Query 025534
Match_columns 251
No_of_seqs 243 out of 2342
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:18:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025534.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025534hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 1.6E-49 5.4E-54 347.8 20.0 218 27-250 9-227 (294)
2 1iy9_A Spermidine synthase; ro 100.0 2.1E-40 7.1E-45 289.4 23.7 216 29-249 2-217 (275)
3 3adn_A Spermidine synthase; am 100.0 6.1E-41 2.1E-45 295.4 17.0 215 29-249 11-226 (294)
4 3c6k_A Spermine synthase; sper 100.0 1.1E-40 3.9E-45 299.9 17.5 221 19-246 122-355 (381)
5 2i7c_A Spermidine synthase; tr 100.0 1.7E-38 5.8E-43 278.3 23.5 216 29-249 3-220 (283)
6 2o07_A Spermidine synthase; st 100.0 4.4E-38 1.5E-42 278.4 21.4 224 20-248 11-236 (304)
7 1uir_A Polyamine aminopropyltr 100.0 7.4E-38 2.5E-42 278.0 21.9 220 27-249 2-224 (314)
8 1mjf_A Spermidine synthase; sp 100.0 1.2E-37 4.3E-42 272.5 22.8 213 29-249 2-221 (281)
9 1inl_A Spermidine synthase; be 100.0 1.4E-37 4.9E-42 274.0 23.0 219 27-249 14-233 (296)
10 2b2c_A Spermidine synthase; be 100.0 2E-37 6.9E-42 275.2 22.4 209 36-249 42-250 (314)
11 2pt6_A Spermidine synthase; tr 100.0 1E-36 3.5E-41 271.5 23.2 218 27-249 39-258 (321)
12 2qfm_A Spermine synthase; sper 100.0 4.7E-37 1.6E-41 275.4 19.9 219 20-247 106-339 (364)
13 3bwc_A Spermidine synthase; SA 100.0 6E-36 2E-40 264.6 23.5 222 23-249 11-239 (304)
14 2cmg_A Spermidine synthase; tr 100.0 1.6E-36 5.6E-41 263.0 17.4 200 30-250 1-200 (262)
15 1xj5_A Spermidine synthase 1; 100.0 2E-35 6.8E-40 264.4 23.6 217 26-247 42-261 (334)
16 3gjy_A Spermidine synthase; AP 100.0 2.7E-31 9.4E-36 235.2 18.8 185 55-249 29-227 (317)
17 3p9n_A Possible methyltransfer 99.7 1.6E-15 5.6E-20 123.7 14.3 109 101-220 43-154 (189)
18 3orh_A Guanidinoacetate N-meth 99.6 8E-16 2.7E-20 130.5 9.8 110 100-218 58-169 (236)
19 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.4E-14 4.7E-19 121.6 14.0 129 102-241 34-166 (218)
20 2ozv_A Hypothetical protein AT 99.6 4.8E-15 1.6E-19 127.5 10.0 132 101-243 35-187 (260)
21 3ntv_A MW1564 protein; rossman 99.6 9.1E-15 3.1E-19 123.4 11.2 104 102-218 71-175 (232)
22 3dr5_A Putative O-methyltransf 99.6 8E-15 2.7E-19 123.3 10.6 103 104-218 58-162 (221)
23 3tfw_A Putative O-methyltransf 99.6 2.6E-14 8.8E-19 122.0 12.7 105 102-219 63-170 (248)
24 1yzh_A TRNA (guanine-N(7)-)-me 99.6 5.7E-14 1.9E-18 116.7 14.5 130 101-241 40-172 (214)
25 2fpo_A Methylase YHHF; structu 99.6 2.1E-14 7.2E-19 118.8 11.0 106 102-220 54-161 (202)
26 3lpm_A Putative methyltransfer 99.6 2.5E-14 8.6E-19 122.6 11.7 127 102-240 49-190 (259)
27 2ift_A Putative methylase HI07 99.6 1.8E-14 6.2E-19 119.0 10.4 109 102-221 53-165 (201)
28 3u81_A Catechol O-methyltransf 99.5 5E-14 1.7E-18 117.8 13.1 107 102-219 58-170 (221)
29 2fca_A TRNA (guanine-N(7)-)-me 99.5 9.5E-14 3.2E-18 115.8 14.6 130 101-241 37-169 (213)
30 2esr_A Methyltransferase; stru 99.5 1.5E-14 5.3E-19 116.3 9.4 109 101-221 30-140 (177)
31 3c3p_A Methyltransferase; NP_9 99.5 2.8E-14 9.6E-19 118.2 11.1 103 102-218 56-159 (210)
32 3duw_A OMT, O-methyltransferas 99.5 3.2E-14 1.1E-18 118.6 11.5 106 101-219 57-167 (223)
33 1sui_A Caffeoyl-COA O-methyltr 99.5 2.6E-14 8.8E-19 122.1 10.9 105 101-218 78-189 (247)
34 1dus_A MJ0882; hypothetical pr 99.5 1.6E-13 5.6E-18 110.7 15.1 128 101-246 51-178 (194)
35 4gek_A TRNA (CMO5U34)-methyltr 99.5 3E-14 1E-18 122.9 11.2 108 100-218 68-177 (261)
36 2fhp_A Methylase, putative; al 99.5 2.6E-14 9E-19 115.4 10.2 109 101-221 43-156 (187)
37 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.7E-13 5.8E-18 109.7 14.2 120 101-241 24-143 (178)
38 3mti_A RRNA methylase; SAM-dep 99.5 1.2E-13 4.2E-18 111.7 13.5 112 101-219 21-135 (185)
39 3c3y_A Pfomt, O-methyltransfer 99.5 2.7E-14 9.2E-19 121.1 9.7 106 101-219 69-181 (237)
40 3tr6_A O-methyltransferase; ce 99.5 3.4E-14 1.2E-18 118.6 9.8 105 102-219 64-174 (225)
41 4dzr_A Protein-(glutamine-N5) 99.5 2.2E-14 7.4E-19 118.0 8.5 134 101-244 29-186 (215)
42 3e05_A Precorrin-6Y C5,15-meth 99.5 1.9E-13 6.4E-18 112.6 13.9 120 101-241 39-158 (204)
43 4hg2_A Methyltransferase type 99.5 3E-14 1E-18 122.6 9.3 99 100-219 37-135 (257)
44 1ws6_A Methyltransferase; stru 99.5 6.8E-14 2.3E-18 111.2 10.6 104 102-221 41-149 (171)
45 3evz_A Methyltransferase; NYSG 99.5 8E-14 2.7E-18 116.7 11.5 129 101-241 54-196 (230)
46 3r3h_A O-methyltransferase, SA 99.5 9.8E-15 3.4E-19 124.4 5.9 104 102-218 60-169 (242)
47 3mb5_A SAM-dependent methyltra 99.5 1.9E-13 6.5E-18 116.2 13.5 124 101-247 92-219 (255)
48 3fpf_A Mtnas, putative unchara 99.5 8.8E-14 3E-18 121.7 11.6 103 99-219 119-222 (298)
49 2b78_A Hypothetical protein SM 99.5 1.3E-13 4.5E-18 125.1 13.1 130 101-236 211-346 (385)
50 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.3E-13 4.3E-18 117.1 12.0 133 101-240 45-183 (235)
51 2frn_A Hypothetical protein PH 99.5 1.5E-14 5.2E-19 125.6 6.4 125 101-242 124-248 (278)
52 1zx0_A Guanidinoacetate N-meth 99.5 8.3E-14 2.8E-18 117.4 10.4 109 101-218 59-169 (236)
53 1xdz_A Methyltransferase GIDB; 99.5 1.8E-13 6.1E-18 115.9 12.5 121 102-241 70-192 (240)
54 2igt_A SAM dependent methyltra 99.5 1.7E-13 5.7E-18 122.2 12.3 129 101-236 152-288 (332)
55 2b3t_A Protein methyltransfera 99.5 5.9E-13 2E-17 115.0 15.3 113 101-220 108-239 (276)
56 3eey_A Putative rRNA methylase 99.5 1.6E-13 5.4E-18 112.2 10.7 115 101-219 21-139 (197)
57 3njr_A Precorrin-6Y methylase; 99.5 6.1E-13 2.1E-17 110.2 14.4 117 101-241 54-170 (204)
58 3dlc_A Putative S-adenosyl-L-m 99.5 2.8E-13 9.4E-18 111.6 12.2 106 102-219 43-148 (219)
59 3g89_A Ribosomal RNA small sub 99.5 4.3E-13 1.5E-17 114.7 13.3 121 101-240 79-201 (249)
60 3kkz_A Uncharacterized protein 99.5 1.8E-13 6.1E-18 117.3 10.7 106 101-219 45-150 (267)
61 2avd_A Catechol-O-methyltransf 99.5 1.8E-13 6.3E-18 114.4 10.4 105 101-218 68-178 (229)
62 2gpy_A O-methyltransferase; st 99.5 1.7E-13 5.7E-18 115.3 9.3 104 102-218 54-159 (233)
63 3v97_A Ribosomal RNA large sub 99.5 5.8E-13 2E-17 129.4 14.1 117 102-222 539-660 (703)
64 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.9E-13 1.7E-17 113.6 12.0 117 102-219 49-173 (246)
65 3f4k_A Putative methyltransfer 99.4 2.9E-13 1E-17 114.8 10.1 106 101-219 45-150 (257)
66 3jwg_A HEN1, methyltransferase 99.4 3.8E-13 1.3E-17 111.7 10.2 109 101-218 28-140 (219)
67 4htf_A S-adenosylmethionine-de 99.4 5.4E-13 1.8E-17 115.3 11.3 107 101-219 67-173 (285)
68 3hem_A Cyclopropane-fatty-acyl 99.4 4.4E-13 1.5E-17 117.0 10.8 110 101-219 71-183 (302)
69 3cbg_A O-methyltransferase; cy 99.4 2.8E-13 9.6E-18 114.3 9.2 105 102-219 72-182 (232)
70 3jwh_A HEN1; methyltransferase 99.4 5.1E-13 1.7E-17 110.9 10.5 112 101-218 28-140 (217)
71 3c0k_A UPF0064 protein YCCW; P 99.4 1.9E-12 6.5E-17 117.7 15.2 134 101-241 219-360 (396)
72 4dmg_A Putative uncharacterize 99.4 1.9E-12 6.6E-17 117.8 15.0 111 102-222 214-329 (393)
73 1l3i_A Precorrin-6Y methyltran 99.4 3.3E-12 1.1E-16 102.8 14.8 119 101-241 32-150 (192)
74 3a27_A TYW2, uncharacterized p 99.4 2.7E-13 9.1E-18 117.4 8.6 124 101-242 118-241 (272)
75 1nv8_A HEMK protein; class I a 99.4 1.3E-12 4.3E-17 113.9 12.8 111 102-220 123-250 (284)
76 1nkv_A Hypothetical protein YJ 99.4 5E-13 1.7E-17 113.3 9.9 106 101-219 35-140 (256)
77 2hnk_A SAM-dependent O-methylt 99.4 4.3E-13 1.5E-17 113.3 9.5 105 102-219 60-181 (239)
78 3dtn_A Putative methyltransfer 99.4 3.4E-13 1.2E-17 113.0 8.7 106 101-219 43-148 (234)
79 1o54_A SAM-dependent O-methylt 99.4 1.1E-12 3.6E-17 113.4 11.0 118 101-241 111-229 (277)
80 1wxx_A TT1595, hypothetical pr 99.4 2E-12 6.7E-17 117.1 13.2 130 102-242 209-347 (382)
81 2as0_A Hypothetical protein PH 99.4 2.2E-12 7.7E-17 117.2 13.1 114 102-222 217-338 (396)
82 2gb4_A Thiopurine S-methyltran 99.4 8.7E-13 3E-17 113.1 9.7 110 101-217 67-189 (252)
83 4dcm_A Ribosomal RNA large sub 99.4 1.1E-12 3.9E-17 118.6 10.9 113 102-219 222-334 (375)
84 3grz_A L11 mtase, ribosomal pr 99.4 9.7E-13 3.3E-17 108.2 9.5 101 101-219 59-159 (205)
85 3hnr_A Probable methyltransfer 99.4 2.4E-12 8.3E-17 106.6 11.8 101 102-219 45-145 (220)
86 1vl5_A Unknown conserved prote 99.4 9.3E-13 3.2E-17 112.2 9.5 104 101-218 36-139 (260)
87 3ofk_A Nodulation protein S; N 99.4 6.9E-13 2.3E-17 109.8 8.4 105 101-219 50-154 (216)
88 1jsx_A Glucose-inhibited divis 99.4 8.3E-13 2.8E-17 108.6 8.8 102 102-220 65-166 (207)
89 1ve3_A Hypothetical protein PH 99.4 7.6E-13 2.6E-17 109.9 8.5 106 101-219 37-142 (227)
90 3ajd_A Putative methyltransfer 99.4 4.9E-12 1.7E-16 109.4 13.7 116 101-222 82-214 (274)
91 1yb2_A Hypothetical protein TA 99.4 1.5E-12 5.1E-17 112.5 10.3 117 101-241 109-227 (275)
92 3g07_A 7SK snRNA methylphospha 99.4 7.5E-13 2.6E-17 115.5 8.5 117 102-219 46-220 (292)
93 1pjz_A Thiopurine S-methyltran 99.4 3.3E-13 1.1E-17 111.6 5.8 107 101-214 21-135 (203)
94 2yvl_A TRMI protein, hypotheti 99.4 2.2E-12 7.6E-17 108.8 11.1 121 101-245 90-210 (248)
95 3g5t_A Trans-aconitate 3-methy 99.4 1.9E-12 6.5E-17 112.8 10.9 108 101-218 35-148 (299)
96 2yxd_A Probable cobalt-precorr 99.4 1.8E-11 6.2E-16 97.8 15.8 115 101-242 34-148 (183)
97 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.6E-12 8.8E-17 109.0 11.3 118 101-241 95-214 (258)
98 3dmg_A Probable ribosomal RNA 99.4 1.3E-12 4.5E-17 118.4 10.0 110 102-221 233-342 (381)
99 3lbf_A Protein-L-isoaspartate 99.4 1.9E-12 6.5E-17 106.7 10.1 101 101-221 76-176 (210)
100 3bus_A REBM, methyltransferase 99.4 2.2E-12 7.6E-17 110.4 10.8 107 101-219 60-166 (273)
101 3mgg_A Methyltransferase; NYSG 99.4 1.2E-12 4E-17 112.4 9.0 107 101-219 36-142 (276)
102 2b25_A Hypothetical protein; s 99.4 3.6E-12 1.2E-16 113.1 12.3 122 101-240 104-234 (336)
103 3k6r_A Putative transferase PH 99.4 5.9E-13 2E-17 115.8 6.5 102 101-219 124-225 (278)
104 3m6w_A RRNA methylase; rRNA me 99.4 7.1E-12 2.4E-16 116.2 13.9 134 101-244 100-250 (464)
105 2p7i_A Hypothetical protein; p 99.4 1.9E-12 6.6E-17 108.5 9.1 100 101-219 41-141 (250)
106 3ou2_A SAM-dependent methyltra 99.4 2.4E-12 8E-17 106.2 9.4 102 101-219 45-146 (218)
107 1xxl_A YCGJ protein; structura 99.4 6.5E-12 2.2E-16 105.9 12.3 105 101-219 20-124 (239)
108 1nt2_A Fibrillarin-like PRE-rR 99.4 1.5E-12 5.1E-17 108.5 8.0 104 101-219 56-161 (210)
109 2xvm_A Tellurite resistance pr 99.3 3.4E-12 1.2E-16 103.7 10.0 105 101-218 31-135 (199)
110 3kr9_A SAM-dependent methyltra 99.3 4.5E-12 1.5E-16 106.9 10.9 106 101-219 14-119 (225)
111 1i9g_A Hypothetical protein RV 99.3 6.7E-12 2.3E-16 108.0 12.2 119 101-240 98-218 (280)
112 1kpg_A CFA synthase;, cyclopro 99.3 3.3E-12 1.1E-16 110.4 10.2 106 101-219 63-168 (287)
113 2p35_A Trans-aconitate 2-methy 99.3 1.5E-12 5.1E-17 110.4 7.7 101 101-219 32-132 (259)
114 3g5l_A Putative S-adenosylmeth 99.3 2.3E-12 7.9E-17 109.2 8.8 102 102-219 44-145 (253)
115 1g8a_A Fibrillarin-like PRE-rR 99.3 3.4E-12 1.2E-16 106.7 9.7 104 101-219 72-178 (227)
116 1fbn_A MJ fibrillarin homologu 99.3 2.5E-12 8.6E-17 108.0 8.9 103 101-218 73-177 (230)
117 4hc4_A Protein arginine N-meth 99.3 2.7E-12 9.2E-17 116.0 9.6 105 102-217 83-187 (376)
118 3gu3_A Methyltransferase; alph 99.3 1.9E-12 6.7E-17 112.1 8.2 105 101-219 21-126 (284)
119 2bm8_A Cephalosporin hydroxyla 99.3 1.1E-12 3.7E-17 111.2 6.4 99 102-219 81-187 (236)
120 3vc1_A Geranyl diphosphate 2-C 99.3 2.5E-12 8.5E-17 112.9 8.9 106 101-219 116-221 (312)
121 3tma_A Methyltransferase; thum 99.3 3.6E-12 1.2E-16 114.0 9.9 113 101-219 202-317 (354)
122 1ixk_A Methyltransferase; open 99.3 1.4E-11 4.8E-16 108.8 13.5 115 101-221 117-248 (315)
123 3e8s_A Putative SAM dependent 99.3 8.1E-12 2.8E-16 103.3 11.3 100 101-220 51-153 (227)
124 3lcc_A Putative methyl chlorid 99.3 2.1E-12 7.2E-17 108.4 7.7 106 102-219 66-171 (235)
125 3dh0_A SAM dependent methyltra 99.3 1.5E-12 5.3E-17 107.7 6.8 107 101-219 36-143 (219)
126 2qm3_A Predicted methyltransfe 99.3 4.3E-12 1.5E-16 114.5 10.2 105 102-219 172-278 (373)
127 3h2b_A SAM-dependent methyltra 99.3 4.9E-12 1.7E-16 103.6 9.6 100 103-219 42-141 (203)
128 3dli_A Methyltransferase; PSI- 99.3 5E-12 1.7E-16 106.5 9.9 101 101-220 40-141 (240)
129 3pfg_A N-methyltransferase; N, 99.3 3.9E-12 1.3E-16 108.5 9.3 101 101-218 49-150 (263)
130 3ujc_A Phosphoethanolamine N-m 99.3 2.9E-12 9.9E-17 108.8 8.4 106 101-219 54-159 (266)
131 2yx1_A Hypothetical protein MJ 99.3 2.4E-12 8.2E-17 114.7 8.2 101 101-222 194-294 (336)
132 3ocj_A Putative exported prote 99.3 9.3E-13 3.2E-17 115.3 5.2 110 101-219 117-227 (305)
133 3r0q_C Probable protein argini 99.3 4.9E-12 1.7E-16 114.4 10.0 107 101-218 62-168 (376)
134 3lec_A NADB-rossmann superfami 99.3 8.1E-12 2.8E-16 105.6 10.7 106 101-219 20-125 (230)
135 3gdh_A Trimethylguanosine synt 99.3 1.3E-12 4.4E-17 110.1 5.8 103 102-218 78-180 (241)
136 2pxx_A Uncharacterized protein 99.3 5.9E-12 2E-16 103.4 9.7 110 101-219 41-159 (215)
137 3m70_A Tellurite resistance pr 99.3 3.9E-12 1.3E-16 109.9 8.9 103 102-218 120-222 (286)
138 2ex4_A Adrenal gland protein A 99.3 1.8E-12 6.2E-17 109.3 6.5 107 102-219 79-185 (241)
139 1o9g_A RRNA methyltransferase; 99.3 5.5E-13 1.9E-17 113.4 3.3 112 102-217 51-212 (250)
140 2o57_A Putative sarcosine dime 99.3 2.8E-12 9.7E-17 111.3 7.9 107 101-219 81-187 (297)
141 3axs_A Probable N(2),N(2)-dime 99.3 4.4E-12 1.5E-16 115.2 9.4 104 102-219 52-158 (392)
142 2fk8_A Methoxy mycolic acid sy 99.3 7.7E-12 2.6E-16 109.8 10.7 106 101-219 89-194 (318)
143 3q7e_A Protein arginine N-meth 99.3 4.4E-12 1.5E-16 113.5 9.2 107 102-218 66-172 (349)
144 3gnl_A Uncharacterized protein 99.3 9.7E-12 3.3E-16 106.0 10.6 106 101-219 20-125 (244)
145 4df3_A Fibrillarin-like rRNA/T 99.3 7.4E-12 2.5E-16 106.1 9.8 128 101-243 76-210 (233)
146 2ipx_A RRNA 2'-O-methyltransfe 99.3 3.7E-12 1.3E-16 107.1 8.0 104 101-219 76-182 (233)
147 4fsd_A Arsenic methyltransfera 99.3 4E-12 1.4E-16 115.0 8.6 112 101-219 82-203 (383)
148 2h00_A Methyltransferase 10 do 99.3 1.4E-12 4.8E-17 111.0 5.2 81 102-185 65-150 (254)
149 3l8d_A Methyltransferase; stru 99.3 8.6E-12 2.9E-16 104.6 9.6 102 101-219 52-153 (242)
150 3bkw_A MLL3908 protein, S-aden 99.3 7E-12 2.4E-16 105.1 9.1 103 101-219 42-144 (243)
151 3ccf_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.8E-16 106.7 10.6 100 101-220 56-155 (279)
152 3m33_A Uncharacterized protein 99.3 3.5E-12 1.2E-16 106.8 7.1 92 101-216 47-139 (226)
153 2nxc_A L11 mtase, ribosomal pr 99.3 1.5E-11 5E-16 105.3 11.1 118 101-243 119-237 (254)
154 3g2m_A PCZA361.24; SAM-depende 99.3 3.7E-12 1.3E-16 110.9 7.5 110 101-220 81-191 (299)
155 3i9f_A Putative type 11 methyl 99.3 4.7E-12 1.6E-16 100.8 7.4 97 101-219 16-112 (170)
156 2dul_A N(2),N(2)-dimethylguano 99.3 1E-11 3.4E-16 112.5 10.4 105 102-219 47-164 (378)
157 2yqz_A Hypothetical protein TT 99.3 5.8E-12 2E-16 106.9 8.3 104 101-219 38-141 (263)
158 2p8j_A S-adenosylmethionine-de 99.3 6.4E-12 2.2E-16 103.1 8.3 107 101-219 22-128 (209)
159 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.3E-11 7.9E-16 112.5 12.7 116 101-221 104-236 (456)
160 3p2e_A 16S rRNA methylase; met 99.3 1.8E-12 6E-17 109.2 4.7 111 101-217 23-137 (225)
161 1ri5_A MRNA capping enzyme; me 99.3 3.5E-12 1.2E-16 110.2 6.7 112 101-219 63-174 (298)
162 1dl5_A Protein-L-isoaspartate 99.3 8.5E-12 2.9E-16 110.1 9.2 103 101-221 74-177 (317)
163 1xtp_A LMAJ004091AAA; SGPP, st 99.3 7.5E-12 2.6E-16 105.7 8.5 106 101-219 92-197 (254)
164 2pjd_A Ribosomal RNA small sub 99.3 3E-12 1E-16 114.2 6.3 108 102-220 196-304 (343)
165 2fyt_A Protein arginine N-meth 99.3 1.4E-11 4.8E-16 109.9 10.5 106 101-216 63-168 (340)
166 1y8c_A S-adenosylmethionine-de 99.3 1E-11 3.5E-16 104.1 9.0 106 101-219 36-142 (246)
167 3q87_B N6 adenine specific DNA 99.3 2.6E-11 8.8E-16 97.4 10.9 99 101-219 22-123 (170)
168 3thr_A Glycine N-methyltransfe 99.3 6.6E-12 2.3E-16 108.6 7.7 114 102-219 57-175 (293)
169 3sm3_A SAM-dependent methyltra 99.3 1.5E-11 5.1E-16 102.3 9.5 112 101-219 29-141 (235)
170 3id6_C Fibrillarin-like rRNA/T 99.3 2E-11 6.7E-16 103.5 10.3 125 101-240 75-205 (232)
171 1wy7_A Hypothetical protein PH 99.3 1.9E-10 6.6E-15 94.3 16.0 101 101-218 48-148 (207)
172 2kw5_A SLR1183 protein; struct 99.3 1.1E-11 3.9E-16 101.3 8.4 100 105-219 32-131 (202)
173 2y1w_A Histone-arginine methyl 99.3 2.7E-11 9.1E-16 108.4 11.4 105 102-218 50-154 (348)
174 2qy6_A UPF0209 protein YFCK; s 99.3 1.9E-11 6.7E-16 105.0 9.8 114 102-219 60-213 (257)
175 3d2l_A SAM-dependent methyltra 99.3 8.7E-12 3E-16 104.5 7.4 104 101-219 32-137 (243)
176 2vdw_A Vaccinia virus capping 99.3 1.4E-11 4.9E-16 108.2 9.1 113 102-219 48-169 (302)
177 2yxe_A Protein-L-isoaspartate 99.3 2.1E-11 7.3E-16 100.7 9.5 103 101-221 76-179 (215)
178 1wzn_A SAM-dependent methyltra 99.3 1.2E-11 4.2E-16 104.5 8.3 106 101-219 40-145 (252)
179 3ggd_A SAM-dependent methyltra 99.2 1.1E-11 3.7E-16 104.6 7.9 105 101-219 55-163 (245)
180 1r18_A Protein-L-isoaspartate( 99.2 1.2E-11 4E-16 103.5 8.0 108 101-222 83-197 (227)
181 3e23_A Uncharacterized protein 99.2 8.9E-12 3E-16 102.8 7.1 100 101-219 42-141 (211)
182 1g6q_1 HnRNP arginine N-methyl 99.2 2.5E-11 8.7E-16 107.6 10.4 106 102-217 38-143 (328)
183 2frx_A Hypothetical protein YE 99.2 6.1E-11 2.1E-15 110.5 13.3 116 102-222 117-249 (479)
184 1vbf_A 231AA long hypothetical 99.2 3.1E-11 1.1E-15 100.8 10.0 98 101-220 69-166 (231)
185 3dou_A Ribosomal RNA large sub 99.2 1.8E-11 6.1E-16 100.5 8.4 124 101-248 24-162 (191)
186 2gs9_A Hypothetical protein TT 99.2 2.9E-11 9.8E-16 99.5 9.5 98 101-219 35-132 (211)
187 1ne2_A Hypothetical protein TA 99.2 5.9E-11 2E-15 97.1 11.3 96 101-217 50-145 (200)
188 2pbf_A Protein-L-isoaspartate 99.2 1.6E-11 5.5E-16 102.4 7.9 107 101-220 79-194 (227)
189 3cgg_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 96.2 10.3 103 101-220 45-148 (195)
190 3bgv_A MRNA CAP guanine-N7 met 99.2 1E-11 3.5E-16 108.9 6.7 114 101-219 33-155 (313)
191 1jg1_A PIMT;, protein-L-isoasp 99.2 2.5E-11 8.7E-16 102.1 8.7 103 101-222 90-192 (235)
192 1ej0_A FTSJ; methyltransferase 99.2 2.1E-11 7.2E-16 96.5 7.4 122 101-246 21-157 (180)
193 1i1n_A Protein-L-isoaspartate 99.2 4.6E-11 1.6E-15 99.6 9.6 107 101-221 76-184 (226)
194 3uwp_A Histone-lysine N-methyl 99.2 6.1E-11 2.1E-15 107.9 10.8 108 101-218 172-287 (438)
195 3bxo_A N,N-dimethyltransferase 99.2 5.8E-11 2E-15 99.2 9.9 101 101-219 39-141 (239)
196 2aot_A HMT, histamine N-methyl 99.2 6.8E-11 2.3E-15 102.7 10.6 110 102-219 52-172 (292)
197 3mq2_A 16S rRNA methyltransfer 99.2 3.9E-11 1.3E-15 99.4 8.5 110 101-219 26-140 (218)
198 3fzg_A 16S rRNA methylase; met 99.2 1.8E-11 6.2E-16 100.4 6.0 104 101-218 48-151 (200)
199 2yxl_A PH0851 protein, 450AA l 99.2 1.3E-10 4.3E-15 107.5 12.3 116 101-221 258-391 (450)
200 1u2z_A Histone-lysine N-methyl 99.2 6.3E-11 2.1E-15 108.9 10.1 108 101-218 241-358 (433)
201 1sqg_A SUN protein, FMU protei 99.2 1.7E-10 5.7E-15 106.0 12.8 115 101-221 245-376 (429)
202 2qe6_A Uncharacterized protein 99.2 1.3E-10 4.5E-15 100.6 11.1 109 102-221 77-198 (274)
203 3ege_A Putative methyltransfer 99.2 2.7E-11 9.1E-16 103.6 6.3 98 101-219 33-130 (261)
204 3tm4_A TRNA (guanine N2-)-meth 99.2 1.2E-10 4E-15 105.2 10.6 105 100-209 215-321 (373)
205 3cc8_A Putative methyltransfer 99.2 6.5E-11 2.2E-15 98.0 8.1 99 101-219 31-130 (230)
206 2plw_A Ribosomal RNA methyltra 99.2 4.7E-11 1.6E-15 97.5 7.0 124 101-246 21-175 (201)
207 3dp7_A SAM-dependent methyltra 99.2 5.5E-11 1.9E-15 106.7 8.0 110 101-219 178-287 (363)
208 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.4E-10 8.2E-15 102.9 12.0 102 102-222 213-329 (369)
209 2a14_A Indolethylamine N-methy 99.1 4.7E-12 1.6E-16 108.7 0.5 114 102-219 55-197 (263)
210 3gwz_A MMCR; methyltransferase 99.1 3E-10 1E-14 102.1 12.3 107 101-219 201-307 (369)
211 3i53_A O-methyltransferase; CO 99.1 1.6E-10 5.3E-15 102.2 10.1 106 102-219 169-274 (332)
212 3bkx_A SAM-dependent methyltra 99.1 1.3E-10 4.5E-15 99.4 9.4 109 101-219 42-159 (275)
213 2jjq_A Uncharacterized RNA met 99.1 1.7E-10 5.8E-15 106.0 10.6 100 101-220 289-388 (425)
214 3b3j_A Histone-arginine methyl 99.1 3.8E-11 1.3E-15 111.9 6.2 105 102-219 158-263 (480)
215 3iv6_A Putative Zn-dependent a 99.1 1.9E-10 6.6E-15 99.0 10.1 105 101-220 44-149 (261)
216 2nyu_A Putative ribosomal RNA 99.1 9.3E-11 3.2E-15 95.3 7.7 121 101-246 21-166 (196)
217 1qzz_A RDMB, aclacinomycin-10- 99.1 1.6E-10 5.4E-15 103.6 9.9 107 101-219 181-287 (374)
218 2i62_A Nicotinamide N-methyltr 99.1 1.1E-11 3.8E-16 105.2 2.1 114 102-219 56-198 (265)
219 2avn_A Ubiquinone/menaquinone 99.1 1.3E-10 4.3E-15 99.2 8.6 99 101-219 53-152 (260)
220 3mcz_A O-methyltransferase; ad 99.1 1.2E-10 4.2E-15 103.6 8.8 108 103-219 180-287 (352)
221 1p91_A Ribosomal RNA large sub 99.1 1.8E-10 6E-15 98.5 8.6 96 101-220 84-179 (269)
222 3bzb_A Uncharacterized protein 99.1 2.3E-10 7.9E-15 99.2 9.2 110 101-219 78-205 (281)
223 1tw3_A COMT, carminomycin 4-O- 99.1 2.7E-10 9.3E-15 101.6 9.6 107 101-219 182-288 (360)
224 1x19_A CRTF-related protein; m 99.1 4.8E-10 1.6E-14 100.2 10.9 106 101-218 189-294 (359)
225 2r3s_A Uncharacterized protein 99.1 1.8E-10 6E-15 101.6 7.7 107 101-219 164-271 (335)
226 1uwv_A 23S rRNA (uracil-5-)-me 99.1 8.3E-10 2.8E-14 101.5 12.2 102 101-219 285-389 (433)
227 3hp7_A Hemolysin, putative; st 99.1 3.6E-10 1.2E-14 98.7 9.1 98 101-218 84-184 (291)
228 3htx_A HEN1; HEN1, small RNA m 99.1 5.3E-10 1.8E-14 109.0 11.0 107 102-218 721-833 (950)
229 2wa2_A Non-structural protein 99.1 6.1E-11 2.1E-15 102.9 3.9 131 101-246 81-216 (276)
230 2ip2_A Probable phenazine-spec 99.1 1.6E-10 5.5E-15 102.0 6.6 103 104-219 169-272 (334)
231 3sso_A Methyltransferase; macr 99.1 1.9E-10 6.4E-15 104.3 6.9 97 101-218 215-323 (419)
232 1vlm_A SAM-dependent methyltra 99.0 3.4E-10 1.2E-14 94.0 7.7 92 103-219 48-139 (219)
233 2g72_A Phenylethanolamine N-me 99.0 5.4E-11 1.8E-15 103.1 2.8 113 102-218 71-214 (289)
234 2f8l_A Hypothetical protein LM 99.0 2.8E-10 9.7E-15 101.3 7.5 110 102-219 130-256 (344)
235 3cvo_A Methyltransferase-like 99.0 5.3E-10 1.8E-14 92.6 8.2 99 102-217 30-152 (202)
236 2ih2_A Modification methylase 99.0 1.2E-10 4.1E-15 105.9 4.7 103 101-219 38-164 (421)
237 2oxt_A Nucleoside-2'-O-methylt 99.0 7.9E-11 2.7E-15 101.6 3.1 131 101-246 73-208 (265)
238 2p41_A Type II methyltransfera 99.0 1.3E-10 4.4E-15 102.3 4.4 128 101-246 81-214 (305)
239 2b9e_A NOL1/NOP2/SUN domain fa 99.0 7E-09 2.4E-13 91.3 15.4 115 101-221 101-236 (309)
240 3giw_A Protein of unknown func 99.0 2.6E-09 9E-14 92.4 11.1 128 102-239 78-218 (277)
241 4e2x_A TCAB9; kijanose, tetron 99.0 3.2E-10 1.1E-14 103.2 4.9 103 101-219 106-208 (416)
242 3lst_A CALO1 methyltransferase 99.0 1.7E-09 5.7E-14 96.4 9.4 104 101-219 183-286 (348)
243 2r6z_A UPF0341 protein in RSP 99.0 5.8E-10 2E-14 95.8 6.0 80 102-186 83-172 (258)
244 3ldg_A Putative uncharacterize 99.0 2.2E-09 7.5E-14 97.3 10.2 112 101-220 193-344 (384)
245 3k0b_A Predicted N6-adenine-sp 98.9 5.4E-09 1.8E-13 95.0 12.2 112 101-220 200-351 (393)
246 3ll7_A Putative methyltransfer 98.9 1E-09 3.5E-14 100.1 7.4 80 102-185 93-173 (410)
247 4azs_A Methyltransferase WBDD; 98.9 2.1E-09 7.1E-14 102.1 9.7 77 101-183 65-142 (569)
248 3opn_A Putative hemolysin; str 98.9 1E-09 3.4E-14 92.8 6.2 98 101-218 36-136 (232)
249 1zq9_A Probable dimethyladenos 98.9 2.3E-09 7.9E-14 93.2 8.3 77 101-185 27-103 (285)
250 3ldu_A Putative methylase; str 98.9 1.4E-09 4.9E-14 98.5 7.0 111 102-220 195-345 (385)
251 1af7_A Chemotaxis receptor met 98.9 2.5E-09 8.4E-14 92.7 7.7 112 102-219 105-252 (274)
252 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.2E-09 7.4E-14 96.5 7.2 98 101-218 208-305 (372)
253 4a6d_A Hydroxyindole O-methylt 98.9 4.4E-09 1.5E-13 94.1 8.7 104 102-219 179-283 (353)
254 2xyq_A Putative 2'-O-methyl tr 98.9 4.5E-09 1.6E-13 91.7 8.5 119 101-247 62-194 (290)
255 1fp2_A Isoflavone O-methyltran 98.9 3.8E-09 1.3E-13 94.2 8.1 98 102-219 188-288 (352)
256 1m6y_A S-adenosyl-methyltransf 98.9 9.3E-09 3.2E-13 90.2 10.4 79 101-184 25-107 (301)
257 3reo_A (ISO)eugenol O-methyltr 98.9 2.7E-09 9.2E-14 95.9 6.8 98 102-219 203-300 (368)
258 3tqs_A Ribosomal RNA small sub 98.9 6.1E-09 2.1E-13 89.3 8.6 75 101-184 28-105 (255)
259 3gru_A Dimethyladenosine trans 98.9 4.6E-09 1.6E-13 91.9 8.0 76 101-185 49-124 (295)
260 3fut_A Dimethyladenosine trans 98.8 7.3E-09 2.5E-13 89.6 8.8 75 102-186 47-121 (271)
261 3lcv_B Sisomicin-gentamicin re 98.8 1.7E-09 5.7E-14 92.7 4.7 104 101-217 131-234 (281)
262 3p9c_A Caffeic acid O-methyltr 98.8 4.1E-09 1.4E-13 94.6 7.0 98 102-219 201-298 (364)
263 2okc_A Type I restriction enzy 98.8 4E-09 1.4E-13 97.2 6.8 113 102-219 171-307 (445)
264 2oyr_A UPF0341 protein YHIQ; a 98.8 6.1E-09 2.1E-13 89.4 7.1 82 104-187 90-176 (258)
265 2zfu_A Nucleomethylin, cerebra 98.8 3.8E-09 1.3E-13 87.0 5.5 86 101-219 66-151 (215)
266 1qam_A ERMC' methyltransferase 98.8 2.1E-08 7.1E-13 85.2 10.2 76 101-185 29-104 (244)
267 2oo3_A Protein involved in cat 98.8 1.7E-08 5.9E-13 87.2 9.2 122 102-242 91-217 (283)
268 3frh_A 16S rRNA methylase; met 98.8 7.2E-09 2.5E-13 87.8 5.6 101 101-217 104-204 (253)
269 2h1r_A Dimethyladenosine trans 98.8 6.9E-09 2.3E-13 90.8 5.6 76 101-185 41-116 (299)
270 3khk_A Type I restriction-modi 98.7 8.3E-09 2.8E-13 97.5 5.9 115 101-219 243-395 (544)
271 3ftd_A Dimethyladenosine trans 98.7 9.9E-08 3.4E-12 81.4 11.0 75 101-185 30-105 (249)
272 3lkd_A Type I restriction-modi 98.7 5.8E-08 2E-12 91.6 10.3 115 102-219 221-358 (542)
273 1zg3_A Isoflavanone 4'-O-methy 98.7 1.4E-08 4.8E-13 90.6 5.6 97 102-218 193-292 (358)
274 3vyw_A MNMC2; tRNA wobble urid 98.7 1.6E-07 5.5E-12 82.2 11.9 112 103-219 97-226 (308)
275 2ar0_A M.ecoki, type I restric 98.7 2.5E-08 8.7E-13 94.1 7.2 115 102-219 169-312 (541)
276 3v97_A Ribosomal RNA large sub 98.7 3.6E-08 1.2E-12 95.8 7.9 113 101-219 189-347 (703)
277 4fzv_A Putative methyltransfer 98.6 6.5E-07 2.2E-11 80.3 15.2 138 101-239 147-304 (359)
278 2ld4_A Anamorsin; methyltransf 98.6 2.4E-08 8.1E-13 79.8 4.8 88 101-218 11-100 (176)
279 3s1s_A Restriction endonucleas 98.6 4.7E-08 1.6E-12 95.1 7.5 137 102-241 321-487 (878)
280 4gqb_A Protein arginine N-meth 98.6 7.6E-08 2.6E-12 92.1 7.3 102 104-216 359-464 (637)
281 3ua3_A Protein arginine N-meth 98.6 1.8E-07 6.1E-12 89.9 9.5 105 103-216 410-531 (745)
282 3evf_A RNA-directed RNA polyme 98.6 3.7E-08 1.3E-12 84.7 4.2 135 101-248 73-209 (277)
283 3uzu_A Ribosomal RNA small sub 98.5 1.1E-07 3.7E-12 82.5 6.9 76 101-184 41-123 (279)
284 2wk1_A NOVP; transferase, O-me 98.5 1.8E-07 6.1E-12 81.2 8.2 108 101-219 105-244 (282)
285 1qyr_A KSGA, high level kasuga 98.5 7.7E-08 2.6E-12 82.2 5.6 75 101-185 20-100 (252)
286 1yub_A Ermam, rRNA methyltrans 98.5 9.2E-09 3.2E-13 87.2 -2.1 106 101-217 28-143 (245)
287 3gcz_A Polyprotein; flavivirus 98.4 1.1E-07 3.6E-12 82.0 2.6 133 101-248 89-226 (282)
288 3eld_A Methyltransferase; flav 98.3 1.8E-06 6.2E-11 74.8 7.5 134 101-248 80-216 (300)
289 1wg8_A Predicted S-adenosylmet 98.2 7.3E-06 2.5E-10 70.8 10.0 73 102-184 22-98 (285)
290 3ps9_A TRNA 5-methylaminomethy 98.1 6.2E-06 2.1E-10 79.5 9.4 113 103-219 67-219 (676)
291 3pvc_A TRNA 5-methylaminomethy 98.1 4.2E-06 1.4E-10 80.9 7.4 114 102-219 58-211 (689)
292 3r24_A NSP16, 2'-O-methyl tran 98.1 1.4E-05 4.9E-10 69.1 9.4 121 100-248 107-239 (344)
293 2px2_A Genome polyprotein [con 98.1 1.5E-05 5.3E-10 67.7 9.3 130 100-246 71-206 (269)
294 3p8z_A Mtase, non-structural p 98.1 2.8E-05 9.7E-10 65.2 10.6 132 101-247 77-210 (267)
295 2k4m_A TR8_protein, UPF0146 pr 97.8 5.9E-06 2E-10 64.5 2.0 64 101-184 34-99 (153)
296 3lkz_A Non-structural protein 97.8 2.9E-05 1E-09 67.1 6.5 134 101-248 93-229 (321)
297 3ufb_A Type I restriction-modi 97.7 4.9E-05 1.7E-09 71.4 7.1 80 102-185 217-312 (530)
298 2efj_A 3,7-dimethylxanthine me 97.7 0.00027 9.3E-09 63.7 10.8 111 103-220 53-226 (384)
299 1i4w_A Mitochondrial replicati 97.6 5.7E-05 2E-09 67.4 5.9 59 103-168 59-117 (353)
300 4auk_A Ribosomal RNA large sub 97.6 0.00025 8.4E-09 63.5 9.4 70 101-184 210-279 (375)
301 1g55_A DNA cytosine methyltran 97.5 0.00023 7.8E-09 63.2 8.2 124 103-241 2-139 (343)
302 3tka_A Ribosomal RNA small sub 97.4 0.00048 1.6E-08 60.8 8.5 75 102-184 57-137 (347)
303 2zig_A TTHA0409, putative modi 97.3 0.00063 2.1E-08 59.0 8.1 46 101-148 234-279 (297)
304 3b5i_A S-adenosyl-L-methionine 97.3 0.00033 1.1E-08 62.9 6.1 118 101-219 51-225 (374)
305 2c7p_A Modification methylase 97.2 0.0026 9E-08 56.0 10.6 122 103-241 11-143 (327)
306 1m6e_X S-adenosyl-L-methionnin 97.2 0.00043 1.5E-08 61.9 5.5 115 101-219 50-209 (359)
307 3g7u_A Cytosine-specific methy 97.1 0.0011 3.7E-08 59.6 7.2 122 104-241 3-141 (376)
308 3s2e_A Zinc-containing alcohol 96.8 0.0022 7.4E-08 56.3 6.5 98 101-219 165-263 (340)
309 1pl8_A Human sorbitol dehydrog 96.8 0.012 4.2E-07 51.8 11.4 96 101-219 170-273 (356)
310 3m6i_A L-arabinitol 4-dehydrog 96.7 0.011 3.6E-07 52.3 10.8 98 101-219 178-283 (363)
311 1f8f_A Benzyl alcohol dehydrog 96.7 0.003 1E-07 56.1 7.2 99 101-219 189-289 (371)
312 3tos_A CALS11; methyltransfera 96.7 0.014 4.9E-07 49.6 10.7 108 101-219 68-217 (257)
313 3me5_A Cytosine-specific methy 96.7 0.019 6.4E-07 53.2 12.1 127 103-241 88-250 (482)
314 1g60_A Adenine-specific methyl 96.6 0.0044 1.5E-07 52.5 6.9 46 101-148 211-256 (260)
315 3fpc_A NADP-dependent alcohol 96.5 0.0038 1.3E-07 55.0 6.3 98 101-218 165-265 (352)
316 4ej6_A Putative zinc-binding d 96.5 0.0052 1.8E-07 54.6 7.2 99 101-219 181-284 (370)
317 4h0n_A DNMT2; SAH binding, tra 96.4 0.021 7.2E-07 50.3 10.6 123 104-241 4-139 (333)
318 1g60_A Adenine-specific methyl 96.3 0.0038 1.3E-07 52.9 4.8 62 157-219 4-74 (260)
319 3uko_A Alcohol dehydrogenase c 96.3 0.02 6.8E-07 50.9 9.7 99 101-219 192-295 (378)
320 1uuf_A YAHK, zinc-type alcohol 96.3 0.028 9.5E-07 49.9 10.5 94 101-218 193-287 (369)
321 3jv7_A ADH-A; dehydrogenase, n 96.3 0.01 3.4E-07 52.1 7.5 98 101-219 170-270 (345)
322 3ubt_Y Modification methylase 96.2 0.016 5.3E-07 50.5 8.6 121 105-241 2-133 (331)
323 1boo_A Protein (N-4 cytosine-s 96.2 0.0052 1.8E-07 53.9 5.2 67 154-221 11-86 (323)
324 1cdo_A Alcohol dehydrogenase; 96.2 0.032 1.1E-06 49.4 10.4 96 101-219 191-294 (374)
325 2dph_A Formaldehyde dismutase; 96.1 0.0098 3.3E-07 53.3 7.0 110 101-219 184-299 (398)
326 1p0f_A NADP-dependent alcohol 96.1 0.03 1E-06 49.6 10.0 96 101-219 190-293 (373)
327 1kol_A Formaldehyde dehydrogen 96.1 0.043 1.5E-06 49.0 11.0 109 101-219 184-300 (398)
328 2zig_A TTHA0409, putative modi 96.1 0.0076 2.6E-07 52.0 5.8 66 154-220 18-98 (297)
329 1e3i_A Alcohol dehydrogenase, 96.1 0.034 1.2E-06 49.2 10.2 95 101-218 194-296 (376)
330 1e3j_A NADP(H)-dependent ketos 96.1 0.033 1.1E-06 48.9 9.9 98 101-219 167-271 (352)
331 2jhf_A Alcohol dehydrogenase E 96.0 0.047 1.6E-06 48.3 10.6 96 101-219 190-293 (374)
332 3fwz_A Inner membrane protein 95.9 0.04 1.4E-06 41.7 8.7 94 103-219 7-105 (140)
333 2fzw_A Alcohol dehydrogenase c 95.9 0.043 1.5E-06 48.5 10.1 96 101-219 189-292 (373)
334 4eez_A Alcohol dehydrogenase 1 95.9 0.038 1.3E-06 48.2 9.6 99 101-219 162-263 (348)
335 3uog_A Alcohol dehydrogenase; 95.9 0.049 1.7E-06 48.0 10.2 94 101-219 188-287 (363)
336 3qv2_A 5-cytosine DNA methyltr 95.8 0.021 7E-07 50.2 7.5 125 102-241 9-150 (327)
337 3two_A Mannitol dehydrogenase; 95.8 0.023 8E-07 49.8 7.7 90 101-219 175-265 (348)
338 1vj0_A Alcohol dehydrogenase, 95.7 0.06 2E-06 47.8 10.1 96 101-219 194-298 (380)
339 2b5w_A Glucose dehydrogenase; 95.7 0.014 4.8E-07 51.4 5.9 94 104-219 174-273 (357)
340 4a2c_A Galactitol-1-phosphate 95.6 0.065 2.2E-06 46.6 9.8 99 101-219 159-260 (346)
341 1eg2_A Modification methylase 95.6 0.012 4E-07 51.6 4.9 65 156-221 37-108 (319)
342 2h6e_A ADH-4, D-arabinose 1-de 95.6 0.04 1.4E-06 48.1 8.3 94 102-219 170-269 (344)
343 1pqw_A Polyketide synthase; ro 95.6 0.019 6.6E-07 45.9 5.8 97 101-219 37-137 (198)
344 3ip1_A Alcohol dehydrogenase, 95.6 0.023 7.8E-07 51.0 6.8 101 101-219 212-318 (404)
345 4b7c_A Probable oxidoreductase 95.5 0.027 9.3E-07 49.0 6.9 97 101-218 148-247 (336)
346 3ggo_A Prephenate dehydrogenas 95.4 0.18 6.1E-06 43.8 11.9 91 103-217 33-126 (314)
347 1piw_A Hypothetical zinc-type 95.4 0.053 1.8E-06 47.7 8.4 94 101-218 178-275 (360)
348 1rjw_A ADH-HT, alcohol dehydro 95.3 0.024 8.3E-07 49.5 6.0 98 101-219 163-261 (339)
349 2d8a_A PH0655, probable L-thre 95.3 0.02 7E-07 50.1 5.4 98 102-219 167-267 (348)
350 2qrv_A DNA (cytosine-5)-methyl 95.3 0.026 8.9E-07 48.9 5.9 74 102-185 15-93 (295)
351 2dq4_A L-threonine 3-dehydroge 95.1 0.014 4.8E-07 51.1 3.8 96 102-218 164-261 (343)
352 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.077 2.6E-06 46.6 8.6 95 102-219 180-275 (357)
353 4dvj_A Putative zinc-dependent 95.0 0.065 2.2E-06 47.3 7.8 96 102-218 171-269 (363)
354 3goh_A Alcohol dehydrogenase, 94.8 0.035 1.2E-06 47.9 5.5 88 101-219 141-229 (315)
355 1yqd_A Sinapyl alcohol dehydro 94.8 0.11 3.9E-06 45.7 8.9 94 102-218 187-281 (366)
356 1v3u_A Leukotriene B4 12- hydr 94.7 0.074 2.5E-06 46.1 7.3 97 101-219 144-244 (333)
357 2cdc_A Glucose dehydrogenase g 94.7 0.062 2.1E-06 47.4 6.9 93 103-219 181-278 (366)
358 2hcy_A Alcohol dehydrogenase 1 94.6 0.17 5.9E-06 44.1 9.5 98 101-219 168-269 (347)
359 3p2y_A Alanine dehydrogenase/p 94.5 0.15 5.2E-06 45.6 9.0 42 102-144 183-225 (381)
360 1boo_A Protein (N-4 cytosine-s 94.5 0.038 1.3E-06 48.2 5.1 64 100-170 250-313 (323)
361 1iz0_A Quinone oxidoreductase; 94.5 0.14 4.9E-06 43.7 8.6 91 101-218 124-217 (302)
362 3gms_A Putative NADPH:quinone 94.5 0.043 1.5E-06 47.9 5.2 97 101-219 143-243 (340)
363 2vhw_A Alanine dehydrogenase; 94.4 0.31 1.1E-05 43.3 10.9 96 102-217 167-266 (377)
364 3iht_A S-adenosyl-L-methionine 94.3 0.18 6E-06 39.5 7.7 103 101-217 39-145 (174)
365 2j3h_A NADP-dependent oxidored 94.3 0.082 2.8E-06 46.0 6.7 95 101-218 154-254 (345)
366 2c0c_A Zinc binding alcohol de 94.3 0.1 3.4E-06 46.0 7.2 97 101-219 162-261 (362)
367 3fbg_A Putative arginate lyase 94.2 0.12 4E-06 45.2 7.6 96 102-219 150-248 (346)
368 4eye_A Probable oxidoreductase 94.2 0.1 3.6E-06 45.5 7.2 95 101-218 158-256 (342)
369 1jvb_A NAD(H)-dependent alcoho 94.2 0.066 2.2E-06 46.8 5.9 98 101-219 169-271 (347)
370 2py6_A Methyltransferase FKBM; 94.1 0.091 3.1E-06 47.4 6.7 48 101-148 225-274 (409)
371 1pjc_A Protein (L-alanine dehy 94.1 0.37 1.3E-05 42.6 10.6 97 102-218 166-266 (361)
372 2g1u_A Hypothetical protein TM 94.1 0.17 5.7E-06 38.8 7.4 99 101-221 17-120 (155)
373 2zb4_A Prostaglandin reductase 94.1 0.095 3.2E-06 45.9 6.6 98 101-218 157-259 (357)
374 3llv_A Exopolyphosphatase-rela 94.1 0.36 1.2E-05 36.0 9.1 69 103-184 6-79 (141)
