Your job contains 1 sequence.
>025526
MAAKSQIVTGFTMPMTPAPSSSSSSSSSSLCMVKKPLTTSFFNGGVGALKVTRLRIAPSS
RSHCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQ
ATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALK
AQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKFVFPLSLLEFPVFSASAT
SLVLLVMVAIA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025526
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206290 - symbol:PTAC4 "plastid transcriptiona... 685 1.9e-67 1
UNIPROTKB|Q9KRG4 - symbol:VC1678 "Phage shock protein A" ... 245 8.0e-21 1
TIGR_CMR|VC_1678 - symbol:VC_1678 "phage shock protein A"... 245 8.0e-21 1
TIGR_CMR|SO_1807 - symbol:SO_1807 "phage shock protein A"... 242 1.7e-20 1
TIGR_CMR|CPS_3772 - symbol:CPS_3772 "phage shock protein ... 235 9.2e-20 1
TIGR_CMR|CPS_4751 - symbol:CPS_4751 "phage shock protein ... 231 2.5e-19 1
UNIPROTKB|P0AFM6 - symbol:pspA species:83333 "Escherichia... 229 4.0e-19 1
UNIPROTKB|Q9F4H4 - symbol:pspA "Phage shock protein A" sp... 222 2.2e-18 1
UNIPROTKB|Q81KD9 - symbol:BAS4700 "Uncharacterized protei... 172 4.4e-13 1
TIGR_CMR|BA_5061 - symbol:BA_5061 "conserved hypothetical... 172 4.4e-13 1
UNIPROTKB|Q87YK9 - symbol:PSPTO_3786 "PspA/IM30 family pr... 124 7.6e-06 1
MGI|MGI:1932395 - symbol:Rrbp1 "ribosome binding protein ... 120 0.00048 1
>TAIR|locus:2206290 [details] [associations]
symbol:PTAC4 "plastid transcriptionally active 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016020 "membrane" evidence=ISS] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0016050
"vesicle organization" evidence=IMP] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009295 "nucleoid" evidence=IDA] [GO:0009508 "plastid
chromosome" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009570 eggNOG:COG1842 InterPro:IPR007157 Pfam:PF04012
GO:GO:0009941 EMBL:AC004512 GO:GO:0010027 GO:GO:0009706
GO:GO:0009535 GO:GO:0016050 GO:GO:0009508 KO:K03969 OMA:FQETATS
EMBL:AY045845 EMBL:AY117153 IPI:IPI00537473 PIR:T02347
RefSeq:NP_564846.1 UniGene:At.21729 STRING:O80796 PaxDb:O80796
PRIDE:O80796 EnsemblPlants:AT1G65260.1 GeneID:842833
KEGG:ath:AT1G65260 GeneFarm:3194 TAIR:At1g65260
HOGENOM:HOG000227268 InParanoid:O80796 PhylomeDB:O80796
ProtClustDB:CLSN2689028 Genevestigator:O80796 GermOnline:AT1G65260
Uniprot:O80796
Length = 330
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 145/223 (65%), Positives = 171/223 (76%)
Query: 1 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPS 59
MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A
Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60
Query: 60 SRSHCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMR 119
+R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMR
Sbjct: 61 NRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMR 115
Query: 120 QATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANAL 179
QATAQVLASQK+L+NK KAA+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+ADNA AL
Sbjct: 116 QATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATAL 175
Query: 180 KAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAK 222
K QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AK
