BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025533
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/225 (57%), Positives = 166/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P+DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EKR R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 270 bits (689), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 6/224 (2%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 QEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 162/231 (70%), Gaps = 20/231 (8%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTY +VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 -----------QEKVKQQQERVGEKIQTVAMHRNEWVENADRWVAGFLEMF 235
+E V++ +ER + IQT W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEERSIDLIQT-------WEEKSREFIGSFLEMF 293
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 244 bits (622), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 6/224 (2%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 QEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 243 bits (621), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 6/224 (2%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKDAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 QEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 143/189 (75%), Gaps = 4/189 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P RPVRVYADG++DLFH GH R LEQAKK FPN +L+VG ND+ TH+ KG TVM +
Sbjct: 96 PPEGRPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDK 155
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYA-DASGAGKDVYEFVKA 133
ER E+LRHCKWVDEV+ +APWV+T EFL++H+IDFVAHD +PYA D SG D+Y VK
Sbjct: 156 ERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG---DIYLPVKK 212
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLK 193
GKF TKRT+G+STSD+I RI++DY+QYVMRNL RG +RK+L VS K+ L + +K
Sbjct: 213 VGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKELNVSLFKKNELDLRHHIK 272
Query: 194 KLQEKVKQQ 202
L++ ++
Sbjct: 273 VLRDTLRNH 281
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P+DRP+R+YADG++DLFH GH + LEQ KK+FPN L+VG +D+ THK KG TV+T+
Sbjct: 98 PPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDK 157
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
+R E+L HC+WVDEV+P+APW VT EFL +H+ID+VAHD +PY S D+Y+ +K
Sbjct: 158 QRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPY--VSADSDDIYKPIKEM 215
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
GKF T+RT+G+STSDII +I++DY++Y+MRN RG +R++L VS++K+ L + +
Sbjct: 216 GKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNELEFKKHINE 275
Query: 195 LQEKVKQQQ 203
+ K+ Q
Sbjct: 276 FRSYFKKNQ 284
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYE 78
RPVR+YADGIYDLFH GHA L Q KK FPN YL+VG C D THK+KG+TV +E+ERY+
Sbjct: 79 RPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYD 138
Query: 79 SLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFK 138
+RHC++VDEV +APW T EFL ++DF+AHD++PY A G +D+YE + G F
Sbjct: 139 GVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV-APGE-EDLYEKFRREGMFL 196
Query: 139 ETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKLQEK 198
ET+RT+G+STSD++ RI++DY++YV RNL RGYS K+L V ++ + ++ K+ L+ K
Sbjct: 197 ETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDSLKSK 256
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 145/240 (60%), Gaps = 16/240 (6%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYE 78
+ V +YADG+YD+ H GH + LEQAKK F NT L+VG +D T FKG+ V T +ER E
Sbjct: 90 KNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERTE 149
