LAA+ A
Sbjct: 69 LEAVRQAPFVPDVGHGMGTPDNPVFPDMYDAAALI------TGGSVLAAQQVHSGAAQHA 122
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N+ GG HH D GFC + D ++ I + Q R+ +DLD H G+G + F D
Sbjct: 123 VNISGGLHHAMRDRASGFCVFNDAAVAIAWLLRQ-GYERIAYVDLDVHHGDGVQTAFYDD 181
Query: 214 SRVYILDMFN------PGI-YPRDY-EARRFIDQKVEVVVNN 247
RV + + PG YP + +A + + V + + N
Sbjct: 182 PRVLTVSIHQTPLTLFPGTGYPEETGDAEKALGSAVNLALPN 223
>gi|417801016|ref|ZP_12448117.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21318]
gi|334277340|gb|EGL95571.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21318]
Length = 389
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|424047263|ref|ZP_17784823.1| histone deacetylase domain protein [Vibrio cholerae HENC-03]
gi|408884107|gb|EKM22861.1| histone deacetylase domain protein [Vibrio cholerae HENC-03]
Length = 306
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + H + K+ + Q L+SE + + + +P S +D+
Sbjct: 2 LPLIYHPVY--SQLDLPNGHRYPIMKYRYLYQAVMEKLASEDWGGQIEVFQPSLLSTDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHDGEYVDLLVTG-------TMPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH + G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKNFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|119486182|ref|ZP_01620242.1| histone deacetylase/AcuC/AphA family protein [Lyngbya sp. PCC 8106]
gi|119456673|gb|EAW37802.1| histone deacetylase/AcuC/AphA family protein [Lyngbya sp. PCC 8106]
Length = 305
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY L H F SK+ + Q L ++ ++ + + P E + +
Sbjct: 1 MDLPIVYHSDYVAPLL---PGHRFPMSKFRLLYQMLLADEVIEPSQVHTPELPPSEWIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ P I +P + L R + VGG +L AKLA
Sbjct: 58 VHDRDYVQAYCQGTLDPKAQRRIGLP----WSPALANRTCI-----AVGGAVLTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEK 208
G A N GG HH + G GFC + DI++ L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNLGTGFCIFNDIAIAAR-TIQNLGLAPKILILDLDVHQGDATAF 167
Query: 209 DFSSDSRVYILDMFNPGIYP 228
F D V+ M +P
Sbjct: 168 IFQDDPSVFTFSMHCEANFP 187
>gi|116621031|ref|YP_823187.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116224193|gb|ABJ82902.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 299
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSI 110
H F + K+ + L +E + P E ++ +L H E Y++++ P V
Sbjct: 21 HKFPTQKYAMLRSKLEAEHRFELTP-APPAEIAQLEL--AHEEQYVRAILHGDVDPRVMR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + LV+R + VGGT+ A++ A E G N+ GG HH EG G
Sbjct: 78 RIGFP----WSEALVRRTL-----ASVGGTLAASRDAMESGLGGNLAGGTHHAFRAEGSG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
FC + D+++ I + +R +IDLD HQG+G F SD V + + +P
Sbjct: 129 FCVFNDLAVAILMLRREGLAARAAVIDLDVHQGDGTASIFESDPSVLTVSIHGENNFP 186
>gi|26991445|ref|NP_746870.1| histone deacetylase superfamily protein [Pseudomonas putida KT2440]
gi|24986520|gb|AAN70334.1|AE016675_4 histone deacetylase family protein [Pseudomonas putida KT2440]
Length = 304
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|148268213|ref|YP_001247156.1| histone deacetylase superfamily protein [Staphylococcus aureus
subsp. aureus JH9]
gi|150394281|ref|YP_001316956.1| histone deacetylase superfamily protein [Staphylococcus aureus
subsp. aureus JH1]
gi|253315892|ref|ZP_04839105.1| histone deacetylase superfamily protein [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|257794118|ref|ZP_05643097.1| histone deacetylase [Staphylococcus aureus A9781]
gi|258415822|ref|ZP_05682093.1| histone deacetylase [Staphylococcus aureus A9763]
gi|258420651|ref|ZP_05683590.1| histone deacetylase superfamily protein [Staphylococcus aureus
A9719]
gi|258438301|ref|ZP_05689585.1| histone deacetylase superfamily protein [Staphylococcus aureus
A9299]
gi|258443759|ref|ZP_05692098.1| histone deacetylase superfamily protein [Staphylococcus aureus
A8115]
gi|258445970|ref|ZP_05694146.1| histone deacetylase superfamily protein [Staphylococcus aureus
A6300]
gi|258448303|ref|ZP_05696430.1| histone deacetylase superfamily protein [Staphylococcus aureus
A6224]
gi|258454170|ref|ZP_05702141.1| histone deacetylase superfamily protein [Staphylococcus aureus
A5937]
gi|269203373|ref|YP_003282642.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ED98]
gi|282893229|ref|ZP_06301463.1| acetoin utilization protein AcuC [Staphylococcus aureus A8117]
gi|282927864|ref|ZP_06335475.1| acetoin utilization protein AcuC [Staphylococcus aureus A10102]
gi|295406046|ref|ZP_06815854.1| acetoin utilization protein AcuC [Staphylococcus aureus A8819]
gi|296276749|ref|ZP_06859256.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus MR1]
gi|297245029|ref|ZP_06928906.1| acetoin utilization protein AcuC [Staphylococcus aureus A8796]
gi|384864946|ref|YP_005750305.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150878|ref|YP_005742442.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
04-02981]
gi|415691799|ref|ZP_11453889.1| histone deacetylase superfamily protein [Staphylococcus aureus
subsp. aureus CGS03]
gi|417651352|ref|ZP_12301115.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21172]
gi|418424911|ref|ZP_12998023.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS1]
gi|418430709|ref|ZP_13003618.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418434337|ref|ZP_13006449.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437350|ref|ZP_13009144.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440247|ref|ZP_13011946.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443265|ref|ZP_13014863.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446330|ref|ZP_13017802.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449350|ref|ZP_13020732.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS9]
gi|418567019|ref|ZP_13131384.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21272]
gi|418638618|ref|ZP_13200906.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|418662733|ref|ZP_13224269.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878657|ref|ZP_13432891.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881424|ref|ZP_13435640.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884241|ref|ZP_13438433.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886991|ref|ZP_13441138.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418895502|ref|ZP_13449596.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914828|ref|ZP_13468798.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920764|ref|ZP_13474695.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418932051|ref|ZP_13485885.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991670|ref|ZP_13539330.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419786292|ref|ZP_14312028.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|424775115|ref|ZP_18202114.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CM05]
gi|443636008|ref|ZP_21120126.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21236]
gi|147741282|gb|ABQ49580.1| histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus JH9]
gi|149946733|gb|ABR52669.1| histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus JH1]
gi|257788090|gb|EEV26430.1| histone deacetylase [Staphylococcus aureus A9781]
gi|257839415|gb|EEV63888.1| histone deacetylase [Staphylococcus aureus A9763]
gi|257843255|gb|EEV67665.1| histone deacetylase superfamily protein [Staphylococcus aureus
A9719]
gi|257848345|gb|EEV72336.1| histone deacetylase superfamily protein [Staphylococcus aureus
A9299]
gi|257851165|gb|EEV75108.1| histone deacetylase superfamily protein [Staphylococcus aureus
A8115]
gi|257855212|gb|EEV78151.1| histone deacetylase superfamily protein [Staphylococcus aureus
A6300]
gi|257858542|gb|EEV81418.1| histone deacetylase superfamily protein [Staphylococcus aureus
A6224]
gi|257863622|gb|EEV86379.1| histone deacetylase superfamily protein [Staphylococcus aureus
A5937]
gi|262075663|gb|ACY11636.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus ED98]
gi|282590374|gb|EFB95453.1| acetoin utilization protein AcuC [Staphylococcus aureus A10102]
gi|282764547|gb|EFC04673.1| acetoin utilization protein AcuC [Staphylococcus aureus A8117]
gi|285817417|gb|ADC37904.1| NAD-independent protein deacetylase AcuC [Staphylococcus aureus
04-02981]
gi|294969043|gb|EFG45064.1| acetoin utilization protein AcuC [Staphylococcus aureus A8819]
gi|297178109|gb|EFH37357.1| acetoin utilization protein AcuC [Staphylococcus aureus A8796]
gi|312830113|emb|CBX34955.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315130627|gb|EFT86613.1| histone deacetylase superfamily protein [Staphylococcus aureus
subsp. aureus CGS03]
gi|329727536|gb|EGG63992.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21172]
gi|371982723|gb|EHO99871.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21272]
gi|375021186|gb|EHS14691.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|375035690|gb|EHS28802.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|377693543|gb|EHT17913.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377693944|gb|EHT18312.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377712447|gb|EHT36664.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714068|gb|EHT38272.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377721806|gb|EHT45935.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377724493|gb|EHT48609.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377730765|gb|EHT54831.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377755484|gb|EHT79383.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377763619|gb|EHT87474.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383360791|gb|EID38182.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|387717849|gb|EIK05847.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387718877|gb|EIK06834.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS1]
gi|387724670|gb|EIK12319.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS4]
gi|387726850|gb|EIK14392.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS5]
gi|387729788|gb|EIK17206.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS6]
gi|387735012|gb|EIK22155.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS8]
gi|387736219|gb|EIK23321.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS9]
gi|387736338|gb|EIK23434.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS7]
gi|402346973|gb|EJU82043.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CM05]
gi|408423821|emb|CCJ11232.1| Histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus ST228]
gi|408425811|emb|CCJ13198.1| Histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus ST228]
gi|408427798|emb|CCJ15161.1| Histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus ST228]
gi|408429787|emb|CCJ26952.1| Histone deacetylase superfamily [Staphylococcus aureus subsp.
aureus ST228]
gi|408431774|emb|CCJ19089.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ST228]
gi|408433768|emb|CCJ21053.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ST228]
gi|408435760|emb|CCJ23020.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ST228]
gi|408437744|emb|CCJ24987.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus ST228]
gi|443408517|gb|ELS67036.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21236]
Length = 389
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|418292802|ref|ZP_12904732.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379064215|gb|EHY76958.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 306
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTDEALLRPELCSQDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHAPDYVTRYCSGEMSRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|392422523|ref|YP_006459127.1| histone deacetylase family protein [Pseudomonas stutzeri CCUG
29243]
gi|390984711|gb|AFM34704.1| histone deacetylase family protein [Pseudomonas stutzeri CCUG
29243]
Length = 306
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTDEALLRPELCSQDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHAPDYVTRYCSGEMSRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|345021571|ref|ZP_08785184.1| acetoin utilization protein [Ornithinibacillus scapharcae TW25]
Length = 384
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN------ 107
HPF+ + + L LD+ I+ P A+ E++ ++H Y+ +++S+
Sbjct: 22 HPFNQKRVLLTKELLEESNQLDRTNILVPRVATDEEISLIHDPKYIHAVKSASFLNHEQL 81
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW--AINVGGGFHHCSA 165
+ ++ FPN + VG T+ A + G A+N GG HH
Sbjct: 82 IRFGLDTDDTPAFPNMHEASASI------VGATLTAVDAVLKEGARAAVNFSGGLHHGFK 135
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ GFC Y D ++ I Y Q N+ RV+ +D DAH G+G + F D V + G
Sbjct: 136 QKASGFCIYNDAAIAIKYIRKQFNL-RVLYVDTDAHHGDGVQWAFYEDPNVCTFSIHETG 194
Query: 226 IY 227
Y
Sbjct: 195 RY 196
>gi|398311822|ref|ZP_10515296.1| acetoin utilization protein AcuC [Bacillus mojavensis RO-H-1]
Length = 388
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L S D+ IV P A++++L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKSMDAFDEGDIVSPRLAAEDELALVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADYVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N+GGG HH GFC Y D ++ I Y + +RV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQEKYQ-ARVLYIDTDAHHGDGV 176
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F + + L + G Y
Sbjct: 177 QFAFYDNPNICTLSIHETGRY 197
>gi|423097458|ref|ZP_17085254.1| histone deacetylase family protein [Pseudomonas fluorescens Q2-87]
gi|397887914|gb|EJL04397.1| histone deacetylase family protein [Pseudomonas fluorescens Q2-87]
Length = 306
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDVDLLRPSLCPPDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DRAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLASGRVSRVLIFDCDVHQGDG 164
>gi|418654605|ref|ZP_13216504.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|375014804|gb|EHS08476.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus IS-99]
Length = 375
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|336314525|ref|ZP_08569442.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rheinheimera sp. A13L]
gi|335881065|gb|EGM78947.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rheinheimera sp. A13L]
Length = 319
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q VGGT+ +LA ++G A+++ GG+HH EG GFC + D++
Sbjct: 82 RRIGFPWSEQLVTRSLTSVGGTVQTVQLALQQGLALHLSGGYHHAFVGEGSGFCLFNDLA 141
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ YA Q + +V+I D D HQG+G FS + + + +P
Sbjct: 142 VAARYALTQ-GVDKVLIFDCDVHQGDGTAAIFSDEPAIITASLHGEKNFP 190
>gi|15924725|ref|NP_372259.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927312|ref|NP_374845.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
N315]
gi|156980052|ref|YP_001442311.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006521|ref|ZP_05145122.2| acetoin utilization protein [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|54036696|sp|P64376.1|ACUC_STAAN RecName: Full=Acetoin utilization protein AcuC
gi|54040696|sp|P64375.1|ACUC_STAAM RecName: Full=Acetoin utilization protein AcuC
gi|13701530|dbj|BAB42824.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247507|dbj|BAB57897.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|156722187|dbj|BAF78604.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 389
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYIAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|418452154|ref|ZP_13023487.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS10]
gi|387744292|gb|EIK31062.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus VRS10]
Length = 389
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|308048872|ref|YP_003912438.1| histone deacetylase [Ferrimonas balearica DSM 9799]
gi|307631062|gb|ADN75364.1| Histone deacetylase [Ferrimonas balearica DSM 9799]
Length = 303
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+Y P Y S L + H F K+ + L ++G L + +P+ S + + VH
Sbjct: 5 VYHPIY--SALPLPANHRFPIHKYRLLHDALLAQGVLQPERLHQPVPLSLDQVTQVHCPD 62
Query: 98 YLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAK 148
Y++ Q + + QR++ +P+ + GGT+ AA+LA
Sbjct: 63 YVQRFAQGTLDRK---------------AQRRLGFPWSPPLVARTLTACGGTLRAAELAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A ++ GG+HH D G GFC + D+ L + +SRV+I D D HQG+G
Sbjct: 108 EHGIACHLSGGYHHAHRDFGSGFCVFNDLVLAARLLLQRQAVSRVLIFDCDVHQGDGSAA 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVE 242
D + + +P +AR +D +E
Sbjct: 168 LCQDDPDIITCSLHCERNFPA-RKARSHVDVPLE 200
>gi|344174578|emb|CCA86379.1| histone deacetylase [Ralstonia syzygii R24]
Length = 322
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+VH+ Y+ ++ + P I P + +V+R R+
Sbjct: 42 EAPRAGNDALLLVHAPDYVSAVGAGRLDPARQREIGFP----WSLAMVERS-----RRSA 92
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 93 GATMAACEAAMIDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGRTPDGF 150
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 151 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEA 192
>gi|24373380|ref|NP_717423.1| histone deacetylase superfamily protein [Shewanella oneidensis
MR-1]
gi|24347646|gb|AAN54867.1| histone deacetylase superfamily protein [Shewanella oneidensis
MR-1]
Length = 304
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + E+++ VH
Sbjct: 2 IPLVYHASY--SKLALPIHHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + + S + + FP LV+R + + GT L A LA + G
Sbjct: 60 HRDYVEQFIDGTLATSALRRIG----FPWSEALVERTL-----HSLAGTSLTAALALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A+++ GG+HH + G G+C + D+ + ++ + +++I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDG 164
>gi|407781491|ref|ZP_11128709.1| histone deacetylase [Oceanibaculum indicum P24]
gi|407207708|gb|EKE77639.1| histone deacetylase [Oceanibaculum indicum P24]
Length = 373
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 32 IFKLPLIYSPD-YDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD--KNCIVEPLEASKE 88
+ + P++ D Y S G + HP + + + + G+ D + VEP A++E
Sbjct: 1 MLEKPILLGSDIYRHSIYG--RKHPLSIPRVSLVLDLIRALGWFDEARYRAVEP--ATRE 56
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPP-------VALFPNCLVQRKVLYPFRKQVGGTI 141
L H+ Y+++L + VPP + N + P +I
Sbjct: 57 QLTRFHAPDYVEALMRAEETR---HVPPEDQERYNIGRNGNPVFAEIFRRPA-TSCAASI 112
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA L KE G N GG HH D GFC + D L I AF+ + RV+ IDLDAH
Sbjct: 113 LAAGLLKEGGVVHNPAGGTHHGRPDRASGFCYFNDAVLAI-LAFLDQGLERVLYIDLDAH 171
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPR 229
G+G + F + RV + + +PR
Sbjct: 172 HGDGVQDAFHDEERVLTVSIHEQDRWPR 199
>gi|312109895|ref|YP_003988211.1| histone deacetylase [Geobacillus sp. Y4.1MC1]
gi|336234315|ref|YP_004586931.1| histone deacetylase [Geobacillus thermoglucosidasius C56-YS93]
gi|423718938|ref|ZP_17693120.1| acetoin utilization protein acuC, diacetylase [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214996|gb|ADP73600.1| Histone deacetylase [Geobacillus sp. Y4.1MC1]
gi|335361170|gb|AEH46850.1| Histone deacetylase [Geobacillus thermoglucosidasius C56-YS93]
gi|383367841|gb|EID45116.1| acetoin utilization protein acuC, diacetylase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 396
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP------- 106
HPF+ + L + L+ I+EP A+ E+L ++H ++Y+++++++
Sbjct: 22 HPFNQLRVKLTYDLLRAMNALEDEQIIEPRIATDEELALIHDQTYIEAVKAAGKGQLPEH 81
Query: 107 ---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A L+ + A+++GGG H
Sbjct: 82 TALNYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDYVLSGKAKHALSLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIKYIQEKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|229522001|ref|ZP_04411418.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TM
11079-80]
gi|419837765|ref|ZP_14361203.1| histone deacetylase domain protein [Vibrio cholerae HC-46B1]
gi|421344657|ref|ZP_15795060.1| histone deacetylase domain protein [Vibrio cholerae HC-43B1]
gi|421354707|ref|ZP_15805039.1| histone deacetylase domain protein [Vibrio cholerae HE-45]
gi|422307990|ref|ZP_16395143.1| histone deacetylase domain protein [Vibrio cholerae CP1035(8)]
gi|423735719|ref|ZP_17708915.1| histone deacetylase domain protein [Vibrio cholerae HC-41B1]
gi|424010057|ref|ZP_17752993.1| histone deacetylase domain protein [Vibrio cholerae HC-44C1]
gi|229340926|gb|EEO05931.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TM
11079-80]
gi|395940737|gb|EJH51418.1| histone deacetylase domain protein [Vibrio cholerae HC-43B1]
gi|395953832|gb|EJH64445.1| histone deacetylase domain protein [Vibrio cholerae HE-45]
gi|408618659|gb|EKK91724.1| histone deacetylase domain protein [Vibrio cholerae CP1035(8)]
gi|408629577|gb|EKL02258.1| histone deacetylase domain protein [Vibrio cholerae HC-41B1]
gi|408856313|gb|EKL96008.1| histone deacetylase domain protein [Vibrio cholerae HC-46B1]
gi|408863585|gb|EKM03062.1| histone deacetylase domain protein [Vibrio cholerae HC-44C1]
Length = 306
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L ++P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------KLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|258621190|ref|ZP_05716224.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM573]
gi|424807274|ref|ZP_18232682.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus SX-4]
gi|258586578|gb|EEW11293.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM573]
gi|342325216|gb|EGU20996.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus SX-4]
Length = 306
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P A+ ++
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQQEHSEEWRTAFNFIAPQMAALSLVM 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
VH Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SVHDSDYVRALLEGT-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 QALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
>gi|431804581|ref|YP_007231484.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
gi|430795346|gb|AGA75541.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
Length = 304
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLIDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SY++ + ++S + + L +R V + VGG++L+A++A + G A
Sbjct: 60 DRSYIERYMNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLSAEMALQHGIAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 114 HLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|260779262|ref|ZP_05888154.1| histone deacetylase/AcuC/AphA family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605426|gb|EEX31721.1| histone deacetylase/AcuC/AphA family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 308
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-----IVEPLEASKED 89
+PLIY Y S L + + H + K+ + + F D+ EP + E+
Sbjct: 2 IPLIYHSIY--SELPLPQGHRYPIHKYRLLFNEIEKVRFRDEQWQAFFHYCEPQALTSEE 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILA 143
++ H E Y+ L S +P + FP CL++R + GGT L
Sbjct: 60 VMKTHCEQYVSELFSGG-------LPAARMRRIGFPWSECLIERTL-----TSAGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
A+ A E G AI++ GG+HH D G GFC D+ L A I +V+I+D D H G
Sbjct: 108 AEKAIEHGVAIHLSGGYHHAHYDFGSGFCLLNDLVLAAKRALTHEGIEKVLIVDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|428176853|gb|EKX45735.1| hypothetical protein GUITHDRAFT_70985 [Guillardia theta CCMP2712]
Length = 342
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 21/180 (11%)
Query: 34 KLPLIYSPDY-DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-IVE---PLEASKE 88
KLP++ P Y D+ + H F SK+G + + S L + +VE P+ AS
Sbjct: 25 KLPVVSHPGYGDVE--NWDPKHRFVMSKFGGMRNVIESTMHLREEVEVVEDFAPVSAST- 81
Query: 89 DLLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
L +VH +++ + P I +P + LV+R +L +V GT +AA+
Sbjct: 82 -LCLVHDRKFVEDFCEGKMDPRAMRRIGLP----WSPSLVRRTLL-----EVQGTTIAAR 131
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA ER A N GG HH AD G GF + D+++ + + RV+I+DLD HQG+G
Sbjct: 132 LALERRLACNAAGGTHHSFADYGSGFTIFNDLAVTAAWLRDERLAKRVLILDLDVHQGDG 191
>gi|86140956|ref|ZP_01059515.1| Histone deacetylase superfamily protein [Leeuwenhoekiella
blandensis MED217]
gi|85832898|gb|EAQ51347.1| Histone deacetylase superfamily protein [Leeuwenhoekiella
blandensis MED217]
Length = 300
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP ++ L VH++ Y+ +L+
Sbjct: 18 HRFPMEKYDLLPKQLLCEGTCTEANFFEPGFPEEKYLTAVHTQEYVTNLK---------- 67
Query: 114 VPPVALFPNCLVQRKVLYPF------RKQV--GGTILAAKLAKERGWAINVGGGFHHCSA 165
AL + RK +P R+Q+ GT+ + A + G A N+ GG HH +
Sbjct: 68 ----ALNLDRRAIRKTGFPLSQELVDREQIIAQGTMTGCEFALKYGIAFNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
G FC D ++ Y + +++I+DLD HQGNG + F D V+ M G
Sbjct: 124 GHGEAFCLLNDQAIAARYLQSKGLAKQILIVDLDVHQGNGTAEIFQDDPSVFTFSMHGAG 183
Query: 226 IYP 228
YP
Sbjct: 184 NYP 186
>gi|359455670|ref|ZP_09244881.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20495]
gi|414071985|ref|ZP_11407941.1| histone deacetylase family protein [Pseudoalteromonas sp. Bsw20308]
gi|358047293|dbj|GAA81130.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20495]
gi|410805565|gb|EKS11575.1| histone deacetylase family protein [Pseudoalteromonas sp. Bsw20308]
Length = 297
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ ++ + G L N P++A+ L + H
Sbjct: 1 MQLFYHPLY--SALTLPERHRFPIQKYQKLKAEIEGLG-LTPNNFTSPIKATPAQLSLCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+++Y+ + N ++ + FP N LV+R +L VG +I +++ A + G+
Sbjct: 58 NQTYINNFL---NGTLSNKAIKKMGFPYSNELVERTLL-----SVGASIQSSEHALKHGF 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + +
Sbjct: 110 SANLSGGYHHAYSDYGSGFCIFNDLAIAAAHLINTEQADTVLIFDCDVHQGDGTAQITQN 169
Query: 213 DSRVYILDMFNPGIYPRDYEARRF 236
++ + +PR+ + +
Sbjct: 170 HDQIITCSIHCEQNFPRNKQQSTY 193
>gi|429220434|ref|YP_007182078.1| deacetylase [Deinococcus peraridilitoris DSM 19664]
gi|429131297|gb|AFZ68312.1| deacetylase, histone deacetylase/acetoin utilization protein
[Deinococcus peraridilitoris DSM 19664]
Length = 297
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
VH YL ++ + V + P +V+R R+ G T++A + A G
Sbjct: 53 AVHDRGYLDRWRAGEVSRDEVRVFGLPWSPE-VVERA-----RRASGATVVALRDALRSG 106
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
W +N+ GG HH D GF D+ + + A + +SRV I+DLD HQGNG +
Sbjct: 107 WGVNLSGGTHHAFFDRAEGFSLLNDVVIAVTLALREGWVSRVAIVDLDVHQGNGTASLLA 166
Query: 212 SDSRVYILDMFNPGIYP 228
++R Y L + YP
Sbjct: 167 REARAYTLSVHGERNYP 183
>gi|405950370|gb|EKC18363.1| Histone deacetylase 8 [Crassostrea gigas]
Length = 488
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 18 RNRILSSKLYFDIPIFKLPL-IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
R+ +SSK D K P+ IYSP+ + K+ ++ ++ + + G L+
Sbjct: 113 RDTTVSSKAQSDPDKQKKPVYIYSPELIQRCDAMPKI----INRASKVHTLIEAYGLLNS 168
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSL----QSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+V P A+ E++L H+E Y++ L + + + E L +C + R V
Sbjct: 169 MQVVPPRSATLEEMLGFHAEDYIQFLSLLGRQTDEEKLEEESEQYGLTYDCPINRHVYTY 228
Query: 133 FRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
G ++ AA+ + + A+N GG+HH D GFC DI L I ++
Sbjct: 229 AALTSGASLRAAECLMEGQSQVAVNWCGGWHHAKRDMASGFCYINDIVLAI--LKLREKY 286
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
RV+ +DLD H G+G E+ F +RV + + ++PG +P
Sbjct: 287 DRVLYVDLDVHHGDGVEEAFCGSTRVMTISVHKYSPGFFP 326
>gi|417894330|ref|ZP_12538349.1| histone deacetylase family, partial [Staphylococcus aureus subsp.