375 4dio_A NAD(P) transhydrogenase 94.0 0.17 5.8E-06 45.7 8.3 43 102-145 189-232 (405)
376 3jyn_A Quinone oxidoreductase; 94.0 0.062 2.1E-06 46.5 5.3 97 101-219 139-239 (325)
377 3qwb_A Probable quinone oxidor 94.0 0.058 2E-06 46.9 5.1 97 101-219 147-247 (334)
378 3l9w_A Glutathione-regulated p 93.8 0.2 6.9E-06 45.3 8.4 94 103-219 4-102 (413)
379 1wly_A CAAR, 2-haloacrylate re 93.7 0.16 5.5E-06 44.0 7.4 97 101-219 144-244 (333)
380 2eez_A Alanine dehydrogenase; 93.5 0.49 1.7E-05 41.8 10.4 96 102-217 165-264 (369)
381 3c85_A Putative glutathione-re 93.4 0.59 2E-05 36.5 9.6 95 103-219 39-139 (183)
382 1qor_A Quinone oxidoreductase; 93.3 0.098 3.3E-06 45.2 5.3 97 101-219 139-239 (327)
383 3gaz_A Alcohol dehydrogenase s 93.3 0.18 6E-06 44.1 7.0 94 101-219 149-246 (343)
384 2eih_A Alcohol dehydrogenase; 93.3 0.19 6.4E-06 43.8 7.0 96 102-219 166-265 (343)
385 3swr_A DNA (cytosine-5)-methyl 93.2 0.96 3.3E-05 45.4 12.7 126 103-241 540-692 (1002)
386 4dup_A Quinone oxidoreductase; 92.9 0.11 3.8E-06 45.5 5.1 97 101-219 166-265 (353)
387 1zcj_A Peroxisomal bifunctiona 92.5 0.78 2.7E-05 41.9 10.3 103 103-221 37-152 (463)
388 3gqv_A Enoyl reductase; medium 92.4 0.35 1.2E-05 42.6 7.6 96 101-218 163-262 (371)
389 1bg6_A N-(1-D-carboxylethyl)-L 92.4 0.92 3.1E-05 39.2 10.3 98 104-217 5-107 (359)
390 1id1_A Putative potassium chan 92.2 0.78 2.7E-05 34.7 8.5 98 103-220 3-106 (153)
391 2vn8_A Reticulon-4-interacting 92.1 0.37 1.3E-05 42.4 7.5 97 101-219 182-280 (375)
392 1yb5_A Quinone oxidoreductase; 92.1 0.17 5.7E-06 44.4 5.1 96 101-218 169-268 (351)
393 4a0s_A Octenoyl-COA reductase/ 92.1 0.54 1.9E-05 42.4 8.7 44 101-145 219-264 (447)
394 2g5c_A Prephenate dehydrogenas 92.1 1.3 4.5E-05 37.0 10.7 90 104-217 2-94 (281)
395 2y0c_A BCEC, UDP-glucose dehyd 92.1 1.3 4.4E-05 40.7 11.3 111 102-220 7-129 (478)
396 3ado_A Lambda-crystallin; L-gu 92.0 0.69 2.4E-05 40.3 8.9 106 101-221 4-125 (319)
397 2j8z_A Quinone oxidoreductase; 91.9 0.18 6.2E-06 44.2 5.1 97 101-219 161-261 (354)
398 2dpo_A L-gulonate 3-dehydrogen 91.9 0.38 1.3E-05 41.9 7.1 103 103-220 6-124 (319)
399 1jw9_B Molybdopterin biosynthe 91.7 0.28 9.4E-06 41.1 5.8 34 102-136 30-65 (249)
400 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.32 1.1E-05 40.2 6.0 79 90-184 18-100 (223)
401 4ft4_B DNA (cytosine-5)-methyl 91.5 1.2 4.2E-05 43.2 11.1 56 104-168 213-273 (784)
402 1eg2_A Modification methylase 91.5 0.31 1.1E-05 42.4 6.1 46 100-147 240-288 (319)
403 3ijr_A Oxidoreductase, short c 91.4 3.8 0.00013 34.5 12.9 76 102-184 46-134 (291)
404 1lss_A TRK system potassium up 91.3 1.7 5.9E-05 31.6 9.5 70 103-184 4-78 (140)
405 4a7p_A UDP-glucose dehydrogena 91.3 1.9 6.4E-05 39.3 11.3 110 103-220 8-130 (446)
406 3o26_A Salutaridine reductase; 91.1 0.52 1.8E-05 39.7 7.0 77 102-184 11-100 (311)
407 1xa0_A Putative NADPH dependen 91.0 0.48 1.7E-05 40.7 6.9 91 105-219 152-246 (328)
408 1l7d_A Nicotinamide nucleotide 91.0 1 3.5E-05 40.0 9.2 42 102-144 171-213 (384)
409 3nx4_A Putative oxidoreductase 90.9 0.28 9.6E-06 42.1 5.3 90 105-219 149-241 (324)
410 3ic5_A Putative saccharopine d 90.9 1.3 4.3E-05 31.3 8.1 69 103-183 5-77 (118)
411 3h7a_A Short chain dehydrogena 90.9 1.1 3.6E-05 37.1 8.7 75 102-184 6-92 (252)
412 2o3j_A UDP-glucose 6-dehydroge 90.9 2.7 9.1E-05 38.5 12.1 110 104-219 10-135 (481)
413 3i1j_A Oxidoreductase, short c 90.8 2.2 7.5E-05 34.6 10.5 77 102-184 13-103 (247)
414 4eso_A Putative oxidoreductase 90.7 2.4 8.1E-05 35.0 10.7 73 102-184 7-91 (255)
415 3av4_A DNA (cytosine-5)-methyl 90.7 3.3 0.00011 42.9 13.5 126 103-241 851-1003(1330)
416 2vz8_A Fatty acid synthase; tr 90.7 0.041 1.4E-06 60.3 -0.4 99 105-217 1243-1346(2512)
417 1zud_1 Adenylyltransferase THI 90.6 0.71 2.4E-05 38.6 7.3 34 102-136 27-62 (251)
418 3l4b_C TRKA K+ channel protien 90.5 1.6 5.4E-05 35.1 9.2 94 105-220 2-100 (218)
419 4a27_A Synaptic vesicle membra 90.5 0.46 1.6E-05 41.4 6.3 95 101-219 141-238 (349)
420 3f1l_A Uncharacterized oxidore 90.4 3.2 0.00011 34.0 11.2 77 102-184 11-101 (252)
421 3gg2_A Sugar dehydrogenase, UD 90.4 2.9 9.8E-05 38.0 11.8 108 104-219 3-122 (450)
422 1x13_A NAD(P) transhydrogenase 90.4 0.86 3E-05 40.9 8.1 43 102-145 171-214 (401)
423 3qsg_A NAD-binding phosphogluc 90.3 7 0.00024 33.3 13.6 108 102-241 23-134 (312)
424 2aef_A Calcium-gated potassium 90.3 1.2 4.2E-05 36.2 8.4 95 102-221 8-107 (234)
425 3tqh_A Quinone oxidoreductase; 90.1 0.88 3E-05 39.0 7.7 91 101-218 151-244 (321)
426 3h8v_A Ubiquitin-like modifier 90.0 0.38 1.3E-05 41.4 5.2 34 102-136 35-70 (292)
427 1f0y_A HCDH, L-3-hydroxyacyl-C 89.7 2.2 7.7E-05 36.1 9.9 102 103-219 15-136 (302)
428 3oj0_A Glutr, glutamyl-tRNA re 89.4 2.7 9.3E-05 31.3 9.2 66 103-185 21-90 (144)
429 3ioy_A Short-chain dehydrogena 89.4 1.8 6.2E-05 37.1 9.2 78 102-184 7-96 (319)
430 3lyl_A 3-oxoacyl-(acyl-carrier 89.4 2.3 7.8E-05 34.6 9.5 76 102-184 4-91 (247)
431 3pqe_A L-LDH, L-lactate dehydr 89.3 5.3 0.00018 34.7 12.1 107 102-220 4-123 (326)
432 4g65_A TRK system potassium up 89.3 3.4 0.00012 37.7 11.3 73 101-184 233-309 (461)
433 1zej_A HBD-9, 3-hydroxyacyl-CO 89.1 1.2 4.2E-05 38.2 7.8 96 102-220 11-108 (293)
434 4e12_A Diketoreductase; oxidor 89.1 1.6 5.6E-05 36.8 8.6 103 103-220 4-122 (283)
435 3o38_A Short chain dehydrogena 89.1 1.6 5.5E-05 36.0 8.4 77 102-184 21-110 (266)
436 3b1f_A Putative prephenate deh 89.1 1.3 4.4E-05 37.3 7.9 90 103-216 6-98 (290)
437 3mog_A Probable 3-hydroxybutyr 89.0 0.87 3E-05 41.9 7.1 102 103-220 5-121 (483)
438 2q3e_A UDP-glucose 6-dehydroge 88.9 5.1 0.00018 36.4 12.3 108 104-217 6-129 (467)
439 3krt_A Crotonyl COA reductase; 88.9 1.3 4.4E-05 40.2 8.2 104 101-219 227-344 (456)
440 3oig_A Enoyl-[acyl-carrier-pro 88.7 6.3 0.00022 32.3 11.8 77 102-184 6-96 (266)
441 3qiv_A Short-chain dehydrogena 88.6 1.6 5.4E-05 35.7 8.0 76 102-184 8-95 (253)
442 3ktd_A Prephenate dehydrogenas 88.6 0.64 2.2E-05 40.8 5.7 94 101-220 6-101 (341)
443 2gn4_A FLAA1 protein, UDP-GLCN 88.5 2.1 7.2E-05 37.0 9.0 75 102-184 20-100 (344)
444 1y8q_A Ubiquitin-like 1 activa 88.5 0.26 8.7E-06 43.5 3.1 52 84-136 15-70 (346)
445 3vku_A L-LDH, L-lactate dehydr 88.4 6.4 0.00022 34.2 12.0 112 100-220 6-126 (326)
446 3e8x_A Putative NAD-dependent 88.4 1.1 3.8E-05 36.2 6.8 70 102-184 20-93 (236)
447 3guy_A Short-chain dehydrogena 88.4 2.2 7.5E-05 34.4 8.6 71 104-184 2-81 (230)
448 3hwr_A 2-dehydropantoate 2-red 88.2 2.4 8.2E-05 36.4 9.1 99 102-219 18-120 (318)
449 3h2s_A Putative NADH-flavin re 88.1 4.1 0.00014 32.2 10.0 67 105-185 2-72 (224)
450 3ucx_A Short chain dehydrogena 87.9 7.5 0.00026 31.9 11.8 76 102-184 10-97 (264)
451 3rd5_A Mypaa.01249.C; ssgcid, 87.7 4.1 0.00014 34.1 10.2 72 102-184 15-95 (291)
452 3r3s_A Oxidoreductase; structu 87.7 5.6 0.00019 33.4 11.1 76 102-184 48-137 (294)
453 3gaf_A 7-alpha-hydroxysteroid 87.6 2.2 7.6E-05 35.1 8.2 76 102-184 11-98 (256)
454 3k96_A Glycerol-3-phosphate de 87.5 4.1 0.00014 35.7 10.4 97 103-217 29-131 (356)
455 4fn4_A Short chain dehydrogena 87.5 6.7 0.00023 32.7 11.2 76 102-184 6-93 (254)
456 3h9u_A Adenosylhomocysteinase; 87.4 2.7 9.3E-05 38.1 9.2 91 101-222 209-300 (436)
457 3sju_A Keto reductase; short-c 87.4 2.9 9.9E-05 34.9 9.0 76 102-184 23-110 (279)
458 1yb1_A 17-beta-hydroxysteroid 87.3 3.9 0.00013 33.9 9.7 76 102-184 30-117 (272)
459 3cea_A MYO-inositol 2-dehydrog 87.2 5.5 0.00019 34.2 10.9 70 102-184 7-80 (346)
460 3d0o_A L-LDH 1, L-lactate dehy 87.2 5.7 0.00019 34.2 10.9 110 102-220 5-124 (317)
461 3rkr_A Short chain oxidoreduct 87.2 2.1 7.2E-05 35.3 7.9 76 102-184 28-115 (262)
462 3abi_A Putative uncharacterize 87.1 2 6.7E-05 37.7 8.0 69 102-184 15-86 (365)
463 3tjr_A Short chain dehydrogena 87.0 2.8 9.5E-05 35.5 8.8 76 102-184 30-117 (301)
464 3rui_A Ubiquitin-like modifier 87.0 1.8 6.2E-05 38.0 7.6 34 102-136 33-68 (340)
465 3svt_A Short-chain type dehydr 87.0 8.4 0.00029 31.9 11.7 79 102-184 10-100 (281)
466 1tt7_A YHFP; alcohol dehydroge 86.8 0.71 2.4E-05 39.7 4.9 90 105-219 153-247 (330)
467 3nyw_A Putative oxidoreductase 86.7 2.7 9.2E-05 34.5 8.3 79 102-184 6-96 (250)
468 3sx2_A Putative 3-ketoacyl-(ac 86.7 3.2 0.00011 34.4 8.9 76 102-184 12-111 (278)
469 3n58_A Adenosylhomocysteinase; 86.7 5.9 0.0002 36.2 10.9 91 101-222 245-336 (464)
470 2hwk_A Helicase NSP2; rossman 86.7 0.52 1.8E-05 40.4 3.7 68 174-247 205-278 (320)
471 3imf_A Short chain dehydrogena 86.6 2.5 8.7E-05 34.7 8.1 76 102-184 5-92 (257)
472 3f9i_A 3-oxoacyl-[acyl-carrier 86.6 3.2 0.00011 33.7 8.6 73 101-184 12-93 (249)
473 3vrd_B FCCB subunit, flavocyto 86.4 0.61 2.1E-05 41.1 4.3 35 103-137 2-38 (401)
474 2rhc_B Actinorhodin polyketide 86.4 4.3 0.00015 33.7 9.5 76 102-184 21-108 (277)
475 3v8b_A Putative dehydrogenase, 86.3 8.9 0.0003 32.0 11.5 76 102-184 27-114 (283)
476 4dcm_A Ribosomal RNA large sub 86.2 3.6 0.00012 36.3 9.3 119 102-245 38-156 (375)
477 1a5z_A L-lactate dehydrogenase 86.2 5.9 0.0002 34.0 10.5 105 105-220 2-117 (319)
478 3pk0_A Short-chain dehydrogena 86.2 2.2 7.4E-05 35.4 7.4 77 102-184 9-97 (262)
479 3awd_A GOX2181, putative polyo 86.2 3.9 0.00013 33.3 9.0 76 102-184 12-99 (260)
480 3rih_A Short chain dehydrogena 86.1 1.4 4.9E-05 37.4 6.4 77 102-184 40-128 (293)
481 4aj2_A L-lactate dehydrogenase 86.0 9.6 0.00033 33.1 11.8 110 102-220 18-137 (331)
482 4e6p_A Probable sorbitol dehyd 86.0 5.5 0.00019 32.7 9.9 73 102-184 7-91 (259)
483 1zem_A Xylitol dehydrogenase; 86.0 4 0.00014 33.6 9.0 76 102-184 6-93 (262)
484 4e21_A 6-phosphogluconate dehy 85.9 11 0.00039 32.9 12.3 91 102-217 21-113 (358)
485 3zwc_A Peroxisomal bifunctiona 85.8 2.5 8.6E-05 41.0 8.6 102 104-221 317-431 (742)
486 1mv8_A GMD, GDP-mannose 6-dehy 85.7 8.1 0.00028 34.7 11.5 105 105-217 2-121 (436)
487 4iin_A 3-ketoacyl-acyl carrier 85.7 3 0.0001 34.6 8.1 76 102-184 28-116 (271)
488 1yxm_A Pecra, peroxisomal tran 85.6 4.8 0.00016 33.7 9.5 81 102-184 17-109 (303)
489 3n74_A 3-ketoacyl-(acyl-carrie 85.4 4.4 0.00015 33.1 9.0 73 102-184 8-92 (261)
490 3ew7_A LMO0794 protein; Q8Y8U8 85.3 4.3 0.00015 31.9 8.6 67 105-185 2-71 (221)
491 3k6j_A Protein F01G10.3, confi 85.2 3.2 0.00011 37.9 8.6 101 104-220 55-167 (460)
492 3i83_A 2-dehydropantoate 2-red 85.1 3.8 0.00013 35.0 8.7 95 104-218 3-104 (320)
493 2ae2_A Protein (tropinone redu 85.0 3 0.0001 34.3 7.7 76 102-184 8-96 (260)
494 1ae1_A Tropinone reductase-I; 85.0 5.8 0.0002 32.8 9.6 76 102-184 20-108 (273)
495 4ibo_A Gluconate dehydrogenase 85.0 2.4 8E-05 35.4 7.1 77 101-184 24-112 (271)
496 3pxx_A Carveol dehydrogenase; 84.9 4.2 0.00014 33.7 8.7 76 102-184 9-108 (287)
497 3r1i_A Short-chain type dehydr 84.8 2.8 9.7E-05 35.0 7.6 77 101-184 30-118 (276)
498 2jah_A Clavulanic acid dehydro 84.8 5.1 0.00017 32.7 9.0 76 102-184 6-93 (247)
499 1fmc_A 7 alpha-hydroxysteroid 84.8 3.8 0.00013 33.2 8.2 76 102-184 10-97 (255)
500 2v6b_A L-LDH, L-lactate dehydr 84.7 8.4 0.00029 32.8 10.7 106 105-219 2-116 (304)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.6e-49 Score=347.79 Aligned_cols=218 Identities=39% Similarity=0.678 Sum_probs=198.9
Q ss_pred cccceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeE
Q 025534 27 RKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (251)
Q Consensus 27 ~~~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~V 106 (251)
....|+ |+..++.++.|.++++|++++|+||+|.|++++.+||+|+|||.+|++++|++.|||+|+|+|++.+++|++|
T Consensus 9 ~~~~w~-e~~~~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~V 87 (294)
T 3o4f_A 9 EKKQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHV 87 (294)
T ss_dssp -CEEEE-CCSSSSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccccee-eeccCCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeE
Confidence 345798 5667788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchh-cccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025534 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (251)
Q Consensus 107 L~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~ 185 (251)
|+||+|+|+++++++++++..+|++|||||+|+++|+++|+ .+.+.+++||++++.+|+++|++...++||+||+|+++
T Consensus 88 LIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~d 167 (294)
T 3o4f_A 88 LIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD 167 (294)
T ss_dssp EEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCC
T ss_pred EEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCC
Confidence 99999999999999999888899999999999999999997 45556789999999999999998888999999999999
Q ss_pred CCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeecc
Q 025534 186 PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLTL 250 (251)
Q Consensus 186 ~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~ 250 (251)
|. +|+..|++.+||+. ++++|+|||++++|.++| +...+.+..+.++++++||.+.+|..
T Consensus 168 p~--~~~~~L~t~eFy~~-~~~~L~p~Gv~v~q~~sp--~~~~~~~~~~~~~l~~~F~~v~~~~~ 227 (294)
T 3o4f_A 168 PI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQA 227 (294)
T ss_dssp CC--CTTCCSSCCHHHHH-HHHTEEEEEEEEEEEEES--SSCCHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cC--CCchhhcCHHHHHH-HHHHhCCCCEEEEecCCc--ccChHHHHHHHHHHHhhCCceeeeee
Confidence 87 66689999999999 799999999999999888 67788899999999999999988753
No 2
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=2.1e-40 Score=289.38 Aligned_cols=216 Identities=34% Similarity=0.701 Sum_probs=195.2
Q ss_pred cceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeEEE
Q 025534 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (251)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~VL~ 108 (251)
.+|++|..+++.+..+.++++|++.+|+||+|.|++++.+|+.|++||..|+++.+++.|+|++.+++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLd 81 (275)
T 1iy9_A 2 ELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLV 81 (275)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CccEEEecCCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEE
Confidence 47999999999999999999999999999999999999999999999999999999999999999988877888999999
Q ss_pred EecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCC
Q 025534 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIE 188 (251)
Q Consensus 109 iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~ 188 (251)
||||+|.++++++++++..+|++||+|+++++.|+++++.....+.++|++++++|+++++...+++||+|++|++++.
T Consensus 82 iG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~- 160 (275)
T 1iy9_A 82 VGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPV- 160 (275)
T ss_dssp ESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCC-
T ss_pred ECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCC-
Confidence 9999999999999986668999999999999999999864222245789999999999999766789999999999876
Q ss_pred CCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 189 GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 189 ~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
.+...+++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+++.+|.
T Consensus 161 -~~~~~l~~~~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~ 217 (275)
T 1iy9_A 161 -GPAVNLFTKGFYAG-IAKALKEDGIFVAQTDNP--WFTPELITNVQRDVKEIFPITKLYT 217 (275)
T ss_dssp -SCCCCCSTTHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEE
T ss_pred -CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--cccHHHHHHHHHHHHHhCCCeEEEE
Confidence 45568899999999 799999999999998777 5678889999999999999998775
No 3
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=6.1e-41 Score=295.36 Aligned_cols=215 Identities=39% Similarity=0.680 Sum_probs=181.0
Q ss_pred cceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeEEE
Q 025534 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (251)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~VL~ 108 (251)
..|. |+..++.++.+.+.++|++.+|+||+|.|++++.+|++|++||.+|+++++++.|+|++++++++.++++++|||
T Consensus 11 ~~~~-~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLd 89 (294)
T 3adn_A 11 KQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLI 89 (294)
T ss_dssp -CEE-CCSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred hccc-cccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEE
Confidence 4688 467889999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc-cCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCC
Q 025534 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDVIIGDLADPI 187 (251)
Q Consensus 109 iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~ 187 (251)
||||+|.++++++++.+..+|++||+|+++++.|+++++.. .+.+.++|++++++|++++++...++||+|++|+++|.
T Consensus 90 iG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~ 169 (294)
T 3adn_A 90 IGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI 169 (294)
T ss_dssp ESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----
T ss_pred EeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCcc
Confidence 99999999999999876789999999999999999998743 33356789999999999999776789999999999877
Q ss_pred CCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 188 EGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 188 ~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
+|...+++.+||+. ++++|+|||+++++.++| +...+.++.+.++++++|+.+.+|.
T Consensus 170 --~~~~~l~~~~f~~~-~~~~LkpgG~lv~~~~s~--~~~~~~~~~~~~~l~~~F~~v~~~~ 226 (294)
T 3adn_A 170 --GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQ 226 (294)
T ss_dssp --------CCHHHHHH-HHHTEEEEEEEEEEEEEC--SSCCHHHHHHHHHHHHHCSEEEEEE
T ss_pred --CcchhccHHHHHHH-HHHhcCCCCEEEEecCCc--ccchHHHHHHHHHHHHHCCCeEEEE
Confidence 56568999999999 799999999999999877 6667889999999999999998875
No 4
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=1.1e-40 Score=299.89 Aligned_cols=221 Identities=21% Similarity=0.347 Sum_probs=188.0
Q ss_pred cCcCCCCccccceEEee--eccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhH
Q 025534 19 KNVALTGYRKSCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPA 96 (251)
Q Consensus 19 ~~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~ 96 (251)
+.-++|+..+++|+..+ .+++....|.++++||+++|+||+|.|++++.+||+|+|||.+|++++| +.|+|+|+|++
T Consensus 122 ~~~~~~~~~rg~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~ 200 (381)
T 3c6k_A 122 RVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSG 200 (381)
T ss_dssp CEECCCCEEESCSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTT
T ss_pred hhcccCccccCCccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHH
Confidence 44568988899888766 3578999999999999999999999999999999999999999999998 67999999988
Q ss_pred hhcCCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc-ccCCCC---CCCeEEEEcchHHHHhc-
Q 025534 97 LLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFS---DPRLELVINDARAELES- 171 (251)
Q Consensus 97 ~~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~---~~rv~~~~~D~~~~l~~- 171 (251)
++.+ ++++||+||+|+|++++++++++. .+|++|||||+|+++|++||+. ++..++ ++|++++++|+++|+++
T Consensus 201 l~~~-~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 201 KEDY-TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp CCCC-TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred hhcC-CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 7654 579999999999999999999865 7999999999999999999873 333333 45799999999999974
Q ss_pred --CCCceeEEEEcCCCCCC-C---CcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCce
Q 025534 172 --RKESYDVIIGDLADPIE-G---GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (251)
Q Consensus 172 --~~~~fD~Ii~D~~~~~~-~---~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (251)
..++||+||+|++++.. . ++...|++++||+. ++++|+|||++++|.++| +. .+.++.+.++|+++|+.+
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~-~~~~L~p~GVlv~Q~~s~--~~-~~~~~~i~~tl~~vF~~v 354 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL-SMKVLKQDGKYFTQGNCV--NL-TEALSLYEEQLGRLYCPV 354 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH-HHHTEEEEEEEEEEEEET--TC-HHHHHHHHHHHTTSSSCE
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHH-HHHhcCCCCEEEEecCCC--cc-hhHHHHHHHHHHHhCCcc
Confidence 35789999999886431 1 33457899999999 799999999999999887 43 567889999999999987
Q ss_pred e
Q 025534 246 Y 246 (251)
Q Consensus 246 ~ 246 (251)
.
T Consensus 355 ~ 355 (381)
T 3c6k_A 355 E 355 (381)
T ss_dssp E
T ss_pred e
Confidence 4
No 5
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=1.7e-38 Score=278.27 Aligned_cols=216 Identities=33% Similarity=0.613 Sum_probs=193.7
Q ss_pred cceEEee--eccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeE
Q 025534 29 SCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (251)
Q Consensus 29 ~~w~~~~--~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~V 106 (251)
..|+.|. .+++.+..+...++|++.+|+||+|.|++++.+|+.|++||.+|+++++++.|++++.+++++.++++++|
T Consensus 3 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 82 (283)
T 2i7c_A 3 KKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNV 82 (283)
T ss_dssp CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEE
T ss_pred ceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeE
Confidence 4799998 66899999999999999999999999999999999999999999999999999999999998878889999
Q ss_pred EEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCC
Q 025534 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (251)
Q Consensus 107 L~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~ 186 (251)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++..+..+.+++++++++|+++++....++||+|++|++++
T Consensus 83 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~ 162 (283)
T 2i7c_A 83 LVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDP 162 (283)
T ss_dssp EEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCT
T ss_pred EEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCC
Confidence 99999999999999998666899999999999999999987432223468999999999999876678899999999887
Q ss_pred CCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 187 ~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
. .+...+++.+|++. ++++|+|||+++++..+| +...+.++.+.++++++|+.+.+|.
T Consensus 163 ~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~ 220 (283)
T 2i7c_A 163 I--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYAN 220 (283)
T ss_dssp T--TGGGGGSSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEE
T ss_pred C--CcchhhhHHHHHHH-HHHhcCCCcEEEEECCCc--ccCHHHHHHHHHHHHHHCCceEEEE
Confidence 6 55567889999999 799999999999998776 6677889999999999999987664
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=4.4e-38 Score=278.37 Aligned_cols=224 Identities=31% Similarity=0.618 Sum_probs=185.3
Q ss_pred CcCCCCccccceEEeeec--cccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHh
Q 025534 20 NVALTGYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPAL 97 (251)
Q Consensus 20 ~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~ 97 (251)
+...|+.....|+.|..+ ++....+.+.++||+.+|+||+|.|++++.+|+.|++||.+|+++++++.|++++.++++
T Consensus 11 ~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l 90 (304)
T 2o07_A 11 AASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPL 90 (304)
T ss_dssp -------CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHH
T ss_pred CCCCCcccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHH
Confidence 334567778899999865 889999999999999999999999999999999999999999999999999999999888
Q ss_pred hcCCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 98 ~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
+.++++++||+||||+|.++++++++.+..+|++||+|+++++.|+++++.....+.+++++++++|+++++....++||
T Consensus 91 ~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 91 CSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred hhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCce
Confidence 77788999999999999999999998666799999999999999999986421113468999999999999876668899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeee
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNL 248 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (251)
+|++|++++. .|...+++.+|++. ++++|+|||+++++..++ +...+..+.+.++++++|+++..+
T Consensus 171 ~Ii~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~ 236 (304)
T 2o07_A 171 VIITDSSDPM--GPAESLFKESYYQL-MKTALKEDGVLCCQGECQ--WLHLDLIKEMRQFCQSLFPVVAYA 236 (304)
T ss_dssp EEEEECC-------------CHHHHH-HHHHEEEEEEEEEEEECT--TTCHHHHHHHHHHHHHHCSEEEEE
T ss_pred EEEECCCCCC--CcchhhhHHHHHHH-HHhccCCCeEEEEecCCc--ccchHHHHHHHHHHHHhCCCceeE
Confidence 9999998776 44456788899999 799999999999998766 666778889999999999988665
No 7
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=7.4e-38 Score=278.04 Aligned_cols=220 Identities=45% Similarity=0.749 Sum_probs=192.0
Q ss_pred cccceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeE
Q 025534 27 RKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (251)
Q Consensus 27 ~~~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~V 106 (251)
.+.+|++|..+++.+..+.+.++|++.+|+||+|.|++++.+|+.|++||..|++..+++.|++++.+++++.++++++|
T Consensus 2 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 81 (314)
T 1uir_A 2 DYGMYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRV 81 (314)
T ss_dssp CSSCEEEEESSSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CCCceEEEEcCCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc-ccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025534 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (251)
Q Consensus 107 L~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~ 185 (251)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++. +.+.+.+++++++.+|+++++....++||+|++|+++
T Consensus 82 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 82 LIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD 161 (314)
T ss_dssp EEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC
T ss_pred EEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC
Confidence 999999999999999986667999999999999999999863 2211346899999999999987667899999999987
Q ss_pred CC-CCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCC-CChHHHHHHHHHHHhhCCceeeec
Q 025534 186 PI-EGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF-SHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 186 ~~-~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~-~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
+. ..+|...+++.+|++. ++++|+|||+++++.++| + .+.+.++.+.++++++|+++.+|.
T Consensus 162 ~~~~~~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~~l~~~F~~v~~~~ 224 (314)
T 1uir_A 162 PVGEDNPARLLYTVEFYRL-VKAHLNPGGVMGMQTGMI--LLTHHRVHPVVHRTVREAFRYVRSYK 224 (314)
T ss_dssp CBSTTCGGGGGSSHHHHHH-HHHTEEEEEEEEEEEEEE--CC---CHHHHHHHHHHTTCSEEEEEE
T ss_pred cccccCcchhccHHHHHHH-HHHhcCCCcEEEEEccCc--cccCHHHHHHHHHHHHHHCCceEEEE
Confidence 65 1244467889999999 799999999999998765 3 445788999999999999998764
No 8
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=1.2e-37 Score=272.46 Aligned_cols=213 Identities=34% Similarity=0.664 Sum_probs=186.5
Q ss_pred cceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeEEE
Q 025534 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (251)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~VL~ 108 (251)
.+|++|..+++.+..+.+.++|++.+|+||+|.|++++.+|+.|++||..|+++++++.|++++.+++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLd 81 (281)
T 1mjf_A 2 ERAFIEWYPRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLV 81 (281)
T ss_dssp --CEEEEEGGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred CccEEEecCCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999888877788899999
Q ss_pred EecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCC-------CCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-------SDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 109 iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-------~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
||||+|.++++++++ +..+|++||+|+.+++.|++++.. ...+ .+++++++.+|+++++.. +++||+|++
T Consensus 82 iG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~-~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~ 158 (281)
T 1mjf_A 82 IGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKI-DNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIA 158 (281)
T ss_dssp EECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCT-TTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEE
T ss_pred EcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhh-ccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEE
Confidence 999999999999998 667999999999999999999822 1122 368999999999999876 678999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
|++++. ++...+++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+++..|.
T Consensus 159 d~~~~~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~ 221 (281)
T 1mjf_A 159 DSTDPV--GPAKVLFSEEFYRY-VYDALNNPGIYVTQAGSV--YLFTDELISAYKEMKKVFDRVYYYS 221 (281)
T ss_dssp ECCCCC-------TTSHHHHHH-HHHHEEEEEEEEEEEEET--TTSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCceEEEE
Confidence 999876 44467888999999 799999999999998776 5677889999999999999988765
No 9
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=1.4e-37 Score=274.04 Aligned_cols=219 Identities=33% Similarity=0.636 Sum_probs=188.5
Q ss_pred cccceEEeeec-cccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCe
Q 025534 27 RKSCWYEEEIE-ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKT 105 (251)
Q Consensus 27 ~~~~w~~~~~~-~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~ 105 (251)
...+|++|..+ ++.+..+.+.++|++.+|+||+|.|++++.+|+.|++||.+|++.++++.|++++++++++.++++++
T Consensus 14 ~~~~w~~e~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~ 93 (296)
T 1inl_A 14 RQHLWYFEYYTGNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKK 93 (296)
T ss_dssp CSSEEEEEECTTSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCceEEEecCCCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCE
Confidence 66789999998 99999999999999999999999999999999999999999999999999999999988887888899
Q ss_pred EEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025534 106 IFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (251)
Q Consensus 106 VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~ 185 (251)
|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++++|+++++....++||+|++|+++
T Consensus 94 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 173 (296)
T 1inl_A 94 VLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTD 173 (296)
T ss_dssp EEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCC
Confidence 99999999999999999865679999999999999999998531111346899999999999987666789999999987
Q ss_pred CCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 186 PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 186 ~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
++. ++...+++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+++.+|.
T Consensus 174 ~~~-~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~ 233 (296)
T 1inl_A 174 PTA-GQGGHLFTEEFYQA-CYDALKEDGVFSAETEDP--FYDIGWFKLAYRRISKVFPITRVYL 233 (296)
T ss_dssp ---------CCSHHHHHH-HHHHEEEEEEEEEECCCT--TTTHHHHHHHHHHHHHHCSEEEEEE
T ss_pred ccc-CchhhhhHHHHHHH-HHHhcCCCcEEEEEccCc--ccCHHHHHHHHHHHHHHCCceEEEE
Confidence 732 45567889999999 799999999999998877 5677889999999999999998775
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=2e-37 Score=275.23 Aligned_cols=209 Identities=34% Similarity=0.675 Sum_probs=176.4
Q ss_pred eccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeEEEEecCchH
Q 025534 36 IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS 115 (251)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~ 115 (251)
..++....+.+.++|++.+|+||+|.|++++.+|+.|++||.+|++.++++.|++++++++++.++++++||+||||+|.
T Consensus 42 ~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~ 121 (314)
T 2b2c_A 42 AWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGG 121 (314)
T ss_dssp CCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSH
T ss_pred cCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCH
Confidence 56888899999999999999999999999999999999999999999999999999999888777888999999999999
Q ss_pred HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCC
Q 025534 116 TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKL 195 (251)
Q Consensus 116 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l 195 (251)
++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++.+|+++++....++||+|++|++++. .|...+
T Consensus 122 ~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~--~~~~~l 199 (314)
T 2b2c_A 122 ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV--GPAESL 199 (314)
T ss_dssp HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC--Ccchhh
Confidence 999999986668999999999999999999864311134689999999999998766688999999998776 454678
Q ss_pred ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 196 YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 196 ~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
++.+|++. ++++|+|||+++++.+++ +...+.++.+.++++++|+++..|.
T Consensus 200 ~t~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~vF~~v~~~~ 250 (314)
T 2b2c_A 200 FGQSYYEL-LRDALKEDGILSSQGESV--WLHLPLIAHLVAFNRKIFPAVTYAQ 250 (314)
T ss_dssp ----HHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSEEEEEE
T ss_pred hHHHHHHH-HHhhcCCCeEEEEECCCc--ccCHHHHHHHHHHHHHHCCcceEEE
Confidence 88999999 799999999999998777 6677889999999999999987764
No 11
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=1e-36 Score=271.53 Aligned_cols=218 Identities=33% Similarity=0.598 Sum_probs=193.1
Q ss_pred cccceEEeeec--cccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCC
Q 025534 27 RKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPK 104 (251)
Q Consensus 27 ~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~ 104 (251)
....|++|..+ ++.+..+...++|++.+|+||+|.|++++.+|+.|++||.+|++.++++.|+|++++++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 46789999998 8999999999999999999999999999989999999999999999999999999998887778889
Q ss_pred eEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025534 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (251)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~ 184 (251)
+|||||||+|.++++++++.+..+|++||+|+++++.|+++++.....+.+++++++++|+++++...+++||+|++|++
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 198 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc
Confidence 99999999999999999986667999999999999999999864211234689999999999998766678999999998
Q ss_pred CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 185 ~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
++. +|...+++.++++. ++++|+|||+++++..++ +...+.++.+.++++++|+++.+|.