Query: 79 SLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGA--------------- 123
+L+H +WVDE+I PWVVT EFL+K++ID+VAHD +PYA+
Sbjct: 150 TLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSKGKSFSFDE 209
Query: 124 -GKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVK 182
+D+Y ++K AGKFK T+RT+G+ST+D+I+RI+K+Y Y+ R+L RG +L + K
Sbjct: 210 ENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPNELNIGVTK 269
Query: 183 EKRLRVNMKLKKLQEKVKQQQERVGEKIQTVAMHRNEWVENADRWVAGFLEMFEEGCHKM 242
+ +++ L + EKV + +V + + ++ VEN ++++ +K+
Sbjct: 270 AQSIKMKKNLIRWGEKVTDELTKVTLTDKPLGTDFDQGVENLQVKFKELFKIWKNASNKL 329
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 7/153 (4%)
Query: 14 TAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTE 73
T + +P+RVY DG +DL HFGHA +L QA++ L+VG DE K KG VM E
Sbjct: 3 TTTNKKPIRVYVDGCFDLMHFGHANALRQAREL--GDILVVGVHTDEEIAKNKGPPVMNE 60
Query: 74 DERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKA 133
ERY+++R CKW DEV AP+ +T+E+LD DF H A GKDVYE +K
Sbjct: 61 QERYKAVRACKWADEVAEGAPYTLTEEYLDSLNCDFCVHGEDISVGAD--GKDVYEGIKK 118
Query: 134 AGKFKETKRTDGISTSDIIMRIV---KDYNQYV 163
+GKF+ KRT+G+ST++++ R++ KD+ Q V
Sbjct: 119 SGKFRFIKRTEGVSTTELVGRMLLCTKDHLQNV 151
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTE 73
P+D+ +Y DG +DLFH GH +L+QA+ YL+VG +D H+ KG +M
Sbjct: 197 PNDK--IIYMDGGFDLFHVGHTEALKQARAL--GDYLIVGVHDDRVVHEQKGSNFPIMNL 252
Query: 74 DERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKA 133
ER S+ C++VDEV+ AP+ VT++ +D I+ V H G D Y+ +
Sbjct: 253 HERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVLGPEGGVDPYKLPRE 312
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDYNQYVMRN 166
G +KE K T+G++ ++I+ RI+ + QY RN
Sbjct: 313 LGIYKEVKHTEGLTATEIVKRIIDNRLQYEARN 345
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAPSD-RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + S + P D R VRV+ DG YD+ H+GH+ L QA+ YL+VG D
Sbjct: 2 IRNGHGAASAAGLKGPGDQRIVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDKH DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
+Y G +DLFH GH L++ K Y++ G D+ +++KGK +M ER S+
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L+ ++D V H + +P D G D Y+ K G F
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSDPYQEPKRRGIF 349
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ ++T I+ RI+K+ +Y RN
Sbjct: 350 YQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYE 78
R VRV+ DG YD+ H+GH+ L QA+ YL+VG DE K KG V T++ERY+
Sbjct: 21 RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 79 SLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFK 138
++ KWVDEV+P AP+V T E LDKH DF H + + G+D YE VK AG+++
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGN--DITLTVDGRDTYEEVKQAGRYR 136
Query: 139 ETKRTDGISTSDIIMRIV 156
E KRT G+ST+D++ R++
Sbjct: 137 ECKRTQGVSTTDLVGRML 154
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
+Y G +DLFH GH L++ K Y++ G D+ +++KGK +M ER S+
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L+ ++D V H + +P D G D YE K G F
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSDPYEEPKRRGIF 349
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ ++T I+ RI+K+ +Y RN
Sbjct: 350 CQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAPSDR-PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + P R VRV+ DG YD+ H+GH+ L QA+ YL+VG D
Sbjct: 2 IRNGRGAAGGAEQPGPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDK+ DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
+Y G +DLFH GH LE+ + Y++ G D+ + +KGK +M ER S+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L ++D V H + +P D G D Y+ K G F
