Query 025533
Match_columns 251
No_of_seqs 307 out of 1910
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 12:17:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hl4_A Choline-phosphate cytid 100.0 1.2E-46 4E-51 334.2 14.2 167 14-182 70-236 (236)
2 3elb_A Ethanolamine-phosphate 100.0 1.1E-32 3.9E-37 256.3 13.7 148 14-162 192-341 (341)
3 3elb_A Ethanolamine-phosphate 100.0 4.7E-32 1.6E-36 252.3 14.3 141 16-160 3-143 (341)
4 2b7l_A Glycerol-3-phosphate cy 99.9 4.9E-25 1.7E-29 176.9 9.5 129 20-159 1-130 (132)
5 1coz_A Protein (glycerol-3-pho 99.9 8E-25 2.8E-29 174.7 8.9 126 20-156 1-127 (129)
6 3glv_A Lipopolysaccharide core 99.9 2.4E-24 8.2E-29 176.4 11.3 134 20-160 2-140 (143)
7 3nv7_A Phosphopantetheine aden 99.8 2.2E-20 7.4E-25 156.4 8.9 132 20-159 2-140 (157)
8 4f3r_A Phosphopantetheine aden 99.8 9.3E-20 3.2E-24 153.1 11.1 131 20-159 5-142 (162)
9 3k9w_A Phosphopantetheine aden 99.8 4E-19 1.4E-23 152.6 12.4 133 19-159 21-160 (187)
10 3op1_A Macrolide-efflux protei 99.8 4.4E-19 1.5E-23 163.0 11.7 147 22-172 22-191 (308)
11 1mrz_A Riboflavin kinase/FMN a 99.8 2.5E-19 8.7E-24 163.4 8.1 147 22-172 1-161 (293)
12 3nbk_A Phosphopantetheine aden 99.8 3.9E-18 1.3E-22 145.5 13.4 135 15-158 16-157 (177)
13 1qjc_A Phosphopantetheine aden 99.8 2.8E-18 9.6E-23 140.5 11.9 130 20-158 1-138 (158)
14 3f3m_A Phosphopantetheine aden 99.8 4.4E-18 1.5E-22 143.7 12.8 131 20-159 3-141 (168)
15 3nd5_A Phosphopantetheine aden 99.7 8E-18 2.7E-22 142.5 12.0 131 20-159 2-141 (171)
16 2x0k_A Riboflavin biosynthesis 99.7 4.1E-18 1.4E-22 158.2 10.8 147 22-171 17-187 (338)
17 1vlh_A Phosphopantetheine aden 99.7 2.7E-17 9.3E-22 138.6 11.4 127 21-158 13-149 (173)
18 1o6b_A Phosphopantetheine aden 99.7 4.1E-17 1.4E-21 135.7 11.5 129 20-158 2-139 (169)
19 1od6_A PPAT, phosphopantethein 99.7 1.5E-16 5.1E-21 130.6 12.7 128 20-158 1-139 (160)
20 2qtr_A Nicotinate (nicotinamid 99.7 3.6E-17 1.2E-21 137.7 8.8 134 21-159 3-167 (189)
21 1kam_A Deamido-NAD(+), nicotin 99.7 7.2E-16 2.4E-20 131.1 13.8 134 21-159 8-172 (194)
22 3do8_A Phosphopantetheine aden 99.6 1.6E-16 5.3E-21 131.5 3.5 127 22-158 2-143 (148)
23 1k4m_A NAMN adenylyltransferas 99.6 7.1E-15 2.4E-19 126.8 11.4 92 22-116 4-110 (213)
24 1yum_A 'probable nicotinate-nu 99.6 5.5E-14 1.9E-18 124.4 15.6 93 20-115 23-129 (242)
25 3h05_A Uncharacterized protein 99.5 1.1E-14 3.7E-19 123.7 8.5 130 20-158 2-149 (177)
26 2h29_A Probable nicotinate-nuc 99.5 4E-14 1.4E-18 119.8 10.3 133 21-158 3-166 (189)
27 1ej2_A Nicotinamide mononucleo 99.5 9.9E-14 3.4E-18 116.9 12.1 124 21-159 4-143 (181)
28 1f9a_A Hypothetical protein MJ 99.5 5.7E-13 2E-17 111.0 14.1 122 22-159 2-137 (168)
29 2qjo_A Bifunctional NMN adenyl 99.5 1.2E-13 4.1E-18 124.7 10.5 128 20-159 7-152 (341)
30 1lw7_A Transcriptional regulat 99.4 1.1E-12 3.9E-17 120.7 13.0 125 20-155 2-154 (365)
31 1nup_A FKSG76; NAD biosynthesi 99.4 1.7E-12 5.9E-17 115.2 9.5 71 19-89 5-78 (252)
32 1kqn_A Nmnat, nicotinamide mon 99.3 1.8E-12 6.2E-17 117.1 8.7 72 19-91 7-82 (279)
33 2qjt_B Nicotinamide-nucleotide 99.3 1.3E-11 4.6E-16 112.1 10.8 59 20-82 7-65 (352)
34 3gmi_A UPF0348 protein MJ0951; 99.2 7E-11 2.4E-15 110.4 12.4 145 20-171 52-264 (357)
35 2ejc_A Pantoate--beta-alanine 98.9 1.4E-09 4.9E-14 98.5 6.6 66 23-92 24-93 (280)
36 1jhd_A Sulfate adenylyltransfe 98.2 1.1E-05 3.9E-10 76.2 11.8 92 21-117 193-299 (396)
37 3ag6_A Pantothenate synthetase 98.0 3.9E-06 1.3E-10 76.1 4.8 119 23-151 28-190 (283)
38 1v47_A ATP sulfurylase; produc 97.9 0.00018 6.2E-09 66.8 13.8 90 21-117 156-260 (349)
39 1v8f_A Pantoate-beta-alanine l 97.7 0.00013 4.3E-09 66.0 8.8 63 21-91 20-87 (276)
40 1pei_A PEPC22; transferase, nu 97.3 5.6E-05 1.9E-09 44.6 0.7 18 216-233 9-26 (26)
41 3cov_A Pantothenate synthetase 97.1 0.0012 4.2E-08 60.2 7.7 61 26-91 38-104 (301)
42 3uk2_A Pantothenate synthetase 96.8 0.0024 8.2E-08 57.8 6.9 64 23-91 24-92 (283)
43 3inn_A Pantothenate synthetase 96.3 0.014 4.6E-07 53.6 8.8 65 21-91 44-113 (314)
44 3q12_A Pantoate--beta-alanine 96.3 0.0072 2.4E-07 54.8 6.6 63 21-91 26-95 (287)
45 3mxt_A Pantothenate synthetase 95.0 0.046 1.6E-06 49.4 6.9 57 31-91 35-94 (285)
46 1r6x_A ATP:sulfate adenylyltra 94.9 0.62 2.1E-05 43.8 14.6 90 21-116 188-291 (395)
47 1g8f_A Sulfate adenylyltransfe 94.8 0.54 1.8E-05 45.5 14.4 89 21-116 189-292 (511)
48 1peh_A Pepnh1; transferase, nu 94.2 0.00045 1.5E-08 43.0 -5.8 34 181-214 1-34 (35)
49 3n8h_A Pantothenate synthetase 94.1 0.12 4E-06 46.3 7.3 64 22-91 26-94 (264)
50 2gks_A Bifunctional SAT/APS ki 93.8 0.055 1.9E-06 52.6 5.0 88 21-115 164-267 (546)
51 1m8p_A Sulfate adenylyltransfe 92.1 0.2 7E-06 48.9 6.2 89 21-115 191-293 (573)
52 3viq_A SWI5-dependent recombin 88.1 2.9 9.8E-05 33.1 8.6 65 180-244 4-72 (122)
53 3cr8_A Sulfate adenylyltranfer 84.8 7.1 0.00024 37.9 11.3 89 21-115 164-266 (552)
54 1lyp_A CAP18; lipopolysacchari 74.0 5 0.00017 23.9 3.9 24 189-212 3-26 (32)
55 1x6v_B Bifunctional 3'-phospho 64.9 22 0.00077 35.1 8.8 91 21-116 413-524 (630)
56 3rc1_A Sugar 3-ketoreductase; 61.5 68 0.0023 28.3 10.7 25 4-28 11-35 (350)
57 3c8z_A Cysteinyl-tRNA syntheta 38.8 43 0.0015 30.8 5.6 39 18-57 37-85 (414)
58 3m91_B Prokaryotic ubiquitin-l 36.7 46 0.0016 21.7 3.8 16 219-234 26-41 (44)
59 3tqo_A Cysteinyl-tRNA syntheta 35.2 21 0.0007 34.0 2.8 39 18-57 23-69 (462)
60 1deq_A Fibrinogen (alpha chain 32.8 89 0.003 29.2 6.6 43 179-221 56-98 (390)
61 1li5_A Cysrs, cysteinyl-tRNA s 32.8 23 0.00078 33.4 2.7 21 18-38 20-42 (461)
62 4fqn_A Malcavernin; helical do 28.1 49 0.0017 25.1 3.3 40 208-247 32-73 (98)
63 4dlp_A Aminoacyl-tRNA syntheta 26.3 1.1E+02 0.0036 29.0 6.2 41 19-60 24-73 (536)
64 3bs7_A Protein aveugle; sterIl 24.4 1E+02 0.0035 21.1 4.4 28 146-173 6-36 (78)
65 2akf_A Coronin-1A; coiled coil 23.1 1.3E+02 0.0044 18.0 4.1 27 179-205 2-28 (32)
66 3l9k_W Dynein intermediate cha 22.5 8.2 0.00028 24.5 -1.6 22 230-251 14-35 (38)
67 3h99_A Methionyl-tRNA syntheta 21.7 48 0.0016 31.6 2.8 41 18-59 16-65 (560)
68 1yi8_B Tryptophanyl-tRNA synth 21.3 98 0.0033 28.0 4.7 39 18-58 20-62 (351)
69 2wfb_A Putative uncharacterize 20.4 1.8E+02 0.0063 21.4 5.4 51 99-158 60-110 (120)
70 4fo5_A Thioredoxin-like protei 20.3 95 0.0033 22.7 3.7 44 17-60 31-75 (143)
71 3mq7_A Bone marrow stromal ant 20.2 2.3E+02 0.008 22.1 5.9 44 175-219 57-100 (121)
No 1
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-46 Score=334.23 Aligned_cols=167 Identities=62% Similarity=1.126 Sum_probs=137.6
Q ss_pred CCCCCCCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhccCccccccCC
Q 025533 14 TAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDA 93 (251)
Q Consensus 14 ~~~~~r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k~VD~Vi~~~ 93 (251)
+.+..+|++||++|+|||||.||+.+|++|+++|++|+|||||++|+.+++.||+|+++.+||+++|++|+|||+|++++
T Consensus 70 ~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~ 149 (236)
T 3hl4_A 70 GTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNA 149 (236)
T ss_dssp CCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSC
T ss_pred CCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECC
Confidence 45668999999999999999999999999999998899999999999888788889999999999999999999999999
Q ss_pred CccchHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHhhHHHHHHHhhcCCCc
Q 025533 94 PWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSR 173 (251)
Q Consensus 94 p~~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~~~~y~~r~l~rg~~~ 173 (251)
||.++.+++++++||+|++|++++.+. .++|.|+.++++|++.+++||+++|||+|++||+++|+.|++||++|||++
T Consensus 150 p~~l~~d~i~~~~~d~Vv~GDd~~~~~--~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~~~ 227 (236)
T 3hl4_A 150 PWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTA 227 (236)
T ss_dssp CSSCCHHHHHHTTCCEEEEESSCCCCS--SCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC------------
T ss_pred cCcCcHHHHHHcCCCEEEECCccccCC--CchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCCCH
Confidence 999999999999999999999988764 356789999999999999999999999999999999999999999999999
Q ss_pred cccCchhHH
Q 025533 174 KDLGVSYVK 182 (251)
Q Consensus 174 ~~l~~~~~~ 182 (251)
+||||||++
T Consensus 228 ~~~~~~~~~ 236 (236)
T 3hl4_A 228 KELNVSFIN 236 (236)
T ss_dssp ---------
T ss_pred HHhCCcccC
Confidence 999999985
No 2
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.98 E-value=1.1e-32 Score=256.34 Aligned_cols=148 Identities=30% Similarity=0.556 Sum_probs=129.7
Q ss_pred CCCCCCCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC--CCCCCHHHHHHHHhhccCcccccc
Q 025533 14 TAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 14 ~~~~~r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg--~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
..|.+..++||++|+|||||.||+++|++|+++|++.+|||||++|+.+++.|| +|+++++||+++|++|++||+|++
T Consensus 192 ~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v 271 (341)
T 3elb_A 192 KEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVI 271 (341)
T ss_dssp CCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEEE
T ss_pred CCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEEE
Confidence 345566789999999999999999999999999822299999999998888887 599999999999999999999999
Q ss_pred CCCccchHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHhhHHH
Q 025533 92 DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQY 162 (251)
Q Consensus 92 ~~p~~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~~~~y 162 (251)
++||.++.+++++++||++++|.++... ...|.|.|+..+..|+|..+++++++|||+|++||++++..|
T Consensus 272 ~~~~~l~~~~~~~~~~~~iv~G~d~~~~-~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 272 GAPYAVTAELLSHFKVDLVCHGKTEIIP-DRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp EECSSCCHHHHHHTTCSEEEECSSCCCC-CTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-----
T ss_pred CCCCcchHHHHHhcCCcEEEECCCCccc-cCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999987653 235678899999999999999999999999999999999876
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.7e-32 Score=252.25 Aligned_cols=141 Identities=45% Similarity=0.748 Sum_probs=128.4
Q ss_pred CCCCCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhccCccccccCCCc
Q 025533 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPW 95 (251)
Q Consensus 16 ~~~r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k~VD~Vi~~~p~ 95 (251)
...+|++|+++|+||+||.||+.+|++|+++| ++|+|||++|+.+.+.|++|+++.+||+++|++|+|||+|++.+||
T Consensus 3 ~~~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~--d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~ 80 (341)
T 3elb_A 3 GGRRAVRVWCDGCYDMVHYGHSNQLRQARAMG--DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPY 80 (341)
T ss_dssp -CCCCCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCS
T ss_pred CCCCceEEEEEeeCCCCCHHHHHHHHHHHHhC--CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCC
Confidence 34789999999999999999999999999997 8999999999987777888999999999999999999999998888
Q ss_pred cchHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHhhH
Q 025533 96 VVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYN 160 (251)
Q Consensus 96 ~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~~~ 160 (251)
..+.+|+++++||++++|+|+.++. .+.|.|+.+++.|+++.++||+++|||+|++||+..+.