aureus 21201]
gi|341852475|gb|EGS93364.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21201]
Length = 363
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|384547954|ref|YP_005737207.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
ED133]
gi|298695003|gb|ADI98225.1| acetoin utilization protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 389
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHV 190
>gi|333892281|ref|YP_004466156.1| histone deacetylase superfamily protein [Alteromonas sp. SN2]
gi|332992299|gb|AEF02354.1| histone deacetylase superfamily protein [Alteromonas sp. SN2]
Length = 298
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + + H F K+ I LSS G D + P + +L
Sbjct: 2 IPLVFHPIY--SQLSLPERHRFPIDKYQGIRNALSSHGVAD-SVFHTPSPLAITELECHF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L S + R++ +P+ Q V GT L A+L
Sbjct: 59 DKDYVQQLTSGT--------------LDKKAMRRIGFPWSDQLIERTLTAVAGTCLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GG+HH +D G GFC + D+ L I V+IID D HQG+G
Sbjct: 105 AIKHGKALNLTGGYHHAFSDFGSGFCLFNDLFLAAKAMQKFSGIDNVLIIDFDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYP 228
K D+ ++ + + +P
Sbjct: 165 AKLTQYDNSIFTVSVHGEKNFP 186
>gi|229524050|ref|ZP_04413455.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae bv.
albensis VL426]
gi|229337631|gb|EEO02648.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae bv.
albensis VL426]
Length = 306
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFECHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H +Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPAYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|393762659|ref|ZP_10351285.1| histone deacetylase [Alishewanella agri BL06]
gi|392606281|gb|EIW89166.1| histone deacetylase [Alishewanella agri BL06]
Length = 312
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 28/190 (14%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PLIY P Y S L + H + K+ + Q L + G + ++ ++P + L +H
Sbjct: 7 PLIYHPCY--SELALPANHRYPIGKYRSLYQQLLALG-VPESGFLQPAPVTAAALSTLHD 63
Query: 96 ESYLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+++L Q + + + R++ +P+ +Q+ GGT+L A+
Sbjct: 64 PAYVEALCQGTLDSKAM---------------RRIGFPWSEQLIKRSLTSLGGTLLCAEQ 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+++ GG+HH EG GFC + D++ + Q + V+I DLD HQG+G
Sbjct: 109 ALQHGLALHLSGGYHHAFYAEGSGFCLFNDLAFAA-LSMQQQGVGPVLIFDLDVHQGDGT 167
Query: 207 EKDFSSDSRV 216
F+++S +
Sbjct: 168 AALFTANSGI 177
>gi|422923349|ref|ZP_16956503.1| histone deacetylase domain protein [Vibrio cholerae BJG-01]
gi|341644088|gb|EGS68329.1| histone deacetylase domain protein [Vibrio cholerae BJG-01]
Length = 306
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|121730304|ref|ZP_01682673.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae V52]
gi|121627942|gb|EAX60511.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae V52]
Length = 306
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKTLVERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|229528940|ref|ZP_04418330.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
12129(1)]
gi|297579548|ref|ZP_06941476.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
RC385]
gi|384425022|ref|YP_005634380.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
LMA3984-4]
gi|229332714|gb|EEN98200.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
12129(1)]
gi|297537142|gb|EFH75975.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
RC385]
gi|327484575|gb|AEA78982.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
LMA3984-4]
Length = 306
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|258653919|ref|YP_003203075.1| histone deacetylase [Nakamurella multipartita DSM 44233]
gi|258557144|gb|ACV80086.1| Histone deacetylase [Nakamurella multipartita DSM 44233]
Length = 393
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D LG + HP +W G LD ++ P A L VH+ Y++
Sbjct: 8 WDRRMLGYDLGGDHPLHPLRWDLTWALAGELGVLDDYEVLVPEVADDAALGRVHTAGYIE 67
Query: 101 SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ-----VGGTILAAKLAKER--GWA 153
+++++ P+A+ ++P + GG+I AA+ R A
Sbjct: 68 AVRAASGPV------PMAVGHGLGTDDNPIFPGMHENAALIAGGSIDAARAIAHREVDRA 121
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N GG HH D GFC Y D++L I A + ++R+ ID+DAH G+G + F D
Sbjct: 122 VNFCGGLHHAMPDHASGFCVYNDVALGI-TAMLDAGVNRIAYIDVDAHHGDGVQAAFYDD 180
Query: 214 SRVYILDM 221
RV + +
Sbjct: 181 PRVLTISL 188
>gi|117618465|ref|YP_857293.1| histone deacetylase/AcuC/AphA family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559872|gb|ABK36820.1| histone deacetylase/AcuC/AphA family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 319
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ L + Y P Y S L + H F +K+ + + L S G+ + E A+ E +
Sbjct: 21 VMSLRIFYHPLY--SALTLPARHRFPLAKYQALFERLGSLGY----PLAEAAPATPEQIK 74
Query: 92 VVHSESYLKS-LQSSPNVSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ L + + I ++ FP + L+ + L + VG T+ A++ A E
Sbjct: 75 RVHDAAYVEAALAGTLDADAIRQLG----FPWSPLLMERTL----RSVGATLAASRHALE 126
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 127 QGCGLQISGGYHHAHRDVGSGFCLFNDLVIAAQVCLDEGRCEQVLIVDLDVHQGDGSAAL 186
Query: 210 FSSDSRVYILDMFNPGIYPR 229
+ L + +PR
Sbjct: 187 CQGRRDIITLSLHGEHNFPR 206
>gi|239828064|ref|YP_002950688.1| histone deacetylase superfamily protein [Geobacillus sp. WCH70]
gi|239808357|gb|ACS25422.1| histone deacetylase superfamily [Geobacillus sp. WCH70]
Length = 396
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP------- 106
HPF+ + L + L+ IV P A+ E+L ++H +SY+++++++
Sbjct: 22 HPFNQLRVKLTYDLLRAMNALEDEQIVTPRVATDEELALIHDQSYIEAVKAAGKGQLPEQ 81
Query: 107 ---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A L+ + A+++GGG H
Sbjct: 82 VALNYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDYVLSGKAKHALSLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIKYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY 227
G Y
Sbjct: 193 HETGRY 198
>gi|254286837|ref|ZP_04961790.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
AM-19226]
gi|150423128|gb|EDN15076.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
AM-19226]
Length = 306
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|339492852|ref|YP_004713145.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
gi|338800224|gb|AEJ04056.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVTLGMTTDAALLRPSLCSRDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDADYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|386019455|ref|YP_005937479.1| histone deacetylase family protein [Pseudomonas stutzeri DSM 4166]
gi|327479427|gb|AEA82737.1| histone deacetylase family protein [Pseudomonas stutzeri DSM 4166]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVTLGMTTDAALLRPSLCSRDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDADYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|449095415|ref|YP_007427906.1| protein deacetylase [Bacillus subtilis XF-1]
gi|449029330|gb|AGE64569.1| protein deacetylase [Bacillus subtilis XF-1]
Length = 396
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L D IV P AS+E+L +VH++
Sbjct: 15 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKMINAFDDGDIVTPRLASEEELSLVHTD 72
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 127 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 184
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 185 VQFTFYDNPDVCTLSIHETGRY 206
>gi|419830506|ref|ZP_14353991.1| histone deacetylase domain protein [Vibrio cholerae HC-1A2]
gi|419834188|ref|ZP_14357643.1| histone deacetylase domain protein [Vibrio cholerae HC-61A2]
gi|422917892|ref|ZP_16952210.1| histone deacetylase domain protein [Vibrio cholerae HC-02A1]
gi|423822793|ref|ZP_17716803.1| histone deacetylase domain protein [Vibrio cholerae HC-55C2]
gi|423856759|ref|ZP_17720611.1| histone deacetylase domain protein [Vibrio cholerae HC-59A1]
gi|423883062|ref|ZP_17724199.1| histone deacetylase domain protein [Vibrio cholerae HC-60A1]
gi|423998319|ref|ZP_17741571.1| histone deacetylase domain protein [Vibrio cholerae HC-02C1]
gi|424017213|ref|ZP_17757042.1| histone deacetylase domain protein [Vibrio cholerae HC-55B2]
gi|424020137|ref|ZP_17759923.1| histone deacetylase domain protein [Vibrio cholerae HC-59B1]
gi|424625511|ref|ZP_18063972.1| histone deacetylase domain protein [Vibrio cholerae HC-50A1]
gi|424629994|ref|ZP_18068281.1| histone deacetylase domain protein [Vibrio cholerae HC-51A1]
gi|424634042|ref|ZP_18072142.1| histone deacetylase domain protein [Vibrio cholerae HC-52A1]
gi|424637120|ref|ZP_18075128.1| histone deacetylase domain protein [Vibrio cholerae HC-55A1]
gi|424641029|ref|ZP_18078912.1| histone deacetylase domain protein [Vibrio cholerae HC-56A1]
gi|424649095|ref|ZP_18086758.1| histone deacetylase domain protein [Vibrio cholerae HC-57A1]
gi|443528013|ref|ZP_21094061.1| histone deacetylase domain protein [Vibrio cholerae HC-78A1]
gi|341636774|gb|EGS61468.1| histone deacetylase domain protein [Vibrio cholerae HC-02A1]
gi|408012064|gb|EKG49860.1| histone deacetylase domain protein [Vibrio cholerae HC-50A1]
gi|408017961|gb|EKG55433.1| histone deacetylase domain protein [Vibrio cholerae HC-52A1]
gi|408023175|gb|EKG60354.1| histone deacetylase domain protein [Vibrio cholerae HC-56A1]
gi|408023669|gb|EKG60828.1| histone deacetylase domain protein [Vibrio cholerae HC-55A1]
gi|408032614|gb|EKG69195.1| histone deacetylase domain protein [Vibrio cholerae HC-57A1]
gi|408054782|gb|EKG89741.1| histone deacetylase domain protein [Vibrio cholerae HC-51A1]
gi|408620279|gb|EKK93291.1| histone deacetylase domain protein [Vibrio cholerae HC-1A2]
gi|408634769|gb|EKL07004.1| histone deacetylase domain protein [Vibrio cholerae HC-55C2]
gi|408640551|gb|EKL12340.1| histone deacetylase domain protein [Vibrio cholerae HC-59A1]
gi|408641186|gb|EKL12967.1| histone deacetylase domain protein [Vibrio cholerae HC-60A1]
gi|408649010|gb|EKL20327.1| histone deacetylase domain protein [Vibrio cholerae HC-61A2]
gi|408852674|gb|EKL92496.1| histone deacetylase domain protein [Vibrio cholerae HC-02C1]
gi|408859924|gb|EKL99578.1| histone deacetylase domain protein [Vibrio cholerae HC-55B2]
gi|408867231|gb|EKM06593.1| histone deacetylase domain protein [Vibrio cholerae HC-59B1]
gi|443453529|gb|ELT17348.1| histone deacetylase domain protein [Vibrio cholerae HC-78A1]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------RLPSAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|404401075|ref|ZP_10992659.1| histone deacetylase [Pseudomonas fuscovaginae UPB0736]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPEHRFPMDKFRLLRDHLVDSGLTRDQELLRPDLCPVDILTLAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ ++ S + +P + L +R + + VGG++LAA+ A E G
Sbjct: 60 DRDYIERYRAGELSREDQRRLGLP----WSEALARRTI-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLESGRVSRVLIFDCDVHQGDG 164
>gi|30025976|gb|AAP04525.1| putative T-histone deacetylase [Thermus caldophilus]
Length = 375
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G + HPF + + L + G + P EAS+E++L VHSE
Sbjct: 2 VIYREEYRLYNFGPD--HPFSPVRLEMLTSLLQALGVW--RAPLSPPEASREEVLSVHSE 57
Query: 97 SYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--LA 147
+K ++++ + ++ L FP ++L VGGT+ A+ +A
Sbjct: 58 RLVKRVEAASRGELYPDLEHYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRIMA 111
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCI-HYAFVQLNISRVMIIDLDAHQGNGH 206
E+ + +GGG HH D GFC Y D+S+ I H L RV +D+D H G+G
Sbjct: 112 GEKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTRAGL---RVAYVDIDVHHGDGV 167
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ + V L + G Y
Sbjct: 168 QWIHYEEGEVLTLSLHESGRY 188
>gi|417821386|ref|ZP_12468000.1| histone deacetylase domain protein [Vibrio cholerae HE39]
gi|423956550|ref|ZP_17735104.1| histone deacetylase domain protein [Vibrio cholerae HE-40]
gi|423985338|ref|ZP_17738655.1| histone deacetylase domain protein [Vibrio cholerae HE-46]
gi|340039017|gb|EGQ99991.1| histone deacetylase domain protein [Vibrio cholerae HE39]
gi|408657344|gb|EKL28424.1| histone deacetylase domain protein [Vibrio cholerae HE-40]
gi|408663942|gb|EKL34787.1| histone deacetylase domain protein [Vibrio cholerae HE-46]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------TLPAAKM-------RRIGFPWSKPLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|386014013|ref|YP_005932290.1| Histone deacetylase superfamily [Pseudomonas putida BIRD-1]
gi|313500719|gb|ADR62085.1| Histone deacetylase superfamily [Pseudomonas putida BIRD-1]
Length = 304
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY+ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|421615856|ref|ZP_16056875.1| histone deacetylase family protein [Pseudomonas stutzeri KOS6]
gi|409782038|gb|EKN61605.1| histone deacetylase family protein [Pseudomonas stutzeri KOS6]
Length = 306
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGMTTDAALLRPQMCSRDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y++ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDRDYVERYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|392551183|ref|ZP_10298320.1| histone deacetylase superfamily protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 298
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+ Y P Y S L + H F K+ + QF+ E ++ + P +AS +D+ VH
Sbjct: 3 IPIFYHPSY--SSLSLPDNHRFPIEKYQLLYQFIKQE-LAEQFRFITPEKASLDDISKVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+++ + + P A+ RK+ +P+ Q +G +I AKL
Sbjct: 60 CPIFVQQF-------VTGTLEPKAI-------RKMGFPWSPQLVERTLYSIGASIQGAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E A + GG+HH + G GFC + D+ + + +S+V+I+DLD HQG+G
Sbjct: 106 ALETHIASQISGGYHHSFPNFGSGFCIFNDLVIAARHLLDNNLVSKVVILDLDVHQGDG 164
>gi|392972395|ref|ZP_10337787.1| acetoin utilization protein AcuC [Staphylococcus equorum subsp.
equorum Mu2]
gi|403046271|ref|ZP_10901744.1| acetoin utilization protein [Staphylococcus sp. OJ82]
gi|392510108|emb|CCI61092.1| acetoin utilization protein AcuC [Staphylococcus equorum subsp.