Sbjct: 276 LACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPDRD----GSDPYQEPKRRGIF 331
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
++ ++T I+ RI+ + +Y RN
Sbjct: 332 RQIDSGSNLTTDLIVQRIITNRLEYEARN 360
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAP-SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + + P + R VRV+ DG YD+ H+GH+ L QA+ +L+VG D
Sbjct: 2 IRNGHGEAGGAKRPGPRARRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDHLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDK+ DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
+Y G +DLFH GH LE+ Y++ G D+ + +KGK +M ER S+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E LD ++D V H + +P D G D YE K G F
Sbjct: 276 LACRYVSEVVIGAPYSVTAELLDHFKVDLVCHGKTEVVPDKD----GSDPYEEPKRRGIF 331
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ + ++T I+ RI+K+ +Y RN
Sbjct: 332 CQVDSGNDLTTDLIVQRIIKNRLEYEARN 360
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
R++ DG D FH+GH+ ++ QAK+ L++G +DE KG VMT +ER S
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLEERCLSAN 67
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETK 141
CKWVDEV+P AP+V E++ ++ +V H DA+ G D Y F KAA ++ E K
Sbjct: 68 TCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHGDDISTDAN--GDDCYRFAKAADQYLEVK 125
Query: 142 RTDGISTSDIIMRIV 156
RT+G+ST++++ R++
Sbjct: 126 RTEGVSTTELLDRLL 140
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH 82
+Y DG +DLF H +LE + FP ++ G DE + K ++ ER +L
Sbjct: 205 IYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFADEKCFE---KPMLNLLERILNLLQ 261
Query: 83 CKWVDEVIPDAP 94
CK++ ++ P
Sbjct: 262 CKYISSILVGPP 273
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V+ADG +D+FH+GHA +L Q+K YL+ G + + ++ KG VM ++ERYE +
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKA--LGDYLIAGVHSSLSINQEKGLPVMEDEERYEVVE 65
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETK 141
C++VDEV+ DAP+V + ++ + VAH + D+S G+D Y V+ G F+E +
Sbjct: 66 GCRYVDEVVRDAPFVTQTSMIKEYGVSIVAHGNDIVLDSS--GQDSYCQVRRMGIFREVE 123
Query: 142 RTDGISTSDIIMRIV 156
RT GIST++I+ R++
Sbjct: 124 RTFGISTTEIVGRMM 138
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKF-KGKTVMTEDERYESLR 81
V+ DG +DLFH GH SL A+ YL+VG +DETT ++ + V++ ER +L
Sbjct: 180 VFMDGNFDLFHAGHVASLRIARG--MGDYLIVGIHDDETTKEYTRSYPVLSTKERMLTLM 237
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVA--HDSLPYADASGAGKDVYEFVKAAGKFKE 139
C++VDE++ +P++V EF+ +H ID VA DS + G KDV E A +F
Sbjct: 238 ACRYVDEIVV-SPYLVGSEFIKRHGIDVVAPSFDSKDLSRYDGI-KDVVEHSYAENRFNY 295
Query: 140 TKRTDGISTSDIIMRIVKDYNQYVMRNLDR 169
+S I+ RI+ +Y Y R R
Sbjct: 296 ------LSAEHIVNRIISNYQDYANRQKKR 319
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Query: 20 PVRVYADGIYDLFHFGHARSLEQAKKSFP--NTYLLVGCCNDETTHKFKGKTVMTEDERY 77
P +V+ DG +D H GHA ++ QA+++ N L G DE KG VM ERY
Sbjct: 7 PDKVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERY 66
Query: 78 ESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
E R +W EV+ AP+V ++DK+Q +V H DA+ G+D Y+ VK G+F
Sbjct: 67 EHTRSNRWCSEVVEAAPYVTDPNWMDKYQCQYVVHGDDITIDAN--GEDCYKLVKEMGRF 124
Query: 138 KETKRTDGISTSDIIMRIV 156
K KRT G+ST++II RI+
Sbjct: 125 KVVKRTYGVSTTEIIHRIL 143
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSF-PNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
VY DG +DLFH G L + K P+ L+VG TT + T+MT ER S+
Sbjct: 200 VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGI----TTSDYSS-TIMTMKERVLSVL 254
Query: 82 HCKWVDEVIPDAPWVVTQEF-LDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