T Consensus 199 ~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~ 258 (321)
T 2pt6_A 199 DPI--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYAN 258 (321)
T ss_dssp CSS--SGGGGGSSHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCCeEEEE
Confidence 776 55567888999999 799999999999998776 5677889999999999999998774
No 12
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=4.7e-37 Score=275.41 Aligned_cols=219 Identities=23% Similarity=0.403 Sum_probs=177.8
Q ss_pred CcCCCCccccceEEeee---ccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhH
Q 025534 20 NVALTGYRKSCWYEEEI---EENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPA 96 (251)
Q Consensus 20 ~~~~~~~~~~~w~~~~~---~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~ 96 (251)
.-.+|+..++.=+ +.+ .++....+.++++|++.+|+||+|.|++++.+|++|++||.+|++++| +.|+|+|++.+
T Consensus 106 ~~~~~~~~~g~~~-~~~~~~~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~ 183 (364)
T 2qfm_A 106 VKRLPPIVRGGAI-DRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSG 183 (364)
T ss_dssp EECCCCEEESCSS-CCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTT
T ss_pred cccCCCccCCCcc-CceeEccCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhh
Confidence 3456777655312 232 246788889999999999999999999999999999999999999999 99999999887
Q ss_pred hhcCCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc-ccCCCCCC---CeEEEEcchHHHHhc-
Q 025534 97 LLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFSDP---RLELVINDARAELES- 171 (251)
Q Consensus 97 ~~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~~~---rv~~~~~D~~~~l~~- 171 (251)
+ .++++++||+||||+|++++++++++. .+|++||+|++++++|+++++. ++..+++| |++++++|+++|+++
T Consensus 184 ~-~~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~ 261 (364)
T 2qfm_A 184 K-EDYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 261 (364)
T ss_dssp C-CCCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred h-hCCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhh
Confidence 6 678899999999999999999999864 7999999999999999999873 32234454 899999999999975
Q ss_pred --CCCceeEEEEcCCC-CCCCCcccCCccHHHHHHHH----cccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCc
Q 025534 172 --RKESYDVIIGDLAD-PIEGGPCYKLYTKSFYEFVV----KPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKC 244 (251)
Q Consensus 172 --~~~~fD~Ii~D~~~-~~~~~p~~~l~~~ef~~~~~----~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~ 244 (251)
.+++||+||+|+++ |....| ..|++.+||+. + +++|+|||+++++++++. . .+......+.+++.|+.
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p-~~L~t~eFy~~-~~~~~~~~L~pgGilv~qs~s~~--~-~e~~~~~~~~l~~~F~~ 336 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSP-EEDSTWEFLRL-ILDLSMKVLKQDGKYFTQGNCVN--L-TEALSLYEEQLGRLYCP 336 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC-----CHHHHHHH-HHHHHHHTEEEEEEEEEEEEETT--C-HHHHHHHHHHHTTSSSC
T ss_pred hccCCCceEEEECCCCcccCcCc-hhhhHHHHHHH-HHHHHHhhCCCCcEEEEEcCCcc--h-HHHHHHHHHHHHHhCCc
Confidence 46889999999998 653345 35899999999 6 899999999999998762 2 44444444459999999
Q ss_pred eee
Q 025534 245 GYN 247 (251)
Q Consensus 245 v~~ 247 (251)
|..
T Consensus 337 v~~ 339 (364)
T 2qfm_A 337 VEF 339 (364)
T ss_dssp EEE
T ss_pred eEE
Confidence 874
No 13
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=6e-36 Score=264.59 Aligned_cols=222 Identities=32% Similarity=0.589 Sum_probs=188.3
Q ss_pred CCCccccceEEeeec--cccceeeeeccEEEEeecCCCcEEEEEec---CceeEEEEcCccccccccchhHHHHHHHhHh
Q 025534 23 LTGYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTK---PFGKALVIDGKLQSAEVDEFIYHESLVHPAL 97 (251)
Q Consensus 23 ~~~~~~~~w~~~~~~--~~~~~~~~~~~~l~~~~s~~~~i~v~~~~---~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~ 97 (251)
..+....+|+.|..+ ++....+...++|++.+|+||+|.|++++ .+|+.|++||.+|+++.+++.|++++.++++
T Consensus 11 ~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l 90 (304)
T 3bwc_A 11 GSELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSL 90 (304)
T ss_dssp -CCCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHH
T ss_pred CCccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhh
Confidence 345667889999988 89999999999999999999999999998 7899999999999999999999999999888
Q ss_pred hcCCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCce
Q 025534 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESY 176 (251)
Q Consensus 98 ~~~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~f 176 (251)
+.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.......+++++++.+|+.+++.. .+++|
T Consensus 91 ~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 91 CSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred hcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCce
Confidence 87788899999999999999999998666799999999999999999885211113568999999999999865 46789
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh-CCceeeec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGYNLT 249 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~~~~ 249 (251)
|+|++|.+++. .|...+++.+|++. ++++|+|||+++++..+| +......+.+.++|+++ |+.+..|.
T Consensus 171 DvIi~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 171 DVVIIDTTDPA--GPASKLFGEAFYKD-VLRILKPDGICCNQGESI--WLDLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp EEEEEECC-----------CCHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred eEEEECCCCcc--ccchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--ccchHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999998776 45567889999999 799999999999998776 56677889999999999 99887764
No 14
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=1.6e-36 Score=263.00 Aligned_cols=200 Identities=16% Similarity=0.232 Sum_probs=178.0
Q ss_pred ceEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCCCeEEEE
Q 025534 30 CWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIM 109 (251)
Q Consensus 30 ~w~~~~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~~~VL~i 109 (251)
+|++|..+++.+..+.+.++|++.+|+||+|.|++++.+|++|++||. |+++.+++.|++++.+++++.++++++||+|
T Consensus 1 ~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~i 79 (262)
T 2cmg_A 1 MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIV 79 (262)
T ss_dssp CEEEEEEETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred CcEEEEcCCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEE
Confidence 599999999999999999999999999999999999999999999999 9999999999999999998888889999999
Q ss_pred ecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCC
Q 025534 110 GGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEG 189 (251)
Q Consensus 110 G~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~ 189 (251)
|||+|.++++++++ + .+|++||+|+++++.|+++++.....+.++|++++.+|+++++ ++||+|++|+++|.
T Consensus 80 G~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~dp~-- 151 (262)
T 2cmg_A 80 DGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEPDI-- 151 (262)
T ss_dssp SSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSCCCH--
T ss_pred eCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCCChH--
Confidence 99999999999998 6 8999999999999999999864211134689999999999886 68999999975432
Q ss_pred CcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeecc
Q 025534 190 GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLTL 250 (251)
Q Consensus 190 ~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~~ 250 (251)
.|++. ++++|+|||+++++.++| +...+.++++.++++++|+++.+|..
T Consensus 152 ---------~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~ 200 (262)
T 2cmg_A 152 ---------HRIDG-LKRMLKEDGVFISVAKHP--LLEHVSMQNALKNMGGVFSVAMPFVA 200 (262)
T ss_dssp ---------HHHHH-HHTTEEEEEEEEEEEECT--TTCHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ---------HHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHhCCceEEEEE
Confidence 38999 799999999999998776 45667889999999999999987753
No 15
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=2e-35 Score=264.40 Aligned_cols=217 Identities=35% Similarity=0.655 Sum_probs=188.9
Q ss_pred ccccceEEeee--ccccceeeeeccEEEEeecCCCcEEEEEecCceeEEEEcCccccccccchhHHHHHHHhHhhcCCCC
Q 025534 26 YRKSCWYEEEI--EENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNP 103 (251)
Q Consensus 26 ~~~~~w~~~~~--~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~l~ldg~~q~~~~~~~~y~e~l~~~~~~~~~~~ 103 (251)
....+|+.|.. .++.+..+.+.++|++.+|+||+|.|+++..+|+.|++||.+|+++++++.|++++++++++.++++
T Consensus 42 ~~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~ 121 (334)
T 1xj5_A 42 TVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNP 121 (334)
T ss_dssp CCCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCC
T ss_pred ccccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCC
Confidence 44678999885 4789999999999999999999999999999999999999999999999999999999988877888
Q ss_pred CeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEc
Q 025534 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGD 182 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D 182 (251)
++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++++|+.+++... .++||+|++|
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d 201 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVD 201 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEEC
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEEC
Confidence 999999999999999999986667999999999999999999864211134689999999999998653 4789999999
Q ss_pred CCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceee
Q 025534 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYN 247 (251)
Q Consensus 183 ~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (251)
+++|. .+...+++.+|++. ++++|+|||+++++.+++ +.....+..+.++++++|+.+..
T Consensus 202 ~~~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~ 261 (334)
T 1xj5_A 202 SSDPI--GPAKELFEKPFFQS-VARALRPGGVVCTQAESL--WLHMDIIEDIVSNCREIFKGSVN 261 (334)
T ss_dssp CCCTT--SGGGGGGSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCcc--CcchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--cccHHHHHHHHHHHHHhCccccc
Confidence 98776 34456778999999 799999999999998776 66777788899999999995443
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=2.7e-31 Score=235.17 Aligned_cols=185 Identities=24% Similarity=0.304 Sum_probs=156.3
Q ss_pred cCCCcEEEEEecC--ceeEEEEcCcccccc------ccchhHHHHHHHhHhh---cCCCCC--eEEEEecCchHHHHHHH
Q 025534 55 TRYQDIALLDTKP--FGKALVIDGKLQSAE------VDEFIYHESLVHPALL---HHPNPK--TIFIMGGGEGSTAREIL 121 (251)
Q Consensus 55 s~~~~i~v~~~~~--~g~~l~ldg~~q~~~------~~~~~y~e~l~~~~~~---~~~~~~--~VL~iG~G~G~~~~~l~ 121 (251)
..|...+|..... +|++|++||..|++. .+++.|+|+|++.+++ .+++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 3455577877653 799999999999974 5789999999998886 467766 99999999999999999
Q ss_pred hcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCccHHH
Q 025534 122 RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSF 200 (251)
Q Consensus 122 ~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~~~l~~~ef 200 (251)
++.+..+|++||+|+++++.||++|+.. .++|++++++|+++++... +++||+|++|.+++. .+..+|++.+|
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t~ef 182 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA--ITPQNFTTVEF 182 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSBHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc--ccchhhhHHHH
Confidence 9433459999999999999999999764 3689999999999999754 578999999998776 33468999999
Q ss_pred HHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeeec
Q 025534 201 YEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNLT 249 (251)
Q Consensus 201 ~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~~ 249 (251)
|+. ++++|+|||++++|..++ .....++.++++|+++|+++..|.
T Consensus 183 l~~-~~r~LkpgGvlv~~~~~~---~~~~~~~~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 183 FEH-CHRGLAPGGLYVANCGDH---SDLRGAKSELAGMMEVFEHVAVIA 227 (317)
T ss_dssp HHH-HHHHEEEEEEEEEEEEEC---TTCHHHHHHHHHHHHHCSEEEEEE
T ss_pred HHH-HHHhcCCCcEEEEEecCC---cchHHHHHHHHHHHHHCCceEEEE
Confidence 999 799999999999998643 234678899999999999998874
No 17
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=1.6e-15 Score=123.66 Aligned_cols=109 Identities=10% Similarity=0.093 Sum_probs=87.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~I 179 (251)
.++.+|||+|||+|.++..+++. +..+|++||+|+.+++.|++++..++ .++++++++|+.++.... .++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhccCCCccEE
Confidence 46789999999999999988875 45689999999999999999987653 268999999999987543 5789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcc--cCCCCcEEEEecC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKP--RLNPEGIFVTQAG 220 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~--~L~pgG~l~~~~~ 220 (251)
++|++... .. -...++++. +.+ +|+|||++++...
T Consensus 118 ~~~~p~~~--~~---~~~~~~l~~-~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNV--DS---ADVDAILAA-LGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTS--CH---HHHHHHHHH-HHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCc--ch---hhHHHHHHH-HHhcCccCCCeEEEEEec
Confidence 99976432 10 113467777 677 9999999998763
No 18
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=8e-16 Score=130.51 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=87.1
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 178 (251)
.+++.||||||||+|.++..++++.+ .++++||+||.+++.|++++... ..+++++.+|+.+.+.. ..++||.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeehHHhhcccccccCCce
Confidence 35778999999999999999988754 68999999999999999987643 36899999999887754 3578999
Q ss_pred EEEcCCCCCCCCcccCCc-cHHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLADPIEGGPCYKLY-TKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~-~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+.|..... ....+.. ...++++ ++++|||||+|++.
T Consensus 132 i~~D~~~~~--~~~~~~~~~~~~~~e-~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 132 ILYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp EEECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred EEEeeeecc--cchhhhcchhhhhhh-hhheeCCCCEEEEE
Confidence 999976322 1112222 3467888 79999999999864
No 19
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.60 E-value=1.4e-14 Score=121.63 Aligned_cols=129 Identities=15% Similarity=0.217 Sum_probs=99.7
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCceeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~I 179 (251)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|+++....+ .++++++.+|+.+++.. .+++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCCChheE
Confidence 5678999999999999999886555789999999999999999876442 35799999999998653 46799999
Q ss_pred EEcCCCCCCCCc--ccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~p--~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++..++|+.... ...+...++++. +.++|||||++.+.+. .......+...+.+.
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~-~~r~LkpGG~l~i~td------~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAEL-VKSKLQLGGVFHMATD------WEPYAEHMLEVMSSI 166 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHTS
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHH-HHHHcCCCcEEEEEeC------CHHHHHHHHHHHHhC
Confidence 998777663211 123455689999 7999999999998753 234555666666543
No 20
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=4.8e-15 Score=127.53 Aligned_cols=132 Identities=14% Similarity=0.193 Sum_probs=95.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc---ccCCCCCCCeEEEEcchHHHHh------c
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV---NKEAFSDPRLELVINDARAELE------S 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~---~~~~~~~~rv~~~~~D~~~~l~------~ 171 (251)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++.. ++ ...+++++.+|+.++.. .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~---l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA---FSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT---TGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC---CcceEEEEeCCHHHHhhhhhhhcc
Confidence 456799999999999999998875557999999999999999999875 42 23479999999988743 1
Q ss_pred CCCceeEEEEcCCCCCCCC---c------c---cCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHH
Q 025534 172 RKESYDVIIGDLADPIEGG---P------C---YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~~~---p------~---~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~ 239 (251)
..++||+|++|++.....+ + + ......++++. +.++|+|||.+++... .+.+..+.+.++
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-------~~~~~~~~~~l~ 183 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRT-ASAIMVSGGQLSLISR-------PQSVAEIIAACG 183 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHH-HHHHEEEEEEEEEEEC-------GGGHHHHHHHHT
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHH-HHHHcCCCCEEEEEEc-------HHHHHHHHHHHH
Confidence 2478999999976422100 0 0 01123578888 7999999999987542 224556777777
Q ss_pred hhCC
Q 025534 240 QVFK 243 (251)
Q Consensus 240 ~~F~ 243 (251)
+.|.
T Consensus 184 ~~~~ 187 (260)
T 2ozv_A 184 SRFG 187 (260)
T ss_dssp TTEE
T ss_pred hcCC
Confidence 6554
No 21
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=9.1e-15 Score=123.42 Aligned_cols=104 Identities=22% Similarity=0.394 Sum_probs=86.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh-cCCCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~-~~~~~fD~Ii 180 (251)
++++|||||||+|..+..+++..+..+|++||+++.+++.|++++...+ ..++++++.+|+.+++. ...++||+|+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH---FENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 5789999999999999999985445799999999999999999987543 23589999999998776 5567899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|.... ...++++. +.+.|+|||++++.
T Consensus 148 ~~~~~~---------~~~~~l~~-~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 148 IDAAKA---------QSKKFFEI-YTPLLKHQGLVITD 175 (232)
T ss_dssp EETTSS---------SHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EcCcHH---------HHHHHHHH-HHHhcCCCeEEEEe
Confidence 996421 13578898 79999999999883
No 22
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=8e-15 Score=123.33 Aligned_cols=103 Identities=16% Similarity=0.223 Sum_probs=85.1
Q ss_pred CeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEE
Q 025534 104 KTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIG 181 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~ 181 (251)
.+|||||||+|..+..+++. ++..+|++||+|+++++.|++++...+ +.+++++++.+|+.+++... +++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 39999999999999999885 435799999999999999999987543 12268999999999998764 579999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|.... ...++++. +.++|+|||++++.
T Consensus 136 d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVSPM---------DLKALVDA-AWPLLRRGGALVLA 162 (221)
T ss_dssp CCCTT---------THHHHHHH-HHHHEEEEEEEEET
T ss_pred cCcHH---------HHHHHHHH-HHHHcCCCcEEEEe
Confidence 96421 12468898 69999999999984
No 23
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.6e-14 Score=121.96 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=86.3
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC--CceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK--ESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~--~~fD~ 178 (251)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++.... ++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG---VDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 578999999999999999998633 5799999999999999999986543 24689999999999886543 48999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|++|...+ ....+++. +.+.|+|||++++..
T Consensus 140 V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDADKP---------NNPHYLRW-ALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEEC
T ss_pred EEECCchH---------HHHHHHHH-HHHhcCCCeEEEEeC
Confidence 99986421 12468898 799999999998754
No 24
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.56 E-value=5.7e-14 Score=116.73 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=98.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh-cCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~-~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++..+..++++||+++.+++.|++++...+ -++++++.+|+.++.. ...++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 35678999999999999999887555799999999999999999876542 2689999999987432 234689999
Q ss_pred EEcCCCCCCCCc--ccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~p--~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+++.++|+.... ...+...++++. +.++|+|||++++.+. .......+.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~~~~~ 172 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDT-FKRILPENGEIHFKTD------NRGLFEYSLVSFSQY 172 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHSCTTCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EEECCCCccccchhhhccCCHHHHHH-HHHHcCCCcEEEEEeC------CHHHHHHHHHHHHHC
Confidence 999887652110 012345789999 7999999999998753 233455666666554
No 25
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=2.1e-14 Score=118.77 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=84.2
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++..++ .++++++.+|+.+++....++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 46799999999999999877753 4699999999999999999987553 268999999999988655678999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHc--ccCCCCcEEEEecC
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAG 220 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~--~~L~pgG~l~~~~~ 220 (251)
|++... . ...++++. +. ++|+|||++++...
T Consensus 129 ~~p~~~--~-----~~~~~l~~-l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFRR--G-----LLEETINL-LEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSST--T-----THHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred CCCCCC--C-----cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 976321 1 12456666 54 46999999988764
No 26
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.55 E-value=2.5e-14 Score=122.56 Aligned_cols=127 Identities=15% Similarity=0.172 Sum_probs=92.7
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii 180 (251)
++.+|||+|||+|.++..+++..+ .+|++||+++.+++.|++++..++ ...+++++.+|+.++.... .++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~---~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ---LEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT---CTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC---CcccEEEEECcHHHhhhhhccCCccEEE
Confidence 578999999999999999998754 499999999999999999987653 2358999999999886432 57899999
Q ss_pred EcCCCCCC-----CCcc--cC-------CccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHh
Q 025534 181 GDLADPIE-----GGPC--YK-------LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 181 ~D~~~~~~-----~~p~--~~-------l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (251)
+|++.... ..+. .. ....++++. +.+.|+|||++++-.. + ..+..+...+++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-~------~~~~~~~~~l~~ 190 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRV-AASLLKQGGKANFVHR-P------ERLLDIIDIMRK 190 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHH-HHHHEEEEEEEEEEEC-T------TTHHHHHHHHHH
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHH-HHHHccCCcEEEEEEc-H------HHHHHHHHHHHH
Confidence 99873211 0000 00 112468888 7999999999998432 1 224455566654
No 27
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.55 E-value=1.8e-14 Score=119.05 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=85.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCc-eeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKES-YDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~-fD~I 179 (251)
++.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++..++ +..++++++.+|+.+++.. .+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 46799999999999999877753 4699999999999999999987543 1125899999999998654 2468 9999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHH--cccCCCCcEEEEecCC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~--~~~L~pgG~l~~~~~~ 221 (251)
++|++... . ...++++. + .++|+|||++++...+
T Consensus 130 ~~~~~~~~--~-----~~~~~l~~-~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 130 FLDPPFHF--N-----LAEQAISL-LCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EECCCSSS--C-----HHHHHHHH-HHHTTCEEEEEEEEEEEES
T ss_pred EECCCCCC--c-----cHHHHHHH-HHhcCccCCCcEEEEEECC
Confidence 99976221 1 12466777 6 5789999999887644
No 28
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.55 E-value=5e-14 Score=117.75 Aligned_cols=107 Identities=12% Similarity=0.188 Sum_probs=84.7
Q ss_pred CCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC-----Cc
Q 025534 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----ES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~-----~~ 175 (251)
++++|||||||+|..+..+++. ++..+|++||+++.+++.|++++...+ ..++++++.+|+.+++.... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG---LQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC---CCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 5789999999999999999985 335799999999999999999987543 23579999999999876543 68
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
||+|++|...+. .....++++. + ++|+|||++++..
T Consensus 135 fD~V~~d~~~~~------~~~~~~~~~~-~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDR------YLPDTLLLEK-C-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGG------HHHHHHHHHH-T-TCCCTTCEEEESC
T ss_pred eEEEEEcCCccc------chHHHHHHHh-c-cccCCCeEEEEeC
Confidence 999999964221 1112356776 5 9999999999864
No 29
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.55 E-value=9.5e-14 Score=115.80 Aligned_cols=130 Identities=10% Similarity=0.114 Sum_probs=97.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh-cCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~-~~~~~fD~I 179 (251)
.+..+|||||||+|.++..+++..+..++++||+++.+++.|+++....+ .++++++.+|+.++.. -..+.||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 35678999999999999999886555799999999999999999876442 3579999999988532 235689999
Q ss_pred EEcCCCCCCCCc--ccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~p--~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+++.++|+.... ...+...++++. +.++|+|||.+++.+. .......+.+.+.+.
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~-~~~~LkpgG~l~~~td------~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKK-YEEVMGKGGSIHFKTD------NRGLFEYSLKSFSEY 169 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHHTTSCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EEECCCCCcCccccccccCcHHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 998777653111 123456789999 7999999999998752 234455555555553
No 30
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.55 E-value=1.5e-14 Score=116.26 Aligned_cols=109 Identities=14% Similarity=0.198 Sum_probs=86.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+ ..++++++.+|+.+++....++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK---AENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT---CGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 45689999999999999999887 44699999999999999999886542 235799999999998765557899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHc--ccCCCCcEEEEecCC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAGP 221 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~--~~L~pgG~l~~~~~~ 221 (251)
+|++... ....++++. +. ++|+|||++++....
T Consensus 106 ~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LDPPYAK-------ETIVATIEA-LAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ECCSSHH-------HHHHHHHHH-HHHTTCEEEEEEEEEEEET
T ss_pred ECCCCCc-------chHHHHHHH-HHhCCCcCCCcEEEEEECC
Confidence 9965211 112466777 55 899999999987644
No 31
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=2.8e-14 Score=118.17 Aligned_cols=103 Identities=21% Similarity=0.306 Sum_probs=84.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++...++ ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG---LIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS---GGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCceEEEEEecHHHHhccCCC-CCEEE
Confidence 568999999999999999988633 5799999999999999999886432 235899999999998765556 99999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|... .....+++. +.++|+|||++++.
T Consensus 132 ~~~~~---------~~~~~~l~~-~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 132 MDCDV---------FNGADVLER-MNRCLAKNALLIAV 159 (210)
T ss_dssp EETTT---------SCHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EcCCh---------hhhHHHHHH-HHHhcCCCeEEEEE
Confidence 99531 123578998 79999999999884
No 32
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.54 E-value=3.2e-14 Score=118.64 Aligned_cols=106 Identities=17% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC----CCc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KES 175 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----~~~ 175 (251)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN---LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3578999999999999999998643 4799999999999999999987543 2467999999999876532 257
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
||+|++|...+ ...++++. +.+.|+|||++++..
T Consensus 134 fD~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADKQ---------NNPAYFEW-ALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEES
T ss_pred cCEEEEcCCcH---------HHHHHHHH-HHHhcCCCcEEEEeC
Confidence 99999996521 12578898 799999999998753
No 33
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.54 E-value=2.6e-14 Score=122.15 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=85.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC------C
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~ 173 (251)
.++++|||||||+|..+..+++. ++..+|+++|+|+++++.|++++...+ ..++++++.+|+.+++... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG---VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 46789999999999999999886 325799999999999999999987543 2468999999999887542 5
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
++||+|++|.... ....+++. +.++|+|||++++.
T Consensus 155 ~~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADKD---------NYLNYHKR-LIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCST---------THHHHHHH-HHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCchH---------HHHHHHHH-HHHhCCCCeEEEEe
Confidence 7899999996421 13578898 79999999999874
No 34
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.54 E-value=1.6e-13 Score=110.74 Aligned_cols=128 Identities=17% Similarity=0.228 Sum_probs=96.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+ ..+++++++.+|+.+.+. .++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~~~--~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNN--LDNYDIRVVHSDLYENVK--DRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTT--CTTSCEEEEECSTTTTCT--TSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECchhcccc--cCCceEEE
Confidence 46689999999999999999887 3699999999999999999886542 122259999999887543 56899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCcee
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (251)
++++.+. .. -...++++. +.++|+|||.+++.... ......+.+.|++.|..+.
T Consensus 125 ~~~~~~~--~~---~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~l~~~~~~~~ 178 (194)
T 1dus_A 125 TNPPIRA--GK---EVLHRIIEE-GKELLKDNGEIWVVIQT------KQGAKSLAKYMKDVFGNVE 178 (194)
T ss_dssp ECCCSTT--CH---HHHHHHHHH-HHHHEEEEEEEEEEEES------THHHHHHHHHHHHHHSCCE
T ss_pred ECCCccc--ch---hHHHHHHHH-HHHHcCCCCEEEEEECC------CCChHHHHHHHHHHhcceE
Confidence 9875332 11 123578888 79999999999987632 2334456677777776554
No 35
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.54 E-value=3e-14 Score=122.88 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=83.0
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcC--CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
.+++.+|||||||+|..+..+++.. +..+|++||+++.|++.|++++...+ ...+++++++|+.++ ..++||
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~~~~---~~~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDIRDI---AIENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCTTTC---CCCSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeecccccc---cccccc
Confidence 4567899999999999999998752 34589999999999999999876432 346899999998764 236799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|++...-++. .+ .....++++ +++.|||||++++.
T Consensus 142 ~v~~~~~l~~~-~~---~~~~~~l~~-i~~~LkpGG~lii~ 177 (261)
T 4gek_A 142 MVVLNFTLQFL-EP---SERQALLDK-IYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEESCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred cceeeeeeeec-Cc---hhHhHHHHH-HHHHcCCCcEEEEE
Confidence 99987643321 11 112357898 79999999999874
No 36
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.54 E-value=2.6e-14 Score=115.37 Aligned_cols=109 Identities=18% Similarity=0.215 Sum_probs=85.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 177 (251)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++..++ ..++++++.+|+.+++.. ..++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITK---EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhC---CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 35689999999999999988885 44699999999999999999887542 235899999999987642 257899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHH--cccCCCCcEEEEecCC
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAGP 221 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~--~~~L~pgG~l~~~~~~ 221 (251)
+|++|++... ....+.++. + .++|+|||++++....
T Consensus 119 ~i~~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAK-------QEIVSQLEK-MLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGG-------CCHHHHHHH-HHHTTCEEEEEEEEEEEET
T ss_pred EEEECCCCCc-------hhHHHHHHH-HHHhcccCCCCEEEEEeCC
Confidence 9999976211 112455665 6 7899999999987643
No 37
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.53 E-value=1.7e-13 Score=109.70 Aligned_cols=120 Identities=24% Similarity=0.228 Sum_probs=90.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++...+ ...++ ++.+|+.+.+....++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~-~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG---VSDRI-AVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT---CTTSE-EEECCTTGGGGGCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC---CCCCE-EEecchHhhhhccCCCCCEEE
Confidence 45679999999999999999887555799999999999999999876542 22478 888998776655447899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++...+. .++++. +.+.|+|||.+++.... .+....+.+.+++.
T Consensus 100 ~~~~~~~----------~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 100 IGGGLTA----------PGVFAA-AWKRLPVGGRLVANAVT------VESEQMLWALRKQF 143 (178)
T ss_dssp ECC-TTC----------TTHHHH-HHHTCCTTCEEEEEECS------HHHHHHHHHHHHHH
T ss_pred ECCcccH----------HHHHHH-HHHhcCCCCEEEEEeec------cccHHHHHHHHHHc
Confidence 8754321 467888 79999999999987532 23344455555544
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=1.2e-13 Score=111.71 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|..+..+++. ..+|++||+|+.+++.|++++...+ -++++++.+|........+++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG----IENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 45689999999999999999987 3699999999999999999887543 26899999887664323357899999
Q ss_pred EcCC-CCCCCCcc--cCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLA-DPIEGGPC--YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~-~~~~~~p~--~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++. .+...... ..-....+++. +.++|||||++++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEK-ILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEC-----------CHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCCCCCcchhcccChhhHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9842 22100000 00112367788 789999999988765
No 39
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.53 E-value=2.7e-14 Score=121.11 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=86.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC------C
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~ 173 (251)
.++++||+||||+|..+..+++. ++..+|+++|+|+++++.|++++...+ ..++++++.+|+.+++... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG---VEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 46789999999999999999886 335799999999999999999987543 2468999999999887542 4
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++||+|++|.... ...++++. +.++|+|||++++..
T Consensus 146 ~~fD~I~~d~~~~---------~~~~~l~~-~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDADKP---------NYIKYHER-LMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred CCcCEEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEec
Confidence 7899999995321 13578998 799999999998853
No 40
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=3.4e-14 Score=118.56 Aligned_cols=105 Identities=21% Similarity=0.282 Sum_probs=85.2
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC-----Cc
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----ES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~-----~~ 175 (251)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++.... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG---LSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC---CCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 568999999999999999998632 5799999999999999999986543 24679999999988875422 78
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
||+|++|.... ...++++. +.++|+|||++++..
T Consensus 141 fD~v~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 141 YDLIYIDADKA---------NTDLYYEE-SLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHH---------HHHHHHHH-HHHhcCCCcEEEEeC
Confidence 99999986421 13468888 799999999998753
No 41
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=2.2e-14 Score=117.96 Aligned_cols=134 Identities=13% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 177 (251)
.++.+|||+|||+|.++..+++..+..+++++|+|+.+++.|++++..++ . +++++.+|+.+.+.. ..++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG----A-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC----C-ceEEEEcchHhhhhhhhhccCccc
Confidence 56789999999999999999987545699999999999999999876542 1 789999999987653 237899
Q ss_pred EEEEcCCCCCCCC------------cccCCc--------cHHHHHHHHcccCCCCcE-EEEecCCCCCCCChHHHHHHHH
Q 025534 178 VIIGDLADPIEGG------------PCYKLY--------TKSFYEFVVKPRLNPEGI-FVTQAGPAGIFSHTEVFSCIYN 236 (251)
Q Consensus 178 ~Ii~D~~~~~~~~------------p~~~l~--------~~ef~~~~~~~~L~pgG~-l~~~~~~p~~~~~~~~~~~i~~ 236 (251)
+|++|++...... |...+. -.++++. ++++|+|||+ +++... ....+.+..++.
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL-PPYVLARGRAGVFLEVG----HNQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTC-CGGGBCSSSEEEEEECT----TSCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH-HHHHhcCCCeEEEEEEC----CccHHHHHHHHH
Confidence 9999987322100 000000 0567787 6899999999 666543 233444444444
Q ss_pred HHHhhCCc
Q 025534 237 TLRQVFKC 244 (251)
Q Consensus 237 ~l~~~F~~ 244 (251)
.++.-|..
T Consensus 179 ~~~~gf~~ 186 (215)
T 4dzr_A 179 PWRERGFR 186 (215)
T ss_dssp GGGGGTEE
T ss_pred HhhcCCce
Confidence 22333543
No 42
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.52 E-value=1.9e-13 Score=112.57 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=94.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++...+ .++++++.+|+.+.+.. .++||+|+
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~i~ 113 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEGLDD-LPDPDRVF 113 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTTCTT-SCCCSEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhhhhc-CCCCCEEE
Confidence 45689999999999999999987656799999999999999999887543 26899999998776543 26799999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++...+ ...++++. +.+.|+|||++++... ..+....+.+.+++.
T Consensus 114 ~~~~~~---------~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 114 IGGSGG---------MLEEIIDA-VDRRLKSEGVIVLNAV------TLDTLTKAVEFLEDH 158 (204)
T ss_dssp ESCCTT---------CHHHHHHH-HHHHCCTTCEEEEEEC------BHHHHHHHHHHHHHT
T ss_pred ECCCCc---------CHHHHHHH-HHHhcCCCeEEEEEec------ccccHHHHHHHHHHC
Confidence 986532 23478898 7999999999998652 234455666666654
No 43
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=3e-14 Score=122.61 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=80.2
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.+...+|||||||+|.++..++++. .+|++||+|+.|++.|++ .++++++++|+.+. .-.+++||+|
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~-~~~~~sfD~v 103 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT-GLPPASVDVA 103 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC-CCCSSCEEEE
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh-cccCCcccEE
Confidence 3566899999999999999999864 589999999999987764 36899999998764 3346899999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++...-++. ....++++ ++++|||||+|++..
T Consensus 104 ~~~~~~h~~-------~~~~~~~e-~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHWF-------DLDRFWAE-LRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTTC-------CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEeeehhHh-------hHHHHHHH-HHHHcCCCCEEEEEE
Confidence 997654442 23578999 799999999998765
No 44
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=6.8e-14 Score=111.21 Aligned_cols=104 Identities=14% Similarity=0.100 Sum_probs=83.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---CCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~~~fD~ 178 (251)
++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++..++ . +++++.+|+.+++... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTG----L-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHT----C-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcC----C-ceEEEeccHHHHHHhhhccCCceEE
Confidence 66899999999999999999874 349999999999999999887553 1 7999999999876432 348999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHc--ccCCCCcEEEEecCC
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAGP 221 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~--~~L~pgG~l~~~~~~ 221 (251)
|+++++.. . . ..++++. +. ++|+|||++++...+
T Consensus 114 i~~~~~~~-~-~------~~~~~~~-~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 114 AFMAPPYA-M-D------LAALFGE-LLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEECCCTT-S-C------TTHHHHH-HHHHTCEEEEEEEEEEEET
T ss_pred EEECCCCc-h-h------HHHHHHH-HHhhcccCCCcEEEEEeCC
Confidence 99997532 1 1 2366777 67 999999999987643
No 45
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.51 E-value=8e-14 Score=116.65 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=93.6
Q ss_pred CCCCeEEEEecC-chHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGG-EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+||| +|.++..+++.. ..+|+++|+|+.+++.|++++..++ .+++++.+|+..+....+++||+|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-----SNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-----CCCEEEECSSCSSTTTCCSCEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-----CCcEEEeCCchhhhhcccCceeEE
Confidence 467899999999 999999998864 3699999999999999999987653 279999999754322234789999
Q ss_pred EEcCCCCCCCC-----cc--------cCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGG-----PC--------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~-----p~--------~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++|++...... +. ......++++. +.+.|+|||.+++... ........+.+.+++.
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~l~~~ 196 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE-AFDHLNPGGKVALYLP-----DKEKLLNVIKERGIKL 196 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHH-HGGGEEEEEEEEEEEE-----SCHHHHHHHHHHHHHT
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHH-HHHHhCCCeEEEEEec-----ccHhHHHHHHHHHHHc
Confidence 99987322100 00 00112678998 7999999999988642 2234566777777765
No 46
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=9.8e-15 Score=124.38 Aligned_cols=104 Identities=21% Similarity=0.355 Sum_probs=85.7
Q ss_pred CCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-----CCc
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~~~ 175 (251)
++++|||||||+|..+..+++.. +..+|++||+++++++.|++++...+ ..++++++.+|+.+++... .++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK---QEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT---CTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 57899999999999999998853 35799999999999999999987543 2468999999999987643 478
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
||+|++|.... ...++++. +.+.|+|||++++.
T Consensus 137 fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 137 FDFIFIDADKT---------NYLNYYEL-ALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEEESCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EeEEEEcCChH---------HhHHHHHH-HHHhcCCCeEEEEE
Confidence 99999996411 13468888 79999999999884
No 47
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.51 E-value=1.9e-13 Score=116.21 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=96.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ ...+++++.+|+.+.+ ..++||+|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~v 166 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG---FDDRVTIKLKDIYEGI--EEENVDHV 166 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT---CTTTEEEECSCGGGCC--CCCSEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC---CCCceEEEECchhhcc--CCCCcCEE
Confidence 45689999999999999999987 545799999999999999999986543 2356999999998764 34679999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh---CCceee
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV---FKCGYN 247 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~---F~~v~~ 247 (251)
++|+++++ ++++. +.+.|+|||.+++... ..+....+.+.+++. |..+..
T Consensus 167 ~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 167 ILDLPQPE-----------RVVEH-AAKALKPGGFFVAYTP------CSNQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EECSSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHTGGGBSCCEE
T ss_pred EECCCCHH-----------HHHHH-HHHHcCCCCEEEEEEC------CHHHHHHHHHHHHHcCCCccccEE
Confidence 99876432 45777 6899999999998652 234556667777665 655543
No 48
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=8.8e-14 Score=121.71 Aligned_cols=103 Identities=10% Similarity=0.180 Sum_probs=81.7
Q ss_pred cCCCCCeEEEEecCchHHH-HHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 99 HHPNPKTIFIMGGGEGSTA-REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 99 ~~~~~~~VL~iG~G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
...++.+||+||||+|.++ ..+++.+ ..+|++||+|+++++.|++++...+ . .+++++.+|+.++ . +++||
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~g---l-~~v~~v~gDa~~l-~--d~~FD 190 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLG---V-DGVNVITGDETVI-D--GLEFD 190 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHT---C-CSEEEEESCGGGG-G--GCCCS
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcC---C-CCeEEEECchhhC-C--CCCcC
Confidence 3456899999999988765 4455544 4799999999999999999987543 2 6899999999885 2 57899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+++...+ . ..++++. +.++|||||++++..
T Consensus 191 vV~~~a~~~---d------~~~~l~e-l~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 191 VLMVAALAE---P------KRRVFRN-IHRYVDTETRIIYRT 222 (298)
T ss_dssp EEEECTTCS---C------HHHHHHH-HHHHCCTTCEEEEEE
T ss_pred EEEECCCcc---C------HHHHHHH-HHHHcCCCcEEEEEc
Confidence 999975411 1 2478998 799999999999875
No 49
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=1.3e-13 Score=125.15 Aligned_cols=130 Identities=12% Similarity=0.105 Sum_probs=93.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 177 (251)
.++++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ +.+.+++++.+|+.+++.. .+++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 45689999999999999999985 45699999999999999999988764 1222899999999998754 246899
Q ss_pred EEEEcCCCCCCC-CcccCC--ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHH
Q 025534 178 VIIGDLADPIEG-GPCYKL--YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (251)
Q Consensus 178 ~Ii~D~~~~~~~-~p~~~l--~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~ 236 (251)
+|++|+|..... ...... .-.++++. +.+.|+|||++++.+.++. ...+.+..++.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~-~~~~L~pgG~l~~~~~~~~--~~~~~~~~~i~ 346 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQ-GLEILSENGLIIASTNAAN--MTVSQFKKQIE 346 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHH-HHHTEEEEEEEEEEECCTT--SCHHHHHHHHH
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCCc--CCHHHHHHHHH
Confidence 999998752100 000001 01245566 5799999999998887652 33444444443
No 50
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=117.06 Aligned_cols=133 Identities=12% Similarity=0.081 Sum_probs=93.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhccc--CCCCCCCeEEEEcchHHHHh--cCCCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSDPRLELVINDARAELE--SRKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~~rv~~~~~D~~~~l~--~~~~~f 176 (251)
.+..+|||||||+|.++..+++..+...|++||+++.+++.|++++.... .....++++++.+|+.+++. -..++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34568999999999999999887555799999999999999998754210 00123689999999987554 235789
Q ss_pred eEEEEcCCCCCCCC--cccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHh
Q 025534 177 DVIIGDLADPIEGG--PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 177 D~Ii~D~~~~~~~~--p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (251)
|.|++..++|+... ....+....+++. +.++|+|||.+++.+. .......+.+.|.+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~-~~~~LkpGG~l~~~td------~~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAE-YAYVLRVGGLVYTITD------VLELHDWMCTHFEE 183 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHT
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHH-HHHHCCCCCEEEEEeC------CHHHHHHHHHHHHH
Confidence 99999877765211 0123445689999 7999999999998753 23444555555554
No 51
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.50 E-value=1.5e-14 Score=125.58 Aligned_cols=125 Identities=16% Similarity=0.080 Sum_probs=95.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++... .+|+++|+|+.+++.|++++..++ ..++++++.+|+.++.. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~---~~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNK---VEDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECCHHHhcc--cCCccEEE
Confidence 4578999999999999999998743 389999999999999999988664 23579999999988764 57899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (251)
+|++.. ..++++. +.++|+|||++++...++......+.+..+.+.+++..
T Consensus 198 ~~~p~~----------~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G 248 (278)
T 2frn_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYG 248 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTT
T ss_pred ECCchh----------HHHHHHH-HHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcC
Confidence 997621 1356777 68999999999987644311122334556666666543
No 52
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=8.3e-14 Score=117.43 Aligned_cols=109 Identities=9% Similarity=0.080 Sum_probs=82.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++.. ..+|++||+++.+++.|+++.... .++++++.+|+.+.+.. .+++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 456799999999999999997754 358999999999999999987643 26899999999987533 35789999
Q ss_pred EEcCCCCCCCCcccCCc-cHHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLY-TKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~-~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
++|.+... .+..+.. ...+++. ++++|||||++++.
T Consensus 133 ~~d~~~~~--~~~~~~~~~~~~l~~-~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred EECCcccc--hhhhhhhhHHHHHHH-HHHhcCCCeEEEEE
Confidence 99644211 1111111 1256888 79999999999863
No 53
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=1.8e-13 Score=115.87 Aligned_cols=121 Identities=17% Similarity=0.189 Sum_probs=91.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCceeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~I 179 (251)
++.+|||||||+|..+..++...+..+|++||+++.+++.|++++...+ -++++++++|+.++... ..++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccCCccEE
Confidence 5689999999999999888864345799999999999999999876542 24699999999886421 24789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+++... . ...+++. +.++|+|||.+++..+.. ..+.+..+.+.++..
T Consensus 146 ~~~~~~----~------~~~~l~~-~~~~LkpgG~l~~~~g~~----~~~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 146 TARAVA----R------LSVLSEL-CLPLVKKNGLFVALKAAS----AEEELNAGKKAITTL 192 (240)
T ss_dssp EEECCS----C------HHHHHHH-HGGGEEEEEEEEEEECC-----CHHHHHHHHHHHHHT
T ss_pred EEeccC----C------HHHHHHH-HHHhcCCCCEEEEEeCCC----chHHHHHHHHHHHHc
Confidence 998631 1 2478888 799999999998875432 234455566666543
No 54
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=1.7e-13 Score=122.17 Aligned_cols=129 Identities=12% Similarity=0.176 Sum_probs=91.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---CCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~~~fD 177 (251)
.++.+|||+|||+|.++..+++. +. +|++||+|+.+++.|++++..++ +.+.+++++++|+++++... .++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga-~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GA-EVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCce
Confidence 35679999999999999999985 43 99999999999999999987664 22236999999999987532 56899
Q ss_pred EEEEcCCCCCCCCcccCCc-----cHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHH
Q 025534 178 VIIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~-----~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~ 236 (251)
+|++|+|.... .+...++ ..++++. +.++|+|||++++...... ....+.+..+++
T Consensus 228 ~Ii~dPP~~~~-~~~~~~~~~~~~~~~ll~~-~~~~LkpgG~lli~~~~~~-~~~~~~~~~~l~ 288 (332)
T 2igt_A 228 IILTDPPKFGR-GTHGEVWQLFDHLPLMLDI-CREILSPKALGLVLTAYSI-RASFYSMHELMR 288 (332)
T ss_dssp EEEECCCSEEE-CTTCCEEEHHHHHHHHHHH-HHHTBCTTCCEEEEEECCT-TSCHHHHHHHHH
T ss_pred EEEECCccccC-CchHHHHHHHHHHHHHHHH-HHHhcCcCcEEEEEECCCC-CCCHHHHHHHHH
Confidence 99999873110 1111111 2467887 6899999999665543221 223444554444
No 55
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=5.9e-13 Score=115.00 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=87.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++..++ .++++++.+|+.+.+. .++||+|+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~----~~~v~~~~~d~~~~~~--~~~fD~Iv 181 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA----IKNIHILQSDWFSALA--GQQFAMIV 181 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCSTTGGGT--TCCEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEcchhhhcc--cCCccEEE
Confidence 35679999999999999999876455799999999999999999987543 2479999999987643 46899999
Q ss_pred EcCCCCCC-----------CCcccCC--------ccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLADPIE-----------GGPCYKL--------YTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~~~~~-----------~~p~~~l--------~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
++++.... ..|...+ ....+++. +.+.|+|||.+++..+
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~-~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQ-SRNALVSGGFLLLEHG 239 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHH-HGGGEEEEEEEEEECC
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHH-HHHhcCCCCEEEEEEC
Confidence 99874221 0121122 12567888 7999999999998754
No 56
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.48 E-value=1.6e-13 Score=112.15 Aligned_cols=115 Identities=13% Similarity=0.041 Sum_probs=86.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ ..++++++.+|+.++....+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN---LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT---CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHhhhccCCceEE
Confidence 45689999999999999999886 234599999999999999999987542 23689999999988754455789999
Q ss_pred EEcCCC-CCCCCcc--cCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLAD-PIEGGPC--YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~-~~~~~p~--~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++++. +...... ......++++. +.++|+|||++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSK-AMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHH-HHHhCcCCCEEEEEE
Confidence 999753 2110000 00012468888 799999999998765
No 57
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.48 E-value=6.1e-13 Score=110.19 Aligned_cols=117 Identities=16% Similarity=0.168 Sum_probs=91.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++. ..+|++||+++++++.|++++...+ ...+++++.+|+.+.+.. .++||+|+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~-~~~~D~v~ 127 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG---LSPRMRAVQGTAPAALAD-LPLPEAVF 127 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCTTGGGTT-SCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCEEEEeCchhhhccc-CCCCCEEE
Confidence 45689999999999999999987 3699999999999999999876543 123899999999886543 35799999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++... ..++++. +.+.|+|||++++... ..+....+.+.+++.