T Consensus 81 ~~~~efi~~~~~d~vV~G~D~~~g~--~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~ 143 (341)
T 3elb_A 81 VTTLETLDKYNCDFCVHGNDITLTV--DGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTK 143 (341)
T ss_dssp SCCHHHHHHTTCSEEEECSCCCBCT--TSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC---
T ss_pred CCHHHHHHHhCCCEEEECCCCCCCC--CCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhcc
Confidence 8789999999999999999999875 46688999999999999999999999999999998654
No 4
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.92 E-value=4.9e-25 Score=176.88 Aligned_cols=129 Identities=29% Similarity=0.439 Sum_probs=96.1
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-CCCCCHHHHHHHHhhccCccccccCCCccch
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLRHCKWVDEVIPDAPWVVT 98 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-~pv~s~~ER~e~l~~~k~VD~Vi~~~p~~it 98 (251)
|+++++.|+|||+|.||+.++++|++.+ +.++|+|++|+... .++ .|+++.+||++++++++++|.|++..+|..+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--~~~~v~v~~~~~~~-~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~ 77 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQ-IKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQK 77 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEECHHHHH-HTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGGH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC--CcEEEEEECCHHHh-ccCCCCCCCHHHHHHHHHhcCCCCEEEECCChHHH
Confidence 5689999999999999999999999997 67999999998432 233 4799999999999999999999886667666
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHhh
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDY 159 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~~ 159 (251)
.+.+++++++++++|.|+.. .++.|++.|+++.++++..+|||.||++|.++.
T Consensus 78 ~~~~~~~~~~~iv~G~D~~~--------~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g~ 130 (132)
T 2b7l_A 78 EDDVEKFDVDVFVMGHDWEG--------EFDFLKDKCEVIYLKRTEGISTTKIKQELYGKD 130 (132)
T ss_dssp HHHHHHTTCCEEEECGGGTT--------TTGGGTTTSEEEECSSCC---------------
T ss_pred HHHHHHcCCCEEEECCCCcC--------cHHHHHhCCEEEEECCCCCcCHHHHHHHHHhcC
Confidence 77789999999999997632 134577889999999999999999999998764
No 5
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.91 E-value=8e-25 Score=174.73 Aligned_cols=126 Identities=32% Similarity=0.444 Sum_probs=106.4
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-CCCCCHHHHHHHHhhccCccccccCCCccch
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLRHCKWVDEVIPDAPWVVT 98 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-~pv~s~~ER~e~l~~~k~VD~Vi~~~p~~it 98 (251)
|+++++.|+|||+|.||+.++++|++.+ +.++|++++|+... .|+ .++++.+||++++++|+++|.|++..+|..+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--d~~~v~v~~~~~~~-~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~ 77 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNL-QKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQK 77 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHH-HHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHh-cCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHHHH
Confidence 5689999999999999999999999997 78999999997321 233 5799999999999999999998876677666
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHH
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~ 156 (251)
.+.+++++++++++|.|+.. .++.|++.|+++.++++..+|||.||++|.
T Consensus 78 ~~~l~~~~~~~iv~G~D~~~--------~~~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 78 KQDIIDHNIDVFVMGDDWEG--------KFDFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHHHHHTTCSEEEEEGGGTT--------TTGGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHHHHHhCCcEEEECCCCCC--------cHHHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 77788999999999997632 134577789999999999999999999875
No 6
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.91 E-value=2.4e-24 Score=176.42 Aligned_cols=134 Identities=21% Similarity=0.248 Sum_probs=93.3
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhccCccccccCCCccchH
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQ 99 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k~VD~Vi~~~p~~it~ 99 (251)
|++|++.|+|||+|.||+.+|++|++++ +.++|+|++|+.+.+.+.++++|.+||+++++.+++||.|++..|... .
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~~f-~ 78 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLG--DELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEGDM-M 78 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTTCH-H
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhC--CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCchhH-H
Confidence 7899999999999999999999999996 679999999998765223579999999999999999999998777663 4
Q ss_pred HHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcC---eEEEcCc--cCCCChHHHHHHHHHhhH
Q 025533 100 EFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG---KFKETKR--TDGISTSDIIMRIVKDYN 160 (251)
Q Consensus 100 ~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G---~~~~~~r--t~giSTT~Ii~rI~~~~~ 160 (251)
+++++++++++++|.|+.++. ++..+..++.| .++.... +..+|||.||+.|.+.|.
T Consensus 79 ~~~~~l~~~~iv~G~d~~f~~----~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 79 KTVIEVKPDIITLGYDQKFDE----AELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HHHHHHCCSEEEECTTCHHHH----HHHHHHHHHHTCCCEEEECCCCC------------------
T ss_pred HHHHhcCCCEEEECCCCCCCH----HHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 688999999999999987642 23444555566 2333333 457999999999998774
No 7
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.82 E-value=2.2e-20 Score=156.38 Aligned_cols=132 Identities=16% Similarity=0.040 Sum_probs=98.2
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh-ccCccccccCCCccch
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVVT 98 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~-~k~VD~Vi~~~p~~it 98 (251)
|+++++.|+|||+|.||+.++++|+++| |+|+|+|++|+. | +|+++.+||++|++. ++.+|.|.+.....++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~--D~viv~v~~~~~----K-~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF--EKLIVAVAHSSA----K-NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEECCGG----G-CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC--CceEEEEccCCC----C-CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 5789999999999999999999999997 899999999863 4 589999999999996 7888988763333467
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcC---eEEEcCccC---CCChHHHHHHHHHhh
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG---KFKETKRTD---GISTSDIIMRIVKDY 159 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G---~~~~~~rt~---giSTT~Ii~rI~~~~ 159 (251)
.++++++++|++++|...-.++. ..-+....-+..+ +.+++++++ .+|||.|++.+..+-
T Consensus 75 ~~~~~~~~~~~ivrG~r~~~D~~-ye~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~gg 140 (157)
T 3nv7_A 75 AYLAKEYHCKVLVRGLRVVSDFE-YELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKG 140 (157)
T ss_dssp HHHHHHTTCCCBCCCCSCCCCHH-HHHHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECCcccchhh-hhHHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcCC
Confidence 89999999999999953322221 0001111122332 445555554 899999999887654
No 8
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.81 E-value=9.3e-20 Score=153.11 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=93.9
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhccCccccccCCCccchH
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQ 99 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k~VD~Vi~~~p~~it~ 99 (251)
|+++++.|+|||+|.||+.++++|+++| |+|+|+|++|+. | +|+++.+||++|++.+...|.|.+....+++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~--d~viv~v~~~~~----K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLF--NKIIVACAPTSR----K-DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGC--SEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHC--CcEEEEEecCCc----c-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 6789999999999999999999999998 899999998862 4 58999999999999644348776644445788
Q ss_pred HHHHhcCCCEEEeCCCcccccCCCCchHHHHH-HHcC---eEEEcCcc---CCCChHHHHHHHHHhh
Q 025533 100 EFLDKHQIDFVAHDSLPYADASGAGKDVYEFV-KAAG---KFKETKRT---DGISTSDIIMRIVKDY 159 (251)
Q Consensus 100 ~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~l-k~~G---~~~~~~rt---~giSTT~Ii~rI~~~~ 159 (251)
+++++++++++++|.+...++. .+-..+.+ +..+ +.+.+.++ ..+|||.|++++..+.
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~--~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 142 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFD--YEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGG 142 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHH--HHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEECCCchhhhh--hHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcCC
Confidence 9999999999999965443321 00001111 2222 45555444 3899999999987654
No 9
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.79 E-value=4e-19 Score=152.62 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=99.1
Q ss_pred CCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh-ccCccccccCCCccc
Q 025533 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVV 97 (251)
Q Consensus 19 r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~-~k~VD~Vi~~~p~~i 97 (251)
.|+++++.|+|||+|.||+.++++|+++| |+|+|+|++|+. | +|+++.+||+++++. ++.+|.|++......
T Consensus 21 ~mki~v~~GsFDpiH~GHl~li~~A~~~~--d~viv~v~~~p~----K-~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~ 93 (187)
T 3k9w_A 21 SMVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVGVADSRA----K-KPFFSLEERLKIANEVLGHYPNVKVMGFTGL 93 (187)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECCGG----G-CCSSCHHHHHHHHHHHHTTCTTEEEEEESSC
T ss_pred CcEEEEEEEeCCcCcHHHHHHHHHHHHHC--CcEEEEEecCCc----c-CCCCCHHHHHHHHHHHhccCCcEEEEechhh
Confidence 37899999999999999999999999997 889999998752 3 489999999999997 688999877433356
Q ss_pred hHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHc--C-eEEEcCcc---CCCChHHHHHHHHHhh
Q 025533 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA--G-KFKETKRT---DGISTSDIIMRIVKDY 159 (251)
Q Consensus 98 t~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~--G-~~~~~~rt---~giSTT~Ii~rI~~~~ 159 (251)
+.+++++++++++++|.+...++.. +......-+.. + +.+.+.++ ..||||.||+++..+.
T Consensus 94 ~~d~l~~l~~~~iv~G~r~~~Df~~-E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 160 (187)
T 3k9w_A 94 LKDFVRANDARVIVRGLRAVSDFEY-EFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGG 160 (187)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCHHH-HHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECCCcccccch-HHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcCC
Confidence 7899999999999999654433210 00011111222 2 44555443 4899999999987653
No 10
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.79 E-value=4.4e-19 Score=162.96 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=118.4
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCeE-EEEEecCcccccc-cC------CCCCCHHHHHHHHhhccCcccccc-C
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYL-LVGCCNDETTHKF-KG------KTVMTEDERYESLRHCKWVDEVIP-D 92 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~L-IVgV~sD~~~~~~-Kg------~pv~s~~ER~e~l~~~k~VD~Vi~-~ 92 (251)
.|++.|+||++|+||+.+|++|++.+....+ .|++++||++..+ .+ +++++.+||+++++.++ ||.+++ +
T Consensus 22 ~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~~~ 100 (308)
T 3op1_A 22 SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYLLD 100 (308)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEEEC
T ss_pred eEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEEec
Confidence 6999999999999999999999998743334 7889999998764 21 24999999999999998 999975 1
Q ss_pred C--------CccchHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCe--EEEcCc----cCCCChHHHHHHHHHh
Q 025533 93 A--------PWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGK--FKETKR----TDGISTSDIIMRIVKD 158 (251)
Q Consensus 93 ~--------p~~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~--~~~~~r----t~giSTT~Ii~rI~~~ 158 (251)
- |-..-.+++.+++++.+++|.|+.+|. +.|+ .+.|+++|. +..+++ +..||||.||+.|.++
T Consensus 101 F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~--~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~G 177 (308)
T 3op1_A 101 FSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKT--AEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDG 177 (308)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBC--STTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHHT
T ss_pred CCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCC--HHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHcC
Confidence 1 111112345578999999999999998 7773 556888774 777765 5689999999999999
Q ss_pred hHHHHHHHhhcCCC
Q 025533 159 YNQYVMRNLDRGYS 172 (251)
Q Consensus 159 ~~~y~~r~l~rg~~ 172 (251)
..+.|.+.|-|-|+
T Consensus 178 ~v~~A~~lLGrpy~ 191 (308)
T 3op1_A 178 NVKEAGKLLGAPLP 191 (308)
T ss_dssp CHHHHHHHHSSCCE
T ss_pred CHHHHHhhcCccee
Confidence 99999999988765
No 11
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.78 E-value=2.5e-19 Score=163.42 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=114.6
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCeE-EEEEecCcccccccC---CCCCCHHHHHHHHhhccCccccccC---CC
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYL-LVGCCNDETTHKFKG---KTVMTEDERYESLRHCKWVDEVIPD---AP 94 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~L-IVgV~sD~~~~~~Kg---~pv~s~~ER~e~l~~~k~VD~Vi~~---~p 94 (251)
.|++.|+||++|.||+.+|++|++.+....+ .|++++|+++.-+++ +|+++.+||+++|++++ ++.+++- +.