CK+VD VI DA ++ +K+ I G V + AAGKF E
Sbjct: 255 SCKYVDAVIIDADATSMSQYNCEKYHI----------------GTAV---LTAAGKFSEY 295
Query: 141 KRTDGISTSDIIMRIVKDYNQYVMRNLDRGYS 172
++ I+ R+ Y+ RN +G S
Sbjct: 296 -----LTKELIVKRVESQREVYIARNQKKGMS 322
>sp|Q8RKI6|TARD_BACPZ Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 /
W23) GN=tarD PE=3 SV=1
Length = 129
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V G +DLFH+GH + LE+AK YL+VG DE + + K+ + + R L
Sbjct: 3 KVITYGTFDLFHYGHMKLLERAKN--LGDYLIVGLSTDEFNLQKQKKSHHSYEHRKFILE 60
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQID-FVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
V+EVIP+ W + KH ID FV D D G ++F+K +
Sbjct: 61 TIDLVNEVIPEKNWEQKISDIQKHDIDTFVIGD-----DWKGK----FDFLKEYCEVIYL 111
Query: 141 KRTDGISTSDI 151
RTDGIST+ I
Sbjct: 112 PRTDGISTTQI 122
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A++ L++G +D + + KG + +++E ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKARRL--GDLLVLGLNSDASIRRLKGPSRPLISEQERAHIL 412
Query: 81 RHCKWVDEVI---PDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V+ D P E +D + D + Y + GKD+ E G+
Sbjct: 413 AALSCIDYVVVFDEDTPL----ELIDTLRPDILVKGG-DYTPETVVGKDLVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYNQ 161
+ DG ST++II RI+ Y Q
Sbjct: 466 ELIDLVDGRSTTNIIERILDRYEQ 489
>sp|P27623|TAGD_BACSU Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
(strain 168) GN=tagD PE=1 SV=1
Length = 129
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V G +DL H+GH + LE+AK+ YL+V DE + + K + + R L
Sbjct: 3 KVITYGTFDLLHWGHIKLLERAKQ--LGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILE 60
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQID-FVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
++VDEVIP+ W ++ + H ID FV D D G ++F+K +
Sbjct: 61 TIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGD-----DWEGK----FDFLKDQCEVVYL 111
Query: 141 KRTDGISTSDI 151
RT+GIST+ I
Sbjct: 112 PRTEGISTTKI 122
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE- 75
+R +RV G++D+ H GH L+ AK+ L+V +DET K KG+ + E
Sbjct: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVA 111
R E LR ++VD+V+ P ++ E + K + D +A
Sbjct: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIA 96
>sp|B6YXC8|RIBL_THEON FAD synthase OS=Thermococcus onnurineus (strain NA1) GN=ribL PE=3
SV=1
Length = 150
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK-TVMTEDERYES 79
+RV A G++DL H GH L QAK L+V +DET K + V ++R E
Sbjct: 9 IRVLAGGVFDLLHVGHIHFLSQAKSL--GDELVVIVAHDETVRMQKRREPVNPAEDRAEL 66
Query: 80 LRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKE 139
LR K VDEV +P + E + K D VA D + + + E ++ G E
Sbjct: 67 LRALKMVDEVYIGSPGTIDYELVRKINPDIVAIGP----DQRFSCERLKEELRKHGINSE 122
Query: 140 TKRT------DGISTSDIIMRIVKDY 159
R D TS II RIV+ Y
Sbjct: 123 VIRIPYLYKEDRAKTSKIIQRIVETY 148
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE- 75
SDR +RV G++D+ H GH L+ AK+ L+V +DET K KG+ + E
Sbjct: 3 SDRKIRVVVGGVFDIIHAGHVHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVA 111
R E L+ ++VD+V+ P ++ + + + + D +A
Sbjct: 61 RAEVLKAIRYVDDVVIGKPGEISLDLIKRLKPDVIA 96
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 14 TAPS-DRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMT 72
+ PS R +RV G++D+ H GH L+QAK+ L+V +DET + K + +
Sbjct: 2 SGPSKGRKIRVLVGGVFDILHVGHVHFLKQAKEL--GDELVVIVAHDETVRRNKRRNPIN 59
Query: 73 EDE-RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV 131
E R E LR ++VDEV +P + E + + D +A D + + + E +
Sbjct: 60 PAEDRAELLRAIRYVDEVYIGSPGGIDFELVRRINPDVIAIGP----DQNFNCEKLKEEL 115