T Consensus 128 ~~~~~-----------~~~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 128 IGGGG-----------SQALYDR-LWEWLAPGTRIVANAV------TLESETLLTQLHARH 170 (204)
T ss_dssp ECSCC-----------CHHHHHH-HHHHSCTTCEEEEEEC------SHHHHHHHHHHHHHH
T ss_pred ECCcc-----------cHHHHHH-HHHhcCCCcEEEEEec------CcccHHHHHHHHHhC
Confidence 87521 1237888 7999999999998753 244566666666655
No 58
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=2.8e-13 Score=111.61 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=83.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|.++..+++.+ ..+++++|+++.+++.|++++...+ ..++++++.+|+.+. ....++||+|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~~D~v~~ 117 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQS-DFSIRALDFSKHMNEIALKNIADAN---LNDRIQIVQGDVHNI-PIEDNYADLIVS 117 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHS-EEEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECBTTBC-SSCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHhcc---ccCceEEEEcCHHHC-CCCcccccEEEE
Confidence 44599999999999999999873 4699999999999999999876543 246899999998763 233578999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-+.... ..++++. ++++|+|||.+++..
T Consensus 118 ~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 118 RGSVFFWED------VATAFRE-IYRILKSGGKTYIGG 148 (219)
T ss_dssp ESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CchHhhccC------HHHHHHH-HHHhCCCCCEEEEEe
Confidence 864222111 2578888 799999999998864
No 59
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.48 E-value=4.3e-13 Score=114.74 Aligned_cols=121 Identities=18% Similarity=0.239 Sum_probs=91.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~ 178 (251)
..+.+|||||||+|..+..++...+..+|++||+++.+++.|+++....+ -.+++++++|+.++... ..++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCCCceE
Confidence 35689999999999999988876555799999999999999999987543 24699999999887542 2478999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHh
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (251)
|++....+ -..+++. +.+.|+|||.+++..+.. ..+.+..+.+.++.
T Consensus 155 I~s~a~~~----------~~~ll~~-~~~~LkpgG~l~~~~g~~----~~~e~~~~~~~l~~ 201 (249)
T 3g89_A 155 AVARAVAP----------LCVLSEL-LLPFLEVGGAAVAMKGPR----VEEELAPLPPALER 201 (249)
T ss_dssp EEEESSCC----------HHHHHHH-HGGGEEEEEEEEEEECSC----CHHHHTTHHHHHHH
T ss_pred EEECCcCC----------HHHHHHH-HHHHcCCCeEEEEEeCCC----cHHHHHHHHHHHHH
Confidence 99975421 1478888 799999999998766432 23444455555443
No 60
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=1.8e-13 Score=117.26 Aligned_cols=106 Identities=14% Similarity=0.095 Sum_probs=85.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++...+ ..++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG---LQNRVTGIVGSMDDL-PFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC---CCcCcEEEEcChhhC-CCCCCCEEEEE
Confidence 45789999999999999999997 44699999999999999999876442 246899999998664 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.. +...++++. ++++|+|||.+++..
T Consensus 120 ~~~~~~~-------~~~~~~l~~-~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 120 SEGAIYN-------IGFERGLNE-WRKYLKKGGYLAVSE 150 (267)
T ss_dssp ESSCGGG-------TCHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EcCCcee-------cCHHHHHHH-HHHHcCCCCEEEEEE
Confidence 9854222 223578998 799999999998764
No 61
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=1.8e-13 Score=114.36 Aligned_cols=105 Identities=20% Similarity=0.320 Sum_probs=85.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---C--C
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--E 174 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~--~ 174 (251)
.++++|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... . +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE---AEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 357899999999999999999863 25799999999999999999987543 2468999999998876532 1 6
Q ss_pred ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 175 ~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+||+|++|++.. ...++++. +.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADKE---------NCSAYYER-CLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCST---------THHHHHHH-HHHHEEEEEEEEEE
T ss_pred CccEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 899999986521 12478888 79999999999884
No 62
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=1.7e-13 Score=115.27 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=85.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC--CCceeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~fD~I 179 (251)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++... +++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG---LESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 5679999999999999999887545799999999999999999986543 2358999999998865543 4789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+++...+ ...++++. +.+.|+|||++++.
T Consensus 131 ~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG---------QYRRFFDM-YSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS---------CHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 9986421 13578888 79999999999886
No 63
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.45 E-value=5.8e-13 Score=129.44 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=90.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++++|||+|||+|.++..+++. +..+|++||+|+.+++.|++++..++ +..++++++++|+++++....++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG--LTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 5789999999999999998885 45689999999999999999998764 22358999999999998776789999999
Q ss_pred cCCCCCCCCcccCCc-----cHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 182 DLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 182 D~~~~~~~~p~~~l~-----~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
|+|...........+ -.++++. +.++|+|||++++.+++.
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~-a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKD-LKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHH-HHHHEEEEEEEEEEECCT
T ss_pred CCccccCCccchhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCc
Confidence 997421101000111 2356777 689999999999877653
No 64
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.45 E-value=4.9e-13 Score=113.64 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=88.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCC----CCCCCeEEEEcchHHHHhc--CCCc
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----FSDPRLELVINDARAELES--RKES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~----~~~~rv~~~~~D~~~~l~~--~~~~ 175 (251)
++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++..+... ...++++++.+|+.+++.. ..+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457899999999999999998754468999999999999999887543100 0125799999999886653 3578
Q ss_pred eeEEEEcCCCCCCCCc--ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p--~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|.|++..++++.... ...+...++++. +.++|+|||++++.+
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~-~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSE-YAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHH-HHHHcCCCCEEEEEe
Confidence 9999988776652110 123345789999 799999999999864
No 65
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.45 E-value=2.9e-13 Score=114.83 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=84.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKAN---CADRVKGITGSMDNL-PFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECChhhC-CCCCCCEEEEE
Confidence 4567999999999999999998754 499999999999999999876543 245799999998653 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+. +...++++. ++++|+|||++++..
T Consensus 120 ~~~~l~~-------~~~~~~l~~-~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYN-------IGFERGMNE-WSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCC-------CCHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred ecChHhh-------cCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9864322 123578898 799999999998764
No 66
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.44 E-value=3.8e-13 Score=111.69 Aligned_cols=109 Identities=21% Similarity=0.289 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCC-CCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++..+..+|++||+|+.+++.|++++...+-. ...++++++.+|+.. .....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY-RDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS-CCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc-cccccCCCCEE
Confidence 4578999999999999999998755579999999999999999987643200 011389999999733 22234789999
Q ss_pred EEcCCCCCCCCcccCCcc---HHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~---~ef~~~~~~~~L~pgG~l~~~ 218 (251)
++...-. ++.. ..+++. +++.|+|||+++..
T Consensus 107 ~~~~~l~-------~~~~~~~~~~l~~-~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIE-------HLDENRLQAFEKV-LFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGG-------GCCHHHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred EEHHHHH-------hCCHHHHHHHHHH-HHHhhCCCEEEEEc
Confidence 9875321 2221 478898 79999999977754
No 67
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.44 E-value=5.4e-13 Score=115.33 Aligned_cols=107 Identities=18% Similarity=0.305 Sum_probs=85.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+|++||+++.+++.|++.+...+ ..++++++.+|+.+.....+++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-G-HQVILCDLSAQMIDRAKQAAEAKG---VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHC-C---CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcC---CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 45689999999999999999987 3 599999999999999999876432 236899999999887544568999999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-..... ...+++. ++++|+|||++++..
T Consensus 142 ~~~~l~~~~~------~~~~l~~-~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEWVAD------PRSVLQT-LWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhcccC------HHHHHHH-HHHHcCCCeEEEEEE
Confidence 9754322111 2578898 799999999998764
No 68
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.44 E-value=4.4e-13 Score=117.04 Aligned_cols=110 Identities=18% Similarity=0.081 Sum_probs=84.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ...+++++.+|+.++ +++||+|+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v~ 142 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD---SPRRKEVRIQGWEEF----DEPVDRIV 142 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC---CSSCEEEEECCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECCHHHc----CCCccEEE
Confidence 4567999999999999999998744 689999999999999999876542 235899999999875 57899999
Q ss_pred EcCCCCCCCCcc---cCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPC---YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~---~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+....|. ..-....+++. ++++|+|||++++..
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKK-FYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHH-HHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 975422111110 01122578998 799999999999875
No 69
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.44 E-value=2.8e-13 Score=114.30 Aligned_cols=105 Identities=22% Similarity=0.314 Sum_probs=84.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---C--Cc
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--ES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~--~~ 175 (251)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++... + ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG---VAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 568999999999999999998632 4699999999999999999886442 2358999999998876532 2 68
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
||+|++|...+ ...++++. +.+.|+|||++++..
T Consensus 149 fD~V~~d~~~~---------~~~~~l~~-~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKR---------NYPRYYEI-GLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHTEEEEEEEEEEC
T ss_pred cCEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEeC
Confidence 99999996411 12578888 799999999998853
No 70
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.44 E-value=5.1e-13 Score=110.86 Aligned_cols=112 Identities=17% Similarity=0.162 Sum_probs=81.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCC-CCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++...+-. ...++++++.+|+.. .....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY-QDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS-CCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc-ccccCCCcCEE
Confidence 3568999999999999999998755579999999999999999987643200 001389999999742 22234789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
++...-... .+ -...++++. ++++|+|||++++.
T Consensus 107 ~~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 107 TVIEVIEHL-DL---SRLGAFERV-LFEFAQPKIVIVTT 140 (217)
T ss_dssp EEESCGGGC-CH---HHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred eeHHHHHcC-CH---HHHHHHHHH-HHHHcCCCEEEEEc
Confidence 987542210 10 012478888 79999999988764
No 71
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.43 E-value=1.9e-12 Score=117.70 Aligned_cols=134 Identities=21% Similarity=0.233 Sum_probs=96.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---CCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~~~fD 177 (251)
.++++|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++..++ +..++++++.+|+.+++... +++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 466899999999999999999863 5699999999999999999988763 10238999999999987532 46899
Q ss_pred EEEEcCCCCCCCCcc--cC--CccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHH-HHHHhh
Q 025534 178 VIIGDLADPIEGGPC--YK--LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY-NTLRQV 241 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~--~~--l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~-~~l~~~ 241 (251)
+|++|+|.... ... .. -...+++.. +.+.|+|||++++.+.+. ....+.+..++ +.+.+.
T Consensus 296 ~Ii~dpP~~~~-~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~--~~~~~~~~~~i~~~~~~~ 360 (396)
T 3c0k_A 296 VIVMDPPKFVE-NKSQLMGACRGYKDINML-AIQLLNEGGILLTFSCSG--LMTSDLFQKIIADAAIDA 360 (396)
T ss_dssp EEEECCSSTTT-CSSSSSCCCTHHHHHHHH-HHHTEEEEEEEEEEECCT--TCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCC-ChhHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCC--cCCHHHHHHHHHHHHHHc
Confidence 99999874211 110 00 112467777 689999999999877654 22333334433 355544
No 72
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=1.9e-12 Score=117.80 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=85.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++++|||+|||+|.++..+++. +. +|++||+|+.+++.|++++..++- ..++.++|+++++....++||+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~ng~-----~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GA-YALAVDKDLEALGVLDQAALRLGL-----RVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHhCC-----CCcEEEccHHHHHHHhcCCCCEEEE
Confidence 4789999999999999999986 43 599999999999999999887641 2357799999998764445999999
Q ss_pred cCCCCCCCCcccCCc-----cHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 182 DLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 182 D~~~~~~~~p~~~l~-----~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
|+|.... .. ..+. ..++++. +.+.|+|||++++.+.++
T Consensus 287 dpP~f~~-~~-~~~~~~~~~~~~ll~~-a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 287 DPPTLVK-RP-EELPAMKRHLVDLVRE-ALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCCCS-SG-GGHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred CCCcCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCC
Confidence 9874211 11 1111 1367777 689999999998766554
No 73
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=3.3e-12 Score=102.83 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=93.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++...+ ..++++++.+|+.+.+... ++||+|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~-~~~D~v~ 105 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG---LGDNVTLMEGDAPEALCKI-PDIDIAV 105 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT---CCTTEEEEESCHHHHHTTS-CCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC---CCcceEEEecCHHHhcccC-CCCCEEE
Confidence 456899999999999999998864 699999999999999999876542 2368999999998866432 5899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++.+.+. ..++++. +.+.|+|||.+++... ..+....+.+.+++.
T Consensus 106 ~~~~~~~---------~~~~l~~-~~~~l~~gG~l~~~~~------~~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 106 VGGSGGE---------LQEILRI-IKDKLKPGGRIIVTAI------LLETKFEAMECLRDL 150 (192)
T ss_dssp ESCCTTC---------HHHHHHH-HHHTEEEEEEEEEEEC------BHHHHHHHHHHHHHT
T ss_pred ECCchHH---------HHHHHHH-HHHhcCCCcEEEEEec------CcchHHHHHHHHHHC
Confidence 9854211 2578898 7999999999988652 234456666777665
No 74
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=2.7e-13 Score=117.39 Aligned_cols=124 Identities=15% Similarity=0.057 Sum_probs=94.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++ -++++++.+|+.++ .. .++||+|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~-~~~~D~Vi 191 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL-KDVADRVI 191 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC-TTCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc-cCCceEEE
Confidence 45689999999999999999987445699999999999999999988663 25789999999987 43 57899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (251)
+|++. + ..+++.. +.+.|+|||++++.+.+.. -...+.+.+.++.+++.+
T Consensus 192 ~d~p~----~------~~~~l~~-~~~~LkpgG~l~~s~~~~~-~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 192 MGYVH----K------THKFLDK-TFEFLKDRGVIHYHETVAE-KIMYERPIERLKFYAEKN 241 (272)
T ss_dssp ECCCS----S------GGGGHHH-HHHHEEEEEEEEEEEEEEG-GGTTTHHHHHHHHHHHHT
T ss_pred ECCcc----c------HHHHHHH-HHHHcCCCCEEEEEEcCcc-ccccccHHHHHHHHHHHh
Confidence 99763 1 1256777 6889999999987664321 011234556666666543
No 75
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.43 E-value=1.3e-12 Score=113.94 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=85.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCce---eE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY---DV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f---D~ 178 (251)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+++...++ ...+++++++|+.+.+. ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~---l~~~v~~~~~D~~~~~~---~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHG---VSDRFFVRKGEFLEPFK---EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTT---CTTSEEEEESSTTGGGG---GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcchhhcc---cccCCCCE
Confidence 4579999999999999999988 56799999999999999999987543 23479999999988653 478 99
Q ss_pred EEEcCCCCCC---------CCcccCCc----cHHHHHHHHc-ccCCCCcEEEEecC
Q 025534 179 IIGDLADPIE---------GGPCYKLY----TKSFYEFVVK-PRLNPEGIFVTQAG 220 (251)
Q Consensus 179 Ii~D~~~~~~---------~~p~~~l~----~~ef~~~~~~-~~L~pgG~l~~~~~ 220 (251)
|++|+|.... ..|...++ ..++++. +. +.|+|||.+++..+
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~-i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYRE-FFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHH-HHHHCCCTTCEEEEECC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHH-HHHhcCCCCCEEEEEEC
Confidence 9999873210 01100000 1278999 78 99999999998764
No 76
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.42 E-value=5e-13 Score=113.31 Aligned_cols=106 Identities=20% Similarity=0.140 Sum_probs=82.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ..++++++.+|+.+... +++||+|+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~~~~v~~~~~d~~~~~~--~~~fD~V~ 108 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELG---VSERVHFIHNDAAGYVA--NEKCDVAA 108 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCCTTCCC--SSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECChHhCCc--CCCCCEEE
Confidence 4568999999999999999988653 589999999999999999876432 23589999999877532 57899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+....... + ....+++. ++++|||||.+++..
T Consensus 109 ~~~~~~~~--~----~~~~~l~~-~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 109 CVGATWIA--G----GFAGAEEL-LAQSLKPGGIMLIGE 140 (256)
T ss_dssp EESCGGGT--S----SSHHHHHH-HTTSEEEEEEEEEEE
T ss_pred ECCChHhc--C----CHHHHHHH-HHHHcCCCeEEEEec
Confidence 85432111 1 13578898 799999999988753
No 77
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=4.3e-13 Score=113.30 Aligned_cols=105 Identities=20% Similarity=0.321 Sum_probs=84.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC--------
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-------- 172 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-------- 172 (251)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG---LENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHHHHHHHhhccccc
Confidence 568999999999999999988633 4699999999999999999986442 2357999999998876532
Q ss_pred -------C-CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 -------K-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 -------~-~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+ ++||+|+++...+ ...++++. +.+.|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE---------NYPNYYPL-ILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH---------HHHHHHHH-HHHHcCCCeEEEEEc
Confidence 2 6899999985311 12478888 799999999998854
No 78
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.42 E-value=3.4e-13 Score=112.97 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=82.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++... ++++++.+|+.+... .++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~--~~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF--EEKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC--CSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC--CCCceEEE
Confidence 4568999999999999999998754579999999999999999987532 389999999876532 27899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. + .....++++. ++++|+|||.+++..
T Consensus 115 ~~~~l~~~--~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHHL--E--DEDKKELYKR-SYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGGS--C--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCccccC--C--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 98542221 1 0111258898 799999999998754
No 79
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.41 E-value=1.1e-12 Score=113.40 Aligned_cols=118 Identities=19% Similarity=0.256 Sum_probs=91.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+ ..++||+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~V 185 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG---LIERVTIKVRDISEGF--DEKDVDAL 185 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT---CGGGEEEECCCGGGCC--SCCSEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHcc--cCCccCEE
Confidence 45679999999999999999886 445799999999999999999876432 1257999999998763 23689999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
++|+++++ ++++. +.+.|+|||++++.... .+...++.+.|++.
T Consensus 186 ~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~~------~~~~~~~~~~l~~~ 229 (277)
T 1o54_A 186 FLDVPDPW-----------NYIDK-CWEALKGGGRFATVCPT------TNQVQETLKKLQEL 229 (277)
T ss_dssp EECCSCGG-----------GTHHH-HHHHEEEEEEEEEEESS------HHHHHHHHHHHHHS
T ss_pred EECCcCHH-----------HHHHH-HHHHcCCCCEEEEEeCC------HHHHHHHHHHHHHC
Confidence 99875432 45677 68999999999987521 23455666666653
No 80
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=2e-12 Score=117.12 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=95.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD~ 178 (251)
++++|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++.. .+++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~----~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG----LGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT----CTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999986 4699999999999999999988764 23499999999998754 2578999
Q ss_pred EEEcCCCCCCCCcccCC-----ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHH-HHHHhhC
Q 025534 179 IIGDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY-NTLRQVF 242 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l-----~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~-~~l~~~F 242 (251)
|++|+|.... .+ ..+ ...+++.. +.+.|+|||++++.+.++ ....+.+..++ +.+.+..
T Consensus 283 Ii~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~--~~~~~~~~~~i~~~~~~~g 347 (382)
T 1wxx_A 283 VVLDPPAFAK-GK-KDVERAYRAYKEVNLR-AIKLLKEGGILATASCSH--HMTEPLFYAMVAEAAQDAH 347 (382)
T ss_dssp EEECCCCSCC-ST-TSHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCT--TSCHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCC-Ch-hHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCC--CCCHHHHHHHHHHHHHHcC
Confidence 9999874221 11 111 12457777 689999999999887654 23333333333 4555443
No 81
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.40 E-value=2.2e-12 Score=117.20 Aligned_cols=114 Identities=17% Similarity=0.156 Sum_probs=88.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD~ 178 (251)
++++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ ..++++++.+|+.+++.. ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~---~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG---VEDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC---CCccceEEECCHHHHHHHHHhhCCCCCE
Confidence 6689999999999999999986 45699999999999999999988664 223899999999998753 2578999
Q ss_pred EEEcCCCCCCCCcccCC-----ccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 179 IIGDLADPIEGGPCYKL-----YTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l-----~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
|++|+|.... .. ..+ ...+++.. +.+.|+|||++++.+.++
T Consensus 293 Vi~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 293 VVLDPPAFVQ-HE-KDLKAGLRAYFNVNFA-GLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEECCCCSCS-SG-GGHHHHHHHHHHHHHH-HHTTEEEEEEEEEEECCT
T ss_pred EEECCCCCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCC
Confidence 9999874221 11 111 12457777 689999999988877554
No 82
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.40 E-value=8.7e-13 Score=113.09 Aligned_cols=110 Identities=12% Similarity=-0.013 Sum_probs=79.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc-------c-CC-----CCCCCeEEEEcchHH
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-------K-EA-----FSDPRLELVINDARA 167 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-------~-~~-----~~~~rv~~~~~D~~~ 167 (251)
.++.+|||+|||+|..+..|++. + .+|++||+++.+++.|++..... . .. -..++++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999986 4 48999999999999998754310 0 00 013689999999987
Q ss_pred HHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 168 ~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
.-....++||+|+....-.. -+. -....+++. +.++|||||++++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~--l~~--~~~~~~l~~-~~~~LkpGG~l~l 189 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVA--INP--GDHDRYADI-ILSLLRKEFQYLV 189 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTT--SCG--GGHHHHHHH-HHHTEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhh--CCH--HHHHHHHHH-HHHHcCCCeEEEE
Confidence 54322378999997654222 111 113468888 7999999999853
No 83
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.40 E-value=1.1e-12 Score=118.63 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=85.2
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
.+.+|||+|||+|.++..+++..+..+|++||+|+.+++.|++++..++.. ...+++++.+|+.+.+ .+++||+|++
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~~~--~~~~fD~Ii~ 298 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGV--EPFRFNAVLC 298 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTTTC--CTTCEEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhccC--CCCCeeEEEE
Confidence 348999999999999999998755579999999999999999998755310 1236888999988754 3478999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|++.+..... ..-...++++. +.++|+|||++++-.
T Consensus 299 nppfh~~~~~-~~~~~~~~l~~-~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 299 NPPFHQQHAL-TDNVAWEMFHH-ARRCLKINGELYIVA 334 (375)
T ss_dssp CCCC--------CCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CCCcccCccc-CHHHHHHHHHH-HHHhCCCCcEEEEEE
Confidence 9875431111 11223478998 799999999998854
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.39 E-value=9.7e-13 Score=108.21 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=81.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++...+ .++++++.+|+.++. .++||+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~fD~i~ 130 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNG----IYDIALQKTSLLADV---DGKFDLIV 130 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT----CCCCEEEESSTTTTC---CSCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEeccccccC---CCCceEEE
Confidence 46789999999999999998886 44699999999999999999887543 234999999987753 47899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++.+.+ . ...+++. +.+.|+|||.+++..
T Consensus 131 ~~~~~~-------~--~~~~l~~-~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 131 ANILAE-------I--LLDLIPQ-LDSHLNEDGQVIFSG 159 (205)
T ss_dssp EESCHH-------H--HHHHGGG-SGGGEEEEEEEEEEE
T ss_pred ECCcHH-------H--HHHHHHH-HHHhcCCCCEEEEEe
Confidence 986421 1 2567788 799999999998853
No 85
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.39 E-value=2.4e-12 Score=106.61 Aligned_cols=101 Identities=17% Similarity=0.076 Sum_probs=79.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|.++..+++. + .+++++|+++.+++.+++.++ ++++++.+|+.++. .. ++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~-~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-G-RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFE-VP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCC-CC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcC-CC-CCeEEEEE
Confidence 6689999999999999999986 3 599999999999999998753 47899999987753 22 78999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-+. .+ ......+++. +++.|+|||.+++..
T Consensus 113 ~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHH--LT--DDEKNVAIAK-YSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred Ccchhc--CC--hHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 854222 11 0111348888 799999999998864
No 86
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.39 E-value=9.3e-13 Score=112.23 Aligned_cols=104 Identities=18% Similarity=0.265 Sum_probs=81.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++++...+ .++++++.+|+.+. ...+++||+|+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~l-~~~~~~fD~V~ 108 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQM-PFTDERFHIVT 108 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-CC-CSCTTCEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHhC-CCCCCCEEEEE
Confidence 467899999999999999998864 499999999999999999876432 35799999998763 33357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+...-++... ...++++ ++++|+|||.+++.
T Consensus 109 ~~~~l~~~~d------~~~~l~~-~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 109 CRIAAHHFPN------PASFVSE-AYRVLKKGGQLLLV 139 (260)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEE
T ss_pred EhhhhHhcCC------HHHHHHH-HHHHcCCCCEEEEE
Confidence 9854322111 2478898 79999999999875
No 87
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.39 E-value=6.9e-13 Score=109.77 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=81.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++++.. .++++++.+|+.++. ..++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS--TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC--CCCCccEEE
Confidence 345799999999999999998863 5999999999999999998753 258999999988764 457899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-++...+ -....+++. ++++|+|||++++..
T Consensus 120 ~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 120 VAEVLYYLEDM---TQMRTAIDN-MVKMLAPGGHLVFGS 154 (216)
T ss_dssp EESCGGGSSSH---HHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EccHHHhCCCH---HHHHHHHHH-HHHHcCCCCEEEEEe
Confidence 98542221011 001367888 799999999999853
No 88
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.39 E-value=8.3e-13 Score=108.57 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=82.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++...+ .++++++.+|+.++. ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~--~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP--SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC--CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC--ccCCcCEEEE
Confidence 4679999999999999999886445799999999999999999876542 245999999988754 2468999998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+...+ ...+++. +++.|+|||.+++..+
T Consensus 139 ~~~~~----------~~~~l~~-~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 139 RAFAS----------LNDMVSW-CHHLPGEQGRFYALKG 166 (207)
T ss_dssp SCSSS----------HHHHHHH-HTTSEEEEEEEEEEES
T ss_pred eccCC----------HHHHHHH-HHHhcCCCcEEEEEeC
Confidence 64311 2478888 7999999999998765
No 89
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.39 E-value=7.6e-13 Score=109.95 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=81.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.+.+|||||||+|.++..+++..+ +++++|+++.+++.|++++... .++++++.+|+.+. ....++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKL-SFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcC-CCCCCcEEEEE
Confidence 4478999999999999999888643 9999999999999999987644 26899999998763 22346899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++..-+.. .. ....++++. ++++|+|||.+++..
T Consensus 109 ~~~~~~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 109 FIDSIVHF-EP---LELNQVFKE-VRRVLKPSGKFIMYF 142 (227)
T ss_dssp EESCGGGC-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCchHhC-CH---HHHHHHHHH-HHHHcCCCcEEEEEe
Confidence 98651110 10 012468888 799999999998764
No 90
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.38 E-value=4.9e-12 Score=109.40 Aligned_cols=116 Identities=15% Similarity=0.065 Sum_probs=87.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~f 176 (251)
.++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+.++... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccccC
Confidence 456799999999999999988753 33699999999999999999887543 24899999999887542 25689
Q ss_pred eEEEEcCCCCCCCCccc-------------CCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 177 DVIIGDLADPIEGGPCY-------------KLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~-------------~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
|+|++|++.... +... .-...++++. +.+.|||||+++..+.+.
T Consensus 158 D~Vl~d~Pcs~~-g~~~~~p~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGN-IIKDKNRNVSEEDIKYCSLRQKELIDI-GIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC-------------HHHHTGGGTCHHHHHHH-HHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCC-cccccCCCCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEECCC
Confidence 999999874321 1000 0123678888 789999999999876543
No 91
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.38 E-value=1.5e-12 Score=112.50 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=90.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+ .+++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~--~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI--SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC--CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccC--cCCCccE
Confidence 35679999999999999999886 44579999999999999999987643 2 258999999988743 2468999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
|+++.+++. ++++. +.+.|+|||++++.... ......+.+.+++.
T Consensus 183 Vi~~~~~~~-----------~~l~~-~~~~LkpgG~l~i~~~~------~~~~~~~~~~l~~~ 227 (275)
T 1yb2_A 183 VIADIPDPW-----------NHVQK-IASMMKPGSVATFYLPN------FDQSEKTVLSLSAS 227 (275)
T ss_dssp EEECCSCGG-----------GSHHH-HHHTEEEEEEEEEEESS------HHHHHHHHHHSGGG
T ss_pred EEEcCcCHH-----------HHHHH-HHHHcCCCCEEEEEeCC------HHHHHHHHHHHHHC
Confidence 999865321 46777 68999999999987522 33455666666654
No 92
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=7.5e-13 Score=115.46 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=81.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCC-----------------------------
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----------------------------- 152 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~----------------------------- 152 (251)
++++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999998755579999999999999999986432100
Q ss_pred ------------------------C-CCCCeEEEEcchHHH----HhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHH
Q 025534 153 ------------------------F-SDPRLELVINDARAE----LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEF 203 (251)
Q Consensus 153 ------------------------~-~~~rv~~~~~D~~~~----l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~ 203 (251)
. -..+++++.+|+... +....++||+|++.....+..-....-....+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0 014899999997632 22245789999997542110000000023568898
Q ss_pred HHcccCCCCcEEEEec
Q 025534 204 VVKPRLNPEGIFVTQA 219 (251)
Q Consensus 204 ~~~~~L~pgG~l~~~~ 219 (251)
++++|+|||+|++..
T Consensus 206 -~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 -IYRHLRPGGILVLEP 220 (292)
T ss_dssp -HHHHEEEEEEEEEEC
T ss_pred -HHHHhCCCcEEEEec
Confidence 799999999999864
No 93
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.38 E-value=3.3e-13 Score=111.62 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccC--------CCCCCCeEEEEcchHHHHhcC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE--------AFSDPRLELVINDARAELESR 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~--------~~~~~rv~~~~~D~~~~l~~~ 172 (251)
+++.+|||+|||+|..+..+++. + .+|++||+|+.|++.|++....... .+..++++++++|+.+.-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 46789999999999999999987 3 5899999999999999987542100 001368999999987653211
Q ss_pred CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcE
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGI 214 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~ 214 (251)
.++||+|++...-.. -+. -....+++. ++++|||||+
T Consensus 99 ~~~fD~v~~~~~l~~--l~~--~~~~~~l~~-~~r~LkpgG~ 135 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIA--LPA--DMRERYVQH-LEALMPQACS 135 (203)
T ss_dssp HHSEEEEEEESCGGG--SCH--HHHHHHHHH-HHHHSCSEEE
T ss_pred CCCEEEEEECcchhh--CCH--HHHHHHHHH-HHHHcCCCcE
Confidence 158999998643211 110 112357888 7999999997
No 94
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.38 E-value=2.2e-12 Score=108.77 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=91.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++...+ .+++++++.+|+.+... .++.||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~-~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN---LGKNVKFFNVDFKDAEV-PEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT---CCTTEEEECSCTTTSCC-CTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC---CCCcEEEEEcChhhccc-CCCcccEEE
Confidence 35689999999999999999987 3699999999999999999876432 23689999999887531 246899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCce
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (251)
++++++ .++++. +.+.|+|||.+++... ..+....+.+.+++.|..+
T Consensus 164 ~~~~~~-----------~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 164 VDVREP-----------WHYLEK-VHKSLMEGAPVGFLLP------TANQVIKLLESIENYFGNL 210 (248)
T ss_dssp ECSSCG-----------GGGHHH-HHHHBCTTCEEEEEES------SHHHHHHHHHHSTTTEEEE
T ss_pred ECCcCH-----------HHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHhhCCcc
Confidence 986532 145677 6899999999998752 2345566666666545544
No 95
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.9e-12 Score=112.82 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-----CC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KE 174 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~~ 174 (251)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.... ...++++++++|+.+.-... .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP--DTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc--CCCCceEEEEcCHHhCCccccccccCC
Confidence 467899999999999999999642 45799999999999999999876431 02478999999987743221 16
Q ss_pred ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 175 ~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+||+|++...-++ +.-..+++. ++++|+|||.+++.
T Consensus 113 ~fD~V~~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 113 KIDMITAVECAHW-------FDFEKFQRS-AYANLRKDGTIAIW 148 (299)
T ss_dssp CEEEEEEESCGGG-------SCHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CeeEEeHhhHHHH-------hCHHHHHHH-HHHhcCCCcEEEEE
Confidence 8999999864332 233578998 79999999999873
No 96
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.8e-11 Score=97.80 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=90.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++ + ..+++++|+++.+++.+++++..++ -++++++.+|+.+.+.. ++||+|+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~~--~~~D~i~ 105 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK-R-CKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDVLDK--LEFNKAF 105 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT-T-SSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHHGGG--CCCSEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh-c-CCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCccccccC--CCCcEEE
Confidence 4567999999999999999988 3 4799999999999999999887542 25799999999985543 6899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (251)
++.+ . . ..++++. ++++ |||.+++... ....+..+.+.+++..
T Consensus 106 ~~~~-~---~------~~~~l~~-~~~~--~gG~l~~~~~------~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 106 IGGT-K---N------IEKIIEI-LDKK--KINHIVANTI------VLENAAKIINEFESRG 148 (183)
T ss_dssp ECSC-S---C------HHHHHHH-HHHT--TCCEEEEEES------CHHHHHHHHHHHHHTT
T ss_pred ECCc-c---c------HHHHHHH-HhhC--CCCEEEEEec------ccccHHHHHHHHHHcC
Confidence 9865 1 1 2477887 6766 9999988652 2445667777777654
No 97
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.38 E-value=2.6e-12 Score=109.01 Aligned_cols=118 Identities=13% Similarity=0.127 Sum_probs=91.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+. ....++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~-~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA-ELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC-CCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc-CCCCCCcCE
Confidence 45679999999999999999886 43479999999999999999987643 2 36899999998875 112368999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
|++|+++++ ++++. +.+.|+|||.+++... ..+...++.+.|++.
T Consensus 170 v~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~ 214 (258)
T 2pwy_A 170 VALDLMEPW-----------KVLEK-AALALKPDRFLVAYLP------NITQVLELVRAAEAH 214 (258)
T ss_dssp EEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHTTT
T ss_pred EEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 999865321 46777 6899999999998652 234556777777653
No 98
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.38 E-value=1.3e-12 Score=118.40 Aligned_cols=110 Identities=20% Similarity=0.311 Sum_probs=86.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||+|||+|.++..+++. + .+|++||+|+.+++.|++++..++ .+++++.+|+.+... ..++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g-~~V~gvDis~~al~~A~~n~~~~~-----~~v~~~~~D~~~~~~-~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-G-AEVVGVEDDLASVLSLQKGLEANA-----LKAQALHSDVDEALT-EEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-T-CEEEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTSC-TTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHcC-----CCeEEEEcchhhccc-cCCCeEEEEE
Confidence 5679999999999999999987 3 599999999999999999987653 348999999988653 2478999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
|++.+.. .....-...++++. ++++|+|||++++...+
T Consensus 305 npp~~~~-~~~~~~~~~~~l~~-~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 305 NPPFHVG-GAVILDVAQAFVNV-AAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCCTT-CSSCCHHHHHHHHH-HHHHEEEEEEEEEEECT
T ss_pred CCchhhc-ccccHHHHHHHHHH-HHHhcCcCcEEEEEEcC
Confidence 9875441 11011123578888 79999999999987643
No 99
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=1.9e-12 Score=106.74 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=81.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++...+ .++++++.+|+.+.... .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQGWQA-RAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccCCcc-CCCccEEE
Confidence 45789999999999999999987 3699999999999999999887542 34799999999875432 47899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
++...+. .+ +. +.+.|+|||++++....
T Consensus 149 ~~~~~~~--~~----------~~-~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPE--IP----------TA-LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSS--CC----------TH-HHHTEEEEEEEEEEECS
T ss_pred Eccchhh--hh----------HH-HHHhcccCcEEEEEEcC
Confidence 9865332 11 14 57899999999987644
No 100
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.37 E-value=2.2e-12 Score=110.44 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=83.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++++...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 134 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAAG---LANRVTFSYADAMDL-PFEDASFDAVW 134 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECccccC-CCCCCCccEEE
Confidence 4568999999999999999988644 699999999999999999876432 245899999998763 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.+... ...+++. ++++|+|||.+++..
T Consensus 135 ~~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHHMPD------RGRALRE-MARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTTSSC------HHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EechhhhCCC------HHHHHHH-HHHHcCCCeEEEEEE
Confidence 8754322111 2578898 799999999988764
No 101
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.37 E-value=1.2e-12 Score=112.44 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=85.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++..+..+|+++|+++.+++.+++++...+ .++++++.+|+.+.. ..+++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSLP-FEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGCC-SCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccCC-CCCCCeeEEE
Confidence 46789999999999999999987545799999999999999999876542 357999999988642 3357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-..... ...+++. ++++|+|||++++..
T Consensus 111 ~~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFVLEHLQS------PEEALKS-LKKVLKPGGTITVIE 142 (276)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EechhhhcCC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 9865322111 2478888 799999999998754
No 102
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.37 E-value=3.6e-12 Score=113.12 Aligned_cols=122 Identities=12% Similarity=0.215 Sum_probs=88.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhc-------ccCCCCCCCeEEEEcchHHHHhc-
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVV-------NKEAFSDPRLELVINDARAELES- 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~-------~~~~~~~~rv~~~~~D~~~~l~~- 171 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.. +...-..++++++.+|+.+.+..
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45689999999999999999886 3446999999999999999998762 21000135899999999875422
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHh
Q 025534 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (251)
..++||+|++|.+.++ .+++. +.++|+|||.+++... ........++.+++
T Consensus 184 ~~~~fD~V~~~~~~~~-----------~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH-----------VTLPV-FYPHLKHGGVCAVYVV------NITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTT-----------TTHHH-HGGGEEEEEEEEEEES------SHHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH-----------HHHHH-HHHhcCCCcEEEEEeC------CHHHHHHHHHHHHh
Confidence 2357999999976543 14677 7999999999997652 24455666666665
No 103
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=5.9e-13 Score=115.76 Aligned_cols=102 Identities=18% Similarity=0.099 Sum_probs=85.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..++++. ..+|+++|+||.+++.++++...|+ -..+++++.+|++++.. .+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~---v~~~v~~~~~D~~~~~~--~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNK---VEDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEeCcHHHhcc--ccCCCEEE
Confidence 567899999999999999999874 4689999999999999999998875 35689999999998863 47899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++++.. +.+|+.. +.+.|+|||++.+..
T Consensus 198 ~~~p~~----------~~~~l~~-a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEE
T ss_pred ECCCCc----------HHHHHHH-HHHHcCCCCEEEEEe
Confidence 997621 2367777 678999999987654
No 104
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.36 E-value=7.1e-12 Score=116.15 Aligned_cols=134 Identities=12% Similarity=0.072 Sum_probs=96.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++...+ -. ++++.+|+.++.....++||+|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHHCSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhccccCCEE
Confidence 456899999999999999998753 33689999999999999999987553 23 9999999998764346789999
Q ss_pred EEcCCCCCC----CCcccC-C-----------ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCC
Q 025534 180 IGDLADPIE----GGPCYK-L-----------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (251)
Q Consensus 180 i~D~~~~~~----~~p~~~-l-----------~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~ 243 (251)
++|+|.... ..|... . ...++++. +.+.|||||+++..+++. . .+....+++.+.+.+|
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvysTCs~---~-~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQ-ASRLLGPGGVLVYSTCTF---A-PEENEGVVAHFLKAHP 249 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESCC---C-GGGTHHHHHHHHHHCT
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeccC---c-hhcCHHHHHHHHHHCC
Confidence 999984211 012100 0 11678888 789999999999776543 2 2333445555555555
Q ss_pred c
Q 025534 244 C 244 (251)
Q Consensus 244 ~ 244 (251)
+
T Consensus 250 ~ 250 (464)
T 3m6w_A 250 E 250 (464)
T ss_dssp T
T ss_pred C
Confidence 3
No 105
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=1.9e-12 Score=108.50 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.++ ++++++.+|+.+. ..+++||+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------~~v~~~~~d~~~~--~~~~~fD~v~ 108 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK--------DGITYIHSRFEDA--QLPRRYDNIV 108 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC--------SCEEEEESCGGGC--CCSSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh--------CCeEEEEccHHHc--CcCCcccEEE
Confidence 356789999999999999998864 389999999999999998753 1799999998876 2457899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHc-ccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVK-PRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~-~~L~pgG~l~~~~ 219 (251)
+...-+.... ...++++ ++ ++|+|||.+++..
T Consensus 109 ~~~~l~~~~~------~~~~l~~-~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 109 LTHVLEHIDD------PVALLKR-INDDWLAEGGRLFLVC 141 (250)
T ss_dssp EESCGGGCSS------HHHHHHH-HHHTTEEEEEEEEEEE
T ss_pred EhhHHHhhcC------HHHHHHH-HHHHhcCCCCEEEEEc
Confidence 8754222111 2578898 79 9999999998865
No 106
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.35 E-value=2.4e-12 Score=106.17 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=80.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.+++. ..++++++.+|+.++ ...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL-A-DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH-S-SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC--CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC--CCCCceeEEE
Confidence 45579999999999999999987 3 5999999999999999982 236899999999876 3468999999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+. .+. -....+++. ++++|+|||.+++..
T Consensus 113 ~~~~l~~--~~~--~~~~~~l~~-~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 113 FAHWLAH--VPD--DRFEAFWES-VRSAVAPGGVVEFVD 146 (218)
T ss_dssp EESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eechhhc--CCH--HHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 9754221 110 001578888 799999999998764
No 107
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.35 E-value=6.5e-12 Score=105.92 Aligned_cols=105 Identities=18% Similarity=0.209 Sum_probs=82.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++...+ .++++++.+|+.+. ...+++||+|+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~-~~~~~~fD~v~ 92 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAESL-PFPDDSFDIIT 92 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTBC-CSCTTCEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEecccccC-CCCCCcEEEEE
Confidence 467899999999999999998864 499999999999999999876442 25799999998663 33357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+....++... ...+++. ++++|+|||.+++..
T Consensus 93 ~~~~l~~~~~------~~~~l~~-~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 93 CRYAAHHFSD------VRKAVRE-VARVLKQDGRFLLVD 124 (239)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhhccC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 9854222111 2578888 799999999988753
No 108
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.35 E-value=1.5e-12 Score=108.51 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=75.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~~fD~ 178 (251)
.++.+|||+|||+|..+..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+..... ...++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhcccccceeE
Confidence 356799999999999999988764346999999999987655543321 1468889999876411 12378999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+++...+. ....+++. +++.|||||.+++..
T Consensus 130 V~~~~~~~~--------~~~~~l~~-~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDIAQKN--------QIEILKAN-AEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEeccChh--------HHHHHHHH-HHHHhCCCCEEEEEE
Confidence 999954321 12345788 799999999998764
No 109
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.35 E-value=3.4e-12 Score=103.71 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=81.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+ .++++++.+|+.+.. . .++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G-YDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLT-F-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCC-C-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCC-C-CCCceEEE
Confidence 35679999999999999999986 3 599999999999999999876442 257999999987742 2 57899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+...-+.. .+ -....+++. ++++|+|||.+++.
