Query 025522
Match_columns 251
No_of_seqs 181 out of 1539
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:02:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025522hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 9.4E-31 3.2E-35 214.2 13.4 152 68-251 3-155 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 2.5E-31 8.7E-36 219.7 7.7 150 69-250 5-156 (164)
3 3mng_A Peroxiredoxin-5, mitoch 100.0 1.4E-27 4.9E-32 199.7 16.7 154 66-249 12-173 (173)
4 3uma_A Hypothetical peroxiredo 99.9 5.2E-27 1.8E-31 198.2 15.1 151 67-249 24-184 (184)
5 3p7x_A Probable thiol peroxida 99.9 2E-25 6.8E-30 183.0 17.4 144 68-251 19-165 (166)
6 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.6E-25 5.6E-30 183.5 15.7 148 69-249 4-162 (162)
7 1psq_A Probable thiol peroxida 99.9 6.8E-25 2.3E-29 179.3 16.7 144 68-250 15-161 (163)
8 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 8.1E-25 2.8E-29 181.4 17.1 149 69-249 3-159 (167)
9 3gkn_A Bacterioferritin comigr 99.9 8.2E-25 2.8E-29 177.6 16.6 154 64-250 2-158 (163)
10 2yzh_A Probable thiol peroxida 99.9 8E-25 2.7E-29 179.9 15.9 146 68-250 20-168 (171)
11 2pwj_A Mitochondrial peroxired 99.9 5.7E-25 1.9E-29 182.6 14.6 150 68-249 6-171 (171)
12 3tue_A Tryparedoxin peroxidase 99.9 4.1E-25 1.4E-29 191.9 14.0 145 68-250 25-181 (219)
13 3ixr_A Bacterioferritin comigr 99.9 4E-25 1.4E-29 184.1 13.1 149 69-250 21-174 (179)
14 3sbc_A Peroxiredoxin TSA1; alp 99.9 6.4E-25 2.2E-29 190.4 14.5 145 68-250 22-177 (216)
15 3zrd_A Thiol peroxidase; oxido 99.9 7.1E-25 2.4E-29 186.5 14.1 147 68-250 51-200 (200)
16 1q98_A Thiol peroxidase, TPX; 99.9 7.2E-25 2.5E-29 179.7 13.6 146 69-250 17-165 (165)
17 3drn_A Peroxiredoxin, bacterio 99.9 4.5E-24 1.5E-28 173.8 16.7 142 69-250 2-145 (161)
18 4f82_A Thioredoxin reductase; 99.9 2.6E-24 8.9E-29 181.2 14.6 151 69-251 10-176 (176)
19 1xiy_A Peroxiredoxin, pfaop; a 99.9 3E-24 1E-28 181.5 15.0 150 70-251 2-179 (182)
20 3keb_A Probable thiol peroxida 99.9 5.3E-24 1.8E-28 185.6 16.7 144 68-250 21-172 (224)
21 2xhf_A Peroxiredoxin 5; oxidor 99.9 1.3E-24 4.4E-29 182.2 10.2 151 68-250 13-170 (171)
22 1xvw_A Hypothetical protein RV 99.9 2.7E-23 9.2E-28 167.8 17.1 145 69-250 9-156 (160)
23 1prx_A HORF6; peroxiredoxin, h 99.9 1.6E-23 5.4E-28 181.7 16.5 150 69-250 5-165 (224)
24 1nm3_A Protein HI0572; hybrid, 99.9 1.3E-23 4.5E-28 182.2 15.8 150 69-250 3-163 (241)
25 1n8j_A AHPC, alkyl hydroperoxi 99.9 1.8E-23 6.2E-28 175.3 15.0 143 70-250 2-152 (186)
26 2c0d_A Thioredoxin peroxidase 99.9 2.3E-23 8E-28 180.3 16.1 148 65-250 21-180 (221)
27 2v2g_A Peroxiredoxin 6; oxidor 99.9 3.2E-23 1.1E-27 181.2 15.1 150 69-250 3-161 (233)
28 1xcc_A 1-Cys peroxiredoxin; un 99.9 3.7E-23 1.3E-27 178.9 14.4 150 69-250 3-162 (220)
29 2pn8_A Peroxiredoxin-4; thiore 99.9 9.7E-23 3.3E-27 174.7 15.0 146 67-250 17-173 (211)
30 2i81_A 2-Cys peroxiredoxin; st 99.9 1.5E-22 5.1E-27 173.7 16.1 146 67-250 19-176 (213)
31 2a4v_A Peroxiredoxin DOT5; yea 99.9 4.1E-23 1.4E-27 167.5 10.8 133 67-237 5-139 (159)
32 1xvq_A Thiol peroxidase; thior 99.9 1.5E-22 5.1E-27 167.6 14.1 145 68-250 17-164 (175)
33 3tjj_A Peroxiredoxin-4; thiore 99.9 1.5E-22 5E-27 179.1 14.9 146 67-250 60-216 (254)
34 1we0_A Alkyl hydroperoxide red 99.9 2.9E-22 1E-26 166.8 15.6 143 70-250 2-153 (187)
35 3qpm_A Peroxiredoxin; oxidored 99.9 2.4E-22 8.2E-27 175.9 15.6 146 67-250 46-202 (240)
36 2h01_A 2-Cys peroxiredoxin; th 99.9 1.4E-22 4.7E-27 169.7 13.2 143 70-250 1-155 (192)
37 1uul_A Tryparedoxin peroxidase 99.9 4.6E-22 1.6E-26 168.2 16.4 145 68-250 5-161 (202)
38 2jsy_A Probable thiol peroxida 99.9 8.5E-23 2.9E-27 166.5 11.1 143 68-250 17-163 (167)
39 2bmx_A Alkyl hydroperoxidase C 99.9 6.5E-22 2.2E-26 166.2 16.4 145 67-250 2-166 (195)
40 1qmv_A Human thioredoxin perox 99.9 6.2E-22 2.1E-26 166.5 16.1 144 69-250 5-159 (197)
41 1zye_A Thioredoxin-dependent p 99.9 8.7E-22 3E-26 169.6 16.0 145 68-250 26-181 (220)
42 4eo3_A Bacterioferritin comigr 99.9 3.3E-22 1.1E-26 182.4 14.2 133 73-250 2-135 (322)
43 3ztl_A Thioredoxin peroxidase; 99.9 9.7E-22 3.3E-26 169.4 16.1 144 68-250 39-194 (222)
44 3a2v_A Probable peroxiredoxin; 99.9 9.5E-22 3.2E-26 173.7 15.2 145 69-250 5-158 (249)
45 1zof_A Alkyl hydroperoxide-red 99.9 1.3E-21 4.3E-26 164.6 14.7 143 70-250 2-157 (198)
46 3gl3_A Putative thiol:disulfid 99.9 5.5E-21 1.9E-25 152.2 16.5 136 69-249 3-140 (152)
47 3u5r_E Uncharacterized protein 99.9 2.9E-21 1E-25 165.6 15.4 123 68-233 31-162 (218)
48 3kcm_A Thioredoxin family prot 99.9 6.7E-21 2.3E-25 152.0 16.1 136 70-249 3-141 (154)
49 3ewl_A Uncharacterized conserv 99.9 2.4E-20 8.2E-25 147.1 16.5 129 70-250 2-137 (142)
50 2ywi_A Hypothetical conserved 99.8 3E-20 1E-24 154.6 16.4 139 68-249 17-169 (196)
51 3hdc_A Thioredoxin family prot 99.8 1.7E-20 5.7E-25 151.5 13.2 145 58-248 4-149 (158)
52 1jfu_A Thiol:disulfide interch 99.8 3E-20 1E-24 153.6 14.7 143 67-249 32-178 (186)
53 3lwa_A Secreted thiol-disulfid 99.8 1.3E-19 4.5E-24 149.5 17.8 136 68-249 30-176 (183)
54 4fo5_A Thioredoxin-like protei 99.8 3.5E-20 1.2E-24 147.0 13.6 121 67-232 5-131 (143)
55 3eur_A Uncharacterized protein 99.8 9.7E-20 3.3E-24 144.3 15.5 130 69-250 5-141 (142)
56 2lrn_A Thiol:disulfide interch 99.8 9.3E-20 3.2E-24 146.0 15.5 132 69-249 3-139 (152)
57 2f9s_A Thiol-disulfide oxidore 99.8 1.8E-19 6.1E-24 143.7 17.0 120 70-233 1-122 (151)
58 3eyt_A Uncharacterized protein 99.8 6.4E-20 2.2E-24 147.1 14.2 120 71-234 2-137 (158)
59 3fw2_A Thiol-disulfide oxidore 99.8 7.9E-20 2.7E-24 146.1 14.4 121 68-232 4-134 (150)
60 1xzo_A BSSCO, hypothetical pro 99.8 8.3E-20 2.8E-24 148.7 14.6 152 68-250 6-168 (174)
61 3hcz_A Possible thiol-disulfid 99.8 3.1E-20 1.1E-24 146.4 11.1 133 68-249 4-141 (148)
62 2obi_A PHGPX, GPX-4, phospholi 99.8 9.2E-20 3.1E-24 151.2 13.7 97 65-163 17-124 (183)
63 3kh7_A Thiol:disulfide interch 99.8 4.4E-19 1.5E-23 146.7 17.1 121 66-234 27-152 (176)
64 3lor_A Thiol-disulfide isomera 99.8 1E-19 3.5E-24 146.0 12.8 120 71-234 5-140 (160)
65 2l5o_A Putative thioredoxin; s 99.8 2.6E-19 8.7E-24 142.6 14.7 131 70-249 3-136 (153)
66 2cvb_A Probable thiol-disulfid 99.8 4.7E-19 1.6E-23 146.8 16.1 101 68-171 6-115 (188)
67 2p31_A CL683, glutathione pero 99.8 8.1E-20 2.8E-24 151.6 11.3 91 67-159 21-121 (181)
68 2lrt_A Uncharacterized protein 99.8 4.5E-19 1.5E-23 143.0 15.4 131 68-249 8-143 (152)
69 3erw_A Sporulation thiol-disul 99.8 7.1E-19 2.4E-23 137.8 16.0 133 67-249 7-144 (145)
70 2gs3_A PHGPX, GPX-4, phospholi 99.8 3.4E-19 1.2E-23 148.3 13.8 93 65-159 19-120 (185)
71 3fkf_A Thiol-disulfide oxidore 99.8 4.1E-19 1.4E-23 139.9 13.4 121 68-232 4-132 (148)
72 3kij_A Probable glutathione pe 99.8 3.7E-19 1.3E-23 147.3 12.9 93 67-161 10-112 (180)
73 3or5_A Thiol:disulfide interch 99.8 2.3E-18 8E-23 138.4 17.2 128 68-234 7-136 (165)
74 2v1m_A Glutathione peroxidase; 99.8 8.9E-19 3E-23 141.7 14.4 93 69-163 5-109 (169)
75 3me7_A Putative uncharacterize 99.8 5.9E-19 2E-23 145.5 13.1 142 70-250 2-158 (170)
76 2p5q_A Glutathione peroxidase 99.8 8E-19 2.7E-23 142.1 13.0 93 69-163 6-110 (170)
77 3ia1_A THIO-disulfide isomeras 99.8 9E-19 3.1E-23 139.8 12.6 129 68-249 4-139 (154)
78 2ggt_A SCO1 protein homolog, m 99.8 2.3E-18 7.8E-23 138.6 14.4 139 74-249 2-156 (164)
79 2k6v_A Putative cytochrome C o 99.8 5.1E-19 1.7E-23 143.5 10.6 148 69-250 10-169 (172)
80 2lja_A Putative thiol-disulfid 99.8 1.1E-18 3.9E-23 138.7 12.3 135 69-249 3-141 (152)
81 2vup_A Glutathione peroxidase- 99.8 1E-18 3.5E-23 146.0 12.4 93 68-162 21-125 (190)
82 3raz_A Thioredoxin-related pro 99.8 1.2E-18 4.1E-23 139.3 11.9 131 74-249 4-138 (151)
83 2rli_A SCO2 protein homolog, m 99.8 1.2E-17 4.1E-22 135.5 17.2 137 76-249 7-159 (171)
84 1lu4_A Soluble secreted antige 99.8 7.8E-18 2.7E-22 130.7 15.3 129 73-250 2-132 (136)
85 4evm_A Thioredoxin family prot 99.8 1.2E-17 4E-22 128.7 16.1 126 74-249 1-134 (138)
86 3ha9_A Uncharacterized thiored 99.8 7.9E-19 2.7E-23 142.1 9.7 99 68-171 10-129 (165)
87 2i3y_A Epididymal secretory gl 99.8 4.1E-18 1.4E-22 147.0 14.5 89 70-161 30-134 (215)
88 2f8a_A Glutathione peroxidase 99.8 3.3E-18 1.1E-22 146.2 13.5 90 70-161 21-126 (208)
89 2b5x_A YKUV protein, TRXY; thi 99.8 4.2E-18 1.4E-22 133.8 13.0 120 70-234 2-130 (148)
90 2ls5_A Uncharacterized protein 99.6 2.6E-20 9E-25 150.0 0.0 137 68-249 6-146 (159)
91 2r37_A Glutathione peroxidase 99.8 5.8E-18 2E-22 145.0 14.0 87 72-161 14-116 (207)
92 3dwv_A Glutathione peroxidase- 99.8 6.4E-19 2.2E-23 147.1 6.3 89 69-159 20-118 (187)
93 2b1k_A Thiol:disulfide interch 99.7 5.7E-17 2E-21 131.5 17.2 121 66-233 19-144 (168)
94 1zzo_A RV1677; thioredoxin fol 99.7 5.3E-17 1.8E-21 125.5 15.9 95 72-170 2-99 (136)
95 2b7k_A SCO1 protein; metalloch 99.7 1.3E-17 4.4E-22 140.9 13.2 137 69-233 13-163 (200)
96 2hyx_A Protein DIPZ; thioredox 99.7 2.4E-17 8.4E-22 152.1 15.7 123 67-233 49-183 (352)
97 3cmi_A Peroxiredoxin HYR1; thi 99.7 2.9E-18 1E-22 140.4 8.3 88 71-161 8-105 (171)
98 1kng_A Thiol:disulfide interch 99.7 1E-16 3.4E-21 127.6 13.8 122 66-234 5-137 (156)
99 2h30_A Thioredoxin, peptide me 99.7 3.6E-17 1.2E-21 131.5 10.7 130 69-249 14-151 (164)
100 1i5g_A Tryparedoxin II; electr 99.7 5.1E-17 1.7E-21 128.6 8.7 119 71-233 3-128 (144)
101 4hde_A SCO1/SENC family lipopr 99.7 3E-16 1E-20 129.6 12.9 146 71-250 8-166 (170)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.7 5.7E-17 1.9E-21 128.8 7.2 125 70-239 3-134 (146)
103 2lus_A Thioredoxion; CR-Trp16, 99.5 1E-17 3.5E-22 131.6 0.0 123 73-237 2-131 (143)
104 1o73_A Tryparedoxin; electron 99.6 4.7E-16 1.6E-20 122.6 7.4 97 70-169 3-105 (144)
105 3s9f_A Tryparedoxin; thioredox 99.6 4.3E-16 1.5E-20 127.5 4.5 83 69-154 22-107 (165)
106 4h86_A Peroxiredoxin type-2; o 99.3 3.9E-11 1.3E-15 102.3 15.1 150 66-249 23-199 (199)
107 2ju5_A Thioredoxin disulfide i 98.8 1.1E-09 3.9E-14 88.1 2.2 67 69-141 24-94 (154)
108 2l57_A Uncharacterized protein 98.7 1E-08 3.5E-13 78.9 4.3 89 73-164 4-95 (126)
109 3fk8_A Disulphide isomerase; A 98.6 1.2E-07 4.1E-12 73.4 8.8 44 96-140 28-73 (133)
110 2fwh_A Thiol:disulfide interch 98.6 7.5E-09 2.6E-13 81.1 1.7 92 69-164 4-104 (134)
111 3hxs_A Thioredoxin, TRXP; elec 98.6 2.8E-08 9.6E-13 77.7 4.9 83 80-165 36-119 (141)
112 3ul3_B Thioredoxin, thioredoxi 98.5 6.2E-08 2.1E-12 74.9 4.5 89 70-163 19-108 (128)
113 2pu9_C TRX-F, thioredoxin F-ty 98.4 1.5E-06 5E-11 65.0 9.8 41 97-139 24-64 (111)
114 2f51_A Thioredoxin; electron t 98.4 2.8E-08 9.5E-13 76.2 -0.6 79 80-160 5-85 (118)
115 3p2a_A Thioredoxin 2, putative 98.4 1.4E-07 4.8E-12 74.6 2.9 90 70-162 30-120 (148)
116 2kuc_A Putative disulphide-iso 98.4 2.2E-06 7.6E-11 65.6 9.7 24 96-119 26-49 (130)
117 2dml_A Protein disulfide-isome 98.4 8.4E-07 2.9E-11 68.0 7.1 68 95-163 33-101 (130)
118 2voc_A Thioredoxin; electron t 98.3 5.5E-06 1.9E-10 62.2 10.8 44 96-140 16-59 (112)
119 1faa_A Thioredoxin F; electron 98.3 3.2E-06 1.1E-10 64.3 9.6 42 96-139 36-77 (124)
120 2dj1_A Protein disulfide-isome 98.3 6.5E-07 2.2E-11 69.6 5.2 78 80-159 19-99 (140)
121 3f3q_A Thioredoxin-1; His TAG, 98.3 2.6E-07 9E-12 69.5 2.5 74 90-165 17-91 (109)
122 1z6n_A Hypothetical protein PA 98.3 1.9E-07 6.3E-12 77.1 1.3 71 96-168 53-127 (167)
123 2l5l_A Thioredoxin; structural 98.3 1.5E-06 5E-11 67.9 6.4 68 96-164 37-105 (136)
124 4euy_A Uncharacterized protein 98.2 8E-07 2.7E-11 66.0 4.4 72 90-163 11-83 (105)
125 2dj3_A Protein disulfide-isome 98.2 4.7E-07 1.6E-11 69.7 2.6 84 79-163 8-93 (133)
126 3aps_A DNAJ homolog subfamily 98.2 1.4E-06 4.8E-11 66.0 5.1 74 95-169 19-93 (122)
127 3f9u_A Putative exported cytoc 98.2 8E-07 2.7E-11 71.9 3.6 45 96-141 46-93 (172)
128 3gix_A Thioredoxin-like protei 98.2 1.7E-06 5.9E-11 69.3 5.2 68 96-164 22-90 (149)
129 2j23_A Thioredoxin; immune pro 98.2 8.3E-07 2.9E-11 67.9 3.1 72 94-165 30-102 (121)
130 3d6i_A Monothiol glutaredoxin- 98.2 1.4E-06 4.8E-11 65.1 4.3 63 97-159 21-84 (112)
131 1x5d_A Protein disulfide-isome 98.2 1.6E-06 5.6E-11 66.4 4.7 68 96-163 24-95 (133)
132 3die_A Thioredoxin, TRX; elect 98.2 1.7E-06 5.8E-11 63.4 4.5 67 96-163 18-85 (106)
133 3qfa_C Thioredoxin; protein-pr 98.1 1.4E-06 4.6E-11 66.3 3.9 64 96-161 30-94 (116)
134 1nsw_A Thioredoxin, TRX; therm 98.1 7.4E-07 2.5E-11 65.6 2.1 64 94-158 14-78 (105)
135 1x5e_A Thioredoxin domain cont 98.1 1.9E-06 6.6E-11 65.8 4.3 59 100-158 25-84 (126)
136 2vim_A Thioredoxin, TRX; thior 98.1 2.1E-06 7.3E-11 62.7 4.3 65 96-162 18-83 (104)
137 1t00_A Thioredoxin, TRX; redox 98.1 2.8E-06 9.5E-11 63.3 4.8 60 95-155 21-80 (112)
138 1sen_A Thioredoxin-like protei 98.1 5E-08 1.7E-12 79.5 -5.4 92 75-170 27-123 (164)
139 2djj_A PDI, protein disulfide- 98.1 2.1E-06 7E-11 64.9 4.0 80 80-163 9-93 (121)
140 1dby_A Chloroplast thioredoxin 98.1 4.5E-06 1.5E-10 61.5 5.6 62 96-158 18-80 (107)
141 3m9j_A Thioredoxin; oxidoreduc 98.0 2.9E-06 9.8E-11 62.2 3.8 67 96-164 19-86 (105)
142 1ep7_A Thioredoxin CH1, H-type 98.0 4.4E-06 1.5E-10 62.0 4.8 58 97-155 24-81 (112)
143 1ti3_A Thioredoxin H, PTTRXH1; 98.0 5E-06 1.7E-10 61.7 5.1 61 97-159 26-87 (113)
144 1fb6_A Thioredoxin M; electron 98.0 1.9E-06 6.7E-11 63.0 2.5 62 96-158 17-79 (105)
145 1xfl_A Thioredoxin H1; AT3G510 98.0 3.8E-06 1.3E-10 64.7 4.2 58 96-155 37-94 (124)
146 3h79_A Thioredoxin-like protei 98.0 1.5E-05 5.2E-10 61.1 7.5 67 96-162 32-103 (127)
147 1syr_A Thioredoxin; SGPP, stru 98.0 5.8E-06 2E-10 61.9 4.9 60 94-155 23-82 (112)
148 3idv_A Protein disulfide-isome 98.0 5.5E-06 1.9E-10 69.8 5.0 70 92-161 27-99 (241)
149 1gh2_A Thioredoxin-like protei 98.0 6.1E-06 2.1E-10 61.1 4.5 61 96-158 20-81 (107)
150 1w4v_A Thioredoxin, mitochondr 98.0 7E-06 2.4E-10 62.4 4.9 62 96-158 30-92 (119)
151 2i4a_A Thioredoxin; acidophIle 98.0 1.1E-05 3.7E-10 59.1 5.8 63 95-158 18-81 (107)
152 2yzu_A Thioredoxin; redox prot 98.0 1.8E-06 6.1E-11 63.4 1.5 63 95-158 16-79 (109)
153 1xwb_A Thioredoxin; dimerizati 98.0 6.8E-06 2.3E-10 60.1 4.6 62 96-158 19-81 (106)
154 1thx_A Thioredoxin, thioredoxi 98.0 9.4E-06 3.2E-10 60.2 5.4 63 95-158 23-86 (115)
155 3cxg_A Putative thioredoxin; m 98.0 2.2E-06 7.5E-11 67.0 1.9 59 97-158 40-99 (133)
156 2ppt_A Thioredoxin-2; thiredox 98.0 1.2E-06 4.1E-11 70.6 0.2 66 93-159 60-126 (155)
157 3tco_A Thioredoxin (TRXA-1); d 97.9 7.8E-06 2.7E-10 60.0 4.6 63 95-158 19-82 (109)
158 2yj7_A LPBCA thioredoxin; oxid 97.2 1.2E-06 3.9E-11 64.0 0.0 60 95-155 17-76 (106)
159 3uvt_A Thioredoxin domain-cont 97.9 4E-06 1.4E-10 61.9 2.9 66 97-162 21-89 (111)
160 3gnj_A Thioredoxin domain prot 97.9 7.8E-06 2.7E-10 60.4 4.5 67 95-162 20-87 (111)
161 2vm1_A Thioredoxin, thioredoxi 97.9 6E-06 2E-10 61.8 3.9 61 97-159 28-89 (118)
162 2oe3_A Thioredoxin-3; electron 97.9 5.4E-06 1.8E-10 62.9 3.7 46 95-142 28-73 (114)
163 2e0q_A Thioredoxin; electron t 97.9 8.5E-06 2.9E-10 59.0 4.5 61 96-158 15-76 (104)
164 2wz9_A Glutaredoxin-3; protein 97.9 7.3E-06 2.5E-10 65.3 4.5 63 97-161 32-95 (153)
165 2dj0_A Thioredoxin-related tra 97.9 3.2E-06 1.1E-10 65.9 2.2 46 97-142 26-71 (137)
166 3d22_A TRXH4, thioredoxin H-ty 97.9 5.7E-06 2E-10 64.3 3.5 52 97-153 46-97 (139)
167 2vlu_A Thioredoxin, thioredoxi 97.9 7.3E-06 2.5E-10 62.0 4.0 57 97-155 34-90 (122)
168 2trx_A Thioredoxin; electron t 97.9 6.7E-06 2.3E-10 60.6 3.6 63 95-158 18-81 (108)
169 2xc2_A Thioredoxinn; oxidoredu 97.9 6.7E-06 2.3E-10 61.9 3.6 57 96-155 32-88 (117)
170 2i1u_A Thioredoxin, TRX, MPT46 97.9 1.2E-05 4E-10 60.5 4.8 63 96-159 29-92 (121)
171 3hz4_A Thioredoxin; NYSGXRC, P 97.9 9.8E-06 3.3E-10 63.5 4.5 64 95-159 22-86 (140)
172 3q6o_A Sulfhydryl oxidase 1; p 97.8 3E-05 1E-09 66.3 7.3 64 96-160 29-98 (244)
173 1qgv_A Spliceosomal protein U5 97.8 3.5E-06 1.2E-10 66.9 1.0 70 96-169 22-95 (142)
174 1zma_A Bacterocin transport ac 97.8 2.3E-05 7.7E-10 59.2 5.1 64 95-161 27-97 (118)
175 3emx_A Thioredoxin; structural 97.8 7.1E-06 2.4E-10 64.0 1.9 61 99-162 33-103 (135)
176 3zzx_A Thioredoxin; oxidoreduc 97.8 1.9E-05 6.6E-10 59.6 4.2 45 96-142 19-63 (105)
177 1v98_A Thioredoxin; oxidoreduc 97.8 2.1E-05 7.3E-10 61.2 4.5 62 96-159 50-112 (140)
178 2o8v_B Thioredoxin 1; disulfid 97.8 8.5E-06 2.9E-10 63.2 2.2 46 95-141 38-83 (128)
179 1r26_A Thioredoxin; redox-acti 97.8 4.1E-05 1.4E-09 59.1 6.1 59 95-155 35-93 (125)
180 3qou_A Protein YBBN; thioredox 97.7 5E-06 1.7E-10 72.5 0.4 62 97-159 26-88 (287)
181 3dxb_A Thioredoxin N-terminall 97.7 8.2E-06 2.8E-10 69.1 1.5 67 95-162 28-95 (222)
182 2l6c_A Thioredoxin; oxidoreduc 97.7 1.4E-05 4.8E-10 59.9 2.4 61 96-158 18-79 (110)
183 1wou_A Thioredoxin -related pr 97.7 3.4E-05 1.2E-09 59.1 4.7 43 97-140 24-73 (123)
184 2lst_A Thioredoxin; structural 96.8 6.1E-06 2.1E-10 63.3 0.0 73 85-161 9-88 (130)
185 3ed3_A Protein disulfide-isome 97.6 6.6E-05 2.2E-09 66.9 6.4 66 96-163 34-103 (298)
186 3apq_A DNAJ homolog subfamily 97.5 6.1E-05 2.1E-09 63.0 4.4 65 96-162 113-178 (210)
187 1a8l_A Protein disulfide oxido 97.5 0.0001 3.4E-09 61.7 4.6 46 96-141 133-181 (226)
188 3gyk_A 27KDA outer membrane pr 97.4 0.00014 4.8E-09 58.6 5.1 49 85-137 12-60 (175)
189 3ira_A Conserved protein; meth 97.4 0.00018 6.2E-09 59.6 5.7 69 96-165 38-118 (173)
190 3qcp_A QSOX from trypanosoma b 97.4 0.00021 7.1E-09 68.1 6.8 64 98-161 43-114 (470)
191 3ph9_A Anterior gradient prote 97.4 5.7E-05 1.9E-09 61.2 2.4 75 97-172 44-122 (151)
192 1mek_A Protein disulfide isome 97.4 4.1E-05 1.4E-09 56.8 1.4 64 95-159 22-89 (120)
193 1fo5_A Thioredoxin; disulfide 97.4 3E-05 1E-09 54.5 0.5 43 98-141 3-45 (85)
194 1wmj_A Thioredoxin H-type; str 97.4 7.9E-06 2.7E-10 62.3 -3.0 57 97-155 36-92 (130)
195 3t58_A Sulfhydryl oxidase 1; o 97.4 0.00015 5E-09 69.8 5.2 65 95-160 28-98 (519)
196 1nho_A Probable thioredoxin; b 97.3 4.7E-05 1.6E-09 53.5 0.7 42 99-141 3-44 (85)
197 2dbc_A PDCL2, unnamed protein 97.3 0.00036 1.2E-08 54.4 5.8 69 97-170 30-99 (135)
198 3idv_A Protein disulfide-isome 97.2 0.00034 1.2E-08 58.6 5.5 67 95-161 145-214 (241)
199 2b5e_A Protein disulfide-isome 97.2 0.00056 1.9E-08 64.5 7.2 65 93-160 27-95 (504)
200 2av4_A Thioredoxin-like protei 97.2 0.00018 6.1E-09 59.1 3.2 45 96-141 40-84 (160)
201 2hls_A Protein disulfide oxido 97.1 0.00076 2.6E-08 58.1 6.8 47 96-142 137-186 (243)
202 2ywm_A Glutaredoxin-like prote 97.0 0.00075 2.6E-08 56.6 5.6 44 96-141 135-178 (229)
203 1eej_A Thiol:disulfide interch 97.0 0.00049 1.7E-08 58.1 4.3 38 96-137 85-122 (216)
204 2es7_A Q8ZP25_salty, putative 97.0 0.0002 6.8E-09 57.0 1.6 75 90-169 27-109 (142)
205 3f8u_A Protein disulfide-isome 97.0 0.0003 1E-08 65.8 2.9 67 96-163 369-437 (481)
206 1ilo_A Conserved hypothetical 97.0 0.0012 4E-08 45.4 5.3 36 101-137 3-38 (77)
207 2r2j_A Thioredoxin domain-cont 96.9 0.0012 4.1E-08 60.2 6.1 57 95-154 20-81 (382)
208 3kp8_A Vkorc1/thioredoxin doma 96.9 0.00025 8.5E-09 53.5 1.3 30 97-126 12-41 (106)
209 1a0r_P Phosducin, MEKA, PP33; 96.9 0.00017 5.8E-09 62.9 0.4 68 97-170 133-204 (245)
210 1sji_A Calsequestrin 2, calseq 96.8 0.0011 3.6E-08 59.7 5.0 61 94-155 25-92 (350)
211 3f8u_A Protein disulfide-isome 96.7 0.0018 6.2E-08 60.4 5.7 52 98-153 22-73 (481)
212 1oaz_A Thioredoxin 1; immune s 96.7 0.00029 1E-08 54.0 0.2 46 95-141 19-78 (123)
213 3uem_A Protein disulfide-isome 96.6 0.0024 8.3E-08 57.2 6.1 46 95-140 265-311 (361)
214 3apo_A DNAJ homolog subfamily 96.6 0.0013 4.5E-08 65.2 4.7 62 96-158 674-736 (780)
215 3apo_A DNAJ homolog subfamily 96.6 0.0026 9E-08 63.1 6.7 64 96-160 454-518 (780)
216 3hd5_A Thiol:disulfide interch 96.6 0.0056 1.9E-07 50.1 7.3 43 96-139 24-66 (195)
217 3ga4_A Dolichyl-diphosphooligo 96.5 0.0082 2.8E-07 49.8 7.9 63 98-160 38-113 (178)
218 2qgv_A Hydrogenase-1 operon pr 96.5 0.0018 6.3E-08 51.9 3.6 56 96-155 34-94 (140)
219 2trc_P Phosducin, MEKA, PP33; 96.4 0.00078 2.7E-08 57.4 1.1 40 98-139 121-160 (217)
220 3iv4_A Putative oxidoreductase 96.4 0.008 2.7E-07 46.4 6.7 32 93-124 20-51 (112)
221 2e7p_A Glutaredoxin; thioredox 96.4 0.0023 7.8E-08 47.7 3.5 52 95-153 18-71 (116)
222 3evi_A Phosducin-like protein 96.4 0.0054 1.8E-07 47.2 5.6 40 99-140 25-64 (118)
223 2qsi_A Putative hydrogenase ex 96.3 0.0072 2.4E-07 48.2 6.4 58 97-155 33-92 (137)
224 2k8s_A Thioredoxin; dimer, str 96.3 0.0047 1.6E-07 43.3 4.6 36 101-139 4-39 (80)
225 2b5e_A Protein disulfide-isome 96.3 0.0028 9.6E-08 59.6 4.1 61 96-158 375-438 (504)
226 3h93_A Thiol:disulfide interch 96.3 0.0099 3.4E-07 48.4 7.0 41 96-137 24-64 (192)
227 1h75_A Glutaredoxin-like prote 96.2 0.013 4.5E-07 40.7 6.5 47 101-154 3-49 (81)
228 1a8l_A Protein disulfide oxido 96.1 0.0095 3.3E-07 49.4 6.4 57 96-155 21-81 (226)
229 2ywm_A Glutaredoxin-like prote 96.1 0.0058 2E-07 51.0 4.8 46 96-141 20-70 (229)
230 1ego_A Glutaredoxin; electron 96.0 0.0059 2E-07 42.8 3.9 50 101-152 3-53 (85)
231 1wjk_A C330018D20RIK protein; 96.0 0.0087 3E-07 44.3 4.8 69 85-160 4-74 (100)
232 1r7h_A NRDH-redoxin; thioredox 95.7 0.032 1.1E-06 37.8 6.6 47 101-154 3-49 (75)
233 3us3_A Calsequestrin-1; calciu 95.7 0.019 6.5E-07 52.1 6.8 65 95-159 28-100 (367)
234 1z6m_A Conserved hypothetical 95.5 0.03 1E-06 44.7 6.8 49 88-138 20-69 (175)
235 1t3b_A Thiol:disulfide interch 95.4 0.016 5.3E-07 48.6 4.8 37 96-136 85-121 (211)
236 2fgx_A Putative thioredoxin; N 95.1 0.023 7.7E-07 43.3 4.5 39 99-140 30-68 (107)
237 2znm_A Thiol:disulfide interch 95.1 0.015 5E-07 47.3 3.6 42 96-138 21-62 (195)
238 2dlx_A UBX domain-containing p 95.0 0.088 3E-06 42.3 7.9 63 97-161 42-111 (153)
239 2rem_A Disulfide oxidoreductas 94.8 0.069 2.3E-06 43.1 7.0 41 96-137 24-64 (193)
240 2klx_A Glutaredoxin; thioredox 94.6 0.12 4E-06 36.6 7.0 43 101-151 8-50 (89)
241 1pn0_A Phenol 2-monooxygenase; 94.3 0.42 1.4E-05 46.8 12.5 73 68-140 478-566 (665)
242 3dml_A Putative uncharacterize 94.3 0.023 7.8E-07 43.9 2.6 28 97-124 18-45 (116)
243 1hyu_A AHPF, alkyl hydroperoxi 94.3 0.054 1.8E-06 51.4 5.8 44 96-141 116-159 (521)
244 1kte_A Thioltransferase; redox 94.1 0.055 1.9E-06 39.4 4.4 22 101-122 14-35 (105)
245 1v58_A Thiol:disulfide interch 93.9 0.075 2.6E-06 45.3 5.6 46 87-137 89-134 (241)
246 3l78_A Regulatory protein SPX; 93.9 0.14 4.7E-06 39.3 6.5 65 101-172 2-71 (120)
247 3c1r_A Glutaredoxin-1; oxidize 93.8 0.12 4.1E-06 39.2 5.9 54 101-161 27-91 (118)
248 1fov_A Glutaredoxin 3, GRX3; a 93.6 0.2 6.8E-06 34.3 6.4 45 102-153 4-49 (82)
249 2hze_A Glutaredoxin-1; thiored 93.5 0.12 4.2E-06 38.6 5.5 52 101-159 21-82 (114)
250 1wik_A Thioredoxin-like protei 93.5 0.27 9.3E-06 36.4 7.4 61 93-161 11-79 (109)
251 3hz8_A Thiol:disulfide interch 93.4 0.078 2.7E-06 43.5 4.6 42 96-138 23-64 (193)
252 3gkx_A Putative ARSC family re 93.4 0.1 3.5E-06 40.2 4.9 65 101-172 6-75 (120)
253 2yan_A Glutaredoxin-3; oxidore 93.4 0.21 7.2E-06 36.7 6.5 57 95-159 15-79 (105)
254 3fz4_A Putative arsenate reduc 93.3 0.15 5E-06 39.2 5.8 66 100-172 4-74 (120)
255 2khp_A Glutaredoxin; thioredox 93.3 0.3 1E-05 34.5 7.0 45 101-152 8-53 (92)
256 3rdw_A Putative arsenate reduc 93.1 0.17 5.7E-06 39.0 5.7 65 101-172 7-77 (121)
257 3f0i_A Arsenate reductase; str 93.0 0.18 6E-06 38.7 5.7 65 101-172 6-76 (119)
258 1ttz_A Conserved hypothetical 92.9 0.077 2.6E-06 38.4 3.3 23 101-123 3-25 (87)
259 3qmx_A Glutaredoxin A, glutare 92.8 0.28 9.7E-06 36.0 6.5 54 100-160 17-75 (99)
260 3uem_A Protein disulfide-isome 92.7 0.19 6.6E-06 44.6 6.4 42 97-139 135-176 (361)
261 2cq9_A GLRX2 protein, glutared 92.6 0.3 1E-05 37.5 6.6 49 104-159 32-87 (130)
262 3l9v_A Putative thiol-disulfid 92.5 0.078 2.7E-06 43.4 3.4 42 96-139 14-58 (189)
263 3rhb_A ATGRXC5, glutaredoxin-C 92.3 0.3 1E-05 36.1 6.2 22 101-122 21-42 (113)
264 1z3e_A Regulatory protein SPX; 92.1 0.29 9.8E-06 38.0 6.0 65 101-172 3-72 (132)
265 1s3c_A Arsenate reductase; ARS 92.1 0.24 8.2E-06 39.2 5.5 66 101-173 4-74 (141)
266 3msz_A Glutaredoxin 1; alpha-b 92.0 0.44 1.5E-05 33.0 6.4 46 101-153 6-54 (89)
267 2dkh_A 3-hydroxybenzoate hydro 92.0 0.32 1.1E-05 47.2 7.4 35 69-103 467-504 (639)
268 2djk_A PDI, protein disulfide- 91.7 0.098 3.3E-06 40.1 2.8 61 97-159 23-86 (133)
269 3ic4_A Glutaredoxin (GRX-1); s 91.6 0.41 1.4E-05 33.7 6.0 48 101-153 14-65 (92)
270 3ctg_A Glutaredoxin-2; reduced 91.5 0.35 1.2E-05 37.3 5.9 54 101-161 39-103 (129)
271 2ht9_A Glutaredoxin-2; thiored 91.2 0.43 1.5E-05 37.7 6.2 49 104-159 54-109 (146)
272 2wci_A Glutaredoxin-4; redox-a 91.0 0.55 1.9E-05 36.8 6.5 55 100-161 37-99 (135)
273 3nzn_A Glutaredoxin; structura 90.8 0.4 1.4E-05 35.0 5.4 22 101-122 24-45 (103)
274 1un2_A DSBA, thiol-disulfide i 90.8 0.061 2.1E-06 44.8 0.8 41 98-139 114-157 (197)
275 3ihg_A RDME; flavoenzyme, anth 90.7 0.82 2.8E-05 42.9 8.7 36 66-102 417-452 (535)
276 1aba_A Glutaredoxin; electron 90.7 1.1 3.7E-05 31.5 7.4 47 101-154 2-58 (87)
277 3h8q_A Thioredoxin reductase 3 89.8 1 3.5E-05 33.5 7.0 50 104-160 22-78 (114)
278 3kp9_A Vkorc1/thioredoxin doma 89.6 0.088 3E-06 46.9 0.9 26 101-126 201-226 (291)
279 2lqo_A Putative glutaredoxin R 89.0 0.77 2.6E-05 33.5 5.6 43 101-150 6-49 (92)
280 2wem_A Glutaredoxin-related pr 88.6 1.2 4.1E-05 33.9 6.7 56 99-161 21-85 (118)
281 3gx8_A Monothiol glutaredoxin- 88.5 1.5 5E-05 33.4 7.1 56 99-161 17-83 (121)
282 2ct6_A SH3 domain-binding glut 88.1 1.4 4.7E-05 32.9 6.6 49 101-150 10-59 (111)
283 2hls_A Protein disulfide oxido 87.6 0.67 2.3E-05 39.3 5.1 45 96-141 25-75 (243)
284 3gv1_A Disulfide interchange p 87.5 0.66 2.2E-05 36.7 4.7 36 95-136 12-47 (147)
285 3ipz_A Monothiol glutaredoxin- 87.1 1.3 4.4E-05 32.8 5.9 56 99-161 19-82 (109)
286 1rw1_A Conserved hypothetical 86.7 0.65 2.2E-05 35.0 4.0 64 101-172 2-69 (114)
287 3feu_A Putative lipoprotein; a 86.3 0.36 1.2E-05 39.3 2.5 29 97-126 23-51 (185)
288 2kok_A Arsenate reductase; bru 85.8 1.4 4.8E-05 33.4 5.6 64 101-172 7-74 (120)
289 2qc7_A ERP31, ERP28, endoplasm 85.7 0.37 1.3E-05 41.4 2.4 42 95-140 20-64 (240)
290 1t1v_A SH3BGRL3, SH3 domain-bi 84.7 2.3 7.8E-05 30.2 6.0 54 102-161 5-69 (93)
291 3l9s_A Thiol:disulfide interch 84.7 0.89 3E-05 37.2 4.2 38 99-137 23-63 (191)
292 3zyw_A Glutaredoxin-3; metal b 84.0 1.9 6.7E-05 32.1 5.6 60 94-161 13-80 (111)
293 2c0g_A ERP29 homolog, windbeut 83.8 2.5 8.6E-05 36.4 6.9 42 95-140 31-76 (248)
294 3gn3_A Putative protein-disulf 81.5 1.2 4.1E-05 36.3 3.8 43 95-137 12-54 (182)
295 3c7m_A Thiol:disulfide interch 79.0 3.3 0.00011 32.8 5.6 39 98-138 19-58 (195)
296 3bci_A Disulfide bond protein 77.7 3.2 0.00011 33.0 5.1 42 96-137 10-53 (186)
297 2ec4_A FAS-associated factor 1 76.6 7.9 0.00027 31.4 7.3 68 95-162 53-141 (178)
298 4dvc_A Thiol:disulfide interch 76.4 4.2 0.00014 31.7 5.4 39 96-136 21-59 (184)
299 3tdg_A DSBG, putative uncharac 74.9 3.6 0.00012 36.1 5.0 40 97-139 147-186 (273)
300 2wul_A Glutaredoxin related pr 72.3 11 0.00037 28.7 6.6 56 99-161 21-85 (118)
301 1nm3_A Protein HI0572; hybrid, 70.2 5.8 0.0002 32.9 5.1 21 101-121 172-192 (241)
302 3l4n_A Monothiol glutaredoxin- 66.9 4.3 0.00015 31.2 3.3 63 95-161 12-79 (127)
303 3gha_A Disulfide bond formatio 66.6 7.4 0.00025 31.8 4.9 43 96-138 28-72 (202)
304 1u6t_A SH3 domain-binding glut 66.4 18 0.00063 27.6 6.8 46 100-151 1-52 (121)
305 3gmf_A Protein-disulfide isome 65.8 8.7 0.0003 31.6 5.2 48 88-137 8-57 (205)
306 2l57_A Uncharacterized protein 65.0 24 0.00083 25.4 7.2 30 214-249 83-112 (126)
307 3f4s_A Alpha-DSBA1, putative u 64.3 9.5 0.00032 31.9 5.3 42 96-137 38-81 (226)
308 2in3_A Hypothetical protein; D 61.0 30 0.001 27.6 7.7 39 98-137 7-45 (216)
309 4f9z_D Endoplasmic reticulum r 56.7 29 0.00098 28.3 6.9 43 97-140 131-173 (227)
310 3j21_Z 50S ribosomal protein L 54.7 23 0.0008 25.6 5.3 51 123-173 24-79 (99)
311 3v7e_A Ribosome-associated pro 54.3 34 0.0012 23.9 6.0 51 123-173 20-74 (82)
312 3umv_A Deoxyribodipyrimidine p 53.2 48 0.0016 31.3 8.6 47 114-161 92-138 (506)
313 1w41_A 50S ribosomal protein L 53.0 30 0.001 25.1 5.7 51 123-173 25-80 (101)
314 3ghf_A Septum site-determining 52.3 17 0.00057 27.6 4.3 39 117-155 61-99 (120)
315 2l69_A Rossmann 2X3 fold prote 48.7 66 0.0023 23.8 6.9 52 117-168 36-93 (134)
316 4gxt_A A conserved functionall 47.7 13 0.00046 33.7 3.7 38 117-154 224-261 (385)
317 2xry_A Deoxyribodipyrimidine p 47.2 69 0.0024 29.6 8.6 59 114-172 89-156 (482)
318 2axo_A Hypothetical protein AT 46.5 65 0.0022 28.0 7.7 37 98-137 43-79 (270)
319 2xzm_U Ribosomal protein L7AE 44.6 66 0.0022 24.5 6.7 48 123-170 33-85 (126)
320 4as2_A Phosphorylcholine phosp 44.2 16 0.00055 32.5 3.5 38 117-154 146-187 (327)
321 3kzq_A Putative uncharacterize 43.5 46 0.0016 26.6 6.0 37 100-137 4-40 (208)
322 3ira_A Conserved protein; meth 42.0 98 0.0034 24.6 7.7 36 214-250 105-143 (173)
323 3fvv_A Uncharacterized protein 40.6 51 0.0017 26.0 5.8 39 117-155 95-133 (232)
324 2j07_A Deoxyribodipyrimidine p 40.5 46 0.0016 30.4 6.1 59 114-172 49-116 (420)
325 3on1_A BH2414 protein; structu 40.0 68 0.0023 23.1 5.9 49 123-171 27-79 (101)
326 2wq7_A RE11660P; lyase-DNA com 38.9 60 0.002 30.8 6.8 46 114-159 86-131 (543)
327 2jad_A Yellow fluorescent prot 38.4 66 0.0023 29.2 6.7 18 100-118 263-280 (362)
328 3u5e_c L32, RP73, YL38, 60S ri 37.0 48 0.0016 24.2 4.7 51 123-173 31-86 (105)
329 2ale_A SNU13, NHP2/L7AE family 37.0 64 0.0022 24.8 5.6 51 123-173 41-96 (134)
330 3cpq_A 50S ribosomal protein L 35.8 59 0.002 23.9 5.0 51 123-173 30-85 (110)
331 2gjf_A Designed protein; proca 35.6 42 0.0014 22.8 3.9 27 133-159 50-77 (78)
332 4a18_G RPL30; ribosome, eukary 35.6 63 0.0021 23.5 5.1 51 123-173 31-86 (104)
333 2fpr_A Histidine biosynthesis 35.3 40 0.0014 26.2 4.3 39 117-155 45-98 (176)
334 1owl_A Photolyase, deoxyribodi 34.8 55 0.0019 30.4 5.8 47 115-161 55-101 (484)
335 2p9j_A Hypothetical protein AQ 34.3 61 0.0021 24.3 5.1 36 120-155 42-77 (162)
336 1np7_A DNA photolyase; protein 32.8 56 0.0019 30.4 5.4 47 114-160 62-108 (489)
337 3hug_B Probable conserved memb 32.3 22 0.00076 26.7 2.1 23 107-129 52-74 (108)
338 3ibs_A Conserved hypothetical 31.7 1.1E+02 0.0036 24.2 6.4 22 119-140 128-149 (218)
339 2kg4_A Growth arrest and DNA-d 31.5 44 0.0015 27.0 3.9 44 127-170 50-104 (165)
340 3v7q_A Probable ribosomal prot 31.0 1.2E+02 0.004 21.8 5.9 50 123-172 28-81 (101)
341 2j4d_A Cryptochrome 3, cryptoc 30.6 65 0.0022 30.4 5.5 46 114-159 97-142 (525)
342 2gmw_A D,D-heptose 1,7-bisphos 30.5 70 0.0024 25.4 5.1 39 117-155 53-106 (211)
343 2lbw_A H/ACA ribonucleoprotein 30.3 1.1E+02 0.0039 22.7 5.9 50 123-172 29-83 (121)
344 2aif_A Ribosomal protein L7A; 30.0 1.4E+02 0.0048 22.8 6.5 51 124-174 51-106 (135)
345 3iz5_f 60S ribosomal protein L 29.9 79 0.0027 23.5 4.9 51 123-173 35-90 (112)
346 4e6z_A Apicoplast TIC22, putat 29.9 34 0.0012 29.9 3.2 66 67-142 69-139 (279)
347 4ev1_A Anabena TIC22; TIC22 fo 28.9 59 0.002 28.0 4.5 84 70-160 9-110 (252)
348 2x8g_A Thioredoxin glutathione 28.9 69 0.0024 30.1 5.4 18 104-121 23-40 (598)
349 3a1c_A Probable copper-exporti 28.4 64 0.0022 27.1 4.7 33 122-154 171-203 (287)
350 3fy4_A 6-4 photolyase; DNA rep 26.9 56 0.0019 31.1 4.4 47 115-161 66-112 (537)
351 3pe6_A Monoglyceride lipase; a 26.8 1.1E+02 0.0037 24.1 5.6 55 79-138 21-77 (303)
352 3dex_A SAV_2001; alpha-beta pr 26.8 22 0.00077 26.7 1.2 33 214-250 53-85 (107)
353 1dnp_A DNA photolyase; DNA rep 26.7 59 0.002 30.2 4.4 47 115-161 54-104 (471)
354 1l6r_A Hypothetical protein TA 26.6 1.4E+02 0.0047 24.1 6.3 37 119-155 27-63 (227)
355 1u3d_A Cryptochrome 1 apoprote 26.2 1E+02 0.0036 28.7 6.1 45 115-159 63-108 (509)
356 3e58_A Putative beta-phosphogl 26.1 85 0.0029 23.7 4.7 36 119-154 94-129 (214)
357 4had_A Probable oxidoreductase 25.9 84 0.0029 27.1 5.1 32 129-160 47-78 (350)
358 3o85_A Ribosomal protein L7AE; 25.8 99 0.0034 23.2 4.8 52 123-174 40-96 (122)
359 2obb_A Hypothetical protein; s 25.5 90 0.0031 24.1 4.7 41 119-159 29-73 (142)
360 1xbi_A 50S ribosomal protein L 25.5 1.2E+02 0.0042 22.5 5.3 50 123-172 38-92 (120)
361 1nnl_A L-3-phosphoserine phosp 25.4 53 0.0018 25.8 3.4 35 120-154 92-126 (225)
362 2pib_A Phosphorylated carbohyd 25.1 89 0.003 23.6 4.6 34 121-154 91-124 (216)
363 2wm8_A MDP-1, magnesium-depend 24.9 68 0.0023 24.8 3.9 38 117-154 71-109 (187)
364 1k1e_A Deoxy-D-mannose-octulos 24.6 1.2E+02 0.004 23.3 5.3 35 121-155 42-76 (180)
365 3mmz_A Putative HAD family hyd 24.4 88 0.003 24.2 4.5 65 77-154 13-79 (176)
366 2q1z_B Anti-sigma factor CHRR, 24.2 42 0.0014 27.3 2.6 21 107-127 33-53 (195)
367 3e8m_A Acylneuraminate cytidyl 24.2 69 0.0024 24.0 3.8 34 122-155 39-72 (164)
368 2e0i_A 432AA long hypothetical 24.2 1.3E+02 0.0045 27.6 6.3 45 115-161 54-98 (440)
369 2r8e_A 3-deoxy-D-manno-octulos 24.0 91 0.0031 24.3 4.6 34 122-155 61-94 (188)
370 1vjq_A Designed protein; struc 23.9 63 0.0022 21.9 3.1 27 133-159 42-69 (79)
371 3n1u_A Hydrolase, HAD superfam 23.7 1E+02 0.0035 24.2 4.8 33 123-155 55-87 (191)
372 1rlg_A 50S ribosomal protein L 23.4 1.5E+02 0.005 22.0 5.4 49 124-172 37-90 (119)
373 2fc3_A 50S ribosomal protein L 23.0 1.3E+02 0.0045 22.4 5.1 50 123-172 37-91 (124)
374 4fb5_A Probable oxidoreductase 22.7 76 0.0026 27.5 4.2 52 108-159 32-85 (393)
375 1vq8_F 50S ribosomal protein L 22.6 1.3E+02 0.0046 22.2 5.0 50 123-172 38-92 (120)
376 2pr7_A Haloacid dehalogenase/e 22.6 46 0.0016 23.7 2.3 38 115-152 19-56 (137)
377 3ib6_A Uncharacterized protein 22.6 88 0.003 24.2 4.2 38 117-154 37-77 (189)
378 3hju_A Monoglyceride lipase; a 22.6 1.5E+02 0.0051 24.3 5.9 60 74-138 33-95 (342)
379 3n07_A 3-deoxy-D-manno-octulos 22.2 82 0.0028 25.2 4.0 33 123-155 61-93 (195)
380 3m9l_A Hydrolase, haloacid deh 22.1 1.1E+02 0.0037 23.5 4.6 32 122-153 78-109 (205)
381 2jya_A AGR_C_3324P, uncharacte 21.3 66 0.0023 24.1 2.9 25 134-158 54-79 (106)
382 2o2x_A Hypothetical protein; s 20.8 72 0.0025 25.4 3.4 38 118-155 60-112 (218)
383 2hi0_A Putative phosphoglycola 20.8 1.9E+02 0.0066 22.8 6.1 35 120-154 116-150 (240)
384 2nyv_A Pgpase, PGP, phosphogly 20.5 1.2E+02 0.0041 23.8 4.6 35 120-154 89-123 (222)
385 3av3_A Phosphoribosylglycinami 20.5 2.1E+02 0.0072 23.3 6.3 31 130-160 30-61 (212)
386 3um9_A Haloacid dehalogenase, 20.4 1.3E+02 0.0043 23.2 4.7 35 120-154 102-136 (230)
387 4hde_A SCO1/SENC family lipopr 20.4 45 0.0015 25.9 1.9 39 77-124 24-63 (170)
388 3s6j_A Hydrolase, haloacid deh 20.0 96 0.0033 23.9 3.9 34 121-154 98-131 (233)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=9.4e-31 Score=214.19 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=129.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
-.++|++||+|+|.|.+|+.++|+++ +++++||.|+|+.|||+|+.|+++|++.++++++.|+.+|+|+.|+++.+++|
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~ 81 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAF 81 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHH
Confidence 36899999999999999999999998 56778888888999999999999999999999999999999999999999999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
+++++++| +++|++++++++||+..... + +.+.....+++||||++ |+
T Consensus 82 ~~~~~~~~p~l~D~~~~v~~~ygv~~~~~-----------------~-------------~~~~~~~~p~tflID~~-G~ 130 (157)
T 4g2e_A 82 KEHNKLNFTILSDYNREVVKKYNVAWEFP-----------------A-------------LPGYVLAKRAVFVIDKE-GK 130 (157)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEECT-----------------T-------------STTCEEECEEEEEECTT-SB
T ss_pred HHHcCCcEEEEEcCCcHHHHHcCCccccc-----------------c-------------CCCcceeeeeEEEECCC-CE
Confidence 99999999 99999999999999876421 0 01122457899999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhhC
Q 025522 227 ISYIHRDKEAGDDPDIQDILKACCS 251 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al~~ 251 (251)
|+|.|++.++.+++++++|++++++
T Consensus 131 I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 131 VRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999998863
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=2.5e-31 Score=219.67 Aligned_cols=150 Identities=12% Similarity=0.205 Sum_probs=134.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCcc-CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~-~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
.++|++||+|+|.|.+|+.++|+++. +++++||+|||+.|||+|+.|+++|++.+++|++.|+.+|+|+.|+++.+++|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 84 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKF 84 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHH
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHH
Confidence 58999999999999999999999986 45678999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
+++++++| +++|++++++++||+..... .+. .....+++||||++ |+
T Consensus 85 ~~~~~~~fp~l~D~~~~v~~~ygv~~~~~----------------~~~---------------~~~~~p~tflID~~-G~ 132 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNREVIKLYNVYHEDL----------------KGL---------------KMVAKRAVFIVKPD-GT 132 (164)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEEEE----------------TTE---------------EEEECCEEEEECTT-SB
T ss_pred HHhcCcccceeecCchHHHHHcCCccccc----------------ccC---------------cCCeeeEEEEECCC-CE
Confidence 99999999 99999999999999864311 000 01346799999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 227 ISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|.|+..++.++++++++|++++
T Consensus 133 I~~~~~~~~~~~~~~~~eil~~l~ 156 (164)
T 4gqc_A 133 VAYKWVTDNPLNEPDYDEVVREAN 156 (164)
T ss_dssp EEEEEECSCTTCCCCHHHHHHHHH
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999875
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.95 E-value=1.4e-27 Score=199.74 Aligned_cols=154 Identities=14% Similarity=0.147 Sum_probs=131.9
Q ss_pred CCCccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEccCCChhhH-HHHHHHHHcHHHHHHcCCEEEE-EeCCCHH
Q 025522 66 SVSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVE 142 (251)
Q Consensus 66 ~~~~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~gv~vVa-Vs~~~~~ 142 (251)
.++.++|+.||+|++. |.+|+.++|+++++++++||+|||+.|||.|+ +|+++|++.+++|+++|+.||+ |+.++.+
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~ 91 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAF 91 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHH
Confidence 3557899999999999 99999999999777888999999999999999 5999999999999999999997 9999999
Q ss_pred HHHHHHHHhCCc--e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 143 QARTFSEQTKFK--G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 143 ~~~~f~~~~~~p--f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
.+++|+++++++ | +++|++.++.++||+..... .... . | +....+++||