T Consensus 1 ~vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a~ 79 (293)
T 1mrz_A 1 MVVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLDFFRIKD 79 (293)
T ss_dssp -CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEECHHHHTT
T ss_pred CEEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEEhHHhhc
Confidence 3789999999999999999999988621112 578899998822333 46999999999999998 6666542 11
Q ss_pred ccchHHHHHh--cCCCEEEeCCCcccccCCCCchHHHHHHHcC-eEEEcCc----cCCCChHHHHHHHHHhhHHHHHHHh
Q 025533 95 WVVTQEFLDK--HQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKR----TDGISTSDIIMRIVKDYNQYVMRNL 167 (251)
Q Consensus 95 ~~it~~~l~~--~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G-~~~~~~r----t~giSTT~Ii~rI~~~~~~y~~r~l 167 (251)
. -..+|++. ++++++++|.|+.+|..+.| .++.|++.| ++..++. +..+|||.||+.|.++..+.+.+.|
T Consensus 80 l-s~~~Fi~~ill~~~~iVvG~Df~fG~~~~g--~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G~i~~a~~lL 156 (293)
T 1mrz_A 80 L-TPEGFVERYLSGVSAVVVGRDFRFGKNASG--NASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEGRVEEIPAYL 156 (293)
T ss_dssp C-CHHHHHHHHCTTCCEEEEETTCCBSGGGCB--CHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTTCTTTTHHHH
T ss_pred C-CHHHHHHHHhcCCCEEEECCCCCCCCCCCC--CHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcCcHHHHhhhc
Confidence 1 13577777 89999999999999876655 367788776 7777775 4589999999999999999999998
Q ss_pred hcCCC
Q 025533 168 DRGYS 172 (251)
Q Consensus 168 ~rg~~ 172 (251)
-|-|+
T Consensus 157 Gr~y~ 161 (293)
T 1mrz_A 157 GRYFE 161 (293)
T ss_dssp SSCCE
T ss_pred CCCeE
Confidence 77664
No 12
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.77 E-value=3.9e-18 Score=145.49 Aligned_cols=135 Identities=13% Similarity=0.101 Sum_probs=99.0
Q ss_pred CCCCCCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCC
Q 025533 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDA 93 (251)
Q Consensus 15 ~~~~r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~ 93 (251)
|...+|+++++.|+|||+|.||+.++++|+++| |+|+|+|+.++ .| +|+++.+||++|++ +++..+.|.+..
T Consensus 16 ~~~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~ 88 (177)
T 3nbk_A 16 PRGSHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQV 88 (177)
T ss_dssp ----CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEE
T ss_pred cCCCCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEe
Confidence 345678899999999999999999999999998 89999999886 24 47999999999999 578788877754
Q ss_pred CccchHHHHHhcCCCEEEeCCCcccccCCCCch---HHHHHHHcCeEEEcC---ccCCCChHHHHHHHHHh
Q 025533 94 PWVVTQEFLDKHQIDFVAHDSLPYADASGAGKD---VYEFVKAAGKFKETK---RTDGISTSDIIMRIVKD 158 (251)
Q Consensus 94 p~~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d---~y~~lk~~G~~~~~~---rt~giSTT~Ii~rI~~~ 158 (251)
..+++.++++++++++++.|.....++.. .-+ ....+ ..-+.+++. ....||||.|++++..+
T Consensus 89 ~e~l~vd~~~~~~a~~ivrGlr~~~Dfey-e~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 89 GHGLVVDFVRSCGMTAIVKGLRTGTDFEY-ELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp CCSCHHHHHHHTTCCEEEEEECTTCCHHH-HHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred cCchHHHHHHHcCCCEEEECCCchhHHHH-HHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 44678999999999999999654444310 000 00113 222444443 34589999999988654
No 13
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.77 E-value=2.8e-18 Score=140.48 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=94.5
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCCCccch
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPWVVT 98 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~p~~it 98 (251)
|+++++.|+|||+|.||+.++++|++.+ |.++|+++++|+ | +++++.++|++|++ ++..+|.+.+..--..+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~~~~p~----k-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~ 73 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASPS----K-KPMFTLEERVALAQQATAHLGNVEVVGFSDLM 73 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCCS----S-CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEECCCCC----C-CCCCCHHHHHHHHHHHHhcCCCeEEcccchHH
Confidence 4679999999999999999999999997 789999999863 3 47899999999999 57888887652111346
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHH-HHcC----eEEEcCcc--CCCChHHHHHHHHHh
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV-KAAG----KFKETKRT--DGISTSDIIMRIVKD 158 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~l-k~~G----~~~~~~rt--~giSTT~Ii~rI~~~ 158 (251)
.++++++++++++.|.|...+... .-.+..+ +..+ .+..++.. ..+|||.||++|.++
T Consensus 74 ~~~l~~l~~~~~v~G~d~~~~~~~--~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 74 ANFARNQHATVLIRGLRAVADFEY--EMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp HHHHHHTTCCEEEEECCTTCCHHH--HHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeccchhhhHH--HHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 688999999999999876654311 0001111 2222 23333322 479999999999865
No 14
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.76 E-value=4.4e-18 Score=143.74 Aligned_cols=131 Identities=13% Similarity=0.078 Sum_probs=93.2
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh-ccCccccccCCCccch
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVVT 98 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~-~k~VD~Vi~~~p~~it 98 (251)
++++++.|+|||+|.||+.++++|++.| |+|+|+++.++ .| +|+++.++|++|++. ++..+.|.+....+.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 4689999999999999999999999998 89999999876 23 589999999999994 6777777653323478
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHH-HHcC---eEEEcCc---cCCCChHHHHHHHHHhh
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV-KAAG---KFKETKR---TDGISTSDIIMRIVKDY 159 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~l-k~~G---~~~~~~r---t~giSTT~Ii~rI~~~~ 159 (251)
.++++++++++++.|.|...++. .+.....+ +..+ ..+.+.. -..||||.||+++..+.
T Consensus 76 vd~~~~l~~~~~I~G~d~~~d~~--~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRGLRAVSDFE--YELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp HHHHHHHTCCEEEEEECTTCCHH--HHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEcCCchhhhh--HHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcCC
Confidence 89999999999999976555431 11000111 1211 2333322 23499999999987654
No 15
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.75 E-value=8e-18 Score=142.53 Aligned_cols=131 Identities=15% Similarity=0.079 Sum_probs=92.7
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCcccccc-CCCccc
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIP-DAPWVV 97 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~-~~p~~i 97 (251)
|++++++|+|||+|.||+.++++|++.| |+|+|+++.++. | +|+++.++|++|++ +++.++.|.+ ...-+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v~~~~~----K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGVFINTS----K-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEEecCCC----C-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 5789999999999999999999999998 899999987752 4 47999999999999 5788888766 333356
Q ss_pred hHHHHHhcCCCEEEeCCCcccccCCCCchHHHHH-HHc--C-eEEEc---CccCCCChHHHHHHHHHhh
Q 025533 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV-KAA--G-KFKET---KRTDGISTSDIIMRIVKDY 159 (251)
Q Consensus 98 t~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~l-k~~--G-~~~~~---~rt~giSTT~Ii~rI~~~~ 159 (251)
+.++++++++++++.|.+...++. ..-..+.+ +.. + ..+.+ +....||||.||+++..+.
T Consensus 75 tvd~~~~l~~~~~i~G~~~~~d~~--~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g~ 141 (171)
T 3nd5_A 75 TVESAKSLGANFLIRGIRNVKDYE--YEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGG 141 (171)
T ss_dssp HHHHHHHHTCCEEEEEECSHHHHH--HHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCCchhhhH--HHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcCC
Confidence 889999999999999965443321 00001111 111 1 22222 2344899999999987653
No 16
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.74 E-value=4.1e-18 Score=158.16 Aligned_cols=147 Identities=12% Similarity=0.093 Sum_probs=114.9
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCe-EEEEEecCcccccc-cC----CCCCCHHHHHHHHhhccCcccccc---C
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTY-LLVGCCNDETTHKF-KG----KTVMTEDERYESLRHCKWVDEVIP---D 92 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~-LIVgV~sD~~~~~~-Kg----~pv~s~~ER~e~l~~~k~VD~Vi~---~ 92 (251)
+|++.|+||++|.||+.+|++|++.+.... .+|++++|+++..+ ++ +++++.++|+++|+.++ ||.+++ +
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g-VD~v~v~~F~ 95 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG-IDGVLVIDFT 95 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT-CSEEEEECTT
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC-CCEEEEcccc
Confidence 699999999999999999999998752212 38899999988664 21 35899999999999998 999875 1
Q ss_pred CCc-cc-hHHHHHh-----cCCCEEEeCCCcccccCCCCchHHHHHHHc---C-eEEEcCc----cCCCChHHHHHHHHH
Q 025533 93 APW-VV-TQEFLDK-----HQIDFVAHDSLPYADASGAGKDVYEFVKAA---G-KFKETKR----TDGISTSDIIMRIVK 157 (251)
Q Consensus 93 ~p~-~i-t~~~l~~-----~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~---G-~~~~~~r----t~giSTT~Ii~rI~~ 157 (251)
..+ .+ ..+|++. ++++++++|.|+.+|..+.|+ .+.|+++ | .+..+++ +..||||.||+.|.+
T Consensus 96 ~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~--~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 96 RELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGT--ADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEE--HHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCC--HHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 111 12 2456665 689999999999998776663 4556654 4 6777776 458999999999999
Q ss_pred hhHHHHHHHhhcCC
Q 025533 158 DYNQYVMRNLDRGY 171 (251)
Q Consensus 158 ~~~~y~~r~l~rg~ 171 (251)
+..+.+.+.|-|-|
T Consensus 174 G~i~~a~~lLGrpy 187 (338)
T 2x0k_A 174 GDVARANWALGRHF 187 (338)
T ss_dssp TCHHHHHHHHTSCC
T ss_pred CcHHHHHHhcceee
Confidence 99999999996654
No 17
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.72 E-value=2.7e-17 Score=138.61 Aligned_cols=127 Identities=19% Similarity=0.178 Sum_probs=92.4
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCCCccchH
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPWVVTQ 99 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~p~~it~ 99 (251)
.++++.|+|||+|.||+.++++|++.| |+|+|++++++. | +|+++.++|++|++ +++.++.|.+....+.+.
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~v~~~~~----k-k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tv 85 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENPR----K-KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLV 85 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCTT----C-CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEEEeCCCC----C-CCCCCHHHHHHHHHHHhcCCCCEEEecCcchHH
Confidence 369999999999999999999999998 899999999852 3 38899999999999 799888876632223688
Q ss_pred HHHHhcCCCEEEeCCCcccccCCCCchHH--HHHHHcC----eEEEc---CccCCCChHHHHHHHHHh
Q 025533 100 EFLDKHQIDFVAHDSLPYADASGAGKDVY--EFVKAAG----KFKET---KRTDGISTSDIIMRIVKD 158 (251)
Q Consensus 100 ~~l~~~~iD~vv~G~d~~~~~~~~g~d~y--~~lk~~G----~~~~~---~rt~giSTT~Ii~rI~~~ 158 (251)
++++++++++++.|.....++ +... ..+.+.| ..+.+ +....+|||.||+++..+
T Consensus 86 d~l~~l~~~~~i~gl~~w~d~----~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 86 DYLKKHGIKVLVRGLRAVTDY----EYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HHHHHHTCCEEEEEECTTSCH----HHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHhCCCeEEeCCCcccch----hhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 999999999999884211111 0111 1112211 23332 233469999999998754
No 18
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.71 E-value=4.1e-17 Score=135.70 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=94.1
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCCCc-cc
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPW-VV 97 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~p~-~i 97 (251)
|+++++.|+|||+|.||+.++++|++.+ +.++|+++.+| . | +++++.++|++|++ ++..+|.+.+. ++ ..