Sbjct: 176 KTQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAK 218
>UNIPROTKB|Q9KRG4 [details] [associations]
symbol:VC1678 "Phage shock protein A" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0009271 "phage
shock" evidence=ISS] InterPro:IPR007157 Pfam:PF04012
GenomeReviews:AE003852_GR KO:K03969 OMA:FQETATS GO:GO:0009271
InterPro:IPR014319 TIGRFAMs:TIGR02977 EMBL:AE004246 PIR:H82169
RefSeq:NP_231314.1 DNASU:2613809 GeneID:2613809 KEGG:vch:VC1678
PATRIC:20082418 ProtClustDB:CLSK874495 Uniprot:Q9KRG4
Length = 222
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/146 (37%), Positives = 80/146 (54%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V S +A+L EDPEK++ + EM D LV++R +A+ +A +K L K
Sbjct: 1 MGIFSRFADIVNSNISALLDKAEDPEKMIRLIIQEMEDTLVEVRTNSAKAMADKKELARK 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
++ EQ EDW KA LAL K EDLAR AL ++ L + + + L
Sbjct: 61 VESIEQQLEDWQNKATLALTKQREDLARAALIEKQKLQHVLKGLHTEQMLVEETIEKLTG 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
LE+KI E R+K+ L R+Q+A
Sbjct: 121 EIGKLETKITETRAKQQALAIRSQAA 146
>TIGR_CMR|VC_1678 [details] [associations]
symbol:VC_1678 "phage shock protein A" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009271 "phage shock" evidence=ISS]
InterPro:IPR007157 Pfam:PF04012 GenomeReviews:AE003852_GR KO:K03969
OMA:FQETATS GO:GO:0009271 InterPro:IPR014319 TIGRFAMs:TIGR02977
EMBL:AE004246 PIR:H82169 RefSeq:NP_231314.1 DNASU:2613809
GeneID:2613809 KEGG:vch:VC1678 PATRIC:20082418
ProtClustDB:CLSK874495 Uniprot:Q9KRG4
Length = 222
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/146 (37%), Positives = 80/146 (54%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V S +A+L EDPEK++ + EM D LV++R +A+ +A +K L K
Sbjct: 1 MGIFSRFADIVNSNISALLDKAEDPEKMIRLIIQEMEDTLVEVRTNSAKAMADKKELARK 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
++ EQ EDW KA LAL K EDLAR AL ++ L + + + L
Sbjct: 61 VESIEQQLEDWQNKATLALTKQREDLARAALIEKQKLQHVLKGLHTEQMLVEETIEKLTG 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
LE+KI E R+K+ L R+Q+A
Sbjct: 121 EIGKLETKITETRAKQQALAIRSQAA 146
>TIGR_CMR|SO_1807 [details] [associations]
symbol:SO_1807 "phage shock protein A" species:211586
"Shewanella oneidensis MR-1" [GO:0009271 "phage shock"
evidence=ISS] InterPro:IPR007157 Pfam:PF04012 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000227267 KO:K03969
OMA:FQETATS InterPro:IPR014319 TIGRFAMs:TIGR02977
RefSeq:NP_717415.1 DNASU:1169580 GeneID:1169580 KEGG:son:SO_1807
PATRIC:23523237 ProtClustDB:CLSK906439 Uniprot:Q8EG07
Length = 227
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 51/146 (34%), Positives = 83/146 (56%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A ++ S +A+L EDPEK++ + EM D LV++R +A+VLA +K L +
Sbjct: 1 MGIFSRFADIINSNISALLDKAEDPEKMVRLIIQEMEDTLVEVRSTSAKVLAEKKELHRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
E+ +DW KA+LAL K EDLA+ AL ++ A + L +L + L
Sbjct: 61 ISRVEEQVQDWQDKAELALSKDREDLAKAALVEKQKAAGLVDTLNQELAVLDEHIARLKD 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
LL+ K+ +A++++ T+ R Q+A
Sbjct: 121 EVSLLQEKLLDAKARQKTIILRTQTA 146
>TIGR_CMR|CPS_3772 [details] [associations]
symbol:CPS_3772 "phage shock protein A" species:167879
"Colwellia psychrerythraea 34H" [GO:0009271 "phage shock"