T Consensus 92 ~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~-------~~~~----~------------g-----~~~~~r~tfv 143 (173)
T 3mng_A 92 VTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDS-------LVSI----F------------G-----NRRLKRFSMV 143 (173)
T ss_dssp HHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCST-------THHH----H------------S-----SCCBCCEEEE
T ss_pred HHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccc-------cccc----c------------C-----CcceEEEEEE
Confidence 999999999998 9 99999999999999875411 0000 0 0 1135679999
Q ss_pred EcCCCCeEEEEEeCCCC--CCCCCHHHHHHHh
Q 025522 220 AGPGKSNISYIHRDKEA--GDDPDIQDILKAC 249 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~--~D~~~~~eIL~al 249 (251)
|| + |+|+|.+++.++ ++..++++||++|
T Consensus 144 ID-d-G~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 144 VQ-D-GIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp EE-T-TEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred EE-C-CEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 99 8 699999999775 4668899999875
No 4
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.95 E-value=5.2e-27 Score=198.17 Aligned_cols=151 Identities=11% Similarity=0.119 Sum_probs=131.4
Q ss_pred CCccccCCCCCcEEecC--CC-CeEeCCCccCCCcEEEEEEccCCChhhHH-HHHHHHHcHHHHHHcCCE-EEEEeCCCH
Q 025522 67 VSEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSV 141 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~--~G-~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~gv~-vVaVs~~~~ 141 (251)
...++|+.+|+|++.+. +| +.++|+++++++++||+|||+.|||+|+. |+++|++++++|+++|+. ||+|+.+++
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 34799999999999998 99 99999996677889999999999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHhCCc--e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEE
Q 025522 142 EQARTFSEQTKFK--G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 218 (251)
Q Consensus 142 ~~~~~f~~~~~~p--f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 218 (251)
+.+++|+++++++ | +++|++.++.++||+..... . .|+ +....+++|
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~-----~----------~g~---------------g~~~~r~tf 153 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLS-----A----------GTL---------------GIRSKRYSM 153 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEG-----G----------GTC---------------EEEECCEEE
T ss_pred HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceecc-----c----------cCC---------------cccceeEEE
Confidence 9999999999999 9 99999999999999876421 0 010 012357899
Q ss_pred EEcCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025522 219 VAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 249 (251)
Q Consensus 219 Vid~ggg~I~~~h~~~~~~D--~~~~~eIL~al 249 (251)
||+ + |+|+|.|++.++++ .++++++|+.+
T Consensus 154 iId-d-G~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 154 LVE-D-GVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp EEE-T-TEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred EEC-C-CEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 997 6 69999999987755 89999999874
No 5
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=2e-25 Score=182.96 Aligned_cols=144 Identities=13% Similarity=0.163 Sum_probs=128.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
..++|+.+|+|++.|.+|+.++++++ +++++||.|+++.||++|+.++++|++++++ .|+.||+|+.|+.+.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 46789999999999999999999998 5677888888899999999999999999877 8999999999999999999
Q ss_pred HHHhCC-ce-EEEcC-ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 148 SEQTKF-KG-VYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 148 ~~~~~~-pf-l~sDp-~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
++++++ +| +++|+ +.+++++||+.... .+...+.+||||++
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~- 138 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVMEE-----------------------------------LRLLARAVFVLDAD- 138 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEETT-----------------------------------TTEECCEEEEECTT-
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEECCC-
Confidence 999999 89 99999 99999999986521 01235789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhhC
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKACCS 251 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al~~ 251 (251)
|+|+|.|+..+..++++++++++++++
T Consensus 139 G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 139 NKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 699999999999999999999999864
No 6
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.93 E-value=1.6e-25 Score=183.45 Aligned_cols=148 Identities=16% Similarity=0.168 Sum_probs=127.3
Q ss_pred ccccCCCCCcEEe--cCCC--CeEeCCCccCCCcEEEEEEccCCChhhH-HHHHHHHHcHHHHHHcCCE-EEEEeCCCHH
Q 025522 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (251)
Q Consensus 69 ~~~g~~ap~f~l~--d~~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~gv~-vVaVs~~~~~ 142 (251)
.++|+.+|+|++. |.+| +.++|+++++++++||.|+++.|||.|+ .|+++|++++++|++.|++ ||+|+.++.+
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 8999 9999999557778888888899999999 8999999999999999999 9999999999
Q ss_pred HHHHHHHHhCC--ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 143 QARTFSEQTKF--KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 143 ~~~~f~~~~~~--pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
.+++|++++++ +| +++|++.+++++||+..... +. |+ +....+++||
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~~-----------g~---------------~~~~~p~~~v 133 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQ----EK-----------GL---------------GTRSRRFALL 133 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEET----TT-----------TS---------------EEEECCEEEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccc----cC-----------CC---------------CccceeEEEE
Confidence 99999999999 89 99999999999999875311 00 10 0124678999
Q ss_pred EcCCCCeEEEEEeCCCCCCCC--CHHHHHHHh
Q 025522 220 AGPGKSNISYIHRDKEAGDDP--DIQDILKAC 249 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~~D~~--~~~eIL~al 249 (251)
|| + |+|+|.|++. +++++ ++++||+++
T Consensus 134 id-~-G~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 134 VD-D-LKVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp EE-T-TEEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred EE-C-CEEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 99 8 6999999998 88887 899999764
No 7
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.93 E-value=6.8e-25 Score=179.27 Aligned_cols=144 Identities=8% Similarity=0.148 Sum_probs=125.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
..+.|+.+|+|++.|.+|+.++++++ +++++||.|+++.||++|+.+++.|+++++++ .|+++|+|+.|+.+.+++|
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 36789999999999999999999998 45555555555799999999999999999988 8999999999999999999
Q ss_pred HHHhCC-ce-EEEc-CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 148 SEQTKF-KG-VYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 148 ~~~~~~-pf-l~sD-p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
++++++ +| +++| ++.+++++||+.... .+...+.+||||++
T Consensus 92 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~-----------------------------------~g~~~p~~~liD~~- 135 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFDHSFGRDYALLINE-----------------------------------WHLLARAVFVLDTD- 135 (163)
T ss_dssp HHHHTCTTSEEEECTTTCHHHHHHTCBCTT-----------------------------------TCSBCCEEEEECTT-
T ss_pred HHhcCCCCcEEecCCchhHHHHHhCCcccc-----------------------------------CCceEEEEEEEcCC-
Confidence 999999 99 9999 899999999976421 01235689999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|++.|.+.+..++++.++++++++
T Consensus 136 G~i~~~~~g~~~~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 136 NTIRYVEYVDNINSEPNFEAAIAAAK 161 (163)
T ss_dssp CBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred CeEEEEEecCCcCCCCCHHHHHHHHH
Confidence 69999999999999999999999886
No 8
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.93 E-value=8.1e-25 Score=181.39 Aligned_cols=149 Identities=11% Similarity=0.118 Sum_probs=127.5
Q ss_pred ccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEccCCChhhHH-HHHHHHHcHHHHHHcCC-EEEEEeCCCHHHHH
Q 025522 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (251)
Q Consensus 69 ~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~gv-~vVaVs~~~~~~~~ 145 (251)
.++|+.+|+|++. |.+|+.++|+++++++++||+|||+.|||+|+. |+++|++++++|++.|+ +||+|+.++.+.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5789999999999 999999999998777889999999999999999 99999999999999999 99999999999999
Q ss_pred HHHHHhCCc--e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 146 TFSEQTKFK--G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 146 ~f~~~~~~p--f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
+|+++++++ | +++|++.+++++||+..... . . .| .....+.+||| +
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~-----~----~-----~g----------------~~~~~p~t~lI-~ 131 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMELDLS-----A----V-----LG----------------NVRSKRYSLVI-E 131 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH-----H----H-----HS----------------SCEECCEEEEE-E
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCccccc-----c----c-----cC----------------cccceEEEEEE-e
Confidence 999999999 9 99999999999999875310 0 0 01 01245789999 8
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHh
Q 025522 223 GKSNISYIHRDKEAG--DDPDIQDILKAC 249 (251)
Q Consensus 223 ggg~I~~~h~~~~~~--D~~~~~eIL~al 249 (251)
+ |+|+|.+++.+.. +-...+.+|+.+
T Consensus 132 ~-G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 132 D-GVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp T-TEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred C-CEEEEEEecCCCCcceeccHHHHHHHh
Confidence 7 6999999987654 346677887765
No 9
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.93 E-value=8.2e-25 Score=177.55 Aligned_cols=154 Identities=12% Similarity=0.065 Sum_probs=126.2
Q ss_pred CCCCCccccCCCCCcE--EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 64 PPSVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 64 ~~~~~~~~g~~ap~f~--l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
+.+....+|+.+|+|+ +.|.+|+.++++++ +++++||.|+++.|||.|+.+++.|+++++++++.|++||+|+.|+.
T Consensus 2 ~~m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 80 (163)
T 3gkn_A 2 NAMTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV 80 (163)
T ss_dssp --CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CcccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4556688999999999 99999999999998 45566666666699999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 142 EQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 142 ~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
+.+++|+++++++| +++|++.+++++||+...... . | .... -..+.+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~----~-----------~------~~~~--------~~~p~~~li 131 (163)
T 3gkn_A 81 KSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNM----Y-----------G------KQVL--------GIERSTFLL 131 (163)
T ss_dssp HHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEE----T-----------T------EEEE--------EECCEEEEE
T ss_pred HHHHHHHHHhCCCceEEECCcHHHHHHhCCcccccc----c-----------c------cccc--------CcceEEEEE
Confidence 99999999999999 999999999999998763210 0 0 0000 026789999
Q ss_pred cCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 221 GPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 221 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|++ |+|++.|.+ ......+++++++++
T Consensus 132 d~~-G~i~~~~~~--~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 132 SPE-GQVVQAWRK--VKVAGHADAVLAALK 158 (163)
T ss_dssp CTT-SCEEEEECS--CCSTTHHHHHHHHHH
T ss_pred CCC-CeEEEEEcC--CCcccCHHHHHHHHH
Confidence 998 699999944 444566788888774
No 10
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.93 E-value=8e-25 Score=179.93 Aligned_cols=146 Identities=12% Similarity=0.168 Sum_probs=126.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
..+.|+.+|+|++.|.+|+.++++++ +++++||.|+++.|||+|+.++++|+++++++ .|+++|+|+.|+.+.+++|
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 35789999999999999999999998 45666666667999999999999999999988 8999999999999999999
Q ss_pred HHHhCC-ce-EEEc-CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 148 SEQTKF-KG-VYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 148 ~~~~~~-pf-l~sD-p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
++++++ +| +++| ++.++ ++||+..... + ..+...|.+||+|++
T Consensus 97 ~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~----~----------------------------~~g~~~p~~~liD~~- 142 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRYRDM-EKYGVLIGEG----A----------------------------LKGILARAVFIIDKE- 142 (171)
T ss_dssp HHHTTCCSSEEEECTTTCGG-GGGTCBBCSS----T----------------------------TTTSBCCEEEEECTT-
T ss_pred HHHcCCCCeEEeecCccCcH-HHhCCEeccc----c----------------------------cCCceeeEEEEEcCC-
Confidence 999999 89 9999 89999 9999865310 0 001236789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|++.|.+.+..++++.++++++++
T Consensus 143 G~i~~~~~~~~~~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 143 GKVAYVQLVPEITEEPNYDEVVNKVK 168 (171)
T ss_dssp SBEEEEEECSBTTSCCCCHHHHHHHH
T ss_pred CeEEEEEeCCCcCCCCCHHHHHHHHH
Confidence 69999999988899999999999886
No 11
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=5.7e-25 Score=182.64 Aligned_cols=150 Identities=15% Similarity=0.199 Sum_probs=124.0
Q ss_pred CccccCCCCCcEEecC----CC-----CeEeCCCccCCCcEEEEEEccCCChhhHHH-HHHHHHcHHHHHHcCCE-EEEE
Q 025522 68 SEDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLI 136 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~----~G-----~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~gv~-vVaV 136 (251)
+...|+.+|+|++.+. +| +.++|+++++++++||+|||+.|||+|+.| +++|++++++|++.|+. ||+|
T Consensus 6 g~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 6 GTDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ----CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred cccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3456779999999998 57 999999976777899999999999999999 99999999999999999 9999
Q ss_pred eCCCHHHHHHHHHHhCC--ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccc
Q 025522 137 GPGSVEQARTFSEQTKF--KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 213 (251)
Q Consensus 137 s~~~~~~~~~f~~~~~~--pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q 213 (251)
+.++.+.+++|++++++ +| +++|++.++.++||+..... . .++ +...
T Consensus 86 s~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----~----------~~~---------------g~~~ 135 (171)
T 2pwj_A 86 AINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLS-----A----------GLL---------------GIRS 135 (171)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECT-----T----------TTC---------------CEEE
T ss_pred eCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccc-----c----------ccC---------------Cccc
Confidence 99999999999999996 79 99999999999999874321 0 000 0012
Q ss_pred cceEEEEcCCCCeEEEEEeCCCCCC--CCCHHHHHHHh
Q 025522 214 QGGIIVAGPGKSNISYIHRDKEAGD--DPDIQDILKAC 249 (251)
Q Consensus 214 ~gg~fVid~ggg~I~~~h~~~~~~D--~~~~~eIL~al 249 (251)
.+.+|+|+ + |+|+|.|++.++++ +.++++||+++
T Consensus 136 ~~~t~~I~-~-G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 136 ERWSAYVV-D-GKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp CCEEEEEE-T-TEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred ceeEEEEE-C-CEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 34578888 7 69999999988875 57899999875
No 12
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.92 E-value=4.1e-25 Score=191.94 Aligned_cols=145 Identities=10% Similarity=0.105 Sum_probs=125.2
Q ss_pred CccccCCCCCcE----EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 68 SEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 68 ~~~~g~~ap~f~----l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
..++|++||+|+ +.|.+|+.|+|+++ +++++||+||+..|||.|..|+.+|++.+++|++.|++||+||.|+.+.
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 458999999999 45788999999998 5689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
.++|+++. +++| +++|+++++.++||+.... .+...+
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~-----------------------------------~g~~~R 148 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEES-----------------------------------QGVAYR 148 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT-----------------------------------TTEECE
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccC-----------------------------------CCeeEE
Confidence 99999764 6899 9999999999999986531 013457
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+||||++ |+|+|.++....-. ..++|||++++
T Consensus 149 ~tFiIDp~-g~Ir~~~~~~~~~g-r~~~EvLr~l~ 181 (219)
T 3tue_A 149 GLFIIDPH-GMLRQITVNDMPVG-RSVEEVLRLLE 181 (219)
T ss_dssp EEEEECTT-SBEEEEEEECTTCC-CCHHHHHHHHH
T ss_pred EEEEECCC-CeEEEEEEecCCCC-CCHHHHHHHHH
Confidence 99999999 69999997644333 37889988875
No 13
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.92 E-value=4e-25 Score=184.10 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=124.3
Q ss_pred ccccCC----CCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHH
Q 025522 69 EDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (251)
Q Consensus 69 ~~~g~~----ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~ 144 (251)
.++|+. +|+|++.|.+|+.++|+++ +++++||+|+++.||+.|+.++++|+++++++++.|++||+|+.|+.+.+
T Consensus 21 l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~ 99 (179)
T 3ixr_A 21 MNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSH 99 (179)
T ss_dssp SCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHH
T ss_pred cCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 455555 9999999999999999998 55678888888999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCC
Q 025522 145 RTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 223 (251)
Q Consensus 145 ~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 223 (251)
++|+++++++| +++|++.+++++||+...... + |.. .....+++||||++
T Consensus 100 ~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~-----------------~---------g~~---~~~~~p~~~lID~~ 150 (179)
T 3ixr_A 100 DSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTM-----------------Y---------GRQ---VIGIERSTFLIGPT 150 (179)
T ss_dssp HHHHHHHTCCSCEEECTTCHHHHHTTCEEEECC-----------------C-----------C---EEEECCEEEEECTT
T ss_pred HHHHHHcCCceEEEECCchHHHHHcCCcccccc-----------------c---------Ccc---cCCcceEEEEECCC
Confidence 99999999999 999999999999998753210 0 000 00136789999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 224 KSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 224 gg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|++.|.+ ......+++++++++
T Consensus 151 -G~I~~~~~~--~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 151 -HRIVEAWRQ--VKVPGHAEEVLNKLK 174 (179)
T ss_dssp -SBEEEEECS--CCSTTHHHHHHHHHH
T ss_pred -CEEEEEEcC--CCCCCCHHHHHHHHH
Confidence 699999944 455667888888775
No 14
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.4e-25 Score=190.39 Aligned_cols=145 Identities=14% Similarity=0.145 Sum_probs=126.0
Q ss_pred CccccCCCCCcEEe---cCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHH
Q 025522 68 SEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (251)
Q Consensus 68 ~~~~g~~ap~f~l~---d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~ 144 (251)
..++|++||||++. |.+|+.|+|+++ +++++||+||+..|||.|..|+.+|++.+++|++.|++||+||.|+....
T Consensus 22 ~~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh 100 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSL 100 (216)
T ss_dssp CCCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred hhhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhH
Confidence 36899999999975 777899999998 56789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 145 RTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 145 ~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
++|++.. +++| +++|+++++.++||+.... .+...+|
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~-----------------------------------~g~~~R~ 145 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE-----------------------------------EGVALRG 145 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc-----------------------------------CCceeeE
Confidence 9999764 5899 9999999999999986531 1134679
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+||||++ |+|+|..+....- -..++|+|++++
T Consensus 146 tFiID~~-G~Ir~~~v~~~~~-grn~dEiLr~l~ 177 (216)
T 3sbc_A 146 LFIIDPK-GVIRHITINDLPV-GRNVDEALRLVE 177 (216)
T ss_dssp EEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEECCC-CeEEEEEEcCCCC-CCCHHHHHHHHH
Confidence 9999999 6999999875544 458999998875
No 15
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.92 E-value=7.1e-25 Score=186.54 Aligned_cols=147 Identities=10% Similarity=0.118 Sum_probs=129.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
..++|+.+|+|++.|.+|+.++|+++ +++++||.|+++.||++|+.+++.|+++++++ .|++||+|+.|+.+.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 36889999999999999999999998 55667777777899999999999999999999 7999999999999999999
Q ss_pred HHHhCC-ce-EEEcC-ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 148 SEQTKF-KG-VYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 148 ~~~~~~-pf-l~sDp-~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
++++++ +| +++|+ +.++.++||+..... +. .+...+++||||++
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~----~~----------------------------~g~~~p~~~lID~~- 174 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAITEG----PL----------------------------AGLTARAVVVLDGQ- 174 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEECSS----TT----------------------------TTSBCCEEEEECTT-
T ss_pred HHHcCCCCceEEecCchHHHHHHhCceeecc----cC----------------------------CCccccEEEEECCC-
Confidence 999999 99 99999 999999999875321 00 01235789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|+|.++.....+.++++++|++++
T Consensus 175 G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 175 DNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp SBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred CeEEEEEecCCcccCCCHHHHHHhhC
Confidence 69999999999999999999999875
No 16
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.92 E-value=7.2e-25 Score=179.68 Aligned_cols=146 Identities=12% Similarity=0.176 Sum_probs=126.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~ 148 (251)
.++|+.+|+|++.|.+|+.++++++ +++++||.|+++.||++|+.+++.|+++++++ .|++||+|+.|+.+.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 5789999999999999999999998 55566666666999999999999999999998 89999999999999999999
Q ss_pred HHhCC-ce-EEEcC-ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCC
Q 025522 149 EQTKF-KG-VYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 225 (251)
Q Consensus 149 ~~~~~-pf-l~sDp-~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 225 (251)
+++++ +| +++|+ +.+++++||+..... +. .+...+.+||+|++ |
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~----~~----------------------------~g~~~p~~~liD~~-G 140 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDIQTG----PL----------------------------AGLTSRAVIVLDEQ-N 140 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEECSS----TT----------------------------TTSBCCEEEEECTT-S
T ss_pred HHcCCCceEEeeccccchHHHHhCceeccc----cc----------------------------CCccceeEEEEcCC-C
Confidence 99999 79 99998 899999999864210 00 01235789999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 226 NISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 226 ~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+|++.|.+.+..++++++++|++++
T Consensus 141 ~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 141 NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 9999999888999999999999874
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.92 E-value=4.5e-24 Score=173.81 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=122.6
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCc-EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~-vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f 147 (251)
.++|+.+|+|++.|.+|+.++++++ ++++ +||.|+|+.|||+|+.+++.|+++++++++.|+.+|+|+.|+.+.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 4689999999999999999999998 4454 6666666999999999999999999999999999999999999999999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
+++++++| +++|++..++++||+... ....|.+||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~~-------------------------------------~~~~P~~~lid~~-G~ 122 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKGF-------------------------------------ILPARITFVIDKK-GI 122 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCCS-------------------------------------SSCCCEEEEECTT-SB
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCCc-------------------------------------CcccceEEEECCC-CE
Confidence 99999999 999999999999987621 0235689999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 227 ISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|++.+.+. ......+++++++++
T Consensus 123 i~~~~~g~-~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 123 IRHIYNSQ-MNPANHVNEALKALK 145 (161)
T ss_dssp EEEEEECS-SCTTHHHHHHHHHHH
T ss_pred EEEEEecC-CCCCcCHHHHHHHHH
Confidence 99999873 334567788888764
No 18
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.92 E-value=2.6e-24 Score=181.16 Aligned_cols=151 Identities=13% Similarity=0.130 Sum_probs=127.2
Q ss_pred ccccCCCCCcEEecCCC----------CeEeCCCccCCCcEEEEEEccCCChhhHH-HHHHHHHcHHHHHHcCC-EEEEE
Q 025522 69 EDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLI 136 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G----------~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~~~~gv-~vVaV 136 (251)
.++|+++|++++...++ +.++|+++++++++||+|||+.|||.|.. |+++|++.+++|+++|+ +||+|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 47899999988765433 68999998788899999999999999999 99999999999999999 99999
Q ss_pred eCCCHHHHHHHHHHhCCc--e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccc
Q 025522 137 GPGSVEQARTFSEQTKFK--G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQ 213 (251)
Q Consensus 137 s~~~~~~~~~f~~~~~~p--f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q 213 (251)
|.+++...++|+++.+++ | +++|++.++.++||+..... . .|+ +...
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~-----~----------~G~---------------g~~s 139 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLS-----A----------RGM---------------GIRS 139 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECG-----G----------GTC---------------CEEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCcccc-----c----------cCC---------------Cccc
Confidence 999999999999999999 9 99999999999999875321 0 010 0123
Q ss_pred cceEEEEcCCCCeEEEEEeCCCC-CCCCCHHHHHHHhhC
Q 025522 214 QGGIIVAGPGKSNISYIHRDKEA-GDDPDIQDILKACCS 251 (251)
Q Consensus 214 ~gg~fVid~ggg~I~~~h~~~~~-~D~~~~~eIL~al~~ 251 (251)
.+++||| ++ |+|+|.+++... .+..+.+++|++++|
T Consensus 140 ~R~tfII-~d-G~I~~~~~~~~~~~~~~~a~~vL~~Lk~ 176 (176)
T 4f82_A 140 LRYAMVI-DG-GVVKTLAVEAPGKFEVSDAASVLATLTS 176 (176)
T ss_dssp CCEEEEE-ET-TEEEEEEECCTTCCSSSSHHHHHHTCCC
T ss_pred ccEEEEE-cC-CEEEEEEEcCCCCcchhhHHHHHHHhhC
Confidence 5689999 77 699999998622 255689999999876
No 19
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.92 E-value=3e-24 Score=181.49 Aligned_cols=150 Identities=11% Similarity=0.113 Sum_probs=127.7
Q ss_pred cccCCCCCcEEec--C---------CC----CeEeCCCccCCCcEEEEEEccCCChhhH-HHHHHHHHcHHHH-HHcCCE
Q 025522 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (251)
Q Consensus 70 ~~g~~ap~f~l~d--~---------~G----~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~-~~~gv~ 132 (251)
++|+.+|+|++.+ . +| +.++|+++++++++||+|||+.|||.|. .|++.+++.+++| ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7999999778889999999999999999 9999999999999 999995
Q ss_pred -EEEEeCCCHHHHHHHHHHhCC-ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCC
Q 025522 133 -LVLIGPGSVEQARTFSEQTKF-KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSR 209 (251)
Q Consensus 133 -vVaVs~~~~~~~~~f~~~~~~-pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g 209 (251)
|++||.+++..+++|++++++ +| +++|+++++.++||+..... . .|+
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~-----~----------~G~--------------- 131 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKS-----N----------FFM--------------- 131 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECG-----G----------GTC---------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceecc-----c----------cCC---------------
Confidence 999999999999999999999 69 99999999999999975321 0 010
Q ss_pred CccccceEEEEcCCCCeEEEEEeCCCCCC--------CCCHHHHHHHhhC
Q 025522 210 GGWQQGGIIVAGPGKSNISYIHRDKEAGD--------DPDIQDILKACCS 251 (251)
Q Consensus 210 ~~~q~gg~fVid~ggg~I~~~h~~~~~~D--------~~~~~eIL~al~~ 251 (251)
+....+++|||| + |+|+|.++..++.+ +.+++++|+++++
T Consensus 132 g~~~~R~tfvId-d-G~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 GMRPWRFVAIVE-N-NILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECCEEEEEE-T-TEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CCceEEEEEEEc-C-CEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 112356799998 7 69999999877654 7899999999874
No 20
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.92 E-value=5.3e-24 Score=185.56 Aligned_cols=144 Identities=11% Similarity=0.092 Sum_probs=126.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhH-----HHHHHHHHcHHHHHHcCCEEEEEeCCCHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSVE 142 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~-----~el~~L~~~~~~~~~~gv~vVaVs~~~~~ 142 (251)
..++|+.||+|+|.|.+|+.++|+++ +++++||+||+..|||+|. .|++.|++. + .|+.||+||.|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 36889999999999999999999996 6678888888888899999 999999988 4 79999999999999
Q ss_pred HHHHHHHHhCC-ce-EEEcC-ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 143 QARTFSEQTKF-KG-VYADP-NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 143 ~~~~f~~~~~~-pf-l~sDp-~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
.+++|++++++ +| +++|+ +.++.++||+..... |. .++..+++||
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~----~~----------------------------~G~~~p~tfv 142 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEY----PL----------------------------SGYTSPAIIL 142 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCST----TS----------------------------TTCBCCEEEE
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccc----cc----------------------------cCCccCEEEE
Confidence 99999999999 69 99999 699999999875310 00 0134679999
Q ss_pred EcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 220 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||++ |+|+|.++..++.++|+++++|++++
T Consensus 143 ID~d-G~I~~~~~~~~~~~~pd~~evl~~L~ 172 (224)
T 3keb_A 143 ADAA-NVVHYSERLANTRDFFDFDAIEKLLQ 172 (224)
T ss_dssp ECTT-CBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred EcCC-CEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 9998 69999999999999999999999985
No 21
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.91 E-value=1.3e-24 Score=182.18 Aligned_cols=151 Identities=13% Similarity=0.037 Sum_probs=126.0
Q ss_pred CccccCCCCCcEEecCCC-CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCE-EEEEeCCCHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR 145 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G-~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~-vVaVs~~~~~~~~ 145 (251)
..++|+.+|+|+|.+.++ +.++|+++++++++||+||++.|||.|..|++.+++.+++|++.|++ |++||.|++...+
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 368999999999994432 89999997788899999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHhCC--ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 146 TFSEQTKF--KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 146 ~f~~~~~~--pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
+|+++.++ +| +++|+++++.++||+..... . . |. +....+++||||
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~----------~----~-g~---------------g~~~~R~tfvId- 141 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTELDSS----------K----M-LG---------------NNRSRRYAMLID- 141 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCH----------H----H-HS---------------SCCBCCEEEEEE-
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCceecc----------c----c-CC---------------CcceEEEEEEEe-
Confidence 99999999 99 99999999999999975321 0 0 10 012356899998
Q ss_pred CCCeEEEEEeCCCCC--CCCCHHHHHHHhh
Q 025522 223 GKSNISYIHRDKEAG--DDPDIQDILKACC 250 (251)
Q Consensus 223 ggg~I~~~h~~~~~~--D~~~~~eIL~al~ 250 (251)
+ |+|+|.++..++. .+.+.++||++++
T Consensus 142 d-G~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 142 D-NKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp T-TEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred C-CEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 7 6999999988776 4567899998875
No 22
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.91 E-value=2.7e-23 Score=167.81 Aligned_cols=145 Identities=14% Similarity=0.168 Sum_probs=124.7
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~ 148 (251)
...|+.+|+|++.|.+|+.++++++.+++++||.|+|+.||++|+.+++.|+++++++++.|+++|+|+.|+.+.+++|+
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~ 88 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWA 88 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHH
Confidence 67899999999999999999999983323667766679999999999999999999998889999999999999999999
Q ss_pred HHhCCce-EEEcC--ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCC
Q 025522 149 EQTKFKG-VYADP--NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 225 (251)
Q Consensus 149 ~~~~~pf-l~sDp--~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 225 (251)
++++++| +++|. +..+++.||+.... .+.+.+.+||+|++ |
T Consensus 89 ~~~~~~~~~~~d~~~~~~~~~~~~v~~~~-----------------------------------~~~p~~~~~lid~~-G 132 (160)
T 1xvw_A 89 TQSGFTFPLLSDFWPHGAVSQAYGVFNEQ-----------------------------------AGIANRGTFVVDRS-G 132 (160)
T ss_dssp HHHTCCSCEEECTTTTTHHHHHTTCEETT-----------------------------------TTEECSEEEEECTT-S
T ss_pred HhcCCCceEEecCCcChHHHHHcCCcccc-----------------------------------CCCeeeeEEEECCC-C
Confidence 9999999 99995 89999999876421 01223489999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 226 NISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 226 ~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+|++.|.+. ..+.+++++++++++
T Consensus 133 ~i~~~~~g~-~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 133 IIRFAEMKQ-PGEVRDQRLWTDALA 156 (160)
T ss_dssp BEEEEEECC-TTCCCCHHHHHHHHH
T ss_pred eEEEEEecC-CCCCCCHHHHHHHHH
Confidence 999999985 667789999998875
No 23
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.91 E-value=1.6e-23 Score=181.67 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=126.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~ 148 (251)
...|+.+|+|++.|.+| .++|+++.+++++||+|||+.|||+|+.|+++|++++++|++.|++||+|+.|+.+.+++|+
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999986555899999999999999999999999999999999999999999999899999
Q ss_pred HH----------hCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceE
Q 025522 149 EQ----------TKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 217 (251)
Q Consensus 149 ~~----------~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 217 (251)
++ .+++| +++|++++++++||+...... . + .+.....+++
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~----~----------------------~---~g~~~~~p~~ 134 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEK----D----------------------E---KGMPVTARVV 134 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTT----C----------------------S---SSCCTTCCEE
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccc----c----------------------C---CCccccceEE
Confidence 87 78999 999999999999998653100 0 0 0011347899
Q ss_pred EEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 218 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||||++ |+|++.+.+....++ +.+||+++++
T Consensus 135 fiID~~-G~I~~~~~~~~~~gr-~~~eil~~i~ 165 (224)
T 1prx_A 135 FVFGPD-KKLKLSILYPATTGR-NFDEILRVVI 165 (224)
T ss_dssp EEECTT-SBEEEEEECCTTBCC-CHHHHHHHHH
T ss_pred EEECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 999998 699999987554434 6888888764
No 24
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.91 E-value=1.3e-23 Score=182.23 Aligned_cols=150 Identities=13% Similarity=0.155 Sum_probs=128.0
Q ss_pred ccccCCCCCcEEecC-CCC--eEeCCCccCCCcEEEEEEccCCChhhH-HHHHHHHHcHHHHHHcCC-EEEEEeCCCHHH
Q 025522 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~-~G~--~v~ls~l~~~~~vVLvF~R~~~Cp~C~-~el~~L~~~~~~~~~~gv-~vVaVs~~~~~~ 143 (251)
.++|+.+|+|++.|. +|+ .++|+++++++++||.|+|+.|||+|+ .|+++|++++++|++.|+ +||+|+.++.+.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 468999999999996 777 999999547778888888899999999 999999999999999999 999999999999
Q ss_pred HHHHHHHhCCc-e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc
Q 025522 144 ARTFSEQTKFK-G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 221 (251)
Q Consensus 144 ~~~f~~~~~~p-f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 221 (251)
+++|+++++++ | +++|++.++.++||+..... . .|+ +....+++||+
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~-----~----------~g~---------------~~~~~p~t~li- 131 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKE-----D----------LGF---------------GKRSWRYSMLV- 131 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECT-----T----------TTC---------------CEEECCEEEEE-
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCceeecc-----c----------ccC---------------cccceeEEEEE-
Confidence 99999999997 9 99999999999999875311 0 010 00145789999
Q ss_pred CCCCeEEEEEeCCCCCCC----CCHHHHHHHhh
Q 025522 222 PGKSNISYIHRDKEAGDD----PDIQDILKACC 250 (251)
Q Consensus 222 ~ggg~I~~~h~~~~~~D~----~~~~eIL~al~ 250 (251)
++ |+|+|.|++..+.++ .+++++|+++.