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~~~~~p--~--k-~~l~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNS--S--K-KPLFSVEERCELLREVTKDIPNITVE-TSQGL 73 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCC--S--S-CCSSCHHHHHHHHHHHHTTCTTEEEE-ECSSC
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEEECCCC--c--c-CCCCCHHHHHHHHHHHHhcCCCEEEc-ccchH
Confidence 3579999999999999999999999997 78888887653 2 3 47899999999999 46778877652 22 35
Q ss_pred hHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHc---C-eEEEcCc---cCCCChHHHHHHHHHh
Q 025533 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA---G-KFKETKR---TDGISTSDIIMRIVKD 158 (251)
Q Consensus 98 t~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~---G-~~~~~~r---t~giSTT~Ii~rI~~~ 158 (251)
+.+.++.+++++++.|.|..++....+ ....+.+. | .++.+.. ...||||.||++|.++
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~--~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEM--QGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHH--HHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHH--HHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 678889999999999998777542111 11222221 3 3333322 3479999999999865
No 19
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.70 E-value=1.5e-16 Score=130.64 Aligned_cols=128 Identities=13% Similarity=0.156 Sum_probs=88.7
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCCCc-cc
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPW-VV 97 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~p~-~i 97 (251)
|+ +++.|+|||+|.||+.++++|++.+ +.++|+++.+++ + ++.++++.++|++|++ ++..+|.+.+. ++ ..
T Consensus 1 m~-~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~~~~p~--k-~~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (160)
T 1od6_A 1 MH-VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENPS--K-RGQYLFSAEERLAIIREATAHLANVEAA-TFSGL 73 (160)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC--------CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSC
T ss_pred Ce-EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCCC--C-CCCCCCCHHHHHHHHHHHhcCCCCEEEE-ecCch
Confidence 45 8999999999999999999999997 789888887753 1 1236899999999999 56778876652 22 25
Q ss_pred hHHHHHhcCCCEEEeCCCcccccCCCCchHHH--H-HHHcC----eEEEcCc--cCCCChHHHHHHHHHh
Q 025533 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYE--F-VKAAG----KFKETKR--TDGISTSDIIMRIVKD 158 (251)
Q Consensus 98 t~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~--~-lk~~G----~~~~~~r--t~giSTT~Ii~rI~~~ 158 (251)
+.++++++++++++.|.+...++ +.... . .+..+ .+..++. ...||||.||++|..+
T Consensus 74 ~~~~l~~l~~~~~v~G~d~~~~~----~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 74 LVDFVRRVGAQAIVKGLRAVSDY----EYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHHTTCSEEEEEECTTSCH----HHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeCCcccch----HHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 67889999999999997633221 00110 1 11221 2222222 3479999999999765
No 20
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.69 E-value=3.6e-17 Score=137.74 Aligned_cols=134 Identities=11% Similarity=-0.026 Sum_probs=97.8
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-CCCCCHHHHHHHHh-hccCccccccCC-----
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDA----- 93 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-~pv~s~~ER~e~l~-~~k~VD~Vi~~~----- 93 (251)
+++++.|+|||+|.||+.++++|++.+..+.+++.+++++. .|+ +++++.++|++|++ +++.+|.+.+..
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~~~ 79 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSICLEELSR 79 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEECCTGGGS
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEEehHHhcC
Confidence 57999999999999999999999999877889999987762 242 46899999999999 577788776521
Q ss_pred -CccchHHHHHhcCCCE------EEeCCCcccccCCCCchHHHHHHHcCeEEEcCc-----------------cCCCChH
Q 025533 94 -PWVVTQEFLDKHQIDF------VAHDSLPYADASGAGKDVYEFVKAAGKFKETKR-----------------TDGISTS 149 (251)
Q Consensus 94 -p~~it~~~l~~~~iD~------vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~r-----------------t~giSTT 149 (251)
.+..+.+.++.++..+ ++.|.|..++..+-+ .++.+.+.+.+..++| ...||||
T Consensus 80 ~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~w~--~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 80 KGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWY--NIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp CSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGST--THHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEEehhhhhhhhccC--CHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 1234566777666555 999998776543222 2566666665555543 2379999
Q ss_pred HHHHHHHHhh
Q 025533 150 DIIMRIVKDY 159 (251)
Q Consensus 150 ~Ii~rI~~~~ 159 (251)
.||++|.++.
T Consensus 158 ~IR~~l~~g~ 167 (189)
T 2qtr_A 158 LLRERYKEKK 167 (189)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998654
No 21
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.67 E-value=7.2e-16 Score=131.12 Aligned_cols=134 Identities=13% Similarity=-0.060 Sum_probs=89.0
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-CCCCCHHHHHHHHh-hccCccccccCC-----
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDA----- 93 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-~pv~s~~ER~e~l~-~~k~VD~Vi~~~----- 93 (251)
+++++.|+|||+|.||+.++++|++.+..+.+++++++++ + .|+ .++++.++|++|++ +++.+|.+.+..
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~-~--~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 84 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIP-P--HKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMER 84 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEECCGGGST
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCC-C--CcCCcCCCCHHHHHHHHHHHHcCCCCeEEeHHHhcC
Confidence 6789999999999999999999999986688999999876 2 243 46899999999999 578788776521
Q ss_pred -CccchHHHHHhcC---CC---EEEeCCCcccccCCCCchHHHHHHHcCeEEEcCc-----------------cCCCChH
Q 025533 94 -PWVVTQEFLDKHQ---ID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR-----------------TDGISTS 149 (251)
Q Consensus 94 -p~~it~~~l~~~~---iD---~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~r-----------------t~giSTT 149 (251)
....+.+.++.++ |+ +++.|.|...+-. ... .|+.+.+...+...+| ...||||
T Consensus 85 ~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~-~W~-~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 85 EGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLP-KWY-KLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp TCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCC-CCH-HHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred CCCCChHHHHHHHHHHCCCCcEEEEEecchhhhhc-ccc-CHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 1124555665553 44 8999998776532 111 1232222222222222 2379999
Q ss_pred HHHHHHHHhh
Q 025533 150 DIIMRIVKDY 159 (251)
Q Consensus 150 ~Ii~rI~~~~ 159 (251)
.||++|..+.
T Consensus 163 ~IR~~i~~g~ 172 (194)
T 1kam_A 163 MIRERFKSKK 172 (194)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999998764
No 22
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.61 E-value=1.6e-16 Score=131.54 Aligned_cols=127 Identities=17% Similarity=0.228 Sum_probs=88.8
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh-c-cCcc-cc---ccCCCc
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-C-KWVD-EV---IPDAPW 95 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~-~-k~VD-~V---i~~~p~ 95 (251)
+|++.|+|||+|.||+.++++|++++ .|+|+|++++|+..++ +.+++++.++|++|++. + +..+ .+ -+.+++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~-~d~viv~v~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~ 79 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLG-GRDITIGVTSDRMARA-RIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPY 79 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHH-TTCEEEEEECHHHHHH-HSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhC-CCEEEEEECCCccccc-cCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCC
Confidence 58999999999999999999999983 4899999999985432 24689999999999994 5 4322 12 235666
Q ss_pred cchHHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCe----EEEcCc-----cCCCChHHHHHHHHHh
Q 025533 96 VVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGK----FKETKR-----TDGISTSDIIMRIVKD 158 (251)
Q Consensus 96 ~it~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~----~~~~~r-----t~giSTT~Ii~rI~~~ 158 (251)
+.+. .-.+|+++++.+.+.+ +...-+..++.|- +..++. ...+|||.||+++++.
T Consensus 80 g~~~----~~~~d~ivvs~Et~~~----~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id~ 143 (148)
T 3do8_A 80 GKTL----DVDFEYLVVSPETYEM----ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEIDR 143 (148)
T ss_dssp TTTT----TSCCSEEEECTTTHHH----HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC-
T ss_pred CCCC----CCCCCEEEEChhhccc----HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHhh
Confidence 6543 3688999999876653 2223334456674 555443 3469999999887653
No 23
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.58 E-value=7.1e-15 Score=126.78 Aligned_cols=92 Identities=15% Similarity=0.061 Sum_probs=71.8
Q ss_pred E-EEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccC------C
Q 025533 22 R-VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPD------A 93 (251)
Q Consensus 22 ~-V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~------~ 93 (251)
+ +++.|+|||+|.||+.++++|++.+..+.++++++.++. .|..++++.++|++|++ +++.+|.+.+. .
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 80 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhcCC
Confidence 5 899999999999999999999998866889888887752 24346899999999999 67778877652 1
Q ss_pred CccchHHHHHhc----CCC---EEEeCCCc
Q 025533 94 PWVVTQEFLDKH----QID---FVAHDSLP 116 (251)
Q Consensus 94 p~~it~~~l~~~----~iD---~vv~G~d~ 116 (251)
.+..|.++++.+ +++ ++++|.|.
T Consensus 81 ~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 81 APSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp SCCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 123455666554 899 89999853
No 24
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.57 E-value=5.5e-14 Score=124.44 Aligned_cols=93 Identities=18% Similarity=0.163 Sum_probs=73.8
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHh-hccCccccccCC-----
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDA----- 93 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~~~----- 93 (251)
++++++.|+|||+|.||+.++++|++.+..|.++|++++++ +. |+.++++.++|++|++ ++..++.|.+..
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~-p~--K~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 99 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARP-PH--RETPQVSAAQRLAMVERAVAGVERLTVDPRELQR 99 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCC-GG--GSCTTCCHHHHHHHHHHHHTTCTTEEECCGGGGS
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCC-CC--CCCCCCCHHHHHHHHHHHhcCCCeEEEeeeeecC
Confidence 46799999999999999999999999986789999999986 22 4456899999999999 577777766532
Q ss_pred -CccchHHHHHhc----CCC---EEEeCCC
Q 025533 94 -PWVVTQEFLDKH----QID---FVAHDSL 115 (251)
Q Consensus 94 -p~~it~~~l~~~----~iD---~vv~G~d 115 (251)
.+..|.+.++.+ +|+ +++.|.|
T Consensus 100 ~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 100 DKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 224567777655 688 6888874
No 25
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.54 E-value=1.1e-14 Score=123.67 Aligned_cols=130 Identities=11% Similarity=0.032 Sum_probs=86.4
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh-ccCcc--cccc-----
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVD--EVIP----- 91 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~-~k~VD--~Vi~----- 91 (251)
++++++.|+|||+|.||+.+++ |++.+ |+|+++++.+. ..| ++..+.++|++|++. +...+ .+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 3579999999999999999998 87776 89999998862 123 468999999999994 43221 1211
Q ss_pred -----C-CCcc-chHHHHHhcCCC---EEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHh
Q 025533 92 -----D-APWV-VTQEFLDKHQID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKD 158 (251)
Q Consensus 92 -----~-~p~~-it~~~l~~~~iD---~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~ 158 (251)
. ..|+ .|...+++..|+ +++.|.|...+-. ... .++.+-+...++.++|...+|||+||++|.++
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~-~W~-~~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFA-KFY-KAEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGG-GST-THHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcc-cch-hHHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 1 2233 233445554454 4778887554311 011 24455555678888998999999999999876
No 26
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.52 E-value=4e-14 Score=119.82 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=87.3
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-CCCCCHHHHHHHHh-hccCccccccCC-----
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDA----- 93 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-~pv~s~~ER~e~l~-~~k~VD~Vi~~~----- 93 (251)
+++++.|+|||+|.||+.++++|++.++.+.+++.++.++. .|+ .++++.++|++|++ +++..+.+.+..
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 57899999999999999999999999866888876666652 243 46899999999999 566555554421
Q ss_pred -CccchHHHHH---hcCCC---EEEeCCCcccccCCCCchHHHHHHHcCeEEEcCcc-----------------CCCChH
Q 025533 94 -PWVVTQEFLD---KHQID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRT-----------------DGISTS 149 (251)
Q Consensus 94 -p~~it~~~l~---~~~iD---~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt-----------------~giSTT 149 (251)
....|.+.++ +..|+ +++.|.|...+-. ...+ ++.+-+...+...+|. ..+|||
T Consensus 80 ~~~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~~~-~W~~-~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST 157 (189)
T 2h29_A 80 GGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLE-KWYQ-IEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISST 157 (189)
T ss_dssp CSBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTTGG-GSTT-HHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHH
T ss_pred CCCCCHHHHHHHHHHHCCCCcEEEEEecchhhhhc-cccC-HHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHH
Confidence 1223444444 44577 7888986443211 0011 2223222333333331 479999
Q ss_pred HHHHHHHHh
Q 025533 150 DIIMRIVKD 158 (251)
Q Consensus 150 ~Ii~rI~~~ 158 (251)
.||+++..+
T Consensus 158 ~IR~~i~~g 166 (189)
T 2h29_A 158 MIRQRVSEG 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999765
No 27
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.51 E-value=9.9e-14 Score=116.92 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=82.8
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEE-ecCcccccccCCCCCCHHHHHHHHhh-ccCc----ccccc--C
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGC-CNDETTHKFKGKTVMTEDERYESLRH-CKWV----DEVIP--D 92 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV-~sD~~~~~~Kg~pv~s~~ER~e~l~~-~k~V----D~Vi~--~ 92 (251)
+++++.|+|||+|.||+.++++|++.+ +.++|+| +.++ +++ ..++++.++|++|++. +... |.+++ -
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~-p~~--~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~ 78 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEV--DELIICIGSAQL-SHS--IRDPFTAGERVMMLTKALSENGIPASRYYIIPV 78 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTC-CSS--SSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhC--CeeEEEECCCCC-CcC--CCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEec
Confidence 479999999999999999999999996 7899988 4444 433 3457899999999995 4433 34432 1
Q ss_pred CCcc---chHHHHHhc--CCCEEEeCCCcccccCCCCchHHHHHHHcC-eEEEcCccC--CCChHHHHHHHHHhh
Q 025533 93 APWV---VTQEFLDKH--QIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKRTD--GISTSDIIMRIVKDY 159 (251)
Q Consensus 93 ~p~~---it~~~l~~~--~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G-~~~~~~rt~--giSTT~Ii~rI~~~~ 159 (251)
+.+. ...++++++ ..++++.|.+. .-+.++..| .++.++... .||||.||+++..+.