T Consensus 103 ~~~~l~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 103 STVVLMFL-EA---KTIPGLIAN-MQRCTKPGGYNLIV 135 (199)
T ss_dssp EESCGGGS-CG---GGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred EcchhhhC-CH---HHHHHHHHH-HHHhcCCCeEEEEE
Confidence 98643221 11 123578888 79999999987653
No 110
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.35 E-value=4.5e-12 Score=106.86 Aligned_cols=106 Identities=9% Similarity=0.069 Sum_probs=84.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++ ...+++++.+|+.+.+.. .++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG---LKEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECchhhhccc-CcCCCEEE
Confidence 45679999999999999999987656799999999999999999988664 245899999999876632 23699998
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.- ... -.-.+++.. ..++|+++|.++++.
T Consensus 90 iaG-------~Gg-~~i~~Il~~-~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 90 IAG-------MGG-RLIARILEE-GLGKLANVERLILQP 119 (225)
T ss_dssp EEE-------ECH-HHHHHHHHH-TGGGCTTCCEEEEEE
T ss_pred EcC-------CCh-HHHHHHHHH-HHHHhCCCCEEEEEC
Confidence 742 111 113578888 689999999999975
No 111
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.35 E-value=6.7e-12 Score=108.04 Aligned_cols=119 Identities=18% Similarity=0.225 Sum_probs=91.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. ..++++++.+|+.+.. ...++||+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~-~~~~~~D~ 174 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSE-LPDGSVDR 174 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCC-CCTTCEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcC-CCCCceeE
Confidence 45679999999999999999885 33469999999999999999987643 10 1358999999987752 22468999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHh
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~ 240 (251)
|+++.++++ ++++. +.++|+|||.+++... ..+.+.++...+++
T Consensus 175 v~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 175 AVLDMLAPW-----------EVLDA-VSRLLVAGGVLMVYVA------TVTQLSRIVEALRA 218 (280)
T ss_dssp EEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHH
T ss_pred EEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHh
Confidence 999876432 45777 6899999999998752 23456677777775
No 112
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.35 E-value=3.3e-12 Score=110.37 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++.+...+ ..++++++.+|+.++ +++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~----~~~fD~v~ 134 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE---NLRSKRVLLAGWEQF----DEPVDRIV 134 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC---CCSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC---CCCCeEEEECChhhC----CCCeeEEE
Confidence 4567999999999999999985434 499999999999999999876432 246899999998653 27899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-... .+ -....+++. ++++|||||.+++..
T Consensus 135 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHF-GH---ERYDAFFSL-AHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGT-CT---TTHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeCchhhc-Ch---HHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87432110 10 113578898 799999999998865
No 113
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.34 E-value=1.5e-12 Score=110.44 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.+++. .++++++.+|+.++. .+++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---------~~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---------LPNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---------STTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---------CCCcEEEECChhhcC--ccCCcCEEE
Confidence 456899999999999999998863346899999999999999986 257899999987753 457899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-++. + ....+++. ++++|+|||.+++..
T Consensus 101 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQWV--P----DHLAVLSQ-LMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGGS--T----THHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EeCchhhC--C----CHHHHHHH-HHHhcCCCeEEEEEe
Confidence 97653321 1 13578888 799999999999876
No 114
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.34 E-value=2.3e-12 Score=109.22 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=81.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+. .++++++.+|+.+. ....++||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI-AIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC-CCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC-CCCCCCeEEEEE
Confidence 57899999999999999999874 3499999999999999998764 36899999998764 333578999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-.... ...++++. ++++|+|||.+++..
T Consensus 115 ~~~l~~~~------~~~~~l~~-~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 115 SLALHYIA------SFDDICKK-VYINLKSSGSFIFSV 145 (253)
T ss_dssp ESCGGGCS------CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred chhhhhhh------hHHHHHHH-HHHHcCCCcEEEEEe
Confidence 76422211 12578898 799999999999864
No 115
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.34 E-value=3.4e-12 Score=106.69 Aligned_cols=104 Identities=17% Similarity=0.175 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH--hcCCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--ESRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l--~~~~~~fD 177 (251)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.++++... .++++++.+|+.+.. ....++||
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------RRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------CTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------cCCCEEEEccCCCcchhhcccCCce
Confidence 35679999999999999999876 3346999999999999999887653 268999999987632 22346899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++|.+.+. ....+++. +.+.|+|||.+++..
T Consensus 146 ~v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 146 VIFEDVAQPT--------QAKILIDN-AEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEECCCCHh--------HHHHHHHH-HHHhcCCCCEEEEEE
Confidence 9999876321 12355888 799999999988753
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=2.5e-12 Score=108.04 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=80.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~~fD~ 178 (251)
.++.+|||+|||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... ...++||+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANIVEKVDV 146 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTTSCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccccccCccEEE
Confidence 356799999999999999999874456999999999999999987542 2689999999876211 11268999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+.+.+++. ....+++. +.+.|+|||.+++.
T Consensus 147 v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 147 IYEDVAQPN--------QAEILIKN-AKWFLKKGGYGMIA 177 (230)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEEecCChh--------HHHHHHHH-HHHhCCCCcEEEEE
Confidence 998754321 12467888 79999999998874
No 117
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.34 E-value=2.7e-12 Score=116.04 Aligned_cols=105 Identities=13% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
+++.|||||||+|.++..+++. ++.+|++||.++ +++.|++.+..++ ...+++++.+|..+. ..+++||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~---~~~~i~~i~~~~~~~--~lpe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNG---LEDRVHVLPGPVETV--ELPEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcC---CCceEEEEeeeeeee--cCCccccEEEe
Confidence 5689999999999999988886 567999999997 7899999887664 357899999998775 34589999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
....... . ..-....++.. ..+.|+|||+++-
T Consensus 156 E~~~~~l--~-~e~~l~~~l~a-~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGL--L-HESMLSSVLHA-RTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTB--T-TTCSHHHHHHH-HHHHEEEEEEEES
T ss_pred ecccccc--c-ccchhhhHHHH-HHhhCCCCceECC
Confidence 8764321 1 11123456666 5799999999873
No 118
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.34 E-value=1.9e-12 Score=112.10 Aligned_cols=105 Identities=14% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... .++++++.+|+.++. .+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v 93 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--LNDKYDIA 93 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--CSSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--cCCCeeEE
Confidence 4678999999999999999988643 479999999999999999987643 248999999998742 24689999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++...-... + ...++++. +++.|+|||.+++..
T Consensus 94 ~~~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 94 ICHAFLLHM--T----TPETMLQK-MIHSVKKGGKIICFE 126 (284)
T ss_dssp EEESCGGGC--S----SHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EECChhhcC--C----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 998653221 1 12578898 799999999998764
No 119
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=1.1e-12 Score=111.24 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=77.7
Q ss_pred CCCeEEEEecCchHHHHHHHhc----CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH--HhcCC-C
Q 025534 102 NPKTIFIMGGGEGSTAREILRH----KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRK-E 174 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~--l~~~~-~ 174 (251)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+.. .++++++++|+.+. +.... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---------CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999998875 3457999999999999888721 26899999999875 33223 3
Q ss_pred ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcc-cCCCCcEEEEec
Q 025534 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKP-RLNPEGIFVTQA 219 (251)
Q Consensus 175 ~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~-~L~pgG~l~~~~ 219 (251)
+||+|++|.... ...++++. +.+ +|+|||++++..
T Consensus 152 ~fD~I~~d~~~~---------~~~~~l~~-~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA---------NTFNIMKW-AVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS---------SHHHHHHH-HHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH---------hHHHHHHH-HHHhhCCCCCEEEEEe
Confidence 799999987521 12467888 686 999999999854
No 120
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.33 E-value=2.5e-12 Score=112.88 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=83.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|++||+++.+++.|++++...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELR---IDDHVRSRVCNMLDT-PFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhcC-CCCCCCEeEEE
Confidence 3568999999999999999988633 689999999999999999876543 245899999998763 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.. +-..++++. ++++|+|||++++..
T Consensus 191 ~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMY-------VDLHDLFSE-HSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGG-------SCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhh-------CCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 8743221 224688998 799999999988754
No 121
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.33 E-value=3.6e-12 Score=114.04 Aligned_cols=113 Identities=17% Similarity=0.108 Sum_probs=85.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++...+ . ++++++++|+.++.. ..+.||+|
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g---~-~~i~~~~~D~~~~~~-~~~~~D~I 276 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG---L-SWIRFLRADARHLPR-FFPEVDRI 276 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT---C-TTCEEEECCGGGGGG-TCCCCSEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC---C-CceEEEeCChhhCcc-ccCCCCEE
Confidence 456799999999999999998863 44689999999999999999987543 1 289999999988643 34569999
Q ss_pred EEcCCCCCCCCcccCC--ccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKL--YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l--~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++|+|..........+ .-.++++. ++++|+|||.+++.+
T Consensus 277 i~npPyg~r~~~~~~~~~~~~~~~~~-~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 277 LANPPHGLRLGRKEGLFHLYWDFLRG-ALALLPPGGRVALLT 317 (354)
T ss_dssp EECCCSCC----CHHHHHHHHHHHHH-HHHTSCTTCEEEEEE
T ss_pred EECCCCcCccCCcccHHHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 9999854321111111 11567888 799999999998865
No 122
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.33 E-value=1.4e-11 Score=108.76 Aligned_cols=115 Identities=16% Similarity=0.050 Sum_probs=85.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+.++.. ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-ccccCCEE
Confidence 456799999999999999998753 34689999999999999999986543 2479999999988643 35689999
Q ss_pred EEcCCCCCC----CCccc-CCc-----------cHHHHHHHHcccCCCCcEEEEecCC
Q 025534 180 IGDLADPIE----GGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~----~~p~~-~l~-----------~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
++|++.... ..|.. ..+ ..++++. +.+.|||||++++.+.+
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~-~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEK-GLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEeCC
Confidence 999873211 01100 001 1478888 78999999999886644
No 123
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.33 E-value=8.1e-12 Score=103.29 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=79.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 177 (251)
..+.+|||||||+|.++..+++. + .+|+++|+++.+++.+++. ++++++..|+.+.... ..++||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-G-IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 35689999999999999999987 3 5899999999999999986 3578889998887322 235699
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+|++...-+. .. ...+++. ++++|+|||.+++...
T Consensus 119 ~v~~~~~l~~-~~------~~~~l~~-~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALLH-QD------IIELLSA-MRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCCS-SC------CHHHHHH-HHHTEEEEEEEEEEEC
T ss_pred EEEECchhhh-hh------HHHHHHH-HHHHhCCCeEEEEEec
Confidence 9999764331 12 2478898 7999999999998654
No 124
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.33 E-value=2.1e-12 Score=108.41 Aligned_cols=106 Identities=17% Similarity=0.146 Sum_probs=81.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++...+ ...+++++.+|+.++. ..++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP-E-RFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR--PTELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT-T-EEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC--CSSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC--CCCCeeEEEE
Confidence 4569999999999999998773 3 689999999999999999876421 2357999999988753 3468999998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-... .+ -....+++. +++.|+|||.+++..
T Consensus 139 ~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAI-EP---EMRPAWAKS-MYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTS-CG---GGHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ChhhhcC-CH---HHHHHHHHH-HHHHCCCCcEEEEEE
Confidence 7543221 11 123578888 799999999998754
No 125
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.33 E-value=1.5e-12 Score=107.74 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=83.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.+++.+...+ .++++++.+|+.+.- ...++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENKIP-LPDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTBCS-SCSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEecccccCC-CCCCCeeEE
Confidence 456899999999999999998863 44699999999999999999876542 248999999987642 235789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++...-... + ....+++. +.+.|+|||.+++..
T Consensus 111 ~~~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 111 FMAFTFHEL--S----EPLKFLEE-LKRVAKPFAYLAIID 143 (219)
T ss_dssp EEESCGGGC--S----SHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eeehhhhhc--C----CHHHHHHH-HHHHhCCCeEEEEEE
Confidence 997543221 1 12578898 799999999988753
No 126
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.33 E-value=4.3e-12 Score=114.53 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=82.3
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~Ii 180 (251)
++++|||+| |+|.++..+++..+..+|++||+|+.+++.|++++..++ + .+++++.+|+.+.+.. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g--~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG--Y--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT--C--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C--CCEEEEEChhhhhchhhccCCccEEE
Confidence 468999999 999999999886443699999999999999999987553 1 2899999999885532 246899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCc-EEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEG-IFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG-~l~~~~ 219 (251)
+|++... . . ..++++. +.+.|+||| ++++..
T Consensus 247 ~~~p~~~----~-~--~~~~l~~-~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETL----E-A--IRAFVGR-GIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSH----H-H--HHHHHHH-HHHTBCSTTCEEEEEE
T ss_pred ECCCCch----H-H--HHHHHHH-HHHHcccCCeEEEEEE
Confidence 9986322 1 1 2688998 799999999 334443
No 127
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.33 E-value=4.9e-12 Score=103.59 Aligned_cols=100 Identities=8% Similarity=0.030 Sum_probs=79.9
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
+.+|||||||+|.++..+++. + .+|+++|+++.+++.+++.+ ++++++.+|+.++ ...+++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G-HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-SDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T-CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-GGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-ccCCCCeEEEEeh
Confidence 789999999999999999886 3 48999999999999999862 4789999998874 3345899999997
Q ss_pred CCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 183 ~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..-.. .+ .-....+++. ++++|+|||.+++..
T Consensus 110 ~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIH--MG--PGELPDALVA-LRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTT--CC--TTTHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred hhHhc--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 54222 11 0123578898 799999999998765
No 128
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.32 E-value=5e-12 Score=106.52 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~I 179 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.+++. ++++.+|+.+++.. .+++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE-G-IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH-T-CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC-C-CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 45689999999999999998886 3 4799999999999999863 78899999998743 45789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
++...-... .. -....+++. ++++|||||.+++...
T Consensus 106 ~~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEHL-DP---ERLFELLSL-CYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEESCGGGS-CG---GGHHHHHHH-HHHHBCTTCCEEEEEE
T ss_pred EECCchhhC-Cc---HHHHHHHHH-HHHHcCCCcEEEEEeC
Confidence 997542211 10 012578998 7999999999988763
No 129
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.32 E-value=3.9e-12 Score=108.50 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=78.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+ ++++++.+|+.++.. +++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~--~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRN---------PDAVLHHGDMRDFSL--GRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTCCC--SCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhC---------CCCEEEECChHHCCc--cCCcCEEE
Confidence 566899999999999999998863 58999999999999999863 378999999877432 57899999
Q ss_pred EcC-CCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~-~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+.. .-+....+ -....+++. ++++|+|||.+++.
T Consensus 116 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGHLAGQ---AELDAALER-FAAHVLPDGVVVVE 150 (263)
T ss_dssp ECTTGGGGSCHH---HHHHHHHHH-HHHTEEEEEEEEEC
T ss_pred EcCchhhhcCCH---HHHHHHHHH-HHHhcCCCcEEEEE
Confidence 974 21110000 012467888 79999999999985
No 130
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.32 E-value=2.9e-12 Score=108.81 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=82.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+... ++++++.+|+.+. ...+++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK-EFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC-CCCCCcEEEEe
Confidence 4567999999999999999988643 69999999999999999876421 6899999998764 33357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .+ -....+++. ++++|+|||.+++..
T Consensus 126 ~~~~l~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILAL-SL---ENKNKLFQK-CYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHHHHHhc-Ch---HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 97542221 10 123578888 799999999998764
No 131
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.32 E-value=2.4e-12 Score=114.71 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=83.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++.. ++ . ..+|+++|+|+.+++.|++++..++ ..++++++.+|+++++ ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~---l~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNK---LEHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECChHHhc----CCCcEEE
Confidence 4678999999999999999 77 3 5799999999999999999988764 2358999999999876 7899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
+|++.. ..++++. +.+.|+|||++++...++
T Consensus 264 ~dpP~~----------~~~~l~~-~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 264 MNLPKF----------AHKFIDK-ALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ECCTTT----------GGGGHHH-HHHHEEEEEEEEEEEEES
T ss_pred ECCcHh----------HHHHHHH-HHHHcCCCCEEEEEEeec
Confidence 997531 1267787 688999999988876443
No 132
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=9.3e-13 Score=115.27 Aligned_cols=110 Identities=17% Similarity=0.100 Sum_probs=82.9
Q ss_pred CCCCeEEEEecCchHHHHHHH-hcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREIL-RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|..+..++ ...+..+|+++|+++.+++.|++++...+ ...+++++.+|+.+.. . +++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-~-~~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA---LAGQITLHRQDAWKLD-T-REGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEECCGGGCC-C-CSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECchhcCC-c-cCCeEEE
Confidence 567899999999999999985 33345799999999999999999876432 2357999999988752 2 3889999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++........+ -...++++. +++.|+|||++++..
T Consensus 192 ~~~~~~~~~~~~---~~~~~~l~~-~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDD---ARVTELYRR-FWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 987542221011 112247898 799999999999865
No 133
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.32 E-value=4.9e-12 Score=114.36 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=82.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++++|||||||+|.++..+++. +..+|++||++ .+++.|++++..++ ..++++++.+|+.++. .+++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN---LDHIVEVIEGSVEDIS--LPEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT---CTTTEEEEESCGGGCC--CSSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC---CCCeEEEEECchhhcC--cCCcceEEE
Confidence 45689999999999999999987 44699999999 99999999887553 3467999999997763 237899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+++..... . ..-....+++. +.+.|+|||+++..
T Consensus 135 ~~~~~~~l-~--~e~~~~~~l~~-~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYFL-L--RESMFDSVISA-RDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTTB-T--TTCTHHHHHHH-HHHHEEEEEEEESS
T ss_pred EcChhhcc-c--chHHHHHHHHH-HHhhCCCCeEEEEe
Confidence 98743221 0 11123467887 68999999999753
No 134
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.32 E-value=8.1e-12 Score=105.59 Aligned_cols=106 Identities=9% Similarity=0.078 Sum_probs=85.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++ ...+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g---l~~~I~~~~gD~l~~~~~-~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG---LTSKIDVRLANGLSAFEE-ADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECchhhcccc-ccccCEEE
Confidence 56689999999999999999997656789999999999999999988664 346899999999887632 24799988
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+. +... -.-.+++.. ..+.|+++|.|+++.
T Consensus 96 ia-------GmGg-~lI~~IL~~-~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 96 IC-------GMGG-RLIADILNN-DIDKLQHVKTLVLQP 125 (230)
T ss_dssp EE-------EECH-HHHHHHHHH-TGGGGTTCCEEEEEE
T ss_pred Ee-------CCch-HHHHHHHHH-HHHHhCcCCEEEEEC
Confidence 74 2211 123577888 689999999999875
No 135
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.32 E-value=1.3e-12 Score=110.14 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=79.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++++...+ ..++++++++|+.++. ..++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYG---IADKIEFICGDFLLLA--SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHG--GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC---CCcCeEEEECChHHhc--ccCCCCEEEE
Confidence 57899999999999999999863 699999999999999999886542 1258999999999886 3478999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+++......+. ..+.. ++++|+|||.+++.
T Consensus 151 ~~~~~~~~~~~------~~~~~-~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYAT------AETFD-IRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGGG------SSSBC-TTTSCSSCHHHHHH
T ss_pred CCCcCCcchhh------hHHHH-HHhhcCCcceeHHH
Confidence 98743311111 12234 57889999986654
No 136
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.32 E-value=5.9e-12 Score=103.39 Aligned_cols=110 Identities=19% Similarity=0.208 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++... .+|+++|+++.+++.+++++.. .++++++.+|+.+. ...+++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL-DFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-CCCCCcccEEE
Confidence 5668999999999999999998743 4899999999999999988652 36899999998764 22357899999
Q ss_pred EcCCC---------CCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLAD---------PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~---------~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++.+- ++...+...-....+++. +.++|+|||++++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSE-VSRVLVPGGRFISMT 159 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHH-HHHhCcCCCEEEEEe
Confidence 86531 110000000012578888 799999999998875
No 137
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=3.9e-12 Score=109.93 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=82.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||+|||+|.++..+++. + .+|++||+++.+++.|++++..++ .+++++.+|+.+... .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G-YDVTSWDHNENSIAFLNETKEKEN-----LNISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHcC-----CceEEEEeccccccc--cCCccEEEE
Confidence 6789999999999999999987 4 499999999999999999887542 289999999877532 678999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+..-+.. .+ -....+++. ++++|+|||.+++.
T Consensus 191 ~~~~~~~-~~---~~~~~~l~~-~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 191 TVVFMFL-NR---ERVPSIIKN-MKEHTNVGGYNLIV 222 (286)
T ss_dssp CSSGGGS-CG---GGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred ccchhhC-CH---HHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8653221 11 123578898 79999999987654
No 138
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.31 E-value=1.8e-12 Score=109.29 Aligned_cols=107 Identities=22% Similarity=0.220 Sum_probs=81.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+ ..+++++.+|+.++. ...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT-PEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC-CCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC-CCCCCEEEEEE
Confidence 47899999999999999988764 4699999999999999999876431 247899999977643 23468999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+..-+. .+. -....+++. ++++|+|||++++..
T Consensus 153 ~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 153 QWVIGH--LTD--QHLAEFLRR-CKGSLRPNGIIVIKD 185 (241)
T ss_dssp ESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cchhhh--CCH--HHHHHHHHH-HHHhcCCCeEEEEEE
Confidence 854221 110 002368888 799999999998743
No 139
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.31 E-value=5.5e-13 Score=113.41 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=79.8
Q ss_pred CCCeEEEEecCchHHHHHHHhc--CCCcEEEEEECChHHHHHHHhchhcc---cCCCCCCC-------------------
Q 025534 102 NPKTIFIMGGGEGSTAREILRH--KTVEKVVMCDIDEEVVEFCKSYLVVN---KEAFSDPR------------------- 157 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~---~~~~~~~r------------------- 157 (251)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++... + ...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG---LTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH---HHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc---ccccchhhhhhhhhcccccchhh
Confidence 4679999999999999998875 33468999999999999999876432 1 0011
Q ss_pred ------eE-------------EEEcchHHHHhc----CCCceeEEEEcCCCCCCCCccc---CCccHHHHHHHHcccCCC
Q 025534 158 ------LE-------------LVINDARAELES----RKESYDVIIGDLADPIEGGPCY---KLYTKSFYEFVVKPRLNP 211 (251)
Q Consensus 158 ------v~-------------~~~~D~~~~l~~----~~~~fD~Ii~D~~~~~~~~p~~---~l~~~ef~~~~~~~~L~p 211 (251)
++ ++.+|+.+.... ..++||+|+++++......... .-....+++. +.++|+|
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~-~~~~Lkp 206 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS-LASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH-HHHHSCT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH-HHHhcCC
Confidence 56 999998875421 3358999999976321000000 0112478888 7999999
Q ss_pred CcEEEE
Q 025534 212 EGIFVT 217 (251)
Q Consensus 212 gG~l~~ 217 (251)
||++++
T Consensus 207 gG~l~~ 212 (250)
T 1o9g_A 207 HAVIAV 212 (250)
T ss_dssp TCEEEE
T ss_pred CcEEEE
Confidence 999987
No 140
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.31 E-value=2.8e-12 Score=111.29 Aligned_cols=107 Identities=16% Similarity=0.142 Sum_probs=83.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAG---LADNITVKYGSFLEI-PCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHT---CTTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEEcCcccC-CCCCCCEeEEE
Confidence 4568999999999999999988643 499999999999999999875432 246899999998763 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.. .+ ....+++. ++++|||||.+++..
T Consensus 156 ~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLH--SP----DKLKVFQE-CARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ecchhhh--cC----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 8754221 11 03578898 799999999988764
No 141
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.31 E-value=4.4e-12 Score=115.23 Aligned_cols=104 Identities=23% Similarity=0.199 Sum_probs=86.3
Q ss_pred CCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCC-eEEEEcchHHHHh-cCCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPR-LELVINDARAELE-SRKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~r-v~~~~~D~~~~l~-~~~~~fD~ 178 (251)
++.+|||++||+|.++.++++. .++.+|++||+|+..++.+++++..++ ...+ ++++.+|+++++. ...++||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng---l~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN---IPEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT---CCGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC---CCCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 4579999999999999998885 345789999999999999999998875 2345 9999999999997 65678999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|++|++. .+ .++++. +.+.|+|||++.+.+
T Consensus 129 V~lDP~g----~~------~~~l~~-a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPFG----TP------VPFIES-VALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCSS----CC------HHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEECCCc----CH------HHHHHH-HHHHhCCCCEEEEEe
Confidence 9999841 11 368887 688899999888754
No 142
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.31 E-value=7.7e-12 Score=109.77 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=82.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+...+ ..++++++.+|+.++ +++||+|+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v~ 160 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASID---TNRSRQVLLQGWEDF----AEPVDRIV 160 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECChHHC----CCCcCEEE
Confidence 4567999999999999999988633 599999999999999999876432 236799999998654 37899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-... .+ -...++++. +.++|+|||++++..
T Consensus 161 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEHF-GH---ENYDDFFKR-CFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGGT-CG---GGHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeChHHhc-CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 87532110 10 123578898 799999999998865
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.31 E-value=4.4e-12 Score=113.55 Aligned_cols=107 Identities=17% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++++|||||||+|.++..+++. +..+|++||+++ +++.|++++..++ ..++++++.+|+.+. ....++||+|++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK---LDHVVTIIKGKVEEV-ELPVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC-CCSSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC---CCCcEEEEECcHHHc-cCCCCceEEEEE
Confidence 5689999999999999999987 456999999995 9999999887553 346799999998876 223479999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+...... . ..-....+++. +.+.|+|||+++..
T Consensus 140 ~~~~~~l--~-~~~~~~~~l~~-~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYCL--F-YESMLNTVLHA-RDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBTB--T-BTCCHHHHHHH-HHHHEEEEEEEESC
T ss_pred ccccccc--c-CchhHHHHHHH-HHHhCCCCCEEccc
Confidence 8642211 0 11123467787 68999999998743
No 144
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.31 E-value=9.7e-12 Score=105.96 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=84.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++ ...+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~I~v~~gD~l~~~~~-~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG---LTEQIDVRKGNGLAVIEK-KDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEecchhhccCc-cccccEEE
Confidence 56689999999999999999987556789999999999999999987664 246899999999887632 23699998
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+. +... -.-.+++.. ..++|+++|.|+++.
T Consensus 96 ia-------gmGg-~lI~~IL~~-~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 96 IA-------GMGG-TLIRTILEE-GAAKLAGVTKLILQP 125 (244)
T ss_dssp EE-------EECH-HHHHHHHHH-TGGGGTTCCEEEEEE
T ss_pred Ee-------CCch-HHHHHHHHH-HHHHhCCCCEEEEEc
Confidence 74 2111 123577888 689999999999975
No 145
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.31 E-value=7.4e-12 Score=106.10 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=93.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~~fD 177 (251)
.++.+|||+|||+|.++..+++. .+..+|++||+++++++.+++... ..+++..+.+|+...-. ...+.+|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~------~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR------DRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST------TCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH------hhcCeeEEEEeccCccccccccceEE
Confidence 45689999999999999999986 445799999999999999988754 23689999999876432 2347899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCC--C-CCChHHHHHHHHHHHhh-CC
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG--I-FSHTEVFSCIYNTLRQV-FK 243 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~--~-~~~~~~~~~i~~~l~~~-F~ 243 (251)
+|++|.+.++ . ...++.. +++.|||||.+++-....+ . ......+++..+.|++. |.
T Consensus 150 vVf~d~~~~~--~------~~~~l~~-~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 150 GLYADVAQPE--Q------AAIVVRN-ARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp EEEECCCCTT--H------HHHHHHH-HHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCC
T ss_pred EEEEeccCCh--h------HHHHHHH-HHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCE
Confidence 9999977553 1 2467888 7999999999886421100 0 01234567777777765 54
No 146
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.31 E-value=3.7e-12 Score=107.05 Aligned_cols=104 Identities=19% Similarity=0.152 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH--hcCCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--ESRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l--~~~~~~fD 177 (251)
.+..+|||+|||+|.++..+++.. +..+|++||+++.+++.+.+....+ ++++++.+|+.+.. ....++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcEE
Confidence 346799999999999999999862 3469999999999877776655432 57999999998742 22357899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++|.+.+. ....+++. +.+.|+|||++++..
T Consensus 150 ~V~~~~~~~~--------~~~~~~~~-~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVAQPD--------QTRIVALN-AHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEEcCCCcc--------HHHHHHHH-HHHHcCCCeEEEEEE
Confidence 9999876321 12356777 689999999998854
No 147
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.30 E-value=4e-12 Score=115.04 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=85.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhccc----CCCCCCCeEEEEcchHHHH-----h
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNK----EAFSDPRLELVINDARAEL-----E 170 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~----~~~~~~rv~~~~~D~~~~l-----~ 170 (251)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.... +.+..++++++.+|+.+.. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999998862 34699999999999999999875321 0023478999999988752 2
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 171 ~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..+++||+|+++..-+.. + ....+++. ++++|||||.+++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~--~----d~~~~l~~-~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS--T----NKLALFKE-IHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcC--C----CHHHHHHH-HHHHcCCCCEEEEEE
Confidence 234789999998653321 1 12578898 799999999998753
No 148
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=1.4e-12 Score=110.96 Aligned_cols=81 Identities=10% Similarity=0.086 Sum_probs=63.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH-HHhcC----CCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESR----KESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~-~l~~~----~~~f 176 (251)
++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++..++ ..++++++++|+.+ +.... +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN---LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC---CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 4679999999999999888875333699999999999999999987543 23579999999765 22211 2589
Q ss_pred eEEEEcCCC
Q 025534 177 DVIIGDLAD 185 (251)
Q Consensus 177 D~Ii~D~~~ 185 (251)
|+|++|+|.
T Consensus 142 D~i~~npp~ 150 (254)
T 2h00_A 142 DFCMCNPPF 150 (254)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999999864
No 149
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.29 E-value=8.6e-12 Score=104.64 Aligned_cols=102 Identities=18% Similarity=0.194 Sum_probs=81.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.+++.. ..++++++.+|+.+. ...+++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~-~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT-G-YKAVGVDISEVMIQKGKERG-------EGPDLSFIKGDLSSL-PFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHTTT-------CBTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHhhc-------ccCCceEEEcchhcC-CCCCCCccEEE
Confidence 46789999999999999999987 3 58999999999999999874 236899999998764 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.... ...+++. ++++|+|||.+++..
T Consensus 122 ~~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEWTEE------PLRALNE-IKRVLKSDGYACIAI 153 (242)
T ss_dssp EESCTTSSSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChHhhccC------HHHHHHH-HHHHhCCCeEEEEEE
Confidence 8754322111 2478888 799999999998865
No 150
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.29 E-value=7e-12 Score=105.12 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=81.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++. +..+++++|+++.+++.+++.+. .++++++.+|+.+.. ...++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~-~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKLH-LPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGCC-CCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhcc-CCCCCceEEE
Confidence 35689999999999999999886 33499999999999999998753 247999999987742 2357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+. .+ ....+++. ++++|+|||.+++..
T Consensus 113 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHY--VE----DVARLFRT-VHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eeccccc--cc----hHHHHHHH-HHHhcCcCcEEEEEe
Confidence 8754222 11 13578888 799999999998754
No 151
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=1.1e-11 Score=106.74 Aligned_cols=100 Identities=19% Similarity=0.271 Sum_probs=79.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++ ++ .+|+++|+++.+++.+++.+ ++++++.+|+.++ . .+++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~-~~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SG-AEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-R-VDKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-C-CSSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CC-CeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-C-cCCCcCEEE
Confidence 4568999999999999999988 33 69999999999999999863 4788999998774 2 257899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+...-++... ...+++. ++++|+|||.+++...
T Consensus 123 ~~~~l~~~~d------~~~~l~~-~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 123 SNAMLHWVKE------PEAAIAS-IHQALKSGGRFVAEFG 155 (279)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred EcchhhhCcC------HHHHHHH-HHHhcCCCcEEEEEec
Confidence 9764322111 2478888 7999999999988653
No 152
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=3.5e-12 Score=106.77 Aligned_cols=92 Identities=16% Similarity=0.323 Sum_probs=75.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~I 179 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.++++ .++++++++|+.+.+... +++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-A-ARWAAYDFSPELLKLARAN---------APHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-S-SEEEEEESCHHHHHHHHHH---------CTTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHh---------CCCceEEEcchhhccCCcCCCCEEEE
Confidence 46789999999999999999987 3 5999999999999999987 257999999986555434 5789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEE
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~ 216 (251)
++.. .+. .+++. ++++|+|||+++
T Consensus 116 ~~~~------~~~------~~l~~-~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSRR------GPT------SVILR-LPELAAPDAHFL 139 (226)
T ss_dssp EEES------CCS------GGGGG-HHHHEEEEEEEE
T ss_pred EeCC------CHH------HHHHH-HHHHcCCCcEEE
Confidence 9982 121 34566 689999999998
No 153
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.29 E-value=1.5e-11 Score=105.25 Aligned_cols=118 Identities=15% Similarity=0.155 Sum_probs=89.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++.. . +|+++|+|+.+++.|++++..++ .. ++++.+|+.+.+. .++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~~~~~----~~-v~~~~~d~~~~~~--~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANAKRNG----VR-PRFLEGSLEAALP--FGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHHHHTT----CC-CEEEESCHHHHGG--GCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChhhcCc--CCCCCEEE
Confidence 457899999999999999988863 3 99999999999999999987653 12 8999999988653 46899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh-CC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FK 243 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~-F~ 243 (251)
++...+ . ..++++. +.++|+|||.+++.... ......+.+.+++. |.
T Consensus 190 ~n~~~~-------~--~~~~l~~-~~~~LkpgG~lils~~~------~~~~~~v~~~l~~~Gf~ 237 (254)
T 2nxc_A 190 ANLYAE-------L--HAALAPR-YREALVPGGRALLTGIL------KDRAPLVREAMAGAGFR 237 (254)
T ss_dssp EECCHH-------H--HHHHHHH-HHHHEEEEEEEEEEEEE------GGGHHHHHHHHHHTTCE
T ss_pred ECCcHH-------H--HHHHHHH-HHHHcCCCCEEEEEeec------cCCHHHHHHHHHHCCCE
Confidence 985421 1 2478888 79999999999885421 12244556666655 44
No 154
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.29 E-value=3.7e-12 Score=110.92 Aligned_cols=110 Identities=16% Similarity=0.200 Sum_probs=81.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.+.+|||||||+|.++..+++. + .+|++||+++.+++.|++++...+.. ...+++++.+|+.++- .+++||+|+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~~~~--~~~~fD~v~ 155 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLAAFRKRLAEAPAD-VRDRCTLVQGDMSAFA--LDKRFGTVV 155 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT-T-CCEEEEESCHHHHHHHHHHHHTSCHH-HHTTEEEEECBTTBCC--CSCCEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHHHHhhcccc-cccceEEEeCchhcCC--cCCCcCEEE
Confidence 44569999999999999999986 3 58999999999999999987632100 0158999999988742 257899998
Q ss_pred EcCC-CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~-~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+... .+.. .+ -....+++. ++++|+|||++++...
T Consensus 156 ~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 156 ISSGSINEL-DE---ADRRGLYAS-VREHLEPGGKFLLSLA 191 (299)
T ss_dssp ECHHHHTTS-CH---HHHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred ECCcccccC-CH---HHHHHHHHH-HHHHcCCCcEEEEEee
Confidence 6421 1110 11 012578888 7999999999998763
No 155
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.29 E-value=4.7e-12 Score=100.81 Aligned_cols=97 Identities=18% Similarity=0.084 Sum_probs=77.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++ .++++++.+| +....++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---------FDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---------CTTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC----CCCCCCceEEEE
Confidence 456799999999999999999864 3999999999999999986 2589999999 333457899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-... + ....+++. +++.|+|||.+++..
T Consensus 81 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 81 FANSFHDM--D----DKQHVISE-VKRILKDDGRVIIID 112 (170)
T ss_dssp EESCSTTC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eccchhcc--c----CHHHHHHH-HHHhcCCCCEEEEEE
Confidence 88653321 1 13578888 799999999998753
No 156
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.29 E-value=1e-11 Score=112.51 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=85.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccC-------------CCCCCCeEEEEcchHHH
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE-------------AFSDPRLELVINDARAE 168 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-------------~~~~~rv~~~~~D~~~~ 168 (251)
++.+|||+|||+|..+..+++..+..+|+++|+|+.+++.+++++..+.. .+ .+++++++|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 57899999999999999998864446899999999999999999886610 11 2399999999999
Q ss_pred HhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 169 LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 169 l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+....++||+|++|++. . ..+|++. +.+.|++||++.+.+
T Consensus 125 ~~~~~~~fD~I~lDP~~----~------~~~~l~~-a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAERHRYFHFIDLDPFG----S------PMEFLDT-ALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHSTTCEEEEEECCSS----C------CHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCCCC----C------HHHHHHH-HHHhcCCCCEEEEEe
Confidence 86555689999999752 1 1478888 688999999887753
No 157
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.29 E-value=5.8e-12 Score=106.88 Aligned_cols=104 Identities=19% Similarity=0.204 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++. + .+|+++|+++.+++.+++++. . ..++++++.+|+.+. ...+++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~~~~d~~~~-~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-G-YRYIALDADAAMLEVFRQKIA-G----VDRKVQVVQADARAI-PLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-T-CEEEEEESCHHHHHHHHHHTT-T----SCTTEEEEESCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHhh-c----cCCceEEEEcccccC-CCCCCCeeEEE
Confidence 45689999999999999999886 3 689999999999999999872 1 247899999998653 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-++. + ....+++. ++++|+|||.+++..
T Consensus 110 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 110 VVHLWHLV--P----DWPKVLAE-AIRVLKPGGALLEGW 141 (263)
T ss_dssp EESCGGGC--T----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhhc--C----CHHHHHHH-HHHHCCCCcEEEEEe
Confidence 97543321 1 13578888 799999999988763
No 158
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.29 E-value=6.4e-12 Score=103.13 Aligned_cols=107 Identities=17% Similarity=0.108 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||+|||+|..+..++...+ .+|+++|+++.+++.|++++... .++++++.+|+.+. ...+++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIRKL-PFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchhhC-CCCCCceeEEE
Confidence 4568999999999997444444344 59999999999999999987643 25789999998763 22357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .+ -....+++. ++++|+|||++++..
T Consensus 95 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHM-RK---NDVKEAIDE-IKRVLKPGGLACINF 128 (209)
T ss_dssp ECSCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChHHhC-CH---HHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 86431110 00 113578888 799999999998765
No 159
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.28 E-value=2.3e-11 Score=112.51 Aligned_cols=116 Identities=9% Similarity=0.033 Sum_probs=87.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||+|||+|+.+..+++. .+..+|+++|+|+..++.+++++...+ -.+++++.+|+.++....+++||+|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhccccCCEE
Confidence 45689999999999999988875 334699999999999999999987553 2479999999998764445789999
Q ss_pred EEcCCCCCC----CCcc-------cC-----CccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 180 IGDLADPIE----GGPC-------YK-----LYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~----~~p~-------~~-----l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
++|+|.... ..|. .. -...++++. +.+.|||||+++..+++
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSS-AIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHH-HHHTEEEEEEEEEEESC
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEEee
Confidence 999974211 0110 00 012367887 68999999999877654
No 160
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=1.8e-12 Score=109.22 Aligned_cols=111 Identities=13% Similarity=-0.026 Sum_probs=78.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECC-hHHHHHH---HhchhcccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDID-EEVVEFC---KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 176 (251)
.++.+|||||||+|.++..+++..+..+|++||++ +.|++.| +++.... ..++++++.+|+.++-....+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhccCeE
Confidence 45678999999999999999865445789999999 7777776 7765433 23579999999887622123668
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
|.|.++.+.+.. .........+++++ ++++|||||.+++
T Consensus 99 ~~i~~~~~~~~~-~~~~~~~~~~~l~~-~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTL-LEYVIKPNRDILSN-VADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHH-HHHHHTTCHHHHHH-HHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHH-hhhhhcchHHHHHH-HHHhcCCCcEEEE
Confidence 888877542210 00001123578898 7999999999988
No 161
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=3.5e-12 Score=110.20 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=83.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++...+ ...+++++.+|+.+.-...+++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK---RRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC---CSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC---CCccEEEEECCccccccCCCCCcCEEE
Confidence 567899999999999988888764 4599999999999999999876432 235799999998765211357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+..... .-...++++. ++++|+|||.+++..
T Consensus 139 ~~~~l~~~~~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 139 SQFSFHYAFST--SESLDIAQRN-IARHLRPGGYFIMTV 174 (298)
T ss_dssp EESCGGGGGSS--HHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhhhcCC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 98542210000 0112578888 799999999998765
No 162
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.28 E-value=8.5e-12 Score=110.05 Aligned_cols=103 Identities=18% Similarity=0.170 Sum_probs=80.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++..+ ..+|+++|+++++++.|++++...+ .++++++.+|+.+.+. ..++||+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g----~~~v~~~~~d~~~~~~-~~~~fD~I 148 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG----IENVIFVCGDGYYGVP-EFSPYDVI 148 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEECChhhccc-cCCCeEEE
Confidence 4568999999999999999988643 3579999999999999999886542 2469999999987543 24689999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
+++...+. +. +. +.+.|||||++++...+
T Consensus 149 v~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 149 FVTVGVDE-------VP-----ET-WFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EECSBBSC-------CC-----HH-HHHHEEEEEEEEEEBCB
T ss_pred EEcCCHHH-------HH-----HH-HHHhcCCCcEEEEEECC
Confidence 99965332 11 35 57899999999987643
No 163
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.28 E-value=7.5e-12 Score=105.74 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=81.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++.. .++++++.+|+.+. ....++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG------MPVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT------SSEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc------CCceEEEEccHHHC-CCCCCCeEEEE
Confidence 356899999999999999988764 46899999999999999998652 25799999998764 23357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+. -+. -....+++. ++++|+|||++++..
T Consensus 164 ~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIY--LTD--ADFVKFFKH-CQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhh--CCH--HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 8754211 110 012578888 799999999988754
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.28 E-value=3e-12 Score=114.23 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=83.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
.+.+|||+|||+|.++..+++..+..+|+++|+|+.+++.+++++..++ .+++++.+|+.++. .++||+|++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~~~~~~d~~~~~---~~~fD~Iv~ 267 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG-----VEGEVFASNVFSEV---KGRFDMIIS 267 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTC---CSCEEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-----CCCEEEEccccccc---cCCeeEEEE
Confidence 4579999999999999999887544599999999999999999887542 34688999987653 568999999
Q ss_pred cCCCCCCCCcc-cCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 182 DLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 182 D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+++.+. +.. ..-...++++. ++++|+|||.+++...
T Consensus 268 ~~~~~~--g~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 268 NPPFHD--GMQTSLDAAQTLIRG-AVRHLNSGGELRIVAN 304 (343)
T ss_dssp CCCCCS--SSHHHHHHHHHHHHH-HGGGEEEEEEEEEEEE
T ss_pred CCCccc--CccCCHHHHHHHHHH-HHHhCCCCcEEEEEEc
Confidence 986443 110 00113578898 7999999999987653
No 165
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.28 E-value=1.4e-11 Score=109.88 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=80.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++..++ ..++++++.+|+.++ ....++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK---LEDTITLIKGKIEEV-HLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC---CCCcEEEEEeeHHHh-cCCCCcEEEEE
Confidence 45689999999999999999987 446999999997 9999999876543 236899999998875 22347899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~ 216 (251)
++...... . .......++.. +++.|+|||+++
T Consensus 137 s~~~~~~l-~--~~~~~~~~l~~-~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYFL-L--FESMLDSVLYA-KNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTTB-T--TTCHHHHHHHH-HHHHEEEEEEEE
T ss_pred EcCchhhc-c--CHHHHHHHHHH-HHhhcCCCcEEE
Confidence 98631110 0 01112467787 689999999987
No 166
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.28 E-value=1e-11 Score=104.08 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+++++|+++.+++.+++++...+ .+++++.+|+.++. ..++||+|+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~--~~~~fD~v~ 106 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-F-KNTWAVDLSQEMLSEAENKFRSQG-----LKPRLACQDISNLN--INRKFDLIT 106 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-S-SEEEEECSCHHHHHHHHHHHHHTT-----CCCEEECCCGGGCC--CSCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-C-CcEEEEECCHHHHHHHHHHHhhcC-----CCeEEEecccccCC--ccCCceEEE
Confidence 36789999999999999999886 3 589999999999999999876432 37999999987752 237899999
Q ss_pred EcC-CCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~-~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.. .-+....+ -...++++. ++++|+|||++++..