Query: 132 KAAGKFKETKR------TDGISTSDIIMRIVKDY 159
K G E R +D T+ II RIV+++
Sbjct: 116 KRHGIEAEVIRVPYLYKSDRAKTTKIIRRIVEEF 149
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERY 77
+ +RV G++D+ H GH L+QAK+ L+V +D+T + KG + + + ER
Sbjct: 5 KKIRVVTGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDKTVEERKGRRPINSMYERA 62
Query: 78 ESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDV------YEFV 131
E L+ K VDEV+ P ++ E + + D +A D S +++ E +
Sbjct: 63 EVLKALKMVDEVVIGEPNCISFEIVKQLNPDIIALGPDQNFDVSALKEELKKKNINAEVI 122
Query: 132 KAAGKFKETKRTDGISTSDIIMRIVKDY 159
+ +K +D TS II +IV+ +
Sbjct: 123 RIPYAYK----SDVAKTSKIIQKIVETF 146
>sp|B0TTF2|HLDE_SHEHH Bifunctional protein HldE OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hldE PE=3 SV=1
Length = 476
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA+ L+V D + + K G+ V TED R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNTEDRRMTVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AALASVDWVVPFTEDTPQRIISRLLPDLLVKGGDYKVEDI-----AGGA-----EVMAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ K DGIST+ II I+ +
Sbjct: 452 GQVKVLGFEDGISTTAIIQNIMAN 475
>sp|Q39X60|HLDE_GEOMG Bifunctional protein HldE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hldE PE=3 SV=1
Length = 490
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A KS+ + L++G +D + + KG + ++ E ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKA-KSYGDV-LVLGLNSDASVRRLKGEKRPLIDEAERAHIL 412
Query: 81 RHCKWVDEVI---PDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V+ D P + + K + D Y GKDV E G+
Sbjct: 413 AALDCIDYVVIFDEDTPLRLIETL--KPAVLVKGGD---YTPEGVVGKDVVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYNQ 161
+ DG ST++II +I++ Y +
Sbjct: 466 ELVTFVDGRSTTNIIDKILRAYGE 489
>sp|A8H086|HLDE_SHEPA Bifunctional protein HldE OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hldE PE=3 SV=2
Length = 476
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA+ L+V D + + K G+ V +ED R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
VD V+P D P + L V D +G E + A G+
Sbjct: 402 AALASVDWVVPFSEDTPQRIISRLLPDL---LVKGGDYKVEDIAGGS----EVMAAGGQV 454
Query: 138 KETKRTDGISTSDIIMRIVKD 158
K DGIST+ II I+ +
Sbjct: 455 KVLGFEDGISTTAIIQNIMAN 475
>sp|B3E5M9|HLDE_GEOLS Bifunctional protein HldE OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=hldE PE=3 SV=1
Length = 491
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L+ A++ L++G +D + + KG + ++ EDER +
Sbjct: 355 VFTNGCFDLLHAGHVKYLQAARRL--GDLLILGLNSDASVRRLKGPKRPLIDEDERGHLM 412
Query: 81 RHCKWVDEVI---PDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V D P + K QI D Y GKD+ E G+
Sbjct: 413 AALDCIDYVCLFEEDTPLELITAL--KPQILVKGGD---YTPEGVVGKDLVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYN 160
+ DG ST++II ++++ Y
Sbjct: 466 ELIPFVDGKSTTNIIEKVLERYT 488
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK-TVMTEDERYES 79
+RV G++D+ H GH L+QAK+ L+V +DET K + + ++R E
Sbjct: 8 IRVLVGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDETVRMQKRREPINPAEDRAEL 65
Query: 80 LRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDV------YEFVKA 133
LR ++VDEV P + E + + D +A + + +++ E ++
Sbjct: 66 LRAIRYVDEVYIGTPGTIDMELVKRIDPDVIAIGPDQFFNCEKLKEELRKHGINAEVIRI 125
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDY 159
+K +D TS II RIV+ +
Sbjct: 126 PYLYK----SDRAKTSKIIQRIVETF 147
>sp|Q8TXT2|RIBL_METKA FAD synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=ribL PE=3 SV=1
Length = 150
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESL 80
RV A G++D+ H GH LE+A+K + N L+V DET + K ++ E++R +