T Consensus 79 d~~~~~~~w~~~~~~l~~~~~~~v~gr~~----------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G~ 143 (181)
T 1ej2_A 79 QDIECNALWVGHIKMLTPPFDRVYSGNPL----------VQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDG 143 (181)
T ss_dssp CCCSCHHHHHHHHHHHSCCCSEEECCCHH----------HHHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHTC
T ss_pred CccCCHHHHHHHHHHHCCCCCEEEECCHH----------HHHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcCC
Confidence 1111 123444443 56777766421 112344455 555666533 599999999987653
No 28
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.48 E-value=5.7e-13 Score=110.97 Aligned_cols=122 Identities=17% Similarity=0.276 Sum_probs=79.2
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEE-ecCcccccccCCCCCCHHHHHHHHh-hccCcc-cccc--CCCc-
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGC-CNDETTHKFKGKTVMTEDERYESLR-HCKWVD-EVIP--DAPW- 95 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV-~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD-~Vi~--~~p~- 95 (251)
++++.|+|||+|.||+.++++|++.+ |.++|+| ++++ +++ ..+.++.++|++|++ +++..+ .+.+ -+.+
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~-p~~--~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~ 76 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQK-SHT--LENPFTAGERILMITQSLKDYDLTYYPIPIKDIE 76 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTC-CSS--SSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCS
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC--CeEEEEEcCCCC-CCC--CCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcc
Confidence 58999999999999999999999996 7899988 5554 332 234679999999999 466554 3321 1111
Q ss_pred --cchHHHHHhc--CCCEEEeCCCcccccCCCCchHHH-HHHHcC-eEEEcCccC--CCChHHHHHHHHHhh
Q 025533 96 --VVTQEFLDKH--QIDFVAHDSLPYADASGAGKDVYE-FVKAAG-KFKETKRTD--GISTSDIIMRIVKDY 159 (251)
Q Consensus 96 --~it~~~l~~~--~iD~vv~G~d~~~~~~~~g~d~y~-~lk~~G-~~~~~~rt~--giSTT~Ii~rI~~~~ 159 (251)
....+.++++ ..++++.+. +.++ .+...| .++.++..+ .||||.||+++..+.
T Consensus 77 ~~~~w~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g~ 137 (168)
T 1f9a_A 77 FNSIWVSYVESLTPPFDIVYSGN-----------PLVRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNGE 137 (168)
T ss_dssp CGGGHHHHHHHHSCCCSEEECCC-----------HHHHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHhccCCCEEEECc-----------HHHHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcCC
Confidence 1122334433 446665443 1122 233344 445555433 599999999997653
No 29
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.48 E-value=1.2e-13 Score=124.74 Aligned_cols=128 Identities=17% Similarity=0.158 Sum_probs=86.4
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhc-cCc--ccccc----C
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC-KWV--DEVIP----D 92 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~-k~V--D~Vi~----~ 92 (251)
|+++++.|+|||+|.||+.++++|++.+ +.++|+|++++.+++. ...++.++|++|++.+ ... +.+++ +
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~v~~~~~p~~~--~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAADT--RNPWRSPERMAMIEACLSPQILKRVHFLTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCCCS--SSCSCHHHHHHHHHTTSCHHHHTTEEEEEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEEECCcccCCCC--CCCCCHHHHHHHHHHHhhhccCCeEEEEECCC
Confidence 5789999999999999999999999997 7899999998766542 2458999999999954 322 22322 2
Q ss_pred CC-----ccc-hHHHHHhcC---CCEEEeCCCcccccCCCCchHHHHHHHc-C-eEEEcCccCCCChHHHHHHHHHhh
Q 025533 93 AP-----WVV-TQEFLDKHQ---IDFVAHDSLPYADASGAGKDVYEFVKAA-G-KFKETKRTDGISTSDIIMRIVKDY 159 (251)
Q Consensus 93 ~p-----~~i-t~~~l~~~~---iD~vv~G~d~~~~~~~~g~d~y~~lk~~-G-~~~~~~rt~giSTT~Ii~rI~~~~ 159 (251)
.. |.- ..++++.+. .++++.|.+.... .. ..+.. | .++.++....||||.||++|.++.
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~------~~--~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g~ 152 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS------SY--YLNLFPQWDYLETGHYPDFSSTAIRGAYFEGK 152 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG------GG--GGGSCTTSEEEECCCCTTCCHHHHHHHHHHTC
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC------hH--HHHhccccceeecccCCCCCcHHHHHHHHcCC
Confidence 21 221 123344432 6788887643211 11 12223 3 566666567899999999997653
No 30
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.42 E-value=1.1e-12 Score=120.75 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=83.2
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCccc----ccc-cCCCCCCHHHHHHHHh-hccCccc-ccc-
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETT----HKF-KGKTVMTEDERYESLR-HCKWVDE-VIP- 91 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~----~~~-Kg~pv~s~~ER~e~l~-~~k~VD~-Vi~- 91 (251)
++++++.|+|||+|.||+.++++|++.| |+|+|+|++++.. ++. +.+++++.++|++||+ ++...+. |.+
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~ 79 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIH 79 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 4579999999999999999999999997 9999999998742 111 1233599999999998 5665444 321
Q ss_pred -------CC-C-----cc-chHHHHH--hcCCCEEEeCCCcccccCCCCchHHHHHHHcC-eEEEcC--c-cCCCChHHH
Q 025533 92 -------DA-P-----WV-VTQEFLD--KHQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETK--R-TDGISTSDI 151 (251)
Q Consensus 92 -------~~-p-----~~-it~~~l~--~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G-~~~~~~--r-t~giSTT~I 151 (251)
+. | |. ....+++ .+++++++.++. +. .-...+..| +++.++ + ...+|||.|
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~-~~--------~~~~~~~~~~e~v~l~~~~~~~~iSsT~I 150 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEP-QD--------KAPYEKYLGLEVSLVDPDRTFFNVSATKI 150 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCG-GG--------HHHHHHHTCCEEECCCSSCCSSCCCHHHH
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCC-CC--------HHHHHHHcCCceEEeCCcccCCCCCHHHH
Confidence 11 2 21 1112233 357787665542 21 112344556 566665 3 358999999
Q ss_pred HHHH
Q 025533 152 IMRI 155 (251)
Q Consensus 152 i~rI 155 (251)
++.+
T Consensus 151 Re~~ 154 (365)
T 1lw7_A 151 RTTP 154 (365)
T ss_dssp HHCG
T ss_pred HhCh
Confidence 9865
No 31
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.36 E-value=1.7e-12 Score=115.19 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=54.1
Q ss_pred CCeEEEEccccCCCCHHHHHHHHHHhhhCCCCe--EEEEEecCcccccccCCCCCCHHHHHHHHh-hccCcccc
Q 025533 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTY--LLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEV 89 (251)
Q Consensus 19 r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~--LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~V 89 (251)
.|+++++.|+|||+|.||+.++++|++.++.+. .+||+...+.....+.+++++.++|++|++ ++...+.+
T Consensus 5 ~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~ 78 (252)
T 1nup_A 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWI 78 (252)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSE
T ss_pred CceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCce
Confidence 367899999999999999999999998874442 677667666554443346899999999999 56544433
No 32
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.34 E-value=1.8e-12 Score=117.12 Aligned_cols=72 Identities=21% Similarity=0.126 Sum_probs=51.0
Q ss_pred CCeEEEEccccCCCCHHHHHHHHHHhhhCCCCe---EEEEEecCcccccccCCCCCCHHHHHHHHh-hccCcccccc
Q 025533 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTY---LLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIP 91 (251)
Q Consensus 19 r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~---LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~-~~k~VD~Vi~ 91 (251)
.++++++.|+|||+|.||+.++++|++.++.+. ++|++ ..+.....+..++.+.++|++|++ ++...+.+.+
T Consensus 7 ~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~-f~P~~~~~~K~~l~s~~~R~~ml~~ai~~~~~~~v 82 (279)
T 1kqn_A 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGI-ISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEV 82 (279)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEE-EEECCGGGCCTTCCCHHHHHHHHHHHTTTCSSEEE
T ss_pred CceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEE-EcCCCCCccccCCCCHHHHHHHHHHHhcCCCcEEE
Confidence 356799999999999999999999998874443 44433 222222222246899999999999 4565665544
No 33
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.28 E-value=1.3e-11 Score=112.08 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=50.7
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhh
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH 82 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~ 82 (251)
|+++++.|+|||+|.||+.++++|++.+ |.|+|+|++++..++ .++.+|.++|++||+.
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~v~~~~~~~~--~~~~~~~~~R~~m~~~ 65 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTPN--IKNPFSFEQRKQMIES 65 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCCC--SSSCSCHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEEECCCCCCcc--cCCCCCHHHHHHHHHH
Confidence 4689999999999999999999999997 799999998764432 2467899999999994
No 34
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=7e-11 Score=110.41 Aligned_cols=145 Identities=19% Similarity=0.244 Sum_probs=97.0
Q ss_pred CeEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcc--cccccCCC-CCCHHHHHHHHhhccCcccccc-CCCc
Q 025533 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDET--THKFKGKT-VMTEDERYESLRHCKWVDEVIP-DAPW 95 (251)
Q Consensus 20 ~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~--~~~~Kg~p-v~s~~ER~e~l~~~k~VD~Vi~-~~p~ 95 (251)
+.+|++.|.|||||.||+.+|++|++ . + ++++|.+-+. .. +|.| +++.++|++++..++ ||.|+. +..+
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~-~--~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~G-vD~vielpF~~ 124 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE-H--G-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRAG-ADIVVEGPPMG 124 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT-S--S-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHHT-CSEEEECCCGG
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHH-c--C-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHCC-CCEEEEcCchh
Confidence 45799999999999999999999999 2 3 5555655333 32 4444 899999999999996 999886 2222
Q ss_pred cc-hHH-------HHHhcCCCEEEeCCCcccc--------cCC----------------------CCchHHH------HH
Q 025533 96 VV-TQE-------FLDKHQIDFVAHDSLPYAD--------ASG----------------------AGKDVYE------FV 131 (251)
Q Consensus 96 ~i-t~~-------~l~~~~iD~vv~G~d~~~~--------~~~----------------------~g~d~y~------~l 131 (251)
.+ ..+ ++..++++.+|+|..+..+ ..+ ...+.+- .+
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~~~~~~~~~~~~~i~~~~~~~~kp~~~~g~ey~~~~~~~l~~pn~il~~y~kai 204 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMI 204 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEECCCHHHHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECCCCchhHHHHHHHHhcccccccccchhccCcHHHHHHHhccCCChHHHHHHHHH
Confidence 21 223 4456899999999722111 000 0011111 12
Q ss_pred HHcC--------eEEEcCccCCCChHHHHHHHHHhh-H-----------HHHHHHhhcCC
Q 025533 132 KAAG--------KFKETKRTDGISTSDIIMRIVKDY-N-----------QYVMRNLDRGY 171 (251)
Q Consensus 132 k~~G--------~~~~~~rt~giSTT~Ii~rI~~~~-~-----------~y~~r~l~rg~ 171 (251)
.+.| +++.+||...+|+|.||+.|.++. + .++.+.++.|-
T Consensus 205 ~~~~~~~~~~~i~~~~i~R~~~~SAS~IR~~i~~g~~~~~~~lVP~~t~~~l~~~~~~G~ 264 (357)
T 3gmi_A 205 YKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGK 264 (357)
T ss_dssp HHHHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHHHHTTC
T ss_pred HHhCcCcCCCCCeEEEecCCCcccHHHHHHHHHcCChhHHHhcCChHHHHHHHHHHhcCC
Confidence 2212 678889988999999999999874 1 35666666664
No 35
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.90 E-value=1.4e-09 Score=98.53 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=51.2
Q ss_pred EEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC----CCCCCHHHHHHHHhhccCccccccC
Q 025533 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG----KTVMTEDERYESLRHCKWVDEVIPD 92 (251)
Q Consensus 23 V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg----~pv~s~~ER~e~l~~~k~VD~Vi~~ 92 (251)
|.+.|+||.+|.||+.+|++|++.+ +.+||++..+|... .++ +.+.+.++|+++++.++ ||.|+..