equorum Mu2]
gi|402763980|gb|EJX18069.1| acetoin utilization protein [Staphylococcus sp. OJ82]
Length = 384
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
HPF+ + + L+ G+L + I++P A+ +L ++HS Y++++ ++S +
Sbjct: 25 HPFNQMRLKLTTELLTDLGYLKSHHIIKPRIANDTELSLIHSHDYIQAIRRASHGILSDN 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTI-LAAKLAKER-GWAINVGGGFHHCSADEGG 169
E L + +Q ++++ + VGG + LA + + ++GGG HH
Sbjct: 85 EAKKYGLDGDDTMQFRMMHKHSARIVGGALNLADHIMDDTVTNGCHLGGGLHHSLPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ I Y +Q RV+ ID DAH G+G + F ++ + I + G
Sbjct: 145 GFCIYNDVAVTIAY-LIQKYDQRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETG 199
>gi|163119603|ref|YP_080262.2| acetoin dehydrogenase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404490348|ref|YP_006714454.1| acetoin utilization protein AcuC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349349|gb|AAU41983.1| acetoin utilization protein AcuC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|145903113|gb|AAU24624.2| acetoin dehydrogenase [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 386
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
I+SP Y + HPF+ + L++ G + + P A++ +L +VH+
Sbjct: 6 FIFSPSYQT--YQFHQDHPFNQLRVYVTYDLLNTVGAFEPGETIAPRAATETELELVHTG 63
Query: 97 SYLKSLQ----------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK- 145
Y++++Q S N + E PV F +L VGGT+ AA
Sbjct: 64 DYIRAVQLAGAGKLPAAESENYGLGTEDTPV--FAGMHEAASLL------VGGTLTAADY 115
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ + A+N+GGG HH GFC Y D S+ I Y + + ++V+ ID DAH G+
Sbjct: 116 VMTGKARHALNLGGGLHHGFRGRASGFCVYNDSSVVIRYLQKKYH-AKVLYIDTDAHHGD 174
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F D V + + G Y
Sbjct: 175 GVQFTFYDDPSVCTVSIHETGRY 197
>gi|319647376|ref|ZP_08001598.1| AcuC protein [Bacillus sp. BT1B_CT2]
gi|317390723|gb|EFV71528.1| AcuC protein [Bacillus sp. BT1B_CT2]
Length = 386
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
I+SP Y + HPF+ + L++ G + + P A++ +L +VH+
Sbjct: 6 FIFSPSYQT--YQFHQDHPFNQLRVYVTYDLLNTVGAFEPGETIAPRAATETELELVHTG 63
Query: 97 SYLKSLQ----------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK- 145
Y++++Q S N + E PV F +L VGGT+ AA
Sbjct: 64 DYIRAVQLAGAGKLPAAESENYGLGTEDTPV--FAGMHEAASLL------VGGTLTAADY 115
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ + A+N+GGG HH GFC Y D S+ I Y + + ++V+ ID DAH G+
Sbjct: 116 VMTGKARHALNLGGGLHHGFRGRASGFCVYNDSSVVIRYLQKKYH-AKVLYIDTDAHHGD 174
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F D V + + G Y
Sbjct: 175 GVQFTFYDDPSVCTVSIHETGRY 197
>gi|421351773|ref|ZP_15802138.1| histone deacetylase domain protein [Vibrio cholerae HE-25]
gi|395952218|gb|EJH62832.1| histone deacetylase domain protein [Vibrio cholerae HE-25]
Length = 306
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------TLPAAKM-------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|423683453|ref|ZP_17658292.1| acetoin dehydrogenase [Bacillus licheniformis WX-02]
gi|383440227|gb|EID48002.1| acetoin dehydrogenase [Bacillus licheniformis WX-02]
Length = 386
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
I+SP Y + HPF+ + L++ G + + P A++ +L +VH+
Sbjct: 6 FIFSPSYQT--YQFHQDHPFNQLRVYVTYDLLNTVGAFEPGETIAPRAATETELELVHTG 63
Query: 97 SYLKSLQ----------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK- 145
Y++++Q S N + E PV F +L VGGT+ AA
Sbjct: 64 DYIRAVQLAGAGKLPAAESENYGLGTEDTPV--FAGMHEAASLL------VGGTLTAADY 115
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ + A+N+GGG HH GFC Y D S+ I Y + + ++V+ ID DAH G+
Sbjct: 116 VMTGKARHALNLGGGLHHGFRGRASGFCVYNDSSVVIRYLQKKYH-AKVLYIDTDAHHGD 174
Query: 205 GHEKDFSSDSRVYILDMFNPGIY 227
G + F D V + + G Y
Sbjct: 175 GVQFTFYDDPSVCTVSIHETGRY 197
>gi|348028362|ref|YP_004871048.1| histone deacetylase family protein [Glaciecola nitratireducens
FR1064]
gi|347945705|gb|AEP29055.1| histone deacetylase family protein [Glaciecola nitratireducens
FR1064]
Length = 298
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L++ P Y S L + H F K+ I L E + EP S E L ++
Sbjct: 4 LVFHPIY--SQLDLPVRHRFPIQKYQGIKDALLREK-VSAEFFYEPKPLSIEALSRIYDP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAK 148
Y+ L S E+ P A+ R++ +P+ Q+ GGT+L + LA
Sbjct: 61 VYISQLCSG-------ELDPKAM-------RRIGFPWSTQLVERTLTAAGGTVLTSTLAI 106
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH + G GFC D+ L +I +V+I D D HQG+G K
Sbjct: 107 EYGKALNLTGGYHHAFGNFGSGFCMVNDLYLAALNMLQSPSIDKVLIFDCDVHQGDGTAK 166
Query: 209 DFSSDSRVYILDMFNPGIYPR 229
+++S VY + + +P
Sbjct: 167 LAANNSAVYTVSIHGEKNFPH 187
>gi|418579653|ref|ZP_13143747.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418904052|ref|ZP_13458093.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377695269|gb|EHT19632.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377743067|gb|EHT67052.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1770]
Length = 226
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|332797379|ref|YP_004458879.1| histone deacetylase superfamily protein [Acidianus hospitalis W1]
gi|332695114|gb|AEE94581.1| histone deacetylase superfamily [Acidianus hospitalis W1]
Length = 339
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 43 YDISFLGIEKLHPF--DSSKWGRICQFLSS-EGFLDKNCIVEPLEASKEDLLVVHSESYL 99
+D FL I HP D +K RI +F EG D+ ++P A +EDLLVVHS+ YL
Sbjct: 6 WDDRFLNISFSHPMIRDIAK-ARIRKFRELLEGIKDEILFIKPEPAKEEDLLVVHSKEYL 64
Query: 100 KSLQ---SSPNVSIIIEVPPV---ALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+ L+ +SP + + E V +F + L+ +GG+I A K + +
Sbjct: 65 RKLKEASNSPYIGFLDEGDTVHYPGMFDDVLL----------ILGGSITAIKFSSFLDFI 114
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
GGFHH GFC DI++ A + RV I+D+DAH GNG ++ SD
Sbjct: 115 YVPLGGFHHALPCRAMGFCPINDIAIA---AKILSKTRRVAILDVDAHHGNGLQRILYSD 171
Query: 214 SRVYI 218
+ I
Sbjct: 172 EVLKI 176
>gi|384176557|ref|YP_005557942.1| acetoin utilization protein AcuC [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595781|gb|AEP91968.1| acetoin utilization protein AcuC [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 387
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L + + IV P AS+E+L +VH++
Sbjct: 6 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFGEGDIVTPRLASEEELSLVHTD 63
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 64 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
+ + A N+GGG HH GFC Y D ++ I Y +Q S RV+ ID DAH G+G
Sbjct: 118 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQY--IQKKYSARVLYIDTDAHHGDG 175
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 176 VQFTFYDNPNVCTLSIHETGRY 197
>gi|422910892|ref|ZP_16945520.1| histone deacetylase domain protein [Vibrio cholerae HE-09]
gi|424660555|ref|ZP_18097802.1| histone deacetylase domain protein [Vibrio cholerae HE-16]
gi|341632766|gb|EGS57623.1| histone deacetylase domain protein [Vibrio cholerae HE-09]
gi|408050285|gb|EKG85450.1| histone deacetylase domain protein [Vibrio cholerae HE-16]
Length = 306
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPVAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|444375853|ref|ZP_21175105.1| Histone deacetylase/AcuC/AphA family protein [Enterovibrio sp.
AK16]
gi|443680081|gb|ELT86729.1| Histone deacetylase/AcuC/AphA family protein [Enterovibrio sp.
AK16]
Length = 306
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P Y S + + H + K+ + + + G+ +P + L H
Sbjct: 2 LPIIYHPIY--SDFPLPEGHRYPLQKYRLLKEHIDEMGW--PVTTFQPTRLDHQHLKRFH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+ +L S +P V + FP L+QR + +GGT L A
Sbjct: 58 DNDYVDALVSG-------SLPLVKMRRIGFPWSEALIQRSL-----TSLGGTTLTVDKAI 105
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
E G A+++ GG+HH D G GFC + D+ L +A NI +V+I+D D H G+G
Sbjct: 106 EHGVAVHLTGGYHHSHKDFGSGFCLFNDLILAADHALSYPNIDKVLIVDCDVHHGDG 162
>gi|332140462|ref|YP_004426200.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327550484|gb|AEA97202.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
Length = 224
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L A LA + G A+N+ GG+HH AD G GFC + D+
Sbjct: 2 RRIGFPWSQQLIERTRTAVAGTCLTASLALQHGKALNLTGGYHHAFADFGSGFCLFNDLY 61
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
L I V+I+DLD HQG+G K +D ++ L + +P
Sbjct: 62 LAAKTMQKSSAIDNVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFP 111
>gi|296283064|ref|ZP_06861062.1| hypothetical protein CbatJ_05560 [Citromicrobium bathyomarinum
JL354]
Length = 294
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P + GGT LAA+LA G+A N G HH D G GFC + D+
Sbjct: 64 ERRIGFPVTPHIAQRVAHTNGGTWLAARLAMRHGYAANSAAGSHHALYDTGAGFCVFNDL 123
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
++C + Q + RV+I+D D HQG+G + V+ L + +P
Sbjct: 124 AVCANRLIAQGDARRVLIVDCDVHQGDGTAALTAGREDVFTLSLHAEKNFP 174
>gi|288817679|ref|YP_003432026.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|384128440|ref|YP_005511053.1| histone deacetylase [Hydrogenobacter thermophilus TK-6]
gi|288787078|dbj|BAI68825.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|308751277|gb|ADO44760.1| Histone deacetylase [Hydrogenobacter thermophilus TK-6]
Length = 375
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
HP + + +FL + G +++ I++ EA++E+LL+ H+E YL++L+ S +
Sbjct: 19 HPLRIPRVSLLIEFLKAMGLIEEQEIIQSREATEEELLLYHTEDYLRALEESDRCMCVKD 78
Query: 113 ---EVPPVALFPNCL---VQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
E + + N + + R L G ++ A ++ E G A N GG HH
Sbjct: 79 RYREKYNIGTYENPVSPAMWRGSLLA----TGSSVQAVEVFLEGGVAFNPAGGMHHAYPS 134
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC D ++ I + + +++ IDLDAH + ++ + D V++L +
Sbjct: 135 RANGFCFINDPAVSIEF-LKKKGFKKILYIDLDAHHCDAIQESYYQDDSVFVLSL 188
>gi|418575874|ref|ZP_13140021.1| acetoin utilization protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325622|gb|EHY92753.1| acetoin utilization protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 382
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L G L I+ P A+ E+L ++HS Y+++++ +S + +
Sbjct: 22 HPFNQMRLKLTTELLLDLGSLKPEHIITPRIATDEELSLIHSYDYIQAIRRASHGILNLK 81
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILA---AKLAKERGWAINVGGGFHHCSADEGG 169
E L + +Q + ++ ++ G L A + K ++GGG HH
Sbjct: 82 EAKKYGLDGDDTLQFRRMHQHSARIVGGALNLADAIMDKSVKNGCHLGGGLHHSLPGRAN 141
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ I Y N RV+ ID DAH G+G + F ++ + I + G
Sbjct: 142 GFCIYNDVAITIAYLIKHYN-QRVLCIDTDAHHGDGTQWSFYTEDQALIYSIHETG 196
>gi|73662337|ref|YP_301118.1| acetoin utilization protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494852|dbj|BAE18173.1| acetoin utilization protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 385
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L G L I+ P A+ E+L ++HS Y+++++ +S + +
Sbjct: 25 HPFNQMRLKLTTELLLDLGSLKPEHIITPRIATDEELSLIHSYDYIQAIRRASHGILNLQ 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILA---AKLAKERGWAINVGGGFHHCSADEGG 169
E L + +Q + ++ ++ G L A + K ++GGG HH
Sbjct: 85 EAKKYGLDGDDTLQFRRMHQHSARIVGGALNLADAIMDKSVKNGCHLGGGLHHSLPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ I Y N RV+ ID DAH G+G + F ++ + I + G
Sbjct: 145 GFCIYNDVAITIAYLIKHYN-QRVLCIDTDAHHGDGTQWSFYTEDQALIYSIHETG 199
>gi|114563800|ref|YP_751313.1| histone deacetylase superfamily protein [Shewanella frigidimarina
NCIMB 400]
gi|114335093|gb|ABI72475.1| histone deacetylase superfamily [Shewanella frigidimarina NCIMB
400]
Length = 307
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P +Y Y S L + H F ++K+ + Q + L + P SK+ L
Sbjct: 3 LSIPFVYHASY--SQLALPSTHRFPTTKYHNLYQHALKQQLLFEQYRHTPTPISKDTLYT 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
VH Y++ + AL + QR++ +P+ ++ V GT L A
Sbjct: 61 VHCPQYVEQFING------------AL--DHKAQRRIGFPWSQELVTRTLHAVNGTRLCA 106
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA + G A+++ GG+HH D G GFC + D+ + A +V+I D D HQG+
Sbjct: 107 ELALDHGIAVHLTGGYHHAHYDFGSGFCIFNDLVIAARSAIDSGRADKVLIFDCDVHQGD 166
Query: 205 G 205
G
Sbjct: 167 G 167
>gi|452749112|ref|ZP_21948882.1| histone deacetylase family protein [Pseudomonas stutzeri NF13]
gi|452006938|gb|EMD99200.1| histone deacetylase family protein [Pseudomonas stutzeri NF13]
Length = 306
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L + G + ++ P S + L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTEAALLRPALCSHDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H +Y++ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDRNYVERYCSGAMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDG 164
>gi|410643523|ref|ZP_11354019.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
gi|410136933|dbj|GAC12206.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
Length = 305
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 54 HPFDSSKWGRIC-QFLSS--EGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-PNVS 109
HP S+ I Q ++S + +DK + +A+KE L + H ++Y+ S+ +S P
Sbjct: 20 HPESPSRLHAINDQLIASRLDAIIDKQ---QATQATKEQLYLAHDKAYVDSVFASVPEQG 76
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-----AKERGWAINVGGGFHHCS 164
I+ P L P L LY G ++A L A++ A+ G HH
Sbjct: 77 IVELAPDTQLGPRSL--EAALY----AAGANVMAVDLVMQGKAQQAFCAVRPPG--HHAE 128
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
+ GFC + +I++ HYA Q + R+ IID D H GNG E F D RV F
Sbjct: 129 YAKAMGFCFFNNIAVAAHYAMAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFES 188
Query: 225 GIYP 228
+P
Sbjct: 189 PFFP 192
>gi|50745636|ref|XP_420178.1| PREDICTED: histone deacetylase 8 [Gallus gallus]
Length = 368
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + K+ + + + + LD I++P AS E++ H+++
Sbjct: 10 VYSPEYAALCDSLCKV----PKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHTDA 65
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAK--LAKERGW 152
YL+ LQ S E L +C + + + VGG TI AA+ L +
Sbjct: 66 YLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLLDGKCKV 124
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ R++ IDLD H G+G E FS
Sbjct: 125 AINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRQKFDRILYIDLDLHHGDGVEDAFSF 182
Query: 213 DSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 183 TSKVMTVSLHKFSPGFFP 200
>gi|456861311|gb|EMF79988.1| histone deacetylase family protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 203
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
+GGTILA +L + + ++GGGFHH D GFC D ++ + +++ I
Sbjct: 1 MGGTILATELTGKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQKAYPGRKILFI 60
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
DLD HQGNG+ F DS V+ M +YP+
Sbjct: 61 DLDLHQGNGNSVIFQEDSDVFTFSMHQENLYPK 93
>gi|379723016|ref|YP_005315147.1| acetoin utilization protein AcuC [Paenibacillus mucilaginosus 3016]
gi|378571688|gb|AFC31998.1| acetoin utilization protein AcuC [Paenibacillus mucilaginosus 3016]
Length = 398
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + L G L +C+ P+ E L VH++ Y++++ +++
Sbjct: 28 HPFNQKRLLLTVDLLRRAGALPASCLEPPMPVDPEKLCTVHAKEYVEAV-----IALSHP 82
Query: 114 VPPVALFPNCLVQRKVLY-------PF--------RKQVGGTILA--AKLAKERGWAINV 156
+P A ++R Y PF VGG++ A A + A+++
Sbjct: 83 MPDEAW-----MRRAATYGLDTEDTPFFHGMHEATSTVVGGSVQAVDAVMTGRTPHALHL 137
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGG HH + +G GFC Y D S+ I +A + +RV+ ID D H G+G + F +D V
Sbjct: 138 GGGLHHALSGKGAGFCVYNDASVAIEHAKCEYG-ARVLYIDTDVHHGDGVQWSFYTDPDV 196
Query: 217 YILDMFNPGIY 227
+ G Y
Sbjct: 197 CTFSIHETGKY 207
>gi|375130376|ref|YP_004992476.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii NCTC
11218]
gi|315179550|gb|ADT86464.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii NCTC
11218]
Length = 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP + L++R + GGT L A+LA E G AI++ GG+HH D G GFC Y D+
Sbjct: 86 FPWSDALIERTL-----TSAGGTCLTAQLAVEHGVAIHLSGGYHHAHRDFGSGFCLYNDL 140
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNG 205
L H A + I +V+I+D D H G+G
Sbjct: 141 VLAAHQALLLDGIDKVLIVDSDVHHGDG 168
>gi|295695266|ref|YP_003588504.1| histone deacetylase [Kyrpidia tusciae DSM 2912]
gi|295410868|gb|ADG05360.1| Histone deacetylase [Kyrpidia tusciae DSM 2912]
Length = 391
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++YSP+ G E HPFD + + G L + P A++E+L +VH
Sbjct: 7 IVYSPEVLRYRFGPE--HPFDPLRLRMTWDLMQESGLLRPEHVRAPQSATEEELALVHDR 64
Query: 97 SYLKSLQSSPNV---------------SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI 141
Y+++++ + S + +FP+ ++ GGT+
Sbjct: 65 HYIEAVKRAGQGDEPPVPPGGGEPSWESFGLGTEDTPIFPDMHEASSLI------AGGTL 118
Query: 142 LAAKLAKERGWAINV---GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
+AA+L E G A +V GG HH GFC Y DI + I + + + +RV ID
Sbjct: 119 MAARLVME-GKAEHVFSLAGGLHHAQRHMASGFCVYNDIGVAIAWLRKEFD-ARVAYIDT 176
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
DAH G+G + F D V + G Y
Sbjct: 177 DAHHGDGVQWLFYDDPGVLTISFHETGKY 205
>gi|221057225|ref|XP_002259750.1| histone deacetylase [Plasmodium knowlesi strain H]
gi|193809822|emb|CAQ40526.1| histone deacetylase, putative [Plasmodium knowlesi strain H]
Length = 471
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE--DLLVV 93
P ++ P Y S EK H F K+ +I L G + + + S+ L +
Sbjct: 178 PYVFHPIYS-SVPMKEKYHRFKMKKYEKIFSRLIEGGIYNSDYSIPSCNISEMIVPLFNI 236
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E +++ + S + +E + L P V R ++ ++ GTIL++ LA +
Sbjct: 237 HDEKFIEEIFSIVTHNKQVEKYELTLHPY-FVCRYLI-----EINGTILSSLLAMKYFMC 290
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 291 MHIGGGNHHSKKNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 350
Query: 214 SRVYILDM 221
+ V + +
Sbjct: 351 TNVKTISL 358
>gi|456013463|gb|EMF47112.1| NAD-independent protein deacetylase AcuC [Planococcus
halocryophilus Or1]
Length = 392
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
+ HPF+ + L L + IV A+ E+LL+ H + Y+ ++ + I
Sbjct: 28 ETHPFNQKRLVLTIDLLKQMNALSSDLIVPARIATDEELLLAHDQRYIDIVKKASRGEIT 87
Query: 112 --------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFH 161
I +F N L VGGT+ A E A+N+GGG H
Sbjct: 88 PEAGESYGIGTDDTPIFENMHEASARL------VGGTLTAVDYVMEGKAQHALNLGGGLH 141
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D S+ I+Y + N +RV+ ID DAH G+G + F D V + +
Sbjct: 142 HGFRGKASGFCIYNDSSVAINYLKTKYN-ARVLYIDTDAHHGDGVQWSFYDDPDVCTVSI 200
Query: 222 FNPGIY 227
G Y
Sbjct: 201 HETGRY 206
>gi|433603566|ref|YP_007035935.1| Deacetylase superfamily [Saccharothrix espanaensis DSM 44229]
gi|407881419|emb|CCH29062.1| Deacetylase superfamily [Saccharothrix espanaensis DSM 44229]
Length = 391
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D SFL + HP + + + ++ G LD +V+P A+ ++ VH +YL
Sbjct: 9 WDESFLAYDLGGDHPLNPVRLDLAVRLATALGVLDGVDLVKPDPATDAEIERVHEPAYLS 68