T Consensus 107 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 107 CCLDSTNYIIDS---DDLKKYFKA-VSNHLKEGGVFIFDI 142 (246)
T ss_dssp ECTTGGGGCCSH---HHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EcCccccccCCH---HHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 974 32110010 113578888 799999999999854
No 167
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.27 E-value=2.6e-11 Score=97.38 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=73.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. +++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~--~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN--QESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC--GGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc--cCCCCEEE
Confidence 356799999999999999998863 99999999999987 1468999999987442 37899999
Q ss_pred EcCCCCCCCCcc---cCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPC---YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~---~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++++......+. ......++++. +.+.| |||.+++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDR-FVDAV-TVGMLYLLV 123 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHH-HHHHC-CSSEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHH-HHhhC-CCCEEEEEE
Confidence 998643211110 00112357777 56677 999998754
No 168
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.27 E-value=6.6e-12 Score=108.64 Aligned_cols=114 Identities=8% Similarity=0.076 Sum_probs=81.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCCceeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~~fD~I 179 (251)
++.+|||||||+|..+..+++. + .+|+++|+|+.+++.|+++..........+++.+..+|+.+... ...++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE-G-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 5689999999999999999986 3 49999999999999999875321100012578999999887642 235789999
Q ss_pred EEc--CCCCCCCCc-ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGD--LADPIEGGP-CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D--~~~~~~~~p-~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++. ...+.. .+ ...-....+++. ++++|+|||++++..
T Consensus 135 ~~~g~~l~~~~-~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 135 ICLGNSFAHLP-DSKGDQSEHRLALKN-IASMVRPGGLLVIDH 175 (293)
T ss_dssp EECTTCGGGSC-CSSSSSHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEcChHHhhcC-ccccCHHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 995 332221 10 000113578898 799999999998764
No 169
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.27 E-value=1.5e-11 Score=102.34 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=82.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccC-CCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.+++++...+. .....+++++.+|+... ....++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-G-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCceeEE
Confidence 46789999999999999999987 3 5999999999999999998754321 01124789999998764 2335789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++...-.....+ .....+++. ++++|+|||.+++..
T Consensus 106 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDP---KERSRIIKE-VFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCH---HHHHHHHHH-HHHHcCCCeEEEEEE
Confidence 997542211011 111268888 799999999998764
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.27 E-value=2e-11 Score=103.46 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=81.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~~fD 177 (251)
.++.+|||+|||+|..+..+++. .+..+|++||+++.+++...+.... .++++++.+|++.... ...++||
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccceE
Confidence 35689999999999999988875 3346999999999886544332211 2579999999875321 1246899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCC---CCCChHHHHHHHHHHHh
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQ 240 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~---~~~~~~~~~~i~~~l~~ 240 (251)
+|++|.+.+. ...-+... +++.|||||.+++..-+++ .....+.+....+.|++
T Consensus 149 ~I~~d~a~~~--------~~~il~~~-~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~ 205 (232)
T 3id6_C 149 VLYVDIAQPD--------QTDIAIYN-AKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLEN 205 (232)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHH
T ss_pred EEEecCCChh--------HHHHHHHH-HHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHH
Confidence 9999976432 11223344 4669999999987643222 11122334556666665
No 171
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.26 E-value=1.9e-10 Score=94.35 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++..++ .+++++.+|+.++ +++||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~----~~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-----GKFKVFIGDVSEF----NSRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-----TSEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCEEEEECchHHc----CCCCCEEE
Confidence 35689999999999999999886 34589999999999999999887542 2799999998874 35899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|++..... .-....+++. +.+.| |+++++.
T Consensus 118 ~~~p~~~~~----~~~~~~~l~~-~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQR----KHADRPFLLK-AFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSS----TTTTHHHHHH-HHHHC--SEEEEEE
T ss_pred EcCCCcccc----CCchHHHHHH-HHHhc--CcEEEEE
Confidence 998743311 1224577887 67777 6666554
No 172
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.26 E-value=1.1e-11 Score=101.31 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=78.8
Q ss_pred eEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025534 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (251)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~ 184 (251)
+|||||||+|..+..+++. + .+|+++|+++.+++.|++++...+ .+++++.+|+.+. ....++||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-G-YEVTAVDQSSVGLAKAKQLAQEKG-----VKITTVQSNLADF-DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHT-----CCEEEECCBTTTB-SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcC-----CceEEEEcChhhc-CCCcCCccEEEEEhh
Confidence 9999999999999999886 3 599999999999999999876432 3799999998764 223478999998532
Q ss_pred CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 185 ~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+. .+ -...++++. +++.|+|||.+++..
T Consensus 104 -~~--~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 -HL--PS---SLRQQLYPK-VYQGLKPGGVFILEG 131 (202)
T ss_dssp -CC--CH---HHHHHHHHH-HHTTCCSSEEEEEEE
T ss_pred -cC--CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 21 11 113578888 799999999998865
No 173
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=2.7e-11 Score=108.36 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=80.2
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+..++ ..++++++.+|+.+. ..+++||+|++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~---l~~~v~~~~~d~~~~--~~~~~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEV--SLPEQVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC---CCCcEEEEEcchhhC--CCCCceeEEEE
Confidence 5689999999999999999886 456999999997 7899998876543 236899999998764 22468999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+........ -...+.+.. +++.|+|||++++.
T Consensus 123 ~~~~~~~~~----~~~~~~l~~-~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 123 EPMGYMLFN----ERMLESYLH-AKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCBTTBTT----TSHHHHHHH-GGGGEEEEEEEESC
T ss_pred eCchhcCCh----HHHHHHHHH-HHhhcCCCeEEEEe
Confidence 865221001 112467777 69999999999854
No 174
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.25 E-value=1.9e-11 Score=105.03 Aligned_cols=114 Identities=12% Similarity=0.150 Sum_probs=82.0
Q ss_pred CCCeEEEEecCchHHHHHHHhc-------CC-----CcEEEEEECCh---HHHH-----------HHHhchhc-cc----
Q 025534 102 NPKTIFIMGGGEGSTAREILRH-------KT-----VEKVVMCDIDE---EVVE-----------FCKSYLVV-NK---- 150 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~-------~~-----~~~v~~VEid~---~vi~-----------~a~~~~~~-~~---- 150 (251)
++.+||+||+|+|..+..+++. .+ ..+++++|.+| +.+. .|++.+.. +.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4578999999999987765542 22 24899999987 3333 45554321 00
Q ss_pred ---CCCCC--CCeEEEEcchHHHHhcCCC----ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 151 ---EAFSD--PRLELVINDARAELESRKE----SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 151 ---~~~~~--~rv~~~~~D~~~~l~~~~~----~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..+.+ .+++++.+|+++.+..... .||+|++|++.|.. .| .+++.++++. +.++|+|||++++.+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~p--~lw~~~~l~~-l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-NP--DMWTQNLFNA-MARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-CG--GGCCHHHHHH-HHHHEEEEEEEEESC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-Ch--hhcCHHHHHH-HHHHcCCCcEEEEEe
Confidence 00122 4678999999999876543 79999999986652 33 6889999999 899999999999754
No 175
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.25 E-value=8.7e-12 Score=104.55 Aligned_cols=104 Identities=18% Similarity=0.209 Sum_probs=80.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++..+|||+|||+|.++..+++. .+++++|+++.+++.|++++... .++++++.+|+.+.. ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 101 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--LPEPVDAIT 101 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--CSSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--CCCCcCEEE
Confidence 34589999999999999998875 58999999999999999987643 257999999987752 237899999
Q ss_pred EcC--CCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDL--ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~--~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.. ..+.. .+ -....+++. ++++|+|||++++..
T Consensus 102 ~~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 102 ILCDSLNYLQ-TE---ADVKQTFDS-AARLLTDGGKLLFDV 137 (243)
T ss_dssp ECTTGGGGCC-SH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCchhhcC-CH---HHHHHHHHH-HHHhcCCCeEEEEEc
Confidence 864 21110 00 112467888 799999999999854
No 176
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.25 E-value=1.4e-11 Score=108.15 Aligned_cols=113 Identities=10% Similarity=0.091 Sum_probs=75.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCC--CCCeEEEEcch------HHHHh-cC
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS--DPRLELVINDA------RAELE-SR 172 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~--~~rv~~~~~D~------~~~l~-~~ 172 (251)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|+++....+.... ..+++++++|. .+... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4689999999999866555554 346899999999999999998653210000 01366777776 32221 13
Q ss_pred CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.++||+|++...-+....+ .+ ...+++. ++++|||||++++.+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~-~~--~~~~l~~-~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHP-RH--YATVMNN-LSELTASGGKVLITT 169 (302)
T ss_dssp SSCEEEEEEESCGGGTCST-TT--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCH-HH--HHHHHHH-HHHHcCCCCEEEEEe
Confidence 4789999986532211011 12 2588999 799999999998764
No 177
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=2.1e-11 Score=100.74 Aligned_cols=103 Identities=19% Similarity=0.160 Sum_probs=79.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++.. +..+|+++|+++.+++.+++++...+ .++++++.+|+...+. ..++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~-~~~~fD~v 150 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGTLGYE-PLAPYDRI 150 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcccCCC-CCCCeeEE
Confidence 456799999999999999998864 23699999999999999999876432 2469999999865432 24689999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
+++...+. +. +. +.+.|+|||++++...+
T Consensus 151 ~~~~~~~~-------~~-----~~-~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 151 YTTAAGPK-------IP-----EP-LIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EESSBBSS-------CC-----HH-HHHTEEEEEEEEEEESS
T ss_pred EECCchHH-------HH-----HH-HHHHcCCCcEEEEEECC
Confidence 99865322 11 35 68899999999987643
No 178
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=1.2e-11 Score=104.51 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=80.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|..+..+++. + .+|+++|+++.+++.|++++... ..+++++.+|+.+.. ..++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-G-YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--FKNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--CCSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--cCCCccEEE
Confidence 35689999999999999999886 3 58999999999999999987643 247999999988742 246899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.........+ -....+++. ++++|+|||++++..
T Consensus 111 ~~~~~~~~~~~---~~~~~~l~~-~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIMYFDE---EDLRKLFSK-VAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGGGSCH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCCchhcCCH---HHHHHHHHH-HHHHcCCCeEEEEec
Confidence 85321100010 112468888 799999999998754
No 179
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=1.1e-11 Score=104.56 Aligned_cols=105 Identities=9% Similarity=0.019 Sum_probs=80.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC----CCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----~~~f 176 (251)
.++.+|||||||+|..+..+++... +|++||+|+.+++.|++++. ..+++++.+|+.+.-... ...|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4567899999999999999998743 89999999999999998762 248999999987753221 1349
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|++....+.. .+ -....+++. ++++|+|||.+++..
T Consensus 126 d~v~~~~~~~~~-~~---~~~~~~l~~-~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHI-PV---EKRELLGQS-LRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTS-CG---GGHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcC-CH---HHHHHHHHH-HHHHcCCCCEEEEEe
Confidence 999998654331 11 123578898 799999999866543
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.25 E-value=1.2e-11 Score=103.54 Aligned_cols=108 Identities=20% Similarity=0.262 Sum_probs=80.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC------cEEEEEECChHHHHHHHhchhcccC-CCCCCCeEEEEcchHHHHhcCC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV------EKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~------~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~ 173 (251)
.+..+|||||||+|..+..+++..+. .+|+++|+++.+++.|++++...+. .+..++++++.+|+.+.+.. .
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-N 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-G
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-C
Confidence 34579999999999999988875331 4899999999999999998753210 00025799999999874322 3
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
++||+|+++...+. + .+. +.+.|+|||++++..+++
T Consensus 162 ~~fD~I~~~~~~~~-------~-----~~~-~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 162 APYNAIHVGAAAPD-------T-----PTE-LINQLASGGRLIVPVGPD 197 (227)
T ss_dssp CSEEEEEECSCBSS-------C-----CHH-HHHTEEEEEEEEEEESCS
T ss_pred CCccEEEECCchHH-------H-----HHH-HHHHhcCCCEEEEEEecC
Confidence 68999999865322 1 145 678999999999987654
No 181
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.25 E-value=8.9e-12 Score=102.75 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.+++.+ +++++.+|+.+.- ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA-G-FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC--CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc-C-CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC--CCCcEEEEE
Confidence 45689999999999999999986 3 59999999999999999875 3567788876643 468999999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.. .+. -....+++. ++++|+|||++++..
T Consensus 108 ~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 108 AHACLLH--VPR--DELADVLKL-IWRALKPGGLFYASY 141 (211)
T ss_dssp ECSCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ecCchhh--cCH--HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9754221 110 012468888 799999999998865
No 182
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=2.5e-11 Score=107.63 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=80.2
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++++|||||||+|.++..+++. +..+|++||++ .+++.|++.+..++ ..++++++.+|+.+. ....++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG---FSDKITLLRGKLEDV-HLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC---CCCCEEEEECchhhc-cCCCCcccEEEE
Confidence 5689999999999999999886 45699999999 58999999876543 246899999998775 223478999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+...... . ..-....++.. +++.|+|||+++.
T Consensus 112 ~~~~~~l--~-~~~~~~~~l~~-~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFL--L-YESMMDTVLYA-RDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTB--S-TTCCHHHHHHH-HHHHEEEEEEEES
T ss_pred eCchhhc--c-cHHHHHHHHHH-HHhhcCCCeEEEE
Confidence 8653211 0 01112467777 6899999999973
No 183
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.24 E-value=6.1e-11 Score=110.45 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=87.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+.++.....++||+|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhccccCCEEE
Confidence 56899999999999999998863 33689999999999999999987543 24799999999887543457899999
Q ss_pred EcCCCCCC----CCccc-CCc-----------cHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 181 GDLADPIE----GGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 181 ~D~~~~~~----~~p~~-~l~-----------~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
+|+|.... ..|.. ..+ ..++++. +.+.|||||+++..+++.
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDS-AFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESCC
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHH-HHHhcCCCCEEEEecccC
Confidence 99874211 01110 111 2467777 689999999999876543
No 184
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.24 E-value=3.1e-11 Score=100.79 Aligned_cols=98 Identities=21% Similarity=0.347 Sum_probs=77.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++... .+++++.+|+.+.+. ..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~-~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE-EEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc-cCCCccEEE
Confidence 456799999999999999998874 69999999999999999987643 279999999877332 246899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
++...+. +. .. +.+.|+|||++++...
T Consensus 140 ~~~~~~~-------~~-----~~-~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 140 VWATAPT-------LL-----CK-PYEQLKEGGIMILPIG 166 (231)
T ss_dssp ESSBBSS-------CC-----HH-HHHTEEEEEEEEEEEC
T ss_pred ECCcHHH-------HH-----HH-HHHHcCCCcEEEEEEc
Confidence 9864322 11 24 5789999999988764
No 185
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.24 E-value=1.8e-11 Score=100.48 Aligned_cols=124 Identities=14% Similarity=0.136 Sum_probs=85.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH-----hc-C--
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-----ES-R-- 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l-----~~-~-- 172 (251)
.++.+|||||||+|..+..+++. ..+|++||+++.. ..++++++.+|+.+.- .. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 45689999999999999999887 3699999999741 1357999999976421 10 0
Q ss_pred --CCceeEEEEcCCCCCCCCcc-cCC----ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCce
Q 025534 173 --KESYDVIIGDLADPIEGGPC-YKL----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (251)
Q Consensus 173 --~~~fD~Ii~D~~~~~~~~p~-~~l----~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (251)
.++||+|++|.+........ ... .....++. +.++|+|||.|++... . .+....+...|+..|..|
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~-a~~~LkpGG~lv~k~~-----~-~~~~~~~~~~l~~~F~~v 159 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEI-AVRYLRNGGNVLLKQF-----Q-GDMTNDFIAIWRKNFSSY 159 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEE-----C-STHHHHHHHHHGGGEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEc-----C-CCCHHHHHHHHHHhcCEE
Confidence 14899999997532211100 000 01345666 5899999999998652 1 223567788888889887
Q ss_pred eee
Q 025534 246 YNL 248 (251)
Q Consensus 246 ~~~ 248 (251)
..+
T Consensus 160 ~~~ 162 (191)
T 3dou_A 160 KIS 162 (191)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 186
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.23 E-value=2.9e-11 Score=99.55 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|..+..+ +..+++++|+++.+++.+++++ ++++++.+|+.+. ...+++||+|+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 100 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL-PFPGESFDVVL 100 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC-CCCCCcEEEEE
Confidence 36789999999999998876 3248999999999999999874 4688999998663 22356899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. + ...++++. ++++|+|||.+++..
T Consensus 101 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 101 LFTTLEFV--E----DVERVLLE-ARRVLRPGGALVVGV 132 (211)
T ss_dssp EESCTTTC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChhhhc--C----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 97543221 1 12578888 799999999998865
No 187
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=5.9e-11 Score=97.14 Aligned_cols=96 Identities=19% Similarity=0.161 Sum_probs=72.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. +..+|++||+|+.+++.|++++. +++++.+|+.++ +++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----SGKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----CCCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----CCCeeEEE
Confidence 45689999999999999999886 45689999999999999998753 689999998873 36899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+|++.+.. + .-...++++. +.+.| |+++++
T Consensus 116 ~~~p~~~~--~--~~~~~~~l~~-~~~~~--g~~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSV--V--KHSDRAFIDK-AFETS--MWIYSI 145 (200)
T ss_dssp ECCCC-----------CHHHHHH-HHHHE--EEEEEE
T ss_pred ECCCchhc--c--CchhHHHHHH-HHHhc--CcEEEE
Confidence 99874431 1 1123578888 67777 454443
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.23 E-value=1.6e-11 Score=102.41 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=79.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-----CCcEEEEEECChHHHHHHHhchhcccC-CCCCCCeEEEEcchHHHHh---c
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELE---S 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~~~~~D~~~~l~---~ 171 (251)
.++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...+. ....++++++.+|+.+... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 356899999999999999988863 235999999999999999998764310 0013689999999987430 1
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
..++||+|+++...+. + ++. +.+.|+|||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~-------~-----~~~-~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE-------L-----PEI-LVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS-------C-----CHH-HHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH-------H-----HHH-HHHhcCCCcEEEEEEc
Confidence 2368999999865322 1 255 6788999999988753
No 189
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=4.7e-11 Score=96.18 Aligned_cols=103 Identities=17% Similarity=0.285 Sum_probs=79.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|..+..+++. + .+++++|+++.+++.+++++ ++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ-G-HDVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVD-QISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTS-CCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC-C-CcEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccC-CCCCCceeEEE
Confidence 56789999999999999999886 3 59999999999999999864 3589999998764 22347899999
Q ss_pred EcCC-CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~-~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
++.. .+.. .+ -....+++. +.+.|+|||.+++...
T Consensus 113 ~~~~~~~~~-~~---~~~~~~l~~-~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 113 SAGNVMGFL-AE---DGREPALAN-IHRALGADGRAVIGFG 148 (195)
T ss_dssp ECCCCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred ECCcHHhhc-Ch---HHHHHHHHH-HHHHhCCCCEEEEEeC
Confidence 9732 1110 10 012578888 7999999999988654
No 190
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.22 E-value=1e-11 Score=108.88 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=82.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccC---CCCCCCeEEEEcchHHHH-----hcC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE---AFSDPRLELVINDARAEL-----ESR 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~---~~~~~rv~~~~~D~~~~l-----~~~ 172 (251)
+++.+|||||||+|..+..+++.+ ..+++++|+++.+++.|++++..... .....+++++++|+.+.. ...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 356899999999999999988753 57999999999999999988753210 001247999999988752 112
Q ss_pred CCceeEEEEcCCCCCCCCcccCC-ccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 KESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l-~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.++||+|++...-++. . ... ....+++. ++++|+|||.+++..
T Consensus 112 ~~~fD~V~~~~~l~~~--~-~~~~~~~~~l~~-~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYS--F-ESYEQADMMLRN-ACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGGG--G-GSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhc--c-CCHHHHHHHHHH-HHHHhCCCcEEEEec
Confidence 3589999997643331 0 011 12478898 799999999999865
No 191
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.22 E-value=2.5e-11 Score=102.09 Aligned_cols=103 Identities=24% Similarity=0.284 Sum_probs=78.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...+ .++++++.+|+..-+. ...+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~-~~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDGSKGFP-PKAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCcccCCC-CCCCccEEE
Confidence 4567999999999999999988754 689999999999999999876442 2469999999833222 124699999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
++...+. +. +. +.+.|+|||++++....+
T Consensus 164 ~~~~~~~-------~~-----~~-~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 164 VTAGAPK-------IP-----EP-LIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ECSBBSS-------CC-----HH-HHHTEEEEEEEEEEECSS
T ss_pred ECCcHHH-------HH-----HH-HHHhcCCCcEEEEEEecC
Confidence 9864322 11 24 578999999999877543
No 192
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.21 E-value=2.1e-11 Score=96.47 Aligned_cols=122 Identities=20% Similarity=0.322 Sum_probs=84.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH-----h--cC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-----E--SR 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l-----~--~~ 172 (251)
.++.+|||+|||+|.++..+++. .+..+++++|+++ +++. ++++++.+|+.+.- . ..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 45679999999999999999886 3336999999999 6421 57899999987652 1 23
Q ss_pred CCceeEEEEcCCCCCCCCcccCCc-------cHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCce
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLY-------TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~-------~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (251)
+++||+|+++.+.++...+ ... ...+++. +.++|+|||.+++..... .....+.+.++..|..+
T Consensus 86 ~~~~D~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~-~~~~L~~gG~l~~~~~~~------~~~~~~~~~~~~~~~~~ 156 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTP--AVDIPRAMYLVELALEM-CRDVLAPGGSFVVKVFQG------EGFDEYLREIRSLFTKV 156 (180)
T ss_dssp TCCEEEEEECCCCCCCSCH--HHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEESS------TTHHHHHHHHHHHEEEE
T ss_pred CCceeEEEECCCccccCCC--ccchHHHHHHHHHHHHH-HHHHcCCCcEEEEEEecC------CcHHHHHHHHHHhhhhE
Confidence 4689999998764431111 000 1478888 799999999998865221 12345556666666554
Q ss_pred e
Q 025534 246 Y 246 (251)
Q Consensus 246 ~ 246 (251)
.
T Consensus 157 ~ 157 (180)
T 1ej0_A 157 K 157 (180)
T ss_dssp E
T ss_pred E
Confidence 3
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.21 E-value=4.6e-11 Score=99.56 Aligned_cols=107 Identities=23% Similarity=0.323 Sum_probs=79.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccC-CCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++...+. .+..++++++.+|+..... ..++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 456899999999999999988762 335999999999999999988764210 0013579999999875422 2468999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
|+++.+.+ .+ ++. +.+.|+|||++++...+
T Consensus 155 i~~~~~~~-------~~-----~~~-~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAP-------VV-----PQA-LIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBS-------SC-----CHH-HHHTEEEEEEEEEEESC
T ss_pred EEECCchH-------HH-----HHH-HHHhcCCCcEEEEEEec
Confidence 99986532 12 245 68899999999987654
No 194
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.20 E-value=6.1e-11 Score=107.87 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=79.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchh-------cccCCCCCCCeEEEEcchHHHHhcC-
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-------VNKEAFSDPRLELVINDARAELESR- 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-------~~~~~~~~~rv~~~~~D~~~~l~~~- 172 (251)
.+..+|||||||+|.++..+++..+..+|++||+++.++++|+++.. ..+ ...++++++++|+.+.--..
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G--l~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG--KKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT--BCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC--CCCCCeEEEECcccCCccccc
Confidence 45689999999999999998876565679999999999999987532 111 12368999999987643211
Q ss_pred CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
-..||+|+++.+.. .+ ...+.+++ +.+.|||||+|++.
T Consensus 250 ~~~aDVVf~Nn~~F---~p----dl~~aL~E-i~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 IANTSVIFVNNFAF---GP----EVDHQLKE-RFANMKEGGRIVSS 287 (438)
T ss_dssp HHTCSEEEECCTTC---CH----HHHHHHHH-HHTTSCTTCEEEES
T ss_pred cCCccEEEEccccc---Cc----hHHHHHHH-HHHcCCCCcEEEEe
Confidence 14699999986532 11 12355667 68999999999875
No 195
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.20 E-value=5.8e-11 Score=99.24 Aligned_cols=101 Identities=13% Similarity=0.239 Sum_probs=77.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.|++.+ ++++++.+|+.+.. .+++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--LGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--cCCCCcEEE
Confidence 567899999999999999998864 38999999999999999863 46899999987642 257899999
Q ss_pred EcC--CCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDL--ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~--~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.. ..+.. .+ -....+++. ++++|+|||.+++..
T Consensus 106 ~~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGYLK-TT---EELGAAVAS-FAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGGCC-SH---HHHHHHHHH-HHHTEEEEEEEEECC
T ss_pred EcCchHhhcC-CH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 632 11110 11 112478888 799999999999864
No 196
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.20 E-value=6.8e-11 Score=102.73 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=74.0
Q ss_pred CCCeEEEEecCchHHHHHH----HhcCCCcEE--EEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh-----
Q 025534 102 NPKTIFIMGGGEGSTAREI----LRHKTVEKV--VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE----- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l----~~~~~~~~v--~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~----- 170 (251)
++.+|||||||+|.++..+ +...+...| ++||++++|++.|++.+.... ....-++++..+|+.++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 3568999999999765433 322222444 999999999999998864221 0111234556777766542
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 171 ~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..+++||+|++...-++...+ ..++++ ++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~------~~~l~~-~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDI------PATLKF-FHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCH------HHHHHH-HHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCH------HHHHHH-HHHHcCCCcEEEEEE
Confidence 135789999987653331122 468898 799999999998754
No 197
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.20 E-value=3.9e-11 Score=99.42 Aligned_cols=110 Identities=13% Similarity=0.045 Sum_probs=76.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHH----HhchhcccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFC----KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a----~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 176 (251)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.+ ++..... ..++++++++|+.+. ....+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~l-~~~~~~- 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAERL-PPLSGV- 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTTC-CSCCCE-
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhhC-CCCCCC-
Confidence 456899999999999999999875557999999999988853 3332222 235899999998873 333344
Q ss_pred eEEEEcCCCCCCCCc-ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGP-CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p-~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|.|++..+... .. .......++++. ++++|||||++++..
T Consensus 100 d~v~~~~~~~~--~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGS--LLRGVLGSSPEMLRG-MAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHH--HHHHHHTSSSHHHHH-HHHTEEEEEEEEEEE
T ss_pred CEEEEEccchh--hhhhhhccHHHHHHH-HHHHcCCCcEEEEEe
Confidence 87775543100 00 000001478888 799999999998854
No 198
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.19 E-value=1.8e-11 Score=100.37 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=75.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.+.+|||||||+|.++..++...+..+|+++|+|+.+++.+++++..++ ...++++ .|..... .+++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g---~~~~v~~--~d~~~~~--~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK---TTIKYRF--LNKESDV--YKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC---CSSEEEE--ECCHHHH--TTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC---CCccEEE--ecccccC--CCCCcChhh
Confidence 56889999999999999998876555699999999999999999987653 1124555 6665542 457899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
....-|...... ...+ . +.+.|+|||+++-.
T Consensus 121 a~k~LHlL~~~~-----~al~-~-v~~~L~pggvfISf 151 (200)
T 3fzg_A 121 LLKMLPVLKQQD-----VNIL-D-FLQLFHTQNFVISF 151 (200)
T ss_dssp EETCHHHHHHTT-----CCHH-H-HHHTCEEEEEEEEE
T ss_pred HhhHHHhhhhhH-----HHHH-H-HHHHhCCCCEEEEe
Confidence 875422100000 0123 5 58899999998853
No 199
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.19 E-value=1.3e-10 Score=107.47 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=85.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC-cEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC-CceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-ESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~-~~fD~ 178 (251)
.++.+|||+|||+|+.+..+++..+. .+|+++|+++..++.+++++...+ -++++++.+|+.++..... ++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhhccCCCCE
Confidence 45679999999999999999886433 699999999999999999876542 2579999999877532222 67999
Q ss_pred EEEcCCCCCCC----Ccc-------cCC-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 179 IIGDLADPIEG----GPC-------YKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 179 Ii~D~~~~~~~----~p~-------~~l-----~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
|++|+|..... .|. ..+ ...++++. +.+.|||||+++..+.+
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLES-AARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCC
Confidence 99998742210 110 000 01567888 79999999999976654
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.19 E-value=6.3e-11 Score=108.86 Aligned_cols=108 Identities=11% Similarity=0.085 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHH-------HhchhcccCCCCCCCeEEEEcchHH---HHh
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFC-------KSYLVVNKEAFSDPRLELVINDARA---ELE 170 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------~~~~~~~~~~~~~~rv~~~~~D~~~---~l~ 170 (251)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+ +...+++++.+|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCccccccccc
Confidence 456899999999999999999864456899999999999999 77665332 112589999986542 121
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 171 ~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
...++||+|+++.+. . .+ .-.+.++. +.+.|+|||++++.
T Consensus 319 ~~~~~FDvIvvn~~l-~--~~----d~~~~L~e-l~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-F--DE----DLNKKVEK-ILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTT-C--CH----HHHHHHHH-HHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcc-c--cc----cHHHHHHH-HHHhCCCCeEEEEe
Confidence 123689999987432 1 11 12356777 78999999999875
No 201
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.18 E-value=1.7e-10 Score=105.98 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=85.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~I 179 (251)
.++.+|||+|||+|+.+..+++..+..+|+++|+++..++.+++++...+ -+++++.+|+.++... .+++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 45679999999999999999886544799999999999999999887543 2478999998775421 24689999
Q ss_pred EEcCCCCCC----CCccc-------CC-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 180 IGDLADPIE----GGPCY-------KL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 180 i~D~~~~~~----~~p~~-------~l-----~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
++|+|.... ..|.. .+ ...++++. +.+.|||||+++..+++
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~-a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA-IWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHH-HGGGEEEEEEEEEEESC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECC
Confidence 999874321 01100 00 11477888 79999999999987654
No 202
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.17 E-value=1.3e-10 Score=100.59 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=80.8
Q ss_pred CCCeEEEEecCc---hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH--H-------
Q 025534 102 NPKTIFIMGGGE---GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--L------- 169 (251)
Q Consensus 102 ~~~~VL~iG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~--l------- 169 (251)
...+|||||||+ |.++..+.+..+..+|++||+||.|++.|++.+.. .++++++.+|+++. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 98877666654447999999999999999998742 36899999998753 1
Q ss_pred hcCC-CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 170 ESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 170 ~~~~-~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
...+ ++||+|++...-++. + .. ....+++. ++++|+|||.|++....
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~--~-d~-~~~~~l~~-~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYL--S-PD-VVDRVVGA-YRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGS--C-TT-THHHHHHH-HHHHSCTTCEEEEEEEB
T ss_pred ccCCCCCCEEEEEechhhhC--C-cH-HHHHHHHH-HHHhCCCCcEEEEEEec
Confidence 1111 479999987653321 1 01 23578898 79999999999887643
No 203
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=2.7e-11 Score=103.56 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=76.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|..+..+++ ++ .+|+++|+++.+++.+++. ++++++.+|+.++ ...+++||+|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~-~~~~~~fD~v~ 99 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-QG-LFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENL-ALPDKSVDGVI 99 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-TT-CEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSC-CSCTTCBSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHh-CC-CEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhC-CCCCCCEeEEE
Confidence 4678999999999999999988 33 6999999999999987764 3799999998763 33357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.... -..+++. ++++|| ||.+++..
T Consensus 100 ~~~~l~~~~~------~~~~l~~-~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 100 SILAIHHFSH------LEKSFQE-MQRIIR-DGTIVLLT 130 (261)
T ss_dssp EESCGGGCSS------HHHHHHH-HHHHBC-SSCEEEEE
T ss_pred EcchHhhccC------HHHHHHH-HHHHhC-CcEEEEEE
Confidence 9864222111 2578898 799999 99665543
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.16 E-value=1.2e-10 Score=105.17 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=77.2
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
..++.+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++...+ ..++++++++|+.+.. ...++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g---l~~~i~~~~~D~~~~~-~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG---VLDKIKFIQGDATQLS-QYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT---CGGGCEEEECCGGGGG-GTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhhCC-cccCCcCEE
Confidence 356689999999999999999987543489999999999999999987543 2358999999998863 334789999
Q ss_pred EEcCCCCCCCCcccCC--ccHHHHHHHHcccC
Q 025534 180 IGDLADPIEGGPCYKL--YTKSFYEFVVKPRL 209 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l--~~~ef~~~~~~~~L 209 (251)
++|+|.....+....+ .-.++++. ++++|
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~-l~r~l 321 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNE-LAKVL 321 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHH-HHHHE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHH-HHHHc
Confidence 9998743211110111 12567777 68888
No 205
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.16 E-value=6.5e-11 Score=97.99 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=76.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH-hcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l-~~~~~~fD~I 179 (251)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++ .+++.+|+.++. ...+++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-----------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-----------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-----------CcEEEcchhhcCCCCCCCccCEE
Confidence 46789999999999999999987 4 69999999999999999753 267888876542 2234789999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++...-..... ..++++. +++.|+|||.+++..
T Consensus 98 ~~~~~l~~~~~------~~~~l~~-~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEHLFD------PWAVIEK-VKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGGSSC------HHHHHHH-TGGGEEEEEEEEEEE
T ss_pred EECChhhhcCC------HHHHHHH-HHHHcCCCCEEEEEe
Confidence 98753221111 2478888 799999999998864
No 206
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.16 E-value=4.7e-11 Score=97.49 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=82.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCC--CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH---------
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKT--VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--------- 169 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l--------- 169 (251)
.++.+|||||||+|.++..+++..+ ..+|+++|+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 4567999999999999999988643 4799999999931 1256888888876532
Q ss_pred -------------h--cCCCceeEEEEcCCCCCCCCc-ccCCc----cHHHHHHHHcccCCCCcEEEEecCCCCCCCChH
Q 025534 170 -------------E--SRKESYDVIIGDLADPIEGGP-CYKLY----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTE 229 (251)
Q Consensus 170 -------------~--~~~~~fD~Ii~D~~~~~~~~p-~~~l~----~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~ 229 (251)
. ...++||+|+++...++.... ..... ...+++. +.+.|+|||.+++..... +
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~------~ 158 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHF-MEQYINIGGTYIVKMYLG------S 158 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEECS------T
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEeCC------C
Confidence 0 124689999999753331000 00000 1236777 689999999999864221 1
Q ss_pred HHHHHHHHHHhhCCcee
Q 025534 230 VFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 230 ~~~~i~~~l~~~F~~v~ 246 (251)
....+...++..|..+.
T Consensus 159 ~~~~l~~~l~~~f~~v~ 175 (201)
T 2plw_A 159 QTNNLKTYLKGMFQLVH 175 (201)
T ss_dssp THHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHheEE
Confidence 24456667777776554
No 207
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.15 E-value=5.5e-11 Score=106.71 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
..+++|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..++++++.+|+++.-...++.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS---GSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT---TGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC---cccceEEEEccccccCCCCCCCcCEEE
Confidence 4578999999999999999988655579999999 999999999876432 236899999998653000136899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .. -....+++. +++.|+|||.+++..
T Consensus 254 ~~~vlh~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 254 MSQFLDCF-SE---EEVISILTR-VAQSIGKDSKVYIME 287 (363)
T ss_dssp EESCSTTS-CH---HHHHHHHHH-HHHHCCTTCEEEEEE
T ss_pred EechhhhC-CH---HHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 86542210 11 012467888 799999999987743
No 208
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.15 E-value=2.4e-10 Score=102.93 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=77.3
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC--------
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-------- 173 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~-------- 173 (251)
.+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++....
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhccccccc
Confidence 3578999999999999988874 3699999999999999999988664 2589999999999875321
Q ss_pred -------CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 174 -------ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 174 -------~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
.+||+|++|+|... + ..+++ +.|+++|.++.-+..|
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~g-------~-~~~~~-----~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRSG-------L-DSETE-----KMVQAYPRILYISCNP 329 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTTC-------C-CHHHH-----HHHTTSSEEEEEESCH
T ss_pred cccccccCCCCEEEECcCccc-------c-HHHHH-----HHHhCCCEEEEEECCH
Confidence 27999999987421 1 12333 3455788777665443
No 209
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.14 E-value=4.7e-12 Score=108.65 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=75.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCC-------------------------CC
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------DP 156 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~~ 156 (251)
++.+|||||||+|..+..++.. +..+|+++|+|+.+++.|++++......++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999877766654 445899999999999999987643211110 01
Q ss_pred CeE-EEEcchHHHHh---cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 157 RLE-LVINDARAELE---SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 157 rv~-~~~~D~~~~l~---~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++ ++.+|..+... ...++||+|++...-+.. .+. .-.-...++. ++++|||||.|++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i-~~~-~~~~~~~l~~-i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA-CCS-LDAYRAALCN-LASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH-CSS-HHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHh-cCC-HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 243 88888776321 124689999998542110 000 0011357777 789999999998764
No 210
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.14 E-value=3e-10 Score=102.10 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=81.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+++++|+ |.+++.|++++...+ ..++++++.+|+++. .+..||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---l~~~v~~~~~d~~~~---~p~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG---LADRCEILPGDFFET---IPDGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTTC---CCSSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC---cCCceEEeccCCCCC---CCCCceEEE
Confidence 4568999999999999999998755579999999 999999999876432 247899999998732 234899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .. .....+++. +++.|+|||.+++..
T Consensus 274 ~~~vlh~~-~d---~~~~~~L~~-~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 274 IKHVLHDW-DD---DDVVRILRR-IATAMKPDSRLLVID 307 (369)
T ss_dssp EESCGGGS-CH---HHHHHHHHH-HHTTCCTTCEEEEEE
T ss_pred hhhhhccC-CH---HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 87542210 10 011368898 799999999988753
No 211
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.14 E-value=1.6e-10 Score=102.23 Aligned_cols=106 Identities=8% Similarity=0.022 Sum_probs=80.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
+..+|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..++++++.+|+.+ ..+..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~p~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG---LSGRAQVVVGSFFD---PLPAGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTS---CCCCSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC---cCcCeEEecCCCCC---CCCCCCcEEEE
Confidence 358999999999999999988655579999999 999999999876432 24789999999863 22348999998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-+....+ ....+++. +++.|+|||.+++..
T Consensus 242 ~~vlh~~~~~----~~~~~l~~-~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHDWDDL----SAVAILRR-CAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGGSCHH----HHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred ehhhccCCHH----HHHHHHHH-HHHhcCCCCEEEEEe
Confidence 7542210010 12578898 799999999988754
No 212
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.14 E-value=1.3e-10 Score=99.41 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=77.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChH------HHHHHHhchhcccCCCCCCCeEEEEcc-hHHH-Hhc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEE------VVEFCKSYLVVNKEAFSDPRLELVIND-ARAE-LES 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~------vi~~a~~~~~~~~~~~~~~rv~~~~~D-~~~~-l~~ 171 (251)
.++.+|||||||+|.++..+++.. +..+|+++|+++. +++.|++++...+ ..++++++.+| .+.. +..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP---LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST---TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC---CCCceEEEECChhhhccCCC
Confidence 466899999999999999998863 3369999999997 9999999876432 23689999998 2211 111
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..++||+|++...-.....+ ..+.+. ++++++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~------~~~~~~-~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASA------NALALL-FKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCH------HHHHHH-HHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCCH------HHHHHH-HHHHhCCCCEEEEEE
Confidence 34789999987543221111 235555 577777799988764
No 213
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.14 E-value=1.7e-10 Score=105.97 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=80.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -. ++++.+|+.+++. ++||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ng----l~-v~~~~~d~~~~~~---~~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINN----VD-AEFEVASDREVSV---KGFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT----CC-EEEEECCTTTCCC---TTCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChHHcCc---cCCCEEE
Confidence 45689999999999999999886 3599999999999999999987663 23 9999999988753 2899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+|++.. + ...++.+. ++ .|+|+|++.+.++
T Consensus 359 ~dPPr~---g-----~~~~~~~~-l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 359 VDPPRA---G-----LHPRLVKR-LN-REKPGVIVYVSCN 388 (425)
T ss_dssp ECCCTT---C-----SCHHHHHH-HH-HHCCSEEEEEESC
T ss_pred EcCCcc---c-----hHHHHHHH-HH-hcCCCcEEEEECC
Confidence 998732 1 12457776 44 5999999988653
No 214
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.13 E-value=3.8e-11 Score=111.88 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=79.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++..++ ..++++++.+|++++ ..+++||+|++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~g---l~~~v~~~~~d~~~~--~~~~~fD~Ivs 230 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEV--SLPEQVDIIIS 230 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEEC
T ss_pred CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcC---CCCcEEEEECchhhC--ccCCCeEEEEE
Confidence 5689999999999999999886 456999999999 8999999876543 246899999998774 22468999999
Q ss_pred cCCC-CCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLAD-PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~-~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++. ... .. ...+.+.. +++.|+|||++++..
T Consensus 231 ~~~~~~~~-~e----~~~~~l~~-~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 231 EPMGYMLF-NE----RMLESYLH-AKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCHHHHT-CH----HHHHHHHH-GGGGEEEEEEEESCE
T ss_pred eCchHhcC-cH----HHHHHHHH-HHHhcCCCCEEEEEe
Confidence 8651 110 00 12356667 689999999998543
No 215
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.13 E-value=1.9e-10 Score=98.99 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=72.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH-HHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~-~l~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++. + .+|++||+|+.|++.|++++... .++....|... ......++||+|
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~-g-~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER-G-ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc-C-CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 45689999999999999999986 3 59999999999999999986422 23333333211 001124689999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+++..-+.. .+ -....+++. +.++| |||++++...
T Consensus 115 v~~~~l~~~-~~---~~~~~~l~~-l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINRF-TT---EEARRACLG-MLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGGS-CH---HHHHHHHHH-HHHHH-TTSEEEEEEE
T ss_pred EEhhhhHhC-CH---HHHHHHHHH-HHHhC-cCcEEEEEec
Confidence 998642210 11 012457787 68899 9999998764
No 216
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.13 E-value=9.3e-11 Score=95.25 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=81.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC---------cEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-EcchHHHHh
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV---------EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELE 170 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-~~D~~~~l~ 170 (251)
.++.+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|..+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45689999999999999999987433 689999999831 12468888 888654321
Q ss_pred -------cCCCceeEEEEcCCCCCCCCcccCCcc--------HHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025534 171 -------SRKESYDVIIGDLADPIEGGPCYKLYT--------KSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (251)
Q Consensus 171 -------~~~~~fD~Ii~D~~~~~~~~p~~~l~~--------~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~ 235 (251)
..+++||+|+++...+.. +. .... ..+++. +.+.|+|||.+++..... .....+.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~------~~~~~~~ 155 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNAT-GF--RDLDHDRLISLCLTLLSV-TPDILQPGGTFLCKTWAG------SQSRRLQ 155 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCC-SC--HHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECCS------GGGHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCC-CC--cccCHHHHHHHHHHHHHH-HHHHhcCCCEEEEEecCC------ccHHHHH
Confidence 123589999998642221 10 1111 367888 689999999999875321 1234566
Q ss_pred HHHHhhCCcee
Q 025534 236 NTLRQVFKCGY 246 (251)
Q Consensus 236 ~~l~~~F~~v~ 246 (251)
..++..|..+.
T Consensus 156 ~~l~~~f~~v~ 166 (196)
T 2nyu_A 156 RRLTEEFQNVR 166 (196)
T ss_dssp HHHHHHEEEEE
T ss_pred HHHHHHhcceE
Confidence 66666776554
No 217
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.13 E-value=1.6e-10 Score=103.60 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.+ +..||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG---LADRVTVAEGDFFKPL---PVTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SCCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCcC---CCCCCEEE
Confidence 3568999999999999999988755569999999 999999999876432 2358999999987532 34599999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .. .....+++. +++.|+|||.+++..
T Consensus 254 ~~~vl~~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 254 LSFVLLNW-SD---EDALTILRG-CVRALEPGGRLLVLD 287 (374)
T ss_dssp EESCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeccccCC-CH---HHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 87542210 10 011378898 799999999887654
No 218
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.13 E-value=1.1e-11 Score=105.22 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=79.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCC-------------------------CC
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------DP 156 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~~ 156 (251)
++.+|||||||+|.++..+++... .+|+++|+++.+++.+++++......++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457899999999999988887642 5899999999999999988653210000 01
Q ss_pred Ce-EEEEcchHHHHhcCC---CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 157 RL-ELVINDARAELESRK---ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 157 rv-~~~~~D~~~~l~~~~---~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++ +++.+|+.+...... ++||+|++...-+.. .+ ..-....+++. ++++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~-~~-~~~~~~~~l~~-~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAA-CP-DLPAYRTALRN-LGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH-CS-SHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhh-cC-ChHHHHHHHHH-HHhhCCCCcEEEEEe
Confidence 27 899999876532123 789999987542100 00 00012468888 799999999988754
No 219
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.13 E-value=1.3e-10 Score=99.21 Aligned_cols=99 Identities=17% Similarity=0.270 Sum_probs=76.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+++.+|||||||+|.++..+++. + .+|+++|+++.+++.|++... . .++.+|+.+. ...+++||+|+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~--------~--~~~~~d~~~~-~~~~~~fD~v~ 119 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER-G-FEVVLVDPSKEMLEVAREKGV--------K--NVVEAKAEDL-PFPSGAFEAVL 119 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHHTC--------S--CEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc-C-CeEEEEeCCHHHHHHHHhhcC--------C--CEEECcHHHC-CCCCCCEEEEE
Confidence 46789999999999999999886 3 589999999999999998743 1 2788887653 22357899999
Q ss_pred EcCC-CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~-~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+... .+. .+ . ...+++. ++++|+|||.+++..
