Your job contains 1 sequence.
>025532
MDYRIDSNVNGELVGNSVDVGDRVGNEDEIYRTSVEVTLHQDQDNKVDPDSLALETIPEG
IPSVASVQADEPYVGQQFESEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVC
NKEGYRLPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGKGRKD
CIYDQYPNEHDKIRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLAKKIQHVVDSVK
NIEDEEQKSCT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025532
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 742 1.7e-73 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 372 2.8e-34 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 309 1.3e-27 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 303 5.7e-27 1
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 243 6.3e-25 2
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 180 9.7e-13 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 177 2.1e-12 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 166 5.5e-11 2
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 140 8.6e-07 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 138 1.7e-06 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 134 5.4e-06 1
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 124 5.9e-05 1
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 123 0.00010 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 119 0.00022 1
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 118 0.00039 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 115 0.00081 1
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 140/233 (60%), Positives = 175/233 (75%)
Query: 24 VGNEDEIYRTSVEVTLHQDQDNKVD--------PDSLALETIPEGIPSVASVQADEPYVG 75
V N +E+ +S + + QD DN + + + L++IP + + Q DEPYVG
Sbjct: 14 VENHNEMGESSGQAMIEQDDDNHNELGENSGEQDEKVDLDSIPLAVADMTEAQGDEPYVG 73
Query: 76 QQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDKREKIV 135
Q+FESE T+VGFVIRVSKLSRSR DGS IGR LVCNKEGYRLP KR+K++
Sbjct: 74 QEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRDKVI 133
Query: 136 RQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGKGRKDCIYDQYPNEHDKIRE 195
RQRAETRVGC+AMIL+RK NSG+WV+TKFVKEH H L PG+ R+ CIYDQYPNEHDKI+E
Sbjct: 134 RQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLMPGRVRRGCIYDQYPNEHDKIQE 193
Query: 196 LSQQLALEKKRAANYKRHLELIVEQIEEHNESLAKKIQHVVDSVKNIEDEEQK 248
L QQLA EKKRAA YKRHLE++ EQIE+HNESL+K+IQH+VD+V+N+E + +
Sbjct: 194 LMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLEQRDHQ 246
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 83/207 (40%), Positives = 126/207 (60%)
Query: 42 DQDNKVDPDSLALETIP-EGIPSVASVQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIR 100
++D ++ +S ++T+ E P V EP++G +FESE T +GFV+R
Sbjct: 8 EEDVEMMENSDVMKTVTDEASPMV------EPFIGMEFESEEAAKSFYDNYATCMGFVMR 61
Query: 101 VSKLSRSRRDGSAIGRALVCNKEGYRLPDKREKIVRQ-RAETRVGCRAMILVRKVNSGQW 159
V RS RDG+ + R LVCNKEG+R R R+ RA TR GC+A+I+V++ SG W
Sbjct: 62 VDAFRRSMRDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIVVKREKSGTW 121
Query: 160 VVTKFVKEHTHPLTP--GKGRKDCIYDQYPNEHD-KIRELSQQLALEKKRAANYKRHLEL 216
+VTKF KEH HPL P R++ Q P+E D KIRELS +L+ E++R ++ L++
Sbjct: 122 LVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERRRCTALQQQLDM 181
Query: 217 IVEQIEEHNESLAKKIQHVVDSVKNIE 243
+++++EEH+ L I V+ SV++IE
Sbjct: 182 VLKEMEEHSNHLTININSVIQSVRDIE 208
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 73/183 (39%), Positives = 104/183 (56%)
Query: 69 ADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGY--R 126
A EP G FESE R+GFV+RV RS +DG + R CNKEG+
Sbjct: 19 AIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVS 78
Query: 127 LPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPL--TPGKGRKDCIYD 184
+ K + + R TR GC+AMI V+ SG+WV+TKFVKEH HPL +P + R
Sbjct: 79 IRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTL--- 135
Query: 185 QYPNEHDK-IRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLAKKIQHVVDSVKNIE 243
+E DK I+EL+ +L +K+ A YK L+ + +EEH+ +AKK+++VV+++K E
Sbjct: 136 ---DEKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 192
Query: 244 DEE 246
E
Sbjct: 193 HLE 195
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 63/181 (34%), Positives = 105/181 (58%)
Query: 67 VQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYR 126
++ DEPYVG +FESE R+GFV+R+ + RS DG + R L CNK+G+
Sbjct: 5 LKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFG 64
Query: 127 LPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGKGRKDCIYDQY 186
++R + +R GC+A ILV+ SG+WVVT+F+KEH H L G YD +
Sbjct: 65 PNNQRSS--SSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQ-FIGSSS--YDSF 119
Query: 187 PNEHDKIRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLAKKIQHVVDSVKNIEDEE 246
++ KI+EL++++ + + Y+ L ++ +E + E L+ K++ +V++VK +E +
Sbjct: 120 ADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQI 179