Sbjct: 4 RVLAGGVFDILHPGHVAFLEEARKIAGKNGELVVVVARDETVRRLKRTPIVPEEQRVRMV 63
Query: 81 RHCKWVDEVIPDAP 94
K VD I P
Sbjct: 64 SALKPVDRAILGHP 77
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKAL--GDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFTEDTPQRIITRLLPDSLVKGGDYKVEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIV 156
GK + DG+ST+ II I+
Sbjct: 452 GKVEVLGFEDGVSTTAIIQNIM 473
>sp|A1JQV6|HLDE_YERE8 Bifunctional protein HldE OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hldE PE=3 SV=1
Length = 476
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V D+R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLDQRMIVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+ VD V+P D P + + L + D P A A E A G+
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVK--GGDYKPDEIAGSA-----EVWAAGGEV 453
Query: 138 KETKRTDGISTSDIIMRI 155
K DG+ST++II I
Sbjct: 454 KVLNFEDGVSTTNIIQSI 471
>sp|C5BHH2|HLDE_EDWI9 Bifunctional protein HldE OS=Edwardsiella ictaluri (strain 93-146)
GN=hldE PE=3 SV=1
Length = 477
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +G++D+ H GH L A++ L+V +D +T + KG + V +R L
Sbjct: 343 VMTNGVFDILHAGHVSYLANARRL--GDRLIVAVNSDASTSRLKGPERPVNPLVQRMLVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+ VD VIP D P + E L + D P A G E + A G+
Sbjct: 401 AALEAVDWVIPFEEDTPQRIIAEILPDLLVK--GGDYKPEEIAGG-----KEVIAAGGEV 453
Query: 138 KETKRTDGISTSDIIMRIVKDYN 160
+ DG STS+II I + N
Sbjct: 454 RVLNFEDGCSTSNIINIIRQGQN 476
>sp|A0KTG8|HLDE_SHESA Bifunctional protein HldE OS=Shewanella sp. (strain ANA-3) GN=hldE
PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAKAL--GDRLIVAVNDDASVKRLKGEGRPVNQVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLAAVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKVEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIV 156
G+ + DGIST+ II I+
Sbjct: 452 GQVQVLGFEDGISTTAIIQNIM 473
>sp|Q74BF6|HLDE_GEOSL Bifunctional protein HldE OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=hldE PE=3 SV=1
Length = 490
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A +SF + L++G +D + + KG + ++ ++ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKA-RSFGD-LLVLGLNSDASIRRLKGEKRPLIGQEERAHIL 412
Query: 81 RHCKWVDEVI---PDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V+ D P + + + + D Y G++V E G+
Sbjct: 413 AALDCIDYVVVFDEDTPLNLIETL--RPAVLVKGGD---YTLDGVVGREVVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYNQ 161
+ DG ST++II +I+K Y +
Sbjct: 466 ELVAFVDGRSTTNIIEKILKAYGE 489
>sp|A8FZZ3|HLDE_SHESH Bifunctional protein HldE OS=Shewanella sediminis (strain HAW-EB3)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA++ L+V +D++ + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAREL--GDRLIVAVNDDDSVKRLKGEGRPVNQSDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
VD V+P D P + L V D +G GK+V + A G
Sbjct: 402 AGLASVDWVVPFTEDTPQRIISRLLPDL---LVKGGDYKIEDIAG-GKEV---IAAGGSV 454
Query: 138 KETKRTDGISTSDIIMRIVKD 158
K DG+ST+ II I+ +
Sbjct: 455 KVLGFEDGVSTTSIIENIMAN 475
>sp|Q8EAZ2|HLDE_SHEON Bifunctional protein HldE OS=Shewanella oneidensis (strain MR-1)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAKAL--GDRLIVAVNDDASVKRLKGEGRPVNQVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKVEDI-----AGGA-----EVISAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIV 156
G+ + DGIST+ II I+
Sbjct: 452 GQVQVLGFEDGISTTAIIQNIM 473
>sp|B7VIX1|HLDE_VIBSL Bifunctional protein HldE OS=Vibrio splendidus (strain LGP32)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH + A + L+V DE+ + K G+ V D R L