evidence=ISS] eggNOG:COG1842 InterPro:IPR007157 Pfam:PF04012
EMBL:CP000083 GenomeReviews:CP000083_GR HOGENOM:HOG000227267
KO:K03969 OMA:FQETATS InterPro:IPR014319 TIGRFAMs:TIGR02977
RefSeq:YP_270439.1 STRING:Q47XN1 DNASU:3518856 GeneID:3518856
KEGG:cps:CPS_3772 PATRIC:21470461
BioCyc:CPSY167879:GI48-3794-MONOMER Uniprot:Q47XN1
Length = 221
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 50/146 (34%), Positives = 81/146 (55%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R ++ S N +L EDP K++ + EM D LV++R ++A+ LA +K L +
Sbjct: 1 MGIFSRFTDIINSNINNLLDKAEDPAKMVRLIIQEMEDTLVEVRSSSAKTLADKKELARQ 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
EQ +E W KA+LAL K EDLAR AL +K +++A AL +L ++ L
Sbjct: 61 VSRLEQDAEQWQAKAELALSKDREDLARAALMEKKKSSESAQALVDELAHTNEHLSKLQG 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
L+ K+ +A+ ++ + R +SA
Sbjct: 121 EISQLQDKLSDAKVRQKAIVIREKSA 146
>TIGR_CMR|CPS_4751 [details] [associations]
symbol:CPS_4751 "phage shock protein A" species:167879
"Colwellia psychrerythraea 34H" [GO:0009271 "phage shock"
evidence=ISS] eggNOG:COG1842 InterPro:IPR007157 Pfam:PF04012
EMBL:CP000083 GenomeReviews:CP000083_GR HOGENOM:HOG000227267
KO:K03969 InterPro:IPR014319 TIGRFAMs:TIGR02977 RefSeq:YP_271395.1
STRING:Q47UX7 DNASU:3519413 GeneID:3519413 KEGG:cps:CPS_4751
PATRIC:21472319 OMA:FARMEER BioCyc:CPSY167879:GI48-4757-MONOMER
Uniprot:Q47UX7
Length = 220
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 47/147 (31%), Positives = 83/147 (56%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M LF R +V + N++L E PEK++ + EM + LV++R A+ +A QK L K
Sbjct: 1 MGLFSRFTDIVNANLNSMLDKAEHPEKMIRMIIGEMEETLVEVRSTAAKNIAEQKTLARK 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
K ++ W+ KA++AL KG EDLA+ AL ++ L + Q ++++ +
Sbjct: 61 VKTTQEGVAHWHDKAEIALNKGREDLAKSALAQKHKCQAELTQLNEENVQLTDLLSAIQE 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSAK 222
+ + L+ K+ EA+ ++D L+ R +SA+
Sbjct: 121 DAQRLQDKLSEAKRRQDALRLRQESAE 147
>UNIPROTKB|P0AFM6 [details] [associations]
symbol:pspA species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0009271 "phage
shock" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] GO:GO:0005886 GO:GO:0005737 eggNOG:COG1842
InterPro:IPR007157 Pfam:PF04012 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009408
EMBL:X57560 PIR:C64879 RefSeq:NP_415820.1 RefSeq:YP_489572.1
ProteinModelPortal:P0AFM6 IntAct:P0AFM6 PRIDE:P0AFM6
EnsemblBacteria:EBESCT00000004615 EnsemblBacteria:EBESCT00000017700
GeneID:12933880 GeneID:945887 KEGG:ecj:Y75_p1279 KEGG:eco:b1304
PATRIC:32117880 EchoBASE:EB0769 EcoGene:EG10776
HOGENOM:HOG000227267 KO:K03969 OMA:FQETATS ProtClustDB:PRK10698
BioCyc:EcoCyc:EG10776-MONOMER BioCyc:ECOL316407:JW1297-MONOMER
Genevestigator:P0AFM6 GO:GO:0009271 InterPro:IPR014319
TIGRFAMs:TIGR02977 Uniprot:P0AFM6
Length = 222
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 49/146 (33%), Positives = 82/146 (56%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L +
Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
+ A +W KA+LAL K EDLAR AL ++ D +L+ ++ + + +
Sbjct: 61 IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKK 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