Query: 247 Q 247
Q
Sbjct: 180 Q 180
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 243 (90.6 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 52/108 (48%), Positives = 66/108 (61%)
Query: 71 EPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYR-LPD 129
EPY G +FESE R+GF RVS RSRRDG+ I R VC KEG+R + +
Sbjct: 72 EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131
Query: 130 KREK---IVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
KR K I R R TRVGC+A + V+ +SG+W+V+ FVK+H H L P
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVP 179
Score = 77 (32.2 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 18/72 (25%), Positives = 43/72 (59%)
Query: 172 LTPGKGRKDCIYDQYP-NEHDK-IRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLA 229
+T GK +++ + P +E DK I +L +L L ++ Y+ +L +++++E+ ++
Sbjct: 715 VTGGKHQQEVLAQPEPEDEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVS 774
Query: 230 KKIQHVVDSVKN 241
K+Q++ S+K+
Sbjct: 775 IKVQNIKISLKD 786
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 180 (68.4 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 39/109 (35%), Positives = 58/109 (53%)
Query: 68 QADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRL 127
+A EPY G +F S VGF +R+ +L RS+ DGS R VC+KEG++
Sbjct: 186 KATEPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQH 245
Query: 128 PDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGK 176
P +R+GC A + +++ +SG W+V + K+H H L PGK
Sbjct: 246 P------------SRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGK 282
Score = 177 (67.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/128 (33%), Positives = 66/128 (51%)
Query: 52 LALETIPEGIPS----VASVQAD---EPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKL 104
+ ++T P G+ +A + D EPYVG +F++ TR GF +R +L
Sbjct: 1 MVVKTYPLGMVGTNNGIAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQL 60
Query: 105 SRSRRDGSAIGRALVCNKEGYRLPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKF 164
RSR DG+ R VC+KEG++L +R GC A I V++ ++G+WV+ +
Sbjct: 61 YRSRTDGTVSSRRFVCSKEGFQL------------NSRTGCPAFIRVQRRDTGKWVLDQI 108
Query: 165 VKEHTHPL 172
KEH H L
Sbjct: 109 QKEHNHDL 116
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 177 (67.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 66 SVQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGY 125
+V EPY G +F S VGF +R+ +L RS+ DGS R VC++EG+
Sbjct: 205 AVTGTEPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF 264
Query: 126 RLPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGKGRKDCIYDQ 185
+ P +R+GC A + +++ +SG W+V + K+H H L PGK + D +
Sbjct: 265 QHP------------SRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGK-KNDAGMKK 311
Query: 186 YPNE 189
P++
Sbjct: 312 IPDD 315
Score = 174 (66.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/107 (36%), Positives = 57/107 (53%)
Query: 71 EPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDK 130
EPYVG +F++ R GF +R +L RSR DG+ R VC+KEG++L
Sbjct: 42 EPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQL--- 98
Query: 131 REKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTPGKG 177
+R GC A I V++ ++G+WV+ + KEH H L G+G
Sbjct: 99 ---------NSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHELG-GEG 135
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 166 (63.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 43/152 (28%), Positives = 72/152 (47%)
Query: 23 RVGNEDEIYRTS--VEVTLHQDQDNKVDPDSLALETIPEGIPSVASVQADEPYVGQQFES 80
R+G E + + ++V Q+++ K + +++ G+ + D P VG +FES
Sbjct: 34 RIGEEALVCSSEHEIDVGFCQNEERKSEEETMGGFDEQSGLLVDERKEFDAPAVGMEFES 93
Query: 81 EXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDKREKIVRQRAE 140
+ VGF +RV RR G L C+ +G++ + + R R E
Sbjct: 94 YDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFK---RINDVNRVRKE 150
Query: 141 TRVGCRAMILVRKVNSGQWVVTKFVKEHTHPL 172
TR GC AMI +R+V+S +W V + +H H L
Sbjct: 151 TRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLL 182
Score = 42 (19.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 174 PGKGRKDCIYDQYPNEHDKIRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLAK 230
PG+ K +++Y ++ ++E L+K A K+H E + IE + A+
Sbjct: 468 PGETLKP-FFERYVHKQTPLKEF-----LDKYELALQKKHREETLSDIESQTLNTAE 518
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 140 (54.3 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 33/108 (30%), Positives = 47/108 (43%)
Query: 67 VQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYR 126
+ A P G +FES +GF IRV R G L CN +G++
Sbjct: 90 LMAPPPTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFK 149
Query: 127 LPDKREKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
L +R ETR GC+AMI +R ++ +W V + +H H P
Sbjct: 150 LLKDAHS---RRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFDP 194