T Consensus 132 ~~-G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 132 KN-GVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp ET-TEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred EC-CEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 87 699999999877766 78999999875
No 25
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.91 E-value=1.8e-23 Score=175.27 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=119.7
Q ss_pred cccCCCCCcEEecC-CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHH
Q 025522 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (251)
Q Consensus 70 ~~g~~ap~f~l~d~-~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~ 146 (251)
.+|+.+|+|++.|. +| +.++|+++ +++++||.|+++.|||+|+.++++|++++++|++.|++||+|+.++.+.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57899999999999 59 89999998 4555555555579999999999999999999999999999999999999999
Q ss_pred HHHHh----CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc
Q 025522 147 FSEQT----KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 221 (251)
Q Consensus 147 f~~~~----~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 221 (251)
|++++ +++| +++|++.+++++||+..... ++..+.+||||
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p~~~lID 125 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNMREDE-----------------------------------GLADRATFVVD 125 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTT-----------------------------------TEECEEEEEEC
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCccCCC-----------------------------------CceeeEEEEEC
Confidence 99999 8999 99999999999999864210 12357899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 222 PGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 222 ~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
++ |+|++.|.+....+ .+.++++++++
T Consensus 126 ~~-G~i~~~~~~~~~~~-~~~~~l~~~l~ 152 (186)
T 1n8j_A 126 PQ-GIIQAIEVTAEGIG-RDASDLLRKIK 152 (186)
T ss_dssp TT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred CC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 98 69999998754322 35788877664
No 26
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.90 E-value=2.3e-23 Score=180.25 Aligned_cols=148 Identities=9% Similarity=0.060 Sum_probs=123.0
Q ss_pred CCCCccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 65 PSVSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 65 ~~~~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
.|....+|+.+|+|++.|. +| +.++|+++++++++||.|+++.|||+|+.+++.|++++++|++.|++||+|+.|+
T Consensus 21 ~M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 21 HMKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp -----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred ccccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3555789999999999998 99 9999999856666666666699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcc
Q 025522 141 VEQARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGW 212 (251)
Q Consensus 141 ~~~~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~ 212 (251)
.+.+++|+++. +++| +++|++.++.++||+. ... | .
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~-----------------g------------------~ 144 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDN-----------------S------------------F 144 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETT-----------------T------------------E
T ss_pred HHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccC-----------------C------------------C
Confidence 99999999988 7899 9999999999999986 310 0 2
Q ss_pred ccceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 213 QQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 213 q~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
..+.+||||++ |+|+|.+.+.. ...++.++++++++
T Consensus 145 ~~P~~~lID~~-G~I~~~~~g~~-~~~~~~~ell~~l~ 180 (221)
T 2c0d_A 145 ALRGLFIIDKN-GCVRHQTVNDL-PIGRNVQEVLRTID 180 (221)
T ss_dssp ECEEEEEECTT-SBEEEEEEECT-TCCCCHHHHHHHHH
T ss_pred ccceEEEECCC-CeEEEEEecCC-CCCCCHHHHHHHHH
Confidence 35689999998 69999998754 33468888888764
No 27
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.90 E-value=3.2e-23 Score=181.22 Aligned_cols=150 Identities=11% Similarity=0.096 Sum_probs=124.4
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~ 148 (251)
..+|+.+|+|++.+.+| .++|+++.+++++||+|+++.|||+|..|+++|++++++|++.|++||+|+.|+.+.+++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 56899999999999999 99999985444788888889999999999999999999999999999999999999999999
Q ss_pred H------Hh--CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 149 E------QT--KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 149 ~------~~--~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
+ +. +++| +++|++++++++||+...... . + .+.....+++||
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~----~----------------------~---~g~~~~~p~~fi 132 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDER----T----------------------S---TGMPLTCRAVFI 132 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEE----C----------------------T---TCCEEECEEEEE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccc----c----------------------C---CCcccccceEEE
Confidence 8 56 8899 999999999999998653100 0 0 011235789999
Q ss_pred EcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 220 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||++ |+|++.+......++ +++|||++++
T Consensus 133 ID~~-G~I~~~~~~~~~~gr-~~~eilr~l~ 161 (233)
T 2v2g_A 133 IGPD-KKLKLSILYPATTGR-NFSEILRVID 161 (233)
T ss_dssp ECTT-SBEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred ECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 9998 699999987544333 6889988764
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.90 E-value=3.7e-23 Score=178.90 Aligned_cols=150 Identities=10% Similarity=0.045 Sum_probs=123.9
Q ss_pred ccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHH
Q 025522 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~ 146 (251)
...|+.+|+|++.+. +| .++|+++.+++++||+|||+.|||.|..|+++|++++++|++.|++||+|+.|+.+.+++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 568999999999999 99 999999844447999999999999999999999999999999999999999999988888
Q ss_pred HHH-------HhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEE
Q 025522 147 FSE-------QTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 218 (251)
Q Consensus 147 f~~-------~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 218 (251)
|.+ +.+++| +++|+++++.++||+..... +. + .+.....+++|
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~----~~----------------------~---~g~~~~~p~~f 132 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQE----KD----------------------I---TGLPLTCRCLF 132 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEE----EC----------------------T---TSCEEECEEEE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCccc----cc----------------------C---CCCCcccceEE
Confidence 887 478999 99999999999999865310 00 0 00013478999
Q ss_pred EEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 219 VAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 219 Vid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|||++ |+|++.+.+....++ +.+||+++++
T Consensus 133 lID~~-G~I~~~~~~~~~~g~-~~~ell~~i~ 162 (220)
T 1xcc_A 133 FISPE-KKIKATVLYPATTGR-NAHEILRVLK 162 (220)
T ss_dssp EECTT-SBEEEEEEECTTBCC-CHHHHHHHHH
T ss_pred EECCC-CEEEEEEecCCCCCC-CHHHHHHHHH
Confidence 99998 699999986543333 7888888764
No 29
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.89 E-value=9.7e-23 Score=174.68 Aligned_cols=146 Identities=9% Similarity=0.022 Sum_probs=119.6
Q ss_pred CCccccCCCCCcEEecC---CCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 67 VSEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~---~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
....+|+.+|+|++.|. +|+.++|+++ +++++||.|+++.|||+|+.++++|++++++|++.|++||+|+.|+.+.
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 95 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 95 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 34678999999999974 5689999998 4555555555599999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
+++|+++. +++| +++|++.++.++||+..... +...+
T Consensus 96 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~-----------------------------------g~~~p 140 (211)
T 2pn8_A 96 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS-----------------------------------GHTLR 140 (211)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT-----------------------------------TEECE
T ss_pred HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCC-----------------------------------Ccccc
Confidence 99999987 7899 99999999999999864210 12367
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
.+||||++ |+|++.+++....+ .+.++++++++
T Consensus 141 ~~~lID~~-G~I~~~~~g~~~~~-~~~~ell~~l~ 173 (211)
T 2pn8_A 141 GLFIIDDK-GILRQITLNDLPVG-RSVDETLRLVQ 173 (211)
T ss_dssp EEEEECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred eEEEECCC-CEEEEEEecCCCCC-CCHHHHHHHHH
Confidence 89999998 69999998743332 37788887664
No 30
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.89 E-value=1.5e-22 Score=173.72 Aligned_cols=146 Identities=10% Similarity=0.061 Sum_probs=124.1
Q ss_pred CCccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH
Q 025522 67 VSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~ 142 (251)
....+|+.+|+|++.|. +| +.++|+++++++++||.|+++.|||+|+.++++|++++++|++.|++||+|+.|+.+
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 34688999999999998 89 899999986666777766669999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 143 QARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 143 ~~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
.+++|+++. +++| +++|++.+++++||+... . | ...
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~-~-----------------g------------------~~~ 142 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFD-D-----------------S------------------VSL 142 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------T------------------EEC
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccc-c-----------------C------------------Ccc
Confidence 999999988 8899 999999999999998641 0 0 235
Q ss_pred ceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 215 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+++||||++ |+|+|.+.+.... ..+.++++++++
T Consensus 143 p~~~lID~~-G~i~~~~~~~~~~-~~~~~ell~~l~ 176 (213)
T 2i81_A 143 RAFVLIDMN-GIVQHLLVNNLAI-GRSVDEILRIID 176 (213)
T ss_dssp EEEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred cEEEEECCC-CEEEEEEecCCCC-CCCHHHHHHHHH
Confidence 689999998 6999999875433 347888887764
No 31
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.89 E-value=4.1e-23 Score=167.52 Aligned_cols=133 Identities=8% Similarity=0.126 Sum_probs=112.8
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCc-EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~-vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~ 145 (251)
...++|+.+|+|++.|.+|+.++++++.++++ +||.||++.|||+|+.+++.|+++++++++.| +||+|+.++.+.++
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 83 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQK 83 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHH
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHH
Confidence 34688999999999999999999999954333 55555679999999999999999999999999 99999999999999
Q ss_pred HHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 146 TFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 146 ~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
+|+++++++| +++|++.+++++||+... |. .| ..+.+||| ++
T Consensus 84 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~------p~---------------------~g--------~~~~~~li-~~- 126 (159)
T 2a4v_A 84 KFQSKQNLPYHLLSDPKREFIGLLGAKKT------PL---------------------SG--------SIRSHFIF-VD- 126 (159)
T ss_dssp HHHHHHTCSSEEEECTTCHHHHHHTCBSS------SS---------------------SC--------BCCEEEEE-ET-
T ss_pred HHHHHhCCCceEEECCccHHHHHhCCccc------cc---------------------CC--------ccceEEEE-cC-
Confidence 9999999999 999999999999998642 10 00 24579999 88
Q ss_pred CeEEEEEeCCCCC
Q 025522 225 SNISYIHRDKEAG 237 (251)
Q Consensus 225 g~I~~~h~~~~~~ 237 (251)
|+|++.|.+..+.
T Consensus 127 G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 127 GKLKFKRVKISPE 139 (159)
T ss_dssp TEEEEEEESCCHH
T ss_pred CEEEEEEccCCcc
Confidence 6999999875443
No 32
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.89 E-value=1.5e-22 Score=167.56 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=118.6
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCC-ChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~-Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~ 146 (251)
....|+.+|+|++.|.+|+.++++++ ++ +++|++|++.| |++|+.+++.|++++++ .++++|+|+.|+.+.+++
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~-~g-k~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~ 91 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQF-RG-KSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKR 91 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TT-SCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTT
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHc-CC-CEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHH
Confidence 35789999999999999999999998 44 45566666666 99999999999999887 889999999999999999
Q ss_pred HHHHhCC-ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 147 FSEQTKF-KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 147 f~~~~~~-pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
|++++++ +| +++|++..++++||+..... + ..+...|.+||+|++
T Consensus 92 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~----~----------------------------~~g~~~p~~~lid~~- 138 (175)
T 1xvq_A 92 FCGAEGTENVMPASAFRDSFGEDYGVTIADG----P----------------------------MAGLLARAIVVIGAD- 138 (175)
T ss_dssp CC------CEEEEECTTSSHHHHTTCBBCSS----T----------------------------TTTSBCSEEEEECTT-
T ss_pred HHHHcCCCCceEeeCCHHHHHHHhCCccccc----c----------------------------cCCcccceEEEECCC-
Confidence 9999999 89 99999999999999865311 0 011346789999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|++.+.+....+.++++++|+++.
T Consensus 139 G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 139 GNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp SBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred CeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 69999999878888999999999875
No 33
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.89 E-value=1.5e-22 Score=179.09 Aligned_cols=146 Identities=9% Similarity=0.055 Sum_probs=123.0
Q ss_pred CCccccCCCCCcEEe---cCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~---d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
....+|+.+|+|++. |.+|+.++|+++ +++++||+|+++.|||+|..++++|++++++|++.|++||+|+.|+.+.
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 456789999999976 557889999998 5667777777799999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
.++|+++. +++| +++|++.+++++||+.... .+...+
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~-----------------------------------~g~~~p 183 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED-----------------------------------SGHTLR 183 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcccc-----------------------------------CCCccc
Confidence 99999886 7999 9999999999999986421 012467
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
++||||++ |+|++.+++.... ...++++|++++
T Consensus 184 ~tflID~~-G~I~~~~~~~~~~-~~~~~eil~~L~ 216 (254)
T 3tjj_A 184 GLFIIDDK-GILRQITLNDLPV-GRSVDETLRLVQ 216 (254)
T ss_dssp EEEEECTT-SBEEEEEEECTTC-CCCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999975443 346788887764
No 34
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.89 E-value=2.9e-22 Score=166.82 Aligned_cols=143 Identities=12% Similarity=0.201 Sum_probs=119.6
Q ss_pred cccCCCCCcEEecCCCC----eEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~----~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~ 145 (251)
++|+.+|+|++.|.+|+ .++++++ +++++||.|+|+.||++|+.+++.|+++++++++.|+++|+|+.++.+.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57899999999999999 9999998 455666666669999999999999999999999999999999999999999
Q ss_pred HHHHHh----CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 146 TFSEQT----KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 146 ~f~~~~----~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
+|++++ +++| +++|++.+++++||+..... +...|.+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~-----------------------------------g~~~P~~~li 125 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEET-----------------------------------GLADRGTFII 125 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTT-----------------------------------TEECEEEEEE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCCcCCC-----------------------------------CceeeEEEEE
Confidence 999988 8999 99999999999999865210 1236789999
Q ss_pred cCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 221 GPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 221 d~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|++ |+|++.|.+....+ .+.++++++++
T Consensus 126 d~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 153 (187)
T 1we0_A 126 DPD-GVIQAIEINADGIG-RDASTLINKVK 153 (187)
T ss_dssp CTT-SBEEEEEEECTTSC-CCTTHHHHHHH
T ss_pred CCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 998 69999999865433 24566666553
No 35
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.89 E-value=2.4e-22 Score=175.92 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=121.2
Q ss_pred CCccccCCCCCcEEec---CCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 67 VSEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d---~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
....+|+.+|+|++.+ .+|+.++|+++ +++++||.|++..|||+|+.++++|++++++|++.|++||+|+.|+.+.
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~ 124 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFT 124 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 3468999999999774 45679999998 5556666666669999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
.++|+++. +++| +++|++.++.++||+.... .+...+
T Consensus 125 ~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~-----------------------------------~g~~~p 169 (240)
T 3qpm_A 125 HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLED-----------------------------------QGHTLR 169 (240)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcccc-----------------------------------CCCccc
Confidence 99999886 7999 9999999999999986421 012467
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
++||||++ |+|++.+.+.... ...++++++.++
T Consensus 170 ~~flID~~-G~I~~~~~~~~~~-~~~~~eil~~l~ 202 (240)
T 3qpm_A 170 GLFIIDEK-GVLRQITMNDLPV-GRSVDETLRLVQ 202 (240)
T ss_dssp EEEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred eEEEEcCC-CeEEEEEecCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999875443 346788887764
No 36
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.89 E-value=1.4e-22 Score=169.71 Aligned_cols=143 Identities=12% Similarity=0.093 Sum_probs=121.4
Q ss_pred cccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH
Q 025522 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (251)
Q Consensus 70 ~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~ 145 (251)
++|+.+|+|++.|. +| +.++++++++++++||.|+++.||++|+.+++.|+++++++++.|++||+|+.++.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 46899999999998 99 999999986666666666669999999999999999999999999999999999999999
Q ss_pred HHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceE
Q 025522 146 TFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 217 (251)
Q Consensus 146 ~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 217 (251)
+|++++ +++| +++|++.+++++||+... . +...|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-~-----------------------------------g~~~P~~ 124 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFN-E-----------------------------------SVALRAF 124 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-T-----------------------------------TEECCEE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCc-C-----------------------------------CceeeEE
Confidence 999988 8899 999999999999997641 0 0235689
Q ss_pred EEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 218 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||+|++ |+|++.+.+....+ .+.++++++++
T Consensus 125 ~liD~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 155 (192)
T 2h01_A 125 VLIDKQ-GVVQHLLVNNLALG-RSVDEILRLID 155 (192)
T ss_dssp EEECTT-SBEEEEEEGGGSSG-GGHHHHHHHHH
T ss_pred EEEcCC-CEEEEEEeCCCCCC-CCHHHHHHHHH
Confidence 999998 69999998754433 36788877664
No 37
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.88 E-value=4.6e-22 Score=168.18 Aligned_cols=145 Identities=12% Similarity=0.170 Sum_probs=122.1
Q ss_pred CccccCCCCCcEEecC--CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
...+|+.+|+|++.+. +| +.++++++ +++++||.|+++.|||+|+.+++.|+++++++++.|+++|+|+.++.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4578999999999997 78 89999998 4555666665699999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
+++|++++ +++| +++|++.+++++||+.... .+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 128 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEE-----------------------------------DGVAYR 128 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETT-----------------------------------TTEECE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCC-----------------------------------CCceee
Confidence 99999988 8899 9999999999999986421 012467
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
++||+|++ |+|++.+.+.... ..+.++++++++
T Consensus 129 ~~~lid~~-G~i~~~~~g~~~~-~~~~~ell~~l~ 161 (202)
T 1uul_A 129 GLFIIDPK-QNLRQITVNDLPV-GRDVDEALRLVK 161 (202)
T ss_dssp EEEEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEEEECCC-CEEEEEEeCCCCC-CCCHHHHHHHHH
Confidence 89999998 6999999875433 357888887764
No 38
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.88 E-value=8.5e-23 Score=166.46 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=123.8
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCC-ChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~-Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~ 146 (251)
..+.|+.+|+|++.|.+|+.++++++ ++ +.+|++|++.| |++|+.+++.|+++++++ .++++|+|+.|+.+.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~-~g-k~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM-KG-KVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH-TT-SCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh-CC-CeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 36789999999999999999999998 34 45666667777 999999999999999999 899999999999988999
Q ss_pred HHHHhCC-ce-EEEc-CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCC
Q 025522 147 FSEQTKF-KG-VYAD-PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 223 (251)
Q Consensus 147 f~~~~~~-pf-l~sD-p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 223 (251)
|++++++ +| +++| ++.+++++||+.... .+...|.+||+|++
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~-----------------------------------~g~~~p~~~lid~~ 137 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYIKE-----------------------------------LRLLARSVFVLDEN 137 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBBTT-----------------------------------TCSBCCEEEEECTT
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCcccc-----------------------------------CCceeeEEEEEcCC
Confidence 9999999 89 9999 899999999876421 01235689999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 224 KSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 224 gg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
|+|++.|.+.+..++++.++++++++
T Consensus 138 -G~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 138 -GKVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp -SCEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred -CcEEEEEecCCcCCCCCHHHHHHHHH
Confidence 69999999988899999999998875
No 39
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.88 E-value=6.5e-22 Score=166.15 Aligned_cols=145 Identities=10% Similarity=0.110 Sum_probs=122.1
Q ss_pred CCccccCCCCCcEEecCC-------------C--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCC
Q 025522 67 VSEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV 131 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~-------------G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv 131 (251)
+..++|+.+|+|++.|.+ | +.++++++ +++++||.|+|+.|||+|+.+++.|+++++++.+.|+
T Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v 80 (195)
T 2bmx_A 2 PLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDA 80 (195)
T ss_dssp CBCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTE
T ss_pred CcCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 456889999999999988 7 89999998 4556666666699999999999999999999998999
Q ss_pred EEEEEeCCCHHHHHHHHHHh----CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCc
Q 025522 132 ALVLIGPGSVEQARTFSEQT----KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDT 206 (251)
Q Consensus 132 ~vVaVs~~~~~~~~~f~~~~----~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~ 206 (251)
++|+|+.++.+.+++|++++ +++| +++|++..++++||+... .
T Consensus 81 ~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~------------------------------- 128 (195)
T 2bmx_A 81 QILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-D------------------------------- 128 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-T-------------------------------
T ss_pred EEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-C-------------------------------
Confidence 99999999999999999998 8999 999999999999987642 0
Q ss_pred CCCCccccceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 207 VSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 207 ~~g~~~q~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+...|.+||+|++ |+|++.+.+....+ .+.++++++++
T Consensus 129 ----g~~~P~~~lid~~-G~i~~~~~g~~~~~-~~~~~l~~~l~ 166 (195)
T 2bmx_A 129 ----GVADRVTFIVDPN-NEIQFVSATAGSVG-RNVDEVLRVLD 166 (195)
T ss_dssp ----SSBCEEEEEECTT-SBEEEEEEECTTCC-CCHHHHHHHHH
T ss_pred ----CCccceEEEEcCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 0135689999998 69999998755333 36788887764
No 40
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.88 E-value=6.2e-22 Score=166.53 Aligned_cols=144 Identities=12% Similarity=0.105 Sum_probs=121.8
Q ss_pred ccccCCCCCcEEecC-CC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH
Q 025522 69 EDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~-~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~ 145 (251)
..+|+.+|+|++.|. +| +.++|+++ +++++||.|+++.||++|+.+++.|+++++++++.|++||+|+.++.+..+
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 83 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHL 83 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 578999999999998 88 99999998 455656655559999999999999999999999999999999999999999
Q ss_pred HHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceE
Q 025522 146 TFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 217 (251)
Q Consensus 146 ~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 217 (251)
+|++++ +++| +++|++.++.++||+.... .+...|++
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~-----------------------------------~~~~~P~~ 128 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTD-----------------------------------EGIAYRGL 128 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETT-----------------------------------TTEECEEE
T ss_pred HHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCC-----------------------------------CCceeeEE
Confidence 999887 8899 9999999999999976421 01246789
Q ss_pred EEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 218 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||+|++ |+|++.+.+.... ..++++++++++
T Consensus 129 ~lid~~-G~i~~~~~g~~~~-~~~~~e~l~~l~ 159 (197)
T 1qmv_A 129 FIIDGK-GVLRQITVNDLPV-GRSVDEALRLVQ 159 (197)
T ss_dssp EEECTT-SBEEEEEEECTTB-CCCHHHHHHHHH
T ss_pred EEECCC-CcEEEEEeCCCCC-CCCHHHHHHHHH
Confidence 999998 6999999875443 457888888764
No 41
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.88 E-value=8.7e-22 Score=169.59 Aligned_cols=145 Identities=11% Similarity=0.093 Sum_probs=121.5
Q ss_pred CccccCCCCCcEEec---CCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHH
Q 025522 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d---~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~ 144 (251)
...+|+.+|+|++.+ .+|+.++|+++ +++++||.|+|+.|||+|+.+++.|++++++|++.|++||+|+.++.+..
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 468899999999974 57899999998 45666666666999999999999999999999999999999999999999
Q ss_pred HHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 145 RTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 145 ~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
++|++++ +++| +++|++.+++++||+.... .+...|+
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~-----------------------------------~g~~~P~ 149 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEG-----------------------------------PGLALRG 149 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETT-----------------------------------TTEECEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecC-----------------------------------CCcccce
Confidence 9999887 7899 9999999999999986521 0134678
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+||||++ |+|+|.+.+. .....+.++++++++
T Consensus 150 ~~liD~~-G~I~~~~~g~-~~~~~~~~ell~~l~ 181 (220)
T 1zye_A 150 LFIIDPN-GVIKHLSVND-LPVGRSVEETLRLVK 181 (220)
T ss_dssp EEEECTT-SBEEEEEEEC-TTCCCCHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecC-CCCCCCHHHHHHHHH
Confidence 9999998 6999999875 334457888887764
No 42
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.88 E-value=3.3e-22 Score=182.44 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=116.1
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhC
Q 025522 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (251)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~ 152 (251)
.++|+|+|.|.+|+.++|+|+ +++++||.||+..|||.|..|+++|++. ...|++||+||.|+.+.+++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 579999999999999999998 5678899999999999999999999753 33589999999999999999999999
Q ss_pred Cce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCeEEEEE
Q 025522 153 FKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIH 231 (251)
Q Consensus 153 ~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~~h 231 (251)
++| +++|++.++.++||+.... ...+++||||++ |+|++.|
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~-------------------------------------~~~r~tfiId~~-G~i~~~~ 118 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENG-------------------------------------KTVRSTFLIDRW-GFVRKEW 118 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETT-------------------------------------EECCEEEEECTT-SBEEEEE
T ss_pred CceEEEEcCchHHHHhcCCCCCC-------------------------------------cCccEEEEECCC-CEEEEEE
Confidence 999 9999999999999975310 124689999998 6999999
Q ss_pred eCCCCCCCCCHHHHHHHhh
Q 025522 232 RDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 232 ~~~~~~D~~~~~eIL~al~ 250 (251)
+.-.+.+|++ |||++++
T Consensus 119 ~~v~~~~h~~--~~l~~~~ 135 (322)
T 4eo3_A 119 RRVKVEGHVQ--EVKEALD 135 (322)
T ss_dssp ESCCSTTHHH--HHHHHHH
T ss_pred eCCCccccHH--HHHHHHh
Confidence 9988888765 8887764
No 43
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.88 E-value=9.7e-22 Score=169.36 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=120.0
Q ss_pred CccccCCCCCcEEecC---CCCeEeCCCccCCCcEEEEEEc-cCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH
Q 025522 68 SEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~---~G~~v~ls~l~~~~~vVLvF~R-~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~ 143 (251)
..++|+.+|+|++.+. +|+.++|+++ +++ ++|++|| ..||++|+.+++.|+++++++++.|++||+|+.|+.+.
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 4688999999999954 5699999998 444 5555555 59999999999999999999999999999999999999
Q ss_pred HHHHHHHh-------CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccc
Q 025522 144 ARTFSEQT-------KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQG 215 (251)
Q Consensus 144 ~~~f~~~~-------~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~g 215 (251)
.++|+++. +++| +++|++..+.++||+.... .+...|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~-----------------------------------~g~~~P 161 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEE-----------------------------------DGNAFR 161 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTT-----------------------------------TSSBCE
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecC-----------------------------------CCCccc
Confidence 99999886 8999 9999999999999986421 012367
Q ss_pred eEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 216 GIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 216 g~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
.+||||++ |+|++.+.+....+ ..+++++++++
T Consensus 162 ~~~lID~~-G~I~~~~~g~~~~~-~~~~~il~~l~ 194 (222)
T 3ztl_A 162 GLFIIDPN-GILRQITINDKPVG-RSVDETLRLLD 194 (222)
T ss_dssp EEEEECTT-SEEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred eEEEECCC-CeEEEEEecCCCCC-CCHHHHHHHHH
Confidence 89999998 69999999865543 34888888774
No 44
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.87 E-value=9.5e-22 Score=173.74 Aligned_cols=145 Identities=14% Similarity=0.103 Sum_probs=122.7
Q ss_pred ccccCCCCCcEEecCCCCeEeC-CCcc-CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~l-s~l~-~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~ 146 (251)
..+|+.+|+|++.+.+| .++| +++. +++++||+||++.|||+|..+++.|++++++|++.|++||+|+.|+.+...+
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 46899999999999999 7999 9975 5677899999999999999999999999999999999999999999988888
Q ss_pred HHHH------hCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 147 FSEQ------TKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 147 f~~~------~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
|.+. .+++| +++|+++++.++||+..... +....+++||
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~----------------------------------g~~~~p~~fI 129 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES----------------------------------ATHTVRGVFI 129 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC----------------------------------SSSCCEEEEE
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccC----------------------------------CCcccceEEE
Confidence 8875 48999 99999999999999864210 0124679999
Q ss_pred EcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 220 AGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||++ |+|++.+.+....+ .+.+||++++.
T Consensus 130 ID~d-G~I~~~~~~~~~~g-r~~~Ellr~I~ 158 (249)
T 3a2v_A 130 VDAR-GVIRTMLYYPMELG-RLVDEILRIVK 158 (249)
T ss_dssp ECTT-SBEEEEEEECTTBC-CCHHHHHHHHH
T ss_pred ECCC-CeEEEEEecCCccc-chhHHHHHHHH
Confidence 9998 69999998754422 36788887764
No 45
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.87 E-value=1.3e-21 Score=164.58 Aligned_cols=143 Identities=10% Similarity=0.057 Sum_probs=121.0
Q ss_pred cccCCCCCcEEecC--CCC---eEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHH
Q 025522 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (251)
Q Consensus 70 ~~g~~ap~f~l~d~--~G~---~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~ 144 (251)
.+|+.+|+|++.|. +|+ .++++++++++++||.|+++.||++|+.+++.|+++++++.+.|+++|+|+.|+.+.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 57999999999998 899 9999998566666666666999999999999999999999999999999999999999
Q ss_pred HHHHHH-------hCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 145 RTFSEQ-------TKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 145 ~~f~~~-------~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
++|+++ ++++| +++|++.+++++||+.... | ...|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~------------------g------------------~~~P~ 125 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE------------------A------------------IALRG 125 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT------------------T------------------EECEE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC------------------C------------------cccce
Confidence 999998 89999 9999999999999976420 0 23568
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+||+|++ |+|++.+.+... ...+.+++++++.
T Consensus 126 ~~lid~~-G~i~~~~~g~~~-~~~~~~~l~~~l~ 157 (198)
T 1zof_A 126 AFLIDKN-MKVRHAVINDLP-LGRNADEMLRMVD 157 (198)
T ss_dssp EEEEETT-TEEEEEEEESSS-CCCHHHHHHHHHH
T ss_pred EEEECCC-CEEEEEEecCCC-CCCCHHHHHHHHH
Confidence 9999998 699999987433 3456778877653
No 46
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.87 E-value=5.5e-21 Score=152.19 Aligned_cols=136 Identities=14% Similarity=0.127 Sum_probs=117.3
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f 147 (251)
.++|+.+|+|++.| +|+.++++++ .++.+|++|++.||+.|+.+++.|.++++++.+.|+.+|+|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK--TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG--TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999998 45567777779999999999999999999999999999999998 56789999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
.++++++| ++.|++..+.+.||+.. .|..||+|++ |+
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~ 117 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVKG-----------------------------------------MPTSFLIDRN-GK 117 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-SB
T ss_pred HHHcCCCCceeECCcchhHHHcCCCC-----------------------------------------CCeEEEECCC-CC
Confidence 99999999 99999988888877532 3468999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025522 227 ISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|++.+.+....+..++++.|+.+
T Consensus 118 i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 118 VLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp EEEEEESCCTTTHHHHHHHHHHH
T ss_pred EEEEEccCCCcCHHHHHHHHHHH
Confidence 99999987666666666666654
No 47
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.86 E-value=2.9e-21 Score=165.58 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=109.8
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------C
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~--------~ 139 (251)
..++|+.+|+|++.|.+|+.++++++ ++++++|++|++.|||+|+.+++.|+++++++++.|+.+|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 46789999999999999999999998 45557888999999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEE
Q 025522 140 SVEQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGII 218 (251)
Q Consensus 140 ~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~f 218 (251)
+.+.+++|+++++++| +++|++..+.++||+.. .|..|
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~-----------------------------------------~P~~~ 148 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAAC-----------------------------------------TPDFF 148 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCE-----------------------------------------ESEEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCCC-----------------------------------------CCeEE
Confidence 7899999999999999 99999998888887542 24689
Q ss_pred EEcCCCCeEEEEEeC
Q 025522 219 VAGPGKSNISYIHRD 233 (251)
Q Consensus 219 Vid~ggg~I~~~h~~ 233 (251)
|+|++ |+|+|....
T Consensus 149 liD~~-G~i~~~g~~ 162 (218)
T 3u5r_E 149 LYDRE-RRLVYHGQF 162 (218)
T ss_dssp EECTT-CBEEEEECS
T ss_pred EECCC-CcEEEeccc
Confidence 99998 699987654
No 48
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=6.7e-21 Score=152.01 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=119.0
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC--HHHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTF 147 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~--~~~~~~f 147 (251)
.+|+.+|+|++.|.+|+.++++++ .++.+|++|++.||+.|+.+++.|.++++++.+.++.+++|+.+. .+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDL--KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 679999999999999999999998 445666777799999999999999999999998999999999987 6789999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
+++++++| ++.|++..+.+.||+.. .|.+||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~ 118 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTTG-----------------------------------------VPETFVIDRH-GV 118 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCCS-----------------------------------------BCEEEEECTT-SB
T ss_pred HHHcCCCeeEEecCchHHHHHhCCCC-----------------------------------------CCeEEEECCC-Cc
Confidence 99999999 99999988888877532 3469999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025522 227 ISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|++.+.+....+.+++.+.|+.+
T Consensus 119 i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 119 ILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp EEEEEESCCCTTSHHHHHHHHTC
T ss_pred EEEEEcCCCccccHHHHHHHHHH
Confidence 99999998777777777777765
No 49
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.85 E-value=2.4e-20 Score=147.09 Aligned_cols=129 Identities=13% Similarity=0.117 Sum_probs=107.9
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHH---cHHHHHHcCCEEEEEeCC-CHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~gv~vVaVs~~-~~~~~~ 145 (251)
++|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|.+ +++++++.|+.+|+|+.+ +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 579999999999999999999998 46778888889999999999999998 899999999999999998 568899
Q ss_pred HHHHHhCCce-EEEcCChhHHH--HcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 146 TFSEQTKFKG-VYADPNHSSYE--ALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 146 ~f~~~~~~pf-l~sDp~~~ly~--alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
+|.++++++| ++.|++..+.. .||+. ..|..||+|+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~ 118 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIR-----------------------------------------ATPTIYLLDG 118 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCC-----------------------------------------SSSEEEEECT
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCC-----------------------------------------CCCeEEEECC
Confidence 9999999999 99999877654 33321 2457999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 223 GKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 223 ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+ |+|++. ..+.+++.+.+.
T Consensus 119 ~-G~i~~~--------~~~~~~l~~~l~ 137 (142)
T 3ewl_A 119 R-KRVILK--------DTSMEQLIDYLA 137 (142)
T ss_dssp T-CBEEEC--------SCCHHHHHHHHH
T ss_pred C-CCEEec--------CCCHHHHHHHHH
Confidence 8 699872 245666666553
No 50
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.85 E-value=3e-20 Score=154.59 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=115.2
Q ss_pred CccccCCCCCcEEe-cCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------
Q 025522 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (251)
Q Consensus 68 ~~~~g~~ap~f~l~-d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~-------- 138 (251)
....|+.+|+|++. |.+|+.++++++ ++++.+|++|++.||++|+.+++.|+++++++.+.|+.+|+|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 46789999999999 999999999998 44555788889999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceE
Q 025522 139 GSVEQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 217 (251)
Q Consensus 139 ~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 217 (251)
++.+.+++|+++++++| ++.|++..+.+.||+.. .|..
T Consensus 96 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~ 134 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFPYLYDETQEVAKAYDAAC-----------------------------------------TPDF 134 (196)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCE-----------------------------------------ESEE
T ss_pred cCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCC-----------------------------------------CCeE
Confidence 67889999999999999 99999988888876532 3468
Q ss_pred EEEcCCCCeEEEEEeCCCC----CCCCCHHHHHHHh
Q 025522 218 IVAGPGKSNISYIHRDKEA----GDDPDIQDILKAC 249 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~----~D~~~~~eIL~al 249 (251)
||+|++ |+|+|.+...+. ....+.+++.+++
T Consensus 135 ~lid~~-G~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 135 YIFDRD-LKCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp EEEETT-CBEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred EEEcCC-CeEEEccccCcccccccCccCHHHHHHHH
Confidence 999998 699999875432 2233445555544
No 51
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.84 E-value=1.7e-20 Score=151.50 Aligned_cols=145 Identities=10% Similarity=0.068 Sum_probs=121.1
Q ss_pred cccCCCCCCCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 58 SAVSESPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 58 ~~~~~~~~~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
++...........+|+.+|+|++.|.+|+.++++++ .++.+|++|++.||+.|+.+++.|.++++++.+.++.+|+|+
T Consensus 4 ~~~~~~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~ 81 (158)
T 3hdc_A 4 APGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQY--RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVN 81 (158)
T ss_dssp CCCCCCCCSCCCCTTSBCCCCEEECTTSCEEESGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEE
T ss_pred cccccccCCcccCCCCcCCCceeEcCCCCEEehHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEe
Confidence 333334455667899999999999999999999998 445666777799999999999999999999988899999999
Q ss_pred CCCHHHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 138 PGSVEQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 138 ~~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
.+. ..++|.++.+++| ++.|++..+.+.||+.. .|.
T Consensus 82 ~d~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~ 118 (158)
T 3hdc_A 82 VEK--RFPEKYRRAPVSFNFLSDATGQVQQRYGANR-----------------------------------------LPD 118 (158)
T ss_dssp CSS--SCCGGGGGCCCSCEEEECTTSHHHHHTTCCS-----------------------------------------SSE
T ss_pred CCH--HHHHHHHHcCCCceEEECchHHHHHHhCCCC-----------------------------------------cce
Confidence 988 5788999999999 99999988888877532 346
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHH
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKA 248 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~a 248 (251)
.||+|++ |+|++.+.+....|.+++.+-++.
T Consensus 119 ~~lid~~-G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 119 TFIVDRK-GIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp EEEECTT-SBEEEEEESCCCTTSHHHHHHHHT
T ss_pred EEEEcCC-CCEEEEEeCCCccchHHHHHHHHh
Confidence 8999998 699999999888877766555543
No 52
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.84 E-value=3e-20 Score=153.58 Aligned_cols=143 Identities=15% Similarity=0.215 Sum_probs=117.8
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH--HHH
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQA 144 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~--~~~ 144 (251)
.....|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+.++.+|+|+.+.. +.+
T Consensus 32 ~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~ 109 (186)
T 1jfu_A 32 TMASAPLKLPDLAFEDADGKPKKLSDF--RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKP 109 (186)
T ss_dssp EECCSCCBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHH
T ss_pred ccccCCCcCCCcEeEcCCCCEeeHHHc--CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHH
Confidence 456789999999999999999999998 4567777778999999999999999999999888999999999864 788
Q ss_pred HHHHHHhCCc-e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 145 RTFSEQTKFK-G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 145 ~~f~~~~~~p-f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
++|+++++++ | ++.|++..+++.||+.... ...|.+||+|+
T Consensus 110 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------------------------------~~~P~~~lid~ 152 (186)
T 1jfu_A 110 KTFLKEANLTRLGYFNDQKAKVFQDLKAIGRA-------------------------------------LGMPTSVLVDP 152 (186)
T ss_dssp HHHHHHTTCCTTCCEECTTCHHHHHHHTTTCC-------------------------------------SSSSEEEEECT
T ss_pred HHHHHHcCCCCCceEECCcchHHHHhcccccc-------------------------------------CCCCEEEEECC
Confidence 9999999995 7 9999999988888765210 12468999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 223 GKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 223 ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+ |+|++.|.+....+..++.+.|+.+
T Consensus 153 ~-G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 153 Q-GCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp T-SBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred C-CCEEEEEecCCccCHHHHHHHHHHH
Confidence 8 6999999886544445555555544
No 53
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.84 E-value=1.3e-19 Score=149.54 Aligned_cols=136 Identities=19% Similarity=0.235 Sum_probs=113.2
Q ss_pred CccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCC------EEEEEeCC
Q 025522 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPG 139 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv------~vVaVs~~ 139 (251)
.++.|+.+|+|++.|. +|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+.|+ .+|+|+.+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDF--ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHHHh--CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 4678999999999999 9999999998 456777778899999999999999999999999999 99999998
Q ss_pred C--HHHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 140 S--VEQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 140 ~--~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
+ .+.+++|+++++++| ++.|++..+.+.||...- ...|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v--------------------------------------~~~P~ 149 (183)
T 3lwa_A 108 DYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPA--------------------------------------SVIPT 149 (183)
T ss_dssp CCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCT--------------------------------------TCCSE
T ss_pred CCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCC--------------------------------------CCCCe
Confidence 7 789999999999999 999999887777752110 12467
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+||+|++ |+|++.|.+. .+.+++.+.+
T Consensus 150 ~~lid~~-G~i~~~~~g~-----~~~~~l~~~l 176 (183)
T 3lwa_A 150 TIVLDKQ-HRPAAVFLRE-----VTSKDVLDVA 176 (183)
T ss_dssp EEEECTT-SCEEEEECSC-----CCHHHHHHHH
T ss_pred EEEECCC-CcEEEEEcCC-----CCHHHHHHHH
Confidence 9999998 6999988863 3456665544
No 54
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.84 E-value=3.5e-20 Score=146.98 Aligned_cols=121 Identities=9% Similarity=-0.032 Sum_probs=97.7
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHH
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQAR 145 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~ 145 (251)
...++|+.+|+|++ |.+|+.++++++ .++++|++||+.||++|+.+++.|+++++++.+.|+.+|+|+.+ +.+..+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQ--LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFT 81 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCS--SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHH
Confidence 45789999999999 999999999998 45778889999999999999999999999999889999999998 557899
Q ss_pred HHHHHhCCce--EEEcCC---hhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 146 TFSEQTKFKG--VYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 146 ~f~~~~~~pf--l~sDp~---~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
+|+++++++| +++|.+ ..+++.||+. ..|.+||+
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 120 (143)
T 4fo5_A 82 ETVKIDKLDLSTQFHEGLGKESELYKKYDLR-----------------------------------------KGFKNFLI 120 (143)
T ss_dssp HHHHHHTCCGGGEEECTTGGGSHHHHHTTGG-----------------------------------------GCCCEEEE
T ss_pred HHHHHhCCCCceeeecccccchHHHHHcCCC-----------------------------------------CCCcEEEE
Confidence 9999999998 888874 3444444322 24579999
Q ss_pred cCCCCeEEEEEe
Q 025522 221 GPGKSNISYIHR 232 (251)
Q Consensus 221 d~ggg~I~~~h~ 232 (251)
|++ |+|++.+.