T Consensus 24 V~~vgtfdgLH~GH~sLI~~A~~~a--d~vVVSffvnP~qf-~~~ed~~~yp~tle~d~~lL~~~G-VD~vf~p 93 (280)
T 2ejc_A 24 IGFVPTMGYLHEGHLSLVRRARAEN--DVVVVSIFVNPTQF-GPNEDYERYPRDFERDRKLLEKEN-VDCIFHP 93 (280)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHS--SEEEEEECCCGGGC-CTTSCGGGSCCCHHHHHHHHHTTT-CSEEECC
T ss_pred EEEEcCCccccHHHHHHHHHHHHhC--CEEEEEEeCChHHh-cCCcccccCCCCHHHHHHHHHHCC-CCEEEeC
Confidence 4445999999999999999999996 66677775555321 122 22688999999999999 9999873
No 36
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.18 E-value=1.1e-05 Score=76.16 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=59.8
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhc-cCc---ccccc---CC
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC-KWV---DEVIP---DA 93 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~-k~V---D~Vi~---~~ 93 (251)
+.|++.|+|||+|.||..+.++|.+.+..|.|++--...+ .| .--.+.+.|+++++.+ ... +.|++ +.
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~ 267 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 267 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechH
Confidence 3578899999999999999999999875566654444333 13 2368999999999853 321 22221 11
Q ss_pred Cc-------cchHHHH-HhcCCCEEEeCCCcc
Q 025533 94 PW-------VVTQEFL-DKHQIDFVAHDSLPY 117 (251)
Q Consensus 94 p~-------~it~~~l-~~~~iD~vv~G~d~~ 117 (251)
+. ++...++ +.++..++++|.|..
T Consensus 268 ~m~~aGPreailhaiirkn~G~t~fIVGrDha 299 (396)
T 1jhd_A 268 DMLYAGPREAVLHAYFRQNMGATHFIIGRDHA 299 (396)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred HhhcCCchHHHHHHHHHHcCCCcEEEECCCCC
Confidence 11 1212222 345889999998764
No 37
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.01 E-value=3.9e-06 Score=76.15 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=77.4
Q ss_pred EEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCccccccc-C----CCCCCHHHHHHHHhhccCccccccCCC---
Q 025533 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK-G----KTVMTEDERYESLRHCKWVDEVIPDAP--- 94 (251)
Q Consensus 23 V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~K-g----~pv~s~~ER~e~l~~~k~VD~Vi~~~p--- 94 (251)
|.+.|. +|.||+.++++|++.+ + .|.|+.++++..+- + +.+.+.++++++++.++ ||.++....
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a--~--~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~p~~~~m 99 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTN--D--ITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFHPAVEDM 99 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTS--S--EEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEECCCHHHH
T ss_pred EECCcc---ccHHHHHHHHHHHHhC--C--EEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeCCHHHC
Confidence 558997 9999999999999986 5 55566666655552 1 23889999999999998 998886321
Q ss_pred ----cc-------chHHHHHhcCCC-------------EEEeCCCcccccCCCCchHHHHHHH----cC---eEEEcC--
Q 025533 95 ----WV-------VTQEFLDKHQID-------------FVAHDSLPYADASGAGKDVYEFVKA----AG---KFKETK-- 141 (251)
Q Consensus 95 ----~~-------it~~~l~~~~iD-------------~vv~G~d~~~~~~~~g~d~y~~lk~----~G---~~~~~~-- 141 (251)
+. ++..+...++|. .++.|++.++|....+ ....+++ .| .++.+|
T Consensus 100 yp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~q--ql~~l~~m~~dl~~~V~iv~vp~v 177 (283)
T 3ag6_A 100 YPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQ--QLAIVEQMVKDFNHAVEIIGIDIV 177 (283)
T ss_dssp SCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHH--HHHHHHHHHHHTTCCCEEEEECCC
T ss_pred CCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCcc--CHHHHHHHHHHcCCeEEEEecCcE
Confidence 10 112223336777 7788888999864322 2334444 45 332233
Q ss_pred cc---CCCChHHH
Q 025533 142 RT---DGISTSDI 151 (251)
Q Consensus 142 rt---~giSTT~I 151 (251)
|. ..+||+.+
T Consensus 178 r~~dGlaiSSrn~ 190 (283)
T 3ag6_A 178 READGLAKSSRNV 190 (283)
T ss_dssp BCTTSCBCCGGGG
T ss_pred EeCCCCEecCCcc
Confidence 42 35788864
No 38
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=97.89 E-value=0.00018 Score=66.82 Aligned_cols=90 Identities=11% Similarity=-0.072 Sum_probs=59.1
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhc-cCc-c--cccc-CCCc
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC-KWV-D--EVIP-DAPW 95 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~-k~V-D--~Vi~-~~p~ 95 (251)
+.|++.|+|||+|.||..+.++|.+.. |.|++--...+ .| ..-.+.+.|++|++.+ ... + .|+. ..|+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~--d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~ 228 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELA--DGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLAT 228 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHS--SEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCS
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhC--CcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechH
Confidence 457889999999999999999999984 77665444433 13 2369999999999953 321 2 2221 1221
Q ss_pred ---------cchHHHH-HhcCCCEEEeCCCcc
Q 025533 96 ---------VVTQEFL-DKHQIDFVAHDSLPY 117 (251)
Q Consensus 96 ---------~it~~~l-~~~~iD~vv~G~d~~ 117 (251)
++-..++ +.+++.+++.|.|..
T Consensus 229 ~m~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 229 PMRYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred HhhcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 1222222 335889999998754
No 39
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=97.68 E-value=0.00013 Score=65.96 Aligned_cols=63 Identities=21% Similarity=0.288 Sum_probs=49.9
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccc-cC----CCCCCHHHHHHHHhhccCcccccc
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKF-KG----KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~-Kg----~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
..|.+.|+ +|.||+.++++|++.+ +.++|.+..+|. .+ ++ +.+.+.++|+++++.++ ||.++.
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a--~~vVvsff~nP~--qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~ 87 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARREN--PFVVVSVFVNPL--QFGPGEDYHRYPRDLERDRALLQEAG-VDLLFA 87 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHC--SEEEEEECCCGG--GCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEEC
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhC--CEEEEEEECCHH--HhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEe
Confidence 35789999 9999999999999996 656666665553 33 22 23899999999999998 998876
No 40
>1pei_A PEPC22; transferase, nucleotidyltransferase, repeat, phospholipid biosynthesis, membrane, phosphorylation; NMR {Rattus norvegicus} SCOP: j.14.1.1
Probab=97.29 E-value=5.6e-05 Score=44.62 Aligned_cols=18 Identities=11% Similarity=0.436 Sum_probs=14.0
Q ss_pred HHHHHHHhhhHHHHHHHH
Q 025533 216 HRNEWVENADRWVAGFLE 233 (251)
Q Consensus 216 ~~~~w~~~~~~~~~~f~~ 233 (251)
++++|+++|++||++||+
T Consensus 9 liskWe~kSre~I~~Fl~ 26 (26)
T 1pei_A 9 LIQKWEEKSREFIGSXXX 26 (26)
T ss_dssp HTTHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHcccC
Confidence 567999999999999984
No 41
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=97.07 E-value=0.0012 Score=60.21 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=45.2
Q ss_pred ccccCCCCHHHHHHHHHHhh-hCCCCeEEEEEecCccccccc-C----CCCCCHHHHHHHHhhccCcccccc
Q 025533 26 DGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFK-G----KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 26 ~G~FDlfH~GH~~~L~qAk~-~~~~d~LIVgV~sD~~~~~~K-g----~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
..++.-+|.||+.++++|++ .+ + +|.|+.++++..+- + +-+.+.++++++++.++ ||.++.
T Consensus 38 VpTmG~LH~GH~sLI~~A~~~~a--~--~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~ 104 (301)
T 3cov_A 38 VPTMGALHEGHLALVRAAKRVPG--S--VVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFT 104 (301)
T ss_dssp EEECSCCCHHHHHHHHHHHTSTT--E--EEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEEC
T ss_pred EecCCcccHHHHHHHHHHHHhcC--C--EEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEe
Confidence 34444499999999999999 75 5 44455555555552 2 13899999999999998 998886
No 42
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=96.77 E-value=0.0024 Score=57.82 Aligned_cols=64 Identities=17% Similarity=0.105 Sum_probs=48.6
Q ss_pred EEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCccccccc-C----CCCCCHHHHHHHHhhccCcccccc
Q 025533 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK-G----KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 23 V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~K-g----~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
|-+..+...+|.||+.++++|++.+ +.++|.+..+|. .+. + +-+.+.++++++++.++ ||.|+.
T Consensus 24 ig~VPTMG~LH~GH~sLi~~A~~~~--d~vVvSifvnP~--qf~~~ed~~~yprt~e~d~~ll~~~G-vD~vF~ 92 (283)
T 3uk2_A 24 TAFVPTMGNLHEGHLSLMRLARQHG--DPVVASIFVNRL--QFGPNEDFDKYPRTLQEDIEKLQKEN-VYVLFA 92 (283)
T ss_dssp CEEEEECSSCCHHHHHHHHHHHTTC--SSEEEEECCCGG--GSCTTSCTTTSCCCHHHHHHHHHTTT-CSEEEC
T ss_pred EEEECCCCcccHHHHHHHHHHHHhC--CEEEEEEcCCHH--HcCCcccccccCCCHHHHHHHHHHcC-CCEEEe
Confidence 3445599999999999999999986 666666665554 343 1 23789999999999887 887764
No 43
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=96.31 E-value=0.014 Score=53.57 Aligned_cols=65 Identities=17% Similarity=0.175 Sum_probs=49.3
Q ss_pred eEEE--EccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCccccccc---CCCCCCHHHHHHHHhhccCcccccc
Q 025533 21 VRVY--ADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK---GKTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 21 ~~V~--~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~K---g~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
++++ +.| .+|.||+.++++|++.+ |.+||.|.-+|.-.--. .+-+-++++.+++++..+ ||.|+.
T Consensus 44 ~IgfVPTMG---~LH~GHlsLi~~A~~~~--d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~G-vD~vF~ 113 (314)
T 3inn_A 44 KIGFVPTMG---YLHKGHLELVRRARVEN--DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQ-VDYLFA 113 (314)
T ss_dssp CEEEEEECS---SCCHHHHHHHHHHHHHC--SEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHTT-CSEEEC
T ss_pred eEEEEcCCC---ccCHHHHHHHHHHHHhC--CEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhCC-CCEEEC
Confidence 4556 667 59999999999999995 88899998887522111 012688999999999887 887764
No 44
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.26 E-value=0.0072 Score=54.79 Aligned_cols=63 Identities=22% Similarity=0.208 Sum_probs=46.8
Q ss_pred eEEE--EccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCccccccc-C----CCCCCHHHHHHHHhhccCcccccc
Q 025533 21 VRVY--ADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK-G----KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 21 ~~V~--~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~K-g----~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
++++ +.|. +|.||+.++++|++.+ |.+||+|.-+|.- +- + +-+-++++=+++++..+ ||.|+.
T Consensus 26 ~IgfVPTMG~---LH~GHlsLv~~Ar~~~--d~vVVSIFVNP~Q--F~~~EDl~~YPRtle~D~~~l~~~g-vd~vF~ 95 (287)
T 3q12_A 26 RIALVPTMGN---LHEGHMTLVDEAKTRA--DVVVVTIFVNPLQ--FERPDDLAHYPRTLQEDCEKLTRHG-ADLVFA 95 (287)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTS--SEEEEEECCCGGG--CSSHHHHHHSCCCHHHHHHHHHHHT-CSEEEC
T ss_pred eEEEEcCCCc---ccHHHHHHHHHHHHhC--CEEEEEeccCccc--CCCcchhhcCCCCHHHHHHHHHHCC-CCEEEC
Confidence 4566 7785 9999999999999995 8999999988752 21 0 11466777778888776 776654
No 45
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=95.01 E-value=0.046 Score=49.44 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEEecCccccccc---CCCCCCHHHHHHHHhhccCcccccc
Q 025533 31 LFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK---GKTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 31 lfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~K---g~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
-+|-||+.++++|++ + |.+||.|.-+|.-..-. .+-+-++++=+++++..+ ||.|+.