Query: 101 SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGG 158
++Q++P + + N + R + VGG++ AA+ + E A+N+ G
Sbjct: 69 AVQAAPMAGWDVGHG-LGTADNPVFAR-MHEASALAVGGSLAAARKIASGEARRAVNIAG 126
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI 218
G HH D GFC Y D S+ I + + R+ ID D H G+G + F D RV
Sbjct: 127 GLHHAMRDHAAGFCVYNDCSVAISW-LLDNGFDRIAYIDSDVHHGDGVQDAFYDDPRVLT 185
Query: 219 LDMF-NP 224
+ + NP
Sbjct: 186 VSLHQNP 192
>gi|348171382|ref|ZP_08878276.1| acetoin dehydrogenase [Saccharopolyspora spinosa NRRL 18395]
Length = 391
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
+D S LG + HP + + S G L+ +++P A+ DL VH+ Y+
Sbjct: 9 WDESVLGYDLGGHHPLHPIRLELTMRLARSLGVLEGVEMIKPEPATDADLERVHTAEYMA 68
Query: 101 SLQSSP----NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+++S+P V + +F ++ + I+ K + A+N+
Sbjct: 69 AVRSAPLAGWEVGHGLGTDDNPIFDRMHEASALIAGASIRAAEQIVLGKADR----AVNI 124
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GG HH AD GFC Y D S+ I + Q + R+ +D+D H G+G + F DSRV
Sbjct: 125 AGGLHHAMADRAAGFCVYNDCSVAIAWMLEQ-GVERIAYLDIDVHHGDGVQAAFYDDSRV 183
Query: 217 YILDM 221
+ +
Sbjct: 184 MTISL 188
>gi|126665978|ref|ZP_01736958.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Marinobacter sp. ELB17]
gi|126629300|gb|EAZ99917.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Marinobacter sp. ELB17]
Length = 308
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
HP + I +L+ V P E +++ LL+VH ESYLK L P +
Sbjct: 20 HPERPERMAAIQSYLADTALNQDLDYVRPDEITRDQLLIVHPESYLKQLDMMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L ++ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAARLAAGANIQAVDMVMSSQVTNAFVCARPPG---HHAERSKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +++L A + RV IID D HQGNG D R+ + F YP +
Sbjct: 137 FYNNVALAAMRALSFHRLERVAIIDFDVHQGNGTVDIVGGDERILMCSSFQHPFYPHTHV 196
Query: 233 ARR 235
R+
Sbjct: 197 HRQ 199
>gi|323488424|ref|ZP_08093671.1| acetoin utilization protein [Planococcus donghaensis MPA1U2]
gi|323397931|gb|EGA90730.1| acetoin utilization protein [Planococcus donghaensis MPA1U2]
Length = 383
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
+ HPF+ + L L + IV A+ E+LL+ H + Y+ ++ + I
Sbjct: 19 ETHPFNQKRLVLTIDLLKKMNALSSDSIVPARIATDEELLLAHDQRYIDIVKKASRGEIT 78
Query: 112 --------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFH 161
I +F N L VGGT+ A E A+N+GGG H
Sbjct: 79 PEAGESYGIGTDDTPIFENMHEASARL------VGGTLTAVDYVMEGKAQHALNLGGGLH 132
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D S+ I+Y + N +RV+ ID DAH G+G + F D V + +
Sbjct: 133 HGFRGKASGFCIYNDSSVAINYLKTKYN-ARVLYIDTDAHHGDGVQWSFYDDPDVCTVSI 191
Query: 222 FNPGIY 227
G Y
Sbjct: 192 HETGRY 197
>gi|403668493|ref|ZP_10933763.1| acetoin utilization protein [Kurthia sp. JC8E]
Length = 392
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+YSPD E HPF+ + L + G L IV P A+ E+L +V
Sbjct: 13 FVYSPDQLTYKFSDE--HPFNQKRLQLTMTLLEAIGALSPEQIVAPRIATDEELALVFDR 70
Query: 97 SYLKSLQSSPNVSIIIE--------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
+Y+ ++ + + +E +FPN + VG T+ A +
Sbjct: 71 TYIDIVRRAGHGYATVEEGEPYGIGTEDTPIFPNMHEASASI------VGATLTACDYVM 124
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ A+N+GGG HH ++ GFC Y D S+ I Y + N +RV+ +D DAH G+G
Sbjct: 125 QGKSQHAVNLGGGLHHGFKNKASGFCIYNDSSVAIKYMQKKYN-ARVLYVDTDAHHGDGV 183
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F D + G Y
Sbjct: 184 QFTFYDDPNACTFSIHETGRY 204
>gi|418427866|ref|ZP_13000870.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS2]
gi|387717742|gb|EIK05741.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus VRS2]
Length = 389
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHVSH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
N + + R VGG + A L G +N +GGG HH
Sbjct: 84 DEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKVLNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETG 199
>gi|320451028|ref|YP_004203124.1| acetoin utilization protein AcuC [Thermus scotoductus SA-01]
gi|320151197|gb|ADW22575.1| acetoin utilization protein AcuC [Thermus scotoductus SA-01]
Length = 374
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G HPF + + L + G + + P EA++ED+L VHSE
Sbjct: 1 MIYRDEYRLYNFGPS--HPFSPVRLEMLTSLLKALGVWREP--LAPPEATREDVLSVHSE 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--LA 147
+K ++++ + ++ L FP ++L VGGT+ A+ LA
Sbjct: 57 RLVKRVEAASRGEGVPDLEHYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRILA 110
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E+ + +GGG HH D GFC Y D+S+ I + V+ + RV +D+D H G+G +
Sbjct: 111 GEKR-VLQLGGGLHHAQYDRSSGFCVYNDLSVAIRH-LVRSGL-RVAYLDIDVHHGDGVQ 167
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ V + + G Y
Sbjct: 168 WIHYEEKEVLTISLHESGRY 187
>gi|344167758|emb|CCA80001.1| Histone deacetylase [blood disease bacterium R229]
Length = 324
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+VH+ Y+ ++ + + P QR++ +P+
Sbjct: 44 EAPRAGDDALLLVHAPDYVSAVGAG-------RLDPAR-------QREIGFPWSLAMVER 89
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS- 191
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + + +
Sbjct: 90 SRRSAGATMAACEAAMTDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRWIQRRPGWTP 149
Query: 192 ---RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG +D+ V+ L + YP EA
Sbjct: 150 DGFPVAIVDLDVHQGNGTASILRNDASVFTLSVHGEKNYPFRKEA 194
>gi|260767385|ref|ZP_05876323.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii CIP
102972]
gi|260617620|gb|EEX42801.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii CIP
102972]
Length = 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP + L++R + GGT L A+LA E G AI++ GG+HH D G GFC Y D+
Sbjct: 86 FPWSDALIERTL-----TSAGGTCLTAQLAVEHGVAIHLSGGYHHAHRDFGSGFCLYNDL 140
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNG 205
L H A + I +V+I+D D H G+G
Sbjct: 141 VLAAHQALLLDGIDKVLIVDSDVHHGDG 168
>gi|421898145|ref|ZP_16328512.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206589351|emb|CAQ36313.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 22 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 72
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 73 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAALW--MQRRPGRAPGDF 130
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 131 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEA 172
>gi|121602975|ref|YP_980304.1| histone deacetylase superfamily protein [Polaromonas
naphthalenivorans CJ2]
gi|120591944|gb|ABM35383.1| histone deacetylase superfamily [Polaromonas naphthalenivorans CJ2]
Length = 308
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
I PD + +G HP + G I L +G LD + A+ E L HS
Sbjct: 6 ITHPDCALHEMGAH--HPECPERLGAINDMLLVKGLLDYMHPYDAPLATPEQLAHAHSSL 63
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-----AKERGW 152
Y+ L ++ +V P N R L + G +LA L A
Sbjct: 64 YVSELMAASPAEGYHKVDPDTDM-NPFTVRAAL----RAAGSVVLATDLVLTGDAPSAFC 118
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ G HH D GFC + ++++ I +A Q + RV +ID D H GNG E F
Sbjct: 119 CVRPPG--HHAQRDAAMGFCFFNNVAVGIRHALTQHGLQRVALIDFDVHHGNGSEDIFRG 176
Query: 213 DSRVYILDMFNPGIYP 228
D RV + +F GIYP
Sbjct: 177 DERVLMCSIFEQGIYP 192
>gi|296535922|ref|ZP_06898074.1| DNA helicase RecG [Roseomonas cervicalis ATCC 49957]
gi|296263747|gb|EFH10220.1| DNA helicase RecG [Roseomonas cervicalis ATCC 49957]
Length = 377
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+LD ++ A E+L H +Y+ +LQ + + E
Sbjct: 22 HPLAIPRVSTALDLIRALGWLDPARYIDSPMARPEELTRFHDPAYIAALQQAEALGQATE 81
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINV-GGGFHHCSADE 167
+ + + +Y FR+ GG +LAA+L E G A++V GGG HH D
Sbjct: 82 A--MRARHDIGARGNPVYAEIFRRPATSAGGVLLAARLTAEGG-AVHVPGGGTHHGRPDR 138
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC D L + A+ + ++ +D+DAH G+G + F+ D RV+ + + G +
Sbjct: 139 ASGFCYLNDAVLGL-LAWCDQGLENILYLDIDAHHGDGVQDAFADDPRVFTVSVHEAGRW 197
Query: 228 PR 229
P+
Sbjct: 198 PQ 199
>gi|404396176|ref|ZP_10987971.1| hypothetical protein HMPREF0989_05014 [Ralstonia sp. 5_2_56FAA]
gi|404278975|gb|EJZ44406.1| hypothetical protein HMPREF0989_05014 [Ralstonia sp. 5_2_56FAA]
Length = 335
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y++++ + + P QR++ +P+
Sbjct: 57 EAPRADDDALLLAHTFEYVEAVSAG-------RLDPAR-------QREIGFPWSPEMVER 102
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 103 SRRSAGATMAACDAALADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRQSGR 160
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 161 TPGDFPVAIVDLDVHQGNGTASILRDDATVFTLSLHGEKNYPFRKEA 207
>gi|108758575|ref|YP_628878.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108462455|gb|ABF87640.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 586
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P Y Y + GIE + +L L + P S +L VH
Sbjct: 17 VPAFYDESYRLPLTGIESSAGIEPRGVDFTTWYLLEARALRTQDVHHPQPVSLAELSRVH 76
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER-GWA 153
+YL+SL ++ I P + + L L R+ GGT+ AA+LA R G
Sbjct: 77 DAAYLESLGQPETLARIFATDPADVPVDAL-----LSNLRRVCGGTLGAARLAVARKGPV 131
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N+ GGFHH GGGFCA DI++ + + +++DLDAH +G + +
Sbjct: 132 VNMAGGFHHAGPARGGGFCAVNDIAIALAALHADGFDGQAVVLDLDAHPPDGTAECLAGQ 191
Query: 214 SRVYI 218
R +I
Sbjct: 192 KRAWI 196
>gi|298675423|ref|YP_003727173.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298288411|gb|ADI74377.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY PDY G HP S + ++L + + +VEP A + +H+
Sbjct: 4 IIYHPDYLKHNTG---NHPESSIRLSHAVEYLEKQDVFKNHPLVEPNTAEISQIQTIHTP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN- 155
Y+K ++ N E+P L P+ +V + GG+I A A
Sbjct: 61 DYIKKVEYHCNN----EIP---LDPDTVVSKDSYRAALLAAGGSIRAVNETYTNNSAFAL 113
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
V HH +D GFC + +I++ YA Q + RV+IID D H GNG + F SDS
Sbjct: 114 VRPPGHHAESDRAKGFCLFNNIAIAAKYAQSQ-GMKRVLIIDWDVHHGNGTQHSFYSDST 172
Query: 216 V 216
V
Sbjct: 173 V 173
>gi|414161081|ref|ZP_11417344.1| acetoin utilization protein AcuC [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876760|gb|EKS24658.1| acetoin utilization protein AcuC [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 384
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L G L + I+ P A+ E+L ++HS Y+ +++ +S + +
Sbjct: 25 HPFNQMRLKLTTELLIDAGLLSSSQIITPRIATDEELTLIHSYDYVNAIKHASRGILSEV 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTILAAKL--AKERGWAINVGGGFHHCSADEGG 169
E Q K ++ + VGG + A + E ++GGG HH
Sbjct: 85 ESKKYGFANEDTSQFKHMHQHSARIVGGALKLADMIVQGEVKNGCHLGGGLHHALPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC Y DI++ Y + N+ +VMIID DAH G+G + F + + +
Sbjct: 145 GFCIYNDIAITAKYLSERYNM-KVMIIDTDAHHGDGVQWSFYTQNEI 190
>gi|254283147|ref|ZP_04958115.1| deacetylase, including yeast histone deacetylase and acetoin
utilization protein [gamma proteobacterium NOR51-B]
gi|219679350|gb|EED35699.1| deacetylase, including yeast histone deacetylase and acetoin
utilization protein [gamma proteobacterium NOR51-B]
Length = 304
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVE--PLEASKEDLLVVHSESYLKSLQS-SPNVSI 110
HP + + L GFL ++C V PL AS DL VH+ +YL+ L++ SP +
Sbjct: 18 HPERPDRLRGVWAHLERTGFL-QDCEVRDAPL-ASAHDLGAVHAGAYLEQLRALSPEQGL 75
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ P AL P L +LA + A A+ G HH +D G
Sbjct: 76 VQVDPDTALCPASLAAATRAAGAVVDGTRAVLAGE-ADSVFCAVRPPG--HHAESDAAMG 132
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + +++ H++ Q I RV I+D D H GNG + F+ D RV + F YP
Sbjct: 133 FCLFNSVAVAAHFSLGQPGIERVAILDFDVHHGNGTVQIFADDPRVLVCSSFQYPFYPGR 192
Query: 231 YE 232
Y+
Sbjct: 193 YD 194
>gi|104779963|ref|YP_606461.1| histone deacetylase family hydrolase [Pseudomonas entomophila L48]
gi|95108950|emb|CAK13646.1| putative hydrolase; histone deacetylase family protein [Pseudomonas
entomophila L48]
Length = 304
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPDHRFPMDKFRLLRDHLVDSGLTTDQALLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++L A+LA + G
Sbjct: 60 DRDYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAELALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 VACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|384440597|ref|YP_005655321.1| histone deacetylase [Thermus sp. CCB_US3_UF1]
gi|359291730|gb|AEV17247.1| Histone deacetylase [Thermus sp. CCB_US3_UF1]
Length = 294
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+ + + L G L I+ E +E L + H +YL+ L + + S+
Sbjct: 17 HPFPLYKYRGVAEAL--RGLL---PILPAPEVPREALYLAHQGAYLERLFTQGLTREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA+ A + G +N+ GG HH D G
Sbjct: 72 RLGLP----FHPALLRRAL-----HAAGGTLAAAEDALDTGLGLNLSGGTHHAFPDRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ + D+++ + + + R +++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVALAWLRAKRGFGGRALVLDLDAHQGNGTAVFFGEDPTVFTLSLHGERNYP 181
>gi|386725805|ref|YP_006192131.1| acetoin utilization protein AcuC [Paenibacillus mucilaginosus K02]
gi|384092930|gb|AFH64366.1| acetoin utilization protein AcuC [Paenibacillus mucilaginosus K02]
Length = 398
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + L G L +C+ P+ E L VH++ Y++++ +++
Sbjct: 28 HPFNQKRLLLTVDLLRRAGALPASCLEPPMPVDPEKLCTVHAKEYVEAV-----IALSHP 82
Query: 114 VPPVALFPNCLVQRKVLY-------PF--------RKQVGGTILA--AKLAKERGWAINV 156
+P A ++R Y PF VGG++ A A + A+++
Sbjct: 83 MPDEAW-----MRRAATYGLDTEDTPFFHGMHEATSTVVGGSVQAVDAVMTGRTPHALHL 137
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGG HH + +G GFC Y D S+ I +A + +RV+ ID D H G+G + F +D V
Sbjct: 138 GGGLHHALSGKGAGFCVYNDASVAIEHAKCEYG-ARVLYIDTDVHHGDGVQWSFYTDPDV 196
Query: 217 YILDMFNPGIY 227
+ G Y
Sbjct: 197 CTFSIHETGKY 207
>gi|332306071|ref|YP_004433922.1| histone deacetylase superfamily protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173400|gb|AEE22654.1| histone deacetylase superfamily [Glaciecola sp. 4H-3-7+YE-5]
Length = 301
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 54 HPFDSSKWGRIC-QFLSS--EGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-PNVS 109
HP S+ I Q ++S + +DK + +A+KE L + H ++Y+ S+ +S P
Sbjct: 16 HPESPSRLHAINDQLIASRLDAIIDKQ---QATQATKEQLYLAHDKAYVDSVFASVPEQG 72
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-----AKERGWAINVGGGFHHCS 164
I+ P L P L LY G ++A L A++ A+ G HH
Sbjct: 73 IVELAPDTQLGPRSL--EAALY----AAGANVMAVDLVMQGKAQQAFCAVRPPG--HHAE 124
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
+ GFC + +I++ HYA Q + R+ IID D H GNG E F D RV F
Sbjct: 125 YAKAMGFCFFNNIAVAAHYAMAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFES 184
Query: 225 GIYP 228
+P
Sbjct: 185 PFFP 188
>gi|325271806|ref|ZP_08138273.1| histone deacetylase superfamily protein [Pseudomonas sp. TJI-51]
gi|324103053|gb|EGC00433.1| histone deacetylase superfamily protein [Pseudomonas sp. TJI-51]
Length = 304
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + S + +P + L +R V + VGG++L A+LA + G
Sbjct: 60 DRDYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAELALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 VACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVQRVLIFDCDVHQGDG 164
>gi|379709873|ref|YP_005265078.1| acetoin dehydrogenase [Nocardia cyriacigeorgica GUH-2]
gi|374847372|emb|CCF64442.1| Acetoin dehydrogenase [Nocardia cyriacigeorgica GUH-2]
Length = 418
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-----PNV 108
HP ++ S G LD ++EP A +LL +H+ Y+ +++ + P+
Sbjct: 29 HPMKPARLAYTMALARSLGVLDGVELLEPAAAGAPELLRIHTADYIDAVEHAVAPPMPHG 88
Query: 109 SIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGW-AINVGGG 159
+ PP L FP V+ VGGT+ AA+ +A+ R A+++GGG
Sbjct: 89 QAPL-APPYGLGSADNPVFPGMHRAASVI------VGGTLAAARAIAEGRTRRAVSIGGG 141
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH GFC Y D ++ I + + R+ +D+D H G+G + F +D RV +
Sbjct: 142 MHHAMPASAAGFCVYNDAAVAISW-LLDHGFDRIAYLDVDVHHGDGVQHAFYADPRVLTI 200
Query: 220 DMFN 223
+
Sbjct: 201 SIHQ 204
>gi|91788947|ref|YP_549899.1| histone deacetylase superfamily protein [Polaromonas sp. JS666]
gi|91698172|gb|ABE45001.1| histone deacetylase superfamily [Polaromonas sp. JS666]
Length = 337
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 41/203 (20%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + L SE L + + AS +L +VH+ +Y++++
Sbjct: 40 HRFPMGKYKLLRDRLISE--LPHVQMAQAPAASDGELALVHTPAYIEAITHG-------S 90
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLA-----KERGWAINVGGGF 160
+PP A QR++ +P+ R+ G T+ AA++A + +G A N+ GG
Sbjct: 91 LPPAA-------QREIGFPWSPGMAERARRSAGATVAAARVALGTGTRPQGVAANMAGGT 143
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISR----------VMIIDLDAHQGNGHEKDF 210
HH A +G GFC + D ++ +Q R V +IDLD HQGNG F
Sbjct: 144 HHAYAHKGSGFCVFNDSAVTAR--LMQAEWGRRHRPDRKPLQVAVIDLDVHQGNGTAHIF 201
Query: 211 SSDSRVYILDMFNPGIYPRDYEA 233
++D V+ L + +P EA
Sbjct: 202 ANDPSVFTLSLHGQKNFPFRKEA 224
>gi|320156918|ref|YP_004189297.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
MO6-24/O]
gi|319932230|gb|ADV87094.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
MO6-24/O]
Length = 312
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SQLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +++
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEKLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHASVDKVLIIDS 164
Query: 199 DAHQGNG 205
D H G+G
Sbjct: 165 DVHHGDG 171
>gi|399522038|ref|ZP_10762703.1| histone deacetylase superfamily protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110073|emb|CCH39263.1| histone deacetylase superfamily protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 311
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + L G + P E L +VH
Sbjct: 8 LPLVYHEDYSPPF---PAGHRFPMEKFRLLRDHLVDSGLTTDAALQRPELCPAEILALVH 64
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ + +S + + + L QR V + VGG++L A+LA G A
Sbjct: 65 CPDYIARYMAG-ELSYEDQRRLGLPWSDALAQRTV-----RAVGGSLLTAELALRHGLAC 118
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 119 HLAGGTHHAHYDFPSGFCIFNDLAVIARYLLEAGRVHRVLIFDCDVHQGDG 169
>gi|254428920|ref|ZP_05042627.1| Histone deacetylase family, putative [Alcanivorax sp. DG881]
gi|196195089|gb|EDX90048.1| Histone deacetylase family, putative [Alcanivorax sp. DG881]
Length = 302
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F G H F K+ R+ L S G + P A L H
Sbjct: 2 LPLVYHPEYSFPFPGK---HRFPMEKFARLHGHLRSRGIAHGDNEFRPGRAKATLLSQAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ ++ + + + + L++R + P GT++ A+LA ++G A
Sbjct: 59 CPQYVSAMVDGTLDARALRRMGLP-WSEALMKRSCIAPM-----GTLMTAQLALQQGVAC 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH + G GFC + D + + + + + ++ D D HQG+G + +