T Consensus 121 d~~-G~i~~~~~ 131 (143)
T 4fo5_A 121 NDE-GVIIAANV 131 (143)
T ss_dssp CTT-SBEEEESC
T ss_pred CCC-CEEEEccC
Confidence 998 69998764
No 55
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.83 E-value=9.7e-20 Score=144.27 Aligned_cols=130 Identities=9% Similarity=0.047 Sum_probs=107.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHH---cHHHHHHcCCEEEEEeCCCH-HHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQA 144 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~gv~vVaVs~~~~-~~~ 144 (251)
..+|+.+|+|++.|.+|+.++++++ .++.+|++||+.||++|+.+++.|.+ +++++++.|+.+|+|+.++. +..
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQF--PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEW 82 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTTC--CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHH
T ss_pred hcCCCccCCcEEEcCCCCEeeHHHc--CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHH
Confidence 4689999999999999999999998 44778888889999999999999999 89999999999999999865 788
Q ss_pred HHHHHHhCCce-EEEcCChh--HHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc
Q 025522 145 RTFSEQTKFKG-VYADPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 221 (251)
Q Consensus 145 ~~f~~~~~~pf-l~sDp~~~--ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 221 (251)
++|.+++++++ .+.|++.. +.+.||+ ...|.+||+|
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v-----------------------------------------~~~P~~~lid 121 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDL-----------------------------------------RAIPTLYLLD 121 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCC-----------------------------------------TTCSEEEEEC
T ss_pred HHHHHhcccccccccCccchhhhhhhcCC-----------------------------------------CcCCeEEEEC
Confidence 89999999999 88897754 1111111 1256899999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 222 PGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 222 ~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
++ |+|++.+.+ .++|.+.++
T Consensus 122 ~~-G~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 122 KN-KTVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp TT-CBEEEEEEC--------HHHHHHHHH
T ss_pred CC-CcEEecCCC--------HHHHHHHHh
Confidence 98 699998763 456665554
No 56
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.83 E-value=9.3e-20 Score=145.96 Aligned_cols=132 Identities=19% Similarity=0.248 Sum_probs=109.1
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f 147 (251)
.++|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+.|+.+++|+.+. .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF--KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG--TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 4679999999999999999999998 456677777899999999999999999999998999999999984 5789999
Q ss_pred HHHhCCce-EEEcC---ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCC
Q 025522 148 SEQTKFKG-VYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 223 (251)
Q Consensus 148 ~~~~~~pf-l~sDp---~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 223 (251)
.++++++| ++.|+ +..+.+.||+.. .|..||+|++
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~ 119 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIVG-----------------------------------------FPHIILVDPE 119 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCCS-----------------------------------------SCEEEEECTT
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCCc-----------------------------------------CCeEEEECCC
Confidence 99999999 99998 566666665431 3578999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 224 KSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 224 gg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|+|++.+.. -.++++.|+.+
T Consensus 120 -G~i~~~~~~-----~~~l~~~l~~l 139 (152)
T 2lrn_A 120 -GKIVAKELR-----GDDLYNTVEKF 139 (152)
T ss_dssp -SEEEEECCC-----TTHHHHHHHHH
T ss_pred -CeEEEeeCC-----HHHHHHHHHHH
Confidence 699998742 23455555544
No 57
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.83 E-value=1.8e-19 Score=143.72 Aligned_cols=120 Identities=20% Similarity=0.260 Sum_probs=104.4
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFS 148 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~ 148 (251)
++|+.+|+|++.|.+|+.++++++ .++.+|++|++.||++|+.+++.|.++++++.+.++.+++|+.+ +.+.+++|+
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDL--KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 368899999999999999999998 44566667779999999999999999999999899999999986 568899999
Q ss_pred HHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCeE
Q 025522 149 EQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNI 227 (251)
Q Consensus 149 ~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I 227 (251)
++++++| ++.|++..+++.||+.. .|..||+|++ |++
T Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G~i 116 (151)
T 2f9s_A 79 KSYGVNFPVVLDTDRQVLDAYDVSP-----------------------------------------LPTTFLINPE-GKV 116 (151)
T ss_dssp HHHTCCSCEEEETTSHHHHHTTCCS-----------------------------------------SCEEEEECTT-SEE
T ss_pred HHcCCCceEEECCchHHHHhcCCCC-----------------------------------------CCeEEEECCC-CcE
Confidence 9999999 99999988888877531 3468999998 699
Q ss_pred EEEEeC
Q 025522 228 SYIHRD 233 (251)
Q Consensus 228 ~~~h~~ 233 (251)
++.+.+
T Consensus 117 ~~~~~G 122 (151)
T 2f9s_A 117 VKVVTG 122 (151)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 998886
No 58
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.83 E-value=6.4e-20 Score=147.11 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=103.3
Q ss_pred ccCCCCCcEEec--CCCCeEeCCCccCCCcEEEEEEccCCChhhHHH-HHHHHHcHHHHHHcCCEEEEEeC-------CC
Q 025522 71 TKNLLDTVKVYD--VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (251)
Q Consensus 71 ~g~~ap~f~l~d--~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~gv~vVaVs~-------~~ 140 (251)
.|+.+|+|++.| .+|+.++++++ .++++|++|++.||++|+.+ ++.|+++++++.+.|+.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 578999999999 48999999998 46778888889999999997 99999999999888999999995 57
Q ss_pred HHHHHHHHHHhCCce-EEEcCCh-----hHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 141 VEQARTFSEQTKFKG-VYADPNH-----SSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 141 ~~~~~~f~~~~~~pf-l~sDp~~-----~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
.+.+++|+++++++| ++.|++. .+++.||+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~-----------------------------------------~~ 118 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR-----------------------------------------GT 118 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC-----------------------------------------SS
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC-----------------------------------------CC
Confidence 899999999999999 9999887 455555532 14
Q ss_pred ceEEEEcCCCCeEEEEEeCC
Q 025522 215 GGIIVAGPGKSNISYIHRDK 234 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~~ 234 (251)
|.+||+|++ |+|++.+.+.
T Consensus 119 P~~~lid~~-G~i~~~~~g~ 137 (158)
T 3eyt_A 119 PSLLLIDKA-GDLRAHHFGD 137 (158)
T ss_dssp SEEEEECTT-SEEEEEEESC
T ss_pred CEEEEECCC-CCEEEEEeCC
Confidence 579999998 6999999873
No 59
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=7.9e-20 Score=146.09 Aligned_cols=121 Identities=10% Similarity=-0.007 Sum_probs=105.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCcEEEEEEccCCChh--hHHHHHHHHHcHHHH-HHcCCEEEEEeCCCH-
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls--~l~~~~~vVLvF~R~~~Cp~--C~~el~~L~~~~~~~-~~~gv~vVaVs~~~~- 141 (251)
..++|+.+|+|++.|.+|+.++++ ++ .++++|++|++.||++ |+.+++.|.++++++ +..|+.+|+|+.++.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 467899999999999999999999 88 4567888888999999 999999999999999 888999999999865
Q ss_pred HHHHHHHHHhCCce-EEEcC---ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceE
Q 025522 142 EQARTFSEQTKFKG-VYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGI 217 (251)
Q Consensus 142 ~~~~~f~~~~~~pf-l~sDp---~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~ 217 (251)
+..++|+++++++| ++.|+ +..+.+.||+.. .|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----------------------------------------~P~~ 120 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYK-----------------------------------------IPAN 120 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS-----------------------------------------SSEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCc-----------------------------------------cCeE
Confidence 79999999999999 99998 456666665431 3579
Q ss_pred EEEcCCCCeEEEEEe
Q 025522 218 IVAGPGKSNISYIHR 232 (251)
Q Consensus 218 fVid~ggg~I~~~h~ 232 (251)
||+|++ |+|++.+.
T Consensus 121 ~lid~~-G~i~~~~~ 134 (150)
T 3fw2_A 121 ILLSSD-GKILAKNL 134 (150)
T ss_dssp EEECTT-SBEEEESC
T ss_pred EEECCC-CEEEEccC
Confidence 999998 69999884
No 60
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.83 E-value=8.3e-20 Score=148.68 Aligned_cols=152 Identities=12% Similarity=0.164 Sum_probs=116.5
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCCh-hhHHHHHHHHHcHHHHHHcC--CEEEEEeCC----C
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----S 140 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~~g--v~vVaVs~~----~ 140 (251)
...+|+.+|+|++.|.+|+.++++++ .++++|++|++.||+ +|+.+++.|.++++++++.| ++||+|+.+ +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL--KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG--TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc--CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 46789999999999999999999998 456677788899999 99999999999999999887 999999986 6
Q ss_pred HHHHHHHHHHhCCce----EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 141 VEQARTFSEQTKFKG----VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 141 ~~~~~~f~~~~~~pf----l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
.+.+++|+++++++| +++|++.++.+.|++..... . +. ......+....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~-~----------------~~--------~~~~~~~~~~~p~ 138 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKA-I----------------VK--------KPEGEDQVIHQSS 138 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCC-C----------------CC--------CCSSCCSCCSCCE
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCe-e----------------Ee--------ecCCCCeeeeeeE
Confidence 789999999998876 68899988888776421000 0 00 0000001134678
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+||||++ |+|++.|.+... .+.++|++.++
T Consensus 139 ~~lid~~-G~i~~~~~g~~~---~~~~~l~~~l~ 168 (174)
T 1xzo_A 139 FYLVGPD-GKVLKDYNGVEN---TPYDDIISDVK 168 (174)
T ss_dssp EEEECTT-SEEEEEEESSSS---CCHHHHHHHHH
T ss_pred EEEECCC-CeEEEEEcCCCC---CCHHHHHHHHH
Confidence 9999998 699999987543 34566666553
No 61
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.83 E-value=3.1e-20 Score=146.37 Aligned_cols=133 Identities=14% Similarity=0.050 Sum_probs=113.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~ 146 (251)
...+|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|.++++++.+.|+.+|+|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV--QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC--CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 35789999999999999999999998 45677778889999999999999999999999999999999998 5589999
Q ss_pred HHHHhCCc-e-EEEcCChh--HHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 147 FSEQTKFK-G-VYADPNHS--SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 147 f~~~~~~p-f-l~sDp~~~--ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
|.++++++ | ++.|++.. +.+.||+.. .|..||+|+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~-----------------------------------------~P~~~lid~ 120 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIYA-----------------------------------------TPVLYVLDK 120 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCCS-----------------------------------------SCEEEEECT
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcCC-----------------------------------------CCEEEEECC
Confidence 99999999 7 99998876 666665421 357899999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 223 GKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 223 ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+ |+|++.+.+. .+++++++.+
T Consensus 121 ~-G~i~~~~~g~-----~~~~~~l~~l 141 (148)
T 3hcz_A 121 N-KVIIAKRIGY-----ENLDDFLVQY 141 (148)
T ss_dssp T-CBEEEESCCG-----GGHHHHHHHH
T ss_pred C-CcEEEecCCH-----HHHHHHHHHH
Confidence 8 6999887642 6777777665
No 62
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.82 E-value=9.2e-20 Score=151.15 Aligned_cols=97 Identities=10% Similarity=0.104 Sum_probs=85.7
Q ss_pred CCCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-----
Q 025522 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (251)
Q Consensus 65 ~~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----- 139 (251)
+....+.|+.+|+|++.|.+|+.++++++ .++++|++|++.|||+|+.+++.|+++++++.+.|+++|+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 94 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHc--CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCC
Confidence 45567899999999999999999999998 45678888899999999999999999999999999999999974
Q ss_pred ---CHHHHHHHHHHhCCce-EEE--cCChh
Q 025522 140 ---SVEQARTFSEQTKFKG-VYA--DPNHS 163 (251)
Q Consensus 140 ---~~~~~~~f~~~~~~pf-l~s--Dp~~~ 163 (251)
+.+.+++|+++++++| ++. |.+..
T Consensus 95 e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp CCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 6789999999999999 886 66543
No 63
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.82 E-value=4.4e-19 Score=146.73 Aligned_cols=121 Identities=13% Similarity=0.041 Sum_probs=103.7
Q ss_pred CCCccccCCCCCcEEecCCC--CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe-CCCHH
Q 025522 66 SVSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVE 142 (251)
Q Consensus 66 ~~~~~~g~~ap~f~l~d~~G--~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs-~~~~~ 142 (251)
.....+|+.+|+|++.|.+| +.++++++ .++++|++|++.||++|+.+++.|++++++ |+.+|+|+ .++.+
T Consensus 27 ~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~ 100 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPSVQDPARRLTEADL--KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNA 100 (176)
T ss_dssp STTTTTTSBCCCCEEEBSSCTTSEEEGGGG--CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHH
T ss_pred ccccccCCcCCCcEecccCCCCceecHHHh--CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHH
Confidence 34578899999999999999 89999998 345667777799999999999999998765 89999999 57778
Q ss_pred HHHHHHHHhCCce--EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 143 QARTFSEQTKFKG--VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 143 ~~~~f~~~~~~pf--l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
..++|+++++++| ++.|++..+.+.||+.. .|.+||+
T Consensus 101 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 139 (176)
T 3kh7_A 101 AAIKWLNELHNPYLLSISDADGTLGLDLGVYG-----------------------------------------APETYLI 139 (176)
T ss_dssp HHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-----------------------------------------SCEEEEE
T ss_pred HHHHHHHHcCCCCceEEECCcchHHHHcCCCC-----------------------------------------CCeEEEE
Confidence 9999999999999 79999988888877542 3469999
Q ss_pred cCCCCeEEEEEeCC
Q 025522 221 GPGKSNISYIHRDK 234 (251)
Q Consensus 221 d~ggg~I~~~h~~~ 234 (251)
|++ |+|++.+.+.
T Consensus 140 d~~-G~i~~~~~g~ 152 (176)
T 3kh7_A 140 DKQ-GIIRHKIVGV 152 (176)
T ss_dssp CTT-CBEEEEEESC
T ss_pred CCC-CeEEEEEcCC
Confidence 998 6999999874
No 64
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.82 E-value=1e-19 Score=145.97 Aligned_cols=120 Identities=19% Similarity=0.208 Sum_probs=105.4
Q ss_pred ccCCCCCcEEec-CCCCeEeCCCccCCCcEEEEEEccCCChhhHHH-HHHHHHcHHHHHHcCCEEEEEeC-------CCH
Q 025522 71 TKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GSV 141 (251)
Q Consensus 71 ~g~~ap~f~l~d-~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~gv~vVaVs~-------~~~ 141 (251)
.|..+|+|++.| .+|+.++++++ .++++|++|++.||++|+.+ ++.|+++++++.+.|+.+|+|+. ++.
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~ 82 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTP 82 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCcccccccCCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCH
Confidence 688999999999 89999999998 46788888889999999996 99999999999989999999997 688
Q ss_pred HHHHHHHHHhCCce-EEEcCChh------HHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 142 EQARTFSEQTKFKG-VYADPNHS------SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 142 ~~~~~f~~~~~~pf-l~sDp~~~------ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
+.+++|+++++++| ++.|++.. +++.||+.. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~-----------------------------------------~ 121 (160)
T 3lor_A 83 EALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEG-----------------------------------------T 121 (160)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCS-----------------------------------------S
T ss_pred HHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCc-----------------------------------------c
Confidence 99999999999999 99999876 666665421 3
Q ss_pred ceEEEEcCCCCeEEEEEeCC
Q 025522 215 GGIIVAGPGKSNISYIHRDK 234 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~~ 234 (251)
|..||+|++ |+|++.+.+.
T Consensus 122 P~~~lid~~-G~i~~~~~g~ 140 (160)
T 3lor_A 122 PSIILADRK-GRIRQVQFGQ 140 (160)
T ss_dssp SEEEEECTT-SBEEEEEESC
T ss_pred ceEEEECCC-CcEEEEecCc
Confidence 568999998 6999998874
No 65
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.82 E-value=2.6e-19 Score=142.62 Aligned_cols=131 Identities=12% Similarity=0.169 Sum_probs=110.3
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe--CCCHHHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs--~~~~~~~~~f 147 (251)
..|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++...|+.+++|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL--QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH--TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 468999999999999999999998 445666677799999999999999999999999999999999 5677899999
Q ss_pred HHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCe
Q 025522 148 SEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSN 226 (251)
Q Consensus 148 ~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~ 226 (251)
+++++++| ++.|++..+.+.||+.. .|..||+|++ |+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~lid~~-G~ 118 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQV-----------------------------------------YPTSVLIGKK-GE 118 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCCS-----------------------------------------SSEEEEECSS-SC
T ss_pred HHHcCCCceEEcCchHHHHHHcCCCc-----------------------------------------cCeEEEECCC-Cc
Confidence 99999999 99999988887776532 3468999998 69
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHh
Q 025522 227 ISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 227 I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|++.+.+ ..+.+++++.+
T Consensus 119 i~~~~~g-----~~~~~~l~~~l 136 (153)
T 2l5o_A 119 ILKTYVG-----EPDFGKLYQEI 136 (153)
T ss_dssp CCEEEES-----SCCHHHHHHHH
T ss_pred EEEEEcC-----CCCHHHHHHHH
Confidence 9988876 24566666554
No 66
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.81 E-value=4.7e-19 Score=146.84 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=90.9
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------C
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~--------~ 139 (251)
..+.|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+. +.+|+|+. +
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF--HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC--CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 46789999999999999999999998 4467777778999999999999999999999887 99999998 5
Q ss_pred CHHHHHHHHHHhCCce-EEEcCChhHHHHcCCc
Q 025522 140 SVEQARTFSEQTKFKG-VYADPNHSSYEALSFV 171 (251)
Q Consensus 140 ~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~ 171 (251)
+.+.+++|+++++++| ++.|++..+.+.||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 115 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRAL 115 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCC
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCCC
Confidence 7789999999999999 9999999888888753
No 67
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.81 E-value=8.1e-20 Score=151.62 Aligned_cols=91 Identities=8% Similarity=0.125 Sum_probs=78.7
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-------
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~------- 139 (251)
...++|+.+|+|++.|.+|+.++++++ .++++|++||+.|||+|+.+++.|+++++++.+.|++||+|+.+
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~ 98 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEP 98 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCC
Confidence 457899999999999999999999998 55788888999999999999999999999999999999999975
Q ss_pred -CHHHHHHHHHH-hCCce-EEEc
Q 025522 140 -SVEQARTFSEQ-TKFKG-VYAD 159 (251)
Q Consensus 140 -~~~~~~~f~~~-~~~pf-l~sD 159 (251)
+.+.+++|+++ ++++| ++.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~ 121 (181)
T 2p31_A 99 DSNKEIESFARRTYSVSFPMFSK 121 (181)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCC
T ss_pred CCHHHHHHHHHhhcCCCceeEee
Confidence 57899999999 99999 8864
No 68
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.81 E-value=4.5e-19 Score=142.99 Aligned_cols=131 Identities=12% Similarity=0.141 Sum_probs=105.6
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH-HHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~-~~~~~ 146 (251)
....|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+.|+.+|+|+.++. +..++
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDL--KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTG--GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHh--CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHH
Confidence 34678899999999999999999998 4456777777899999999999999999999999999999999865 56677
Q ss_pred HHHHhCCce-EEEcCChh---HHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcC
Q 025522 147 FSEQTKFKG-VYADPNHS---SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGP 222 (251)
Q Consensus 147 f~~~~~~pf-l~sDp~~~---ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ 222 (251)
|.+ +++| ++.|++.. +.+.||+.. .|.+||+|+
T Consensus 86 ~~~--~~~~~~~~d~~~~~~~~~~~~~v~~-----------------------------------------~P~~~lid~ 122 (152)
T 2lrt_A 86 SAD--NLPWVCVRDANGAYSSYISLYNVTN-----------------------------------------LPSVFLVNR 122 (152)
T ss_dssp HHT--TCSSEEEECSSGGGCHHHHHHTCCS-----------------------------------------CSEEEEEET
T ss_pred HHh--CCCceEEECCCCcchHHHHHcCccc-----------------------------------------CceEEEECC
Confidence 765 4788 99998876 666655431 357999999
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 223 GKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 223 ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+ |+|++.+.+ ..++++.+..+
T Consensus 123 ~-G~i~~~~~g-----~~~~e~~~~~~ 143 (152)
T 2lrt_A 123 N-NELSARGEN-----IKDLDEAIKKL 143 (152)
T ss_dssp T-TEEEEETTT-----CSCHHHHHHHH
T ss_pred C-CeEEEecCC-----HHHHHHHHHHH
Confidence 8 699998764 35566666544
No 69
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.81 E-value=7.1e-19 Score=137.84 Aligned_cols=133 Identities=12% Similarity=0.145 Sum_probs=108.2
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC----CHH
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVE 142 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----~~~ 142 (251)
.....|+.+|+|++.|.+|+.+++++ +++ .+|++|++.||++|+.+++.|.++++++...++.++.|+.+ +.+
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~--~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 83 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN--KGQ-KTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQ 83 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC--TTS-EEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH--CCC-EEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHH
Confidence 34678999999999999999999999 444 45555559999999999999999999998889999999985 678
Q ss_pred HHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc
Q 025522 143 QARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG 221 (251)
Q Consensus 143 ~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid 221 (251)
.+++|.++++++| ++.|++..+++.||+.. .|..||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid 122 (145)
T 3erw_A 84 VVEDFIKANKLTFPIVLDSKGELMKEYHIIT-----------------------------------------IPTSFLLN 122 (145)
T ss_dssp HHHHHHHHTTCCSCEEECSSSHHHHHTTCCE-----------------------------------------ESEEEEEC
T ss_pred HHHHHHHHcCCceeEEEcCchhHHHhcCcCc-----------------------------------------cCeEEEEc
Confidence 9999999999999 99999998888887532 34689999
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 222 PGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 222 ~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
++ |+|++.+.+. .+.+++.+.+
T Consensus 123 ~~-G~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 123 EK-GEIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp TT-CCEEEEEESC-----CCHHHHHHHH
T ss_pred CC-CcEEEEEcCC-----cCHHHHHHhh
Confidence 98 6999988762 4456666554
No 70
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.81 E-value=3.4e-19 Score=148.33 Aligned_cols=93 Identities=10% Similarity=0.067 Sum_probs=83.9
Q ss_pred CCCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-----
Q 025522 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (251)
Q Consensus 65 ~~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----- 139 (251)
.....+.|+.+|+|++.|.+|+.++++++ .++++|++||+.|||+|+.+++.|+++++++++.|++||+|+.+
T Consensus 19 ~~~~~~~g~~~p~f~l~~~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~ 96 (185)
T 2gs3_A 19 YFQSMRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 96 (185)
T ss_dssp SSGGGGGCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTC
T ss_pred hhhhccCCCCcCCceeEcCCCCEeeHHHc--CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCC
Confidence 44567899999999999999999999998 45788889999999999999999999999999999999999865
Q ss_pred ---CHHHHHHHHHHhCCce-EEEc
Q 025522 140 ---SVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 140 ---~~~~~~~f~~~~~~pf-l~sD 159 (251)
+.+.+++|+++++++| ++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~p~~~~ 120 (185)
T 2gs3_A 97 EPGSNEEIKEFAAGYNVKFDMFSK 120 (185)
T ss_dssp CCSCHHHHHHHHHHTTCCSEEBCC
T ss_pred CCCCHHHHHHHHHHcCCCCeeeee
Confidence 4678999999999999 8873
No 71
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.80 E-value=4.1e-19 Score=139.90 Aligned_cols=121 Identities=10% Similarity=-0.001 Sum_probs=103.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCC--CccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHH-HHcCCEEEEEeCCC-HHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGS-VEQ 143 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls--~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~-~~~gv~vVaVs~~~-~~~ 143 (251)
..++|+.+|+|++.|.+|+.++++ ++ .++.+|++|++.||++|+.+++.|.++++++ ...|+.+++|+.+. .+.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERF--RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTT--TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEecccccc--CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 467899999999999999999999 87 4566777777999999999999999999999 88899999999885 468
Q ss_pred HHHHHHHhCCce-EEEcC---ChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEE
Q 025522 144 ARTFSEQTKFKG-VYADP---NHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIV 219 (251)
Q Consensus 144 ~~~f~~~~~~pf-l~sDp---~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fV 219 (251)
.++|.++++++| ++.|+ +..+.+.||+. ..|..||
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~l 120 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAIL-----------------------------------------TLPTNIL 120 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------------------SSSEEEE
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------------------CcCEEEE
Confidence 999999999999 99998 55666666543 1457899
Q ss_pred EcCCCCeEEEEEe
Q 025522 220 AGPGKSNISYIHR 232 (251)
Q Consensus 220 id~ggg~I~~~h~ 232 (251)
+|++ |+|++.+.
T Consensus 121 id~~-G~i~~~~~ 132 (148)
T 3fkf_A 121 LSPT-GKILARDI 132 (148)
T ss_dssp ECTT-SBEEEESC
T ss_pred ECCC-CeEEEecC
Confidence 9998 69998876
No 72
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.80 E-value=3.7e-19 Score=147.29 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=84.1
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~-------- 138 (251)
.....|..+|+|++.|.+|+.++++++ .++++|++||++|||+|+.+++.|+++++++++.|+.||+|+.
T Consensus 10 ~~~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~ 87 (180)
T 3kij_A 10 FLKPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCC
T ss_pred hhcCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCC
Confidence 345779999999999999999999998 5678999999999999999999999999999999999999995
Q ss_pred CCHHHHHHHHHH-hCCce-EEEcCC
Q 025522 139 GSVEQARTFSEQ-TKFKG-VYADPN 161 (251)
Q Consensus 139 ~~~~~~~~f~~~-~~~pf-l~sDp~ 161 (251)
++.+.+++|+++ ++++| ++.|.+
T Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~~d 112 (180)
T 3kij_A 88 RPSKEVESFARKNYGVTFPIFHKIK 112 (180)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCCCC
T ss_pred CCHHHHHHHHHHhcCCCCceeeeee
Confidence 477899999999 99999 887544
No 73
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.80 E-value=2.3e-18 Score=138.43 Aligned_cols=128 Identities=13% Similarity=0.099 Sum_probs=105.9
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQART 146 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~ 146 (251)
+...|+.+|+|++.|.+|+.++++++ .++.+|++|++.||++|+.+++.|.++++++.+.|+.+|.|+.++ .+.+++
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASL--KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGG--TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHc--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 35789999999999999999999998 445666777799999999999999999999999999999999876 688999
Q ss_pred HHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCC
Q 025522 147 FSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 225 (251)
Q Consensus 147 f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 225 (251)
|+++++++| ++.|.+ .+.+.|+..... +....|..||+|++ |
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------------------------~i~~~P~~~lid~~-G 127 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAFNGYIDG-----------------------------------GITGIPTSFVIDAS-G 127 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHHHTTSTT-----------------------------------CSCSSSEEEEECTT-S
T ss_pred HHHHcCCCCceEecCH-HHHHHHhhhhcc-----------------------------------CCCCCCeEEEECCC-C
Confidence 999999999 998876 666666533210 11236789999998 6
Q ss_pred eEEEEEeCC
Q 025522 226 NISYIHRDK 234 (251)
Q Consensus 226 ~I~~~h~~~ 234 (251)
+|++.+.+.
T Consensus 128 ~i~~~~~g~ 136 (165)
T 3or5_A 128 NVSGVIVGP 136 (165)
T ss_dssp BEEEEECSC
T ss_pred cEEEEEcCC
Confidence 999888763
No 74
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.80 E-value=8.9e-19 Score=141.67 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=81.2
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------C
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~--------~ 140 (251)
.+.|+.+|+|++.|.+|+.++++++ .++++|++|++.|||+|+.+++.|+++++++.+.|+++|+|+.+ +
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred ccCCcccccceeecCCCCCccHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 5789999999999999999999998 45678888889999999999999999999999999999999975 4
Q ss_pred HHHHHHH-HHHhCCce-EEE--cCChh
Q 025522 141 VEQARTF-SEQTKFKG-VYA--DPNHS 163 (251)
Q Consensus 141 ~~~~~~f-~~~~~~pf-l~s--Dp~~~ 163 (251)
.+.+++| .++++++| ++. |.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 6889999 59999999 886 66543
No 75
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.80 E-value=5.9e-19 Score=145.49 Aligned_cols=142 Identities=13% Similarity=0.156 Sum_probs=111.1
Q ss_pred cccCCCC-CcEEecCCCCeEeCCCccCCCcEEEEEEccCCCh-hhHHHHHHHHHcHHHHHH--cCCEEEEEeCC---CHH
Q 025522 70 DTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SVE 142 (251)
Q Consensus 70 ~~g~~ap-~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~--~gv~vVaVs~~---~~~ 142 (251)
.+|+.+| +|++.|.+|+.++++++ .++++|++|+++||| .|..+++.|+++++++.+ .++++|+|+.+ +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~--~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNL--KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHh--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 4789999 99999999999999998 356788889999998 799999999999999975 56999999976 678
Q ss_pred HHHHHHHHhCCce-E----EE-c--CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 143 QARTFSEQTKFKG-V----YA-D--PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 143 ~~~~f~~~~~~pf-l----~s-D--p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
.+++|+++++.++ . +. | ...+++++||+.... . ++ +....
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~------~-----------~~---------------~~~~~ 127 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT------A-----------GN---------------DFIHP 127 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE------E-----------TT---------------EEECC
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec------C-----------CC---------------ccccC
Confidence 9999999998765 2 32 3 335777777765421 0 00 00235
Q ss_pred ceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 215 GGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+.+||||++ |+|++.|.+. .++.++|++++.
T Consensus 128 ~~~~lID~~-G~i~~~~~g~----~~~~~~i~~~l~ 158 (170)
T 3me7_A 128 NVVVVLSPE-LQIKDYIYGV----NYNYLEFVNALR 158 (170)
T ss_dssp CEEEEECTT-SBEEEEEESS----SCCHHHHHHHHH
T ss_pred ceEEEECCC-CeEEEEEeCC----CCCHHHHHHHHH
Confidence 679999998 6999998664 356888887764
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.79 E-value=8e-19 Score=142.06 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=79.9
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------C
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~--------~ 140 (251)
.+.|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++++.|+++|+|+.+ +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF--KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh--CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 4689999999999999999999998 45677888889999999999999999999999999999999974 6
Q ss_pred HHHHHHHHH-HhCCce-EE--EcCChh
Q 025522 141 VEQARTFSE-QTKFKG-VY--ADPNHS 163 (251)
Q Consensus 141 ~~~~~~f~~-~~~~pf-l~--sDp~~~ 163 (251)
.+.+++|++ +++++| ++ .|++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 789999999 789999 87 676653
No 77
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.79 E-value=9e-19 Score=139.80 Aligned_cols=129 Identities=14% Similarity=0.157 Sum_probs=106.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC---CCHHHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~---~~~~~~ 144 (251)
..+.|+.+|+|++.|.+|+.++++++ + +.+|++|++.||++|+.+++.|.++++++ ++.+++|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~--k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S--KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C--SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C--CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 46789999999999999999999997 3 55666667999999999999999999988 999999999 788999
Q ss_pred HHHHHHhCCce-EEEc---CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 145 RTFSEQTKFKG-VYAD---PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 145 ~~f~~~~~~pf-l~sD---p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
++|+++++++| ++.| .+..+++.||+. ..|..||+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~-----------------------------------------~~P~~~li 116 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVL-----------------------------------------GQPWTFVV 116 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------------------SSCEEEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------------------cccEEEEE
Confidence 99999999999 9888 455555554432 24579999
Q ss_pred cCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 221 GPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 221 d~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|++ |+|++.+.+. .+.+++.+.+
T Consensus 117 d~~-G~i~~~~~g~-----~~~~~l~~~l 139 (154)
T 3ia1_A 117 DRE-GKVVALFAGR-----AGREALLDAL 139 (154)
T ss_dssp CTT-SEEEEEEESB-----CCHHHHHHHH
T ss_pred CCC-CCEEEEEcCC-----CCHHHHHHHH
Confidence 998 6999998763 4456666555
No 78
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.79 E-value=2.3e-18 Score=138.59 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=108.3
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChh-hHHHHHHHHHcHHHHHH----cCCEEEEEeCCC----HHHH
Q 025522 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (251)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~----~gv~vVaVs~~~----~~~~ 144 (251)
.+|+|++.|.+|+.++++++ .++++|++|++.||+. |+.+++.|+++++++++ .++++|+|+.+. ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY--LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG--TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc--CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 58999999999999999998 4567888888999997 99999999999999987 499999999875 6889
Q ss_pred HHHHHHhCCce-EEE---cCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCc---cccceE
Q 025522 145 RTFSEQTKFKG-VYA---DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGG---WQQGGI 217 (251)
Q Consensus 145 ~~f~~~~~~pf-l~s---Dp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~---~q~gg~ 217 (251)
++|+++++++| ++. |+...+.++||+..... +.. .++. ...+.+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~----~~~-------------------------~~~~~~~~~~~~~ 130 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPG----PKD-------------------------EDEDYIVDHTIIM 130 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEE----EEC-------------------------TTSCEEEEECCEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEec----CCC-------------------------CCCCeeEeccceE
Confidence 99999999999 774 55667888888764321 000 0001 124479
Q ss_pred EEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 218 IVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
||+|++ |+|++.+.+. .+.+++++.+
T Consensus 131 ~lid~~-G~i~~~~~g~-----~~~~~l~~~l 156 (164)
T 2ggt_A 131 YLIGPD-GEFLDYFGQN-----KRKGEIAASI 156 (164)
T ss_dssp EEECTT-SCEEEEEETT-----CCHHHHHHHH
T ss_pred EEECCC-CeEEEEeCCC-----CCHHHHHHHH
Confidence 999998 6999998653 3456665554
No 79
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.78 E-value=5.1e-19 Score=143.49 Aligned_cols=148 Identities=8% Similarity=0.057 Sum_probs=116.8
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChh-hHHHHHHHHHcHHHHHHc---CCEEEEEeCC----C
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG----S 140 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~~---gv~vVaVs~~----~ 140 (251)
...|+.+|+|++.|.+| .++++++ .++++|++|++.||+. |+.+++.|+++++++.+. ++++|+|+.+ +
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~ 86 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDP 86 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCC
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCC
Confidence 45688899999999999 9999998 5567888999999996 999999999999999876 7999999965 5
Q ss_pred HHHHHHHHHHhCCce-EEEcCC---hhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccce
Q 025522 141 VEQARTFSEQTKFKG-VYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGG 216 (251)
Q Consensus 141 ~~~~~~f~~~~~~pf-l~sDp~---~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg 216 (251)
.+.+++|+++++.+| +++|++ .++.++||+...... .. ....+ ++ ...|.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~----~~-----------~~~~~--~i---------~~~P~ 140 (172)
T 2k6v_A 87 PEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQ----YR-----------GPGEY--LV---------DHTAT 140 (172)
T ss_dssp HHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEE----EE-----------ETTEE--EE---------EECCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEecc----CC-----------CCCCc--eE---------ecCCE
Confidence 789999999999999 999998 688899998653210 00 00000 00 13678
Q ss_pred EEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 217 IIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 217 ~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
+||+| + |+|++.+.+.. .++.+++++.++
T Consensus 141 ~~lid-~-G~i~~~~~g~~---~~~~~~l~~~l~ 169 (172)
T 2k6v_A 141 TFVVK-E-GRLVLLYSPDK---AEATDRVVADLQ 169 (172)
T ss_dssp EEEEE-T-TEEEEEECHHH---HTCHHHHHHHHH
T ss_pred EEEEE-C-CEEEEEECCCC---CCCHHHHHHHHH
Confidence 99999 8 69999987643 346777777664
No 80
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=1.1e-18 Score=138.70 Aligned_cols=135 Identities=14% Similarity=0.180 Sum_probs=110.3
Q ss_pred ccccCCCC-CcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH-HHHHH
Q 025522 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (251)
Q Consensus 69 ~~~g~~ap-~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~-~~~~~ 146 (251)
...|+.+| +|++.|.+|+.++++++ .++.+|++|++.||+.|+.+++.|.++++++.+.++.+++|+.+.. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL--KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT--TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc--CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 56899999 99999999999999998 4456677777999999999999999999999888999999998864 68999
Q ss_pred HHHHhCCce--EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCC
Q 025522 147 FSEQTKFKG--VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGK 224 (251)
Q Consensus 147 f~~~~~~pf--l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~gg 224 (251)
|.++.++++ ++.|++..+.+.||+.. .|..||+|++
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~- 118 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLING-----------------------------------------IPRFILLDRD- 118 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCCS-----------------------------------------SCCEEEECTT-
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcCC-----------------------------------------CCEEEEECCC-
Confidence 999999997 88898888888776532 3468999998
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 225 SNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 225 g~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|+|++.+.+ ..+..+++++|+.+
T Consensus 119 G~i~~~~~g--~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 119 GKIISANMT--RPSDPKTAEKFNEL 141 (152)
T ss_dssp SCEEESSCC--CTTCHHHHHHHHHH
T ss_pred CeEEEccCC--CCCHHHHHHHHHHH
Confidence 699987644 33344555555544
No 81
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.78 E-value=1e-18 Score=145.98 Aligned_cols=93 Identities=10% Similarity=0.126 Sum_probs=81.2
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-------- 139 (251)
..+.++.+|+|++.|.+|+.++++++ .++++|++|++.|||+|+.+++.|+++++++.+.|+++|+|+.+
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~--~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGG--TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHc--CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 45778999999999999999999998 45677778889999999999999999999999999999999987
Q ss_pred CHHHHHHHH-HHhCCce-EEE--cCCh
Q 025522 140 SVEQARTFS-EQTKFKG-VYA--DPNH 162 (251)
Q Consensus 140 ~~~~~~~f~-~~~~~pf-l~s--Dp~~ 162 (251)
+.+.+++|+ ++++++| ++. |++.
T Consensus 99 ~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 678999999 8999999 886 5554
No 82
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.78 E-value=1.2e-18 Score=139.31 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=99.1
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCC
Q 025522 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (251)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~ 153 (251)
.+|+|++. .+|+.++++++ .++++|++|++.||++|+.+++.|++++++++..++.+|+|+.++.+.+++|++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 34555544 79999999998 5567788888999999999999999999999889999999999999999999999999
Q ss_pred ce-EEEcCCh---hHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCeEEE
Q 025522 154 KG-VYADPNH---SSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISY 229 (251)
Q Consensus 154 pf-l~sDp~~---~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~ 229 (251)
+| ++.|.+. .+++.||.. . ...|.+||+|++ |+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~------------------------------v---------~~~P~~~lid~~-G~i~~ 120 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNT------------------------------V---------GVLPFTVVEAPK-CGYRQ 120 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCC------------------------------S---------CCSSEEEEEETT-TTEEE
T ss_pred CCceEecCccchHHHHHHhCCc------------------------------c---------CCCCEEEEECCC-CcEEE
Confidence 99 8887642 334444310 0 125689999998 69999
Q ss_pred EEeCCCCCCCCCHHHHHHHh
Q 025522 230 IHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 230 ~h~~~~~~D~~~~~eIL~al 249 (251)
.+.+.. +..++++.|+.+
T Consensus 121 ~~~g~~--~~~~l~~~l~~l 138 (151)
T 3raz_A 121 TITGEV--NEKSLTDAVKLA 138 (151)
T ss_dssp ECCSCC--CHHHHHHHHHHH
T ss_pred EECCCC--CHHHHHHHHHHH
Confidence 887632 223344444444
No 83
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.78 E-value=1.2e-17 Score=135.47 Aligned_cols=137 Identities=14% Similarity=0.129 Sum_probs=107.9
Q ss_pred CCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChh-hHHHHHHHHHcHHHHHH----cCCEEEEEeCC----CHHHHHH
Q 025522 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (251)
Q Consensus 76 p~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~----~gv~vVaVs~~----~~~~~~~ 146 (251)
|+|++.|.+|+.++++++ .++++|++|++.||+. |+.+++.|+++++++++ .++++|+|+.+ +.+.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~--~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF--RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT--TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh--CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 899999999999999998 4578888999999997 99999999999999976 59999999987 5789999
Q ss_pred HHHHhCCce-EEEcCC---hhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCc---cccceEEE
Q 025522 147 FSEQTKFKG-VYADPN---HSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGG---WQQGGIIV 219 (251)
Q Consensus 147 f~~~~~~pf-l~sDp~---~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~---~q~gg~fV 219 (251)
|+++++++| ++.|.. ..++++||+..... +.. .++. ...+.+||
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~----~~~-------------------------~~~~~~~~~~~~~~l 135 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAG----PKD-------------------------EDQDYIVDHSIAIYL 135 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEEC----CCC-------------------------SSCCCCEECCCEEEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEec----CCC-------------------------CCCCeEEeccceEEE
Confidence 999999999 888754 47888898765321 000 0011 13568999
Q ss_pred EcCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 220 AGPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 220 id~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+|++ |+|++.|.+. .+.+++++.+
T Consensus 136 id~~-G~i~~~~~g~-----~~~~~l~~~l 159 (171)
T 2rli_A 136 LNPD-GLFTDYYGRS-----RSAEQISDSV 159 (171)
T ss_dssp ECTT-SCEEEEEESS-----CCHHHHHHHH
T ss_pred ECCC-CeEEEEECCC-----CCHHHHHHHH
Confidence 9998 6999998763 2455555544
No 84
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.77 E-value=7.8e-18 Score=130.70 Aligned_cols=129 Identities=11% Similarity=0.120 Sum_probs=105.5
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHh
Q 025522 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (251)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~ 151 (251)
..+|+|++.|.+|+.++++++ +++ .+|++|++.||++|+.+++.|.++++++. ++.++.|+.++ .+.+++|.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGK-PAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCC-EEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 368999999999999999998 444 45555569999999999999999999886 99999999976 78999999999
Q ss_pred CCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCCeEEEE
Q 025522 152 KFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYI 230 (251)
Q Consensus 152 ~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg~I~~~ 230 (251)
+++| ++.|++..+.+.||+.. .|..|++|++ |+|. .
