BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025525
MACSSAALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQCPHLQAATSCNFTVPK
RSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLY
TGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVT
GGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGIKDLPEVLLGKPVDPHPGVEPSPAAKAC
EPGAAIDNFTN

High Scoring Gene Products

Symbol, full name Information P value
AOC4
allene oxide cyclase 4
protein from Arabidopsis thaliana 8.0e-69
AOC3
allene oxide cyclase 3
protein from Arabidopsis thaliana 3.5e-68
AOC2
allene oxide cyclase 2
protein from Arabidopsis thaliana 7.2e-68
AOC1
allene oxide cyclase 1
protein from Arabidopsis thaliana 1.5e-67

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025525
        (251 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2205349 - symbol:AOC4 "allene oxide cyclase 4"...   698  8.0e-69   1
TAIR|locus:2085974 - symbol:AOC3 "allene oxide cyclase 3"...   692  3.5e-68   1
TAIR|locus:2086009 - symbol:AOC2 "allene oxide cyclase 2"...   689  7.2e-68   1
TAIR|locus:2085999 - symbol:AOC1 "allene oxide cyclase 1"...   686  1.5e-67   1


>TAIR|locus:2205349 [details] [associations]
            symbol:AOC4 "allene oxide cyclase 4" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0009695 "jasmonic acid biosynthetic
            process" evidence=TAS] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 EMBL:AC011810
            GO:GO:0009695 eggNOG:NOG246500 HOGENOM:HOG000240167 KO:K10525
            ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308486 EMBL:AY141993
            EMBL:AY057636 IPI:IPI00548611 PIR:D86267 RefSeq:NP_172786.1
            UniGene:At.16133 ProteinModelPortal:Q93ZC5 SMR:Q93ZC5 STRING:Q93ZC5
            PaxDb:Q93ZC5 PRIDE:Q93ZC5 DNASU:837888 EnsemblPlants:AT1G13280.1
            GeneID:837888 KEGG:ath:AT1G13280 GeneFarm:2625 TAIR:At1g13280
            InParanoid:Q93ZC5 OMA:FFRTICS PhylomeDB:Q93ZC5
            Genevestigator:Q93ZC5 GermOnline:AT1G13280 Uniprot:Q93ZC5
        Length = 254

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 141/254 (55%), Positives = 179/254 (70%)

Query:     1 MACSSAALRTISSASVKLANSTSPTKSSSIL-VPFKLNNPFLITQCPHLQAATSCNFTVP 59
             M  +S+A  +IS  +++  +    +  S+ L      +N  + +  P L        +  
Sbjct:     1 MIMASSAAASISMITLRNLSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSST 60

Query:    60 KRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNK 118
                F     ++S+D  RPTK+QEL+VYE NE DR SPA L+L +KP    LGDLVPF+NK
Sbjct:    61 GGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNK 120

Query:   119 LYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYLA 178
             LYTGDL KR+GITAGLC+LI++ PEKKGDR+EA YSFYFGDYGHI+VQGPYLTYEDT+LA
Sbjct:   121 LYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLA 180

Query:   179 VTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGIK-DLPEVLLGKPVDPHPGVEPSPAA 237
             +TGGSG+FEG YGQVKL+QLV+P KLFYTFYLKG+  DLP  L GK V+P   V+P+  A
Sbjct:   181 ITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEA 240

Query:   238 KACEPGAAIDNFTN 251
             +A +PGA I NFTN
Sbjct:   241 QATQPGATIANFTN 254


>TAIR|locus:2085974 [details] [associations]
            symbol:AOC3 "allene oxide cyclase 3" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0016853 "isomerase activity" evidence=IEA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA;TAS] [GO:0046423
            "allene-oxide cyclase activity" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0009620 "response to
            fungus" evidence=IEP;RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009723 "response to ethylene stimulus"
            evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
            signaling pathway" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0035556
            "intracellular signal transduction" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA] [GO:0052542
            "defense response by callose deposition" evidence=RCA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 GO:GO:0005886
            GO:GO:0005774 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AB028607 GO:GO:0009695 GO:GO:0009651 GO:GO:0009620
            eggNOG:NOG246500 HOGENOM:HOG000240167 KO:K10525
            ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308485 EMBL:AY087359
            IPI:IPI00526976 RefSeq:NP_566777.1 UniGene:At.27910
            ProteinModelPortal:Q9LS01 SMR:Q9LS01 STRING:Q9LS01 PaxDb:Q9LS01
            PRIDE:Q9LS01 EnsemblPlants:AT3G25780.1 GeneID:822169
            KEGG:ath:AT3G25780 GeneFarm:2627 TAIR:At3g25780 InParanoid:Q9LS01
            OMA:TYEESYL PhylomeDB:Q9LS01 Genevestigator:Q9LS01
            GermOnline:AT3G25780 Uniprot:Q9LS01
        Length = 258

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 147/261 (56%), Positives = 183/261 (70%)

Query:     1 MACSSAALRTISSASVKLANSTSPTKSS--SILVPFK--LNNPFLITQCPHL----QAAT 52
             MA SSAA+ ++ S S+   N+ S    S  S L+ F     N  + +  P      ++ T
Sbjct:     1 MASSSAAM-SLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTT 59

Query:    53 SCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGD 111
             S N  V +  F   +    +++ RP+K+QEL+VYE+NE DR SPA L+L +KP    LGD
Sbjct:    60 SKNLNVTRAFFW--NWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGD 117

Query:   112 LVPFSNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLT 171
             LVPF+NKLYTGDL+KR+GITAGLC+LI++ PEK GDR+EA YSFYFGDYGH++VQG YLT
Sbjct:   118 LVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLT 177