Sbjct: 113 HLAGGTHHAHYNFGSGFCIFNDQAFAVRQLLDRGVVKKALMFDCDVHQGDGTAAMLADEP 172
Query: 215 RVY 217
R +
Sbjct: 173 RAF 175
>gi|453363977|dbj|GAC80292.1| putative acetoin utilization protein [Gordonia malaquae NBRC
108250]
Length = 414
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + S G LD EPL L VH+ SY+ ++++ + +
Sbjct: 20 HPMSPIRLALTMSLSRSLGLLDDVEPAEPLPVDDTILSTVHTRSYIDAVRAVGSGATASN 79
Query: 114 VPPVALFPNCLVQR---------KVLYPFRKQ----VGGTILAAKL----AKERGWAINV 156
N L+QR V + VGGT+ AA+ A R A+N+
Sbjct: 80 --------NALLQRLFGLGNDDNPVFESMHEAGSMLVGGTLAAAQAITSGAVTR--AVNI 129
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGG HH GFC Y D S+ I + Q R+ +D+DAH G+G + F SD RV
Sbjct: 130 GGGMHHAMPGHAAGFCIYNDCSIAIEWLLAQ-GYDRIAYVDIDAHHGDGVQHQFYSDPRV 188
Query: 217 YIL 219
+
Sbjct: 189 MTI 191
>gi|326918856|ref|XP_003205702.1| PREDICTED: histone deacetylase 8-like [Meleagris gallopavo]
Length = 364
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + LD I++P AS E++ H+++YL+ LQ S E L +C
Sbjct: 31 LIEAYSLLDHMMIIKPKVASMEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCP 90
Query: 125 VQRKVLYPFRKQVGG-TILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
+ + + VGG TI AA+ L + AIN GG+HH DE GFC D L I
Sbjct: 91 ATEGI-FDYAAAVGGATITAAQCLLDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGI 149
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ R++ IDLD H G+G E FS S+V + + F+PG +P
Sbjct: 150 --LRLRQKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFP 196
>gi|229916428|ref|YP_002885074.1| histone deacetylase superfamily protein [Exiguobacterium sp. AT1b]
gi|229467857|gb|ACQ69629.1| histone deacetylase superfamily [Exiguobacterium sp. AT1b]
Length = 389
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP------- 106
HPF+ + L + G L K+ V P AS E L +VH Y++++Q++
Sbjct: 20 HPFNPLRLELTTSLLIAAGKLSKSECVSPPLASVEALALVHDLDYIEAVQAAAAGELSTL 79
Query: 107 ---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI----LAAKLAKERGWAINVGGG 159
+ E P+ FP L VGGTI L A ER A +VGGG
Sbjct: 80 KANKFGLGTEDTPI--FPTIHEGAARL------VGGTIHALDLVASGKAER--AFHVGGG 129
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH + GFC Y D ++ I + Q SRV+ +D DAH G+G + F D V L
Sbjct: 130 LHHGMRRKASGFCVYNDAAVAIAHVRKQYG-SRVLYVDTDAHHGDGVQWLFYDDDDVMTL 188
Query: 220 DMFNPGIY 227
+ G Y
Sbjct: 189 SIHETGRY 196
>gi|378549014|ref|ZP_09824230.1| hypothetical protein CCH26_02965 [Citricoccus sp. CH26A]
Length = 409
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 43 YDISFLGIE--KLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHSESY 98
+D + L E + HP + + + G +D+ I+ P AS E L VH Y
Sbjct: 15 WDEALLKYEFSRAHPMAPVRLDLTHRLAEALGLMDREGLRIIRPEVASDELLASVHDPEY 74
Query: 99 LKSLQS--------SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAK 148
+++++S +V + + PV FP+ + +GG++ AA+ A
Sbjct: 75 VRAVRSVSSGEVEHRRDVGLGSDDNPV--FPHMHEAAA------RILGGSVAAAEAIWAG 126
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E A+N+ GG HH + + GFC Y D + I + L RV +DLDAH G+G E
Sbjct: 127 EVRHAVNIAGGLHHAARGQASGFCVYNDCAAAIQR-LLDLGAERVAYVDLDAHHGDGVES 185
Query: 209 DFSSDSRVYILDMFNPGI 226
F D RV + + GI
Sbjct: 186 MFWHDPRVLTISVHETGI 203
>gi|149181079|ref|ZP_01859579.1| acetoin utilization protein [Bacillus sp. SG-1]
gi|148851166|gb|EDL65316.1| acetoin utilization protein [Bacillus sp. SG-1]
Length = 391
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII-- 111
HPF+ + L G L+K+ IVEP A+ E+L ++H +++ +++S+ + ++
Sbjct: 22 HPFNQFRLKLTIDLLEEAGALNKDDIVEPRLATDEELHLIHDPAFVSAVKSAGSGTLPQD 81
Query: 112 ------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
I +F ++ VGGT+ A + A + GGG HH
Sbjct: 82 KAESYGIGTEDTPIFKGMHEASALM------VGGTLTAVDCVMGGASKHAAHFGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FKGKASGFCIYNDSSVAIKYMQEKYG-ARVLYVDTDAHHGDGVQWSFYDDPDVCTLSIHE 194
Query: 224 PGIY 227
G Y
Sbjct: 195 TGRY 198
>gi|171463998|ref|YP_001798111.1| histone deacetylase superfamily protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193536|gb|ACB44497.1| histone deacetylase superfamily [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 299
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K R+ +SS+ ++ +VE A+ +L H SYL I+
Sbjct: 17 HRFPMEKHSRLRDLVSSQASIE---LVEVPPATDTQILYAHDPSYL------------IK 61
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+ L + QR++ +P+ R+ G T+ AAK A + G A N+ GG HH
Sbjct: 62 IIDGTL--SAQEQREIRFPWSTLMVERSRRSAGATVAAAKTALKEGIASNLAGGTHHAYR 119
Query: 166 DEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G GFC + D ++ +++ S ++ +IDLD HQGNG +D ++ +
Sbjct: 120 DAGSGFCVFNDSAIADRTLQKEISASLKIAVIDLDVHQGNGTASILQNDDSIFTPSIHGE 179
Query: 225 GIYP 228
+P
Sbjct: 180 NNFP 183
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 28/250 (11%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYF--DIPIFKL-PLIYSPDYDISFLGIEK--LHPFDS 58
SS P T E L+ N ++S KL D+P +L +IY + D + +E+ HP
Sbjct: 402 SSRPPDT--GEILQEN-LMSIKLKASDDLPSDELETIIYFNEGDDAHHDLEEEDRHPEKP 458
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVVHSES---YLKSLQSSPNVSIIIE 113
++ RI + L G LD+ C+ E A+ E++ +VH++ +LK+ +S ++ E
Sbjct: 459 ARTRRILKTLKESGVLDR-CVERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEELMEE 517
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLAKERGWAINVGGGFHHCSADEG 168
F + + + L RK +G + + K A R + V HH SA +
Sbjct: 518 A--QKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKS 575
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM------- 221
GFC + ++++ YA + I RV+I+D D H GNG ++ F D V + +
Sbjct: 576 SGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGN 635
Query: 222 FNPGIYPRDY 231
F P P+DY
Sbjct: 636 FYPVGEPKDY 645
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI 110
K HP + I + L+ L+K + + LE DL + H + + L N +
Sbjct: 32 KDHPESPGRIQSIKEVLTKTKVLEKCQVVTDFLEIDDADLSITHEKEMIAKLMEIENKTQ 91
Query: 111 IIEVPPVALFPNCLVQRKVLYPFR------KQVGGTILAAKLAKERGWAINVGGGFHHCS 164
F + + K R +++ I+A + + G+AI G HH
Sbjct: 92 EEINKECEKFDSIYMTEKSQKAARDGVACVRELTNRIMANEASN--GFAIIRPPG-HHAD 148
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--F 222
D GFC Y + S AF R++I+DLD H GNG ++ F D RV + + +
Sbjct: 149 RDNPSGFCIYNNASQAAEEAFFN-GAERILIVDLDVHHGNGTQRMFYHDKRVLVFSIHRY 207
Query: 223 NPGIY 227
G+Y
Sbjct: 208 EHGLY 212
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 28/250 (11%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYF--DIPIFKL-PLIYSPDYDISFLGIEK--LHPFDS 58
SS P T E L+ N ++S KL D+P +L +IY + D + +E+ HP
Sbjct: 395 SSRPPDT--GEILQEN-LMSIKLKASDDLPSDELETIIYFNEGDDAHHDLEEEDRHPEKP 451
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVVHSES---YLKSLQSSPNVSIIIE 113
++ RI + L G LD+ C+ E A+ E++ +VH++ +LK+ +S ++ E
Sbjct: 452 ARTRRILKTLKESGVLDR-CVERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEELMEE 510
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLAKERGWAINVGGGFHHCSADEG 168
F + + + L RK +G + + K A R + V HH SA +
Sbjct: 511 A--QKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKS 568
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM------- 221
GFC + ++++ YA + I RV+I+D D H GNG ++ F D V + +
Sbjct: 569 SGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGN 628
Query: 222 FNPGIYPRDY 231
F P P+DY
Sbjct: 629 FYPVGEPKDY 638
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI 110
K HP + I + L+ L+K + + LE DL + H + + L N +
Sbjct: 32 KNHPESPGRIQSIKEVLTKTKVLEKCQVVTDFLEIDDADLSITHEKEMIAKLMEIENKTQ 91
Query: 111 IIEVPPVALFPNCLVQRKVLYPFR------KQVGGTILAAKLAKERGWAINVGGGFHHCS 164
F + + K R +++ I+A + + G+AI G HH
Sbjct: 92 EEINKECENFDSIYMTEKSQKAARDGVACVRELTNRIMANEASN--GFAIIRPPG-HHAD 148
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--F 222
D GFC Y + S AF R++I+DLD H GNG ++ F D RV + + +
Sbjct: 149 RDNPSGFCIYNNASQAAEEAFFN-GAERILIVDLDVHHGNGTQRMFYHDKRVLVFSIHRY 207
Query: 223 NPGIY 227
G+Y
Sbjct: 208 EHGLY 212
>gi|301298973|gb|ADK66830.1| putative histone deacetylase superfamily protein [Amphidinium
carterae]
Length = 337
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L E D + PL E LV H +Y++S+ S S +
Sbjct: 59 HRFPIEKYAMVKEILVKE--QDLEVLDGPLATLSETELV-HDAAYVQSISSG---SASEQ 112
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG-WAINVGGGFHHCSADEGGGFC 172
F + VL F VG T+ A + E G W+ V GG HH A G GFC
Sbjct: 113 TRKRVGFSEAPMLPYVLRSF-ASVGATLAATRNCLESGVWSGAVSGGTHHAFASSGEGFC 171
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ DI++ A V I ++++DLD HQGNG F D V+ + YP
Sbjct: 172 VFNDIAVAARLAAVDYGIKSMLVVDLDVHQGNGTAGIFKDDPNVFTFSVHQAKGYP 227
>gi|157106016|ref|XP_001649128.1| histone deacetylase [Aedes aegypti]
gi|108879954|gb|EAT44179.1| AAEL004416-PA [Aedes aegypti]
Length = 355
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP----PVALFPNCLVQRKVLYPFR 134
++ P + EDLL HS Y++ L+ N I EV L +C + KV Y F
Sbjct: 29 VISPKRGTLEDLLSFHSSDYVECLKRYNNEDDIEEVTDELQEFGLAYDCPMIEKV-YDFV 87
Query: 135 KQVGGTILAAKLAKERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
V G+ L+A A G AIN GG+HH D+ GFC DI + IH ++ +
Sbjct: 88 SSVVGSTLSAVDAILEGASIAINWHGGWHHAQRDKAAGFCYVNDIVIGIHK--LRTKFQK 145
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFN--PGIYP 228
V+ +DLD H G+G E FS V + PG +P
Sbjct: 146 VLYLDLDVHHGDGVEDAFSFSKYVMTVSFHQHEPGYFP 183
>gi|269962118|ref|ZP_06176472.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833202|gb|EEZ87307.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 306
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + H + K+ + Q L+SE + + +P S +D+
Sbjct: 2 LPLIYHPIY--SQLDLPDGHRYPIMKYRYLYQAVMEKLASEDWGGQIECFQPSPLSTDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHDGEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH + G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKNFGSGFCLFNDLAIAAKHMLDNEHVDKVMIIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|343506193|ref|ZP_08743701.1| histone deacetylase/AcuC/AphA family protein [Vibrio ichthyoenteri
ATCC 700023]
gi|342803497|gb|EGU38848.1| histone deacetylase/AcuC/AphA family protein [Vibrio ichthyoenteri
ATCC 700023]
Length = 312
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 34/200 (17%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL----------SSEGFLDKNCIVEPLE 84
+PLIY P Y S L + H + +K+ + Q + S +L+ +P
Sbjct: 2 IPLIYHPIY--SQLTLPAKHRYPINKYQLLFQAVEQKLHATSIASPAKWLNTFQFFKPCP 59
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV------- 137
S E + H Y+ +L S ++P + R++ +P+ +Q+
Sbjct: 60 LSPETVSRHHCPDYIDALLSG-------QLPAAKM-------RRIGFPWSEQLIERTLTS 105
Query: 138 -GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
GGT L +LA + G AI++ GG+HH D G GFC D+++ A ++ RV+II
Sbjct: 106 AGGTWLTTQLALDYGVAIHLSGGYHHAHYDFGTGFCLINDLAMSAKQALSMDHVDRVLII 165
Query: 197 DLDAHQGNGHEKDFSSDSRV 216
D D H G+G + D R+
Sbjct: 166 DSDVHHGDGTATMCADDERI 185
>gi|70606055|ref|YP_254925.1| histone deacetylase [Sulfolobus acidocaldarius DSM 639]
gi|449066252|ref|YP_007433334.1| histone deacetylase [Sulfolobus acidocaldarius N8]
gi|449068528|ref|YP_007435609.1| histone deacetylase [Sulfolobus acidocaldarius Ron12/I]
gi|68566703|gb|AAY79632.1| histone deacetylase [Sulfolobus acidocaldarius DSM 639]
gi|449034760|gb|AGE70186.1| histone deacetylase [Sulfolobus acidocaldarius N8]
gi|449037036|gb|AGE72461.1| histone deacetylase [Sulfolobus acidocaldarius Ron12/I]
Length = 346
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 42 DYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
DYD HPF + + + L G +++P S+EDLL VHS Y++
Sbjct: 8 DYDYLKYSFPGNHPFKALRETMAKKILEERGAFHYMDVIKPDLISEEDLLKVHSRDYIQL 67
Query: 102 LQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFR-KQVGGTILAAKLAKERGWAINVGGG 159
++ S + ++ F K +Y + GT+ KL + N+GGG
Sbjct: 68 VKKKSEEGTGYLDDGDTPAF-------KGMYEGALSRTSGTVTTIKLLDKYDVVFNIGGG 120
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD--SRVY 217
FHH GFC + D++L I A Q +R+ +ID+D H G+G + D S
Sbjct: 121 FHHAKYSSASGFCVFNDVALAIKIA--QEKYNRIALIDIDGHHGDGTQYMLFDDPNSLKI 178
Query: 218 ILDMFNPGIYP 228
L M++ G +P
Sbjct: 179 SLHMYHRGFFP 189
>gi|241663209|ref|YP_002981569.1| histone deacetylase superfamily protein [Ralstonia pickettii 12D]
gi|240865236|gb|ACS62897.1| histone deacetylase superfamily [Ralstonia pickettii 12D]
Length = 335
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y+ ++ + + P QR++ +P+
Sbjct: 57 EAPRADDDALLLAHTTEYVCAVSAG-------RLDPAR-------QREIGFPWSPEMVER 102
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 103 SRRSAGATMAACDAALADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRQSGR 160
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L + YP EA
Sbjct: 161 TPGDFPVAIVDLDVHQGNGTASILRDDATVFTLSLHGEKNYPFRKEA 207
>gi|373252104|ref|ZP_09540222.1| histone deacetylase superfamily protein [Nesterenkonia sp. F]
Length = 400
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLD--KNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
HP D + G LD + ++ P A+ EDLL VHS Y+++++++
Sbjct: 29 HPMDPVRLELTVDLCREMGILDDPRVSVLAPGVAADEDLLTVHSADYIEAVRAAGAHGTP 88
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTI--LAAKLAKERGWAINVGGGFHHCSADEGG 169
E + N + + + V G++ + A L+ A+NV GG HH +
Sbjct: 89 SEAHGLGTEDNPVFD-AIHTASARIVQGSLDCVDAVLSGAAARAVNVAGGMHHAARSRAA 147
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GFC Y D + + + + RV+ +DLDAH G+G E F + RV + + G+
Sbjct: 148 GFCVYNDAAAAVRR-LLDRGVPRVLYLDLDAHHGDGTESIFVDEPRVMTISLHESGL 203
>gi|409397154|ref|ZP_11248092.1| histone deacetylase family protein [Pseudomonas sp. Chol1]
gi|409118314|gb|EKM94714.1| histone deacetylase family protein [Pseudomonas sp. Chol1]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L G + P+ + L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVDSGLTTDAALRRPMLCRHDVLNL 57
Query: 93 VHSESYLK---SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y+ S SP + +P + L QR V + VGG++L A+LA +
Sbjct: 58 AHDANYVARYCSGDMSPAELRRLGLP----WSPALAQRTV-----RAVGGSLLTAELALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHRDHASGFCIFNDLAVVALYLLESGRVGRVLIFDCDVHQGDGTAR 167
>gi|241563574|ref|XP_002401662.1| histone deacetylase complex, catalytic component HDA1, putative
[Ixodes scapularis]
gi|215499888|gb|EEC09382.1| histone deacetylase complex, catalytic component HDA1, putative
[Ixodes scapularis]
Length = 413
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 72 GFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN------VSIIIEVPPVALFPNCLV 125
G L I+ P +A++ DLL HSE Y+ L++ + I+ + L +C +
Sbjct: 79 GLLKSLYIIRPPQATRNDLLTFHSEDYVDFLETCESAKDLETTDILDKAIEYNLMDDCPL 138
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHY 183
++ + GGT+ AA+ E AI+ GG+HH E GFC D+ L I
Sbjct: 139 TDRIFTLVKHIAGGTLSAARALTEGQCDVAIHWEGGWHHAQRSEAAGFCYVNDVVLGI-- 196
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
++ RV+ +DLD H G+G + F +V + + P YP
Sbjct: 197 LQLRRRFERVLYVDLDVHHGDGVQDAFCGTDKVATVSFHQYEPCFYP 243
>gi|325266774|ref|ZP_08133447.1| histone deacetylase [Kingella denitrificans ATCC 33394]
gi|324981776|gb|EGC17415.1| histone deacetylase [Kingella denitrificans ATCC 33394]
Length = 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 4/191 (2%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSPD F G LHP + I Q L G +E + ++ L VH+
Sbjct: 57 LYSPDCQTHFAG--SLHPESPERTEAIEQALRRSGLWLLLQKIEAPDVTEVQLARVHTRR 114
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVG 157
YL L+S +++ +Q ++ K AK A+
Sbjct: 115 YLNDLESRLPAQGQVQINDDTFLSRHTLQAARKAAGAAVKAVDMVMRKQAKNAFCAVRPP 174
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH AD+ GFC ++++ + + + RV I+D D H G+G + F+ D RV
Sbjct: 175 G--HHAHADKASGFCFINNVAVAAMHLIAEYRLERVAILDFDVHHGDGTQDIFADDPRVM 232
Query: 218 ILDMFNPGIYP 228
+L F +YP
Sbjct: 233 LLSSFEYPLYP 243
>gi|326384465|ref|ZP_08206145.1| Histone deacetylase [Gordonia neofelifaecis NRRL B-59395]
gi|326196810|gb|EGD54004.1| Histone deacetylase [Gordonia neofelifaecis NRRL B-59395]
Length = 414
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + S LD VEPL L VH++ Y++++++ + S +
Sbjct: 20 HPMSPVRLALTMSLARSLQVLDDVETVEPLPVDDSVLRTVHTQGYIEAVRAVSSGSASMN 79
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG-------WAINVGGGFHHCSAD 166
P + ++ G ++ LA + A+N+GGG HH
Sbjct: 80 APVLERLFGLGSADNPIFEGMHDAGSMLVGGSLAAAQAITSGRVTRAVNIGGGMHHAMKG 139
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
GFC Y D S+ I + ++ R+ ID+DAH G+G + +F D RV + +
Sbjct: 140 HAAGFCIYNDCSIAIRW-LLENGYDRIAYIDVDAHHGDGVQTEFIGDPRVMTVSLHQ 195
>gi|341616230|ref|ZP_08703099.1| hypothetical protein CJLT1_14807 [Citromicrobium sp. JLT1363]
Length = 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P R GGT LAA+LA E G+A N G HH D G GFC + D+
Sbjct: 64 ERRIGFPVTPHIASRVRHTNGGTWLAAQLAMEHGYAANSAAGSHHALYDTGAGFCVFNDL 123
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++C + + RV+I+D D HQG+G
Sbjct: 124 AVCANRLIGEAQADRVLIVDCDVHQGDG 151
>gi|379796096|ref|YP_005326095.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873087|emb|CCE59426.1| Acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 389
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L LD IV+P A+ ++L++VH Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLLDANLLDPEQIVQPRIATDDELMLVHKYDYVEAIKHASHGIISDD 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTILAAKL--AKERGWAINVGGGFHHCSADEGG 169
E L Q K ++ VGG + A L + E ++GGG HH
Sbjct: 85 EAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGEVLNGCHLGGGLHHAQPGRAS 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y DI++ Y + RV+++D DAH G+G + F +D+ + + G
Sbjct: 145 GFCIYNDIAVTAKYLATKYQ-QRVLVVDTDAHHGDGTQWSFYADNHIATYSIHETG 199
>gi|441518656|ref|ZP_21000371.1| putative acetoin utilization protein [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454470|dbj|GAC58332.1| putative acetoin utilization protein [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 414
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 8/175 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + S G LD + PL + L VH++ Y+ ++++ + +
Sbjct: 20 HPMSPVRLALTMDLARSLGVLDDVETIPPLPVGDDILRTVHTQGYIDAVRAVGSGMASLS 79
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVG----GTILAAKLAKERGW---AINVGGGFHHCSAD 166
P + + ++ G G LAA A G A+N+GGG HH A
Sbjct: 80 GPMLERLFGLGSEDNPVFDRMHDAGAMLVGGTLAAAQAVHSGQVQRAVNIGGGMHHAMAG 139
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I + Q R+ +D+DAH G+G + F D RV + +
Sbjct: 140 HAAGFCIYNDAAVAIEWLLAQ-GYDRIAYVDIDAHHGDGVQVQFEHDPRVMTISL 193
>gi|407939445|ref|YP_006855086.1| histone deacetylase [Acidovorax sp. KKS102]
gi|407897239|gb|AFU46448.1| histone deacetylase [Acidovorax sp. KKS102]
Length = 310
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+ E L AS E L VHS Y+ ++ + P A QR++ +P+