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~-----------------------------------------~P~~~lid~~-G~i~-~ 114 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPW-----------------------------------------QPAFVFYRAD-GTST-F 114 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCS-----------------------------------------SSEEEEECTT-SCEE-E
T ss_pred CCCceEEECCchhHHHhcCCCC-----------------------------------------CCEEEEECCC-CcEE-E
Confidence 9999 99999998888877532 3468999998 6888 6
Q ss_pred EeCCCCCCCCCHHHHHHHhh
Q 025522 231 HRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 231 h~~~~~~D~~~~~eIL~al~ 250 (251)
+.+ ..+..+.+++.+.+.
T Consensus 115 ~~~--~~g~~~~~~l~~~l~ 132 (136)
T 1lu4_A 115 VNN--PTAAMSQDELSGRVA 132 (136)
T ss_dssp ECC--SSSCCCHHHHHHHHH
T ss_pred EEc--CCCccCHHHHHHHHH
Confidence 662 333456777776653
No 85
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.77 E-value=1.2e-17 Score=128.74 Aligned_cols=126 Identities=14% Similarity=0.154 Sum_probs=104.5
Q ss_pred CCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEE------eCCCHHHHHHH
Q 025522 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (251)
Q Consensus 74 ~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaV------s~~~~~~~~~f 147 (251)
++|+|++.|.+|+.++++++ .++.+|++|++.||+.|+.+++.|.+++++ ...++.+|.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY--KGKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG--TTSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 48999999999999999998 455677777899999999999999999888 4568999999 55677899999
Q ss_pred HHHhCC-ce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCC
Q 025522 148 SEQTKF-KG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 225 (251)
Q Consensus 148 ~~~~~~-pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 225 (251)
.+++++ +| ++.|++..+.+.||+.. .|..||+|++ |
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~lid~~-G 115 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRS-----------------------------------------YPTQAFIDKE-G 115 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEECTT-C
T ss_pred HhhcCCCCeeEEECcchHHHHHcCccc-----------------------------------------CCeEEEECCC-C
Confidence 999999 88 99999998888887532 3468999998 6
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 226 NISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 226 ~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
+|++.+.+. .+.+++.+.+
T Consensus 116 ~i~~~~~g~-----~~~~~l~~~l 134 (138)
T 4evm_A 116 KLVKTHPGF-----MEKDAILQTL 134 (138)
T ss_dssp CEEEEEESC-----CCHHHHHHHH
T ss_pred cEEEeecCC-----CcHHHHHHHH
Confidence 999998863 3355665554
No 86
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.77 E-value=7.9e-19 Score=142.13 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=88.3
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-------- 139 (251)
+.++|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|.++++++. ++.+|+|+.+
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNV--GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGC--CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred cccccCcCCCCEeecCCCCEeeHHHh--CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 36789999999999999999999998 45677777779999999999999999999887 9999999986
Q ss_pred -----------CHHHHHHHHHHhCC-ce-EEEcCChhHHHHcCCc
Q 025522 140 -----------SVEQARTFSEQTKF-KG-VYADPNHSSYEALSFV 171 (251)
Q Consensus 140 -----------~~~~~~~f~~~~~~-pf-l~sDp~~~ly~alGl~ 171 (251)
+.+.+++|.+++++ +| ++.| +..+.+.||+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~ 129 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVR 129 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCC
T ss_pred ccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCC
Confidence 77899999999999 89 9999 88888877643
No 87
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.77 E-value=4.1e-18 Score=147.03 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=79.5
Q ss_pred cccCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------C
Q 025522 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~--------~ 140 (251)
.....+|+|++.|.+ |+.++|+++ ++++||++||++||++|+ |+++|+++++++++.|+.||+|+++ +
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~ 106 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGD 106 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCC
Confidence 335679999999999 999999998 567889999999999999 9999999999999999999999853 5
Q ss_pred HHHHHHHHH------HhCCce-EEEcCC
Q 025522 141 VEQARTFSE------QTKFKG-VYADPN 161 (251)
Q Consensus 141 ~~~~~~f~~------~~~~pf-l~sDp~ 161 (251)
.+.+++|++ +++++| +++|.+
T Consensus 107 ~~~i~~f~~~~~~~~~~~~~fpll~d~d 134 (215)
T 2i3y_A 107 NKEILPGLKYVRPGGGFVPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhccchhccCccceeEeeec
Confidence 678999999 899999 998754
No 88
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.77 E-value=3.3e-18 Score=146.20 Aligned_cols=90 Identities=6% Similarity=-0.010 Sum_probs=80.2
Q ss_pred cccCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------C
Q 025522 70 DTKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~--------~ 140 (251)
..++.+|+|++.|.+ |+.++++++ .+++||++||++|||+|+.+++.|+++++++++.|+.||+|+.+ +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 446789999999999 999999998 55788999999999999999999999999999999999999975 4
Q ss_pred HHHHHHHHH------HhCCce-EEEcCC
Q 025522 141 VEQARTFSE------QTKFKG-VYADPN 161 (251)
Q Consensus 141 ~~~~~~f~~------~~~~pf-l~sDp~ 161 (251)
.+.+++|++ +++++| +++|.+
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHHhcccccccccceEEEEEee
Confidence 688999998 889999 987644
No 89
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.77 E-value=4.2e-18 Score=133.84 Aligned_cols=120 Identities=10% Similarity=0.153 Sum_probs=102.8
Q ss_pred cccCCCCCcEE--ecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC------CH
Q 025522 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (251)
Q Consensus 70 ~~g~~ap~f~l--~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~------~~ 141 (251)
.+|+.+|+|++ .|.+|+.++++++ + ++++|++|++.||++|+.+++.|.++++++.+. +.+++|+.+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~-~-gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI-G-EKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT-T-TSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc-C-CCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57899999999 7899999999987 3 455666667999999999999999999998776 999999976 57
Q ss_pred HHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 142 EQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 142 ~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
+.+++|+++++++| ++.|.+..+.+.||+.. .|..||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 117 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEY-----------------------------------------VPAYYVF 117 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCC-----------------------------------------SSEEEEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCC-----------------------------------------CCEEEEE
Confidence 89999999999999 99999988888877532 3468999
Q ss_pred cCCCCeEEEEEeCC
Q 025522 221 GPGKSNISYIHRDK 234 (251)
Q Consensus 221 d~ggg~I~~~h~~~ 234 (251)
|++ |++++.+.+.
T Consensus 118 d~~-G~i~~~~~g~ 130 (148)
T 2b5x_A 118 DKT-GQLRHFQAGG 130 (148)
T ss_dssp CTT-CBEEEEEESC
T ss_pred CCC-CcEEEEecCC
Confidence 998 6999988773
No 90
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.6e-20 Score=150.03 Aligned_cols=137 Identities=14% Similarity=0.184 Sum_probs=112.4
Q ss_pred CccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHH-cHHHHH-HcCCEEEEEeCCCH-HHH
Q 025522 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQA 144 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~-~~~~~~-~~gv~vVaVs~~~~-~~~ 144 (251)
..++|+.+|+|++.|.+|+.++++++ .++++|++|++.||++|+.+++.|.+ ++.+++ ..++.+|+|+.++. +.+
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSL--RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 45789999999999999999999998 45567777789999999999999998 888887 78999999999865 578
Q ss_pred HHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCC
Q 025522 145 RTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPG 223 (251)
Q Consensus 145 ~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~g 223 (251)
++|.++++++| ++.|++..++++||+... ..|..||+|++
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------------------------~~P~~~lid~~ 124 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRDA---------------------------------------GITRNVLIDRE 124 (159)
Confidence 89999999999 999999888887775310 13468999998
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 224 KSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 224 gg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|+|++.+.+.+ ..+++++++.+
T Consensus 125 -G~i~~~~~g~~---~~~l~~~l~~l 146 (159)
T 2ls5_A 125 -GKIVKLTRLYN---EEEFASLVQQI 146 (159)
Confidence 69999887633 33566666554
No 91
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.76 E-value=5.8e-18 Score=144.99 Aligned_cols=87 Identities=10% Similarity=0.015 Sum_probs=77.8
Q ss_pred cCCCCCcEEecCC-CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------CCHH
Q 025522 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (251)
Q Consensus 72 g~~ap~f~l~d~~-G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~--------~~~~ 142 (251)
.+.+|+|++.|.+ |+.++|+++ .+++||++||++|||+| .|+++|+++++++++.|+.||+|+. ++.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 4569999999999 999999998 56789999999999999 7999999999999999999999984 3567
Q ss_pred HHHHHHH------HhCCce-EEEcCC
Q 025522 143 QARTFSE------QTKFKG-VYADPN 161 (251)
Q Consensus 143 ~~~~f~~------~~~~pf-l~sDp~ 161 (251)
.+++|++ +++++| +++|.+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d 116 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhcchhhccCccceeeeEec
Confidence 8999999 899999 998754
No 92
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.75 E-value=6.4e-19 Score=147.06 Aligned_cols=89 Identities=9% Similarity=0.120 Sum_probs=79.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--------C
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~--------~ 140 (251)
.+.+..+|+|++.|.+|+.++++++ ++++||++||+.|||+|+.+++.|+++++++++.|+.||+|+.+ +
T Consensus 20 ~~~~~~~p~f~l~d~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~ 97 (187)
T 3dwv_A 20 MSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGN 97 (187)
T ss_dssp CTTCCSGGGSCCBBTTSCBCCGGGG--TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSB
T ss_pred hcCCCccCCeEEEcCCCCEeeHHHh--CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCC
Confidence 4556889999999999999999998 45778888899999999999999999999999999999999975 4
Q ss_pred HHHHHHHHHH-hCCce-EEEc
Q 025522 141 VEQARTFSEQ-TKFKG-VYAD 159 (251)
Q Consensus 141 ~~~~~~f~~~-~~~pf-l~sD 159 (251)
.+.+++|+++ ++++| +++|
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~ 118 (187)
T 3dwv_A 98 EEEIKEFVCTKFKAEFPIMAK 118 (187)
T ss_dssp TTHHHHSCCBCCCCSSCBBCC
T ss_pred HHHHHHHHHhccCCCCceeec
Confidence 6789999984 59999 8864
No 93
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.75 E-value=5.7e-17 Score=131.48 Aligned_cols=121 Identities=15% Similarity=0.106 Sum_probs=99.9
Q ss_pred CCCccccCCCCCcEEecC--CCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC-CCHH
Q 025522 66 SVSEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-GSVE 142 (251)
Q Consensus 66 ~~~~~~g~~ap~f~l~d~--~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~-~~~~ 142 (251)
.....+|+.+|+|++.|. +|+.+.+.++.++ +++|++|++.|||+|+.+++.|++++++ |+.++.|+. ++.+
T Consensus 19 ~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~ 93 (168)
T 2b1k_A 19 LESALIGKPVPKFRLESLDNPGQFYQADVLTQG-KPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQ 93 (168)
T ss_dssp CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCS-SCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHH
T ss_pred ccccccCCcCCCeEeecccCCCcEeehhHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChH
Confidence 345678999999999999 9999999887544 4556666699999999999999887664 899999996 4568
Q ss_pred HHHHHHHHhCCce--EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 143 QARTFSEQTKFKG--VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 143 ~~~~f~~~~~~pf--l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
.+++|.++++++| ++.|++..+.+.||+.. .|.+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 132 (168)
T 2b1k_A 94 KAISWLKELGNPYALSLFDGDGMLGLDLGVYG-----------------------------------------APETFLI 132 (168)
T ss_dssp HHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS-----------------------------------------SSEEEEE
T ss_pred HHHHHHHHcCCCCceeeECcchHHHHHcCccc-----------------------------------------cCEEEEE
Confidence 8999999999999 68898888777776432 3468999
Q ss_pred cCCCCeEEEEEeC
Q 025522 221 GPGKSNISYIHRD 233 (251)
Q Consensus 221 d~ggg~I~~~h~~ 233 (251)
|++ |+|++.+.+
T Consensus 133 d~~-G~i~~~~~g 144 (168)
T 2b1k_A 133 DGN-GIIRYRHAG 144 (168)
T ss_dssp CTT-SBEEEEEES
T ss_pred CCC-CeEEEEEeC
Confidence 998 699999886
No 94
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.75 E-value=5.3e-17 Score=125.49 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=83.1
Q ss_pred cCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHH
Q 025522 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (251)
Q Consensus 72 g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~ 150 (251)
|..+|+|++.|.+|+.++++++ ++++ +|++|++.||++|+.+++.|.++++++. ++.++.|+.++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k~-~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGKP-AVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTSC-EEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCCe-EEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 5679999999999999999998 4444 5555569999999999999999998886 89999999865 6899999999
Q ss_pred hCC-ce-EEEcCChhHHHHcCC
Q 025522 151 TKF-KG-VYADPNHSSYEALSF 170 (251)
Q Consensus 151 ~~~-pf-l~sDp~~~ly~alGl 170 (251)
+++ +| ++.|.+..+.+.||+
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTC
T ss_pred cCCCceEEEEcCCcHHHHHcCC
Confidence 999 89 999999888887765
No 95
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.75 E-value=1.3e-17 Score=140.89 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=101.6
Q ss_pred ccccCCC--CCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChh-hHHHHHHHHHcHHHHHHc---CCEEEEEeCC---
Q 025522 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (251)
Q Consensus 69 ~~~g~~a--p~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~-C~~el~~L~~~~~~~~~~---gv~vVaVs~~--- 139 (251)
...|+.+ |+|++.|.+|+.++++++ .++++|++|+++|||. |+.+++.|+++++++.+. +++||+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL--LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG--TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4567765 999999999999999998 4567888889999996 999999999999999864 8999999988
Q ss_pred -CHHHHHHHHHHhCCce-EEEc---CChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 140 -SVEQARTFSEQTKFKG-VYAD---PNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 140 -~~~~~~~f~~~~~~pf-l~sD---p~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
+++.+++|+++++.+| .+.+ ....+.++||+.... |... ..|. .+. ....
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~-----p~~~-------~~~~------~~~-------~~~~ 145 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFST-----PPNV-------KPGQ------DYL-------VDHS 145 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------------------------C-------TTTC
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEee-----cccc-------CCCC------Cce-------eeec
Confidence 6789999999999888 7764 456788899987421 1000 0000 000 0124
Q ss_pred ceEEEEcCCCCeEEEEEeC
Q 025522 215 GGIIVAGPGKSNISYIHRD 233 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~ 233 (251)
+.+||||++ |+|++.+.+
T Consensus 146 ~~~~liD~~-G~i~~~~~g 163 (200)
T 2b7k_A 146 IFFYLMDPE-GQFVDALGR 163 (200)
T ss_dssp CCEEEECTT-SCEEEEECT
T ss_pred ceEEEECCC-CcEEEEeCC
Confidence 579999998 699998865
No 96
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.74 E-value=2.4e-17 Score=152.10 Aligned_cols=123 Identities=11% Similarity=0.105 Sum_probs=108.3
Q ss_pred CCccccCCCCCcE-----EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC--
Q 025522 67 VSEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-- 139 (251)
Q Consensus 67 ~~~~~g~~ap~f~-----l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-- 139 (251)
....+|+.+|+|+ +.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+.|+.||+|+.+
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl--~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~ 126 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSL--RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEY 126 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHh--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcc
Confidence 3468899999999 99999999999998 45677888889999999999999999999999999999999874
Q ss_pred ----CHHHHHHHHHHhCCce-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 140 ----SVEQARTFSEQTKFKG-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 140 ----~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
+.+.+++|+++++++| ++.|.+..+.+.||+.. .
T Consensus 127 ~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~-----------------------------------------~ 165 (352)
T 2hyx_A 127 AFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRY-----------------------------------------W 165 (352)
T ss_dssp GGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCE-----------------------------------------E
T ss_pred cccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCc-----------------------------------------c
Confidence 5789999999999999 99999988888776531 3
Q ss_pred ceEEEEcCCCCeEEEEEeC
Q 025522 215 GGIIVAGPGKSNISYIHRD 233 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~ 233 (251)
|..||+|++ |+|++.+.+
T Consensus 166 Pt~~lID~~-G~Iv~~~~G 183 (352)
T 2hyx_A 166 PAEYLIDAT-GTVRHIKFG 183 (352)
T ss_dssp SEEEEECTT-SBEEEEEES
T ss_pred CEEEEEeCC-CeEEEEEcC
Confidence 468999998 699999886
No 97
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.9e-18 Score=140.36 Aligned_cols=88 Identities=16% Similarity=0.162 Sum_probs=66.3
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC--------CCHH
Q 025522 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (251)
Q Consensus 71 ~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~--------~~~~ 142 (251)
-+..+|+|++.|.+|+.++++++ .++++|++|++.||++|+ +++.|+++++++++.|+.||+|+. ++.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~--~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQL--KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGG--TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHHHc--CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 35678999999999999999998 456677777899999999 999999999999999999999987 4567
Q ss_pred HHHHHH-HHhCCce-EEEcCC
Q 025522 143 QARTFS-EQTKFKG-VYADPN 161 (251)
Q Consensus 143 ~~~~f~-~~~~~pf-l~sDp~ 161 (251)
.+++|+ ++++++| +++|++
T Consensus 85 ~~~~~~~~~~~~~~p~~~d~d 105 (171)
T 3cmi_A 85 EIAQFCQLNYGVTFPIMKKID 105 (171)
T ss_dssp ----------CCCSCBBCCCB
T ss_pred HHHHHHHhccCCCceEEeecc
Confidence 899999 9999999 988755
No 98
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.72 E-value=1e-16 Score=127.64 Aligned_cols=122 Identities=18% Similarity=0.106 Sum_probs=96.5
Q ss_pred CCCccccCCCCCcEEecCCC--------CeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 66 SVSEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 66 ~~~~~~g~~ap~f~l~d~~G--------~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
.+....|+.+|+|++.|.+| +.++++++ + ++.+|++|++.||++|+.+++.|++++++ .++.++.|+
T Consensus 5 ~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~-gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 5 IPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF-K-GKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp -------CBCCCCCBCCCTTCEETTEECCCBCGGGG-T-TSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred hhhHHhCCCCCCceeeeccCcccccccCceechHHh-C-CCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 34568899999999999999 99999998 3 45566677799999999999999987765 459999999
Q ss_pred CC-CHHHHHHHHHHhCCce--EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcccc
Q 025522 138 PG-SVEQARTFSEQTKFKG--VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQ 214 (251)
Q Consensus 138 ~~-~~~~~~~f~~~~~~pf--l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~ 214 (251)
.+ +.+.+++|+++++++| ++.|++..+++.||+.. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~ 118 (156)
T 1kng_A 80 YKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG-----------------------------------------V 118 (156)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS-----------------------------------------S
T ss_pred CCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc-----------------------------------------c
Confidence 74 5688999999999999 88898888887776432 3
Q ss_pred ceEEEEcCCCCeEEEEEeCC
Q 025522 215 GGIIVAGPGKSNISYIHRDK 234 (251)
Q Consensus 215 gg~fVid~ggg~I~~~h~~~ 234 (251)
|.+||+|++ |++++.+.+.
T Consensus 119 P~~~~id~~-G~i~~~~~g~ 137 (156)
T 1kng_A 119 PETFVVGRE-GTIVYKLVGP 137 (156)
T ss_dssp CEEEEECTT-SBEEEEEESC
T ss_pred CeEEEEcCC-CCEEEEEeCC
Confidence 468999998 6999988763
No 99
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.71 E-value=3.6e-17 Score=131.51 Aligned_cols=130 Identities=9% Similarity=0.070 Sum_probs=103.9
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC------CHH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVE 142 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~------~~~ 142 (251)
...++.+| ++.|.+|+.++++++ .++.+|++|++.||++|+.+++.|++++++++..|+.+|+|+.+ +.+
T Consensus 14 ~~~~~~~p--~l~~~~g~~~~~~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 14 ATVPHTMS--TMKTADNRPASVYLK--KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp CCHHHHHT--TCEETTSSBGGGGCC--TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cccCCcCC--ccCCCCCCEeeHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 34566666 788999999999987 44566777779999999999999999999999999999999964 456
Q ss_pred HHHHHHHHhCCc-e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEE
Q 025522 143 QARTFSEQTKFK-G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVA 220 (251)
Q Consensus 143 ~~~~f~~~~~~p-f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVi 220 (251)
.+++|.++.+++ + +..|.+..+.+.||+.. .|..||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------------------------------------~P~~~li 128 (164)
T 2h30_A 90 EFQKWYAGLNYPKLPVVTDNGGTIAQNLNISV-----------------------------------------YPSWALI 128 (164)
T ss_dssp HHHHHHTTSCCTTSCEEECTTCHHHHHTTCCS-----------------------------------------SSEEEEE
T ss_pred HHHHHHHhCCCCcceEEEcCchHHHHHcCCCc-----------------------------------------cceEEEE
Confidence 888999888999 6 99999988888877532 3468999
Q ss_pred cCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 221 GPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 221 d~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
|++ |++++.+.+. .+.+++.+.+
T Consensus 129 d~~-G~i~~~~~g~-----~~~~~l~~~i 151 (164)
T 2h30_A 129 GKD-GDVQRIVKGS-----INEAQALALI 151 (164)
T ss_dssp CTT-SCEEEEEESC-----CCHHHHHHHH
T ss_pred CCC-CcEEEEEcCC-----CCHHHHHHHH
Confidence 998 6999988762 2345555444
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.69 E-value=5.1e-17 Score=128.57 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=95.2
Q ss_pred ccCCCCC-cEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH-cCCEEEEEeCC-CHHHHHHH
Q 025522 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPG-SVEQARTF 147 (251)
Q Consensus 71 ~g~~ap~-f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~gv~vVaVs~~-~~~~~~~f 147 (251)
.++.+|+ |++.|.+|+.++++++ .++++|++|++.||++|+.+++.|+++++++.+ .++.+|+|+.+ +.+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL--AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5788999 9999999999999998 456778888899999999999999999999985 79999999998 56889999
Q ss_pred HHHhCCc-e-EEE-cCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc-CC
Q 025522 148 SEQTKFK-G-VYA-DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG-PG 223 (251)
Q Consensus 148 ~~~~~~p-f-l~s-Dp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid-~g 223 (251)
++++++. + ++. |.+..+.+.||+. ..|..||+| ++
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~~ 119 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDVK-----------------------------------------SIPTLVGVEADS 119 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCC-----------------------------------------SSSEEEEEETTT
T ss_pred HHhCCccccccCchHHHHHHHHHcCCC-----------------------------------------CCCEEEEEECCC
Confidence 9987753 3 332 4455555555432 145789999 77
Q ss_pred CCeEEEEEeC
Q 025522 224 KSNISYIHRD 233 (251)
Q Consensus 224 gg~I~~~h~~ 233 (251)
|+|++.+..
T Consensus 120 -G~i~~~~~~ 128 (144)
T 1i5g_A 120 -GNIITTQAR 128 (144)
T ss_dssp -CCEEESCHH
T ss_pred -CcEEeccch
Confidence 699987754
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.68 E-value=3e-16 Score=129.62 Aligned_cols=146 Identities=12% Similarity=0.138 Sum_probs=101.8
Q ss_pred ccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCCh-hhHHHHHHHHHcHHHHHHcC--CEEEEEeC----CCHHH
Q 025522 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGP----GSVEQ 143 (251)
Q Consensus 71 ~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp-~C~~el~~L~~~~~~~~~~g--v~vVaVs~----~~~~~ 143 (251)
+|.++|+|+|.|.+|+.++++++ +++++|++|+++||| .|..++++|.++++++++.| +++|+|+. |+++.
T Consensus 8 ~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~ 85 (170)
T 4hde_A 8 LNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPEN 85 (170)
T ss_dssp CCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHH
T ss_pred CCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHH
Confidence 68899999999999999999998 567888899999998 79999999999998887665 78888886 46789
Q ss_pred HHHHHHHhCCce----EEEcCChh-HHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCcc-ccceE
Q 025522 144 ARTFSEQTKFKG----VYADPNHS-SYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGW-QQGGI 217 (251)
Q Consensus 144 ~~~f~~~~~~pf----l~sDp~~~-ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~-q~gg~ 217 (251)
+++|+++++..+ .+++++.+ +.+.++ ..+... ...+ ..+.. -.+.+
T Consensus 86 l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~----------------------~~~~~~-----~~~~-~~~~~~H~~~~ 137 (170)
T 4hde_A 86 LKAFIQKFTEDTSNWNLLTGYSLEDITKFSK----------------------DNFQSL-----VDKP-ENGQVIHGTSF 137 (170)
T ss_dssp HHHHHTTTCSCCTTEEEEBCSCHHHHHHHHH----------------------HHHCCC-----CBCC-TTSCCBCCCEE
T ss_pred HHHHHHHcCCCCCCceecCcccHHHHHHHHH----------------------hccccc-----ccCC-CCceEEeeeEE
Confidence 999999987654 45554432 111110 011100 0000 01111 23578
Q ss_pred EEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 218 IVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 218 fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
||||++ |+|+..|.+.. ..+.++|++.++
T Consensus 138 ~liD~~-G~i~~~~~g~~---~~~~~~l~~~ik 166 (170)
T 4hde_A 138 YLIDQN-GKVMKKYSGIS---NTPYEDIIRDMK 166 (170)
T ss_dssp EEECTT-SCEEEEEESSS---SCCHHHHHHHHH
T ss_pred EEEcCC-CeEEEEECCCC---CCCHHHHHHHHH
Confidence 999998 69998887633 344677766553
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.67 E-value=5.7e-17 Score=128.81 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=97.0
Q ss_pred cccCCCCC-cEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHH-HcCCEEEEEeCCC-HHHHHH
Q 025522 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (251)
Q Consensus 70 ~~g~~ap~-f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~-~~gv~vVaVs~~~-~~~~~~ 146 (251)
..++.+|+ |++.|.+| .++++++ .++.+|++|++.||++|+.+++.|+++++++. +.++.+++|+.+. .+..++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSL--AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHh--CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 46889999 99999999 9999998 45677788889999999999999999999998 3799999999984 578999
Q ss_pred HHHHhCCc-e-EEE-cCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEc-C
Q 025522 147 FSEQTKFK-G-VYA-DPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAG-P 222 (251)
Q Consensus 147 f~~~~~~p-f-l~s-Dp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid-~ 222 (251)
|++++++. + ++. |.+..+.+.||+. ..|..||+| +
T Consensus 80 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------------------------------------~~Pt~~lid~~ 118 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQSEAVQKLSKHFNVE-----------------------------------------SIPTLIGVDAD 118 (146)
T ss_dssp HHTTCSSEECCGGGHHHHHHHHHHTTCC-----------------------------------------SSSEEEEEETT
T ss_pred HHHHCCceeeccchhhHHHHHHHHhCCC-----------------------------------------CCCEEEEEECC
Confidence 99887643 3 332 4455555555432 145789999 7
Q ss_pred CCCeEEEEEeCCCCCCC
Q 025522 223 GKSNISYIHRDKEAGDD 239 (251)
Q Consensus 223 ggg~I~~~h~~~~~~D~ 239 (251)
+ |+|++.+......++
T Consensus 119 ~-G~i~~~~~~~~~~~~ 134 (146)
T 1o8x_A 119 S-GDVVTTRARATLVKD 134 (146)
T ss_dssp T-CCEEESCHHHHHTTC
T ss_pred C-CeEEEecchhHHhhC
Confidence 7 699988765444433
No 103
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.46 E-value=1e-17 Score=131.60 Aligned_cols=123 Identities=9% Similarity=0.163 Sum_probs=95.0
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHH--HcCCEEEEEeCCC-HHHHHHHHH
Q 025522 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD--ASGVALVLIGPGS-VEQARTFSE 149 (251)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~--~~gv~vVaVs~~~-~~~~~~f~~ 149 (251)
+.+|+|++.|.+|+.+++++++++++.+|++|++.|||+|+.+++.|++++++++ ..++.+++|+.++ .+.+++|++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 4689999999999999999943544378888889999999999999999999985 3589999999984 478899999
Q ss_pred HhCCce----EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccccccCcCCCCccccceEEEEcCCCC
Q 025522 150 QTKFKG----VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKS 225 (251)
Q Consensus 150 ~~~~pf----l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~~~g~~~~g~~~q~gg~fVid~ggg 225 (251)
++++++ +..|.+..+.+.||+. ..|..||+|++ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~-----------------------------------------~~P~~~lid~~-G 119 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGIT-----------------------------------------GIPALVIVKKD-G 119 (143)
Confidence 988876 3344445555555432 13468899987 6
Q ss_pred eEEEEEeCCCCC
Q 025522 226 NISYIHRDKEAG 237 (251)
Q Consensus 226 ~I~~~h~~~~~~ 237 (251)
+|++.+-..+..
T Consensus 120 ~i~~~~~~~~~~ 131 (143)
T 2lus_A 120 TLISMNGRGEVQ 131 (143)
Confidence 898886554444
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.63 E-value=4.7e-16 Score=122.58 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=77.0
Q ss_pred cccCCCCCc-EEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHH-HcCCEEEEEeCCC-HHHHHH
Q 025522 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (251)
Q Consensus 70 ~~g~~ap~f-~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~-~~gv~vVaVs~~~-~~~~~~ 146 (251)
..|+.+|+| ++.|.+| .++++++ .++.+|++|++.||++|+.+++.|+++++++. +.++.+++|+.+. .+..++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 568899997 9999999 9999998 45567778889999999999999999999997 5799999999985 468889
Q ss_pred HHHHhCCce--EEE-cCChhHHHHcC
Q 025522 147 FSEQTKFKG--VYA-DPNHSSYEALS 169 (251)
Q Consensus 147 f~~~~~~pf--l~s-Dp~~~ly~alG 169 (251)
|.+++++.. +.. |.+..+.+.||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 80 YYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred HHHhCCceEeeccchhHHHHHHHHcC
Confidence 988876432 221 33444444444
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.59 E-value=4.3e-16 Score=127.50 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=73.3
Q ss_pred ccccCCCCCc-EEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH-cCCEEEEEeCCCH-HHHH
Q 025522 69 EDTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQAR 145 (251)
Q Consensus 69 ~~~g~~ap~f-~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~gv~vVaVs~~~~-~~~~ 145 (251)
..+|+.+|+| ++.|.+| .++++++ .++++|++|++.||++|+.+++.|.++++++.+ .++.||+|+.+.. +..+
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFN 98 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHH
T ss_pred hhhcccCCcceeeecCCC-cccHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHH
Confidence 3789999999 9999999 9999998 456788888899999999999999999999986 7999999998865 7888
Q ss_pred HHHHHhCCc
Q 025522 146 TFSEQTKFK 154 (251)
Q Consensus 146 ~f~~~~~~p 154 (251)
+|.++.++.
T Consensus 99 ~~~~~~~~~ 107 (165)
T 3s9f_A 99 AYYAKMPWL 107 (165)
T ss_dssp HHHTTCSSE
T ss_pred HHHHhCCCc
Confidence 999887653
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.32 E-value=3.9e-11 Score=102.30 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=113.8
Q ss_pred CCCccccCCCCC--cEEe-------cCC----C--CeEeCCCcc-CCCcEEEEEEccCCChhhHH-HHHHHHHcHHHH-H
Q 025522 66 SVSEDTKNLLDT--VKVY-------DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-D 127 (251)
Q Consensus 66 ~~~~~~g~~ap~--f~l~-------d~~----G--~~v~ls~l~-~~~~vVLvF~R~~~Cp~C~~-el~~L~~~~~~~-~ 127 (251)
..+..+++++|. +++. +.+ | +++++++.+ +++++||+++++++.|.|.. +++.+.+.++++ +
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k 102 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVK 102 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHH
Confidence 345678999995 3321 111 3 467777776 47789999999999999976 799999998875 7
Q ss_pred HcCC-EEEEEeCCCHHHHHHHHHHhCCc----e-EEEcCChhHHHHcCCccccccccCchhhHHHHHHHhhhhhhhcccc
Q 025522 128 ASGV-ALVLIGPGSVEQARTFSEQTKFK----G-VYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLS 201 (251)
Q Consensus 128 ~~gv-~vVaVs~~~~~~~~~f~~~~~~p----f-l~sDp~~~ly~alGl~~~~~~~~~P~~~~~~~~~~~~g~r~~~k~~ 201 (251)
++|+ +|+.|+.+++...++|.+.++.. + +++|++.++.++||+..... ..+.|
T Consensus 103 ~kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~---------------~gg~R------ 161 (199)
T 4h86_A 103 EKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG---------------DGVYW------ 161 (199)
T ss_dssp HSCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE---------------TTEEE------
T ss_pred hcCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC---------------CCcce------
Confidence 8898 69999999999999999987663 6 99999999999999865321 00111
Q ss_pred cccCcCCCCccccceEEEEcCCCCeEEEEEeCCCCCCC---CCHHHHHHHh
Q 025522 202 FERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDD---PDIQDILKAC 249 (251)
Q Consensus 202 ~~g~~~~g~~~q~gg~fVid~ggg~I~~~h~~~~~~D~---~~~~eIL~al 249 (251)
..+-++|+| + |+|.|.++..++++. ...+.||+.|
T Consensus 162 -----------S~Rya~IVd-D-GvV~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 162 -----------SGRWAMVVE-N-GIVTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp -----------ECSEEEEEE-T-TEEEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred -----------eeEEEEEEE-C-CEEEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 234688998 6 699999999887654 5678888754
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.81 E-value=1.1e-09 Score=88.15 Aligned_cols=67 Identities=16% Similarity=0.123 Sum_probs=43.0
Q ss_pred ccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEc-cCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCCCH
Q 025522 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 69 ~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R-~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
...+...+++ +..|+.+.+++. .++.+|++|+ +.||++|+.+.+.| .+....+ ..++.++.|..+..
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~a~~--~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~ 94 (154)
T 2ju5_A 24 RPIAAANLQW---ESYAEALEHSKQ--DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQK 94 (154)
T ss_dssp CSSCCCCCCE---ECHHHHHHHHHH--HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSS
T ss_pred hhcccCCCCC---CCHHHHHHHHHh--CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCccc
Confidence 3445555556 345677777665 3445566666 89999999999999 4443332 34577777766543
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.70 E-value=1e-08 Score=78.86 Aligned_cols=89 Identities=8% Similarity=0.049 Sum_probs=60.8
Q ss_pred CCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe--CCCHHHHHHHHHH
Q 025522 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTFSEQ 150 (251)
Q Consensus 73 ~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs--~~~~~~~~~f~~~ 150 (251)
+.+++++..+.+|..... .. ..++.+|++|++.||++|+...+.|.++.+++. .++.++.|. .+....+.+-..-
T Consensus 4 ~~~~~l~~~~~~~~~~~~-~~-~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~~~~~~~~~v 80 (126)
T 2l57_A 4 EGIKQINFQSINVVENLE-EA-KEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKNIDLAYKYDA 80 (126)
T ss_dssp CCSSCTTTTCCSEESSTT-TC-CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHHHHHHHHTTC
T ss_pred cccCCCCccccchhHHHH-HH-hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCchHHHHHHcCC
Confidence 345666666666554332 22 345667777889999999999999999888876 689999999 6644333322233
Q ss_pred hCCce-EEEcCChhH
Q 025522 151 TKFKG-VYADPNHSS 164 (251)
Q Consensus 151 ~~~pf-l~sDp~~~l 164 (251)
.++|. ++.|++.++
T Consensus 81 ~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 81 NIVPTTVFLDKEGNK 95 (126)
T ss_dssp CSSSEEEEECTTCCE
T ss_pred cceeEEEEECCCCCE
Confidence 35777 888876543
No 109
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.63 E-value=1.2e-07 Score=73.40 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=35.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHH--HcHHHHHHcCCEEEEEeCCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~--~~~~~~~~~gv~vVaVs~~~ 140 (251)
.++.+|++|++.||++|+...+.|. +...++.. ++.++.|..++
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~ 73 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN 73 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc
Confidence 3567788889999999999999999 77777643 58888887753
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.62 E-value=7.5e-09 Score=81.06 Aligned_cols=92 Identities=11% Similarity=0.127 Sum_probs=63.0
Q ss_pred ccccCCCCCcE-EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCCCH-HH
Q 025522 69 EDTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQ 143 (251)
Q Consensus 69 ~~~g~~ap~f~-l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~~~-~~ 143 (251)
...+..+|+|+ +.+.++....++++ .++.+|++|++.||++|+...+.+ .++.+++. ++.++.|..+.. +.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQ 79 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHH
T ss_pred ccccccCCCcEEecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcch
Confidence 35577888888 66666666666665 245667777799999999998887 67666664 699999998653 45
Q ss_pred HHHHHHHhC---Cce-EEEcCChhH
Q 025522 144 ARTFSEQTK---FKG-VYADPNHSS 164 (251)
Q Consensus 144 ~~~f~~~~~---~pf-l~sDp~~~l 164 (251)
..+++++++ +|. ++.|++.++
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCE
Confidence 556666654 566 888988765
No 111
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.62 E-value=2.8e-08 Score=77.68 Aligned_cols=83 Identities=8% Similarity=-0.006 Sum_probs=62.6
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+.+.+|..+.++++ .++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 36 l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 112 (141)
T 3hxs_A 36 IADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWFV 112 (141)
T ss_dssp TCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred hhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEEE
Confidence 56678888888876 456677777899999999999999999888764 59999999887644333223346777 888
Q ss_pred cCChhHH
Q 025522 159 DPNHSSY 165 (251)
Q Consensus 159 Dp~~~ly 165 (251)
|++..+.
T Consensus 113 ~~~g~~~ 119 (141)
T 3hxs_A 113 PMKGEPQ 119 (141)
T ss_dssp CSSSCCE
T ss_pred eCCCCEE
Confidence 8876643
No 112
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.53 E-value=6.2e-08 Score=74.94 Aligned_cols=89 Identities=8% Similarity=0.074 Sum_probs=56.9
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSE 149 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~ 149 (251)
+....+|+++ +.+++.+..... .++.+|+.|++.||++|+...+.|.++.+++. .++.++.|..+....+.+-..
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~vd~d~~~~l~~~~~ 93 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVNM--KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-KRIYLLKVDLDKNESLARKFS 93 (128)
T ss_dssp -------CCC--CCCCSSSSBTTS--CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGEEEEEEEGGGCHHHHHHTT
T ss_pred HHhccCCccc--cCCccHHHHHHc--cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHcC
Confidence 3455677666 455555544443 56788888889999999999999999988886 468999998876544333223
Q ss_pred HhCCce-EEEcCChh
Q 025522 150 QTKFKG-VYADPNHS 163 (251)
Q Consensus 150 ~~~~pf-l~sDp~~~ 163 (251)
-.++|. ++.+..+.
T Consensus 94 v~~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 94 VKSLPTIILLKNKTM 108 (128)
T ss_dssp CCSSSEEEEEETTEE
T ss_pred CCCcCEEEEEECCEE
Confidence 345676 55554433
No 113
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.43 E-value=1.5e-06 Score=64.96 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=33.1
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
++.+|+.|++.||++|+...+.|.++..++. ++.++.|..+
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 64 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN 64 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC
Confidence 5567777788999999999999998887764 5777777765
No 114
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.39 E-value=2.8e-08 Score=76.21 Aligned_cols=79 Identities=10% Similarity=0.135 Sum_probs=55.9
Q ss_pred EecCCCCeEeCCC-ccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EE
Q 025522 80 VYDVNGNAIPISD-LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VY 157 (251)
Q Consensus 80 l~d~~G~~v~ls~-l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~ 157 (251)
+.+.+|....+.+ +.+.++.+|++|++.||+.|+...+.|.++..++ .++.++.|..+....+.+-..-.++|. ++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 3445666666663 3334667788888999999999999999988877 689999999986543332223335777 66
Q ss_pred EcC
Q 025522 158 ADP 160 (251)
Q Consensus 158 sDp 160 (251)
.|.
T Consensus 83 ~~~ 85 (118)
T 2f51_A 83 VKK 85 (118)
T ss_dssp EEE
T ss_pred EeC
Confidence 665
No 115
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.37 E-value=1.4e-07 Score=74.60 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=63.3
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHH
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSE 149 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~ 149 (251)
..+..+++..+.+.+++.+. +....++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~--~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~ 106 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLD--KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFR 106 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHH--HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTT
T ss_pred hcCCccccCCceecCHHHHH--HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCC
Confidence 34566777778877776554 3335667788888899999999999999999888753 49999999887654433223
Q ss_pred HhCCce-EEEcCCh
Q 025522 150 QTKFKG-VYADPNH 162 (251)
Q Consensus 150 ~~~~pf-l~sDp~~ 162 (251)
-.++|. ++.+...
T Consensus 107 v~~~Pt~~~~~~G~ 120 (148)
T 3p2a_A 107 IRSIPTIMLYRNGK 120 (148)
T ss_dssp CCSSSEEEEEETTE
T ss_pred CCccCEEEEEECCe
Confidence 345676 5555443
No 116
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=2.2e-06 Score=65.62 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=20.2
Q ss_pred CCcEEEEEEccCCChhhHHHHHHH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYL 119 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L 119 (251)
.++.+|++|++.||++|+...+.+
T Consensus 26 ~~k~vlv~f~a~wC~~C~~~~~~~ 49 (130)
T 2kuc_A 26 EDKLLFVDCFTTWCGPCKRLSKVV 49 (130)
T ss_dssp HSSCEEEEECCTTCTHHHHHHHHG
T ss_pred cCCeEEEEEECCCCccHHHHHHHh
Confidence 345677778899999999999988
No 117
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.36 E-value=8.4e-07 Score=68.04 Aligned_cols=68 Identities=7% Similarity=-0.017 Sum_probs=51.0
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChh
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHS 163 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ 163 (251)
+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.|.+..
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 3456778888899999999999999998887754 38999999886544433233346777 88887765
No 118
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.33 E-value=5.5e-06 Score=62.15 Aligned_cols=44 Identities=18% Similarity=0.067 Sum_probs=35.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
.++.+|++|++.||++|+...+.|.++.+++.. ++.++.|..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~ 59 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE 59 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 456677777899999999999999998888754 58888887654
No 119
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.32 E-value=3.2e-06 Score=64.29 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=32.5
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
.++.+|++|++.||++|+...+.+.+..+++. ++.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 34556666779999999999999998877764 5777777665
No 120
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.30 E-value=6.5e-07 Score=69.57 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=52.6
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcC--CEEEEEeCCCHHHHHHHHHHhCCce-E
Q 025522 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFKG-V 156 (251)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~g--v~vVaVs~~~~~~~~~f~~~~~~pf-l 156 (251)
+.+.+++.+. ++...++.+|++|++.||++|+...+.|.++..++...+ +.++.|..+....+.+-..-.++|. +
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 96 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIK 96 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEE
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEE
Confidence 4444554433 334556788899999999999999999999999887764 7788887765433322222235666 4
Q ss_pred EEc
Q 025522 157 YAD 159 (251)
Q Consensus 157 ~sD 159 (251)
+.+
T Consensus 97 ~~~ 99 (140)
T 2dj1_A 97 ILK 99 (140)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 121
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.28 E-value=2.6e-07 Score=69.46 Aligned_cols=74 Identities=9% Similarity=0.038 Sum_probs=52.9
Q ss_pred CCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhHH
Q 025522 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSSY 165 (251)
Q Consensus 90 ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ly 165 (251)
+.+..++++.+|++|++.||+.|+...+.|.++..++. ++.++.|..+....+.+-..-.++|. ++.+..+.+.