Query:   172 YEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPG 230
             YEDT+LAVTGGSGIFEG YGQVKL+QLV+P KLFYTFYLKG+  DLP  L G  V P   
Sbjct:   178 YEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKD 237

Query:   231 VEPSPAAKACEPGAAIDNFTN 251
             V+P+P AKA EP   I NFTN
Sbjct:   238 VKPAPEAKAMEPSGVISNFTN 258


>TAIR|locus:2086009 [details] [associations]
            symbol:AOC2 "allene oxide cyclase 2" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=TAS] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009409 "response to cold" evidence=IEP] [GO:0010319 "stromule"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 GO:GO:0009570
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607 GO:GO:0009695
            GO:GO:0009409 GO:GO:0009941 GO:GO:0009535 HOGENOM:HOG000240167
            KO:K10525 ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308484
            EMBL:AY054131 EMBL:AF380630 IPI:IPI00520951 RefSeq:NP_566776.1
            UniGene:At.6411 PDB:1Z8K PDB:2BRJ PDB:2DIO PDB:2GIN PDB:2Q4I
            PDBsum:1Z8K PDBsum:2BRJ PDBsum:2DIO PDBsum:2GIN PDBsum:2Q4I
            ProteinModelPortal:Q9LS02 SMR:Q9LS02 STRING:Q9LS02 PaxDb:Q9LS02
            PRIDE:Q9LS02 DNASU:822168 EnsemblPlants:AT3G25770.1 GeneID:822168
            KEGG:ath:AT3G25770 GeneFarm:2623 TAIR:At3g25770 eggNOG:NOG312289
            InParanoid:Q9LS02 OMA:NIENPRP PhylomeDB:Q9LS02
            BioCyc:MetaCyc:AT3G25770-MONOMER EvolutionaryTrace:Q9LS02
            Genevestigator:Q9LS02 GermOnline:AT3G25770 GO:GO:0010319
            Uniprot:Q9LS02
        Length = 253

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 142/255 (55%), Positives = 179/255 (70%)

Query:     1 MACSSAALRTISSASVKLANSTSPTKSSSILVPFK-LNNPFLITQCPHLQAATSCNFTVP 59
             MA S+ +L++IS  ++   +       SS+L   K   N  + +        +S  FT  
Sbjct:     1 MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGISSNGSDFSYPSS--FTAK 58

Query:    60 KRSFTCR--SQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSN 117
             K     R  SQ  + ++PRP+KVQEL VYEINE DR SP  L+ +   +  LGDLVPF+N
Sbjct:    59 KNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTN 118

Query:   118 KLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDTYL 177
             KLYTGDL+KR+GITAGLC++IE+ PEKKG+R+EA YSFYFGDYGH++VQGPYLTYED++L
Sbjct:   119 KLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFL 178

Query:   178 AVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPA 236
             A+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+  DLP  L G PV P   +EP+P 
Sbjct:   179 AITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPE 238

Query:   237 AKACEPGAAIDNFTN 251
             AKA EP   I N+TN
Sbjct:   239 AKALEPSGVISNYTN 253


>TAIR|locus:2085999 [details] [associations]
            symbol:AOC1 "allene oxide cyclase 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=TAS] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009269 "response to desiccation" evidence=IEP]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AB028607 GO:GO:0009695
            GO:GO:0009941 GO:GO:0009535 EMBL:AJ308483 EMBL:AK175392
            EMBL:AK176777 EMBL:AB039931 IPI:IPI00525444 RefSeq:NP_189204.1
            UniGene:At.26518 PDB:1ZVC PDBsum:1ZVC ProteinModelPortal:Q9LS03
            SMR:Q9LS03 STRING:Q9LS03 PaxDb:Q9LS03 PRIDE:Q9LS03 DNASU:822167
            EnsemblPlants:AT3G25760.1 GeneID:822167 KEGG:ath:AT3G25760
            GeneFarm:2276 TAIR:At3g25760 eggNOG:NOG246500 HOGENOM:HOG000240167
            InParanoid:Q9LS03 KO:K10525 OMA:GNTENPR PhylomeDB:Q9LS03
            ProtClustDB:PLN02343 EvolutionaryTrace:Q9LS03 Genevestigator:Q9LS03
            GermOnline:AT3G25760 GO:GO:0046423 Uniprot:Q9LS03
        Length = 254

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 145/257 (56%), Positives = 184/257 (71%)

Query:     1 MACSSAALRTISSASVKLANSTSPTKSSSILVPFKLNNPFLITQC-PHLQAATSCNFTVP 59
             MA S+ +L++IS  ++   + +     SS+L   K    F I+   P   + TS  FT P
Sbjct:     1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSFQNFGISSNGPGSSSPTS--FT-P 57

Query:    60 KRSFT---CRSQ-ANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPF 115
             K+  T     SQ   ++++PRP+KVQEL VYEIN+ DR SP  L+ +      LGDLVPF
Sbjct:    58 KKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPF 117

Query:   116 SNKLYTGDLQKRLGITAGLCILIENKPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYEDT 175
             +NKLYTGDL+KR+GITAGLC++IE+ PEK GDR+EA YSFYFGDYGH++VQGPYLTYED+
Sbjct:   118 TNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDS 177

Query:   176 YLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPS 234
             +LA+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+  DLP  L+G PV P   VEP+
Sbjct:   178 FLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPA 237

Query:   235 PAAKACEPGAAIDNFTN 251
             P AKA +P   + NFTN
Sbjct:   238 PEAKALKPSGVVSNFTN 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      251       251   0.00081  114 3  11 22  0.47    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.08u 0.08s 23.16t   Elapsed:  00:00:01
  Total cpu time:  23.08u 0.08s 23.16t   Elapsed:  00:00:01
  Start:  Fri May 10 13:05:05 2013   End:  Fri May 10 13:05:06 2013

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