T Consensus 35 aLH~GHlsLv~~Ar~-~--d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~g-vD~vF~ 94 (285)
T 3mxt_A 35 FLHDGHLSLVKHAKT-Q--DKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNG-VDMVFI 94 (285)
T ss_dssp SCCHHHHHHHHHHTT-S--SEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHTT-CSEEEC
T ss_pred cccHHHHHHHHHHHh-C--CEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHCC-CCEEEC
Confidence 499999999999999 6 88999998887521111 012567777788888876 776654
No 46
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=94.89 E-value=0.62 Score=43.81 Aligned_cols=90 Identities=11% Similarity=-0.018 Sum_probs=52.3
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhcc--Cc-ccccc---CCC
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--WV-DEVIP---DAP 94 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k--~V-D~Vi~---~~p 94 (251)
+.|++..+.+|+|.||.+++.+|+... ++.|+|- +..-..| .-=.+.+-|+++.+.+- +. +.|++ +.+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~-~~~lllh----PlvG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~ 261 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREA-NAKVLIH----PVVGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 261 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHT-TCEEEEC----CBCSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCB
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHc-CCcEEEE----ECCCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecchh
Confidence 358889999999999976666665442 3444321 2221122 12478999998888652 21 22322 222
Q ss_pred c---cch----HH-HHHhcCCCEEEeCCCc
Q 025533 95 W---VVT----QE-FLDKHQIDFVAHDSLP 116 (251)
Q Consensus 95 ~---~it----~~-~l~~~~iD~vv~G~d~ 116 (251)
+ +.. .. +-+.+++.++++|-|.
T Consensus 262 mryAGPrEai~HAiiRkN~GcthfIVGRDh 291 (395)
T 1r6x_A 262 MRMSGDREAVWHAIIRKNYGASHFIVGRDH 291 (395)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred hhhcCcHHHHHHHHHHHHcCCceEEECCCC
Confidence 1 112 22 3345799999999864
No 47
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=94.83 E-value=0.54 Score=45.50 Aligned_cols=89 Identities=11% Similarity=-0.024 Sum_probs=52.2
Q ss_pred eEEEEccccCCCCHHHHHHHHHHh-hhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhcc--Cc-ccccc-CCCc
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAK-KSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--WV-DEVIP-DAPW 95 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk-~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k--~V-D~Vi~-~~p~ 95 (251)
+.|++..+++|+|.||.+++.++. +.. +.|+|--.--+ .| .-=.+.+-|+++.+.+- |. +.|++ .-|+
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~--~~lll~pl~g~----~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~ 261 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREAN--AKVLIHPVVGL----TK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPL 261 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHT--CEEEEEEBCSB----CS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcC--CcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecch
Confidence 357889999999999976665555 544 44433222111 12 12478999998888652 21 22332 1222
Q ss_pred c-----ch----HH-HHHhcCCCEEEeCCCc
Q 025533 96 V-----VT----QE-FLDKHQIDFVAHDSLP 116 (251)
Q Consensus 96 ~-----it----~~-~l~~~~iD~vv~G~d~ 116 (251)
. .. .. +-+.+++.++++|-|.
T Consensus 262 ~m~yaGprea~~hai~r~n~G~th~IvGrdh 292 (511)
T 1g8f_A 262 AMRMSGDREAVWHAIIRKNYGASHFIVGRDH 292 (511)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEECCTTT
T ss_pred hhhccCcHHHHHHHHHHHhCCCceEEeCCCC
Confidence 1 12 22 3345799999999764
No 48
>1peh_A Pepnh1; transferase, nucleotidyltransferase, repeat, phospholipid biosynthesis, membrane, phosphorylation; NMR {Rattus norvegicus} SCOP: j.14.1.1
Probab=94.15 E-value=0.00045 Score=43.03 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 025533 181 VKEKRLRVNMKLKKLQEKVKQQQERVGEKIQTVA 214 (251)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (251)
+.|+++.+|+.+++++++++++.++++++++.|+
T Consensus 1 InEKky~lQ~~VDk~K~kvk~VEeksK~~V~~vE 34 (35)
T 1peh_A 1 XNEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVE 34 (35)
T ss_dssp -CCTTTCCSSSTTGGGGGTTGGGTTTHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcc
Confidence 3578999999999999999999999998887664
No 49
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=94.14 E-value=0.12 Score=46.32 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=46.5
Q ss_pred EEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccC-----CCCCCHHHHHHHHhhccCcccccc
Q 025533 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-----KTVMTEDERYESLRHCKWVDEVIP 91 (251)
Q Consensus 22 ~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg-----~pv~s~~ER~e~l~~~k~VD~Vi~ 91 (251)
+++++ +---+|-||+.++++|++.+ |.+||.|.-+|.- +-. +-+-+.++=+++++..+ ||.|+.
T Consensus 26 ig~VP-TMGaLH~GHlsLv~~Ar~~~--d~vVVSIFVNP~Q--F~~~EDl~~YPRtle~D~~ll~~~g-vD~vF~ 94 (264)
T 3n8h_A 26 IGFVP-TMGALHNGHISLIKKAKSEN--DVVIVSIFVNPTQ--FNNPNDYQTYPNQLQQDIQILASLD-VDVLFN 94 (264)
T ss_dssp EEEEE-ECSSCCHHHHHHHHHHHHHC--SEEEEEECCCGGG--CSCHHHHHHSCCCHHHHHHHHHHTT-CSEEEC
T ss_pred EEEEC-CCcchhHHHHHHHHHHHHhC--CEEEEEEccCccc--CCCcchhhcCCCCHHHHHHHHHHCC-CCEEEC
Confidence 44444 56689999999999999995 8899999888752 210 11466777778888776 776654
No 50
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=93.85 E-value=0.055 Score=52.61 Aligned_cols=88 Identities=11% Similarity=-0.073 Sum_probs=54.4
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhh-hCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhc--cC--cccccc---C
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC--KW--VDEVIP---D 92 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~-~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~--k~--VD~Vi~---~ 92 (251)
+.|++.=+++|+|.||..++++|.. .+ +.|+|-...-. .| ..-.+.+-|++.++.+ .| -+.|++ +
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~--~~llv~p~~g~----~k-~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p 236 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVG--GGLLLHPVVGL----TK-PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLP 236 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHT--SEEEECCBCSB----CC-TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcC--CcEEEEeCcCC----CC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecC
Confidence 3577888999999999999999996 55 55554322221 12 1257899999888865 11 123322 2
Q ss_pred CC-------ccchHH-HHHhcCCCEEEeCCC
Q 025533 93 AP-------WVVTQE-FLDKHQIDFVAHDSL 115 (251)
Q Consensus 93 ~p-------~~it~~-~l~~~~iD~vv~G~d 115 (251)
.+ +.+... +-+.+++..+++|-|
T Consensus 237 ~~m~~agprea~~ha~ir~n~G~th~ivgrd 267 (546)
T 2gks_A 237 LAMRMAGPREALWHGIIRRNYGATHFIVGRD 267 (546)
T ss_dssp CBCCCCTHHHHHHHHHHHHHTTCSEEEECTT
T ss_pred chhhccCchHHHHHHHHHHhCCCCeEEECCC
Confidence 12 112223 335578888888854
No 51
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=92.12 E-value=0.2 Score=48.89 Aligned_cols=89 Identities=12% Similarity=0.005 Sum_probs=54.0
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhc--cCc-ccccc---CCC
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC--KWV-DEVIP---DAP 94 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~--k~V-D~Vi~---~~p 94 (251)
+.|++.=+++|+|.||..++++|.... ++.|+|-...- ..| ..-.+.+-|++.++.+ .+. +.|+. +.+
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~-~~~llv~pl~g----~~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~ 264 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSR-QANVLIHPVVG----LTK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLA 264 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHT-TCEEEECCBCC----CCC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhc-CCcEEEEeCCC----CCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCch
Confidence 346778899999999999999998662 25554432111 112 1246889999888875 121 22322 222
Q ss_pred c--c------chHHHHHhcCCCEEEeCCC
Q 025533 95 W--V------VTQEFLDKHQIDFVAHDSL 115 (251)
Q Consensus 95 ~--~------it~~~l~~~~iD~vv~G~d 115 (251)
+ . ....+.+.+++.++++|-|
T Consensus 265 m~~agprea~~ha~ir~n~G~th~ivgrd 293 (573)
T 1m8p_A 265 MRMGGPREAIWHAIIRKNHGATHFIVGRD 293 (573)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCSEEEECTT
T ss_pred hhccCchHHHHHHHHHHHCCCCeEEECCC
Confidence 1 1 1233445678989998854
No 52
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=88.07 E-value=2.9 Score=33.10 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcccCCCC
Q 025533 180 YVKEKRLRVNMKLKKLQEKVKQQQERVG----EKIQTVAMHRNEWVENADRWVAGFLEMFEEGCHKMPS 244 (251)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~w~~~~~~~~~~f~~~~~~~~~~~~~ 244 (251)
-+...+.+|+..|..+++++..+..... .....+..|+.+|++-|+.-..--...+......|+.
T Consensus 4 ~L~~~~~~L~~~i~~l~~~L~~lkqa~k~~~~~~~~eL~~LI~KWr~asq~aaeeLf~~~~~rv~rMGG 72 (122)
T 3viq_A 4 QLLSRRLKLEKEVRNLQEQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIRLAGG 72 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3567788888899999988887654321 1223456699999999998777666666555555543
No 53
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=84.84 E-value=7.1 Score=37.86 Aligned_cols=89 Identities=9% Similarity=-0.093 Sum_probs=51.1
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhhhCCCCeEEEEEecCcccccccCCCCCCHHHHHHHHhhcc--Cc-ccccc---CCC
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--WV-DEVIP---DAP 94 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k--~V-D~Vi~---~~p 94 (251)
+.|++.=+-+|+|.||.+++++|.... ++.|+| .+.+-..| .-=.+.+-|++..+.+- |. +.|+. +.+
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~-~~~lll----~pl~g~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~ 237 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIEN-EANLLL----HPQVGGDI-TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAP 237 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHT-TCEEEE----CCBCCCCT-TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSC
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhc-CCeEEE----EeccCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEeecchh
Confidence 346777899999999999999998432 354433 22221122 12578899998888652 21 23321 222
Q ss_pred c---cch-----HHHHHhcCCCEEEeCCC
Q 025533 95 W---VVT-----QEFLDKHQIDFVAHDSL 115 (251)
Q Consensus 95 ~---~it-----~~~l~~~~iD~vv~G~d 115 (251)
+ +.. .-+-+.+++.++++|-|
T Consensus 238 m~~agprea~~ha~~r~n~G~th~ivGrd 266 (552)
T 3cr8_A 238 PPEASGRALLLRAIVARNFGCSLLIAGGE 266 (552)
T ss_dssp CCCSCSHHHHHHHHHHHHHTCSEEEC---
T ss_pred hcccCcHHHHHHHHHHHhCCCCeeeeCCC
Confidence 1 112 22334579999999975
No 54
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=73.99 E-value=5 Score=23.90 Aligned_cols=24 Identities=33% Similarity=0.710 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHH
Q 025533 189 NMKLKKLQEKVKQQQERVGEKIQT 212 (251)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~ 212 (251)
.+.+.++++|+++...++|++++-
T Consensus 3 rkrlrkfrnkikeklkkigqkiqg 26 (32)
T 1lyp_A 3 RKRLRKFRNKIKEKLKKIGQKIQG 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677888888888888888874
No 55
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=64.87 E-value=22 Score=35.08 Aligned_cols=91 Identities=16% Similarity=0.066 Sum_probs=54.0
Q ss_pred eEEEEccccCCCCHHHHHHHHHHhh-hCC----CCeEEEEEecCcccccccCCCCCCHHHHHHHHhhcc---Cc--cccc
Q 025533 21 VRVYADGIYDLFHFGHARSLEQAKK-SFP----NTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK---WV--DEVI 90 (251)
Q Consensus 21 ~~V~~~G~FDlfH~GH~~~L~qAk~-~~~----~d~LIVgV~sD~~~~~~Kg~pv~s~~ER~e~l~~~k---~V--D~Vi 90 (251)
+.|++.=+-+|+|.||-.+++.|.+ ..+ ++.|+|- |.+-..| .-=.+.+-|++..+.+- |. +.|+
T Consensus 413 ~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~----pl~G~tk-~~di~~~~r~~~~~~~~~~~y~p~~~~~ 487 (630)
T 1x6v_B 413 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLH----PLGGWTK-DDDVPLMWRMKQHAAVLEEGVLNPETTV 487 (630)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEE----EBCSCCC-TTSCCHHHHHHHHHHHHHTTSSCGGGEE
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEE----eCcCCCC-CCCCCHHHHHHHHHHHHHcCCCCCcceE
Confidence 4577788999999999999998886 331 1224322 1111112 12578999998888652 22 3343
Q ss_pred c---CCCcc---chH----H-HHHhcCCCEEEeCCCc
Q 025533 91 P---DAPWV---VTQ----E-FLDKHQIDFVAHDSLP 116 (251)
Q Consensus 91 ~---~~p~~---it~----~-~l~~~~iD~vv~G~d~ 116 (251)
+ +.++- ... . +-+.+++.++++|-|+
T Consensus 488 l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdh 524 (630)
T 1x6v_B 488 VAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDP 524 (630)
T ss_dssp ECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSST
T ss_pred EeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCC
Confidence 2 22221 222 2 3345799999999864
No 56
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=61.55 E-value=68 Score=28.27 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=7.9
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEccc
Q 025533 4 ANSNNSNSTDTAPSDRPVRVYADGI 28 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~r~~~V~~~G~ 28 (251)
.|+||+..+.++...++.++.+.|+
T Consensus 11 ~~~~~~~~~~~~~~m~~~rigiIG~ 35 (350)
T 3rc1_A 11 ENLYFQGHMENPANANPIRVGVIGC 35 (350)
T ss_dssp ---------------CCEEEEEESC
T ss_pred cceeeeccCCCCCCCCceEEEEEcC
Confidence 4677877777777777777888886
No 57
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=38.80 E-value=43 Score=30.82 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=24.7
Q ss_pred CCCeEEEEcccc--CCCCHHHHH------HHHHHhhhCCCCeE--EEEEe
Q 025533 18 DRPVRVYADGIY--DLFHFGHAR------SLEQAKKSFPNTYL--LVGCC 57 (251)
Q Consensus 18 ~r~~~V~~~G~F--DlfH~GH~~------~L~qAk~~~~~d~L--IVgV~ 57 (251)
++.+.+|+.|-+ +++|+||++ +|.+.+++. |-.+ +.|++
T Consensus 37 ~~~v~~y~~gPt~yg~~HiGHar~~v~~DvlaR~lr~~-G~~V~~~~~~d 85 (414)
T 3c8z_A 37 GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDA-GHTVQYVQNVT 85 (414)
T ss_dssp CSEEEEEECCCCTTSCCBHHHHHHHHHHHHHHHHHHHT-TCEEEEEEEEC
T ss_pred CCCceEEeCCCcCCCCcCccccHHHHHHHHHHHHHHHc-CCCEEeCCCCC
Confidence 344567888866 999999996 345555554 3444 44443
No 58
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=36.71 E-value=46 Score=21.66 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=4.6
Q ss_pred HHHHhhhHHHHHHHHH
Q 025533 219 EWVENADRWVAGFLEM 234 (251)
Q Consensus 219 ~w~~~~~~~~~~f~~~ 234 (251)
--++++.+|+.+|...