T Consensus 120 ~~~~~~~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 120 ALGDVLSY--VE--N--KDKAFSE-IRRVLVPDGLLIATV 152 (260)
T ss_dssp ECSSHHHH--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhhc--cc--c--HHHHHHH-HHHHcCCCeEEEEEe
Confidence 8642 211 01 1 3578898 799999999998865
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.12 E-value=1.2e-10 Score=103.57 Aligned_cols=108 Identities=12% Similarity=0.160 Sum_probs=81.7
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
+.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++...+ ..++++++.+|+.+.-...++.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD---LGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC---CCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 78999999999999999998755579999999 899999999876432 23689999999876531134679999996
Q ss_pred CCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 183 ~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..-+.. .+ -....+++. +++.|+|||.+++..
T Consensus 256 ~vlh~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHYF-DA---REAREVIGH-AAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGGS-CH---HHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred cccccC-CH---HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 542210 10 012578888 799999999988753
No 221
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.11 E-value=1.8e-10 Score=98.50 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=75.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++.. ++++++.+|+.+. ...+++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL-PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC-SBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC-CCCCCceeEEE
Confidence 4568999999999999999988643469999999999999999863 4688999997653 23347899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+... + .+++. +.++|+|||.+++...
T Consensus 154 ~~~~------~-------~~l~~-~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 154 RIYA------P-------CKAEE-LARVVKPGGWVITATP 179 (269)
T ss_dssp EESC------C-------CCHHH-HHHHEEEEEEEEEEEE
T ss_pred EeCC------h-------hhHHH-HHHhcCCCcEEEEEEc
Confidence 7532 1 13577 6899999999988653
No 222
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=2.3e-10 Score=99.20 Aligned_cols=110 Identities=16% Similarity=0.161 Sum_probs=75.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEEC-ChHHHHHHHhchhcccC---CCC---CCCeEEEEcc---h-HHHH
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI-DEEVVEFCKSYLVVNKE---AFS---DPRLELVIND---A-RAEL 169 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~a~~~~~~~~~---~~~---~~rv~~~~~D---~-~~~l 169 (251)
.++++|||||||+|.++..+++. +..+|+++|+ ++.+++.|+++...|.. .+. .++++++..| . ....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 35679999999999999988886 3459999999 89999999998843210 010 1478888444 2 2222
Q ss_pred hc-CCCceeEEEE-cCCCCCCCCcccCCccHHHHHHHHcccCC---C--CcEEEEec
Q 025534 170 ES-RKESYDVIIG-DLADPIEGGPCYKLYTKSFYEFVVKPRLN---P--EGIFVTQA 219 (251)
Q Consensus 170 ~~-~~~~fD~Ii~-D~~~~~~~~p~~~l~~~ef~~~~~~~~L~---p--gG~l~~~~ 219 (251)
.. ..++||+|++ |..... + ....+++. ++++|+ | ||++++-.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~---~----~~~~ll~~-l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH---Q----AHDALLRS-VKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG---G----GHHHHHHH-HHHHBCCTTTCTTCEEEEEE
T ss_pred hhccCCCCCEEEEeCcccCh---H----HHHHHHHH-HHHHhcccCCCCCCEEEEEE
Confidence 11 2478999997 554321 1 13467888 799999 9 99876543
No 223
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.09 E-value=2.7e-10 Score=101.60 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=80.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.+ +..||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG---LSDRVDVVEGDFFEPL---PRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCCC---CCCccEEE
Confidence 3568999999999999999988755568999999 999999999876432 2358999999987532 34599999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .. ....++++. +++.|+|||.+++..
T Consensus 255 ~~~vl~~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 255 LSFVLLNW-PD---HDAVRILTR-CAEALEPGGRILIHE 288 (360)
T ss_dssp EESCGGGS-CH---HHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EcccccCC-CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 87542210 10 011468898 799999999887653
No 224
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.09 E-value=4.8e-10 Score=100.18 Aligned_cols=106 Identities=11% Similarity=0.118 Sum_probs=79.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+. ....+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG---VADRMRGIAVDIYKE---SYPEADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CTTTEEEEECCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC---CCCCEEEEeCccccC---CCCCCCEEE
Confidence 4568999999999999999998755569999999 999999999876432 235799999998764 123459999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+...-+. -+ .-....+++. +++.|+|||.+++.
T Consensus 262 ~~~vlh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 262 FCRILYS--AN--EQLSTIMCKK-AFDAMRSGGRLLIL 294 (359)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEE
T ss_pred Eechhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8754221 01 0112578888 79999999998654
No 225
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.08 E-value=1.8e-10 Score=101.57 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=80.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||+|||+|..+..+++..+..+++++|++ .+++.|++++...+ ..++++++.+|+.+. ..++.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~--~~~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG---VASRYHTIAGSAFEV--DYGNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT---CGGGEEEEESCTTTS--CCCSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC---CCcceEEEecccccC--CCCCCCcEEE
Confidence 45689999999999999999887545699999999 99999999876432 235799999998763 2234599999
Q ss_pred EcCC-CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~-~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+... ..+ .. -...++++. +++.|+|||.+++..
T Consensus 238 ~~~~l~~~--~~---~~~~~~l~~-~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 238 LPNFLHHF--DV---ATCEQLLRK-IKTALAVEGKVIVFD 271 (335)
T ss_dssp EESCGGGS--CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcchhccC--CH---HHHHHHHHH-HHHhCCCCcEEEEEe
Confidence 9543 222 10 112478888 799999999777643
No 226
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.07 E-value=8.3e-10 Score=101.49 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=80.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 177 (251)
..+.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..++ -++++++.+|+.+++.. ..++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~----~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEECCHHHHhhhhhhhcCCCC
Confidence 35679999999999999999986 3699999999999999999987653 24899999999886532 246899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++|++... + .++++. +. .++|++++.+.+
T Consensus 359 ~Vv~dPPr~g-------~--~~~~~~-l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAG-------A--AGVMQQ-II-KLEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTC-------C--HHHHHH-HH-HHCCSEEEEEES
T ss_pred EEEECCCCcc-------H--HHHHHH-HH-hcCCCeEEEEEC
Confidence 9999987421 1 256666 44 488999887754
No 227
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.07 E-value=3.6e-10 Score=98.65 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=69.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-EcchHHHHh-cCC-Ccee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELE-SRK-ESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-~~D~~~~l~-~~~-~~fD 177 (251)
..+++|||||||+|.++..++++ +..+|++||+++.|++.+.+. ++++... ..|++..-. ..+ ..||
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---------~~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---------DDRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT---------CTTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh---------CcccceecccCceecchhhCCCCCCC
Confidence 45679999999999999999887 457999999999999985442 2444333 234332211 112 3499
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|++|..... + ..++.. ++++|+|||.+++-
T Consensus 154 ~v~~d~sf~s-------l--~~vL~e-~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFIS-------L--NLILPA-LAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSSC-------G--GGTHHH-HHHHSCTTCEEEEE
T ss_pred EEEEEeeHhh-------H--HHHHHH-HHHHcCcCCEEEEE
Confidence 9999975321 1 356777 79999999998774
No 228
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.07 E-value=5.3e-10 Score=108.96 Aligned_cols=107 Identities=21% Similarity=0.192 Sum_probs=79.7
Q ss_pred CCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhc--ccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVV--NKEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~--~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
++.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+.. +......++++++++|+.+. ....++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCeeE
Confidence 67899999999999999999874 346999999999999999986542 11111236899999998774 234578999
Q ss_pred EEEcCCCCCCCCcccCCcc---HHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~---~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|++...- .++.. ..+++. +.++|+|| .+++.
T Consensus 800 VV~~eVL-------eHL~dp~l~~~L~e-I~RvLKPG-~LIIS 833 (950)
T 3htx_A 800 GTCLEVI-------EHMEEDQACEFGEK-VLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEESCG-------GGSCHHHHHHHHHH-HHHTTCCS-EEEEE
T ss_pred EEEeCch-------hhCChHHHHHHHHH-HHHHcCCC-EEEEE
Confidence 9996432 22222 347888 79999999 55553
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.06 E-value=6.1e-11 Score=102.94 Aligned_cols=131 Identities=12% Similarity=-0.002 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE--EcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~--~~D~~~~l~~~~~~fD~ 178 (251)
.+..+|||||||+|.++..+++. .+|++||+++ ++..+++. +..... ...+++++ .+|+.++ .+++||+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 151 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVET-FGWNLITFKSKVDVTKM---EPFQADT 151 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCC-TTGGGEEEECSCCGGGC---CCCCCSE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhh-cCCCeEEEeccCcHhhC---CCCCcCE
Confidence 35679999999999999999886 4899999999 43333322 111000 11278999 9998773 2578999
Q ss_pred EEEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCCc--EEEEecCCCCCCCChHHHHHHHHHHHhhCCcee
Q 025534 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 179 Ii~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG--~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (251)
|++|.. .....+. ....+..+++. +.+.|+||| .+++....| . .. ....+++.++..|..+.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~~v~~~~~~--~-~~-~~~~~l~~l~~~f~~v~ 216 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNV-ISRWLEYNQGCGFCVKVLNP--Y-SC-DVLEALMKMQARFGGGL 216 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHSTTCEEEEEESCC--C-SH-HHHHHHHHHHHHHCCEE
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHH-HHHHhccCCCcEEEEEeCCC--C-ch-hHHHHHHHHHHHcCCEE
Confidence 999976 2211110 00001136777 689999999 998865444 1 22 23355566666666554
No 230
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.06 E-value=1.6e-10 Score=102.04 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=79.7
Q ss_pred CeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcC
Q 025534 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDL 183 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~ 183 (251)
.+|||+|||+|..+..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+. .++.||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL---AGERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH---HTTSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC---CCCcEEEecCCCCCC---CCCCCCEEEEch
Confidence 8999999999999999988655569999999 999999999875332 236899999998762 246799999875
Q ss_pred CCC-CCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 184 ADP-IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 184 ~~~-~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.-+ + .+ -....+++. +++.|+|||.+++..
T Consensus 242 vl~~~--~~---~~~~~~l~~-~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 242 IIGDL--DE---AASLRLLGN-CREAMAGDGRVVVIE 272 (334)
T ss_dssp CGGGC--CH---HHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred hccCC--CH---HHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 422 2 11 012478888 799999999988764
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.06 E-value=1.9e-10 Score=104.33 Aligned_cols=97 Identities=16% Similarity=0.312 Sum_probs=70.1
Q ss_pred CCCCeEEEEecC------chHHHHHHHh-cCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHh-
Q 025534 101 PNPKTIFIMGGG------EGSTAREILR-HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELE- 170 (251)
Q Consensus 101 ~~~~~VL~iG~G------~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~- 170 (251)
.++.+||||||| +|+.+..+++ +.+..+|++||+++.+. . ..++++++++|+.+ +..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcEEEEecccccchhhh
Confidence 467899999999 5555555554 43457999999999972 1 23689999999876 331
Q ss_pred --cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 171 --SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 171 --~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
...++||+|++|....+ + ....+|+. ++++|||||++++.
T Consensus 282 l~~~d~sFDlVisdgsH~~---~----d~~~aL~e-l~rvLKPGGvlVi~ 323 (419)
T 3sso_A 282 IARRYGPFDIVIDDGSHIN---A----HVRTSFAA-LFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHCCEEEEEECSCCCH---H----HHHHHHHH-HGGGEEEEEEEEEE
T ss_pred hhcccCCccEEEECCcccc---h----hHHHHHHH-HHHhcCCCeEEEEE
Confidence 11478999999864211 1 12468888 79999999999985
No 232
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.05 E-value=3.4e-10 Score=93.95 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=72.1
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
+.+|||||||+|.++..+++. +++|+++.+++.+++. +++++.+|+.+. ....++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENL-PLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-CSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccC-CCCCCCeeEEEEc
Confidence 789999999999999887653 9999999999999975 578889997653 2234689999987
Q ss_pred CCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 183 ~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..-... + ...++++. +.+.|+|||.+++..
T Consensus 110 ~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICFV--D----DPERALKE-AYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGGS--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred chHhhc--c----CHHHHHHH-HHHHcCCCcEEEEEE
Confidence 542211 1 12578888 799999999998864
No 233
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.04 E-value=5.4e-11 Score=103.06 Aligned_cols=113 Identities=14% Similarity=0.119 Sum_probs=73.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCC--------------C------------
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS--------------D------------ 155 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~--------------~------------ 155 (251)
++.+|||||||+|..+..+.+.. ..+|+++|+++.+++.|++++......+. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56899999999999554444433 35999999999999999986542100000 0
Q ss_pred CCeEEEEcchHHHHh-----cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 156 PRLELVINDARAELE-----SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 156 ~rv~~~~~D~~~~l~-----~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
..++++..|+.+.+. ..+++||+|++...-++. .+ ..-.-..+++. ++++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~-~~~~~~~~l~~-~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV-SP-DLASFQRALDH-ITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH-CS-SHHHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhh-cC-CHHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 025677778876332 123569999998542110 00 00012468888 79999999998874
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.04 E-value=2.8e-10 Score=101.34 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=80.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC-----CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT-----VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 176 (251)
.+.+|||+|||+|.++..++++.+ ..+++++|+|+.+++.|+.++...+ .+++++++|+.... ..++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~~~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----QKMTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEESCTTSCC--CCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----CCceEEECCCCCcc--ccCCc
Confidence 457999999999999988877522 1589999999999999999877553 26899999976532 34789
Q ss_pred eEEEEcCCCCCCC--------Cc--ccCC--ccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEG--------GP--CYKL--YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~--------~p--~~~l--~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|++|+|..... .+ .... ....|++. +.+.|+|||++++-.
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQ-GMRYTKPGGYLFFLV 256 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHH-HHHHhCCCCEEEEEE
Confidence 9999998732100 00 0001 12368888 689999999888765
No 235
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.03 E-value=5.3e-10 Score=92.58 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=74.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCC-CCCCeEEEEcchHH-------------
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-SDPRLELVINDARA------------- 167 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-~~~rv~~~~~D~~~------------- 167 (251)
++++||++|+| ..+..+++.. ..+|+.||.|++..+.|++++...+ + ...+++++.+|+.+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g--~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANP--PAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSC--CCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcC--CCCCCceEEEEeCchhhhcccccccchhh
Confidence 57899999984 6777777754 4799999999999999999997543 1 04589999999643
Q ss_pred -----HHh---cC--CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 168 -----ELE---SR--KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 168 -----~l~---~~--~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+.. .. .++||+|++|... ..+++.. +.++|+|||++++
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----------~~~~~~~-~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-----------RVGCALA-TAFSITRPVTLLF 152 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-----------HHHHHHH-HHHHCSSCEEEEE
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-----------chhHHHH-HHHhcCCCeEEEE
Confidence 321 12 3689999999631 1255666 4689999999987
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.03 E-value=1.2e-10 Score=105.90 Aligned_cols=103 Identities=21% Similarity=0.269 Sum_probs=76.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
..+.+|||+|||+|.++..++++. +..+++++|+|+.+++.| ++++++++|..++. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~--~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE--PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC--CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC--ccCCCCEE
Confidence 346799999999999999998752 346999999999998765 36899999988753 24689999
Q ss_pred EEcCCCCCCCC---------ccc--------C------CccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGG---------PCY--------K------LYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~---------p~~--------~------l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++|||...... ... . -....|++. +.++|+|||.+++-.
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEK-AVRLLKPGGVLVFVV 164 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHH-HHHHhCCCCEEEEEE
Confidence 99987422101 000 0 011267888 689999999988765
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.03 E-value=7.9e-11 Score=101.64 Aligned_cols=131 Identities=12% Similarity=-0.007 Sum_probs=83.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE--EcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~--~~D~~~~l~~~~~~fD~ 178 (251)
.+..+|||||||+|..+..+++. .+|++||+++ ++..+++. +..... ...++.++ .+|+.++ .+++||+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 143 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL---PVERTDV 143 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS---CCCCCSE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC---CCCCCcE
Confidence 45679999999999999998886 5899999999 43322221 110000 11268999 8998763 2578999
Q ss_pred EEEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCCc--EEEEecCCCCCCCChHHHHHHHHHHHhhCCcee
Q 025534 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 179 Ii~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG--~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (251)
|++|.. .....+. .+..+..+++. +.++|+||| .+++....| . .. ....++..++..|..+.
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~fv~kv~~~--~-~~-~~~~~l~~l~~~f~~v~ 208 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILEL-LEKWKVKNPSADFVVKVLCP--Y-SV-EVMERLSVMQRKWGGGL 208 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHCTTCEEEEEESCT--T-SH-HHHHHHHHHHHHHCCEE
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHH-HHHHhccCCCeEEEEEeCCC--C-Ch-hHHHHHHHHHHHcCCEE
Confidence 999976 2211110 00001136777 689999999 998866434 1 12 23356666777776553
No 238
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.02 E-value=1.3e-10 Score=102.29 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=82.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEEC----ChHHHHHHHhchhcccCCCCCCCeEEEEc-chHHHHhcCCCc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI----DEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKES 175 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~a~~~~~~~~~~~~~~rv~~~~~-D~~~~l~~~~~~ 175 (251)
.++.+|||||||+|..+..+++. .+|++||+ ++..++.+ .... ...++++++.+ |+..+ ..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~~~--~~~~~v~~~~~~D~~~l---~~~~ 148 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PMST--YGWNLVRLQSGVDVFFI---PPER 148 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CCCS--TTGGGEEEECSCCTTTS---CCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hhhh--cCCCCeEEEeccccccC---CcCC
Confidence 34579999999999999999886 47999999 45333211 1110 11367999999 87654 2468
Q ss_pred eeEEEEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCcee
Q 025534 176 YDVIIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (251)
||+|++|..... .... .+..+...+.. +.+.|+|||.|++....+ . ......++..++..|..+.
T Consensus 149 fD~V~sd~~~~~-g~~~~d~~~~l~~L~~-~~~~LkpGG~~v~kv~~~--~--~~~~~~~l~~l~~~f~~v~ 214 (305)
T 2p41_A 149 CDTLLCDIGESS-PNPTVEAGRTLRVLNL-VENWLSNNTQFCVKVLNP--Y--MSSVIEKMEALQRKHGGAL 214 (305)
T ss_dssp CSEEEECCCCCC-SSHHHHHHHHHHHHHH-HHHHCCTTCEEEEEESCC--C--SHHHHHHHHHHHHHHCCEE
T ss_pred CCEEEECCcccc-CcchhhHHHHHHHHHH-HHHHhCCCCEEEEEeCCC--C--CchHHHHHHHHHHHcCCEE
Confidence 999999975321 0100 00001146676 689999999999876433 1 2334566677777777654
No 239
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.02 E-value=7e-09 Score=91.34 Aligned_cols=115 Identities=15% Similarity=0.052 Sum_probs=81.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC--CCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~fD 177 (251)
.++.+|||+|||+|+.+..+++. .+..+|+++|+++..++.+++++...+ -.+++++.+|+.++.... .++||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccccCCCC
Confidence 35679999999999999998875 334699999999999999999987543 257999999998764321 15799
Q ss_pred EEEEcCCCCCCC----Ccc--c-------CC-----ccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 178 VIIGDLADPIEG----GPC--Y-------KL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 178 ~Ii~D~~~~~~~----~p~--~-------~l-----~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
.|++|+|..... .|. . .+ ...++++. +.+.|+ ||+++..+++
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH-ALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHH-HTTCTT-CCEEEEEESC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHH-HHhccC-CCEEEEECCC
Confidence 999999842210 110 0 00 01345666 567776 8988876654
No 240
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.99 E-value=2.6e-09 Score=92.37 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=82.3
Q ss_pred CCCeEEEEecCc--hHHHHHHHh-cCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH---hcC--C
Q 025534 102 NPKTIFIMGGGE--GSTAREILR-HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL---ESR--K 173 (251)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l---~~~--~ 173 (251)
..++|||||||. +....++++ ..+..+|++||.||.|++.||+.+... ...+++++++|+++.- ... .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 457999999997 334454443 334579999999999999999887532 1247999999998752 111 2
Q ss_pred Ccee-----EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHH
Q 025534 174 ESYD-----VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (251)
Q Consensus 174 ~~fD-----~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~ 239 (251)
+.|| .|+++..-++. +. .-.-...++. +.+.|+|||.|++....+. ..++....+.+.++
T Consensus 154 ~~~D~~~p~av~~~avLH~l--~d-~~~p~~~l~~-l~~~L~PGG~Lvls~~~~d--~~p~~~~~~~~~~~ 218 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFV--LD-EDDAVGIVRR-LLEPLPSGSYLAMSIGTAE--FAPQEVGRVAREYA 218 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGS--CG-GGCHHHHHHH-HHTTSCTTCEEEEEEECCT--TSHHHHHHHHHHHH
T ss_pred cccCcCCcchHHhhhhHhcC--Cc-hhhHHHHHHH-HHHhCCCCcEEEEEeccCC--CCHHHHHHHHHHHH
Confidence 4455 46666654441 10 0001468888 7999999999998764331 22333444444444
No 241
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.97 E-value=3.2e-10 Score=103.21 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=73.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++. + .+|+++|+++.+++.|++. ... ....++..+..+.+...+++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~-g-~~v~gvD~s~~~~~~a~~~-~~~------~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA-G-VRHLGFEPSSGVAAKAREK-GIR------VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT-T-CEEEEECCCHHHHHHHHTT-TCC------EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C-CcEEEECCCHHHHHHHHHc-CCC------cceeeechhhHhhcccCCCCEEEEE
Confidence 35679999999999999999886 3 4999999999999999986 111 1112222232333333357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-.+. + .-.++++. ++++|+|||++++..
T Consensus 177 ~~~vl~h~--~----d~~~~l~~-~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCHI--P----YVQSVLEG-VDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGGC--T----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECChHHhc--C----CHHHHHHH-HHHHcCCCeEEEEEe
Confidence 97542221 1 13578999 799999999999864
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.97 E-value=1.7e-09 Score=96.38 Aligned_cols=104 Identities=20% Similarity=0.152 Sum_probs=74.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++..+|||||||+|..+..+++..+..+++++|+ +.++. ++.....+ ..++++++.+|+++ ..+ .||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCCC---CCC-CCcEEE
Confidence 4568999999999999999988655568999999 55555 44433221 24689999999863 223 899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+.. .. .....+++. +++.|||||.+++..
T Consensus 253 ~~~vlh~~-~d---~~~~~~L~~-~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNW-GD---EDSVRILTN-CRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGS-CH---HHHHHHHHH-HHHTCCTTCEEEEEE
T ss_pred EehhccCC-CH---HHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87542210 11 011478898 799999999998753
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=5.8e-10 Score=95.84 Aligned_cols=80 Identities=13% Similarity=0.107 Sum_probs=65.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECCh-------HHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCC-
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE-------EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK- 173 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~- 173 (251)
.+.+|||+|||+|..+..+++. + .+|+++|+++ .+++.|+++...++ ...+++++++|+.+++....
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~---~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-G-LTVTAFEQHPAVACLLSDGIRRALLNPETQD---TAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-T-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHH---HHTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh-C-CEEEEEECChhhhHHHHHHHHHHHhHHHhhC---CccCeEEEECCHHHHHHhhhc
Confidence 4578999999999999999986 3 5899999999 99999998876543 12469999999999875322
Q ss_pred --CceeEEEEcCCCC
Q 025534 174 --ESYDVIIGDLADP 186 (251)
Q Consensus 174 --~~fD~Ii~D~~~~ 186 (251)
++||+|++|++.+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999998644
No 244
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.96 E-value=2.2e-09 Score=97.30 Aligned_cols=112 Identities=12% Similarity=-0.026 Sum_probs=80.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC--------------------------------------cEEEEEECChHHHHHH
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV--------------------------------------EKVVMCDIDEEVVEFC 142 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~a 142 (251)
.....+||.+||+|+++.+++..... .+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 34578999999999999888764211 3599999999999999
Q ss_pred HhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCC--CcEEEEecC
Q 025534 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQAG 220 (251)
Q Consensus 143 ~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~p--gG~l~~~~~ 220 (251)
+++....+ ...+++++++|+.++.. .++||+|++|||.....+. .-...++|+. +.+.|++ ||.+.+-+.
T Consensus 273 r~Na~~~g---l~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVG---LEDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLD--DKAVDILYNE-MGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTT---CTTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSC--HHHHHHHHHH-HHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcC---CCCceEEEECChHHCCc--cCCcCEEEECCchhhccCC--HHHHHHHHHH-HHHHHhhCCCcEEEEEEC
Confidence 99987553 23579999999988632 3589999999985432111 1112456666 4555554 888777654
No 245
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=5.4e-09 Score=95.00 Aligned_cols=112 Identities=11% Similarity=0.047 Sum_probs=78.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC--------------------------------------cEEEEEECChHHHHHH
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV--------------------------------------EKVVMCDIDEEVVEFC 142 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~a 142 (251)
.....|||++||+|.++.+++..... .+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 34578999999999999888764211 3699999999999999
Q ss_pred HhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCC--CcEEEEecC
Q 025534 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQAG 220 (251)
Q Consensus 143 ~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~p--gG~l~~~~~ 220 (251)
+++....+ ...+++++++|+.++. ..++||+|++|||.....+. .-...++|+. +.+.|++ ||.+.+-++
T Consensus 280 r~Na~~~g---l~~~I~~~~~D~~~~~--~~~~fD~Iv~NPPYg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 280 KQNAVEAG---LGDLITFRQLQVADFQ--TEDEYGVVVANPPYGERLED--EEAVRQLYRE-MGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHTT---CTTCSEEEECCGGGCC--CCCCSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHcC---CCCceEEEECChHhCC--CCCCCCEEEECCCCccccCC--chhHHHHHHH-HHHHHhcCCCCEEEEEEC
Confidence 99987553 2357999999998853 24689999999985321110 0112345665 4444544 887776554
No 246
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.95 E-value=1e-09 Score=100.10 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=66.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii 180 (251)
.+.+|||+|||+|..+..+++. . .+|++||+|+.+++.|++++..+... -.+++++++|+.+++... .++||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g-~~V~~VD~s~~~l~~Ar~N~~~~~~g--l~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-A-SQGIYIERNDETAVAARHNIPLLLNE--GKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHHHHHSCT--TCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc-C-CEEEEEECCHHHHHHHHHhHHHhccC--CCcEEEEECcHHHhhhhccCCCceEEE
Confidence 3689999999999999988875 3 69999999999999999998754101 158999999999887542 35899999
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
+||+.
T Consensus 169 lDPPr 173 (410)
T 3ll7_A 169 VDPAR 173 (410)
T ss_dssp ECCEE
T ss_pred ECCCC
Confidence 99974
No 247
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.95 E-value=2.1e-09 Score=102.12 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=65.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~I 179 (251)
.++.||||||||+|.++..+++. + ++||+||+++.+|+.|+.+....+ ..++++.++|+.+.... .+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-g-a~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-G-ATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-C-CEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhccCCCccEE
Confidence 46789999999999999999997 4 589999999999999999976442 24699999999988654 35789999
Q ss_pred EEcC
Q 025534 180 IGDL 183 (251)
Q Consensus 180 i~D~ 183 (251)
++--
T Consensus 139 ~~~e 142 (569)
T 4azs_A 139 IGLS 142 (569)
T ss_dssp EEES
T ss_pred EECc
Confidence 9864
No 248
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.93 E-value=1e-09 Score=92.82 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=67.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh--cCCC-cee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKE-SYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~--~~~~-~fD 177 (251)
+.+++|||||||+|.++..+++. +..+|++||+++.+++.+++.. +++......-..++. .... .||
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d 105 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD---------ERVVVMEQFNFRNAVLADFEQGRPS 105 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC---------TTEEEECSCCGGGCCGGGCCSCCCS
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC---------ccccccccceEEEeCHhHcCcCCCC
Confidence 45679999999999999999987 4469999999999999988753 233222111111211 1122 378
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
.+.+|..-.. + ..+++. ++++|||||.+++.
T Consensus 106 ~~~~D~v~~~-------l--~~~l~~-i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 106 FTSIDVSFIS-------L--DLILPP-LYEILEKNGEVAAL 136 (232)
T ss_dssp EEEECCSSSC-------G--GGTHHH-HHHHSCTTCEEEEE
T ss_pred EEEEEEEhhh-------H--HHHHHH-HHHhccCCCEEEEE
Confidence 7777753211 1 457888 79999999998875
No 249
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.92 E-value=2.3e-09 Score=93.20 Aligned_cols=77 Identities=18% Similarity=0.361 Sum_probs=62.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++...+ ..++++++.+|+.++ .-..||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~D~~~~---~~~~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTP---VASKLQVLVGDVLKT---DLPFFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEESCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEEcceecc---cchhhcEEE
Confidence 356799999999999999999873 589999999999999999875321 125899999998764 124799999
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
++++.
T Consensus 99 ~nlpy 103 (285)
T 1zq9_A 99 ANLPY 103 (285)
T ss_dssp EECCG
T ss_pred EecCc
Confidence 99764
No 250
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.91 E-value=1.4e-09 Score=98.53 Aligned_cols=111 Identities=16% Similarity=0.123 Sum_probs=78.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC--------------------------------------CcEEEEEECChHHHHHHH
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFCK 143 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a~ 143 (251)
...+|||++||+|.++.+++.... ..+|+++|+|+.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 457899999999999988876411 147999999999999999
Q ss_pred hchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCC--CcEEEEecC
Q 025534 144 SYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQAG 220 (251)
Q Consensus 144 ~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~p--gG~l~~~~~ 220 (251)
++...++ ...++++.++|+.++. .+++||+|++|||.....+. .-...++|+. +.+.|++ ||.+.+-+.
T Consensus 275 ~Na~~~g---l~~~i~~~~~D~~~l~--~~~~~D~Iv~NPPyg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 275 ENAEIAG---VDEYIEFNVGDATQFK--SEDEFGFIITNPPYGERLED--KDSVKQLYKE-LGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHT---CGGGEEEEECCGGGCC--CSCBSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTSBSCEEEEEES
T ss_pred HHHHHcC---CCCceEEEECChhhcC--cCCCCcEEEECCCCcCccCC--HHHHHHHHHH-HHHHHhhCCCCEEEEEEC
Confidence 9987553 2347999999998863 24689999999984321110 0112356665 4555554 777766553
No 251
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.90 E-value=2.5e-09 Score=92.71 Aligned_cols=112 Identities=17% Similarity=0.181 Sum_probs=74.0
Q ss_pred CCCeEEEEecCchH----HHHHHHhc-CC---CcEEEEEECChHHHHHHHhchh-c------------------cc--CC
Q 025534 102 NPKTIFIMGGGEGS----TAREILRH-KT---VEKVVMCDIDEEVVEFCKSYLV-V------------------NK--EA 152 (251)
Q Consensus 102 ~~~~VL~iG~G~G~----~~~~l~~~-~~---~~~v~~VEid~~vi~~a~~~~~-~------------------~~--~~ 152 (251)
++.+||++|||+|. ++..+++. +. ..+|+++|+|+++++.|++..- . .. ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55555554 21 2489999999999999998631 0 00 00
Q ss_pred -C-----CCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 153 -F-----SDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 153 -~-----~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+ ...++++...|..+. .-. .++||+|+|-..-... .+ -.....++. +.+.|+|||.|++-.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-~~~~~~~fDlI~crnvliyf-~~---~~~~~vl~~-~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-QYNVPGPFDAIFCRNVMIYF-DK---TTQEDILRR-FVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-SCCCCCCEEEEEECSSGGGS-CH---HHHHHHHHH-HGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCC-CCCcCCCeeEEEECCchHhC-CH---HHHHHHHHH-HHHHhCCCcEEEEEe
Confidence 0 013789999998762 111 3689999995321100 11 112567888 799999999999854
No 252
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.89 E-value=2.2e-09 Score=96.49 Aligned_cols=98 Identities=20% Similarity=0.184 Sum_probs=74.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.+.+|||||||+|..+..+++..+..+++++|+ +.+++.++++ ++++++.+|+++. .+. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VPQ-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CCC-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CCC-CCEEE
Confidence 3568999999999999999998755568999999 9999877652 5799999998762 223 99999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+...-+. -+. .....+++. +++.|+|||.+++.
T Consensus 273 ~~~~lh~--~~d--~~~~~~l~~-~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 273 LKAVCHN--WSD--EKCIEFLSN-CHKALSPNGKVIIV 305 (372)
T ss_dssp EESSGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Eeccccc--CCH--HHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8754221 110 011378898 79999999988875
No 253
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.88 E-value=4.4e-09 Score=94.06 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=78.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
..++|||||||+|.++..+++..+..++++.|+ |.+++.|++++... ..+|++++.+|+++ .....+|+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~~~~~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---DPLPEADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---SCCCCCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---CCCCCceEEEe
Confidence 457999999999999999998766678999998 89999999987643 24799999999754 33456899998
Q ss_pred cCC-CCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~-~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
-.. +.|. .+ ....+++. +++.|+|||.+++..
T Consensus 251 ~~vlh~~~-d~----~~~~iL~~-~~~al~pgg~lli~e 283 (353)
T 4a6d_A 251 ARVLHDWA-DG----KCSHLLER-IYHTCKPGGGILVIE 283 (353)
T ss_dssp ESSGGGSC-HH----HHHHHHHH-HHHHCCTTCEEEEEE
T ss_pred eeecccCC-HH----HHHHHHHH-HHhhCCCCCEEEEEE
Confidence 643 2221 10 12467888 699999999887653
No 254
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.87 E-value=4.5e-09 Score=91.72 Aligned_cols=119 Identities=18% Similarity=0.302 Sum_probs=75.7
Q ss_pred CCCCeEEEEecCc------hHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEE-EEcchHHHHhcC
Q 025534 101 PNPKTIFIMGGGE------GSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELESR 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~------G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~-~~~D~~~~l~~~ 172 (251)
.++.+|||||||+ |+ ..+++. +...+|++||+++. + +++++ +++|+.+.. .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~v~~~i~gD~~~~~--~ 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SDADSTLIGDCATVH--T 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CSSSEEEESCGGGCC--C
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CCCEEEEECccccCC--c
Confidence 4567999999944 76 333333 32469999999998 1 25788 999987642 2
Q ss_pred CCceeEEEEcCCCCCC-----CCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh-CCcee
Q 025534 173 KESYDVIIGDLADPIE-----GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGY 246 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~-----~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~-F~~v~ 246 (251)
.++||+|++|...+.. .......+-.+.++. +.+.|||||.|++..... .. ...+.+.+++. |..+.
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~-a~r~LkpGG~~v~~~~~~---~~---~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKITEH---SW---NADLYKLMGHFSWWTAF 193 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEECSS---SC---CHHHHHHHTTEEEEEEE
T ss_pred cCcccEEEEcCCccccccccccccchHHHHHHHHHH-HHHhcCCCcEEEEEEecc---CC---HHHHHHHHHHcCCcEEE
Confidence 3689999999753321 000001112467888 799999999999854221 11 23566667766 65554
Q ss_pred e
Q 025534 247 N 247 (251)
Q Consensus 247 ~ 247 (251)
.
T Consensus 194 ~ 194 (290)
T 2xyq_A 194 V 194 (290)
T ss_dssp E
T ss_pred E
Confidence 3
No 255
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.87 E-value=3.8e-09 Score=94.16 Aligned_cols=98 Identities=19% Similarity=0.118 Sum_probs=73.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
.+.+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|+.+. .+ .||+|++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~p-~~D~v~~ 252 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---IP-NADAVLL 252 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---CC-CCSEEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---CC-CccEEEe
Confidence 468999999999999999998654568999999 9999887752 4599999998652 22 4999998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCC---CcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~p---gG~l~~~~ 219 (251)
...-+.. .. .....+++. +++.|+| ||.+++..
T Consensus 253 ~~~lh~~-~d---~~~~~~l~~-~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 253 KYILHNW-TD---KDCLRILKK-CKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp ESCGGGS-CH---HHHHHHHHH-HHHHHSGGGCCCEEEEEE
T ss_pred ehhhccC-CH---HHHHHHHHH-HHHhCCCCCCCcEEEEEE
Confidence 7542210 11 012378898 7999999 99887653
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.87 E-value=9.3e-09 Score=90.23 Aligned_cols=79 Identities=28% Similarity=0.313 Sum_probs=64.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH---hcCC-Cce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL---ESRK-ESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l---~~~~-~~f 176 (251)
.++.+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++...+ ++++++++|+.++- ...+ .+|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-----~~v~~v~~d~~~l~~~l~~~g~~~~ 99 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-----DRVSLFKVSYREADFLLKTLGIEKV 99 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-----TTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCHHHHHHHHHhcCCCCC
Confidence 35679999999999999999987444699999999999999999876542 58999999987652 2212 589
Q ss_pred eEEEEcCC
Q 025534 177 DVIIGDLA 184 (251)
Q Consensus 177 D~Ii~D~~ 184 (251)
|.|++|++
T Consensus 100 D~Vl~D~g 107 (301)
T 1m6y_A 100 DGILMDLG 107 (301)
T ss_dssp EEEEEECS
T ss_pred CEEEEcCc
Confidence 99999985
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.86 E-value=2.7e-09 Score=95.93 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=73.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
...+|||||||+|..+..+++..+..+++++|+ |.+++.+++ .++++++.+|+++.+ ++. |+|++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~~---p~~-D~v~~ 267 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDGV---PKG-DAIFI 267 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTCC---CCC-SEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCCC---CCC-CEEEE
Confidence 458999999999999999988655578999999 999887664 268999999987622 233 99998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-+.. .. -....+++. +++.|+|||.+++..
T Consensus 268 ~~vlh~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 268 KWICHDW-SD---EHCLKLLKN-CYAALPDHGKVIVAE 300 (368)
T ss_dssp ESCGGGB-CH---HHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred echhhcC-CH---HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 7542210 11 012367888 799999999887753
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.86 E-value=6.1e-09 Score=89.30 Aligned_cols=75 Identities=20% Similarity=0.388 Sum_probs=61.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH-HhcC--CCcee
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR--KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~-l~~~--~~~fD 177 (251)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++++|+.++ +... +++||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE
Confidence 356789999999999999999863 6999999999999999998753 36899999999876 2222 35788
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
|+.|+|
T Consensus 100 -vv~NlP 105 (255)
T 3tqs_A 100 -VVGNLP 105 (255)
T ss_dssp -EEEECC
T ss_pred -EEecCC
Confidence 888876
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.86 E-value=4.6e-09 Score=91.89 Aligned_cols=76 Identities=17% Similarity=0.327 Sum_probs=63.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.+..+|||||||+|.++..+++. ..+|++||+|+.+++.+++++.. .++++++++|+.++- -....||+|+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~-~~~~~fD~Iv 119 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD-LNKLDFNKVV 119 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC-GGGSCCSEEE
T ss_pred CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC-cccCCccEEE
Confidence 35679999999999999999987 36999999999999999998762 368999999988642 1234799999
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
.+++.
T Consensus 120 ~NlPy 124 (295)
T 3gru_A 120 ANLPY 124 (295)
T ss_dssp EECCG
T ss_pred EeCcc
Confidence 99763
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.85 E-value=7.3e-09 Score=89.58 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=61.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
+. +|||||||+|.++..+++.. .+|++||+|+++++.+++++. ..+++++++|+.++--.....+|.|+.
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~~~~~~~iv~ 116 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEEVPQGSLLVA 116 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGGSCTTEEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhhccCccEEEe
Confidence 45 99999999999999999863 689999999999999998864 258999999998762221236899999
Q ss_pred cCCCC
Q 025534 182 DLADP 186 (251)
Q Consensus 182 D~~~~ 186 (251)
|+|..
T Consensus 117 NlPy~ 121 (271)
T 3fut_A 117 NLPYH 121 (271)
T ss_dssp EECSS
T ss_pred cCccc
Confidence 98643
No 261
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.85 E-value=1.7e-09 Score=92.70 Aligned_cols=104 Identities=21% Similarity=0.140 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.+.+|||||||.|-++..+....+..+++++|+|+.+++++++++..++ .+.++...|...- ..+++||+|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-----~~~~~~v~D~~~~--~p~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-----VPHRTNVADLLED--RLDEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-----CCEEEEECCTTTS--CCCSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEeeeccc--CCCCCcchHH
Confidence 56899999999999999988877667899999999999999999988653 4588999995432 3468999999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+...-|.. +.--....| . +.+.|+++|+++-
T Consensus 204 ~lkti~~L----e~q~kg~g~-~-ll~aL~~~~vvVS 234 (281)
T 3lcv_B 204 LLKTLPCL----ETQQRGSGW-E-VIDIVNSPNIVVT 234 (281)
T ss_dssp ETTCHHHH----HHHSTTHHH-H-HHHHSSCSEEEEE
T ss_pred HHHHHHHh----hhhhhHHHH-H-HHHHhCCCCEEEe
Confidence 88652210 000011345 4 5688999998874
No 262
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.83 E-value=4.1e-09 Score=94.64 Aligned_cols=98 Identities=21% Similarity=0.145 Sum_probs=73.4
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
...+|||||||+|..+..+++..+..+++++|+ |.+++.+++ .++++++.+|+++. . ++. |+|++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~--~-p~~-D~v~~ 265 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE--V-PSG-DTILM 265 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC--C-CCC-SEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC--C-CCC-CEEEe
Confidence 458999999999999999988655578999999 988887664 26899999998762 2 233 99998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-+.. .. -....+++. +++.|+|||.+++..
T Consensus 266 ~~vlh~~-~d---~~~~~~L~~-~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 266 KWILHDW-SD---QHCATLLKN-CYDALPAHGKVVLVQ 298 (364)
T ss_dssp ESCGGGS-CH---HHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred hHHhccC-CH---HHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 7542210 10 012467888 799999999888753
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.82 E-value=4e-09 Score=97.20 Aligned_cols=113 Identities=14% Similarity=0.056 Sum_probs=80.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcC-------------CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK-------------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~ 168 (251)
...+|||+|||+|+++..+.++- ...+++++|+|+.++++|+.++...+. ...+++++++|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~--~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI--GTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC--CSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC--CcCCCCEeeCCCCCC
Confidence 35689999999999988877641 125799999999999999998765531 112678999997654
Q ss_pred HhcCCCceeEEEEcCCCCCCCCcccC-----C------ccHHHHHHHHcccCCCCcEEEEec
Q 025534 169 LESRKESYDVIIGDLADPIEGGPCYK-----L------YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 169 l~~~~~~fD~Ii~D~~~~~~~~p~~~-----l------~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
. ..++||+|++|||.......... + ....|++. +.++|+|||++++-.
T Consensus 249 ~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 E--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQH-MMLMLKTGGRAAVVL 307 (445)
T ss_dssp C--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred c--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHH-HHHHhccCCEEEEEE
Confidence 2 23589999999873221010000 0 12478898 689999999887654
No 264
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.81 E-value=6.1e-09 Score=89.44 Aligned_cols=82 Identities=17% Similarity=0.116 Sum_probs=64.7
Q ss_pred CeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhccc--CCCCC---CCeEEEEcchHHHHhcCCCceeE
Q 025534 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSD---PRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~---~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.+|||+|||.|..+..+++. + .+|++||+++.+.+++++.+.... ...+. .+++++++|+.++++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-G-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-T-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 79999999999999999987 3 479999999999888877654211 00111 47999999999998765567999
Q ss_pred EEEcCCCCC
Q 025534 179 IIGDLADPI 187 (251)
Q Consensus 179 Ii~D~~~~~ 187 (251)
|++||+.+.
T Consensus 168 V~lDP~y~~ 176 (258)
T 2oyr_A 168 VYLDPMFPH 176 (258)
T ss_dssp EEECCCCCC
T ss_pred EEEcCCCCC
Confidence 999997554
No 265
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.81 E-value=3.8e-09 Score=87.01 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=64.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+. .+++++|+++. +++++.+|+.+ +...+++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQ-VPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTS-CSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEecccc-CCCCCCCEeEEE
Confidence 456899999999999988762 58999999987 34567778765 223357899999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+...-+. .....+++. +.++|+|||.+++..