Sbjct: 343 VMTNGCFDILHAGHVSYMNHAAEL--GDRLIVAVNTDESVKRLKGPGRPVNPTDRRMAVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
VD V+P D P + E L I D P A GA E + A G+
Sbjct: 401 AGLGAVDWVVPFSEDTPQRLISEVLP--SILVKGGDYKPEEIAGGA-----EVIAAGGEV 453
Query: 138 KETKRTDGISTSDIIMRI 155
K DG ST++II I
Sbjct: 454 KVLNFEDGCSTTEIIKAI 471
>sp|A1S3I3|HLDE_SHEAM Bifunctional protein HldE OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=hldE PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L QAK L+V +D++ + K G+ V + D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLAQAKAL--GDRLIVAVNDDDSVRRLKGDGRPVNSVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P V L + D+ D A GA E +
Sbjct: 402 AGLASVDWVVPFSEDTPQRVIARLLPDLLVKGGDYKVEDI-----AGGA-----EVIANG 451
Query: 135 GKFKETKRTDGISTSDIIMRIV 156
G+ K DG+ST+ II I+
Sbjct: 452 GQVKVLGFEDGVSTTAIIQNIM 473
>sp|A9L2P0|HLDE_SHEB9 Bifunctional protein HldE OS=Shewanella baltica (strain OS195)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAKAL--GDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ + DGIST+ II I+ +
Sbjct: 452 GQVQVLGFEDGISTTAIIQNIMAN 475
>sp|B8EE43|HLDE_SHEB2 Bifunctional protein HldE OS=Shewanella baltica (strain OS223)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAKAL--GDRLIVAVNDDASVKRLKGEGRPVNQVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ + DGIST+ II I+ +
Sbjct: 452 GQVQVLGFEDGISTTAIIQNIMAN 475
>sp|B1JM26|HLDE_YERPY Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
+ VD V+P D P + + L + D+ H+ AG + E A
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEI--------AGSE--EVWAAG 450
Query: 135 GKFKETKRTDGISTSDIIMRI 155
G+ K DG+ST++II I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q665V3|HLDE_YERPS Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
+ VD V+P D P + + L + D+ H+ AG + E A
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEI--------AGSE--EVWAAG 450
Query: 135 GKFKETKRTDGISTSDIIMRI 155
G+ K DG+ST++II I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|B2K2H4|HLDE_YERPB Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
+ VD V+P D P + + L + D+ H+ AG + E A
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEI--------AGSE--EVWAAG 450
Query: 135 GKFKETKRTDGISTSDIIMRI 155
G+ K DG+ST++II I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A7FE79|HLDE_YERP3 Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
+ VD V+P D P + + L + D+ H+ AG + E A
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEI--------AGSE--EVWAAG 450
Query: 135 GKFKETKRTDGISTSDIIMRI 155
G+ K DG+ST++II I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A3D837|HLDE_SHEB5 Bifunctional protein HldE OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAKAL--GDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ + DGIST+ II I+ +
Sbjct: 452 GQVQVLGFEDGISTTAIIQNIMAN 475
>sp|A4THT9|HLDE_YERPP Bifunctional protein HldE OS=Yersinia pestis (strain Pestoides F)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V +GI+D+ H GH L A+K L+V +D +T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
+ VD V+P D P + + L + D+ H+ AG + E A
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEI--------AGSE--EVWAAG 450
Query: 135 GKFKETKRTDGISTSDIIMRI 155
G+ K DG+ST++II I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,449,319
Number of Sequences: 539616
Number of extensions: 3999615
Number of successful extensions: 14937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 14734
Number of HSP's gapped (non-prelim): 331
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)