LE+K+ E R+++ L R Q+A
Sbjct: 121 EIGELENKLSETRARQQALMLRHQAA 146
>UNIPROTKB|Q9F4H4 [details] [associations]
symbol:pspA "Phage shock protein A" species:630 "Yersinia
enterocolitica" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR007157 Pfam:PF04012 InterPro:IPR014319
TIGRFAMs:TIGR02977 EMBL:AY008264 IntAct:Q9F4H4 Uniprot:Q9F4H4
Length = 221
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 48/146 (32%), Positives = 79/146 (54%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V + N +L EDP+K++ + EM D LV++R +A+ LA +K+L +
Sbjct: 1 MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
E ++W KA+LAL+K +EDLAR AL ++ L ++ + +
Sbjct: 61 IDHCESQQQEWQDKAELALRKDKEDLARAALIEKQKVVALIETLTREVATVDETLTRMKH 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSA 221
LESK+ E R+++ L R Q+A
Sbjct: 121 EITELESKLTETRARQQALTLRHQAA 146
>UNIPROTKB|Q81KD9 [details] [associations]
symbol:BAS4700 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR007157 Pfam:PF04012
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR KO:K03969
OMA:FQETATS HOGENOM:HOG000227268 RefSeq:NP_847252.1
RefSeq:YP_021711.1 RefSeq:YP_030944.1 DNASU:1084339
EnsemblBacteria:EBBACT00000013339 EnsemblBacteria:EBBACT00000018421
EnsemblBacteria:EBBACT00000023102 GeneID:1084339 GeneID:2816528
GeneID:2851519 KEGG:ban:BA_5061 KEGG:bar:GBAA_5061 KEGG:bat:BAS4700
ProtClustDB:CLSK904635 BioCyc:BANT260799:GJAJ-4754-MONOMER
BioCyc:BANT261594:GJ7F-4916-MONOMER Uniprot:Q81KD9
Length = 221
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 40/147 (27%), Positives = 77/147 (52%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M++F RL + S +++ EDP K+ +Q + +M D+ + ++ A +A +K+ +
Sbjct: 1 MSVFKRLRDLTMSNVYSLIEKAEDPVKMTDQYLRDMQADVQEAEKSVAAQIALEKKFKIL 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
+ E + +A +A+Q DLAR AL+ +++ N KA +Q K +NL
Sbjct: 61 FEEQEALVKKREEQAHMAVQASNLDLARRALEEKQNAEQKMNEYKASYEQNKAAADNLRL 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSAK 222
+ ++ E ++K++TL AR +AK
Sbjct: 121 KLEEMRKQLTELKNKRETLVARVNAAK 147
>TIGR_CMR|BA_5061 [details] [associations]
symbol:BA_5061 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007157 Pfam:PF04012 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K03969 OMA:FQETATS
HOGENOM:HOG000227268 RefSeq:NP_847252.1 RefSeq:YP_021711.1
RefSeq:YP_030944.1 DNASU:1084339 EnsemblBacteria:EBBACT00000013339
EnsemblBacteria:EBBACT00000018421 EnsemblBacteria:EBBACT00000023102
GeneID:1084339 GeneID:2816528 GeneID:2851519 KEGG:ban:BA_5061
KEGG:bar:GBAA_5061 KEGG:bat:BAS4700 ProtClustDB:CLSK904635
BioCyc:BANT260799:GJAJ-4754-MONOMER
BioCyc:BANT261594:GJ7F-4916-MONOMER Uniprot:Q81KD9
Length = 221
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 40/147 (27%), Positives = 77/147 (52%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M++F RL + S +++ EDP K+ +Q + +M D+ + ++ A +A +K+ +
Sbjct: 1 MSVFKRLRDLTMSNVYSLIEKAEDPVKMTDQYLRDMQADVQEAEKSVAAQIALEKKFKIL 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
+ E + +A +A+Q DLAR AL+ +++ N KA +Q K +NL
Sbjct: 61 FEEQEALVKKREEQAHMAVQASNLDLARRALEEKQNAEQKMNEYKASYEQNKAAADNLRL 120
Query: 196 NTRLLESKIQEARSKKDTLKARAQSAK 222
+ ++ E ++K++TL AR +AK