T Consensus 26 vLE~NAeeFV~~fVQK 41 (44)
T 3m91_B 26 VLEENAEDFVRAYVQK 41 (44)
T ss_dssp HHHHTC----------
T ss_pred HHHHhHHHHHHHHHHc
Confidence 4678999999999863
No 59
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii}
Probab=35.20 E-value=21 Score=34.00 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=24.5
Q ss_pred CCCeEEEEcc--ccCCCCHHHHHH------HHHHhhhCCCCeEEEEEe
Q 025533 18 DRPVRVYADG--IYDLFHFGHARS------LEQAKKSFPNTYLLVGCC 57 (251)
Q Consensus 18 ~r~~~V~~~G--~FDlfH~GH~~~------L~qAk~~~~~d~LIVgV~ 57 (251)
+..+..|+.| .+|.+|+||++- |.+.+++. |..+.-..+
T Consensus 23 ~~~v~~YvcGPtvy~~~HIGHaR~~v~~Dvl~R~lr~~-Gy~V~~v~n 69 (462)
T 3tqo_A 23 SGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMR-GYEVTFVRN 69 (462)
T ss_dssp TTEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCeEEEEeCCCcCCCCCchhhhHHHHHHHHHHHHHHHc-CCceEEecC
Confidence 4456677777 799999999863 34555554 344433333
No 60
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=32.82 E-value=89 Score=29.17 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 025533 179 SYVKEKRLRVNMKLKKLQEKVKQQQERVGEKIQTVAMHRNEWV 221 (251)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 221 (251)
+-|.+..-.+++.|++|++.|...+....+-.+++..+.+.|+
T Consensus 56 g~Ldk~er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk 98 (390)
T 1deq_A 56 GLIDEVDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMR 98 (390)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3344444555566666666666555444443333333333343
No 61
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=32.76 E-value=23 Score=33.36 Aligned_cols=21 Identities=48% Similarity=0.767 Sum_probs=16.4
Q ss_pred CCCeEEEEcccc--CCCCHHHHH
Q 025533 18 DRPVRVYADGIY--DLFHFGHAR 38 (251)
Q Consensus 18 ~r~~~V~~~G~F--DlfH~GH~~ 38 (251)
+..+.+|+.|-- +++|+||++
T Consensus 20 ~~~v~~yv~gPt~y~~~HiGHar 42 (461)
T 1li5_A 20 AGEVGMYVCGITVYDLCHIGHGR 42 (461)
T ss_dssp TTEEEEEECCCBSSSCCBHHHHH
T ss_pred CCCeeEEEcCCcCCCCCcccccH
Confidence 444677888854 999999996
No 62
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=28.06 E-value=49 Score=25.09 Aligned_cols=40 Identities=13% Similarity=0.282 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHh--hhHHHHHHHHHHHhcccCCCCccc
Q 025533 208 EKIQTVAMHRNEWVEN--ADRWVAGFLEMFEEGCHKMPSGIE 247 (251)
Q Consensus 208 ~~~~~~~~~~~~w~~~--~~~~~~~f~~~~~~~~~~~~~~~~ 247 (251)
++++..+.|+.+|+.. ..+|-..++++|+...-.....++
T Consensus 32 ~ElqqFA~Llr~YR~G~~I~~Fc~kLl~LyG~~Rk~LL~gmR 73 (98)
T 4fqn_A 32 QEIQQFAALLHEYRNGASIHEFCINLRQLYGDSRKFLLLGLR 73 (98)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCGGGGGGGGGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHhchHHHHHHhhcc
Confidence 3556666677888864 468888999999876665555554
No 63
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=26.33 E-value=1.1e+02 Score=29.00 Aligned_cols=41 Identities=22% Similarity=0.231 Sum_probs=21.7
Q ss_pred CCeEEEEccc-c--CCCCHHHHHH------HHHHhhhCCCCeEEEEEecCc
Q 025533 19 RPVRVYADGI-Y--DLFHFGHARS------LEQAKKSFPNTYLLVGCCNDE 60 (251)
Q Consensus 19 r~~~V~~~G~-F--DlfH~GH~~~------L~qAk~~~~~d~LIVgV~sD~ 60 (251)
+++..++... + +++|+||++- |.+.+++. |..+......|.
T Consensus 24 ~~~~~i~~p~pypng~lHiGH~r~~v~~D~laR~lr~~-G~~V~~~~g~dd 73 (536)
T 4dlp_A 24 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLN-GMDVYFLTGTDE 73 (536)
T ss_dssp CCEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHHHHHT-TCEEEEEEEECC
T ss_pred CCCEEEeCCCCCCCCCcCcchhHHHHHHHHHHHHHHhc-CCcEEEecCcCC
Confidence 3344444444 3 8999999853 34445554 344433333343
No 64
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=24.38 E-value=1e+02 Score=21.15 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=15.1
Q ss_pred CChHHHHHHHHH---hhHHHHHHHhhcCCCc
Q 025533 146 ISTSDIIMRIVK---DYNQYVMRNLDRGYSR 173 (251)
Q Consensus 146 iSTT~Ii~rI~~---~~~~y~~r~l~rg~~~ 173 (251)
-|..++..-+.. +...|+....+.+++-
T Consensus 6 Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G 36 (78)
T 3bs7_A 6 WTVSDVLKWYRRHCGEYTQYEQLFAQHDITG 36 (78)
T ss_dssp CCHHHHHHHHHHHSGGGGGGHHHHHHTTCCH
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHCCCCH
Confidence 345555555544 4555655555555554
No 65
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=23.15 E-value=1.3e+02 Score=17.96 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=14.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025533 179 SYVKEKRLRVNMKLKKLQEKVKQQQER 205 (251)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (251)
|-+.|.--+++.-+++|++++....+.
T Consensus 2 srlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 2 SRLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555666666666655544
No 66
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=22.47 E-value=8.2 Score=24.49 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=14.2
Q ss_pred HHHHHHHhcccCCCCccccCCC
Q 025533 230 GFLEMFEEGCHKMPSGIEFKSD 251 (251)
Q Consensus 230 ~f~~~~~~~~~~~~~~~~~~~~ 251 (251)
.|+..|++...-|+.|+...||
T Consensus 14 ~F~~F~~rsskviERAL~e~yD 35 (38)
T 3l9k_W 14 NFQRFVVRAGRVIERALSENVD 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHccccc
Confidence 4566666666666666666665
No 67
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=21.73 E-value=48 Score=31.60 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=22.3
Q ss_pred CCCeEEEEcc-cc--CCCCHHHHHH------HHHHhhhCCCCeEEEEEecC
Q 025533 18 DRPVRVYADG-IY--DLFHFGHARS------LEQAKKSFPNTYLLVGCCND 59 (251)
Q Consensus 18 ~r~~~V~~~G-~F--DlfH~GH~~~------L~qAk~~~~~d~LIVgV~sD 59 (251)
++++..++.+ -+ +++|+||++- |.+.+++. |-.+......|
T Consensus 16 ~~~~~~v~~~~py~ng~lHiGH~r~~v~~D~laR~~r~~-G~~V~~~~g~D 65 (560)
T 3h99_A 16 VAKKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMR-GHEVNFICADD 65 (560)
T ss_dssp -CCEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHT-TCEEEEEEEEB
T ss_pred CCCcEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHHHHc-CCeEEEeeeec
Confidence 4444455555 55 8999999863 33444554 34443333344
No 68
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A*
Probab=21.30 E-value=98 Score=28.03 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=21.0
Q ss_pred CCCeEEEEccccCC---CCHHHHH-HHHHHhhhCCCCeEEEEEec
Q 025533 18 DRPVRVYADGIYDL---FHFGHAR-SLEQAKKSFPNTYLLVGCCN 58 (251)
Q Consensus 18 ~r~~~V~~~G~FDl---fH~GH~~-~L~qAk~~~~~d~LIVgV~s 58 (251)
.++.++|+. ||| +|+||.- .|.....+-..-..++.|..
T Consensus 20 ~~~~~vysG--~~PTG~lHLGn~~g~l~~~~~lQ~~~~~~~~IaD 62 (351)
T 1yi8_B 20 PARPRVLTG--DRPTGALHLGHLAGSLQNRVRLQDEAELFVLLAD 62 (351)
T ss_dssp -CCSEEEEE--ECCSSCCBHHHHHHTHHHHHHHTSSSEEEEEECH
T ss_pred CCCcEEEEe--eCCCCCccHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 334455553 544 9999976 66666443222234555544
No 69
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=20.39 E-value=1.8e+02 Score=21.35 Aligned_cols=51 Identities=16% Similarity=0.314 Sum_probs=32.6
Q ss_pred HHHHHhcCCCEEEeCCCcccccCCCCchHHHHHHHcCeEEEcCccCCCChHHHHHHHHHh
Q 025533 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKD 158 (251)
Q Consensus 99 ~~~l~~~~iD~vv~G~d~~~~~~~~g~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~ 158 (251)
..+|...++|+|+.|.. |...+..|++.|.-++.. ..+.+-.+.+++++++
T Consensus 60 ~~~l~~~gv~~vi~~~i--------G~~a~~~L~~~GI~v~~~-~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 60 AQVLAKSGAGVLLTGYV--------GPKAFQALQAAGIKVGQD-LEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHTEEEEECSCC--------CHHHHHHHHHTTCEEECC-CTTSBHHHHHHHHHTT
T ss_pred HHHHHHCCCCEEEECCC--------CHhHHHHHHHCCCEEEEc-CCCCcHHHHHHHHHcC
Confidence 46777789999998852 445788899999433321 1234556666665543
No 70
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=20.29 E-value=95 Score=22.69 Aligned_cols=44 Identities=16% Similarity=0.081 Sum_probs=33.5
Q ss_pred CCCCeEEEEccccCCCCHHHHHHHHHHhhhCCCCeE-EEEEecCc
Q 025533 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYL-LVGCCNDE 60 (251)
Q Consensus 17 ~~r~~~V~~~G~FDlfH~GH~~~L~qAk~~~~~d~L-IVgV~sD~ 60 (251)
.++++.+++.+++-+.-.-.+..|.+..+.++...+ +|+|+.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~ 75 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE 75 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC
Confidence 456778888888888777777778888777654434 99999985
No 71
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=20.23 E-value=2.3e+02 Score=22.08 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=26.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 025533 175 DLGVSYVKEKRLRVNMKLKKLQEKVKQQQERVGEKIQTVAMHRNE 219 (251)
Q Consensus 175 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (251)
.|+.|.-++ +-+-+..+++|+..++..-.++.+....++.|+..
T Consensus 57 tL~~SL~~e-kaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~ 100 (121)
T 3mq7_A 57 ALMASLDAE-KAQGQKKVEELEGEITTLNHKLQDASAEVERLRRE 100 (121)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455563333 33336678888888887777666666555554443
Done!