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~ 91 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVA 91 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEE
Confidence 33444557788888899999999999999999888774 58999998886544443333346776 6666444333
No 122
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.26 E-value=1.9e-07 Score=77.10 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=51.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH-HHHHHHH--HhCCce-EEEcCChhHHHHc
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSE--QTKFKG-VYADPNHSSYEAL 168 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~-~~~~f~~--~~~~pf-l~sDp~~~ly~al 168 (251)
+++++|+.|++.|||+|+.+++.|.+++.+.. ++.++.|..+... .+++|.. -.++|- ++.|.+..+...+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE
Confidence 45788888999999999999999999887653 6888888766432 3334431 236888 8888875443333
No 123
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.26 E-value=1.5e-06 Score=67.86 Aligned_cols=68 Identities=9% Similarity=0.052 Sum_probs=50.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSS 164 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~l 164 (251)
.++.+|++|++.||++|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|. ++.|.+.++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE
Confidence 456677777899999999999999998887753 49999999886543332223346777 888877664
No 124
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.25 E-value=8e-07 Score=66.00 Aligned_cols=72 Identities=8% Similarity=0.031 Sum_probs=48.7
Q ss_pred CCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChh
Q 025522 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHS 163 (251)
Q Consensus 90 ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ 163 (251)
+.+..+.++.+|++|++.||++|+...+.|.++..++ .++.++.|..+....+.+-..-.++|- ++.+..+.
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY--NYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKE 83 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC--TTEEEEEEEECCC---------CCCCEEEEEETTEE
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc--CCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeE
Confidence 4455556778889999999999999999999988877 378999998876543333223446776 55554433
No 125
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.21 E-value=4.7e-07 Score=69.74 Aligned_cols=84 Identities=11% Similarity=0.105 Sum_probs=54.4
Q ss_pred EEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH-cCCEEEEEeCCCHHHHHHHHHHhCCce-E
Q 025522 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFKG-V 156 (251)
Q Consensus 79 ~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-~gv~vVaVs~~~~~~~~~f~~~~~~pf-l 156 (251)
.+.+.+++.+...-. ..++.+|++|++.||++|+...+.|.++..++.. .++.++.|..+....+.+-..-.++|. +
T Consensus 8 ~v~~l~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 86 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVM-DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIY 86 (133)
T ss_dssp SSEECCTTTCCCCCT-CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEE
T ss_pred ceEEEcCCCHHHHhc-cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEE
Confidence 344455544332221 2367788888999999999999999999888865 357788887765432211112235677 7
Q ss_pred EEcCChh
Q 025522 157 YADPNHS 163 (251)
Q Consensus 157 ~sDp~~~ 163 (251)
+.|.+..
T Consensus 87 ~~~~g~~ 93 (133)
T 2dj3_A 87 FAPSGDK 93 (133)
T ss_dssp EECTTCT
T ss_pred EEeCCCc
Confidence 7776654
No 126
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.20 E-value=1.4e-06 Score=66.03 Aligned_cols=74 Identities=8% Similarity=-0.025 Sum_probs=53.2
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhHHHHcC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSSYEALS 169 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alG 169 (251)
+.++.+|++|++.||++|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|. ++.|.+..+.+..|
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g 93 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWE 93 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccceeec
Confidence 3456777888899999999999999998888754 69999999886543332222335777 77777766544444
No 127
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.19 E-value=8e-07 Score=71.94 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=32.3
Q ss_pred CCcEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
.+++||+.|++.||++|+.....+ .++.+.+++ ++.++.|..+..
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 467899999999999999864433 333333333 789999988753
No 128
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.17 E-value=1.7e-06 Score=69.27 Aligned_cols=68 Identities=12% Similarity=0.097 Sum_probs=47.8
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSS 164 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~l 164 (251)
.++.+|+.|++.||++|+.+.+.|.++.+++... +.++.|..+....+.+-..-.++|. ++......+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEE
Confidence 4678888999999999999999999988877443 8888998876543333222335666 543344444
No 129
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.17 E-value=8.3e-07 Score=67.90 Aligned_cols=72 Identities=13% Similarity=0.024 Sum_probs=52.0
Q ss_pred cCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhHH
Q 025522 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSSY 165 (251)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ly 165 (251)
++.++.+|++|++.||+.|+...+.|.++.+++...++.++.|..+....+.+-..-.++|. ++.+....++
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~ 102 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKID 102 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEE
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEe
Confidence 34566777788899999999999999999888877789999999987544333223346776 5555443333
No 130
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.16 E-value=1.4e-06 Score=65.05 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
++.+|++|++.||++|+...+.|.++..+++..++.++.|..+....+.+-..-.++|. ++..
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 84 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIH 84 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEE
Confidence 56778888899999999999999999888766789999999886543332222235666 4443
No 131
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=1.6e-06 Score=66.40 Aligned_cols=68 Identities=12% Similarity=0.016 Sum_probs=50.2
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH---cCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHS 163 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ 163 (251)
.++.+|++|++.||++|+...+.|.++..++.+ .++.++.|..+....+.+-..-.++|. ++.|..+.
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 95 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGES 95 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCc
Confidence 456788888899999999999999999888864 568899998876533332223346777 77776553
No 132
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.16 E-value=1.7e-06 Score=63.45 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=48.2
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHS 163 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ 163 (251)
.++.+|++|++.||++|+...+.+.+...++... +.++.|..+....+.+-..-.++|. ++.+..+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 85 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQP 85 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEE
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeE
Confidence 4456677777999999999999999998887644 9999999887654443333346676 55554433
No 133
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.15 E-value=1.4e-06 Score=66.31 Aligned_cols=64 Identities=9% Similarity=0.076 Sum_probs=47.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPN 161 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~ 161 (251)
.++.+|++|++.||++|+...+.|.++..++.. +.++.|..+....+.+-..-.++|. ++....
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 94 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTFQFFKKG 94 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEEESSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEEEEEeCC
Confidence 456778888899999999999999998887744 9999999886644433333345676 444433
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.13 E-value=7.4e-07 Score=65.58 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=44.9
Q ss_pred cCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 34556677778899999999999999998887754 38999999876543322222235666 444
No 135
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.12 E-value=1.9e-06 Score=65.84 Aligned_cols=59 Identities=5% Similarity=-0.128 Sum_probs=44.7
Q ss_pred EEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+|++|++.||++|+...+.|.++..++...++.++.|..+....+.+-..-.++|. ++.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEE
Confidence 77888899999999999999999988877789999999876543332222235666 444
No 136
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.11 E-value=2.1e-06 Score=62.66 Aligned_cols=65 Identities=17% Similarity=0.136 Sum_probs=46.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
.++.+|++|++.||+.|+...+.|.+...++. ++.++.|..+....+.+-..-.++|. ++.+...
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEeCCc
Confidence 35567777779999999999999999887764 89999999986543333223345776 5555333
No 137
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.10 E-value=2.8e-06 Score=63.26 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=43.2
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|.
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 80 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPT 80 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccE
Confidence 3456677788899999999999999998887754 49999999886543322212234565
No 138
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.10 E-value=5e-08 Score=79.48 Aligned_cols=92 Identities=12% Similarity=0.185 Sum_probs=56.6
Q ss_pred CCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH--HHHHHHH-h
Q 025522 75 LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ--ARTFSEQ-T 151 (251)
Q Consensus 75 ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~--~~~f~~~-~ 151 (251)
.+++...+.+ +.+..... .++.||+.|++.||++|+.+.+.|.+..... ..++.++.|..+.... ...|.-. .
T Consensus 27 ~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~~~ 102 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSPDGG 102 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCTTCS
T ss_pred cccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhcccCC
Confidence 4444444433 33333332 3556777778999999999999999976543 3457778887765432 2333211 3
Q ss_pred CCce-EEEcCChhHH-HHcCC
Q 025522 152 KFKG-VYADPNHSSY-EALSF 170 (251)
Q Consensus 152 ~~pf-l~sDp~~~ly-~alGl 170 (251)
.+|. ++.|++.++. +..|.
T Consensus 103 ~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 103 YIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp CSSEEEEECTTSCBCTTCCCT
T ss_pred cCCeEEEECCCCCEEEEEeCC
Confidence 4788 8889876543 33443
No 139
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.09 E-value=2.1e-06 Score=64.88 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=55.4
Q ss_pred EecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH----cCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 80 l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~----~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+.+.+++.+...- ...++.+|+.|++.||++|+...+.|.++..++.. .++.++.|..+..+ +.+ .-.++|-
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt 84 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPT 84 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSE
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCe
Confidence 4445555433221 23456777888899999999999999999998875 37889999887543 222 3446777
Q ss_pred -EEEcCChh
Q 025522 156 -VYADPNHS 163 (251)
Q Consensus 156 -l~sDp~~~ 163 (251)
++.|.+..
T Consensus 85 ~~~~~~~~~ 93 (121)
T 2djj_A 85 IKLYPAGAK 93 (121)
T ss_dssp EEEECSSCT
T ss_pred EEEEeCcCC
Confidence 77777654
No 140
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.09 E-value=4.5e-06 Score=61.47 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=44.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|++.||++|+...+.|.+...++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 456677778899999999999999998887754 49999999876543332222235665 444
No 141
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.04 E-value=2.9e-06 Score=62.20 Aligned_cols=67 Identities=12% Similarity=0.144 Sum_probs=48.2
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSS 164 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~l 164 (251)
+++.+|++|++.||++|+...+.+.++..++. ++.++.|..+....+.+...-.++|. ++.+.++.+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 86 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKV 86 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEE
Confidence 35667777789999999999999999888774 49999999887654443334446776 554544433
No 142
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.04 E-value=4.4e-06 Score=62.01 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=42.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
++.+|++|++.||++|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccE
Confidence 45677777789999999999999998888754 79999999886543332222334665
No 143
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.04 E-value=5e-06 Score=61.70 Aligned_cols=61 Identities=11% Similarity=0.139 Sum_probs=46.1
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
++.+|++|++.||++|+...+.|.+...++. ++.++.|..+....+.+-..-.++|. ++.+
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 87 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTFIFLK 87 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEEEEEe
Confidence 5678888889999999999999999887764 79999999886544433334457787 4444
No 144
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.02 E-value=1.9e-06 Score=63.01 Aligned_cols=62 Identities=10% Similarity=0.044 Sum_probs=42.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|.+.||+.|+...+.|.+...++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 345667777799999999999999998887754 48999998876543322222235665 443
No 145
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.02 E-value=3.8e-06 Score=64.72 Aligned_cols=58 Identities=14% Similarity=0.128 Sum_probs=42.5
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.++.+|++|++.||++|+...+.|.++..++. ++.++.|..+....+.+-..-.++|.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 94 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQAMPT 94 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCccCE
Confidence 35677888889999999999999999888774 78999998876533322112234565
No 146
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.01 E-value=1.5e-05 Score=61.06 Aligned_cols=67 Identities=7% Similarity=-0.139 Sum_probs=47.6
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH----cCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~----~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
.++.+|+.|++.||++|+...+.+.++..++.. .++.++.|..+....+.+-..-.++|- ++.+.+.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCC
Confidence 367788888899999999999999999887753 358888888876543332222335666 6666543
No 147
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.00 E-value=5.8e-06 Score=61.94 Aligned_cols=60 Identities=10% Similarity=0.119 Sum_probs=44.2
Q ss_pred cCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.+.++.+|++|++.||+.|+...+.|.++.+++. ++.++.|..+....+.+-..-.++|.
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 3456778888889999999999999999888764 69999999886543332222335665
No 148
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.98 E-value=5.5e-06 Score=69.85 Aligned_cols=70 Identities=10% Similarity=0.114 Sum_probs=51.2
Q ss_pred CccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcC--CEEEEEeCCCHHHHHHHHHHhCCce-EEEcCC
Q 025522 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFKG-VYADPN 161 (251)
Q Consensus 92 ~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~g--v~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~ 161 (251)
++..+++.+|+.|++.||++|+...+.|.++..++...+ +.++.|..+....+.+-..-.++|. ++.+.+
T Consensus 27 ~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 99 (241)
T 3idv_A 27 NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKG 99 (241)
T ss_dssp HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCC
Confidence 344567788999999999999999999999999998776 8888888876543332222335666 555543
No 149
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.98 E-value=6.1e-06 Score=61.07 Aligned_cols=61 Identities=8% Similarity=0.099 Sum_probs=44.1
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|++.||++|+...+.|.++..++ .++.++.|..+....+.+-..-.++|- ++.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 4566778888999999999999999988877 469999999886543332222235665 444
No 150
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.97 E-value=7e-06 Score=62.37 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=44.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|+..||+.|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|. ++.
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 92 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTVLAM 92 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEEEEE
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEEEEE
Confidence 445677777799999999999999998887754 59999999886543332222235665 443
No 151
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.97 E-value=1.1e-05 Score=59.10 Aligned_cols=63 Identities=10% Similarity=0.026 Sum_probs=44.5
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+.++.+|++|++.||+.|+...+.|.+..+++.. ++.++.|..+....+.+-..-.++|. ++.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 3456677777799999999999999998888754 68999999876533222222235666 443
No 152
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.97 E-value=1.8e-06 Score=63.37 Aligned_cols=63 Identities=10% Similarity=0.028 Sum_probs=45.1
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+.++.+|++|+..||+.|+...+.|.+...++.. ++.++.|..+....+.+-..-.++|. ++.
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEE
Confidence 3456677777799999999999999998887753 59999999876543332223335676 444
No 153
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.97 E-value=6.8e-06 Score=60.12 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=44.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|++.||+.|+...+.|.+...++. .++.++.|..+....+.+-..-.++|. ++.
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 45677777789999999999999999888775 579999999886543332222335665 443
No 154
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.97 E-value=9.4e-06 Score=60.23 Aligned_cols=63 Identities=8% Similarity=0.075 Sum_probs=45.0
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+.++.+|++|+..||++|+...+.|.++..++... +.++.|..+....+.+-..-.++|. ++.
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 34566777778999999999999999988877543 9999999886543322222235666 444
No 155
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.96 E-value=2.2e-06 Score=66.98 Aligned_cols=59 Identities=15% Similarity=0.154 Sum_probs=42.3
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
++.+|++|++.||++|+...+.|.++..++ ++.++.|..+....+.+-..-.++|. ++.
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEEEEE
Confidence 567888889999999999999998876655 68888888876543332222335676 444
No 156
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.95 E-value=1.2e-06 Score=70.57 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=46.5
Q ss_pred ccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
+.+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.+
T Consensus 60 ~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 126 (155)
T 2ppt_A 60 AERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQGIPAFILFH 126 (155)
T ss_dssp HTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCSSSEEEEEE
T ss_pred HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCcCCEEEEEe
Confidence 334556677777899999999999999999888864 49999999886543322222235666 4444
No 157
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.94 E-value=7.8e-06 Score=59.99 Aligned_cols=63 Identities=6% Similarity=0.009 Sum_probs=47.2
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
..++.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEE
Confidence 3467778888899999999999999999888754 58899999886654443334446776 444
No 158
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.18 E-value=1.2e-06 Score=63.97 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=41.3
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+.++.+|++|...|||.|+...+.+.+...++.. ++.++.|..+....+.+-..-.++|.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRSIPT 76 (106)
Confidence 3456677777799999999999999988887754 57777777765433322222335665
No 159
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.94 E-value=4e-06 Score=61.94 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=45.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHc--CCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~--gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
++.+|++|++.||++|+...+.+.+...++... ++.++.|..+....+.+-..-.++|. ++.+...
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 89 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGK 89 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCc
Confidence 456777888999999999999999988776543 78888888876544332223335666 4444343
No 160
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.94 E-value=7.8e-06 Score=60.44 Aligned_cols=67 Identities=10% Similarity=0.138 Sum_probs=47.2
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
+.++.+|++|++.||++|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++.+...
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 87 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGE 87 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTE
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEEEECCE
Confidence 3456677777899999999999999998887753 59999999887654433223335666 4444333
No 161
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.94 E-value=6e-06 Score=61.75 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=43.5
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
++.+|++|+..||+.|+...+.|.++..++. ++.++.|..+....+.+-..-.++|. ++..
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 89 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPTFLFIK 89 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcEEEEEe
Confidence 4567777779999999999999999888775 79999999886543322222235665 4443
No 162
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.94 E-value=5.4e-06 Score=62.91 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=38.0
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~ 142 (251)
+.++.+|++|++.||+.|+...+.|.++.+++.. +.++.|..+...
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~ 73 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESP 73 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH
Confidence 3456778888899999999999999998887643 999999988653
No 163
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.93 E-value=8.5e-06 Score=59.01 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=44.1
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|+..||++|+...+.|.+..+++.. +.++.|..+....+.+-..-.++|. ++.
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 456777778899999999999999998887754 9999999886543332222335666 443
No 164
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.93 E-value=7.3e-06 Score=65.29 Aligned_cols=63 Identities=11% Similarity=0.122 Sum_probs=46.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPN 161 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~ 161 (251)
++.+|++|++.||++|+...+.|.++..++ .++.++.|..+....+.+-..-.++|. ++.|..
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 95 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNS 95 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECC
Confidence 567777888999999999999999988776 479999999886543333223346777 777733
No 165
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=3.2e-06 Score=65.87 Aligned_cols=46 Identities=13% Similarity=0.013 Sum_probs=39.0
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~ 142 (251)
++.+|++|++.||++|+...+.|.++..++...++.++.|..+...
T Consensus 26 ~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~ 71 (137)
T 2dj0_A 26 RVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT 71 (137)
T ss_dssp TSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH
Confidence 3467888889999999999999999998887667999999887653
No 166
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.91 E-value=5.7e-06 Score=64.25 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=40.4
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~ 153 (251)
++.+|++|++.||++|+...+.|.++..++ .++.++.|..+... ++++++++
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~~~---~~~~~~~v 97 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDELS---DFSASWEI 97 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSH---HHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcccH---HHHHHcCC
Confidence 456777778999999999999999988876 37999999988653 34444444
No 167
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.91 E-value=7.3e-06 Score=61.99 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=40.7
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
++.+|++|++.||++|+...+.|.++..++. ++.++.|..+....+.+-..-.++|.
T Consensus 34 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 34 KKLVVIDFTASWCGPCRIMAPVFADLAKKFP--NAVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHcCCCcccE
Confidence 4556667779999999999999999888765 39999999886533322112234555
No 168
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.91 E-value=6.7e-06 Score=60.63 Aligned_cols=63 Identities=11% Similarity=0.015 Sum_probs=44.3
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
+.++.+|++|++.||++|+...+.|.+...++.. .+.++.|..+....+.+-..-.++|. ++.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 3456778888899999999999999998887754 48888888875433222112235666 444
No 169
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.90 E-value=6.7e-06 Score=61.95 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=41.7
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.++.+|++|++.||++|+...+.|.++..++ ++.++.|..+....+.+-..-.++|.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccce
Confidence 4566777788999999999999999887766 89999999886543322222234665
No 170
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.89 E-value=1.2e-05 Score=60.47 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=44.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
.++.+|++|.+.||++|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|. ++.+
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 92 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLILFK 92 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEEEE
Confidence 455677777899999999999999998887753 59999999886543322222235666 4444
No 171
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.89 E-value=9.8e-06 Score=63.49 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=45.5
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
+.++.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+....+.+-..-.++|. ++..
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 86 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPWTAEKYGVQGTPTFKFFC 86 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHHHHHHHTCCEESEEEEEE
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHhHHHHCCCCcCCEEEEEe
Confidence 3456777778899999999999999999888765 49999999886543332222234555 4433
No 172
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.85 E-value=3e-05 Score=66.26 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=48.6
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH--cCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQT---KFKG-VYADP 160 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp 160 (251)
.++.+|+.|++.||++|+...+.+.+++.++.. .++.++.|.++.. ...+.++++ ++|- ++.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTTCCSSSEEEEECT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcCCCccCEEEEEeC
Confidence 447888888999999999999999999999876 4799999998432 122334444 5776 77776
No 173
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.83 E-value=3.5e-06 Score=66.88 Aligned_cols=70 Identities=16% Similarity=0.086 Sum_probs=49.7
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcCChhHHHHcC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG-VYADPNHSSYEALS 169 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp~~~ly~alG 169 (251)
.++.+|+.|++.||++|+...+.|.++.+++.. .+.++.|..+.... +++++ ++|- ++.+....+...+|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~---~~~~~~i~~~Pt~~~~~~G~~v~~~~g 95 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPD---FNKMYELYDPCTVMFFFRNKHIMIDLG 95 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCT---TTTSSCSCSSCEEEEEETTEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHH---HHHHcCCCCCCEEEEEECCcEEEEecC
Confidence 356788888999999999999999999888743 48899998875432 23333 4665 55555555544444
No 174
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.80 E-value=2.3e-05 Score=59.17 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=44.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH---HHHHHHHHHhC---Cce-EEEcCC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTK---FKG-VYADPN 161 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~---~~~~~f~~~~~---~pf-l~sDp~ 161 (251)
+.++.+|++|++.|||+|+...+.|.++..++ +..++.|..+.. +...+++++++ +|- ++.+..
T Consensus 27 ~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G 97 (118)
T 1zma_A 27 DKKETATFFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDG 97 (118)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETT
T ss_pred hCCCeEEEEEECCCCccHHHHHHHHHHHHHhc---CCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECC
Confidence 34566788888999999999999999887765 356677765543 45556777765 454 444433
No 175
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.78 E-value=7.1e-06 Score=64.01 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=44.3
Q ss_pred EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH------HHHHHHHHHhC---Cce-EEEcCCh
Q 025522 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV------EQARTFSEQTK---FKG-VYADPNH 162 (251)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~------~~~~~f~~~~~---~pf-l~sDp~~ 162 (251)
.+|++|++.||++|+.+.+.|.++..++. +.++.|..++. +...+++++++ +|- ++.+...
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~ 103 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGR 103 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTE
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCE
Confidence 67888889999999999999998887764 88999988442 34455555554 555 5555333
No 176
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.77 E-value=1.9e-05 Score=59.62 Aligned_cols=45 Identities=24% Similarity=0.207 Sum_probs=36.1
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~ 142 (251)
++++||+.|++.||++|+...+.+.++.+++ .++.++-|..+...
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~d~~~ 63 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSM--SDVVFLKVDVDECE 63 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC--TTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhcc--CCeEEEEEecccCH
Confidence 3578888889999999999999999887765 35777788776543
No 177
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.76 E-value=2.1e-05 Score=61.21 Aligned_cols=62 Identities=10% Similarity=-0.065 Sum_probs=44.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
.++ +|++|++.||++|+...+.|.++..++.. ++.++.|..+....+.+-..-.++|. ++..
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 112 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLFR 112 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEEe
Confidence 445 78888899999999999999998888754 58999999886543332222335666 4443
No 178
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.76 E-value=8.5e-06 Score=63.16 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=38.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
+.++.+|++|++.||++|+...+.|.++.+++.. ++.++.|..+..
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 4567788888999999999999999998887754 488999988754
No 179
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.76 E-value=4.1e-05 Score=59.11 Aligned_cols=59 Identities=8% Similarity=0.081 Sum_probs=43.5
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
..++.+|++|++.||+.|+...+.|.++..++ .++.++.|..+....+.+-..-.++|.
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~~l~~~~~v~~~Pt 93 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNSEIVSKCRVLQLPT 93 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCHHHHHHcCCCcccE
Confidence 45566777788999999999999999988877 369999999986543332222335665
No 180
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.73 E-value=5e-06 Score=72.53 Aligned_cols=62 Identities=6% Similarity=-0.026 Sum_probs=45.6
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
++.||+.|++.||++|+...+.+.+...++.. .+.++.|..+....+.+-..-.++|. ++..
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 88 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTVYLFQ 88 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEEEEEE
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeEEEEE
Confidence 67788888999999999999999999888763 49999999886543322222335666 4443
No 181
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.71 E-value=8.2e-06 Score=69.15 Aligned_cols=67 Identities=10% Similarity=0.022 Sum_probs=47.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
+.++.+|+.|++.||++|+...+.|.++..++... +.++.|..+....+.+-..-.++|. ++.+..+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 95 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGE 95 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTCCSBSEEEEEETTE
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCCCcCCEEEEEECCe
Confidence 45667788888999999999999999999887643 8999999886533322112235666 5555333
No 182
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.70 E-value=1.4e-05 Score=59.89 Aligned_cols=61 Identities=11% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|++|++.||++|+...+.|.++..++. ++.++.|..+....+.+-..-.++|. ++.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 44667777889999999999999988877653 68888888765433322222335666 444
No 183
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.69 E-value=3.4e-05 Score=59.06 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=35.7
Q ss_pred CcEEEEEEccC-------CChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 97 ~~vVLvF~R~~-------~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
++.+|+.|++. ||++|+...+.|.++..++.. ++.++.|..++
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~ 73 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGE 73 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCC
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCC
Confidence 56778888899 999999999999998776643 78899998853
No 184
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.84 E-value=6.1e-06 Score=63.26 Aligned_cols=73 Identities=14% Similarity=0.329 Sum_probs=47.4
Q ss_pred CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCCCH---HHHHHHHHHhCCce-EE
Q 025522 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFKG-VY 157 (251)
Q Consensus 85 G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~~~---~~~~~f~~~~~~pf-l~ 157 (251)
.+.+.+... .++.+|++|++.||++|+...+.+ .++...+.. ++.++.|..++. +-.+.| .-.++|. ++
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~-~v~~~Pt~~~ 84 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRY-RVPGTPTFVF 84 (130)
Confidence 444555543 456777888899999999999988 666665543 577777777432 222222 2336777 88
Q ss_pred EcCC
Q 025522 158 ADPN 161 (251)
Q Consensus 158 sDp~ 161 (251)
.|++
T Consensus 85 ~d~~ 88 (130)
T 2lst_A 85 LVPK 88 (130)
Confidence 8764
No 185
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.64 E-value=6.6e-05 Score=66.88 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=47.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcCChh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG-VYADPNHS 163 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp~~~ 163 (251)
.++.+|+.|++.||++|+..++.+.++..++... +.++.|.++..+ ..++++++ ++|- ++.+.+..
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~-~~~l~~~~~I~~~Pt~~~~~~g~~ 103 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNK-NKALCAKYDVNGFPTLMVFRPPKI 103 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTT-THHHHHHTTCCBSSEEEEEECCCC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCcc-CHHHHHhCCCCccceEEEEECCce
Confidence 4567788888999999999999999999888643 899999987321 13344444 4665 66665543
No 186
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.54 E-value=6.1e-05 Score=63.00 Aligned_cols=65 Identities=9% Similarity=0.042 Sum_probs=46.7
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH 162 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~ 162 (251)
.++.+|++|++.||++|+...+.+.++..++.. .+.++.|..+....+..-..-.++|. ++. ++.
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G 178 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSG 178 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEE-CTT
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEEE-ECC
Confidence 456788888899999999999999998888753 49999999886543332223335666 444 443
No 187
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.45 E-value=0.0001 Score=61.69 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=38.3
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH---cCCEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~gv~vVaVs~~~~ 141 (251)
+++++|+.|++.||++|+...+.+.++..++.. .++.++.|..+..
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 457768888899999999999999999888874 4788888887654
No 188
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.43 E-value=0.00014 Score=58.64 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=36.3
Q ss_pred CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 85 G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
+..+.+++- +.+++|+.|..+|||+|+...+.|.++..+..+ ++++.+.
T Consensus 12 ~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 334455553 678899999999999999999999888776433 5555544
No 189
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.42 E-value=0.00018 Score=59.61 Aligned_cols=69 Identities=10% Similarity=0.179 Sum_probs=45.8
Q ss_pred CCcEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCCCH-HHHHHHH-------HHhCCce-EEEcCChh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQARTFS-------EQTKFKG-VYADPNHS 163 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~~~-~~~~~f~-------~~~~~pf-l~sDp~~~ 163 (251)
.++.||+.|++.||+.|+...++. .+..+.+. .++.+|-|-.+.. +..+.|. ...++|. ++.|++.+
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-EAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-HHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHH-hcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 356677888899999999977632 22333333 3577777777644 4344453 3458999 99998876
Q ss_pred HH
Q 025522 164 SY 165 (251)
Q Consensus 164 ly 165 (251)
..
T Consensus 117 ~v 118 (173)
T 3ira_A 117 PF 118 (173)
T ss_dssp EE
T ss_pred ce
Confidence 54
No 190
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.41 E-value=0.00021 Score=68.07 Aligned_cols=64 Identities=13% Similarity=0.131 Sum_probs=46.6
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHc-C------CEEEEEeCCCHHHHHHHHHHhCCce-EEEcCC
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVEQARTFSEQTKFKG-VYADPN 161 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-g------v~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~ 161 (251)
+++|+.|++.||++|+...+.+.++..++... | +.++.|..+....+.+-..-.++|- ++.+++
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~g 114 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPR 114 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECC
Confidence 56788888999999999999999999888643 3 8999999886533322222235676 555543
No 191
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.41 E-value=5.7e-05 Score=61.16 Aligned_cols=75 Identities=9% Similarity=0.155 Sum_probs=45.7
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHH--HHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCCh-hHHHHcCCcc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNH-SSYEALSFVS 172 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~--~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~-~ly~alGl~~ 172 (251)
++.||+.|++.||++|+...+.+.+..+ ++.+.++..|-|-.++.+....| .-.++|- ++.|++. .+++..|...
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~~~ 122 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGRYS 122 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCSCT
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCCcC
Confidence 5667778889999999999999887532 22223455555532222222222 2247887 8889654 4555566533
No 192
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.40 E-value=4.1e-05 Score=56.85 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=44.7
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHc--CCEEEEEeCCCHH-HHHHHHHHhCCce-EEEc
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSVE-QARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~--gv~vVaVs~~~~~-~~~~f~~~~~~pf-l~sD 159 (251)
+.++.+|++|++.||++|+...+.+.+...++... ++.++.|..+... -.++| .-.++|. ++..
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~-~v~~~Pt~~~~~ 89 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQY-GVRGYPTIKFFR 89 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHH-TCCSSSEEEEEE
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHC-CCCcccEEEEEe
Confidence 34667888888999999999999999998888764 4777777766432 22333 2335776 4443
No 193
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.39 E-value=3e-05 Score=54.49 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=35.3
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
.+.|++|++.|||+|+...+.|.+...++. .++.++.|..+..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMEN 45 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCC
Confidence 356778889999999999999998877764 4688889988754
No 194
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.37 E-value=7.9e-06 Score=62.25 Aligned_cols=57 Identities=14% Similarity=0.118 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
++.+|++|+..||+.|+...+.|.++..++. ++.++.|..+....+.+-..-.++|.
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccce
Confidence 5567777789999999999999999888764 78888888875433222222335665
No 195
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.36 E-value=0.00015 Score=69.78 Aligned_cols=65 Identities=8% Similarity=-0.030 Sum_probs=49.5
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH--cCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQT---KFKG-VYADP 160 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp 160 (251)
+.++.+|+.|++.||++|+.+++.+.+++.++.. .++.++.|.++.. ...+.++++ ++|- ++.|+
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcCCcccCEEEEEcC
Confidence 3457888999999999999999999999999876 4799999998642 123344454 4665 77775
No 196
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.30 E-value=4.7e-05 Score=53.45 Aligned_cols=42 Identities=10% Similarity=0.092 Sum_probs=34.5
Q ss_pred EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
+.|++|++.|||+|+...+.|.+...++. .++.++.|..+..
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~ 44 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIMVD 44 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTTTC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECCCC
Confidence 35777889999999999999998877764 3688999988754
No 197
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.29 E-value=0.00036 Score=54.35 Aligned_cols=69 Identities=9% Similarity=-0.009 Sum_probs=46.3
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChhHHHHcCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHSSYEALSF 170 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl 170 (251)
++.+|+.|++.||++|+...+.|.++..++ .++.++.|..+... ++| .-.++|- ++.+....+.+..|.
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~~--~~~-~i~~~Pt~~~~~~G~~v~~~~G~ 99 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSCI--EHY-HDNCLPTIFVYKNGQIEGKFIGI 99 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSSC--SSC-CSSCCSEEEEESSSSCSEEEEST
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcCc--ccC-CCCCCCEEEEEECCEEEEEEEeE
Confidence 367888889999999999999999987766 36888888776542 111 1124665 555544444444443
No 198
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.24 E-value=0.00034 Score=58.64 Aligned_cols=67 Identities=9% Similarity=0.071 Sum_probs=47.9
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcC--CEEEEEeCCCHHHHHHHHHHhCCce-EEEcCC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFKG-VYADPN 161 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~g--v~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~ 161 (251)
..++.++++|++.||++|+...+.+.++..++...+ +.++.|..+....+.+-..-.++|- ++.+..
T Consensus 145 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 214 (241)
T 3idv_A 145 NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG 214 (241)
T ss_dssp HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECC
Confidence 345678888889999999999999999999887654 8888888776543332222235665 555444
No 199
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.21 E-value=0.00056 Score=64.46 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=49.8
Q ss_pred ccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcC
Q 025522 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG-VYADP 160 (251)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp 160 (251)
+.+.++.+|+.|++.||++|+...+.+.++..++...++.++.|.++.... .++++ ++|- ++.+.
T Consensus 27 ~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~---l~~~~~v~~~Pt~~~~~~ 95 (504)
T 2b5e_A 27 YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD---LCMEHNIPGFPSLKIFKN 95 (504)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH---HHHHTTCCSSSEEEEEET
T ss_pred HHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH---HHHhcCCCcCCEEEEEeC
Confidence 344567888888999999999999999999998877789999999986543 34444 5665 44433
No 200
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.20 E-value=0.00018 Score=59.11 Aligned_cols=45 Identities=20% Similarity=0.094 Sum_probs=37.3
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
..++||+.|++.||++|+...+-|.++.+++.. .+.++-|-.|..
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~ 84 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV 84 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC
Confidence 456889999999999999999999999888742 377888887754
No 201
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.14 E-value=0.00076 Score=58.06 Aligned_cols=47 Identities=4% Similarity=-0.135 Sum_probs=38.6
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH---cCCEEEEEeCCCHH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVE 142 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~---~gv~vVaVs~~~~~ 142 (251)
+++++|+.|++.|||+|+..++.|.++..++.. .++.+..|-.+...
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~ 186 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP 186 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH
Confidence 467888888999999999999999999888742 57888888876543
No 202
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.03 E-value=0.00075 Score=56.56 Aligned_cols=44 Identities=11% Similarity=-0.028 Sum_probs=36.6
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
+++++|+.|++.||++|+...+.+.++..++ .++.++.|..+..
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~ 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASEN 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCC
Confidence 4677788888999999999999999987776 3788888887654
No 203
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.02 E-value=0.00049 Score=58.08 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=31.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
+++++|+.|+..|||+|++..+.|.++.+ .+++++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEE
Confidence 46788888899999999999999887643 378888764
No 204
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.00 E-value=0.0002 Score=57.04 Aligned_cols=75 Identities=8% Similarity=-0.011 Sum_probs=37.8
Q ss_pred CCCccCCCcEEEEEEccCC--ChhhHHHHHHHHHcHHHHHHcCCE--EEEEeCCCHHHHHHHHHHh---CCce-EEEcCC
Q 025522 90 ISDLWKDRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSVEQARTFSEQT---KFKG-VYADPN 161 (251)
Q Consensus 90 ls~l~~~~~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~~gv~--vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp~ 161 (251)
+.++....+.+|+||.+.| |+.|+..++.|.++..++ .++. ++.|..+... +.++++ ++|- ++....
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~~---~la~~~~V~~iPT~~~fk~G 101 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQSE---AIGDRFNVRRFPATLVFTDG 101 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHHH---HHHHTTTCCSSSEEEEESCC
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCCH---HHHHhcCCCcCCeEEEEeCC
Confidence 3333333333555666766 999999999999998887 3577 8888766433 334444 5665 555333
Q ss_pred hhHHHHcC
Q 025522 162 HSSYEALS 169 (251)
Q Consensus 162 ~~ly~alG 169 (251)
+.+.+..|
T Consensus 102 ~~v~~~~G 109 (142)
T 2es7_A 102 KLRGALSG 109 (142)
T ss_dssp ----CEES
T ss_pred EEEEEEeC
Confidence 33333333
No 205
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.98 E-value=0.0003 Score=65.76 Aligned_cols=67 Identities=10% Similarity=0.189 Sum_probs=49.1
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCce-EEEcCChh
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQARTFSEQTKFKG-VYADPNHS 163 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp~~~ 163 (251)
.++.||+.|++.||++|+..++.|.++..++... ++.++.|..+..+-.+.| .-.++|- ++.+.+..
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~-~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPY-EVRGFPTIYFSPANKK 437 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTC-CCCSSSEEEEECTTCT
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhC-CCcccCEEEEEeCCCe
Confidence 3677888899999999999999999999988765 677777877654222222 2236777 77776654
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.98 E-value=0.0012 Score=45.44 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=25.8
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
.+.|++.||++|+...+.|.+...++. ..+.++.|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 456668899999999999988776653 234555443
No 207
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.90 E-value=0.0012 Score=60.22 Aligned_cols=57 Identities=7% Similarity=0.106 Sum_probs=43.6
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~-----~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
..++.+|+.|++.||++|+...+.+.++..++++ .++.++.|.++... +.++++++.
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~---~l~~~~~v~ 81 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS---DIAQRYRIS 81 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH---HHHHHTTCC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH---HHHHhcCCC
Confidence 3456788888899999999999999999988863 34888888887653 344455543
No 208
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.89 E-value=0.00025 Score=53.54 Aligned_cols=30 Identities=17% Similarity=0.326 Sum_probs=24.5
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHH
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~ 126 (251)
++.+|+.|++.||++|+...+.|.++..++
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 345567778999999999999999887655
No 209
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.89 E-value=0.00017 Score=62.94 Aligned_cols=68 Identities=10% Similarity=0.000 Sum_probs=46.6
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcCChhHHHHcCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG-VYADPNHSSYEALSF 170 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp~~~ly~alGl 170 (251)
++.||+.|++.||++|+...+.|.++..++. ++.++.|..+. ..+++++ ++|- ++.+....+.+..|.
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~----~~l~~~~~I~~~PTll~~~~G~~v~~~vG~ 204 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN----TGAGDRFSSDVLPTLLVYKGGELLSNFISV 204 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH----HCCTTSSCTTTCSEEEEEETTEEEEEETTG
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc----HHHHHHCCCCCCCEEEEEECCEEEEEEeCC
Confidence 5678888889999999999999999888774 58888887654 2233333 5666 444433333333443
No 210
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=96.82 E-value=0.0011 Score=59.72 Aligned_cols=61 Identities=7% Similarity=0.030 Sum_probs=43.7
Q ss_pred cCCCcEEEEEEccCCChhhHHHHHH-------HHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 94 WKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 94 ~~~~~vVLvF~R~~~Cp~C~~el~~-------L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.+..+.+|+.|++.||+ |+..+++ +.+...+++..++.++.|.++....+.+-..-.++|-
T Consensus 25 i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt 92 (350)
T 1sji_A 25 LKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGS 92 (350)
T ss_dssp HTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTE
T ss_pred HhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccce
Confidence 34567888888999999 9888888 6777777776689999999886543322222335665
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.68 E-value=0.0018 Score=60.40 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=42.1
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCC
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~ 153 (251)
+.+|+.|++.||++|+...+.+.+...++... +.++.|.++.... .++++++
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~---l~~~~~v 73 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTN---TCNKYGV 73 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHH---HHHHTTC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHH---HHHhcCC
Confidence 78888889999999999999999999888665 8889998886533 3445544
No 212
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.67 E-value=0.00029 Score=53.99 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=33.6
Q ss_pred CCCcEEEEEEccCCCh--------------hhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp--------------~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
+.++.+|+.|++.||+ +|+...+.+.++..++.. ++.++.|..+..
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 4567788888999999 999999999998887754 488888888764
No 213
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.65 E-value=0.0024 Score=57.19 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=36.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHc-CCEEEEEeCCC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGS 140 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-gv~vVaVs~~~ 140 (251)
..++.+|+.|++.||++|+..++.+.++..+++.. ++.++.|-.+.
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~ 311 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 311 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc
Confidence 34677888888999999999999999999888654 46666665543
No 214
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.64 E-value=0.0013 Score=65.25 Aligned_cols=62 Identities=6% Similarity=-0.146 Sum_probs=45.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|+.|++.||++|+..++.+.++..+++. ++.++.|..+....+.+-..-.++|- ++.
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 736 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 736 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCCCcCCEEEEE
Confidence 456677778899999999999999999888754 68999998876544333222336676 444
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.63 E-value=0.0026 Score=63.07 Aligned_cols=64 Identities=8% Similarity=-0.080 Sum_probs=46.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce-EEEcC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG-VYADP 160 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~sDp 160 (251)
.++.+++.|++.||++|+.+++.|.+.+.+++. .+.++.|..+....+.+...-.++|- ++.+.
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 518 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQ 518 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcC
Confidence 345677788899999999999999999998863 58999999876554443333345676 44443
No 216
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.57 E-value=0.0056 Score=50.06 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=34.1
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
+++++|+.|..+|||+|+...+.|.++.+++.. ++.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467888888899999999999999888777654 5777666654
No 217
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.49 E-value=0.0082 Score=49.85 Aligned_cols=63 Identities=17% Similarity=0.191 Sum_probs=41.5
Q ss_pred cEEEEEEcc-------CCChhhHHHHHHHHHcHHHHHH----cCCEEEEEeCCCHHHHHHHHHHhCCce--EEEcC
Q 025522 98 KAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG--VYADP 160 (251)
Q Consensus 98 ~vVLvF~R~-------~~Cp~C~~el~~L~~~~~~~~~----~gv~vVaVs~~~~~~~~~f~~~~~~pf--l~sDp 160 (251)
..||++|++ .||++|+...+.+.++..++.. ..+.++-|-.+....+.+-..-..+|- ++-+.
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCC
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCC
Confidence 457777777 5999999999999999888863 246666666665433333223335665 44443
No 218
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.47 E-value=0.0018 Score=51.88 Aligned_cols=56 Identities=4% Similarity=-0.039 Sum_probs=39.5
Q ss_pred CCcEEEEEEccCC--ChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce
Q 025522 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG 155 (251)
Q Consensus 96 ~~~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf 155 (251)
+++ ||+||++.| |++|+...+-|.++.+++....++++-|..|.. .+.+.++ ++|-
T Consensus 34 ~~~-vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~---~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 34 APD-GVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS---EAIGDRFGAFRFPA 94 (140)
T ss_dssp CSS-EEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH---HHHHHHHTCCSSSE
T ss_pred CCC-EEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC---HHHHHHcCCccCCE
Confidence 345 556999999 999999999999998887543377777766543 3344444 4565
No 219
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.40 E-value=0.00078 Score=57.35 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=34.2
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
+.||+.|++.||+.|+...+.|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 677778889999999999999999887773 7888888876
No 220
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.39 E-value=0.008 Score=46.36 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=25.6
Q ss_pred ccCCCcEEEEEEccCCChhhHHHHHHHHHcHH
Q 025522 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKD 124 (251)
Q Consensus 93 l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~ 124 (251)
+.+..+.+|+|+.+.||++|+.-.+.|.+...