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 75 GQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDKREKI 134
G FES+ VGF I + RS+R G I + C++ G KREK
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG----TKREKA 96
Query: 135 --VRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
+ R+ + GC+A + +++ +WV+ FVKEH H + P
Sbjct: 97 TAINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICP 138
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 134 (52.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 40/102 (39%), Positives = 50/102 (49%)
Query: 71 EPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDK 130
EP VG +F SE ++GF SKL R DGS R VC+ K
Sbjct: 48 EPCVGMEFNSEKEAKSFYDEYSRQLGFT---SKLL-PRTDGSVSVREFVCSSSS-----K 98
Query: 131 REKIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPL 172
R K R+ +E+ C AM+ + +WVVTKFVKEHTH L
Sbjct: 99 RSK--RRLSES---CDAMVRIELQGHEKWVVTKFVKEHTHGL 135
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 72 PYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDKR 131
PYVGQ F ++ + GF IR ++ + S+ G R VC + G+ P K+
Sbjct: 55 PYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKK 113
Query: 132 EKIV--RQRAETRVGCRAMI-LVRKVNSG--QWVVTKFVKEHTHPL 172
+ R+R R GC + L ++V G W V++F H H L
Sbjct: 114 ANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHEL 159
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 52/236 (22%), Positives = 94/236 (39%)
Query: 1 MDYRIDSNVNGELV-GNSVDVG-DRVGNEDEIYRTSVEVTLHQDQDNKVDPDSLALETIP 58
+D R+ S G+L G+ D G D V + +E +++ +D +V+ D +P
Sbjct: 3 IDLRLHS---GDLCKGDDEDRGLDNVLHNEE----DMDIGKIEDVSVEVNTDDSVGMGVP 55
Query: 59 EG-IPSVASVQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRA 117
G + EP G +FES +GF + RS+ I
Sbjct: 56 TGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAK 115
Query: 118 LVCNKEG--------YRLPDKR------EKIVRQRAETRVGCRAMILVRKVNSGQWVVTK 163
C++ G + P R E + +R + C+A + V++ G+WV+
Sbjct: 116 FACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHS 175
Query: 164 FVKEHTHPLTPGKGRKDCIYDQYPNEHDKIRELSQQLALEKKRAANYKRHLELIVE 219
FV+EH H L P + + Y + E ++L+ +++++ L VE
Sbjct: 176 FVREHNHELLPAQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVE 231
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 55/218 (25%), Positives = 93/218 (42%)
Query: 42 DQDNKVDPDSLALETIPEGIP-SVASVQADEPYVGQQFESEXXXXXXXXXXXTRVGFVIR 100
DQ + D+ + E P+ S+ +V PY+GQ F + R GF IR
Sbjct: 17 DQRSLSLDDASSTEESPDDNNLSLEAVHNAIPYLGQIFLTHDTAYEFYSTFAKRCGFSIR 76
Query: 101 VSKLSRSRRDGSAIGRA-LVCNKEGYRLPDK---REKIVRQRAETRVGCRAMILVRKVN- 155
+ G + R VC++ G P K K R R +R GC+A + + K+
Sbjct: 77 RHRTEGKDGVGKGLTRRYFVCHRAG-NTPIKTLSEGKPQRNRRSSRCGCQAYLRISKLTE 135
Query: 156 --SGQWVVTKFVKEHTHPLT-PGKGRKDCIYDQYPNEHDKIRELSQQLALEKKRAANYKR 212
S +W VT F H H L P + R Y ++ DK R L + K + ++
Sbjct: 136 LGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSI-SDADKSRIL-----MFSKTGISVQQ 189
Query: 213 HLELI-VEQIEEHN--ESLAKKIQHVVDSVKNIEDEEQ 247
+ L+ +E+ E K +++++ S K ++ E++
Sbjct: 190 MMRLLELEKCVEPGFLPFTEKDVRNLLQSFKKLDPEDE 227
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 118 (46.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 31/100 (31%), Positives = 46/100 (46%)
Query: 77 QFESEXXXXXXXXXXXTRVGFVIRVSKLS--RSRRDGSAIGRALVCNKEGYRLPDKREKI 134
+FE+ VGF +KLS RSR I C + G + + +
Sbjct: 2 EFETHEDAYLFYKDYAKSVGF--GTAKLSSRRSRASKEFIDAKFSCIRYGSK--QQSDDA 57
Query: 135 VRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
+ RA ++GC+A + V++ G+W V FVKEH H L P
Sbjct: 58 INPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLP 97
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 221 IEEHNESLAKKIQHVVDSVKNIE 243
++EHN L + H S +N E
Sbjct: 88 VKEHNHDLLPEQAHYFRSHRNTE 110
Score = 37 (18.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 187 PNEHDKIRELSQQLALEKKRAANYKRHLELIVEQIEEHNESLAKKIQHVVD 237
PN H + EK+ + N V Q E E + QHV D
Sbjct: 639 PNIHAGNVPWQAETRREKRSSLNNTSKKAKHVAQSETVGEGSQEGFQHVAD 689
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 26/106 (24%), Positives = 45/106 (42%)
Query: 71 EPYVGQQFESEXXXXXXXXXXXTRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDK 130
EP G F++ +GF + RS++ I C++ G P+
Sbjct: 50 EPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVT-PES 108
Query: 131 REKIVRQRAET--RVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
R T + C+A + V++ G+W++ +FVK+H H L P
Sbjct: 109 ESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLP 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 240 0.00093 113 3 11 23 0.49 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 592 (63 KB)
Total size of DFA: 180 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.75u 0.09s 25.84t Elapsed: 00:00:01
Total cpu time: 25.75u 0.09s 25.84t Elapsed: 00:00:01
Start: Fri May 10 13:18:23 2013 End: Fri May 10 13:18:24 2013