Sbjct: 40 LKEALPASDEALARVHSPQYINAVDHG-------TLAPAA-------QREIGFPWSPAMA 85
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV-QLN 189
R+ VG T+ A + A G A N+ GG HH AD+G GFC + D+++ A LN
Sbjct: 86 ERARRSVGATLAATRAAWREGVAGNLAGGTHHSYADKGSGFCVFNDVAVAARQAQADHLN 145
Query: 190 IS-----RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+V +IDLD HQGNG F D V+ L + +P
Sbjct: 146 DGSGWPLQVAVIDLDVHQGNGTAHIFQGDDSVFTLSLHGARNFP 189
>gi|121591754|ref|ZP_01678964.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
2740-80]
gi|121546385|gb|EAX56637.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
2740-80]
Length = 171
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEGTL--------------SAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|397169769|ref|ZP_10493199.1| histone deacetylase superfamily protein [Alishewanella aestuarii
B11]
gi|396088664|gb|EJI86244.1| histone deacetylase superfamily protein [Alishewanella aestuarii
B11]
Length = 312
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 16/184 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PLIY P Y S L + H + K+ + Q L + G D + P + L ++H
Sbjct: 7 PLIYHPCY--SELTLPANHRYPIGKYRTLYQRLLALGVPD-SAFYLPQAIKAQALELLHE 63
Query: 96 ESYLKSL-QSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+ +L Q + + + + FP L+ R + +GGT+L A+LA E+G
Sbjct: 64 PAYVNALCQGTLDARAMRRIG----FPWSPELITRSL-----TSLGGTLLCAELALEQGL 114
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+++ GG+HH EG GFC + D++ + Q I ++I D D HQG+G F+
Sbjct: 115 ALHLSGGYHHAFYAEGSGFCLFNDLAFAA-LSIQQRGIGPILIFDCDVHQGDGSAALFAD 173
Query: 213 DSRV 216
+S +
Sbjct: 174 NSGI 177
>gi|333919422|ref|YP_004493003.1| putative acetoin utilization protein [Amycolicicoccus subflavus
DQS3-9A1]
gi|333481643|gb|AEF40203.1| Putative acetoin utilization protein [Amycolicicoccus subflavus
DQS3-9A1]
Length = 418
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 36 PLIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
P+ YS + FL + + HP + + S G L ++ I+ P +S+++LL V
Sbjct: 7 PVPYSVIWTPEFLSYRLSESHPMNPLRLELTIDLAESLGILAESEIIRPDRSSEQELLRV 66
Query: 94 HSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG----GTILAAKLA 147
H+ +YL ++Q S+P+ E + L ++P G G LAA
Sbjct: 67 HTPAYLAAVQKVSAPDSGTHRENRLIGLAHGLGNDDNPVFPAMHDAGMIVAGGTLAAAHQ 126
Query: 148 KERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G A +++ GG HH + GFC Y D ++ I + + +R+ ID+D H G+
Sbjct: 127 IHSGLARRVVSIAGGMHHAMPNYAAGFCIYNDCAIAISW-LLDHGYTRIAYIDVDVHHGD 185
Query: 205 GHEKDFSSDSRVYILDMFN 223
G + F D RV + +
Sbjct: 186 GVQHAFYDDPRVMTISLHQ 204
>gi|388547860|ref|ZP_10151119.1| putative histone deacetylase family protein [Pseudomonas sp. M47T1]
gi|388274018|gb|EIK93621.1| putative histone deacetylase family protein [Pseudomonas sp. M47T1]
Length = 305
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPQF---PPEHRFPMDKFRLLRDHLVDSGLTRDADLLRPAVCPADTLALAH 59
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG++LAA+ A + G
Sbjct: 60 DRDYIERFMSGQLGREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + V+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAIISRYLLASGRVGSVLIFDCDVHQGDG 164
>gi|304320465|ref|YP_003854108.1| histone deacetylase/AcuC/AphA family protein [Parvularcula
bermudensis HTCC2503]
gi|303299367|gb|ADM08966.1| putative histone deacetylase/AcuC/AphA family protein [Parvularcula
bermudensis HTCC2503]
Length = 299
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
YS D+ I+ + H F + K+ + L E L + A + ++ V H+ESY
Sbjct: 5 YSSDFTIA---LPAGHRFPAIKYQLLKTALIEERLLPAERLAPSPAAREGEIKVAHTESY 61
Query: 99 LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKER 150
+ SL+ + P A+ R++ +P+ ++ VGG + AA+ A +
Sbjct: 62 IASLREG-------TIDPRAM-------RRIGFPWSPHIHRRGQRTVGGALAAARRALKE 107
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G + + GG HH A+ G G+C Y D ++ + + R+ I+DLD HQG+G+
Sbjct: 108 GLSGQLAGGTHHAHAEAGSGYCIYNDFAVVARTLLNEGVVDRIAIVDLDVHQGDGNAAML 167
Query: 211 SSDSRVYILDMFNPGIYP 228
+ VYILD+F +P
Sbjct: 168 TDHPGVYILDVFGEKNFP 185
>gi|260575873|ref|ZP_05843869.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
gi|259022026|gb|EEW25326.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
Length = 369
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKN-CIVEPLEASKEDLLVVHSESYLKSL----- 102
G HP + G + ++ G+ + ++E A + L H+ +YL+++
Sbjct: 15 GYRGNHPLAIPRIGTVEALCAALGWTGPDHPVLESPVADRAFLERFHTPAYLEAMLRAEA 74
Query: 103 --QSSPNVSI-----IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
++SP +E P +FP L QR VGG++LAA LA A +
Sbjct: 75 AGRASPEDQARHNLGTLENP---VFPG-LWQRAA-----TSVGGSVLAADLAHAGAVAYH 125
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
GG HH D GFC + D I + L +RV+ +DLDAH G+G E F++D R
Sbjct: 126 PAGGTHHGMPDRANGFCFFNDPVFAI-LRLLDLGRARVVYVDLDAHHGDGVEAAFAADPR 184
Query: 216 VYILDMFNPGIYP 228
V + M G +P
Sbjct: 185 VRTISMHQAGRWP 197
>gi|239918281|ref|YP_002957839.1| deacetylase, histone deacetylase/acetoin utilization protein
[Micrococcus luteus NCTC 2665]
gi|281415525|ref|ZP_06247267.1| deacetylase, histone deacetylase/acetoin utilization protein
[Micrococcus luteus NCTC 2665]
gi|239839488|gb|ACS31285.1| deacetylase, histone deacetylase/acetoin utilization protein
[Micrococcus luteus NCTC 2665]
Length = 417
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
HP + + + + G LD IVEP A+ E L +VH Y+ +++ + S
Sbjct: 30 HPMAPLRLDLTHRLVEAFGLLDAPHVRIVEPPVATDEQLALVHDPEYVAAVRRAAETSSA 89
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGG 169
+ +C V + + GG+++AA+ + E A+N GG HH +
Sbjct: 90 EDGRFGLGTEDCPVFPDLHESAARIAGGSLVAAEAIWSGEVDRAVNFAGGMHHAARSSAS 149
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GFC Y D ++ I + L RV +D+DAH G+G + F D RV + + GI
Sbjct: 150 GFCIYNDCAVAIQR-LLDLGAERVAYVDVDAHHGDGTQSIFYDDPRVLTISLHETGI 205
>gi|395862306|ref|XP_003803399.1| PREDICTED: histone deacetylase 8 isoform 1 [Otolemur garnettii]
Length = 377
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+PL AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 56 IVKPLVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 114
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D L I ++ R+
Sbjct: 115 VGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRI 172
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
+ +DLD H G+G E FS S+V + + F+PG +P
Sbjct: 173 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFP 209
>gi|350267146|ref|YP_004878453.1| acetoin utilization protein AcuC [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349600033|gb|AEP87821.1| acetoin utilization protein AcuC [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 397
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP Y E HPF+ + L D I+ P A +E+L +VH++
Sbjct: 15 FIYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKMINAFDDGDIISPRLAEEEELALVHTD 72
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
Y+++ L + S + +F +L VGGT+ AA +
Sbjct: 73 DYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVM 126
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N+GGG HH GFC Y D ++ I Y + +RV+ ID DAH G+G
Sbjct: 127 SGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYR-ARVLYIDTDAHHGDGV 185
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
+ F + V L + G Y
Sbjct: 186 QFTFYDNPDVCTLSIHETGRY 206
>gi|389817810|ref|ZP_10208368.1| acetoin utilization protein [Planococcus antarcticus DSM 14505]
gi|388464283|gb|EIM06615.1| acetoin utilization protein [Planococcus antarcticus DSM 14505]
Length = 392
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
+ HPF+ + L L + +V A+ E+LL+ H E Y+ ++ + +
Sbjct: 28 ETHPFNQKRLVLTIDLLKKMNALPSDLVVPARIATDEELLLAHDERYIDIVKKASRGEVT 87
Query: 112 IE--------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFH 161
E +F N K VGGT+ A E A+N+GGG H
Sbjct: 88 PEAGESYGIGTEDTPIFENMHEASA------KLVGGTLTAVDYVMEGKAQHALNLGGGLH 141
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D S+ I+Y + N +RV+ ID DAH G+G + F D V + +
Sbjct: 142 HGFRGKASGFCIYNDSSVAINYLKSKYN-ARVLYIDTDAHHGDGVQWSFYDDPDVCTVSI 200
Query: 222 FNPGIY 227
G Y
Sbjct: 201 HETGRY 206
>gi|15642044|ref|NP_231676.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|153820272|ref|ZP_01972939.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae NCTC
8457]
gi|153824175|ref|ZP_01976842.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|227082169|ref|YP_002810720.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
M66-2]
gi|229507869|ref|ZP_04397374.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae BX
330286]
gi|229511896|ref|ZP_04401375.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|229519032|ref|ZP_04408475.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC9]
gi|229607414|ref|YP_002878062.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MJ-1236]
gi|254849129|ref|ZP_05238479.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MO10]
gi|255745211|ref|ZP_05419160.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholera CIRS
101]
gi|262155929|ref|ZP_06029050.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae INDRE
91/1]
gi|298497930|ref|ZP_07007737.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MAK
757]
gi|360035924|ref|YP_004937687.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741866|ref|YP_005333835.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
IEC224]
gi|417814079|ref|ZP_12460732.1| histone deacetylase domain protein [Vibrio cholerae HC-49A2]
gi|417817817|ref|ZP_12464446.1| histone deacetylase domain protein [Vibrio cholerae HCUF01]
gi|418335058|ref|ZP_12943971.1| histone deacetylase domain protein [Vibrio cholerae HC-06A1]
gi|418338671|ref|ZP_12947565.1| histone deacetylase domain protein [Vibrio cholerae HC-23A1]
gi|418346594|ref|ZP_12951354.1| histone deacetylase domain protein [Vibrio cholerae HC-28A1]
gi|418350352|ref|ZP_12955083.1| histone deacetylase domain protein [Vibrio cholerae HC-43A1]
gi|418355888|ref|ZP_12958607.1| histone deacetylase domain protein [Vibrio cholerae HC-61A1]
gi|419827012|ref|ZP_14350511.1| histone deacetylase domain protein [Vibrio cholerae CP1033(6)]
gi|421318129|ref|ZP_15768697.1| histone deacetylase domain protein [Vibrio cholerae CP1032(5)]
gi|421321807|ref|ZP_15772360.1| histone deacetylase domain protein [Vibrio cholerae CP1038(11)]
gi|421325608|ref|ZP_15776132.1| histone deacetylase domain protein [Vibrio cholerae CP1041(14)]
gi|421333176|ref|ZP_15783653.1| histone deacetylase domain protein [Vibrio cholerae CP1046(19)]
gi|421336765|ref|ZP_15787226.1| histone deacetylase domain protein [Vibrio cholerae CP1048(21)]
gi|421340193|ref|ZP_15790625.1| histone deacetylase domain protein [Vibrio cholerae HC-20A2]
gi|421348484|ref|ZP_15798861.1| histone deacetylase domain protein [Vibrio cholerae HC-46A1]
gi|422897146|ref|ZP_16934594.1| histone deacetylase domain protein [Vibrio cholerae HC-40A1]
gi|422903345|ref|ZP_16938319.1| histone deacetylase domain protein [Vibrio cholerae HC-48A1]
gi|422907228|ref|ZP_16942031.1| histone deacetylase domain protein [Vibrio cholerae HC-70A1]
gi|422914075|ref|ZP_16948581.1| histone deacetylase domain protein [Vibrio cholerae HFU-02]
gi|422926281|ref|ZP_16959295.1| histone deacetylase domain protein [Vibrio cholerae HC-38A1]
gi|423145602|ref|ZP_17133196.1| histone deacetylase domain protein [Vibrio cholerae HC-19A1]
gi|423150278|ref|ZP_17137592.1| histone deacetylase domain protein [Vibrio cholerae HC-21A1]
gi|423154096|ref|ZP_17141277.1| histone deacetylase domain protein [Vibrio cholerae HC-22A1]
gi|423157181|ref|ZP_17144274.1| histone deacetylase domain protein [Vibrio cholerae HC-32A1]
gi|423160750|ref|ZP_17147690.1| histone deacetylase domain protein [Vibrio cholerae HC-33A2]
gi|423165576|ref|ZP_17152302.1| histone deacetylase domain protein [Vibrio cholerae HC-48B2]
gi|423768874|ref|ZP_17713020.1| histone deacetylase domain protein [Vibrio cholerae HC-50A2]
gi|423895478|ref|ZP_17727225.1| histone deacetylase domain protein [Vibrio cholerae HC-62A1]
gi|423930915|ref|ZP_17731618.1| histone deacetylase domain protein [Vibrio cholerae HC-77A1]
gi|424003030|ref|ZP_17746105.1| histone deacetylase domain protein [Vibrio cholerae HC-17A2]
gi|424006819|ref|ZP_17749789.1| histone deacetylase domain protein [Vibrio cholerae HC-37A1]
gi|424024802|ref|ZP_17764453.1| histone deacetylase domain protein [Vibrio cholerae HC-62B1]
gi|424027687|ref|ZP_17767290.1| histone deacetylase domain protein [Vibrio cholerae HC-69A1]
gi|424586963|ref|ZP_18026542.1| histone deacetylase domain protein [Vibrio cholerae CP1030(3)]
gi|424591759|ref|ZP_18031184.1| histone deacetylase domain protein [Vibrio cholerae CP1037(10)]
gi|424595611|ref|ZP_18034932.1| histone deacetylase domain protein [Vibrio cholerae CP1040(13)]
gi|424599529|ref|ZP_18038708.1| histone deacetylase domain protein [Vibrio Cholerae CP1044(17)]
gi|424602249|ref|ZP_18041390.1| histone deacetylase domain protein [Vibrio cholerae CP1047(20)]
gi|424607222|ref|ZP_18046164.1| histone deacetylase domain protein [Vibrio cholerae CP1050(23)]
gi|424611043|ref|ZP_18049882.1| histone deacetylase domain protein [Vibrio cholerae HC-39A1]
gi|424613854|ref|ZP_18052642.1| histone deacetylase domain protein [Vibrio cholerae HC-41A1]
gi|424617831|ref|ZP_18056503.1| histone deacetylase domain protein [Vibrio cholerae HC-42A1]
gi|424622615|ref|ZP_18061120.1| histone deacetylase domain protein [Vibrio cholerae HC-47A1]
gi|424645578|ref|ZP_18083314.1| histone deacetylase domain protein [Vibrio cholerae HC-56A2]
gi|424653344|ref|ZP_18090724.1| histone deacetylase domain protein [Vibrio cholerae HC-57A2]
gi|424657167|ref|ZP_18094452.1| histone deacetylase domain protein [Vibrio cholerae HC-81A2]
gi|440710238|ref|ZP_20890889.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
4260B]
gi|443504398|ref|ZP_21071356.1| histone deacetylase domain protein [Vibrio cholerae HC-64A1]
gi|443508297|ref|ZP_21075060.1| histone deacetylase domain protein [Vibrio cholerae HC-65A1]
gi|443512139|ref|ZP_21078777.1| histone deacetylase domain protein [Vibrio cholerae HC-67A1]
gi|443515696|ref|ZP_21082207.1| histone deacetylase domain protein [Vibrio cholerae HC-68A1]
gi|443519489|ref|ZP_21085885.1| histone deacetylase domain protein [Vibrio cholerae HC-71A1]
gi|443524380|ref|ZP_21090593.1| histone deacetylase domain protein [Vibrio cholerae HC-72A2]
gi|443531976|ref|ZP_21097990.1| histone deacetylase domain protein [Vibrio cholerae HC-7A1]
gi|443535776|ref|ZP_21101653.1| histone deacetylase domain protein [Vibrio cholerae HC-80A1]
gi|443539319|ref|ZP_21105173.1| histone deacetylase domain protein [Vibrio cholerae HC-81A1]
gi|449055536|ref|ZP_21734204.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. Inaba G4222]
gi|9656588|gb|AAF95190.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|126509182|gb|EAZ71776.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae NCTC
8457]
gi|126518301|gb|EAZ75526.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|227010057|gb|ACP06269.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
M66-2]
gi|229343721|gb|EEO08696.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC9]
gi|229351861|gb|EEO16802.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|229355374|gb|EEO20295.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae BX
330286]
gi|229370069|gb|ACQ60492.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MJ-1236]
gi|254844834|gb|EET23248.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MO10]
gi|255737041|gb|EET92437.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholera CIRS
101]
gi|262030240|gb|EEY48883.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae INDRE
91/1]
gi|297542263|gb|EFH78313.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MAK
757]
gi|340036565|gb|EGQ97541.1| histone deacetylase domain protein [Vibrio cholerae HC-49A2]
gi|340037540|gb|EGQ98515.1| histone deacetylase domain protein [Vibrio cholerae HCUF01]
gi|341620789|gb|EGS46543.1| histone deacetylase domain protein [Vibrio cholerae HC-48A1]
gi|341620988|gb|EGS46740.1| histone deacetylase domain protein [Vibrio cholerae HC-70A1]
gi|341621824|gb|EGS47555.1| histone deacetylase domain protein [Vibrio cholerae HC-40A1]
gi|341637299|gb|EGS61987.1| histone deacetylase domain protein [Vibrio cholerae HFU-02]
gi|341646063|gb|EGS70181.1| histone deacetylase domain protein [Vibrio cholerae HC-38A1]
gi|356417082|gb|EHH70701.1| histone deacetylase domain protein [Vibrio cholerae HC-06A1]
gi|356418270|gb|EHH71873.1| histone deacetylase domain protein [Vibrio cholerae HC-21A1]
gi|356422816|gb|EHH76285.1| histone deacetylase domain protein [Vibrio cholerae HC-19A1]
gi|356428656|gb|EHH81882.1| histone deacetylase domain protein [Vibrio cholerae HC-22A1]
gi|356430313|gb|EHH83522.1| histone deacetylase domain protein [Vibrio cholerae HC-23A1]
gi|356432899|gb|EHH86094.1| histone deacetylase domain protein [Vibrio cholerae HC-28A1]
gi|356439455|gb|EHH92424.1| histone deacetylase domain protein [Vibrio cholerae HC-32A1]
gi|356444848|gb|EHH97657.1| histone deacetylase domain protein [Vibrio cholerae HC-43A1]
gi|356445491|gb|EHH98295.1| histone deacetylase domain protein [Vibrio cholerae HC-33A2]
gi|356450597|gb|EHI03314.1| histone deacetylase domain protein [Vibrio cholerae HC-48B2]
gi|356452386|gb|EHI05065.1| histone deacetylase domain protein [Vibrio cholerae HC-61A1]
gi|356647078|gb|AET27133.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795376|gb|AFC58847.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
IEC224]
gi|395916387|gb|EJH27217.1| histone deacetylase domain protein [Vibrio cholerae CP1032(5)]
gi|395917446|gb|EJH28274.1| histone deacetylase domain protein [Vibrio cholerae CP1041(14)]
gi|395918801|gb|EJH29625.1| histone deacetylase domain protein [Vibrio cholerae CP1038(11)]
gi|395928578|gb|EJH39331.1| histone deacetylase domain protein [Vibrio cholerae CP1046(19)]
gi|395931864|gb|EJH42608.1| histone deacetylase domain protein [Vibrio cholerae CP1048(21)]
gi|395939476|gb|EJH50158.1| histone deacetylase domain protein [Vibrio cholerae HC-20A2]
gi|395943063|gb|EJH53739.1| histone deacetylase domain protein [Vibrio cholerae HC-46A1]
gi|395958647|gb|EJH69126.1| histone deacetylase domain protein [Vibrio cholerae HC-56A2]
gi|395959239|gb|EJH69682.1| histone deacetylase domain protein [Vibrio cholerae HC-57A2]
gi|395961942|gb|EJH72251.1| histone deacetylase domain protein [Vibrio cholerae HC-42A1]