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~ 51 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAYDQFNKFLY 51 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEECCcCHhHHHHHHHHHHHhc
Confidence 33346788899999999999999998877554
No 221
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.38 E-value=0.0023 Score=47.69 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH-H-HHHHHHHHhCC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-E-QARTFSEQTKF 153 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~-~-~~~~f~~~~~~ 153 (251)
++++ |++ |+..|||+|+...+.|.+...+ +.++-|..+.. + ....+.+++++
T Consensus 18 ~~~~-vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v 71 (116)
T 2e7p_A 18 SSAP-VVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGR 71 (116)
T ss_dssp TSSS-EEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred cCCC-EEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCC
Confidence 3444 444 7899999999999888775322 45555555442 1 22345555554
No 222
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.36 E-value=0.0054 Score=47.17 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=32.8
Q ss_pred EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
.||+.|++.||++|+...+.|.++.+++. +++++-|..+.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 78888889999999999999998877663 57777776654
No 223
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.35 E-value=0.0072 Score=48.21 Aligned_cols=58 Identities=12% Similarity=-0.039 Sum_probs=42.0
Q ss_pred CcEEEEEEccCCC--hhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 97 RKAVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 97 ~~vVLvF~R~~~C--p~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+..+|++||+.|| ++|+...+-|.++.+++.. .++++-|..|....+..=..-..+|-
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCccCCE
Confidence 3379999999999 9999999999999888743 47888888775543332222235665
No 224
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.30 E-value=0.0047 Score=43.33 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=25.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
+++|.+.|||+|+...+.|.++.. +.|+.+..+..+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~---~~~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAID---PSKYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSC---TTTEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHH---hcCCeEEEEEec
Confidence 455668999999999998877543 345565555554
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.26 E-value=0.0028 Score=59.62 Aligned_cols=61 Identities=15% Similarity=0.138 Sum_probs=41.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHH--cCCEEEEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~--~gv~vVaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
.++.+|+.|++.||++|+...+.+.++..++.. .++.++.|..+..+.. .| .-.++|- ++.
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~~-~v~~~Pt~~~~ 438 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-GV-VIEGYPTIVLY 438 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-SC-CCSSSSEEEEE
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-cC-CceecCeEEEE
Confidence 356677788899999999999999999888863 3566666665432212 22 2335666 444
No 226
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.26 E-value=0.0099 Score=48.42 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=31.8
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
+++++|+.|..+|||+|+...+.|.++..++.. ++.+.-+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEe
Confidence 568888999999999999999999877766543 45555444
No 227
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.19 E-value=0.013 Score=40.66 Aligned_cols=47 Identities=17% Similarity=0.332 Sum_probs=31.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
|++|...|||+|++..+.|.+ .|+.+..|..+......++..+++..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~~~~~~~~~~~~g~~ 49 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVDRVPEAAEALRAQGFR 49 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCC
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHhCCC
Confidence 456789999999987766654 57777788877543444444445543
No 228
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.13 E-value=0.0095 Score=49.39 Aligned_cols=57 Identities=5% Similarity=0.151 Sum_probs=40.9
Q ss_pred CCcEEEEEEccC-CChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce
Q 025522 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG 155 (251)
Q Consensus 96 ~~~vVLvF~R~~-~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf 155 (251)
+++++|++|... ||++|+...+.|.++.+. ...+.++.|..+.++. .+.++++ ++|-
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~~v~~~Pt 81 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRYRIDRAPA 81 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHTTCCSSSE
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHcCCCcCce
Confidence 468888888999 999999999999886643 3458889999887321 2334444 4565
No 229
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.06 E-value=0.0058 Score=51.00 Aligned_cols=46 Identities=7% Similarity=-0.005 Sum_probs=37.0
Q ss_pred CCcEEEEEE----ccCCChhhHHHHHHHHHcHHHHHH-cCCEEEEEeCCCH
Q 025522 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~----R~~~Cp~C~~el~~L~~~~~~~~~-~gv~vVaVs~~~~ 141 (251)
.++++|+|| |..||+.|+..++++.+.+.++.. ..+.++.|-++..
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~ 70 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH 70 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc
Confidence 468888888 688999999999999998777743 3588888877654
No 230
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.00 E-value=0.0059 Score=42.77 Aligned_cols=50 Identities=8% Similarity=0.167 Sum_probs=34.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHH-HHHHHHHHhC
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTK 152 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~-~~~~f~~~~~ 152 (251)
|+.|...|||+|+...+.|.++..+. .|+.+..|..+... ...++.++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~~~~~~~~l~~~~~ 53 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRAEGITKEDLQQKAG 53 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHHHTCCSHHHHHHTC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecccChHHHHHHHHHhC
Confidence 55678899999999999888876543 57888888664321 1234555555
No 231
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.95 E-value=0.0087 Score=44.29 Aligned_cols=69 Identities=19% Similarity=0.185 Sum_probs=40.6
Q ss_pred CCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhC--CceEEEcC
Q 025522 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK--FKGVYADP 160 (251)
Q Consensus 85 G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~--~pfl~sDp 160 (251)
|..-.|.......+ +|++|...|||+|+...+.|.++. .++.+.-|..++.+ ..+++++++ +|.++.|-
T Consensus 4 ~~~~~l~~~~~~~~-~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~-~~el~~~~g~~vP~l~~~g 74 (100)
T 1wjk_A 4 GSSGNLSASNRALP-VLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPE-NSTWYERYKFDIPVFHLNG 74 (100)
T ss_dssp CCCCCCCCSCCCCC-EEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSST-THHHHHHSSSSCSEEEESS
T ss_pred CcchhhhhccCCCC-EEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcc-hHHHHHHHCCCCCEEEECC
Confidence 33334444433334 455567899999998888776542 34888888877321 144455554 34355553
No 232
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.71 E-value=0.032 Score=37.80 Aligned_cols=47 Identities=17% Similarity=0.316 Sum_probs=31.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
+++|...|||+|++....|.+ .|+.+..|..+......++.++++..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~~~~~~~~~~~~~ 49 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMALGYV 49 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCB
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHcCCC
Confidence 456778999999987777654 46777777776544444444556543
No 233
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.67 E-value=0.019 Score=52.06 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=42.2
Q ss_pred CCCcEEEEEEccCCChhhHHHH------HHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce--EEEc
Q 025522 95 KDRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG--VYAD 159 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el------~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf--l~sD 159 (251)
+..+.+|+.|.+.||++|+..- +.+.+...+++..++.++.|-++....+.+-..-.++|- ++-+
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~ 100 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKE 100 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEET
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEEC
Confidence 3467788888899999984322 366667777766689999999886543332222235665 4443
No 234
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.53 E-value=0.03 Score=44.73 Aligned_cols=49 Identities=14% Similarity=0.063 Sum_probs=37.6
Q ss_pred EeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHc-CCEEEEEeC
Q 025522 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGP 138 (251)
Q Consensus 88 v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~-gv~vVaVs~ 138 (251)
+.+++- +.|+.|+.|.-++||+|+...+.+.+..+++.+. .++++....
T Consensus 20 ~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 20 LHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp EEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred cccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 445654 5788888899999999999999998887777444 477776554
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.39 E-value=0.016 Score=48.63 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=29.4
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaV 136 (251)
+++++|+.|...|||+|++..+.|.++. +.|++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~----~~~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYN----DLGITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHH----hCCcEEEEE
Confidence 4678888888999999999999887743 347887765
No 236
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.13 E-value=0.023 Score=43.26 Aligned_cols=39 Identities=21% Similarity=0.240 Sum_probs=29.2
Q ss_pred EEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
..|+.|...||++|+...+.|.++.++ .|+.+.-|-.+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDG 68 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCC
Confidence 357777899999999999888877654 356666666653
No 237
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=95.07 E-value=0.015 Score=47.35 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=31.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~ 138 (251)
++++.|+.|..+|||+|....+.|.++..++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467888888899999999999999887766532 466655543
No 238
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.97 E-value=0.088 Score=42.28 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=43.6
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHH---cHHHHHHcCCEEEEEeCCCHHHHHHHHHHh---CCce-EEEcCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKG-VYADPN 161 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~---~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~---~~pf-l~sDp~ 161 (251)
++.|++.|-+.||+.|+..-.+.-. ..+.+ +.+..+|-+..++.+ ..++.+++ ++|+ ++.|++
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~-~~~l~~~y~v~~~P~~~fld~~ 111 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEE-GQRYIQFYKLGDFPYVSILDPR 111 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHH-HHHHHHHHTCCSSSEEEEECTT
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHh-HHHHHHHcCCCCCCEEEEEeCC
Confidence 5677788889999999987665522 23333 347777788777653 44555555 5788 899997
No 239
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=94.84 E-value=0.069 Score=43.09 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
+.++.|+.|..++||+|....+.|.++..++.. .+.+..+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVP 64 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeC
Confidence 457788888899999999999999877666532 46665444
No 240
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.62 E-value=0.12 Score=36.61 Aligned_cols=43 Identities=16% Similarity=0.364 Sum_probs=30.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHh
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT 151 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~ 151 (251)
+++|...|||+|++....|.+ .|+....|-.+ .+...++.+.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~-------~~i~~~~vdv~-~~~~~~l~~~~ 50 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDK-------KGVKYTDIDAS-TSLRQEMVQRA 50 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHH-------HTCCEEEECSC-HHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC-HHHHHHHHHHh
Confidence 456778999999987666544 46777777777 54555666666
No 241
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=94.34 E-value=0.42 Score=46.80 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=46.4
Q ss_pred CccccCCCCCcEEec-CCCCeEeCCCccC--CCcEEEEEEccCCChhhHHHHHHHHHcH-------HHHHH------cCC
Q 025522 68 SEDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKK-------DVMDA------SGV 131 (251)
Q Consensus 68 ~~~~g~~ap~f~l~d-~~G~~v~ls~l~~--~~~vVLvF~R~~~Cp~C~~el~~L~~~~-------~~~~~------~gv 131 (251)
....|..+|++.|.. .+|+++.|.+++. ++..||+|--..-.+.+...+.++.+.. ..+.. .-+
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 557 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRI 557 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSE
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCcccee
Confidence 356899999999976 4899999999885 3566777643332344555555555433 22211 127
Q ss_pred EEEEEeCCC
Q 025522 132 ALVLIGPGS 140 (251)
Q Consensus 132 ~vVaVs~~~ 140 (251)
+++.|....
T Consensus 558 ~~~~i~~~~ 566 (665)
T 1pn0_A 558 DVITIHSCH 566 (665)
T ss_dssp EEEEEESSC
T ss_pred EEEEEecCC
Confidence 788886554
No 242
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.26 E-value=0.023 Score=43.92 Aligned_cols=28 Identities=14% Similarity=0.334 Sum_probs=20.9
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHH
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKD 124 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~ 124 (251)
...+||.|++.||++|+..-+++...++
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~~ 45 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQYP 45 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTGG
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhHH
Confidence 3567778889999999998776655543
No 243
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.25 E-value=0.054 Score=51.38 Aligned_cols=44 Identities=14% Similarity=0.127 Sum_probs=35.6
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~ 141 (251)
.+++.+.+|+..|||+|+...+.|.+...+.. ++.+..|-.+..
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~ 159 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF 159 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh
Confidence 35778899999999999999999988866543 788888877654
No 244
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=94.09 E-value=0.055 Score=39.41 Aligned_cols=22 Identities=27% Similarity=0.468 Sum_probs=16.7
Q ss_pred EEEEccCCChhhHHHHHHHHHc
Q 025522 101 VAFARHFGCVLCRKRADYLAAK 122 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~ 122 (251)
|++|...|||+|+...+.|.+.
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQL 35 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHS
T ss_pred EEEEEcCCCHhHHHHHHHHHHc
Confidence 3446689999999887777654
No 245
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=93.94 E-value=0.075 Score=45.35 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=33.0
Q ss_pred eEeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 87 ~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
.+.++.- +.+++|+.|...|||+|++..++|.+..+. -+++++.+.
T Consensus 89 ~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 89 WLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 4445542 568888888999999999999998775443 347765543
No 246
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.91 E-value=0.14 Score=39.31 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=51.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCCce-EEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKG-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~ 172 (251)
+.+|-..+|+.|++....| ++.|+..-.+-. .+.+.++++.++.+++. -+.......|+.+|+..
T Consensus 2 i~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWL-------NRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHH-------HHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 5678889999999987776 456766655543 35589999999989988 77788999999999764
No 247
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=93.75 E-value=0.12 Score=39.16 Aligned_cols=54 Identities=9% Similarity=0.221 Sum_probs=30.8
Q ss_pred EEEEccCCChhhHHH-HHHHHHcHHHHHHcC---CEEEEEeCCCH----HHHHHHHHHhCC---ceEEEcCC
Q 025522 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGSV----EQARTFSEQTKF---KGVYADPN 161 (251)
Q Consensus 101 LvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~g---v~vVaVs~~~~----~~~~~f~~~~~~---pfl~sDp~ 161 (251)
|++|...|||+|++. .+.| ++.| +....|..+.. +..+++.+.++. |-++.|-+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L-------~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi~g~ 91 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLF-------EKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGK 91 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred EEEEEcCCCcCHHHHHHHHH-------HHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEECCE
Confidence 344778999999987 4443 4445 66666655432 233345555554 33666543
No 248
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=93.63 E-value=0.2 Score=34.32 Aligned_cols=45 Identities=11% Similarity=0.243 Sum_probs=28.1
Q ss_pred EEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCC
Q 025522 102 AFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF 153 (251)
Q Consensus 102 vF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~~ 153 (251)
++|...|||+|++-...|.+ .|+....|..+. .+...++.+.++.
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~ 49 (82)
T 1fov_A 4 EIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGR 49 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSS
T ss_pred EEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCC
Confidence 44568999999987766654 355555555543 3444556666543
No 249
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=93.53 E-value=0.12 Score=38.57 Aligned_cols=52 Identities=17% Similarity=0.285 Sum_probs=30.2
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCE---EEEEeCCCH----HHHHHHHHHhCC---ceEEEc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV----EQARTFSEQTKF---KGVYAD 159 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~---vVaVs~~~~----~~~~~f~~~~~~---pfl~sD 159 (251)
|++|...|||+|++..+.|.+ .|+. +..|-.+.. +...++.+.++. |-++.|
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i~ 82 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFFG 82 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence 444678999999987766654 4444 555554422 333445555554 335555
No 250
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.52 E-value=0.27 Score=36.43 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=37.5
Q ss_pred ccCCCcEEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCCc-e--EEEcCC
Q 025522 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-G--VYADPN 161 (251)
Q Consensus 93 l~~~~~vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~~p-f--l~sDp~ 161 (251)
+....+ |++|..+ .|||+|++-...|.+ .|+....|-.+. .+..+++.+..+.+ + |+.|-+
T Consensus 11 ~i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ifi~g~ 79 (109)
T 1wik_A 11 LTNKAS-VMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGD 79 (109)
T ss_dssp HHTTSS-EEEEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEECSSS
T ss_pred HhccCC-EEEEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEEECCE
Confidence 334445 5567766 899999987776644 477777777764 33344455555533 3 666643
No 251
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=93.43 E-value=0.078 Score=43.51 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=31.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~ 138 (251)
.++++|+.|..+|||+|+...+.|.++.+++.. .+.+.-+-.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecC
Confidence 357888888899999999999998877666544 455444443
No 252
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=93.38 E-value=0.1 Score=40.18 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=51.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCCce-EEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKG-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~ 172 (251)
|.+|-..+|+.|++....|. +.|+..-.|-. .+.+.++++.++.+++. -+.......|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 75 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLSS 75 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcch
Confidence 56788999999999887774 45655444432 35689999999999988 77788999999999763
No 253
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=93.37 E-value=0.21 Score=36.68 Aligned_cols=57 Identities=14% Similarity=0.269 Sum_probs=32.4
Q ss_pred CCCcEEEEEEc----cCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCC---ceEEEc
Q 025522 95 KDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF---KGVYAD 159 (251)
Q Consensus 95 ~~~~vVLvF~R----~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~~---pfl~sD 159 (251)
+..+ |++|+. +.|||+|+.-...|.+ .|+....|-.+. ++..+.+.+.++. |-++.|
T Consensus 15 ~~~~-vvvf~~g~~~~~~C~~C~~~~~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~i~ 79 (105)
T 2yan_A 15 NKAS-VMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVK 79 (105)
T ss_dssp TSSS-EEEEESBCSSSBCTTHHHHHHHHHHH-------HTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEET
T ss_pred ccCC-EEEEEecCCCCCCCccHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHHHCCCCCCeEEEC
Confidence 3445 455665 3899999987666644 355655555543 3333344455553 336655
No 254
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=93.35 E-value=0.15 Score=39.24 Aligned_cols=66 Identities=18% Similarity=0.260 Sum_probs=52.0
Q ss_pred EEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCCce-EEEcCChhHHHHcCCcc
Q 025522 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKG-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~ 172 (251)
.+.+|-..+|+.|++....|. +.|+..-.|-. .+.+.++++.++.+.+. -+.+.....|+.+|+..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELD-------DLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHH-------HHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHHH-------HcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCccc
Confidence 467888999999999887764 55666555533 35689999999999988 66789999999999854
No 255
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.27 E-value=0.3 Score=34.47 Aligned_cols=45 Identities=22% Similarity=0.359 Sum_probs=29.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhC
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTK 152 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~ 152 (251)
+++|...|||+|++-...|.+ .|+....|..+. .+..+++.+.++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~l~~~~~ 53 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR-------KGAEFNEIDASATPELRAEMQERSG 53 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEESTTSHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHhC
Confidence 445668999999987666544 466666666654 344455666554
No 256
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=93.08 E-value=0.17 Score=39.00 Aligned_cols=65 Identities=15% Similarity=0.253 Sum_probs=51.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCC-ce-EEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKF-KG-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~-pf-l~sDp~~~ly~alGl~~ 172 (251)
+.+|-..+|+.|++....|. +.|+..-.|-. .+.+.++++.++.++ +. =+.......|+.+|+..
T Consensus 7 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE-------QQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------TTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHHH-------HcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 56788999999999887764 55655555432 356899999999999 87 56688899999999874
No 257
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=93.00 E-value=0.18 Score=38.73 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=51.8
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEE----eCCCHHHHHHHHHHhCCc-e-EEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI----GPGSVEQARTFSEQTKFK-G-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaV----s~~~~~~~~~f~~~~~~p-f-l~sDp~~~ly~alGl~~ 172 (251)
+.+|-..+|+.|++....|. +.|+..-.| .+-+.+.++.+.++.+++ . -+.+.....|+.+|+..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 56788999999999888775 456654444 234668999999999998 7 67788999999999875
No 258
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=92.86 E-value=0.077 Score=38.42 Aligned_cols=23 Identities=22% Similarity=0.502 Sum_probs=18.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcH
Q 025522 101 VAFARHFGCVLCRKRADYLAAKK 123 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~ 123 (251)
|+.|+..||++|+...+.|.+..
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~ 25 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQAR 25 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTT
T ss_pred EEEEECCCCchHHHHHHHHHHHH
Confidence 56788999999998888776543
No 259
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=92.80 E-value=0.28 Score=36.00 Aligned_cols=54 Identities=13% Similarity=0.247 Sum_probs=32.4
Q ss_pred EEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH-HHHHHHHHHh-C---CceEEEcC
Q 025522 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-K---FKGVYADP 160 (251)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~-~~~~~f~~~~-~---~pfl~sDp 160 (251)
-|+.|...|||+|++-...|.+ .|+....|-.+.. +..+++.+.. + +|-++.|-
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~g 75 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKR-------KGVEFQEYCIDGDNEAREAMAARANGKRSLPQIFIDD 75 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH-------HTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEETT
T ss_pred CEEEEEcCCChhHHHHHHHHHH-------CCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEECC
Confidence 3455779999999998877765 3555555555443 3334454544 3 33366553
No 260
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.72 E-value=0.19 Score=44.60 Aligned_cols=42 Identities=5% Similarity=0.065 Sum_probs=35.0
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
.+.++++|...||+.|++.++.+.+...+++.. +.++.|.++
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 356677777899999999999999999988754 888888877
No 261
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.58 E-value=0.3 Score=37.51 Aligned_cols=49 Identities=8% Similarity=0.167 Sum_probs=29.4
Q ss_pred EccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC----HHHHHHHHHHhCCc---eEEEc
Q 025522 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK---GVYAD 159 (251)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~----~~~~~~f~~~~~~p---fl~sD 159 (251)
|...|||+|+...+.|.+. |+....|-.+. .+..+++.+.++.. .++.|
T Consensus 32 f~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i~ 87 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVN 87 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEET
T ss_pred EEcCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEEC
Confidence 6789999999877766553 45555555543 23333455666543 35554
No 262
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.55 E-value=0.078 Score=43.36 Aligned_cols=42 Identities=29% Similarity=0.403 Sum_probs=28.0
Q ss_pred CCcEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~ 139 (251)
.+++|+.|+ .+|||+|+...+.+ .++.+++.. +++++-+-..
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 356677666 89999999998876 344444332 5777666543
No 263
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=92.34 E-value=0.3 Score=36.12 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=16.2
Q ss_pred EEEEccCCChhhHHHHHHHHHc
Q 025522 101 VAFARHFGCVLCRKRADYLAAK 122 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~ 122 (251)
|++|...|||+|++-...|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 4446789999999877766543
No 264
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.08 E-value=0.29 Score=37.96 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=49.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC----CHHHHHHHHHHhCCce-EEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKG-VYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~ 172 (251)
|.+|-..+|+.|++-...|.+ .|+..-.+-.. +.+.++++.++.+.+. -+.+.....|+.+|+..
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 72 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNV 72 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCccc
Confidence 567788999999988777654 56665554443 3478889988888888 67788999999999753
No 265
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=92.05 E-value=0.24 Score=39.18 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=51.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC----CHHHHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----~~~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
+.+|-..+|+.|++....|. +.|+..-.|-.. +.+.++++..+.++|. -+.......|+.+|+...
T Consensus 4 itiY~~p~C~~crkak~~L~-------~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIR-------NSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccc
Confidence 45788999999998877764 466665555443 4578999999999998 666899999999998763
No 266
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=92.03 E-value=0.44 Score=32.98 Aligned_cols=46 Identities=13% Similarity=0.113 Sum_probs=27.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCH---HHHHHHHHHhCC
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF 153 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~---~~~~~f~~~~~~ 153 (251)
+++|...|||+|++-...|. +.|+..-.+..+.. ....++.+.++.
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~-------~~~i~~~~~~vd~~~~~~~~~el~~~~g~ 54 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFE-------ENNIAFDETIIDDYAQRSKFYDEMNQSGK 54 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEECCSHHHHHHHHHHHHTTTC
T ss_pred EEEEEcCCChhHHHHHHHHH-------HcCCCceEEEeecCCChhHHHHHHHHhCC
Confidence 66677899999998666554 44544333333322 234567666665
No 267
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=91.96 E-value=0.32 Score=47.24 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=27.8
Q ss_pred ccccCCCCCcEEec-CCCCeEeCCCccC--CCcEEEEE
Q 025522 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAF 103 (251)
Q Consensus 69 ~~~g~~ap~f~l~d-~~G~~v~ls~l~~--~~~vVLvF 103 (251)
...|..+|++.|.. .+|+++.+.+++. ++.+||+|
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~ 504 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAF 504 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEE
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEe
Confidence 46799999999875 5899999999885 35666665
No 268
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=91.66 E-value=0.098 Score=40.08 Aligned_cols=61 Identities=7% Similarity=-0.003 Sum_probs=40.7
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhC--Cce-EEEc
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK--FKG-VYAD 159 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~--~pf-l~sD 159 (251)
...|+++|++. |..|+...+.|.++..+++.+ +.++-|..+....+.++..-.. +|- ++.+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~ 86 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQE 86 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEEEEC
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEEEEe
Confidence 34567777888 889999999999988877533 7888888775433333222223 776 4444
No 269
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=91.61 E-value=0.41 Score=33.71 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=28.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHH----HHHHHHHhCC
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ----ARTFSEQTKF 153 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~----~~~f~~~~~~ 153 (251)
|.+|...|||+|++-...|.+.. ..+..+-|...+.+. ..++.+.++.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-----i~~~~~~v~~~~~~~~~~~~~~l~~~~g~ 65 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-----VDFEVIWIDKLEGEERKKVIEKVHSISGS 65 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-----CCCEEEEGGGCCHHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCChHHHHHHHHHHHcC-----CCcEEEEeeeCCccchHHHHHHHHHhcCC
Confidence 45567899999998776665531 224444444333322 3566666653
No 270
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=91.52 E-value=0.35 Score=37.28 Aligned_cols=54 Identities=19% Similarity=0.243 Sum_probs=29.4
Q ss_pred EEEEccCCChhhHHH-HHHHHHcHHHHHHcC---CEEEEEeCC--C--HHHHHHHHHHhCCc-e--EEEcCC
Q 025522 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPG--S--VEQARTFSEQTKFK-G--VYADPN 161 (251)
Q Consensus 101 LvF~R~~~Cp~C~~e-l~~L~~~~~~~~~~g---v~vVaVs~~--~--~~~~~~f~~~~~~p-f--l~sDp~ 161 (251)
|++|...|||+|++. ...|.+ .| +....|-.+ . .+..+++.+.++.+ . |+.|-+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~-------~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi~g~ 103 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQE-------LNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYINGK 103 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT-------SCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred EEEEECCCCCchHHHHHHHHHh-------cCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEECCE
Confidence 345567999999987 444443 34 444444443 2 12233455555543 3 666643
No 271
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=91.18 E-value=0.43 Score=37.71 Aligned_cols=49 Identities=8% Similarity=0.167 Sum_probs=28.7
Q ss_pred EccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC----HHHHHHHHHHhCCc---eEEEc
Q 025522 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK---GVYAD 159 (251)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~----~~~~~~f~~~~~~p---fl~sD 159 (251)
|...|||+|+...+.|.+. |+....|-.+. .+..+++.+.++.. -++.|
T Consensus 54 f~~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi~ 109 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVN 109 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEET
T ss_pred EECCCChhHHHHHHHHHHc-------CCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEEC
Confidence 6789999999877776553 44444444432 23333455666643 35554
No 272
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=90.96 E-value=0.55 Score=36.79 Aligned_cols=55 Identities=11% Similarity=0.248 Sum_probs=33.6
Q ss_pred EEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHHHHhCCc---eEEEcCC
Q 025522 100 VVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK---GVYADPN 161 (251)
Q Consensus 100 VLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~~~~~~p---fl~sDp~ 161 (251)
|++|.++ .|||+|++-...|.+ .|+....|-.+ +++..+++.+..+.+ -|+.|-+
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI~G~ 99 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGE 99 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred EEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECCCCHHHHHHHHHHHCCCCcCEEEECCE
Confidence 5667776 899999987776654 46665555554 344444454444443 3777744
No 273
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.84 E-value=0.4 Score=34.99 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=17.3
Q ss_pred EEEEccCCChhhHHHHHHHHHc
Q 025522 101 VAFARHFGCVLCRKRADYLAAK 122 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~ 122 (251)
+++|...|||+|++-...|.+.
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHc
Confidence 4557799999999988777653
No 274
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=90.77 E-value=0.061 Score=44.77 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=27.5
Q ss_pred cEEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEeCC
Q 025522 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs~~ 139 (251)
+++|+-|..+|||+|+...+.| .++.+++. .++.+.-+-.+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 3455555579999999998887 66555553 35666655543
No 275
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=90.72 E-value=0.82 Score=42.93 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=28.1
Q ss_pred CCCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEE
Q 025522 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVA 102 (251)
Q Consensus 66 ~~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLv 102 (251)
.++...|..+|+.-|. .+|+.+++-|++..+.+||.
T Consensus 417 ~~~~~pG~r~p~~~l~-~~~~~~~~~dl~g~~f~ll~ 452 (535)
T 3ihg_A 417 TPSGRPGFRGPHVLVS-RHGERLSTVDLFGDGWTLLA 452 (535)
T ss_dssp SCCCCTTSBCCCCEEE-ETTEEEEGGGGCSSSEEEEE
T ss_pred CCCCCCCCcCCCceee-cCCceeeHHHhcCCceEEEe
Confidence 3456789999999985 36888999999877766655
No 276
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=90.68 E-value=1.1 Score=31.47 Aligned_cols=47 Identities=11% Similarity=0.043 Sum_probs=29.6
Q ss_pred EEEEccC----CChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC------CHHHHHHHHHHhCCc
Q 025522 101 VAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVEQARTFSEQTKFK 154 (251)
Q Consensus 101 LvF~R~~----~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~------~~~~~~~f~~~~~~p 154 (251)
|++|... |||+|++-...|. +.|+..-.|..+ +.+..+++.+..+..
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~-------~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLT-------VKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHH-------HTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred EEEEEeCCCCCcCccHHHHHHHHH-------HcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 3445678 9999987766554 456666566555 345555666666554
No 277
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.83 E-value=1 Score=33.53 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=28.8
Q ss_pred EccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC---CHHHHHH-HHHHhCCc---eEEEcC
Q 025522 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---SVEQART-FSEQTKFK---GVYADP 160 (251)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~---~~~~~~~-f~~~~~~p---fl~sDp 160 (251)
|...|||+|++-..-|.+ .|+..-.|-.+ +....++ +.+..+.+ .++.|-
T Consensus 22 y~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g 78 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFSS-------LGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNK 78 (114)
T ss_dssp EECTTCHHHHHHHHHHHH-------TTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETT
T ss_pred EEcCCCCcHHHHHHHHHH-------cCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECC
Confidence 667999999877766655 35544444444 3334434 33445433 366664
No 278
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=89.64 E-value=0.088 Score=46.87 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=21.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHH
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVM 126 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~ 126 (251)
++.|.+.|||+|++..+.+.+..+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 45667999999999999998876554
No 279
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=89.01 E-value=0.77 Score=33.48 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=28.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH-HHHHH
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR-TFSEQ 150 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~-~f~~~ 150 (251)
|+.|-..|||+|.+--..| ++.|+...-|-.+.....+ .+.+.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L-------~~~gi~y~~idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTAL-------TANRIAYDEVDIEHNRAAAEFVGSV 49 (92)
T ss_dssp EEEEECTTCSSHHHHHHHH-------HHTTCCCEEEETTTCHHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHH-------HhcCCceEEEEcCCCHHHHHHHHHH
Confidence 4556789999999865544 5577777777776544444 44443
No 280
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=88.63 E-value=1.2 Score=33.89 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=31.9
Q ss_pred EEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCE-EEEEeCCCHHHHH-HHHHHhCCc-e--EEEcCC
Q 025522 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR-TFSEQTKFK-G--VYADPN 161 (251)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~-vVaVs~~~~~~~~-~f~~~~~~p-f--l~sDp~ 161 (251)
.|++|-.. .|||+|.+-..-|.+ .|+. ...|-.+..+.++ .+.+..+.+ + |+.|-+
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g~ 85 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECCE
Confidence 36677776 499999987766654 4552 4444444333333 333433433 3 787754
No 281
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=88.49 E-value=1.5 Score=33.38 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=32.9
Q ss_pred EEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCE---EEEEeCCCHHHHH-HHHHHhCCc-e--EEEcCC
Q 025522 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSVEQAR-TFSEQTKFK-G--VYADPN 161 (251)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~---vVaVs~~~~~~~~-~f~~~~~~p-f--l~sDp~ 161 (251)
-|++|-.. .|||+|+.-..-|.+ .|+. ...+-.+....++ .+.+..+.+ + |+.|-+
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g~ 83 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNKE 83 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECCE
Confidence 36777777 499999988777655 3554 4444444333333 344444433 3 887753
No 282
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.14 E-value=1.4 Score=32.85 Aligned_cols=49 Identities=6% Similarity=-0.002 Sum_probs=27.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHH-HHHHH
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR-TFSEQ 150 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~-~f~~~ 150 (251)
|++|-..+||+|... ..-++....|++.|+....|-.+.....+ ++.+.
T Consensus 10 V~vy~~~~C~~C~~~-~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAIK-KKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHHH-HHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCcccc-hhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 444557999999930 00111223355678888777776543444 44444
No 283
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=87.60 E-value=0.67 Score=39.28 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=29.9
Q ss_pred CCcEEEEEEccCC--ChhhHHHHHHHHHcHHHHHH-cC---CEEEEEeCCCH
Q 025522 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSV 141 (251)
Q Consensus 96 ~~~vVLvF~R~~~--Cp~C~~el~~L~~~~~~~~~-~g---v~vVaVs~~~~ 141 (251)
++|++|.|| ..| |+.|++..+-+.++...... .| +.++.|..+..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~ 75 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD 75 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC
Confidence 367777766 677 99999988777777655321 22 66666666544
No 284
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=87.52 E-value=0.66 Score=36.67 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=27.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEE
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaV 136 (251)
++.++.|+.|--++||+|++..+.|.++ .+++|+.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 3567778888899999999999988764 24666644
No 285
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=87.09 E-value=1.3 Score=32.82 Aligned_cols=56 Identities=16% Similarity=0.166 Sum_probs=32.4
Q ss_pred EEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHHHHhC---CceEEEcCC
Q 025522 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTK---FKGVYADPN 161 (251)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~~~~~---~pfl~sDp~ 161 (251)
.|++|... .|||+|++-..-|.+ .|+..-.|-.+ +.+..+.+.+..+ +|-|+.|-+
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g~ 82 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGGE 82 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEETTE
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEECCE
Confidence 35667776 499999998777755 45554455443 3333333444434 333777643
No 286
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=86.75 E-value=0.65 Score=34.96 Aligned_cols=64 Identities=13% Similarity=0.163 Sum_probs=46.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC----CHHHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~----~~~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
|.+|-..+|+.|++....|.+ .|+..-.|-.. +.+.+++|.++.++. -+.+.....|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~g~~-~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEHGWQ-TVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHHCHH-HHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhCChH-HhccCCcHhHHhcCccc
Confidence 456778999999988777654 56665555432 347889999888742 44468889999998754
No 287
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=86.29 E-value=0.36 Score=39.27 Aligned_cols=29 Identities=17% Similarity=0.353 Sum_probs=22.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHH
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVM 126 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~ 126 (251)
+++|+-|| .+|||+|+..-+.|.+..+++
T Consensus 23 ~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 23 MAPVTEVF-ALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCSEEEEE-CTTCHHHHHHGGGHHHHHHHH
T ss_pred CCEEEEEE-CCCChhHHHhhHHHHHHHHHh
Confidence 45555555 799999999999888887776
No 288
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=85.81 E-value=1.4 Score=33.36 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=46.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
|.+|-..+|+.|++-...|.+ .|+..-.+-. .+.+.++++.++.++. -+.+.....|+.+|+..
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~~-~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPWE-QLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCGG-GTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcChH-hhccCCchhhHhcCchh
Confidence 567778999999988877755 4655444433 3457888898887743 44578889999998754
No 289
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=85.68 E-value=0.37 Score=41.42 Aligned_cols=42 Identities=10% Similarity=-0.004 Sum_probs=29.9
Q ss_pred CCCcEEEEEEcc--CCChhhHHHHHHHHHcHHHHHH-cCCEEEEEeCCC
Q 025522 95 KDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS 140 (251)
Q Consensus 95 ~~~~vVLvF~R~--~~Cp~C~~el~~L~~~~~~~~~-~gv~vVaVs~~~ 140 (251)
...+.+||.|.+ .||+ ..+.+.++..++.. .++.++.|.+++
T Consensus 20 ~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~ 64 (240)
T 2qc7_A 20 PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISD 64 (240)
T ss_dssp GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCC
T ss_pred cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCc
Confidence 345567777778 9999 66777777777754 468888888653
No 290
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=84.75 E-value=2.3 Score=30.20 Aligned_cols=54 Identities=4% Similarity=-0.062 Sum_probs=30.9
Q ss_pred EEEccCCChhhH-----HHHHHHHHcHHHHHHcCCEEEEEeCCCH-HHHHHHHHHhCC---ce--EEEcCC
Q 025522 102 AFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKF---KG--VYADPN 161 (251)
Q Consensus 102 vF~R~~~Cp~C~-----~el~~L~~~~~~~~~~gv~vVaVs~~~~-~~~~~f~~~~~~---pf--l~sDp~ 161 (251)
+.|-..+||+|. ..+.++ |++.|+....|-.+.. +..+++.+..+. ++ |+.|-+
T Consensus 5 ~ly~~~~C~~c~~~~~~~~ak~~------L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~g~ 69 (93)
T 1t1v_A 5 RVYSTSVTGSREIKSQQSEVTRI------LDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNH 69 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHH------HHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTE
T ss_pred EEEEcCCCCCchhhHHHHHHHHH------HHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEECCE
Confidence 345579999994 333332 4567777666666543 333445555553 23 776643
No 291
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=84.71 E-value=0.89 Score=37.15 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=25.2
Q ss_pred EEEEEEccCCChhhHHHHHHH---HHcHHHHHHcCCEEEEEe
Q 025522 99 AVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (251)
Q Consensus 99 vVLvF~R~~~Cp~C~~el~~L---~~~~~~~~~~gv~vVaVs 137 (251)
+.|+-|-.++||+|...-+.| .++.+++.+ +++++-+-
T Consensus 23 ~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 23 PQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 344555599999999988876 355555432 46666555
No 292
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=83.97 E-value=1.9 Score=32.11 Aligned_cols=60 Identities=8% Similarity=0.129 Sum_probs=33.7
Q ss_pred cCCCcEEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHHHHhCCc-e--EEEcCC
Q 025522 94 WKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-G--VYADPN 161 (251)
Q Consensus 94 ~~~~~vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~~~~~~p-f--l~sDp~ 161 (251)
.+..+ |++|..+ .|||+|++-..-|.+ .|+....+-.+ +++..+.+.+..+.+ + |+.|-+
T Consensus 13 i~~~~-Vvlf~kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g~ 80 (111)
T 3zyw_A 13 THAAP-CMLFMKGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGE 80 (111)
T ss_dssp HTSSS-EEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred HhcCC-EEEEEecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEECCE
Confidence 33444 5566653 899999998777754 45554444443 333333344443433 3 777743
No 293
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=83.76 E-value=2.5 Score=36.37 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=30.9
Q ss_pred CCCcEEEEEEc--cCCChhhHHHHHHHHHcHHHHHH--cCCEEEEEeCCC
Q 025522 95 KDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS 140 (251)
Q Consensus 95 ~~~~vVLvF~R--~~~Cp~C~~el~~L~~~~~~~~~--~gv~vVaVs~~~ 140 (251)
...+.|||.|+ +.||+ ..+.+.++..++.. ..+.++-|.++.
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 34456677777 99998 67777777777754 468888888776
No 294
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=81.53 E-value=1.2 Score=36.26 Aligned_cols=43 Identities=9% Similarity=-0.066 Sum_probs=31.8
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
.+.|+.|+.|--+.||+|.+..+.+.+...+...-.++++.--
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 3678988888899999999998888776555422346766543
No 295
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=78.96 E-value=3.3 Score=32.80 Aligned_cols=39 Identities=15% Similarity=0.302 Sum_probs=26.3
Q ss_pred cEEEEEEccCCChhhHHHHHHH-HHcHHHHHHcCCEEEEEeC
Q 025522 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIGP 138 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L-~~~~~~~~~~gv~vVaVs~ 138 (251)
++++.|| .+.||+|....+.| .++.+++. ..+++..+..
T Consensus 19 ~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 3455554 69999999988888 66665543 2466666653
No 296
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=77.69 E-value=3.2 Score=32.99 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=29.7
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHH-HcHHHHHH-cCCEEEEEe
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIG 137 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~-~~~~~~~~-~gv~vVaVs 137 (251)
+.++.|+.|--+-||+|....+.+. .+..++.+ -+++++...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4577788888999999999988884 45455543 347776643
No 297
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.60 E-value=7.9 Score=31.44 Aligned_cols=68 Identities=10% Similarity=-0.002 Sum_probs=46.4
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHc--HHHHHHcCCEEEEEeCCCHHHHH---------------HHH---HHhCCc
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAK--KDVMDASGVALVLIGPGSVEQAR---------------TFS---EQTKFK 154 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~--~~~~~~~gv~vVaVs~~~~~~~~---------------~f~---~~~~~p 154 (251)
+++|.|+|++-+.||+.|+....++-.. ..++-+.+.-+++....+.+..+ ... .-.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 3578999999999999999988665332 23333457778888888776322 111 224799
Q ss_pred e-EEEcCCh
Q 025522 155 G-VYADPNH 162 (251)
Q Consensus 155 f-l~sDp~~ 162 (251)
+ ++.++.+
T Consensus 133 ~l~ii~~~~ 141 (178)
T 2ec4_A 133 LFLIIMGKR 141 (178)
T ss_dssp EEEEECCCS
T ss_pred eEEEEEcCC
Confidence 9 8888774
No 298
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=76.36 E-value=4.2 Score=31.70 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=26.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEE
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaV 136 (251)
..++|+-|+ -+.||+|...-+.+.++..++.. ++.++.+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 356677766 69999999988877776665533 3555544
No 299
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=74.90 E-value=3.6 Score=36.10 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=28.8
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~ 139 (251)
++.+|+.|--.-||+|++..++|.+... +-.++++.+..-
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pil 186 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGWL 186 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCCS
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeecc
Confidence 4556666669999999999999987554 355666665543
No 300
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=72.30 E-value=11 Score=28.74 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=31.6
Q ss_pred EEEEEEcc----CCChhhHHHHHHHHHcHHHHHHcCCE-EEEEeCCCHHHHHH-HHHHhCCc-e--EEEcCC
Q 025522 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQART-FSEQTKFK-G--VYADPN 161 (251)
Q Consensus 99 vVLvF~R~----~~Cp~C~~el~~L~~~~~~~~~~gv~-vVaVs~~~~~~~~~-f~~~~~~p-f--l~sDp~ 161 (251)
.||+|.-+ ..||+|.+-..-|. +.|+. ...|-.++...+++ ..+..+++ + ||.+-+
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~ 85 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECCE
Confidence 36777766 48999998776664 34542 33333333233443 33445544 4 888754
No 301
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=70.21 E-value=5.8 Score=32.89 Aligned_cols=21 Identities=24% Similarity=0.551 Sum_probs=15.7
Q ss_pred EEEEccCCChhhHHHHHHHHH
Q 025522 101 VAFARHFGCVLCRKRADYLAA 121 (251)
Q Consensus 101 LvF~R~~~Cp~C~~el~~L~~ 121 (251)
+.+|...|||+|++-...|.+
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 555667899999987666654
No 302
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=66.92 E-value=4.3 Score=31.17 Aligned_cols=63 Identities=8% Similarity=0.121 Sum_probs=34.7
Q ss_pred CCCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHHHH-hCCc-e--EEEcCC
Q 025522 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQ-TKFK-G--VYADPN 161 (251)
Q Consensus 95 ~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~~~-~~~p-f--l~sDp~ 161 (251)
+..+ |++| -..|||+|++--.-|.+.+. + .....++-|..+ +.+..+++..+ .+.+ + |+.|-+
T Consensus 12 ~~~~-Vvvy-sk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G~ 79 (127)
T 3l4n_A 12 DLSP-IIIF-SKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNGV 79 (127)
T ss_dssp TSCS-EEEE-ECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred ccCC-EEEE-EcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECCE
Confidence 3444 4444 46999999988777766310 0 112455555554 33456665543 3433 3 887743
No 303
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=66.62 E-value=7.4 Score=31.77 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=28.9
Q ss_pred CCcEEEEEEccCCChhhHHHHHHHHH-cHHHHHH-cCCEEEEEeC
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYLAA-KKDVMDA-SGVALVLIGP 138 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L~~-~~~~~~~-~gv~vVaVs~ 138 (251)
+.|+.|+.|--+.||+|...-+.+.. +.+++-+ -.++++..-.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 56887788889999999987776633 3444432 3467666543
No 304
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=66.38 E-value=18 Score=27.60 Aligned_cols=46 Identities=9% Similarity=-0.003 Sum_probs=30.5
Q ss_pred EEEEEccCCChhhH-----HHHHHHHHcHHHHHHcCCEEEEEeCC-CHHHHHHHHHHh
Q 025522 100 VVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT 151 (251)
Q Consensus 100 VLvF~R~~~Cp~C~-----~el~~L~~~~~~~~~~gv~vVaVs~~-~~~~~~~f~~~~ 151 (251)
||..|-...||+|. ..+..| |++.||..--|-.+ +.+.-+++.++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~l------L~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGF------LEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHH------HHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccchHHHHHHHHH------HHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 35566699999995 444433 77888887777776 444445566665
No 305
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=65.79 E-value=8.7 Score=31.65 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=32.9
Q ss_pred EeCCCccCCCcEEEEEEccCCChhhHHHHHHHHHcHH-HHH-HcCCEEEEEe
Q 025522 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VMD-ASGVALVLIG 137 (251)
Q Consensus 88 v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~~~~~-~~~-~~gv~vVaVs 137 (251)
..+++- +.|+.|+.|--+-||+|++..+.+..... ++- .-.++++..-
T Consensus 8 ~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 8 HLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred ceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 345553 67888888889999999999887766443 553 3346666444
No 306
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=65.00 E-value=24 Score=25.36 Aligned_cols=30 Identities=13% Similarity=0.078 Sum_probs=20.0
Q ss_pred cceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHh
Q 025522 214 QGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKAC 249 (251)
Q Consensus 214 ~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al 249 (251)
.|..++++++ |++.+.+.+ ..+.+++.+.+
T Consensus 83 ~Pt~~~~~~~-G~~~~~~~G-----~~~~~~l~~~l 112 (126)
T 2l57_A 83 VPTTVFLDKE-GNKFYVHQG-----LMRKNNIETIL 112 (126)
T ss_dssp SSEEEEECTT-CCEEEEEES-----CCCHHHHHHHH
T ss_pred eeEEEEECCC-CCEEEEecC-----CCCHHHHHHHH
Confidence 5678999987 689888775 23445555444
No 307
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=64.31 E-value=9.5 Score=31.90 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=29.2
Q ss_pred CCcEEEEEEccCCChhhHHHHHHH-HHcHHHHHH-cCCEEEEEe
Q 025522 96 DRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDA-SGVALVLIG 137 (251)
Q Consensus 96 ~~~vVLvF~R~~~Cp~C~~el~~L-~~~~~~~~~-~gv~vVaVs 137 (251)
+.|+.|+.|--+.||+|+..-+.+ .++.+++-+ -.++++..-
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 568877777799999999988765 445555533 346666544
No 308
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=60.96 E-value=30 Score=27.59 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=25.7
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
++.|.+|--+.||+|....+.+.++.. +...+++|..+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 445667778999999966555555544 434467776654
No 309
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=56.75 E-value=29 Score=28.34 Aligned_cols=43 Identities=5% Similarity=0.106 Sum_probs=33.6
Q ss_pred CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCC
Q 025522 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 97 ~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
.+.++++|-..||..|.+.+..+.+...+++.. +..+.|..+.