Sbjct: 121 KLEEMRKQLTELKNKRETLVARVNAAK 147
>UNIPROTKB|Q87YK9 [details] [associations]
symbol:PSPTO_3786 "PspA/IM30 family protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] eggNOG:COG1842 InterPro:IPR007157 Pfam:PF04012
EMBL:AE016853 GenomeReviews:AE016853_GR HOGENOM:HOG000287984
OMA:HLTKAKR RefSeq:NP_793560.1 DNASU:1185454 GeneID:1185454
KEGG:pst:PSPTO_3786 PATRIC:19999027 ProtClustDB:CLSK821863
BioCyc:PSYR223283:GJIX-3846-MONOMER Uniprot:Q87YK9
Length = 235
Score = 124 (48.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 77 NLFDRLARVVKSYANAILSSFEDPE--KILEQAVLEMNDDLVKMRQATAQVLASQKRLEN 134
+++ +L V+ A+ + S D +IL+Q + + ++ LVK R + A K
Sbjct: 4 SIWKKLVTAVRGGASEVGESIADANAIRILDQEIRDADNALVKARDGLITIKAKHKLSAQ 63
Query: 135 KCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLV 194
+ + + +W +A AL KGEE LA E A ++A DQ++ + +
Sbjct: 64 RLEEHATSIANWEGRAMQALNKGEEALAVEC-------ASKIAEIEALRDQEQELADQFG 116
Query: 195 SNTRLLESKIQEARSKKDTLKARAQSAK 222
LL+ ++ +A S+ +LK + + AK
Sbjct: 117 KQVSLLQEQVIKAESRIKSLKQQVEMAK 144
>MGI|MGI:1932395 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10090 "Mus
musculus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR007794 Pfam:PF05104 MGI:MGI:1932395 GO:GO:0007165
GO:GO:0015031 GO:GO:0030176 eggNOG:COG5651 CTD:6238
HOVERGEN:HBG061483 KO:K14000 ChiTaRS:RRBP1 EMBL:AF273683
EMBL:AF273684 EMBL:AF273685 EMBL:AF273686 EMBL:AF273687
EMBL:AF273688 EMBL:AF273689 EMBL:AF273690 EMBL:AF273691
EMBL:AF273692 EMBL:AF273693 EMBL:AL929550 EMBL:BC031452
EMBL:AK019964 IPI:IPI00121149 IPI:IPI00226199 IPI:IPI00226200
IPI:IPI00226201 IPI:IPI00230457 IPI:IPI00230458 IPI:IPI00230459
IPI:IPI00230462 IPI:IPI00230463 IPI:IPI00230464 IPI:IPI00230465
IPI:IPI00986807 RefSeq:NP_077243.2 RefSeq:NP_598329.1
UniGene:Mm.13705 ProteinModelPortal:Q99PL5 SMR:Q99PL5 STRING:Q99PL5
PhosphoSite:Q99PL5 PaxDb:Q99PL5 PRIDE:Q99PL5
Ensembl:ENSMUST00000037875 GeneID:81910 KEGG:mmu:81910
UCSC:uc008mqk.1 UCSC:uc008mql.1 UCSC:uc008mqm.1
GeneTree:ENSGT00530000063895 NextBio:350489 Bgee:Q99PL5
CleanEx:MM_RRBP1 Genevestigator:Q99PL5 Uniprot:Q99PL5
Length = 1605
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 45/170 (26%), Positives = 87/170 (51%)
Query: 73 NTRMNLFDRLARVVKSYANAILSSFEDPEKI----LEQAVLEMNDDLVKMRQATAQVLAS 128
NT++ + +++ N S E + L Q + ++N +LV+ +A+ Q
Sbjct: 995 NTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQ 1054
Query: 129 QKRLENKCKAAEQAS---EDWYRKAQLALQKGEEDLAREALKRRKSYAD-NANALKAQLD 184
+K LE K E+ + +++++ ALQK E++ RE + + S+A+ A+A KAQ
Sbjct: 1055 RKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQ 1114
Query: 185 QQK--NVVNNLVSNTRLLESKIQEARSKKDTLK-ARAQSAKFVFPLSLLE 231
QQ+ + + L S+ ++SK +E S LK ARA++++ + +E
Sbjct: 1115 QQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIE 1164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.127 0.344 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 241 0.00094 113 3 10 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 606 (64 KB)
Total size of DFA: 211 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.13u 0.16s 37.29t Elapsed: 00:00:02
Total cpu time: 37.13u 0.16s 37.29t Elapsed: 00:00:02
Start: Fri May 10 13:05:48 2013 End: Fri May 10 13:05:50 2013