gi|395970729|gb|EJH80469.1| histone deacetylase domain protein [Vibrio cholerae HC-47A1]
gi|395972960|gb|EJH82534.1| histone deacetylase domain protein [Vibrio cholerae CP1030(3)]
gi|395975395|gb|EJH84886.1| histone deacetylase domain protein [Vibrio cholerae CP1047(20)]
gi|408007037|gb|EKG45148.1| histone deacetylase domain protein [Vibrio cholerae HC-39A1]
gi|408012616|gb|EKG50391.1| histone deacetylase domain protein [Vibrio cholerae HC-41A1]
gi|408030652|gb|EKG67306.1| histone deacetylase domain protein [Vibrio cholerae CP1037(10)]
gi|408031991|gb|EKG68591.1| histone deacetylase domain protein [Vibrio cholerae CP1040(13)]
gi|408041546|gb|EKG77652.1| histone deacetylase domain protein [Vibrio Cholerae CP1044(17)]
gi|408042813|gb|EKG78846.1| histone deacetylase domain protein [Vibrio cholerae CP1050(23)]
gi|408053174|gb|EKG88194.1| histone deacetylase domain protein [Vibrio cholerae HC-81A2]
gi|408607802|gb|EKK81205.1| histone deacetylase domain protein [Vibrio cholerae CP1033(6)]
gi|408633618|gb|EKL05943.1| histone deacetylase domain protein [Vibrio cholerae HC-50A2]
gi|408654347|gb|EKL25489.1| histone deacetylase domain protein [Vibrio cholerae HC-77A1]
gi|408655278|gb|EKL26403.1| histone deacetylase domain protein [Vibrio cholerae HC-62A1]
gi|408845427|gb|EKL85543.1| histone deacetylase domain protein [Vibrio cholerae HC-37A1]
gi|408845564|gb|EKL85679.1| histone deacetylase domain protein [Vibrio cholerae HC-17A2]
gi|408870259|gb|EKM09539.1| histone deacetylase domain protein [Vibrio cholerae HC-62B1]
gi|408878990|gb|EKM17983.1| histone deacetylase domain protein [Vibrio cholerae HC-69A1]
gi|439974461|gb|ELP50638.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
4260B]
gi|443431343|gb|ELS73895.1| histone deacetylase domain protein [Vibrio cholerae HC-64A1]
gi|443435239|gb|ELS81383.1| histone deacetylase domain protein [Vibrio cholerae HC-65A1]
gi|443439122|gb|ELS88837.1| histone deacetylase domain protein [Vibrio cholerae HC-67A1]
gi|443443106|gb|ELS96408.1| histone deacetylase domain protein [Vibrio cholerae HC-68A1]
gi|443446907|gb|ELT03563.1| histone deacetylase domain protein [Vibrio cholerae HC-71A1]
gi|443449714|gb|ELT10005.1| histone deacetylase domain protein [Vibrio cholerae HC-72A2]
gi|443457366|gb|ELT24763.1| histone deacetylase domain protein [Vibrio cholerae HC-7A1]
gi|443461052|gb|ELT32126.1| histone deacetylase domain protein [Vibrio cholerae HC-80A1]
gi|443465419|gb|ELT40079.1| histone deacetylase domain protein [Vibrio cholerae HC-81A1]
gi|448264575|gb|EMB01812.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. Inaba G4222]
Length = 306
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEGT--------------LSAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|429962861|gb|ELA42405.1| hypothetical protein VICG_00504 [Vittaforma corneae ATCC 50505]
Length = 417
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y D +I K HP + + + G I PL AS ++L+ HSE
Sbjct: 5 VLYLYDPEIGCYHYAKGHPMKPLRVQMTHSLIVNYGLHKYMDIKRPLHASYDNLINFHSE 64
Query: 97 SYLKSLQSSPNVSIIIEVPPVALF---PNCLVQRKVLYPFRKQVGGTILAA-KL-AKERG 151
Y+ L + N ++ V + F +C V + + GGT++AA KL + E
Sbjct: 65 DYINFLSTVSNENMNQLVKDLHKFNIKEDCPVFTGLFDYCKLTAGGTMMAAHKLNSGEYD 124
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDF 210
AIN GG HH E GFC DI L I L + RV+ ID+D H G+G E+ F
Sbjct: 125 IAINWAGGLHHAKRSEASGFCYVNDIVLGI---LELLKVYERVLYIDIDIHHGDGVEEAF 181
Query: 211 SSDSRVYILDMFNPGIY 227
+ RV L G Y
Sbjct: 182 YTTDRVMTLSFHKYGDY 198
>gi|383830917|ref|ZP_09986006.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saccharomonospora xinjiangensis XJ-54]
gi|383463570|gb|EID55660.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saccharomonospora xinjiangensis XJ-54]
Length = 393
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP----NVS 109
HPF+ + + ++ G L+ + P A E L H+ Y+++++ +P +V
Sbjct: 21 HPFNPVRLDLTIRLATALGVLEDVPFLVPEPAVAEQLYRAHTAEYVEAVRQAPMAGWDVG 80
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGW-AINVGGGFHHCSADE 167
+ P +F + ++ VG T+L A+ +A+ R A+N+ GG HH D
Sbjct: 81 HGLGTPDNPVFTDMHEASALV------VGSTLLGARRIAEGRALRAVNIAGGLHHAMGDR 134
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D + I + + R+ +D D H G+G + F SD RV + +
Sbjct: 135 ASGFCVYNDCVVAISW-LLDHGFDRIAYVDTDVHHGDGVQAAFYSDPRVLTISL 187
>gi|147674598|ref|YP_001217568.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|227118489|ref|YP_002820385.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|262167664|ref|ZP_06035367.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC27]
gi|146316481|gb|ABQ21020.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|227013939|gb|ACP10149.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|262023869|gb|EEY42567.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC27]
Length = 306
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEGT--------------LSAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|308273423|emb|CBX30025.1| hypothetical protein N47_D28340 [uncultured Desulfobacterium sp.]
Length = 360
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + I L + K ++P EA++E+L +H+ Y+ + S+ S ++
Sbjct: 30 HPESPHRLETIYSMLEEKDMAGKFVAIKPREATREELGYIHTAEYISRVASTKTRSKVML 89
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTI-LAAKLAKERGWAINVGGGF-----HHCSADE 167
P P + +L GG + L L +++ I+ G F HH AD
Sbjct: 90 DPDTYTSPGSW-EAAIL-----AAGGVLELIDNLMEKK---IDNGFAFLRPPGHHAEADR 140
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC + +I++ YA + N+ R++IID D H GNG ++ F +D +V Y
Sbjct: 141 AMGFCLFNNIAIGAKYAIEKYNLDRILIIDWDIHHGNGTQRSFYNDPQVLYFSTHQYPYY 200
Query: 228 P 228
P
Sbjct: 201 P 201
>gi|119584564|gb|EAW64160.1| histone deacetylase 11, isoform CRA_d [Homo sapiens]
Length = 219
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS 105
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ +
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKGN 58
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
L+ +GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+
Sbjct: 52 LNELKGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVEL 97
>gi|669045|emb|CAA78369.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 278
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNC 123
L +G + + +P + L +VH Y+ + +P I +P +
Sbjct: 10 LLLEDGVIQPEQVYQPQLPDRAWLELVHEPDYVTAYCQGTLTPKAQRRIGLP----WSAG 65
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
+VQR + VGGTIL A+LA E G A N GG HH G GFC D+++
Sbjct: 66 VVQRTL-----TAVGGTILTAQLALEHGLACNTAGGTHHAFPGYGSGFCILNDLAIATRT 120
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
+ R++I+DLD HQG+G F D V+ M
Sbjct: 121 IQQRGLAQRILIVDLDVHQGDGTAFIFQDDPTVFTFSM 158
>gi|383643074|ref|ZP_09955480.1| histone deacetylase superfamily protein [Sphingomonas elodea ATCC
31461]
Length = 313
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 35/183 (19%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSS----KWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
+P+++ PDY P S+ K G + L +EG + P + L
Sbjct: 2 IPVVHHPDYVAPA-------PAGSAYLWNKNGLVRDLLQAEGA--RVTWHAPEAMPRRWL 52
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
VH Y+ + + EVPP R++ +P V GGT L
Sbjct: 53 EAVHDPDYVGEV-------LAAEVPPHK-------TRRIGFPVTPAVARRSERVPGGTFL 98
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
AA+LA+ G+A N GG HH AD G G+C + D+++ + + +RV+I+D D HQ
Sbjct: 99 AARLAQREGFAANSAGGSHHALADTGAGYCVFNDLAIAAVRLVEEGHAARVLIVDCDVHQ 158
Query: 203 GNG 205
G+G
Sbjct: 159 GDG 161
>gi|262170966|ref|ZP_06038644.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus
MB-451]
gi|261892042|gb|EEY38028.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus
MB-451]
Length = 306
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + D P A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEDIVRQQAQSEEWRDAFGFFTPQIAELSLVE 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
+H Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SLHDSEYVQALLDGT-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 RALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
>gi|15615799|ref|NP_244103.1| acetoin dehydrogenase [Bacillus halodurans C-125]
gi|10175860|dbj|BAB06956.1| acetoin dehydrogenase [Bacillus halodurans C-125]
Length = 389
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII-- 111
HPF+ + L S LD + IV P A++ +L ++H ++++ +++++ N ++
Sbjct: 21 HPFNHQRLRLTYDLLKSMDALDDSEIVAPRVATEAELRLIHDQAFIDAVKAAGNGTLSDG 80
Query: 112 ------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFHHC 163
+ +F N +L VGGT+ A E A ++GGG HH
Sbjct: 81 VALNYGLGTEDTPIFKNMHEAAALL------VGGTLTAVDQVMEGHAEHACHLGGGLHHG 134
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + +RV+ ID DAH G+G + F + V L +
Sbjct: 135 FRGKASGFCVYNDSSIAIEYMRRKFG-ARVLYIDTDAHHGDGVQWAFYEEDDVCTLSIHE 193
Query: 224 PGIY 227
G Y
Sbjct: 194 TGRY 197
>gi|218295240|ref|ZP_03496076.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
gi|218244443|gb|EED10968.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY +Y + G + HPF + + L + G + + P EA++E++L VHSE
Sbjct: 2 VIYRDEYRLYNFGPQ--HPFSPVRLEMLVSLLQALGVWREP--LSPSEATREEILSVHSE 57
Query: 97 SYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--LA 147
+K +++ + ++ L FP +VL VGGT+ A+ L
Sbjct: 58 RLVKRVEAVSRGERVPDLEHYGLGTGDTPVFPGMDRAARVL------VGGTLEGARRILL 111
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
ER + +GGG HH D GFC Y D+S+ I Y + + +V +D+D H G+G +
Sbjct: 112 GERR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRY-LTRAGL-KVAYLDIDVHHGDGVQ 168
Query: 208 KDFSSDSRVYILDMFNPGIY 227
+ V L + G Y
Sbjct: 169 WIHYEEKEVLTLSLHESGRY 188
>gi|27366395|ref|NP_761923.1| Histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
CMCP6]
gi|27362596|gb|AAO11450.1| Histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
CMCP6]
Length = 312
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SQLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +++
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEKLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHGSVDKVLIIDS 164
Query: 199 DAHQGNG 205
D H G+G
Sbjct: 165 DVHHGDG 171
>gi|334347059|ref|XP_003341883.1| PREDICTED: histone deacetylase 8-like [Monodelphis domestica]
Length = 379
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L + +V+P AS E++ H+++
Sbjct: 21 IYSPEYVRTCDSLAKV----PKRASMVHSLIEAYELLKEMRVVKPKVASMEEMASFHTDA 76
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWA 153
YL+ LQ S + L +C + GGTI AA+ + A
Sbjct: 77 YLQHLQKVSEEGDDEHPDSVEFGLGYDCPSTEGIFDYAAAVGGGTITAAQCLIDGTCNIA 136
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN GG+HH DE GFC D L I + ++ R++ +DLD H G+G E FS
Sbjct: 137 INWAGGWHHAKKDEASGFCYLNDAVLGILH--LRRKFDRILYVDLDLHHGDGVEDAFSFT 194
Query: 214 SRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 195 SKVMTVSLHKFSPGFFP 211
>gi|429211647|ref|ZP_19202812.1| histone deacetylase superfamily protein [Pseudomonas sp. M1]
gi|428156129|gb|EKX02677.1| histone deacetylase superfamily protein [Pseudomonas sp. M1]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + + L G ++ P + L + H
Sbjct: 3 LPLVYHDDYSPPF---PAGHRFPMEKFRLLKEHLVDSGLTSDAALLRPEPCPADILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y++ S E+ + L + L +R V + VGG++L A+LA G A
Sbjct: 60 DRGYIERYCSGDMSRE--ELRRLGLPWSEALARRTV-----RAVGGSLLGAELALRHGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ + RV+I D D HQG+G
Sbjct: 113 CHLAGGTHHAHHDHASGFCIFNDLAVIALHLLASGRAGRVLIFDCDVHQGDG 164
>gi|410645160|ref|ZP_11355628.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
gi|410135393|dbj|GAC04027.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
Length = 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS-PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
+ +A+KE L + H ++Y+ S+ +S P I+ P L P L LY G
Sbjct: 43 QATQATKEQLYLAHDKAYVDSVFASVPEQGIVELAPDTQLGPRSL--EAALY----AAGA 96
Query: 140 TILAAKL-----AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
++A L A++ A+ G HH + GFC + +I++ HYA Q + R+
Sbjct: 97 NVMAVDLVMQGKAQQAFCAVRPPG--HHAEYAKAMGFCFFNNIAVAAHYAMAQYGLERIA 154
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
+ID D H GNG E F D RV F +P
Sbjct: 155 VIDFDVHHGNGTENIFFDDERVLFCSSFESPFFP 188
>gi|392956986|ref|ZP_10322511.1| Histone deacetylase [Bacillus macauensis ZFHKF-1]
gi|391876888|gb|EIT85483.1| Histone deacetylase [Bacillus macauensis ZFHKF-1]
Length = 386
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + LS+ G L I+ P A+ +++ ++H SY+++++ +
Sbjct: 21 HPFNQLRVKLTYDLLSASGLLSNEQIIAPRIATDQEIALIHDVSYIEAVKKAGAGTLNEA 80
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFH 161
N + E P+ FP ++ G T+ A L E +A N GG H
Sbjct: 81 VAANHGLGTEDTPI--FPRMHEASALI------TGATLTACDLVMEGKATYAFNPSGGLH 132
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + +V+ +D DAH G+G + F D RV L +
Sbjct: 133 HGFRGKASGFCIYNDSAVAIEYLKRNYGV-KVLYVDTDAHHGDGVQWAFYEDERVCTLSL 191
Query: 222 FNPGIY 227
G Y
Sbjct: 192 HETGRY 197
>gi|399544425|ref|YP_006557733.1| deacetylase [Marinobacter sp. BSs20148]
gi|399159757|gb|AFP30320.1| Deacetylase [Marinobacter sp. BSs20148]
Length = 308
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 9/194 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS-SPNVSIII 112
HP + I +L+ V P E +++ LL VH ESYLK L P +
Sbjct: 20 HPERPERIAAIQSYLADTALAQDLDYVRPDEITRDQLLTVHPESYLKQLDMMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L ++ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMTPDTLRAARLAAGANIQAVDMVMSSQVTNAFVCARPPG---HHAERSKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +++L A + RV IID D HQGNG D R+ + F YP +
Sbjct: 137 FYNNVALAAMRALSFHRLERVAIIDFDVHQGNGTVDIVGGDERILMCSSFQHPFYPHTH- 195
Query: 233 ARRFIDQKVEVVVN 246
+ ++ E ++N
Sbjct: 196 ----VHRQAENIIN 205
>gi|365158174|ref|ZP_09354409.1| hypothetical protein HMPREF1015_00569 [Bacillus smithii 7_3_47FAA]
gi|363621578|gb|EHL72784.1| hypothetical protein HMPREF1015_00569 [Bacillus smithii 7_3_47FAA]
Length = 394
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL------QSSPN 107
HPF+ + L S L + I+ P A++++L ++H SY++++ Q SP+
Sbjct: 31 HPFNQFRITLTIDLLQSIDALKEEHIIPPRIATEKELTLIHDPSYIQAVKKAGEGQLSPD 90
Query: 108 VS----IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
++ + E P+ F +L VGGT+ A + + A+++GGG H
Sbjct: 91 IAEGYGLGTEDTPI--FKGMHEASALL------VGGTLTAVDWVMTDKAEHAVHLGGGLH 142
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D S+ I Y + + +RV+ +D DAH G+G + F D V L +
Sbjct: 143 HGFRGKASGFCIYNDSSVAIQYLLEKYH-ARVLYVDTDAHHGDGVQWSFYDDPNVCTLSI 201
Query: 222 FNPGIY 227
G Y
Sbjct: 202 HETGRY 207
>gi|262276254|ref|ZP_06054063.1| histone deacetylase/AcuC/AphA family protein [Grimontia hollisae
CIP 101886]
gi|262220062|gb|EEY71378.1| histone deacetylase/AcuC/AphA family protein [Grimontia hollisae
CIP 101886]
Length = 304
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P Y S + + H + K+ + +L + F P+ + E L +H
Sbjct: 2 LPVIYHPIY--SDFPLPEGHRYPLQKYRLLRDYLDTHAFPVTEYRPRPINS--EVLKQIH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+++L +P V + FP L+QR + +GGT L A
Sbjct: 58 DAGYVEALVKG-------TLPLVKMRRIGFPWSEALIQRSL-----TSLGGTTLVVDKAI 105
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+ G AI++ GG+HH D G GFC + D+ L +A I +V+I+D D H G+G
Sbjct: 106 KHGVAIHLTGGYHHAHYDFGSGFCLFNDLVLAASHALTHEGIDKVLIVDCDVHHGDG 162
>gi|157106018|ref|XP_001649129.1| histone deacetylase [Aedes aegypti]
gi|108879955|gb|EAT44180.1| AAEL004416-PB [Aedes aegypti]
Length = 281
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP----PVALFPNCLVQRKVLYPFR 134
++ P + EDLL HS Y++ L+ N I EV L +C + KV Y F
Sbjct: 29 VISPKRGTLEDLLSFHSSDYVECLKRYNNEDDIEEVTDELQEFGLAYDCPMIEKV-YDFV 87
Query: 135 KQVGGTILAAKLAKERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
V G+ L+A A G AIN GG+HH D+ GFC DI + IH ++ +
Sbjct: 88 SSVVGSTLSAVDAILEGASIAINWHGGWHHAQRDKAAGFCYVNDIVIGIHK--LRTKFQK 145
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFN--PGIYP 228
V+ +DLD H G+G E FS V + PG +P
Sbjct: 146 VLYLDLDVHHGDGVEDAFSFSKYVMTVSFHQHEPGYFP 183
>gi|47087397|ref|NP_998596.1| histone deacetylase 8 [Danio rerio]
gi|82240175|sp|Q7SXM0.1|HDAC8_DANRE RecName: Full=Histone deacetylase 8; Short=HD8
gi|33416863|gb|AAH55541.1| Histone deacetylase 8 [Danio rerio]
Length = 378
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + + K+ ++ + + + G L +V+P AS E++ V H++S
Sbjct: 20 VYSPEYIQTCDSLSKV----PNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDS 75
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK---LAKERGW 152
YL+ L S + + L +C V + + + VGG L A L +
Sbjct: 76 YLQHLHKISQDGDNDDPQSADFGLGYDCPVVEGI-FDYAAAVGGATLTAAQNLLDGKCDV 134
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE G C D L I ++ RV+ +D+D H G+G E FS
Sbjct: 135 AINWAGGWHHAKKDEASGSCYVNDAVLGI--LKLREKYDRVLYVDVDLHHGDGVEDAFSF 192
Query: 213 DSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 193 TSKVMTVSLHKFSPGFFP 210
>gi|404417686|ref|ZP_10999474.1| acetoin utilization protein [Staphylococcus arlettae CVD059]
gi|403489888|gb|EJY95445.1| acetoin utilization protein [Staphylococcus arlettae CVD059]
Length = 384
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L L + +++P AS E++ ++HS Y++++ +S + +
Sbjct: 24 HPFNQMRLKLTTELLVDLNALHNHHLIQPRLASDEEIALIHSYDYIQAMHHASHGILSDV 83
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILA---AKLAKERGWAINVGGGFHHCSADEGG 169
E L +Q K ++ ++ G L A + + ++GGG HH
Sbjct: 84 EARKYGLDGEDTMQFKHMHQHSARIVGGALNLADAIMTNKVTNGCHLGGGLHHALPGRAN 143
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GFC Y D+++ I + + N SRV+ ID DAH G+G + F ++ V
Sbjct: 144 GFCVYNDVAITIAHLIQKYN-SRVLCIDTDAHHGDGTQWSFYTNDHV 189
>gi|153831403|ref|ZP_01984070.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
623-39]
gi|148873114|gb|EDL71249.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
623-39]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEGTL--------------SAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|328703842|ref|XP_001946595.2| PREDICTED: histone deacetylase Rpd3-like [Acyrthosiphon pisum]
Length = 491
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
FK + Y D DI K HP + L + G K I P +A+ E++
Sbjct: 6 FKRKVCYYYDSDIENYYYGKSHPMKPHRIRLTHDLLLNYGLYRKMEIYRPHKATAEEMTK 65
Query: 93 VHSESYLKSLQSSPNVSI---IIEVPPVALFPNCLVQRKVLYPFRK-QVGGTILAA-KLA 147
HS+ Y++ L++ ++ I E+ + +C V LY F + GG++ AA KL
Sbjct: 66 FHSDEYIRFLRNVRPGNMNKYIKEMYRFNVGEDCPVFDG-LYQFSQISAGGSVAAAVKLN 124
Query: 148 KE-RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
K+ IN GGG HH E GFC DI L I ++ + R++ ID+D H G+G