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~ 173 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM 173 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc
Confidence 366777776789999999999999988887654 7777777764
No 310
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=54.68 E-value=23 Score=25.59 Aligned_cols=51 Identities=6% Similarity=0.067 Sum_probs=39.0
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~~----~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...+++..+.+|.+..|.++ .+..+++++++|+ .|.+...++-++.|....
T Consensus 24 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 79 (99)
T 3j21_Z 24 IRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFV 79 (99)
T ss_dssp HHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCSTTC
T ss_pred HHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCCCC
Confidence 44556667899999998664 5556778899998 887888888888887653
No 311
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=54.26 E-value=34 Score=23.91 Aligned_cols=51 Identities=10% Similarity=0.100 Sum_probs=38.0
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCceEEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGVYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~~ 173 (251)
...+++..+++|.|..|-. ..+..+++++++|+++.+...++-++.|....
T Consensus 20 ~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~eLG~a~Gk~~~ 74 (82)
T 3v7e_A 20 VKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVG 74 (82)
T ss_dssp HHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHHHHTCSSC
T ss_pred HHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCCC
Confidence 4455666789999998854 35666788999999556677888888887664
No 312
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=53.24 E-value=48 Score=31.26 Aligned_cols=47 Identities=15% Similarity=0.033 Sum_probs=38.3
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN 161 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~ 161 (251)
--+..|.++..+|++.|+.++++.-+..+. .++++++++.-|+.|-+
T Consensus 92 FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~V~~d~e 138 (506)
T 3umv_A 92 FLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGASTLVADFS 138 (506)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCEEEeccC
Confidence 455678888999999999999987666677 99999988877777754
No 313
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=53.02 E-value=30 Score=25.07 Aligned_cols=51 Identities=6% Similarity=0.064 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~~----~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...+++..+++|.+..|.++ .+..+++++++|+ .|.+...++-++.|....
T Consensus 25 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~~~ 80 (101)
T 1w41_A 25 IQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHT 80 (101)
T ss_dssp HHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCCCc
Confidence 44556667899999998664 5556788889998 776888889999987643
No 314
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=52.26 E-value=17 Score=27.64 Aligned_cols=39 Identities=3% Similarity=0.032 Sum_probs=30.1
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.+|.++...+++.|+.+|+|...+.+..++.+...+++.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 356777777888899999998877666777777878774
No 315
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=48.75 E-value=66 Score=23.80 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=37.1
Q ss_pred HHHHHcHHHH-HHcCCEEEEEeCCCH---HHHHHHHHHhCCce--EEEcCChhHHHHc
Q 025522 117 DYLAAKKDVM-DASGVALVLIGPGSV---EQARTFSEQTKFKG--VYADPNHSSYEAL 168 (251)
Q Consensus 117 ~~L~~~~~~~-~~~gv~vVaVs~~~~---~~~~~f~~~~~~pf--l~sDp~~~ly~al 168 (251)
++|.+..+++ ++-++.+++|..++. +.+-.|.+..+... +++|.+..-.+.|
T Consensus 36 qelkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydqdqnrleef 93 (134)
T 2l69_A 36 QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEF 93 (134)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHH
Confidence 4555555555 455888999988887 46667889998886 8889887654444
No 316
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=47.68 E-value=13 Score=33.70 Aligned_cols=38 Identities=13% Similarity=0.315 Sum_probs=33.2
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
+...++...+++.|++|+.||-+..+.++.++++.++.
T Consensus 224 p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 224 DEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 66677788889999999999999999999999987653
No 317
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=47.21 E-value=69 Score=29.64 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=45.0
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC---------hhHHHHcCCcc
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN---------HSSYEALSFVS 172 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~---------~~ly~alGl~~ 172 (251)
-.+..|.++.++|++.|..|+.+..+..+.+.++++++++.-|+.+.+ .++.+++|+..
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~~~~~~v~~~lgi~~ 156 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPF 156 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCEEEEecccchhHHHHHHHHHHHcCCEE
Confidence 346678888999999999999987666689999999998876555533 34456677754
No 318
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=46.47 E-value=65 Score=27.97 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=27.3
Q ss_pred cEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 98 ~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
++.|..|-..+||+|..--..|.+...+ .|+..+.+-
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~ 79 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYH 79 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEE
Confidence 3788889999999999888887776543 466444554
No 319
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=44.61 E-value=66 Score=24.51 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=37.5
Q ss_pred HHHHHHcCCEEEEEeCCC-H----HHHHHHHHHhCCceEEEcCChhHHHHcCC
Q 025522 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGVYADPNHSSYEALSF 170 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~-~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl 170 (251)
...++...+++|.|..|- + ..+..+++++++|+++.+...++-++.|.
T Consensus 33 ~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG~a~G~ 85 (126)
T 2xzm_U 33 LRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLGEYLGH 85 (126)
T ss_dssp HHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHHHHHTC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHHHHHCC
Confidence 344566678899998764 3 46788999999999667788888888887
No 320
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=44.22 E-value=16 Score=32.46 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=32.7
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHH----hCCc
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQ----TKFK 154 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~----~~~p 154 (251)
++..++...+++.|++|++||-+..+.++.|+++ +++|
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp 187 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK 187 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC
Confidence 4566778888999999999999999999999987 5665
No 321
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=43.48 E-value=46 Score=26.59 Aligned_cols=37 Identities=8% Similarity=0.142 Sum_probs=28.2
Q ss_pred EEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEe
Q 025522 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (251)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs 137 (251)
-|.+|--+.||+|..-.+.|.++..++. .+++|.-..
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 4567778999999999998988877763 357766554
No 322
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=42.02 E-value=98 Score=24.61 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=26.3
Q ss_pred cceEEEEcCCCCeEEEEEe---CCCCCCCCCHHHHHHHhh
Q 025522 214 QGGIIVAGPGKSNISYIHR---DKEAGDDPDIQDILKACC 250 (251)
Q Consensus 214 ~gg~fVid~ggg~I~~~h~---~~~~~D~~~~~eIL~al~ 250 (251)
.|..++++++ |+++|..- .....+.+...++|+.+.
T Consensus 105 ~Pt~v~l~~d-G~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 105 WPLNIIMTPG-KKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp SSEEEEECTT-SCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred CcceeeECCC-CCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 5679999998 69998732 223456788999988764
No 323
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=40.61 E-value=51 Score=26.00 Aligned_cols=39 Identities=8% Similarity=-0.123 Sum_probs=31.1
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+...+...++++.|+.+++|+.+....++.+.+..++..
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~ 133 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH 133 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE
Confidence 344455666778899999999998888999999988864
No 324
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=40.48 E-value=46 Score=30.40 Aligned_cols=59 Identities=24% Similarity=0.148 Sum_probs=44.6
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC---------hhHHHHcCCcc
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN---------HSSYEALSFVS 172 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~---------~~ly~alGl~~ 172 (251)
-.+..|.++..+|++.|..++.+..+..+.+.++++++++.-|++|.+ ..+.+.+|+..
T Consensus 49 fl~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~rd~~v~~~l~i~~ 116 (420)
T 2j07_A 49 WFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKAVYALTSHTPYGRYRDGRVREALPVPL 116 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEecccChhHHHHHHHHHHHcCCeE
Confidence 346678888999999999999988666789999999998877666433 34555566643
No 325
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=39.95 E-value=68 Score=23.07 Aligned_cols=49 Identities=8% Similarity=-0.000 Sum_probs=37.8
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCceEEEcCChhHHHHcCCc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGVYADPNHSSYEALSFV 171 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~ 171 (251)
...++...+.+|.+..|-. ..+..+++++++|+++.+...++-++.|..
T Consensus 27 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~eLG~a~Gk~ 79 (101)
T 3on1_A 27 VKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQMLGRAIGKH 79 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHHHTTSS
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHHHHHHhCCc
Confidence 4455566789999998854 355567888999996668888999999986
No 326
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=38.94 E-value=60 Score=30.76 Aligned_cols=46 Identities=7% Similarity=-0.024 Sum_probs=37.9
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEc
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYAD 159 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sD 159 (251)
-.+..|.++..+|++.|..++.+..+..+.+.++++++++.-|+.+
T Consensus 86 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 131 (543)
T 2wq7_A 86 FLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFE 131 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEe
Confidence 3467788889999999999999887667889999999887666655
No 327
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=38.37 E-value=66 Score=29.16 Aligned_cols=18 Identities=6% Similarity=0.095 Sum_probs=12.9
Q ss_pred EEEEEccCCChhhHHHHHH
Q 025522 100 VVAFARHFGCVLCRKRADY 118 (251)
Q Consensus 100 VLvF~R~~~Cp~C~~el~~ 118 (251)
|++|. ..|||+|++-...
T Consensus 263 VvVYs-k~~CPyC~~Ak~~ 280 (362)
T 2jad_A 263 IFVAS-KTYCPYSHAALNT 280 (362)
T ss_dssp EEEEE-CTTCHHHHHHHHH
T ss_pred EEEEE-cCCCcchHHHHHH
Confidence 44444 5899999987653
No 328
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=37.01 E-value=48 Score=24.22 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...++.-.+.+|.+..|-+ ..+..+++++++|+ .|.+...++-++.|....
T Consensus 31 ~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~~ 86 (105)
T 3u5e_c 31 VKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFR 86 (105)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCccc
Confidence 4455556688999998854 35677888899999 588888899999987653
No 329
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=36.99 E-value=64 Score=24.83 Aligned_cols=51 Identities=6% Similarity=0.055 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHhCCceEEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGVYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~-----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~~ 173 (251)
...++...+++|.|..|-. ..+..+++++++|+++.+...++-++.|....
T Consensus 41 ~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~G~~~~ 96 (134)
T 2ale_A 41 TKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRP 96 (134)
T ss_dssp HHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHHHHTTCSSC
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHhCCCCC
Confidence 3445566788999998633 35778899999999556888899999998765
No 330
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=35.77 E-value=59 Score=23.92 Aligned_cols=51 Identities=4% Similarity=-0.086 Sum_probs=38.6
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~~----~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...++...+.+|.|..|-++ .+..+++++++|+ .+.+...++-++.|....
T Consensus 30 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~~~ 85 (110)
T 3cpq_A 30 IKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFP 85 (110)
T ss_dssp HHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCccc
Confidence 34455566889999988653 5566788889998 676788899999998643
No 331
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=35.64 E-value=42 Score=22.83 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=23.4
Q ss_pred EEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 133 LVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 133 vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
=|.|.++.....+++.++.+++| |+.+
T Consensus 50 dI~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 50 VILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 36899999999999999999999 7654
No 332
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=35.60 E-value=63 Score=23.49 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=39.2
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...++...+.+|.+..|-. ..+..+++++++|+ .|.+...++-++.|....
T Consensus 31 ~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 86 (104)
T 4a18_G 31 IKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHR 86 (104)
T ss_dssp HHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCccC
Confidence 4455666789999998854 35666788889998 578888899999987653
No 333
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=35.32 E-value=40 Score=26.23 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=30.0
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCC---------------CHHHHHHHHHHhCCce
Q 025522 117 DYLAAKKDVMDASGVALVLIGPG---------------SVEQARTFSEQTKFKG 155 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~---------------~~~~~~~f~~~~~~pf 155 (251)
+...+...++++.|+.+++++.. ..+.++...+..++.|
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f 98 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF 98 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred ccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe
Confidence 34455566677889999999987 3567778888889888
No 334
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=34.78 E-value=55 Score=30.43 Aligned_cols=47 Identities=15% Similarity=0.221 Sum_probs=38.4
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC
Q 025522 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN 161 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~ 161 (251)
.+..|.++..+|++.|..++.+..+..+.+.++++++++.-|+.+.+
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~ 101 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQD 101 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEecc
Confidence 46678888999999999999988666789999999998877666433
No 335
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=34.33 E-value=61 Score=24.25 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=29.7
Q ss_pred HHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 120 ~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
.+...++++.|+.++.++..+...++.+.++.++..
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 77 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE 77 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh
Confidence 355666778899999999998888999999988764
No 336
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=32.76 E-value=56 Score=30.40 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=38.4
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcC
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADP 160 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp 160 (251)
-.+..|.++..+|++.|..++.+..+..+.+.++++++++.-|+++.
T Consensus 62 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~ 108 (489)
T 1np7_A 62 FLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHR 108 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCCEEEEec
Confidence 45677888899999999999998766668899999998876666663
No 337
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=32.28 E-value=22 Score=26.74 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.6
Q ss_pred CCChhhHHHHHHHHHcHHHHHHc
Q 025522 107 FGCVLCRKRADYLAAKKDVMDAS 129 (251)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~~~~~ 129 (251)
..|+-|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 48999999999999988877644
No 338
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=31.70 E-value=1.1e+02 Score=24.15 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=16.2
Q ss_pred HHHcHHHHHHcCCEEEEEeCCC
Q 025522 119 LAAKKDVMDASGVALVLIGPGS 140 (251)
Q Consensus 119 L~~~~~~~~~~gv~vVaVs~~~ 140 (251)
+.+....+++.|+.|.+|+.++
T Consensus 128 ~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCCEEEEEEecC
Confidence 3445556678899999888875
No 339
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=31.51 E-value=44 Score=27.02 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=33.9
Q ss_pred HHcCCEEEEEeCCCH-----------HHHHHHHHHhCCceEEEcCChhHHHHcCC
Q 025522 127 DASGVALVLIGPGSV-----------EQARTFSEQTKFKGVYADPNHSSYEALSF 170 (251)
Q Consensus 127 ~~~gv~vVaVs~~~~-----------~~~~~f~~~~~~pfl~sDp~~~ly~alGl 170 (251)
+...+.++++..|-. ..+..|++++++|+++.|...++-++.|+
T Consensus 50 ~k~~a~lcvLA~D~d~~~~i~~hi~~~li~alC~E~~Ip~i~V~s~k~LG~a~Gi 104 (165)
T 2kg4_A 50 DPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLL 104 (165)
T ss_dssp CTTTEEEEEEECCTGGGGCHHHHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCCCccchhhhhccHHHHHHHHHHcCCCEEEECCHHHHHHHHCC
Confidence 334577777777642 13569999999999999999999988887
No 340
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=30.99 E-value=1.2e+02 Score=21.83 Aligned_cols=50 Identities=8% Similarity=-0.005 Sum_probs=37.2
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
...++...+.+|.|..|-. ..+..+++++++|+++.....++-.++|...
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~eLG~A~Gk~~ 81 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAVLGRSIGKEA 81 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHHHHHHTTSSC
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHHHHhhhCccc
Confidence 3445566789999998854 3556678899999944477788999999874
No 341
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=30.61 E-value=65 Score=30.36 Aligned_cols=46 Identities=13% Similarity=0.161 Sum_probs=38.4
Q ss_pred HHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEc
Q 025522 114 KRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYAD 159 (251)
Q Consensus 114 ~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sD 159 (251)
-.+..|.++..+|++.|..|+.+..+..+.+.++++++++.-|+.+
T Consensus 97 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~ 142 (525)
T 2j4d_A 97 FLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAH 142 (525)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCCEEEEe
Confidence 3467788889999999999999887767899999999998776665
No 342
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=30.48 E-value=70 Score=25.43 Aligned_cols=39 Identities=18% Similarity=0.074 Sum_probs=30.5
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCC---------------HHHHHHHHHHhCCce
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFKG 155 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~---------------~~~~~~f~~~~~~pf 155 (251)
+...+...+++++|+.+++++..+ .+.++...++.++.|
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f 106 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL 106 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce
Confidence 445555677788999999999988 467778888888876
No 343
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=30.29 E-value=1.1e+02 Score=22.74 Aligned_cols=50 Identities=10% Similarity=0.051 Sum_probs=37.3
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~-----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
...++...+++|.|..|-. ..+..+++++++|+++.+...++-++.|...
T Consensus 29 ~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~g~k~ 83 (121)
T 2lbw_A 29 VKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKR 83 (121)
T ss_dssp HHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHHHHTCSS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHHHhCCCC
Confidence 3445666788999998732 3577889999999966677778888888654
No 344
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=30.02 E-value=1.4e+02 Score=22.77 Aligned_cols=51 Identities=12% Similarity=0.086 Sum_probs=37.9
Q ss_pred HHHHHcCCEEEEEeCCCH-----HHHHHHHHHhCCceEEEcCChhHHHHcCCcccc
Q 025522 124 DVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGVYADPNHSSYEALSFVSGV 174 (251)
Q Consensus 124 ~~~~~~gv~vVaVs~~~~-----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~~~ 174 (251)
..+++..+.+|.|..|-. ..+..+++++++|+++.+...++-++.|.....
T Consensus 51 kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~eLG~a~G~~~~v 106 (135)
T 2aif_A 51 KALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVALGRACGVSRPV 106 (135)
T ss_dssp HHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHHHHHHTTCSSCC
T ss_pred HHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHHHHHHhCCCCcE
Confidence 344555688899888732 356678889999996667888999999987654
No 345
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=29.88 E-value=79 Score=23.53 Aligned_cols=51 Identities=12% Similarity=0.047 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHhCCce-EEEcCChhHHHHcCCccc
Q 025522 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKG-VYADPNHSSYEALSFVSG 173 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~----~~~~~f~~~~~~pf-l~sDp~~~ly~alGl~~~ 173 (251)
...++.-.+.+|.|..|-. ..+..+++.+++|+ .+.+...++-++.|....
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~ 90 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR 90 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc
Confidence 3455556688999998854 35667899999999 554788899999998653
No 346
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=29.87 E-value=34 Score=29.91 Aligned_cols=66 Identities=9% Similarity=0.127 Sum_probs=45.3
Q ss_pred CCccccCCCCCcEEecCCCCeEeCCCccCCCcEEEEEEccCCChhhHHHHHHHH-Hc----HHHHHHcCCEEEEEeCCCH
Q 025522 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AK----KDVMDASGVALVLIGPGSV 141 (251)
Q Consensus 67 ~~~~~g~~ap~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~~~Cp~C~~el~~L~-~~----~~~~~~~gv~vVaVs~~~~ 141 (251)
...+..+.+|-|++.|.+|.++-.+. ++..+.++|+ +++++.++- ++ .++ .+.+++|+.|+-+..
T Consensus 69 ~I~EKL~~VPVF~Itn~~G~Pll~~~--~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~-~~~~~kV~pvsL~kv 138 (279)
T 4e6z_A 69 PIEEKLEVIPVFLITNYNSSPYIFQE--NEKQVCYMFL-------CPYDAENMLNDMIKYNGMK-YNGNIKIHNITMKKA 138 (279)
T ss_dssp CHHHHSTTSEEEEEECTTCCBCCEEE--TTEEEEEEES-------SHHHHHHHHHHHHHHCHHH-HTTSCEEEEEEHHHH
T ss_pred hHHHHhcCCCEEEEEcCCCCEEEecC--CCCeEEEEEC-------CHHHHHHHHHHHHhccCcc-cccCceEEEecHHHH
Confidence 34577888999999999999886543 3445555554 677777654 32 122 256899999998766
Q ss_pred H
Q 025522 142 E 142 (251)
Q Consensus 142 ~ 142 (251)
.
T Consensus 139 y 139 (279)
T 4e6z_A 139 Y 139 (279)
T ss_dssp H
T ss_pred H
Confidence 4
No 347
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=28.88 E-value=59 Score=27.98 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=49.7
Q ss_pred cccCCCCCcEEecCCCCeEeCCCccC------CCcEEEEEEccCCChhhHHHHHHHHH-------cHHHHH--HcCCEEE
Q 025522 70 DTKNLLDTVKVYDVNGNAIPISDLWK------DRKAVVAFARHFGCVLCRKRADYLAA-------KKDVMD--ASGVALV 134 (251)
Q Consensus 70 ~~g~~ap~f~l~d~~G~~v~ls~l~~------~~~vVLvF~R~~~Cp~C~~el~~L~~-------~~~~~~--~~gv~vV 134 (251)
+..+.+|-|++.|.+|.++-.+.--. +..+.++|+ +++++.++-. ..+... ..+++|+
T Consensus 9 ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 9 EKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp HHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred HHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 45677899999999999876653211 234555554 5665554443 222111 3579999
Q ss_pred EEeCCCHHHHHHHH--HHhCCce-EEEcC
Q 025522 135 LIGPGSVEQARTFS--EQTKFKG-VYADP 160 (251)
Q Consensus 135 aVs~~~~~~~~~f~--~~~~~pf-l~sDp 160 (251)
.|+-+...++..-- +..++.| ++.|+
T Consensus 82 ~vsL~~vyql~~~~~~k~~~l~F~fvP~~ 110 (252)
T 4ev1_A 82 AVPLGVIYQQLQQTKKDPNRLLFAFKPVD 110 (252)
T ss_dssp EEEHHHHHHHHHHTTTCTTCEEEEEECCH
T ss_pred EeeHHHHHHHHHhhccCCcCceEEEcCCH
Confidence 99988764432211 1234556 66554
No 348
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=28.86 E-value=69 Score=30.07 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=13.5
Q ss_pred EccCCChhhHHHHHHHHH
Q 025522 104 ARHFGCVLCRKRADYLAA 121 (251)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~ 121 (251)
|-..|||+|.+--..|.+
T Consensus 23 y~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 23 FSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHHH
Confidence 446799999987776664
No 349
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=28.37 E-value=64 Score=27.05 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=22.5
Q ss_pred cHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 122 ~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
....+++.|+.+..++.++...++...+..++.
T Consensus 171 ~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 203 (287)
T 3a1c_A 171 AVQELKRMGIKVGMITGDNWRSAEAISRELNLD 203 (287)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 344556677777777777777677777777665
No 350
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=26.91 E-value=56 Score=31.06 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=38.5
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC
Q 025522 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN 161 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~ 161 (251)
-+..|.++..+|++.|..+++...+..+.+.++++++++.-|+.+.+
T Consensus 66 l~~sL~~L~~~L~~~G~~L~v~~G~~~~vl~~L~~~~~~~~V~~n~~ 112 (537)
T 3fy4_A 66 LLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYD 112 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHTTSCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHcCCCEEEEecc
Confidence 45678888999999999999988776788999999988766777754
No 351
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=26.85 E-value=1.1e+02 Score=24.11 Aligned_cols=55 Identities=7% Similarity=-0.014 Sum_probs=35.0
Q ss_pred EEecCCCCeEeCCCccC--CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC
Q 025522 79 KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (251)
Q Consensus 79 ~l~d~~G~~v~ls~l~~--~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~ 138 (251)
.+.+.+|..+....+.. +.+.+|+|+.+.++..- .+....+.|.+.|..|+++-.
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 66778888776654422 23567788877665322 223445666778999999864
No 352
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=26.84 E-value=22 Score=26.72 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=27.3
Q ss_pred cceEEEEcCCCCeEEEEEeCCCCCCCCCHHHHHHHhh
Q 025522 214 QGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACC 250 (251)
Q Consensus 214 ~gg~fVid~ggg~I~~~h~~~~~~D~~~~~eIL~al~ 250 (251)
.||.|.|.-+ |+++|... -+.-|+.++|.+.++
T Consensus 53 ~gG~FeV~vd-g~lVwsRk---~gGFPd~keLkq~VR 85 (107)
T 3dex_A 53 TGGVFVVRVD-DEVVWDRR---EQGFPEPTAVKRLVR 85 (107)
T ss_dssp SSSCEEEEET-TEEEEEHH---HHCSCCHHHHHHHHH
T ss_pred CCceEEEEEC-CEEEEEec---CCCCCCHHHHHHHHH
Confidence 5788988766 59999987 577899999998876
No 353
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=26.68 E-value=59 Score=30.20 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=36.5
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeC----CCHHHHHHHHHHhCCceEEEcCC
Q 025522 115 RADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGVYADPN 161 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~----~~~~~~~~f~~~~~~pfl~sDp~ 161 (251)
.+..|.++..+|++.|..++.+.. +..+.+.++++++++.-|++|.+
T Consensus 54 l~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~~v~~~~~ 104 (471)
T 1dnp_A 54 INAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQ 104 (471)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCCEEEEecc
Confidence 466788889999999999999843 34478889999998877666433
No 354
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=26.56 E-value=1.4e+02 Score=24.13 Aligned_cols=37 Identities=8% Similarity=0.128 Sum_probs=29.3
Q ss_pred HHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 119 L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
..+...+++++|+.++.++-.+...++.+.++.++..
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence 3444566778899999999888888999998888763
No 355
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=26.19 E-value=1e+02 Score=28.67 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=36.6
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCCceEEEc
Q 025522 115 RADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFKGVYAD 159 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~~pfl~sD 159 (251)
.+..|.++..+|++.|..|+.+..++ .+.+.++++++++.-|+.|
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~V~~~ 108 (509)
T 1u3d_A 63 LKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFN 108 (509)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCEEEEe
Confidence 46778888999999999999986544 4889999999998775554
No 356
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=26.11 E-value=85 Score=23.68 Aligned_cols=36 Identities=8% Similarity=0.132 Sum_probs=29.1
Q ss_pred HHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 119 L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
..+...++++.|+.++.++..+.+.++...+..++.
T Consensus 94 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 94 VLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 445566777889999999999888888888888764
No 357
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=25.86 E-value=84 Score=27.11 Aligned_cols=32 Identities=9% Similarity=0.230 Sum_probs=26.7
Q ss_pred cCCEEEEEeCCCHHHHHHHHHHhCCceEEEcC
Q 025522 129 SGVALVLIGPGSVEQARTFSEQTKFKGVYADP 160 (251)
Q Consensus 129 ~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp 160 (251)
.+++|++|.--+.+.+++|+++++++..|.|.
T Consensus 47 ~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~ 78 (350)
T 4had_A 47 ENCVVTAIASRDLTRAREMADRFSVPHAFGSY 78 (350)
T ss_dssp SSEEEEEEECSSHHHHHHHHHHHTCSEEESSH
T ss_pred CCeEEEEEECCCHHHHHHHHHHcCCCeeeCCH
Confidence 47999999988999999999999987555553
No 358
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=25.83 E-value=99 Score=23.24 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=39.3
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHhCCceEEEcCChhHHHHcCCcccc
Q 025522 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGVYADPNHSSYEALSFVSGV 174 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~-----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~~~ 174 (251)
...+++..+++|.|..|-. ..+..+++++++|+++.+...++-++.|.....
T Consensus 40 ~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~Gk~~~v 96 (122)
T 3o85_A 40 LKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNALGRACNVSVPT 96 (122)
T ss_dssp HHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHHHHhCCCCCE
Confidence 3445556688999988742 356778899999997778888999999987653
No 359
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=25.47 E-value=90 Score=24.13 Aligned_cols=41 Identities=7% Similarity=0.093 Sum_probs=30.5
Q ss_pred HHHcHHHHHHcCCEEEEEeCCC---HHHHHHHHHHhCCce-EEEc
Q 025522 119 LAAKKDVMDASGVALVLIGPGS---VEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 119 L~~~~~~~~~~gv~vVaVs~~~---~~~~~~f~~~~~~pf-l~sD 159 (251)
..+...+++++|+.|+.++.-+ ...+..|++++++++ ++.+
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 3444556678999998888655 467888999999998 5544
No 360
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=25.46 E-value=1.2e+02 Score=22.54 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEEEeCCC-H----HHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~-~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
...++...+.+|.|..|- + ..+..+++++++|+++.+...++-++.|...
T Consensus 38 ~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~G~~~ 92 (120)
T 1xbi_A 38 TKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGLEV 92 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHHHHHTTCSS
T ss_pred HHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHHHHHhCCCC
Confidence 445556678889988874 2 3577889999999977788889999999873
No 361
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=25.39 E-value=53 Score=25.81 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=27.0
Q ss_pred HHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 120 ~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
.+....++++|+.+++++.++...++...++.++.
T Consensus 92 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 92 RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 34455667788999888888887888888888875
No 362
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=25.12 E-value=89 Score=23.59 Aligned_cols=34 Identities=9% Similarity=0.109 Sum_probs=27.6
Q ss_pred HcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 121 ~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
+...++++.|+.++.++.++.+.++...+..++.
T Consensus 91 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 91 EALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 4456677889999999999888888888888776
No 363
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=24.92 E-value=68 Score=24.80 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=29.7
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCCc
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK 154 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~-~~~~~~f~~~~~~p 154 (251)
+...+...++++.|+.+++++..+ ...++.+.+..++.
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred hhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 344455666778899999999888 68888888888876
No 364
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=24.56 E-value=1.2e+02 Score=23.33 Aligned_cols=35 Identities=6% Similarity=-0.004 Sum_probs=29.6
Q ss_pred HcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 121 ~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
+...+++++|+.++.++..+...++.+.++.++..
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~ 76 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL 76 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce
Confidence 35666778999999999998888999999988875
No 365
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=24.37 E-value=88 Score=24.16 Aligned_cols=65 Identities=12% Similarity=0.217 Sum_probs=43.3
Q ss_pred CcEEecCCCCeEeCCCcc-CC-CcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 77 TVKVYDVNGNAIPISDLW-KD-RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 77 ~f~l~d~~G~~v~ls~l~-~~-~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
..-+.|.||..+. ...+ .. +..+..|... ..+ ...+++++|+.++.++.++...++.++++.++.
T Consensus 13 k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~~-------~~~-----~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTD-DRVLIDSDGREFVSVHRG-------DGL-----GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp SEEEECCTTTTSC-SCCEECTTCCEEEEEEHH-------HHH-----HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred CEEEEeCCCCcCc-CCEeecCCccHhHhcccc-------cHH-----HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 3567899998776 3332 11 2222222111 111 467778899999999999888999999999987
No 366
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.25 E-value=42 Score=27.28 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=17.7
Q ss_pred CCChhhHHHHHHHHHcHHHHH
Q 025522 107 FGCVLCRKRADYLAAKKDVMD 127 (251)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~~~ 127 (251)
..|+-||.++.+|++....+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 469999999999999876654
No 367
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=24.20 E-value=69 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=28.9
Q ss_pred cHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 122 ~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
...+++++|+.++.++..+...++...++.++..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~ 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE
Confidence 3566778999999999998889999999988874
No 368
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=24.20 E-value=1.3e+02 Score=27.58 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=34.7
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCceEEEcCC
Q 025522 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGVYADPN 161 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sDp~ 161 (251)
.+..|+++..+|++.|..++.+..+..+.+.++++ ++.-|++|.+
T Consensus 54 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~--~~~~v~~~~~ 98 (440)
T 2e0i_A 54 MINSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN--KVDAIYVNED 98 (440)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT--TCSEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc--CCCEEEEecc
Confidence 46678888999999999999987666678888877 5555776544
No 369
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=24.02 E-value=91 Score=24.26 Aligned_cols=34 Identities=6% Similarity=-0.024 Sum_probs=28.9
Q ss_pred cHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 122 ~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
...++++.|+.++.++..+...++.+.++.++..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~ 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce
Confidence 4566778899999999998888999999988875
No 370
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=23.95 E-value=63 Score=21.88 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=22.7
Q ss_pred EEEEeCCCHHHHHHHHHHhCCce-EEEc
Q 025522 133 LVLIGPGSVEQARTFSEQTKFKG-VYAD 159 (251)
Q Consensus 133 vVaVs~~~~~~~~~f~~~~~~pf-l~sD 159 (251)
=|.|.+......+++.++++++| ++.+
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~ 69 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVE 69 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeh
Confidence 36789988899999999999999 6543
No 371
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=23.65 E-value=1e+02 Score=24.23 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=28.9
Q ss_pred HHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
..++++.|+.++.++.++.+.++...++.++..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~ 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc
Confidence 566788999999999999899999999998875
No 372
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=23.43 E-value=1.5e+02 Score=21.95 Aligned_cols=49 Identities=14% Similarity=0.185 Sum_probs=37.9
Q ss_pred HHHHHcCCEEEEEeCCC-----HHHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 124 DVMDASGVALVLIGPGS-----VEQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 124 ~~~~~~gv~vVaVs~~~-----~~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
..++...+.+|.|..|- ...+..+++++++|+++.+...++-++.|...
T Consensus 37 kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG~a~G~~~ 90 (119)
T 1rlg_A 37 KAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEV 90 (119)
T ss_dssp HHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHHHHHHTTCSS
T ss_pred HHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHHHHHHhCCCC
Confidence 34445568888888763 24677899999999977788889999999873
No 373
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=22.99 E-value=1.3e+02 Score=22.45 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=38.5
Q ss_pred HHHHHHcCCEEEEEeCCC-H----HHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~-~----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
...++...+.+|.|..|- + ..+..+++++++|+++.+...++-++.|...
T Consensus 37 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eLG~a~G~~~ 91 (124)
T 2fc3_A 37 TKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGIEV 91 (124)
T ss_dssp HHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHHHHHTTCSS
T ss_pred HHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCC
Confidence 344455568899998874 2 3577889999999977788899999999874
No 374
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=22.74 E-value=76 Score=27.47 Aligned_cols=52 Identities=21% Similarity=0.153 Sum_probs=36.8
Q ss_pred CCh-hhHHHHHHHHHcHHHHHH-cCCEEEEEeCCCHHHHHHHHHHhCCceEEEc
Q 025522 108 GCV-LCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFKGVYAD 159 (251)
Q Consensus 108 ~Cp-~C~~el~~L~~~~~~~~~-~gv~vVaVs~~~~~~~~~f~~~~~~pfl~sD 159 (251)
||. .-+.+++.++.+...+.. .+++|++|.--+.+.+++++++++++-.|.|
T Consensus 32 G~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d 85 (393)
T 4fb5_A 32 GTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATAD 85 (393)
T ss_dssp CCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESC
T ss_pred cCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCC
Confidence 443 456677777777666543 4799999998888899999999887645544
No 375
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=22.64 E-value=1.3e+02 Score=22.21 Aligned_cols=50 Identities=6% Similarity=0.141 Sum_probs=38.3
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHhCCceEEEcCChhHHHHcCCcc
Q 025522 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGVYADPNHSSYEALSFVS 172 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~-----~~~~~f~~~~~~pfl~sDp~~~ly~alGl~~ 172 (251)
...++...+.+|.|..|-. ..+..+++++++|+++.+...++-++.|...
T Consensus 38 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG~a~G~~~ 92 (120)
T 1vq8_F 38 TKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEV 92 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHHHHHHTTCSS
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHHHHHhCCCC
Confidence 3445556688888888742 3577889999999977788889999999874
No 376
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=22.62 E-value=46 Score=23.71 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=27.6
Q ss_pred HHHHHHHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhC
Q 025522 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (251)
Q Consensus 115 el~~L~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~ 152 (251)
-.+...+...++++.|+.++.++..+...++...++.+
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~ 56 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELE 56 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCC
Confidence 34566667778888999999999887665555555554
No 377
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.60 E-value=88 Score=24.23 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.1
Q ss_pred HHHHHcHHHHHHcCCEEEEEeCCCH---HHHHHHHHHhCCc
Q 025522 117 DYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (251)
Q Consensus 117 ~~L~~~~~~~~~~gv~vVaVs~~~~---~~~~~f~~~~~~p 154 (251)
+...+...+++++|+.+++++..+. +.++...+..++.
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4455666777889999999997765 7888888988874
No 378
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=22.57 E-value=1.5e+02 Score=24.33 Aligned_cols=60 Identities=7% Similarity=-0.010 Sum_probs=37.4
Q ss_pred CCCCc-EEecCCCCeEeCCCccC--CCcEEEEEEccCCChhhHHHHHHHHHcHHHHHHcCCEEEEEeC
Q 025522 74 LLDTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (251)
Q Consensus 74 ~ap~f-~l~d~~G~~v~ls~l~~--~~~vVLvF~R~~~Cp~C~~el~~L~~~~~~~~~~gv~vVaVs~ 138 (251)
...++ .+...+|..+....+.. +.+.+|+|+-+.++..- .+....+.|.+.|..|+++..
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 34455 67778888776554422 23557777777665332 233445667778999999953
No 379
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=22.18 E-value=82 Score=25.18 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=28.9
Q ss_pred HHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCce
Q 025522 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (251)
Q Consensus 123 ~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~pf 155 (251)
...+++.|+.+..|+.++.+.++.++++.++..
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~ 93 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL 93 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE
Confidence 466788999999999999899999999998875
No 380
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=22.07 E-value=1.1e+02 Score=23.47 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=20.6
Q ss_pred cHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCC
Q 025522 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (251)
Q Consensus 122 ~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~ 153 (251)
...++++.|+.+++++....+.++...+..++
T Consensus 78 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 109 (205)
T 3m9l_A 78 LVRELAGRGYRLGILTRNARELAHVTLEAIGL 109 (205)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCeEEEEeCCchHHHHHHHHHcCc
Confidence 34555566777777777766666666666554
No 381
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=21.34 E-value=66 Score=24.07 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=20.7
Q ss_pred EEEeCCCHHHHHHHHHHhCCce-EEE
Q 025522 134 VLIGPGSVEQARTFSEQTKFKG-VYA 158 (251)
Q Consensus 134 VaVs~~~~~~~~~f~~~~~~pf-l~s 158 (251)
|.+.-++.|.+.+|++++|++| |.-
T Consensus 54 v~L~F~skE~AiayAek~G~~y~V~e 79 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGIEYRVIL 79 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTCEEEECC
T ss_pred ceEecCCHHHHHHHHHHcCCEEEEeC
Confidence 3556688999999999999999 653
No 382
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=20.85 E-value=72 Score=25.36 Aligned_cols=38 Identities=8% Similarity=0.074 Sum_probs=29.4
Q ss_pred HHHHcHHHHHHcCCEEEEEeCCCH---------------HHHHHHHHHhCCce
Q 025522 118 YLAAKKDVMDASGVALVLIGPGSV---------------EQARTFSEQTKFKG 155 (251)
Q Consensus 118 ~L~~~~~~~~~~gv~vVaVs~~~~---------------~~~~~f~~~~~~pf 155 (251)
...+...+++++|+.++.++..+. +.++...++.++.|
T Consensus 60 g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 112 (218)
T 2o2x_A 60 QMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV 112 (218)
T ss_dssp GGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce
Confidence 344455667788999999998877 67888888888765
No 383
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=20.80 E-value=1.9e+02 Score=22.76 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=24.9
Q ss_pred HHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 120 ~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
.+....+++.|+++.+++.++.+.++...+..++.
T Consensus 116 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 116 LDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 33445567788999888887777777777776653
No 384
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=20.50 E-value=1.2e+02 Score=23.80 Aligned_cols=35 Identities=9% Similarity=0.195 Sum_probs=27.4
Q ss_pred HHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 120 ~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
.+...++++.|+.+..++.++...++...++.++.
T Consensus 89 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 89 PYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 34455667789999999998888888888888865
No 385
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.45 E-value=2.1e+02 Score=23.35 Aligned_cols=31 Identities=6% Similarity=0.027 Sum_probs=22.1
Q ss_pred CCEEEEEeCCCH-HHHHHHHHHhCCceEEEcC
Q 025522 130 GVALVLIGPGSV-EQARTFSEQTKFKGVYADP 160 (251)
Q Consensus 130 gv~vVaVs~~~~-~~~~~f~~~~~~pfl~sDp 160 (251)
+.+|++|..+.+ ..+.++++++++|+...++
T Consensus 30 ~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 30 PARVALLVCDRPGAKVIERAARENVPAFVFSP 61 (212)
T ss_dssp CEEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred CCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCc
Confidence 678877776643 4688899999999833343
No 386
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=20.45 E-value=1.3e+02 Score=23.22 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=26.8
Q ss_pred HHcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 120 ~~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
.+....+++.|+.++.++..+.+.++...+..++.
T Consensus 102 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 102 PQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred HHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 34456667789999999988888788888877764
No 387
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=20.39 E-value=45 Score=25.87 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=28.3
Q ss_pred CcEEecCCCCeEeCCCccCCCcEEEEEEcc-CCChhhHHHHHHHHHcHH
Q 025522 77 TVKVYDVNGNAIPISDLWKDRKAVVAFARH-FGCVLCRKRADYLAAKKD 124 (251)
Q Consensus 77 ~f~l~d~~G~~v~ls~l~~~~~vVLvF~R~-~~Cp~C~~el~~L~~~~~ 124 (251)
.+++.|..|+.+-+ .+| |-+- .|||.|..++.++.+.+.
T Consensus 24 ~v~l~d~~Gk~vll-~F~--------~t~Cp~~Cp~~~~~l~~l~~~~~ 63 (170)
T 4hde_A 24 PFGTKDLKGKVWVA-DFM--------FTNCQTVCPPMTANMAKLQKMAK 63 (170)
T ss_dssp EEEHHHHTTSCEEE-EEE--------CTTCSSSHHHHHHHHHHHHHHHH
T ss_pred EEeHHHhCCCEEEE-EEE--------CCCCCCcccHHHHHHHHHHHhhh
Confidence 37777888986644 333 4454 699999999999988653
No 388
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=20.00 E-value=96 Score=23.92 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=23.7
Q ss_pred HcHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCc
Q 025522 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (251)
Q Consensus 121 ~~~~~~~~~gv~vVaVs~~~~~~~~~f~~~~~~p 154 (251)
+...++++.|+.++.++.++.+.++...+..++.
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 3445566778888888877777777777776654
Done!