Sbjct: 125 KQSTDICINWGGGLHHAKKSEASGFCYVNDIVLGI-LELLKYH-QRILYIDIDVHHGDGV 182
Query: 207 EKDFSSDSRVYILDMFNPGIY 227
E+ F + RV + G Y
Sbjct: 183 EEAFYTTDRVMTVSFHKYGDY 203
>gi|17546325|ref|NP_519727.1| hypothetical protein RSc1606 [Ralstonia solanacearum GMI1000]
gi|17428622|emb|CAD15308.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
Length = 323
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 30/167 (17%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y+ ++ + + P QR++ +P+
Sbjct: 44 EAPRAGDDALLLAHAPDYVSAVGAG-------RLDPAR-------QREIGFPWSPEMVER 89
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 90 SRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--MQRRPGR 147
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
V I+DLD HQGNG D+ V+ L YP EA
Sbjct: 148 TPEHFPVAIVDLDVHQGNGTASILRDDASVFTLSEHGEKNYPFRKEA 194
>gi|443468645|ref|ZP_21058852.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
gi|442897864|gb|ELS24681.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
Length = 305
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + + L G + P E L + H
Sbjct: 3 LPLVYHDDYSPPF---PAEHRFPMEKFRLLYRHLLDSGLTTDARLHRPDICPPEVLALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++ AA+LA E G
Sbjct: 60 CPDYIRRFAEGELSREEQRRLGLP----WSPPLARRTV-----RAVGGSLRAAELALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 111 LACHLAGGTHHAHYDHAAGFCIFNDLAVVSRYLLETGRVQRVLIFDCDVHQGDG 164
>gi|423206155|ref|ZP_17192711.1| hypothetical protein HMPREF1168_02346 [Aeromonas veronii AMC34]
gi|404622660|gb|EKB19521.1| hypothetical protein HMPREF1168_02346 [Aeromonas veronii AMC34]
Length = 298
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L + G+ + E A++E +
Sbjct: 1 MSLRIFYHPLY--SSLTLPERHRFPLAKYQGLFEQLQARGY----PLGEAPAATREQICR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+H Y+ + S I P L++R + + VG TI A++ A E+G
Sbjct: 55 IHDADYVAAALSGQLEDRAIRKIGFPWSP-MLMERTL-----RSVGATIAASRYAIEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
+ + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 109 GLQISGGYHHAHRDHGSGFCLFNDLVIAAQTCLDEGGCEQVLIVDLDVHQGDG 161
>gi|386361023|ref|YP_006059268.1| deacetylase [Thermus thermophilus JL-18]
gi|383510050|gb|AFH39482.1| deacetylase, histone deacetylase/acetoin utilization protein
[Thermus thermophilus JL-18]
Length = 375
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS-EGFLDKNCIVEPLEASKEDLLVVHS 95
+IY +Y + G + HPF + + L + E + +N + P EA++E++L VHS
Sbjct: 2 VIYRDEYRLYNFGPD--HPFSPVRLEMLTSLLQALEAW--QNPLAPP-EATREEVLTVHS 56
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--L 146
E +K ++++ + ++ L FP ++L VGGT+ A+ L
Sbjct: 57 ERLVKRVEAASRGELYPDLEHYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRIL 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCI-HYAFVQLNISRVMIIDLDAHQGNG 205
A E+ + +GGG HH D GFC Y D+S+ I H L RV +D+D H G+G
Sbjct: 111 AGEKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTRAGL---RVAYVDIDVHHGDG 166
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ + V L + G Y
Sbjct: 167 VQWIHYEEGEVLTLSLHESGRY 188
>gi|429885836|ref|ZP_19367411.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae PS15]
gi|429227354|gb|EKY33385.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae PS15]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEGTLSAAKM--------------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|119471110|ref|ZP_01613642.1| histone deacetylase family protein [Alteromonadales bacterium TW-7]
gi|119445766|gb|EAW27048.1| histone deacetylase family protein [Alteromonadales bacterium TW-7]
Length = 299
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + FL +P +A L + H
Sbjct: 1 MQLYYHPLY--SNLPLPEKHRFPIQKYQRLKTEIEHLSFL-PTAFKQPAKARPSQLALCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + + N+S + LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEHYINNFLTG-NLSDKAIKKMGFPYSAQLVERTLL-----SVGGSIQAAEEALKSGLTC 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + + S
Sbjct: 112 NLSGGYHHAYSDYGSGFCIFNDLAIAATHLLSTHKAKTVLIFDCDVHQGDGTAQIINQQS 171
Query: 215 RVYIL 219
I+
Sbjct: 172 HKNII 176
>gi|333907538|ref|YP_004481124.1| histone deacetylase superfamily protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477544|gb|AEF54205.1| histone deacetylase superfamily [Marinomonas posidonica
IVIA-Po-181]
Length = 317
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL++ P Y I F H F K+ + L +G L +P S L+ H
Sbjct: 6 LPLVFHPHYSIPF---PAGHRFPMHKFRLLADTLREQGILTSENEYQPEPLSLAVLMAAH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+ + + I +P + LV+R + + V GTIL ++LA + G
Sbjct: 63 DKQYVHRFIRGELTAKEEKDIGLP----WSEWLVERTL-----RAVSGTILTSQLALQHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH G GFC + D+++ +V+I+D D HQG+G
Sbjct: 114 LACHLAGGTHHAHPAHGAGFCIFNDLAVAALNLVNTKQAKKVLILDCDVHQGDG 167
>gi|153827202|ref|ZP_01979869.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-2]
gi|149738887|gb|EDM53215.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-2]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK--WGRI-CQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + I Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIERQREQSEVWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L ++P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------KLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NG 205
+G
Sbjct: 168 DG 169
>gi|237801473|ref|ZP_04589934.1| histone deacetylase family protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024332|gb|EGI04389.1| histone deacetylase family protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 307
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---PPEHRFPMDKFRLLRDYLVDSGLTSDVQLIRPDICPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R V + VGG++L A +A + G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLTADMALKHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDG 164
>gi|375266235|ref|YP_005023678.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. EJY3]
gi|369841555|gb|AEX22699.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. EJY3]
Length = 305
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWG----RICQFLSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + + L +E + EP S D+
Sbjct: 2 LPLIYHPIY--SKLALPEGHRYPIMKYQYLYEAVQEKLENENSQSRVQFFEPTALSVADI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L S +P + FP L+ R + GT+L A
Sbjct: 60 KRVHEAEYVDLLVSG-------SMPAAKMRRIGFPWSEALITRTL-----TSAAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G A+++ GG+HH D G GFC + D+ + + ++ +V++ID D H G+
Sbjct: 108 EKALEHGVALHLSGGYHHAHRDFGSGFCLFNDLVIAAKHMLDHDDVDKVLVIDSDVHHGD 167
Query: 205 G 205
G
Sbjct: 168 G 168
>gi|381190206|ref|ZP_09897729.1| T-histone deacetylase [Thermus sp. RL]
gi|380451799|gb|EIA39400.1| T-histone deacetylase [Thermus sp. RL]
Length = 375
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS-EGFLDKNCIVEPLEASKEDLLVVHS 95
+IY +Y + G + HPF + + L + E + +N + P EA++E++L VHS
Sbjct: 2 VIYREEYRLYNFGPD--HPFSPVRLEMLTSLLQALEAW--QNPLAPP-EATREEVLSVHS 56
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK--L 146
E +K ++++ + ++ L FP ++L VGGT+ A+ L
Sbjct: 57 ERLVKRVEAASRGELFPDLEHYGLGTGDTPVFPGMDRAARIL------VGGTLEGARRIL 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCI-HYAFVQLNISRVMIIDLDAHQGNG 205
A E+ + +GGG HH D GFC Y D+S+ I H L RV +D+D H G+G
Sbjct: 111 AGEKR-VLQLGGGLHHAQYDRASGFCVYNDLSVAIRHMTRAGL---RVAYVDIDVHHGDG 166
Query: 206 HEKDFSSDSRVYILDMFNPGIY 227
+ + V L + G Y
Sbjct: 167 VQWIHYEEGEVLTLSLHESGRY 188
>gi|344304180|gb|EGW34429.1| histone deacetylase HDA1 [Spathaspora passalidarum NRRL Y-27907]
Length = 891
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCI-----VEPL-------EASKEDLLVVHSESYLKS 101
HP D + RI + L+ G + + + + PL EA+ E++L VHSES+LK
Sbjct: 226 HPEDPRRIYRIYKKLAEAGLIQDSSLSGVNDIGPLMLKIPIREATAEEILEVHSESHLKF 285
Query: 102 LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN----VG 157
++S+ ++ + + V + R GGTI A K E G N V
Sbjct: 286 IESTETMTRDQLMEETEKGDSIYVNNDSYFSARLSCGGTIEACKAVIE-GRVKNSLAVVR 344
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQL--NISRVMIIDLDAHQGNGHEKDFSSDSR 215
HH D GGFC ++++++ ++ +++IID D H GNG +K F +D R
Sbjct: 345 PPGHHAEPDSPGGFCLFSNVAVAAKNLLKTYPESVRKIVIIDWDIHHGNGTQKSFYNDPR 404
Query: 216 VYILDMFNPGIYPRDYEARRF 236
V + M YE RF
Sbjct: 405 VLYISMHR-------YENGRF 418
>gi|395527496|ref|XP_003765880.1| PREDICTED: histone deacetylase 8-like [Sarcophilus harrisii]
Length = 379
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L + +V+P AS E++ H+++
Sbjct: 21 IYSPEYVRTCDSLAKV----PKRASMVHSLIEAYELLKEMRVVKPKVASMEEMASFHTDA 76
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAK--LAKERGW 152
YL+ LQ S + L +C + + + VGG TI AA+ + +
Sbjct: 77 YLQHLQKVSEEGDDEHPDSVEFGLGYDCPSTEGI-FDYAAAVGGATITAAQCLIDGKCNI 135
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I + ++ R++ IDLD H G+G E FS
Sbjct: 136 AINWAGGWHHAKKDEASGFCYLNDAVLGILH--LRRKFDRILYIDLDLHHGDGVEDAFSF 193
Query: 213 DSRVYILDM--FNPGIYP 228
S+V + + F+PG +P
Sbjct: 194 TSKVMTVSLHKFSPGFFP 211
>gi|384566935|ref|ZP_10014039.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saccharomonospora glauca K62]
gi|384522789|gb|EIE99984.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saccharomonospora glauca K62]
Length = 410
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP----NVS 109
HPF+ + + ++ G LD + P A E+L HS Y+++++ +P +V
Sbjct: 38 HPFNPVRLDLTIRLATALGVLDDVPFLVPEPAEAEELYRAHSAEYVEAVKQAPMAGWDVG 97
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGW-AINVGGGFHHCSADE 167
+ P +F + ++ VG T+L A+ +A+ R A+N+ GG HH
Sbjct: 98 HGLGTPDNPVFTDMHEASSLV------VGSTLLGARRIAEGRARRAVNIAGGLHHAMRAR 151
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GFC Y D ++ I + + R+ +D D H G+G + F D RV + +
Sbjct: 152 ASGFCVYNDCAVAISW-LLDHGFDRIAYVDTDVHHGDGVQAAFYGDPRVLTISL 204
>gi|398845414|ref|ZP_10602449.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM84]
gi|398253577|gb|EJN38699.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM84]
Length = 304
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLHDHLVDSGLTCDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y++ + ++S + + L +R V + VGG++L A++A G A
Sbjct: 60 DRGYIERYMNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLTAEMALRHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 114 HLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDG 164
>gi|442609735|ref|ZP_21024469.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441748751|emb|CCQ10531.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 307
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 24/178 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y +Y SF + H F SK+ + + G + N + +P + L VH
Sbjct: 12 LPLVYHSNYSFSF---DPNHRFVMSKFANLYAEVKKMGLVGNN-LYQPELGAPSRLETVH 67
Query: 95 SESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+YL L ++ + + VP L+ R P GT+ A+LA
Sbjct: 68 CENYLWDLWHDRLDDKAMRRIGLPWSVP--------LMARTFTAPL-----GTLKTAELA 114
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
G A ++ GG HH D G GFC D++ H + V+I DLD HQG+G
Sbjct: 115 LNHGIACHLAGGTHHAHYDFGSGFCMVNDLAFTAHELINAGKVHNVLIFDLDVHQGDG 172
>gi|258625470|ref|ZP_05720363.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM603]
gi|258582274|gb|EEW07130.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM603]
Length = 306
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + D P A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEDIVRQQAQSEEWRDVFGFFTPQIAELSLVK 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
+H Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SLHDSEYVQALLDGA-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 RALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
>gi|337748157|ref|YP_004642319.1| acetoin utilization protein AcuC [Paenibacillus mucilaginosus
KNP414]
gi|336299346|gb|AEI42449.1| Acetoin utilization protein AcuC [Paenibacillus mucilaginosus
KNP414]
Length = 398
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + L G L +C P+ E L VH++ Y++++ +++
Sbjct: 28 HPFNQKRLLLTVDLLRRAGALPASCQEPPMPVDPEKLCTVHAKEYVEAV-----IALSHP 82
Query: 114 VPPVALFPNCLVQRKVLY-------PF--------RKQVGGTILA--AKLAKERGWAINV 156
+P A ++R Y PF VGG++ A A + A+++
Sbjct: 83 MPDEAW-----MRRAATYGLDTEDTPFFHGMHEATSTVVGGSVQAVDAVMTGRTPHALHL 137
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGG HH + +G GFC Y D S+ I +A + +RV+ ID D H G+G + F +D V
Sbjct: 138 GGGLHHALSGKGAGFCVYNDASVAIEHAKCEYG-ARVLYIDTDVHHGDGVQWSFYTDPDV 196
Query: 217 YILDMFNPGIY 227
+ G Y
Sbjct: 197 CTFSIHETGKY 207
>gi|147901604|ref|NP_001085711.1| histone deacetylase 8 [Xenopus laevis]
gi|82184398|sp|Q6GPA7.1|HDAC8_XENLA RecName: Full=Histone deacetylase 8; Short=HD8
gi|49119229|gb|AAH73234.1| MGC80565 protein [Xenopus laevis]
Length = 325
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+V+P AS E++ H+++YL+ L S + E L +C + + Y +
Sbjct: 4 VVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETLEYGLGYDCPITEGI-YDYAAA 62
Query: 137 VGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG L A + + A+N GG+HH DE GFC D L I ++ RV
Sbjct: 63 VGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGI--LKLREKFDRV 120
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYP 228
+ +D+D H G+G E FS S+V + + F+PG +P
Sbjct: 121 LYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFP 157
>gi|392554229|ref|ZP_10301366.1| histone deacetylase/AcuC/AphA family protein [Pseudoalteromonas
undina NCIMB 2128]
Length = 295
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ ++ + G+ + P A+K L + H
Sbjct: 1 MQLFYHPLY--SALTLPERHRFPIKKYQQLKHEVERLGYTR---FISPSPATKAQLSLCH 55
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
S Y+ N S+ + FP+ LV+R LY VG +I AA+ A E G
Sbjct: 56 SSDYIADF---LNGSLTDKAVKKMGFPHSYKLVER-TLYS----VGASIQAAETALESGL 107
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A N+ GG+HH ++ G GFC + D+++ + V+I D D HQG+G
Sbjct: 108 AANLSGGYHHAYSNYGSGFCIFNDLAIAAAHLISTEQADTVLIFDCDVHQGDG 160
>gi|299535417|ref|ZP_07048739.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|424737585|ref|ZP_18166036.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
gi|298729178|gb|EFI69731.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|422948440|gb|EKU42819.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
Length = 386
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 34 KLPLIYSPDYDISFLGIE--KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
K +YSP+ LG + HPF+ + L + LD IV A++E+LL
Sbjct: 3 KAVFVYSPEQ----LGYKFSDTHPFNHKRLTLTMDLLKNINALDDVDIVPARVATEEELL 58
Query: 92 VVHSESYLK--------SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
+ H Y+ L + S I +F N L VGGT+ A
Sbjct: 59 LAHDSKYIDIVKKAGHGELSEAQCESYGIGTEDTPIFENMHEASAQL------VGGTLTA 112
Query: 144 AKLAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
E A+N+GGG HH GFC Y D ++ I Y + N +RV+ +D DAH
Sbjct: 113 VDYVMEGKAEHALNLGGGLHHGFRGRASGFCIYNDSTVAIRYLQEKYN-ARVLYVDTDAH 171
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIY 227
G+G + F D V L + G Y
Sbjct: 172 HGDGVQWSFYEDPNVCTLSIHETGRY 197
>gi|422648104|ref|ZP_16711229.1| histone deacetylase family protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961643|gb|EGH61903.1| histone deacetylase family protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 305
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---PADHRFPMDKFRLLRDYLVDSGLTRDVQLIRPELCPTDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYIGRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEKALTHGM 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A ++ GG HH D GFC + D+++ HY + +++I D D HQG+G
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLQSGRVHKILIFDCDVHQGDG 164
>gi|83647500|ref|YP_435935.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83635543|gb|ABC31510.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 307
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 6/202 (2%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K L Y D + +G + HP + I L G L + +VEP E ++ ++
Sbjct: 1 MKTALFYHKDCTLHDMG--EGHPESPMRLQAIMDRLEHAGILQEVDLVEPQETDRDKIIR 58
Query: 93 VHSESYLKSLQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
VH Y++ L++ +P+ I+ P AL + L + + +L+ + A
Sbjct: 59 VHPSRYVEQLENLNPDKGRIMVDPDTALMRHSLRAAYLAAGSAVEAANMVLSGQ-ANTAF 117
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+ G HH + GFC + +I++ +A + R+ I+D D HQGNG F
Sbjct: 118 CAVRPPG--HHAERSKSMGFCFFNNIAIAARHAMDFHGLERIAIVDFDVHQGNGTVDIFQ 175
Query: 212 SDSRVYILDMFNPGIYPRDYEA 233
D RV F +YP + A
Sbjct: 176 DDPRVLFCSSFEYPLYPFSHHA 197
>gi|393216237|gb|EJD01728.1| histone deacetylase complex, catalytic component RPD3 [Fomitiporia
mediterranea MF3/22]
Length = 416
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K + Y D D+ H + +S+ G LDK ++ P A+ E++
Sbjct: 3 KRRVAYYYDNDVGLFSYGTWHAMKPHRIRMTHDLVSTYGMLDKMQVLRPRRATSENMTAF 62
Query: 94 HSESYLKSLQS-SPNVSIII--EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
HS+ Y+ L +P+ ++ + + L + V GG+I AAK +
Sbjct: 63 HSDEYIHFLNRVTPDSALELTGQGTRFLLGEDNPAFEGVFEFCSISAGGSIDAAKRVADG 122
Query: 151 GW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
AIN GG HH E GFC DI LCI + RV+ ID+D H G+G E+
Sbjct: 123 SADIAINWAGGLHHAKKSEASGFCYVNDIVLCI--LELLRTYPRVLYIDIDIHHGDGVEE 180
Query: 209 DFSSDSRVYILDMFNPGIY 227
F + RV+ G Y
Sbjct: 181 AFYTTDRVFTCSFHKFGEY 199
>gi|3023253|sp|Q56195.1|ACUC_STAXY RecName: Full=Acetoin utilization protein AcuC
gi|1177686|emb|CAA64714.1| acuC [Staphylococcus xylosus]
Length = 385
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L G L ++ I+ P A+ ++L ++H+ Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDELSLIHAYDYIQAIRHASHGILSEN 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGG 169
E L +Q ++++ ++ G L G N +GGG HH
Sbjct: 85 EAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GFC Y D+++ I Y + N RV+ ID DAH G+G + F ++ + I + G
Sbjct: 145 GFCIYNDVAITISYLMQKYN-QRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETG 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,936,316,197
Number of Sequences: 23463169
Number of extensions: 163952973
Number of successful extensions: 314365
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3163
Number of HSP's successfully gapped in prelim test: 2331
Number of HSP's that attempted gapping in prelim test: 305933
Number of HSP's gapped (non-prelim): 6334
length of query: 251
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 112
effective length of database: 9,097,814,876
effective search space: 1018955266112
effective search space used: 1018955266112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)