T Consensus 121 ~~~~l~~-------~~~~~~l~~-~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 121 FCLSLMG-------TNIRDFLEE-ANRVLKPGGLLKVAE 151 (215)
T ss_dssp EESCCCS-------SCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eehhccc-------cCHHHHHHH-HHHhCCCCeEEEEEE
Confidence 8754332 113578888 799999999988754
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.81 E-value=2.1e-08 Score=85.17 Aligned_cols=76 Identities=21% Similarity=0.341 Sum_probs=60.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++-......| .|+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~~-~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPKNQSY-KIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCSSCCC-EEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCcccCCCe-EEE
Confidence 356799999999999999999874 6899999999999999998652 2589999999877522112345 577
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
+|++.
T Consensus 100 ~nlPy 104 (244)
T 1qam_A 100 GNIPY 104 (244)
T ss_dssp EECCG
T ss_pred EeCCc
Confidence 77753
No 267
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.79 E-value=1.7e-08 Score=87.25 Aligned_cols=122 Identities=12% Similarity=0.130 Sum_probs=92.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD~ 178 (251)
++.++|++-+|+|.++.++++ .. .+++.||.+++.++..++++.. .++++++..|+..++.. ..++||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~-d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQ-DRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TT-SEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcC-CC-CeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 467799999999999999998 33 7999999999999999999863 36899999999998864 3457999
Q ss_pred EEEcCCCCCCCCcccCCcc--HHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhC
Q 025534 179 IIGDLADPIEGGPCYKLYT--KSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~--~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F 242 (251)
|++|||... . ..+. .+.+.+ ...+.|+|+++++. | ....+....+.+.|++.-
T Consensus 163 VfiDPPYe~---k--~~~~~vl~~L~~--~~~r~~~Gi~v~WY--P--i~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 163 IFIDPSYER---K--EEYKEIPYAIKN--AYSKFSTGLYCVWY--P--VVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp EEECCCCCS---T--THHHHHHHHHHH--HHHHCTTSEEEEEE--E--ESSHHHHHHHHHHHHHHC
T ss_pred EEECCCCCC---C--cHHHHHHHHHHH--hCccCCCeEEEEEE--e--ccchHHHHHHHHHHHhcC
Confidence 999997431 0 1111 122332 34688999999986 3 345666778888887543
No 268
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.76 E-value=7.2e-09 Score=87.85 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++..+ .++.++...|...- ..+++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~--~~~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA--PPAEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS--CCCCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC--CCCCCcchHH
Confidence 568999999999999998776 4579999999999999999997754 36789999996543 2457999998
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+...-|.. +.......+ . +.+.|+++|+++-
T Consensus 174 llk~lh~L----E~q~~~~~~-~-ll~aL~~~~vvVs 204 (253)
T 3frh_A 174 IFKLLPLL----EREQAGSAM-A-LLQSLNTPRMAVS 204 (253)
T ss_dssp EESCHHHH----HHHSTTHHH-H-HHHHCBCSEEEEE
T ss_pred HHHHHHHh----hhhchhhHH-H-HHHHhcCCCEEEE
Confidence 87542110 011112344 3 4568999998774
No 269
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.75 E-value=6.9e-09 Score=90.84 Aligned_cols=76 Identities=21% Similarity=0.312 Sum_probs=59.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.+++++...+ .++++++.+|+.++- ..+||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~~---~~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKTV---FPKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSSC---CCCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhCC---cccCCEEE
Confidence 45679999999999999999886 3699999999999999999876432 268999999987642 35899999
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
+|++.
T Consensus 112 ~n~py 116 (299)
T 2h1r_A 112 ANIPY 116 (299)
T ss_dssp EECCG
T ss_pred EcCCc
Confidence 99874
No 270
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.73 E-value=8.3e-09 Score=97.49 Aligned_cols=115 Identities=10% Similarity=0.008 Sum_probs=78.9
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCC---------------CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKT---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~ 165 (251)
+.+.+|||.+||+|+++..++++-. ..++.++|+|+.++++|+.++.+.+ .+.++.+.++|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g---i~~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG---IDFNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT---CCCBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC---CCcccceeccch
Confidence 4456999999999998877654210 2479999999999999999877654 123455588886
Q ss_pred HHHHhcCCCceeEEEEcCCCCC---CC--------------------CcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 166 RAELESRKESYDVIIGDLADPI---EG--------------------GPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 166 ~~~l~~~~~~fD~Ii~D~~~~~---~~--------------------~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...-.....+||+|++|||... .. .|...-....|++. +.+.|+|||++++-.
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH-MLYHLAPTGSMALLL 395 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH-HHHHhccCceEEEEe
Confidence 5432222468999999998432 10 01011112368888 689999999877654
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.70 E-value=9.9e-08 Score=81.36 Aligned_cols=75 Identities=31% Similarity=0.467 Sum_probs=59.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH-hcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l-~~~~~~fD~I 179 (251)
.++.+|||||||+|.++..+++. +..+|++||+|+.+++.++++ . .++++++++|+.++- ....+.| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 35679999999999999999987 347999999999999999987 2 258999999987752 2211234 78
Q ss_pred EEcCCC
Q 025534 180 IGDLAD 185 (251)
Q Consensus 180 i~D~~~ 185 (251)
+.|+|.
T Consensus 100 v~NlPy 105 (249)
T 3ftd_A 100 VGNLPY 105 (249)
T ss_dssp EEECCT
T ss_pred EEECch
Confidence 888764
No 272
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.69 E-value=5.8e-08 Score=91.61 Aligned_cols=115 Identities=11% Similarity=0.058 Sum_probs=81.8
Q ss_pred CCCeEEEEecCchHHHHHHHhc---CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH--HhcCCCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~--l~~~~~~f 176 (251)
...+|||.+||+|+++..++++ .+..++.++|+|+.++++|+.++.+++. ..+++++.++|.+.. -.....+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV--PIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC--CcCccceEecceecccccccccccc
Confidence 4579999999999988877765 2346899999999999999998765531 225789999997653 11234789
Q ss_pred eEEEEcCCCC--CCCC------c---------ccCCccHHHHHHHHcccCC-CCcEEEEec
Q 025534 177 DVIIGDLADP--IEGG------P---------CYKLYTKSFYEFVVKPRLN-PEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~--~~~~------p---------~~~l~~~ef~~~~~~~~L~-pgG~l~~~~ 219 (251)
|+|+.|||.. +... + ...-....|++. +.+.|+ |||++++-.
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~-~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLH-GYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHH-HHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHH-HHHHhCCCceeEEEEe
Confidence 9999999842 1100 0 000112358888 689999 999887654
No 273
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.69 E-value=1.4e-08 Score=90.64 Aligned_cols=97 Identities=16% Similarity=0.110 Sum_probs=72.7
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
...+|||||||+|.++..+++..+..+++++|+ +.+++.++++ ++++++.+|+++ . .+ .||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~--~-~~-~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN----------ENLNFVGGDMFK--S-IP-SADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC----------SSEEEEECCTTT--C-CC-CCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC----------CCcEEEeCccCC--C-CC-CceEEEE
Confidence 458999999999999999998755568999999 7888766641 469999999876 2 22 5999998
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCC---CcEEEEe
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQ 218 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~p---gG~l~~~ 218 (251)
...-+.. .. .....+++. +++.|+| ||.+++.
T Consensus 258 ~~vlh~~-~d---~~~~~~l~~-~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 258 KWVLHDW-ND---EQSLKILKN-SKEAISHKGKDGKVIII 292 (358)
T ss_dssp ESCGGGS-CH---HHHHHHHHH-HHHHTGGGGGGCEEEEE
T ss_pred cccccCC-CH---HHHHHHHHH-HHHhCCCCCCCcEEEEE
Confidence 7542211 11 012378888 7999999 9988764
No 274
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.68 E-value=1.6e-07 Score=82.21 Aligned_cols=112 Identities=21% Similarity=0.316 Sum_probs=73.7
Q ss_pred CCeEEEEecCchHHHHHHH----hcCCCcEE--EEEECChH---------HHHHHHhchhcccCCCCCC--CeEEEEcch
Q 025534 103 PKTIFIMGGGEGSTAREIL----RHKTVEKV--VMCDIDEE---------VVEFCKSYLVVNKEAFSDP--RLELVINDA 165 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~----~~~~~~~v--~~VEid~~---------vi~~a~~~~~~~~~~~~~~--rv~~~~~D~ 165 (251)
.-+||++|.|+|......+ +..+..++ +.+|.++- .-++.+..+... ..+... .++++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~-p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERV-PEYEGERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHC-SEEECSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhC-ccccCCcEEEEEEechH
Confidence 3579999999998543322 22333444 55564321 111122111100 001223 456899999
Q ss_pred HHHHhcCC-CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 166 RAELESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 166 ~~~l~~~~-~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++.+.+.. .++|+|+.|+|.|.. +| .+++.++|+. +.++++|||++++.+
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~k-NP--eLWs~e~f~~-l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYK-NP--ELWTLDFLSL-IKERIDEKGYWVSYS 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTT-SG--GGGSHHHHHH-HHTTEEEEEEEEESC
T ss_pred HHHHhhhcccceeEEEeCCCCccc-Cc--ccCCHHHHHH-HHHHhCCCcEEEEEe
Confidence 99998754 489999999998863 44 6999999999 899999999999865
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.67 E-value=2.5e-08 Score=94.10 Aligned_cols=115 Identities=8% Similarity=-0.007 Sum_probs=80.1
Q ss_pred CCCeEEEEecCchHHHHHHHhcC---C---------------CcEEEEEECChHHHHHHHhchhcccCCCCC---CCeEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK---T---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSD---PRLEL 160 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~---~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~---~rv~~ 160 (251)
...+|||.+||+|+++..+.++- . ..+++++|+|+.++++|+.++.+.+. .. .+.++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi--~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI--EGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC--CCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC--CccccccCCe
Confidence 35689999999999987776531 1 13799999999999999998765431 11 13789
Q ss_pred EEcchHHHHhcCCCceeEEEEcCCCCCCCCc--------ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 161 VINDARAELESRKESYDVIIGDLADPIEGGP--------CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 161 ~~~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p--------~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+++|.........++||+|+.|||....... ...-....|++. +.+.|+|||++++-.
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH-IIETLHPGGRAAVVV 312 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH-HHHHhCCCCEEEEEe
Confidence 9999876533234689999999974221000 000112468888 689999999887654
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.66 E-value=3.6e-08 Score=95.78 Aligned_cols=113 Identities=8% Similarity=-0.015 Sum_probs=77.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC------------------------------------------CCcEEEEEECChHH
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK------------------------------------------TVEKVVMCDIDEEV 138 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~v 138 (251)
.....|||.+||+|+++.+++... ...+|+++|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 345789999999999998877531 11479999999999
Q ss_pred HHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHc---ccCCCCcE
Q 025534 139 VEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVK---PRLNPEGI 214 (251)
Q Consensus 139 i~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~---~~L~pgG~ 214 (251)
++.|+++....+ ....+++.++|+.++.... .++||+|++|||.....+. .-...++|+. +. +.+.|||.
T Consensus 269 v~~A~~N~~~ag---v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~--~~~l~~ly~~-l~~~lk~~~~g~~ 342 (703)
T 3v97_A 269 IQRARTNARLAG---IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDS--EPALIALHSL-LGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHTT---CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---C--CHHHHHHHHH-HHHHHHHHCTTCE
T ss_pred HHHHHHHHHHcC---CCCceEEEECChhhCccccccCCCCEEEeCCCccccccc--hhHHHHHHHH-HHHHHHhhCCCCe
Confidence 999999987553 2356999999998853221 2389999999985332111 1112345554 33 44557998
Q ss_pred EEEec
Q 025534 215 FVTQA 219 (251)
Q Consensus 215 l~~~~ 219 (251)
+.+-+
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87654
No 277
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.65 E-value=6.5e-07 Score=80.28 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=93.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhccc--CCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+|||+++|.|+=+.+++.......|+++|+++.=++..++++...+ ......++++...|++.+-....++||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 34579999999999988888876555689999999999998888765321 1112357999999999886656689999
Q ss_pred EEEcCCCCCC------CCcc-cCC-----------ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHH
Q 025534 179 IIGDLADPIE------GGPC-YKL-----------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (251)
Q Consensus 179 Ii~D~~~~~~------~~p~-~~l-----------~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~ 239 (251)
|++|+|.... ..|. ... ...+.+.. +.+.|||||+|+--+++....-+......+++...
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~-a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~ 304 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAA-GLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLA 304 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHH-HHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCC
Confidence 9999984321 1111 011 12456666 57899999999876665421223334444544433
No 278
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.63 E-value=2.4e-08 Score=79.82 Aligned_cols=88 Identities=11% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~ 178 (251)
.++.+||+||||. | .+|+++.|++.|++.++ .+++++.+|+.+.... .+++||+
T Consensus 11 ~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEeE
Confidence 4678999999985 1 39999999999998753 2489999998875321 4578999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|++...-++. .+ ...+++++ ++++|||||.+++.
T Consensus 67 V~~~~~l~~~-~~----~~~~~l~~-~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 67 ILSGLVPGST-TL----HSAEILAE-IARILRPGGCLFLK 100 (176)
T ss_dssp EEECCSTTCC-CC----CCHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEECChhhhc-cc----CHHHHHHH-HHHHCCCCEEEEEE
Confidence 9996543331 01 12688999 79999999999885
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=4.7e-08 Score=95.14 Aligned_cols=137 Identities=11% Similarity=0.036 Sum_probs=84.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCC---CcEEEEEECChHHHHHH--HhchhcccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKT---VEKVVMCDIDEEVVEFC--KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 176 (251)
.+.+|||.|||+|+++..++++.+ ..+++++|+|+.+++.| +.++..+.-....+...+..+|....-....++|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999887532 35799999999999999 5544332110112234666777655211124689
Q ss_pred eEEEEcCCCCC-CCCccc-----------------C-----CccHHHHHHHHcccCCCCcEEEEecCCCCCCC--ChHHH
Q 025534 177 DVIIGDLADPI-EGGPCY-----------------K-----LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVF 231 (251)
Q Consensus 177 D~Ii~D~~~~~-~~~p~~-----------------~-----l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~--~~~~~ 231 (251)
|+|++|||... ...+.. . -....|++. +.+.|+|||++++-.... +. .....
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~-Al~lLKpGGrLAfIlP~s--~Lf~sg~~~ 477 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLEL-VTELVQDGTVISAIMPKQ--YLTAQGNES 477 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHH-HHHHSCTTCEEEEEEETH--HHHCCSHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHH-HHHhcCCCcEEEEEEChH--HhccCChHH
Confidence 99999998421 000000 0 012457888 689999999988754221 22 12234
Q ss_pred HHHHHHHHhh
Q 025534 232 SCIYNTLRQV 241 (251)
Q Consensus 232 ~~i~~~l~~~ 241 (251)
..+.+.|.+.
T Consensus 478 kkLRk~LLe~ 487 (878)
T 3s1s_A 478 KAFREFLVGN 487 (878)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHhC
Confidence 4555555443
No 280
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.57 E-value=7.6e-08 Score=92.05 Aligned_cols=102 Identities=16% Similarity=0.270 Sum_probs=72.2
Q ss_pred CeEEEEecCchHHHHHHHh---cCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 104 KTIFIMGGGEGSTAREILR---HKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~---~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
+.|||+|||+|-+....++ ... ..+|.+||.||. ...+++....++ -..+|+++++|.+++ +.+++.|+|
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~---~~dkVtVI~gd~eev--~LPEKVDII 432 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE---WGSQVTVVSSDMREW--VAPEKADII 432 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT---TGGGEEEEESCTTTC--CCSSCEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc---CCCeEEEEeCcceec--cCCcccCEE
Confidence 4699999999998444433 321 127899999984 556777665543 246899999999886 356899999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEE
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~ 216 (251)
|+...... .. .+. ..+.+.. ..+.|||||+++
T Consensus 433 VSEwMG~f--Ll-~E~-mlevL~A-rdr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSF--AD-NEL-SPECLDG-AQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTT--BG-GGC-HHHHHHH-HGGGEEEEEEEE
T ss_pred EEEcCccc--cc-ccC-CHHHHHH-HHHhcCCCcEEc
Confidence 99886433 11 122 1356666 589999999986
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.56 E-value=1.8e-07 Score=89.87 Aligned_cols=105 Identities=21% Similarity=0.352 Sum_probs=73.8
Q ss_pred CCeEEEEecCchHHHHHHHhc----C---------CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH
Q 025534 103 PKTIFIMGGGEGSTAREILRH----K---------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL 169 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~----~---------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l 169 (251)
.+-|||+|||+|.+...+++. . ...+|.+||.|+.++...++... ++ + ..+|+++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~-~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--W-KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--T-TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--C-CCeEEEEeCchhhcc
Confidence 356999999999996433221 1 12499999999987766555433 22 2 368999999999984
Q ss_pred h----cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEE
Q 025534 170 E----SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (251)
Q Consensus 170 ~----~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~ 216 (251)
. ...++.|+||+...... +. .. ...+.+.. +.+.|||||+++
T Consensus 486 lp~~~~~~ekVDIIVSElmGsf--l~-nE-L~pe~Ld~-v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSF--GD-NE-LSPECLDG-VTGFLKPTTISI 531 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTT--BG-GG-SHHHHHHT-TGGGSCTTCEEE
T ss_pred cccccCCCCcccEEEEeccccc--cc-hh-ccHHHHHH-HHHhCCCCcEEE
Confidence 2 11589999999976432 11 12 24678887 689999999987
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.56 E-value=3.7e-08 Score=84.68 Aligned_cols=135 Identities=11% Similarity=0.034 Sum_probs=84.4
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
....+|||||||.|+.+..+++..++.+++++++.-.+. ..+...... ..++..+.+|+ +.....+++||+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~-dv~~l~~~~~DlVl 145 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKT-DIHRLEPVKCDTLL 145 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSC-CTTTSCCCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEeccc-eehhcCCCCccEEE
Confidence 345689999999999999988765667889999874431 001110000 12344445543 11122357899999
Q ss_pred EcCCCCCCCCcc-cCCccHHHHHHHHcccCCCC-cEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeee
Q 025534 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNL 248 (251)
Q Consensus 181 ~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pg-G~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (251)
+|.... ...+. .+..+.+.++. +.+.|+|| |.|++..-.| + .+.+..+++.|+..|..|..+
T Consensus 146 sD~apn-sG~~~~D~~rs~~LL~~-a~~~LkpG~G~FV~KVf~p--y--g~~~~~l~~~lk~~F~~V~~~ 209 (277)
T 3evf_A 146 CDIGES-SSSSVTEGERTVRVLDT-VEKWLACGVDNFCVKVLAP--Y--MPDVLEKLELLQRRFGGTVIR 209 (277)
T ss_dssp ECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT--T--SHHHHHHHHHHHHHHCCEEEC
T ss_pred ecCccC-cCchHHHHHHHHHHHHH-HHHHhCCCCCeEEEEecCC--C--CccHHHHHHHHHHhcCCEEEE
Confidence 997533 21110 11112233555 57899999 9999976433 2 345778899999999988654
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.54 E-value=1.1e-07 Score=82.53 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCC--cEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH-hcCCC---
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTV--EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKE--- 174 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l-~~~~~--- 174 (251)
.++.+|||||||+|.++..+++.... .+|++||+|+.+++.+++++ . ++++++++|+.++- .....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGCCGGGGSCSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcCChhHhccccc
Confidence 35679999999999999999986321 23999999999999999873 2 47999999998752 11111
Q ss_pred -ceeEEEEcCC
Q 025534 175 -SYDVIIGDLA 184 (251)
Q Consensus 175 -~fD~Ii~D~~ 184 (251)
..+.|+.|+|
T Consensus 113 ~~~~~vv~NlP 123 (279)
T 3uzu_A 113 EPSLRIIGNLP 123 (279)
T ss_dssp SCCEEEEEECC
T ss_pred CCceEEEEccC
Confidence 3457888876
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.54 E-value=1.8e-07 Score=81.24 Aligned_cols=108 Identities=12% Similarity=0.030 Sum_probs=80.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcC-----CCcEEEEEECChH--------------------------HHHHHHhchhcc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEE--------------------------VVEFCKSYLVVN 149 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~a~~~~~~~ 149 (251)
..|++||++|+..|..+..++... +..+|+++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 457899999999999887765421 2468999997421 366788887643
Q ss_pred cCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 150 KEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 150 ~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+ +..++++++.+|+.+.+.+. .++||+|++|.-. .-.+.++++. +..+|+|||++++.-
T Consensus 185 g--l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--------y~~~~~~Le~-~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 D--LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--------YESTWDTLTN-LYPKVSVGGYVIVDD 244 (282)
T ss_dssp T--CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--------HHHHHHHHHH-HGGGEEEEEEEEESS
T ss_pred C--CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--------cccHHHHHHH-HHhhcCCCEEEEEcC
Confidence 2 22479999999999998764 4789999999621 1124678888 799999999998843
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.53 E-value=7.7e-08 Score=82.22 Aligned_cols=75 Identities=12% Similarity=0.197 Sum_probs=57.3
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcE--EEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH-HhcC---CC
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEK--VVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR---KE 174 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~-l~~~---~~ 174 (251)
.+..+|||||||+|.++. +.+ . .+ |++||+|+.+++.+++++.. .++++++++|+.++ +... .+
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~--~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~ 89 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-E--RLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKMG 89 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-T--TCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHHT
T ss_pred CCcCEEEEECCCCcHHHH-hhh-C--CCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhhcccC
Confidence 345789999999999999 654 3 35 99999999999999998652 25899999999874 2111 12
Q ss_pred ceeEEEEcCCC
Q 025534 175 SYDVIIGDLAD 185 (251)
Q Consensus 175 ~fD~Ii~D~~~ 185 (251)
..|.|+.++|.
T Consensus 90 ~~~~vvsNlPY 100 (252)
T 1qyr_A 90 QPLRVFGNLPY 100 (252)
T ss_dssp SCEEEEEECCT
T ss_pred CceEEEECCCC
Confidence 45789999864
No 286
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.46 E-value=9.2e-09 Score=87.16 Aligned_cols=106 Identities=16% Similarity=0.299 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++-...+++| .|+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~f-~vv 98 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQFQFPNKQRY-KIV 98 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTTTTCCCSSEE-EEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhhcCcccCCCc-EEE
Confidence 356789999999999999999873 6999999999999999887651 3689999999887531113579 788
Q ss_pred EcCCCCCCCCcc-c-----CCccHHHH----HHHHcccCCCCcEEEE
Q 025534 181 GDLADPIEGGPC-Y-----KLYTKSFY----EFVVKPRLNPEGIFVT 217 (251)
Q Consensus 181 ~D~~~~~~~~p~-~-----~l~~~ef~----~~~~~~~L~pgG~l~~ 217 (251)
+|+|.... .+. . ......++ +. +.++|+|||.+++
T Consensus 99 ~n~Py~~~-~~~~~~~~~~~~~~~~~lm~q~e~-a~rll~~~G~l~v 143 (245)
T 1yub_A 99 GNIPYHLS-TQIIKKVVFESRASDIYLIVEEGF-YKRTLDIHRTLGL 143 (245)
T ss_dssp EECCSSSC-HHHHHHHHHHCCCEEEEEEEESSH-HHHHHCGGGSHHH
T ss_pred EeCCcccc-HHHHHHHHhCCCCCeEEEEeeHHH-HHHHhCCCCchhh
Confidence 88764321 000 0 00111222 44 5788999987654
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.38 E-value=1.1e-07 Score=81.96 Aligned_cols=133 Identities=14% Similarity=0.038 Sum_probs=83.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc--chHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN--DARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~--D~~~~l~~~~~~fD~ 178 (251)
....+|||||||.|+.+..+++..++.+|.++|+...+...+... .. ...++..... |... ..++++|+
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~--~~----~g~~ii~~~~~~dv~~---l~~~~~Dv 159 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR--TT----LGWNLIRFKDKTDVFN---MEVIPGDT 159 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC--CB----TTGGGEEEECSCCGGG---SCCCCCSE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc--cc----CCCceEEeeCCcchhh---cCCCCcCE
Confidence 345689999999999999988765677899999976532111110 00 0123332332 4322 24578999
Q ss_pred EEEcCCCCCCCCc-ccCCccHHHHHHHHcccCCCC--cEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeee
Q 025534 179 IIGDLADPIEGGP-CYKLYTKSFYEFVVKPRLNPE--GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNL 248 (251)
Q Consensus 179 Ii~D~~~~~~~~p-~~~l~~~ef~~~~~~~~L~pg--G~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (251)
|++|.... ...+ ..+.-+.+.++. +.+.|+|| |.|++..-.| + .+.+..+++.|+..|..|..+
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~-A~~~Lk~g~~G~Fv~KvF~p--y--g~~~~~l~~~lk~~F~~V~~~ 226 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNC-AKQWLQEGNYTEFCIKVLCP--Y--TPLIMEELSRLQLKHGGGLVR 226 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHH-HHHHHHHHCCCEEEEEESCC--C--SHHHHHHHHHHHHHHCCEEEC
T ss_pred EEecCccC-CCChHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEEecC--C--CccHHHHHHHHHHhcCCEEEE
Confidence 99997643 2111 011122234555 57899999 9999986332 1 345678899999999988654
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.26 E-value=1.8e-06 Score=74.81 Aligned_cols=134 Identities=13% Similarity=0.082 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc-chHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~-D~~~~l~~~~~~fD~I 179 (251)
.+.++||||||+.|+.+..+++..++..|+++|+....... +.....+..+-+.+..+ |.+ ...++++|+|
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~-----P~~~~~~~~~iv~~~~~~di~---~l~~~~~DlV 151 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEK-----PIHMQTLGWNIVKFKDKSNVF---TMPTEPSDTL 151 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCC-----CCCCCBTTGGGEEEECSCCTT---TSCCCCCSEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccc-----cccccccCCceEEeecCceee---ecCCCCcCEE
Confidence 46789999999999999999986567789999996532100 00000000011222212 322 2235789999
Q ss_pred EEcCCCCCCCCc-ccCCccHHHHHHHHcccCCCC-cEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeee
Q 025534 180 IGDLADPIEGGP-CYKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNL 248 (251)
Q Consensus 180 i~D~~~~~~~~p-~~~l~~~ef~~~~~~~~L~pg-G~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (251)
++|.... ...+ ..+.-+.+.++. +.+.|+|| |.|++..-.| + .+.+..++..|+..|..|..+
T Consensus 152 lsD~APn-sG~~~~D~~rs~~LL~~-A~~~LkpG~G~FV~KvF~~--y--G~~~~~ll~~lk~~F~~V~~~ 216 (300)
T 3eld_A 152 LCDIGES-SSNPLVERDRTMKVLEN-FERWKHVNTENFCVKVLAP--Y--HPDVIEKLERLQLRFGGGIVR 216 (300)
T ss_dssp EECCCCC-CSSHHHHHHHHHHHHHH-HHHHCCTTCCEEEEEESST--T--SHHHHHHHHHHHHHHCCEEEC
T ss_pred eecCcCC-CCCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEEeccc--c--CccHHHHHHHHHHhCCcEEEE
Confidence 9997633 2111 011112334555 57899999 9999986433 2 345678899999999988654
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.20 E-value=7.3e-06 Score=70.79 Aligned_cols=73 Identities=30% Similarity=0.284 Sum_probs=61.6
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH---HhcCC-Ccee
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK-ESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~~-~~fD 177 (251)
++..++|.+||.|+-+..+++. + .+|+++|.||.+++.|++ +. . +|++++++|..++ +...+ +++|
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~-~-g~VigiD~Dp~Ai~~A~~-L~------~-~rv~lv~~~f~~l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER-G-GRVIGLDQDPEAVARAKG-LH------L-PGLTVVQGNFRHLKRHLAALGVERVD 91 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHH-TC------C-TTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC-C-CEEEEEeCCHHHHHHHHh-hc------c-CCEEEEECCcchHHHHHHHcCCCCcC
Confidence 4578999999999999999997 3 699999999999999998 63 1 5899999999876 44333 5799
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
.|+.|+.
T Consensus 92 gIL~DLG 98 (285)
T 1wg8_A 92 GILADLG 98 (285)
T ss_dssp EEEEECS
T ss_pred EEEeCCc
Confidence 9999874
No 290
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.14 E-value=6.2e-06 Score=79.52 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=81.3
Q ss_pred CCeEEEEecCchHHHHHHHhcC------------CCcEEEEEEC---ChHHHHHHHhchhc------------cc---C-
Q 025534 103 PKTIFIMGGGEGSTAREILRHK------------TVEKVVMCDI---DEEVVEFCKSYLVV------------NK---E- 151 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~a~~~~~~------------~~---~- 151 (251)
.-+||++|.|+|......++.. ..-+++.+|. +++.+..+-++++. +. +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999765554321 1136899999 88888754443221 00 0
Q ss_pred ---CCC--CCCeEEEEcchHHHHhcC----CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 152 ---AFS--DPRLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 152 ---~~~--~~rv~~~~~D~~~~l~~~----~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.+. .-+++++.+|+++.+.+. ..+||+|++|.|.|.. +| .+++.++|+. +.++++|||+++..+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np--~~w~~~~~~~-l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NP--DMWTQNLFNA-MARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CG--GGSCHHHHHH-HHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-Ch--hhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 011 245678999999999864 3679999999997752 34 6999999999 899999999998754
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.11 E-value=4.2e-06 Score=80.92 Aligned_cols=114 Identities=15% Similarity=0.160 Sum_probs=79.0
Q ss_pred CCCeEEEEecCchHHHHHHHhcC--------C----CcEEEEEEC---ChHHHHHHHhchhc------------c----c
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK--------T----VEKVVMCDI---DEEVVEFCKSYLVV------------N----K 150 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~--------~----~~~v~~VEi---d~~vi~~a~~~~~~------------~----~ 150 (251)
++-+||++|.|+|.....+.+.. . .-+++.+|. +.+.+..+-+.++. + +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999766554421 1 147899999 44444433322210 0 0
Q ss_pred ---CCCCCC--CeEEEEcchHHHHhcC----CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 151 ---EAFSDP--RLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 151 ---~~~~~~--rv~~~~~D~~~~l~~~----~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
-.+.+. +++++.+|+++.+.+. ..++|.|++|.|.|.. +| .+++.++|.. +.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np--~~w~~~~~~~-l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NP--DMWNEQLFNA-MARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CC--TTCSHHHHHH-HHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-Ch--hhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 011222 5789999999999764 4689999999998763 44 6999999999 899999999998754
No 292
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.09 E-value=1.4e-05 Score=69.10 Aligned_cols=121 Identities=21% Similarity=0.264 Sum_probs=73.2
Q ss_pred CCCCCeEEEEec------CchHHH-HHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC
Q 025534 100 HPNPKTIFIMGG------GEGSTA-REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR 172 (251)
Q Consensus 100 ~~~~~~VL~iG~------G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~ 172 (251)
.|...+||++|+ ..|+.. +.+ .+..+.|+++|+.+-.. ++. .++.+|.... ..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~--~p~g~~VVavDL~~~~s---------------da~-~~IqGD~~~~--~~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQW--LPTGTLLVDSDLNDFVS---------------DAD-STLIGDCATV--HT 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHH--SCTTCEEEEEESSCCBC---------------SSS-EEEESCGGGE--EE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHh--CCCCcEEEEeeCccccc---------------CCC-eEEEcccccc--cc
Confidence 577899999996 556632 222 23225899999986431 123 4499997653 23
Q ss_pred CCceeEEEEcCCCCCCC---Ccc-cCC-ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceee
Q 025534 173 KESYDVIIGDLADPIEG---GPC-YKL-YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYN 247 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~---~p~-~~l-~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (251)
..+||+|++|....... .+. ... +.+..+.- ++++|+|||.|++..- .... . ..+..+++.|..|..
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdf-A~~~LkpGGsFvVKVF-----QGsg-~-~~L~~lrk~F~~VK~ 238 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKIT-----EHSW-N-ADLYKLMGHFSWWTA 238 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEEC-----SSSC-C-HHHHHHHTTEEEEEE
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHH-HHHhCcCCCEEEEEEe-----cCCC-H-HHHHHHHhhCCeEEE
Confidence 57899999998643221 110 011 12333443 5789999999998762 1111 1 334556678887776
Q ss_pred e
Q 025534 248 L 248 (251)
Q Consensus 248 ~ 248 (251)
+
T Consensus 239 f 239 (344)
T 3r24_A 239 F 239 (344)
T ss_dssp E
T ss_pred E
Confidence 5
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.07 E-value=1.5e-05 Score=67.66 Aligned_cols=130 Identities=14% Similarity=0.032 Sum_probs=80.3
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCe---EEEEc-chHHHHhcCCCc
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL---ELVIN-DARAELESRKES 175 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv---~~~~~-D~~~~l~~~~~~ 175 (251)
..+..+||||||+-|+.+..+++..++..|.+..+.... .-.+... ..+.+ ++..+ |.++ ..+.+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~~---~~~Gv~~i~~~~G~Df~~---~~~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPMLM---QSYGWNIVTMKSGVDVFY---KPSEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCCC---CSTTGGGEEEECSCCGGG---SCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCcc---cCCCceEEEeeccCCccC---CCCCC
Confidence 345789999999999999999886444455555554331 0111110 11344 44447 9776 23468
Q ss_pred eeEEEEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCCc-EEEEecCCCCCCCChHHHHHHHHHHHhhCCcee
Q 025534 176 YDVIIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG-IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGY 246 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG-~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~ 246 (251)
+|+|++|.... ...+. .+.-+...+.. +.+.|+||| .|++..-.+ ..+.+.+.++.|+..|..+.
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~-A~~~Lk~gG~~FvvKVFqg----~~~~~~~~l~~lk~~F~~vk 206 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEM-VSDWLSRGPKEFCIKILCP----YMPKVIEKLESLQRRFGGGL 206 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT----TSHHHHHHHHHHHHHHCCEE
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHH-HHHHhhcCCcEEEEEECCC----CchHHHHHHHHHHHHcCCEE
Confidence 99999998642 21211 11112224444 468999999 998876322 12567788889999998876
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.07 E-value=2.8e-05 Score=65.24 Aligned_cols=132 Identities=15% Similarity=0.093 Sum_probs=88.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc-chHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~-D~~~~l~~~~~~fD~I 179 (251)
....+||||||+.|+.+..++...++.+|.++|+-+.-. ..+..-..+.-+-+++..+ |.+. + .+.++|.|
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gvDv~~-~--~~~~~Dtl 148 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGKDVFY-L--PPEKCDTL 148 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSCCGGG-C--CCCCCSEE
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEeccceee-c--CCccccEE
Confidence 345699999999999999888877788999999976432 1121111223357899999 9632 2 34789999
Q ss_pred EEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceee
Q 025534 180 IGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYN 247 (251)
Q Consensus 180 i~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (251)
+||... ....|. +.--+...++. +.+.|++ |-+++..-.| . .++ +.+.++.|+..|..+..
T Consensus 149 lcDIge-Ss~~~~vE~~RtlrvLel-a~~wL~~-~~fc~KVl~p--y-~p~-v~e~l~~lq~~fgg~lV 210 (267)
T 3p8z_A 149 LCDIGE-SSPSPTVEESRTIRVLKM-VEPWLKN-NQFCIKVLNP--Y-MPT-VIEHLERLQRKHGGMLV 210 (267)
T ss_dssp EECCCC-CCSCHHHHHHHHHHHHHH-HGGGCSS-CEEEEEESCC--C-SHH-HHHHHHHHHHHHCCEEE
T ss_pred EEecCC-CCCChhhhhhHHHHHHHH-HHHhccc-CCEEEEEccC--C-Chh-HHHHHHHHHHHhCCEeE
Confidence 999864 211221 11123345665 5788998 8888888766 2 333 44777888888887654
No 295
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.82 E-value=5.9e-06 Score=64.49 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=46.2
Q ss_pred CCCCeEEEEecCch-HHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
..+.+||+||||.| ..+..|+++.+ ..|+++|++|..++ ++.+|.++-..+.-+.||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccccCCcCEE
Confidence 34679999999999 59999887544 58999999987665 55566654322112589999
Q ss_pred -EEcCC
Q 025534 180 -IGDLA 184 (251)
Q Consensus 180 -i~D~~ 184 (251)
-+++|
T Consensus 94 YsirPP 99 (153)
T 2k4m_A 94 YSIRPP 99 (153)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 55654
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.81 E-value=2.9e-05 Score=67.13 Aligned_cols=134 Identities=13% Similarity=0.072 Sum_probs=86.5
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc-chHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~-D~~~~l~~~~~~fD~I 179 (251)
....+||||||+.|+.+..++...++.+|.++|+-..-.+ .|..-..+.-+-+.+..+ |++. +. +.++|+|
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~Dv~~-l~--~~~~D~i 164 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVDVFY-RP--SECCDTL 164 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCCTTS-SC--CCCCSEE
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccCHhh-CC--CCCCCEE
Confidence 3456999999999999998888777788999999754210 010000111123777777 7643 32 3779999
Q ss_pred EEcCCCCCCCCcc-cCCccHHHHHHHHcccCCCC-cEEEEecCCCCCCCChHHHHHHHHHHHhhCCceeee
Q 025534 180 IGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYNL 248 (251)
Q Consensus 180 i~D~~~~~~~~p~-~~l~~~ef~~~~~~~~L~pg-G~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~~ 248 (251)
++|..... ..|. +.--+...++. +.+.|+++ |-+++....| + .+ .+.+.++.|+..|..+..+
T Consensus 165 vcDigeSs-~~~~ve~~Rtl~vLel-~~~wL~~~~~~f~~KVl~p--Y-~~-~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 165 LCDIGESS-SSAEVEEHRTIRVLEM-VEDWLHRGPREFCVKVLCP--Y-MP-KVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp EECCCCCC-SCHHHHHHHHHHHHHH-HHHHHTTCCCEEEEEESCT--T-SH-HHHHHHHHHHHHHCCEEEC
T ss_pred EEECccCC-CChhhhhhHHHHHHHH-HHHHhccCCCcEEEEEcCC--C-Ch-HHHHHHHHHHHHhCCEeEe
Confidence 99987322 1221 11122335555 57889998 8999988666 3 23 3447888888888877543
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.72 E-value=4.9e-05 Score=71.44 Aligned_cols=80 Identities=11% Similarity=0.042 Sum_probs=57.9
Q ss_pred CCCeEEEEecCchHHHHHHHhc----CC---------CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH
Q 025534 102 NPKTIFIMGGGEGSTAREILRH----KT---------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~----~~---------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~ 168 (251)
.+.+|+|-.||+|++...+.++ .. ...+.++|+++.+..+|+-++-+++ ....++.++|...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----CccccccccccccC
Confidence 3568999999999998766542 11 1369999999999999998876553 23346778887543
Q ss_pred H-hc--CCCceeEEEEcCCC
Q 025534 169 L-ES--RKESYDVIIGDLAD 185 (251)
Q Consensus 169 l-~~--~~~~fD~Ii~D~~~ 185 (251)
- .. ...+||+|+.|||.
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCS
T ss_pred chhhhcccccceEEEecCCC
Confidence 1 11 13579999999984
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.67 E-value=0.00027 Score=63.69 Aligned_cols=111 Identities=11% Similarity=-0.024 Sum_probs=69.1
Q ss_pred CCeEEEEecCchHHHHHHHhc-----------------CCCcEEEEEECC-----------hHHHHHHHhchhcccCCCC
Q 025534 103 PKTIFIMGGGEGSTAREILRH-----------------KTVEKVVMCDID-----------EEVVEFCKSYLVVNKEAFS 154 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~a~~~~~~~~~~~~ 154 (251)
+-+|+|+||++|..+..+... .+.-+|...|+- |...+.+++..+ .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 678999999999877655543 223467777776 444433322211 1
Q ss_pred CCCeEEEEcchHHHHhc--CCCceeEEEEcCCCCCCCCcccCCcc------------------H---------------H
Q 025534 155 DPRLELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLYT------------------K---------------S 199 (251)
Q Consensus 155 ~~rv~~~~~D~~~~l~~--~~~~fD~Ii~D~~~~~~~~p~~~l~~------------------~---------------e 199 (251)
..+--++.+.+..|..+ +.+++|+|+++..-+|-......+.. . .
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12346777777776643 36899999999987774322222221 1 2
Q ss_pred HHHHHHcccCCCCcEEEEecC
Q 025534 200 FYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 200 f~~~~~~~~L~pgG~l~~~~~ 220 (251)
|++. .++.|+|||++++...
T Consensus 207 FL~~-Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 207 FLRI-HSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHH-HHHHEEEEEEEEEEEE
T ss_pred HHHH-HHHHhccCCeEEEEEe
Confidence 3554 5799999999998764
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.64 E-value=5.7e-05 Score=67.41 Aligned_cols=59 Identities=8% Similarity=0.096 Sum_probs=50.0
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~ 168 (251)
...||+||.|.|.++..|++.....+|++||+|+..+...++.+. .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~-------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE-------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT-------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc-------CCCEEEEECCccch
Confidence 468999999999999999985333689999999999998887651 36899999999765
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.60 E-value=0.00025 Score=63.53 Aligned_cols=70 Identities=10% Similarity=0.062 Sum_probs=54.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
.++.+|||||++.|+.+..++++ + .+|++||+.+.--. .. .+|+|+++.+|++.+.. ...++|+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r-g-~~V~aVD~~~l~~~-l~----------~~~~V~~~~~d~~~~~~-~~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR-N-MWVYSVDNGPMAQS-LM----------DTGQVTWLREDGFKFRP-TRSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CEEEEECSSCCCHH-HH----------TTTCEEEECSCTTTCCC-CSSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC-C-CEEEEEEhhhcChh-hc----------cCCCeEEEeCccccccC-CCCCcCEEE
Confidence 45789999999999999999987 3 59999998652211 11 35899999999988743 246899999
Q ss_pred EcCC
Q 025534 181 GDLA 184 (251)
Q Consensus 181 ~D~~ 184 (251)
+|..
T Consensus 276 sDm~ 279 (375)
T 4auk_A 276 CDMV 279 (375)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 9975
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.53 E-value=0.00023 Score=63.19 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=80.1
Q ss_pred CCeEEEEecCchHHHHHHHhcCC-CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC-C-CceeEE
Q 025534 103 PKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-K-ESYDVI 179 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~-~~fD~I 179 (251)
+.+|+|+.||.|++...+.+..- ...|.++|+|+.+++..+.+++ ...++.+|..++.... . ..+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---------~~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---------HTQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---------ccccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999998887531 3579999999999999999864 2346778877653211 1 269999
Q ss_pred EEcCCCCC-C-CCc-------ccCCccHHHHHHHHcccCC--CCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 180 IGDLADPI-E-GGP-------CYKLYTKSFYEFVVKPRLN--PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 180 i~D~~~~~-~-~~p-------~~~l~~~ef~~~~~~~~L~--pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+.++|.+. . .+. ...| -.++++. .+.++ |.-+++=|+. + +.....+..+++.|.+.
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l-~~~~~~~--i~~~~~~P~~~~~ENV~--~-l~~~~~~~~i~~~l~~~ 139 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNS-FLHILDI--LPRLQKLPKYILLENVK--G-FEVSSTRDLLIQTIENC 139 (343)
T ss_dssp EECCC------------------CH-HHHHHHH--GGGCSSCCSEEEEEEET--T-GGGSHHHHHHHHHHHHT
T ss_pred EEcCCCcchhhcCCcCCccCccchH-HHHHHHH--HHHhcCCCCEEEEeCCc--c-ccCHHHHHHHHHHHHHC
Confidence 99998321 1 111 0112 1355554 35677 8866664542 2 22345677888888764
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.40 E-value=0.00048 Score=60.84 Aligned_cols=75 Identities=23% Similarity=0.262 Sum_probs=59.8
Q ss_pred CCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHH---hcCC--Cc
Q 025534 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL---ESRK--ES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l---~~~~--~~ 175 (251)
++..++|..+|.|+-+..+++. .+..+|+++|.||++++.++ .+ .++|+++++++..++. ...+ ++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 4578999999999999999986 34579999999999999995 33 1469999999887653 2222 36
Q ss_pred eeEEEEcCC
Q 025534 176 YDVIIGDLA 184 (251)
Q Consensus 176 fD~Ii~D~~ 184 (251)
+|.|+.|+-
T Consensus 129 vDgILfDLG 137 (347)
T 3tka_A 129 IDGILLDLG 137 (347)
T ss_dssp EEEEEEECS
T ss_pred ccEEEECCc
Confidence 999999984
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.31 E-value=0.00063 Score=58.95 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=40.6
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~ 148 (251)
.++..|||++||+|.++..+++.. .+++++|+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 456789999999999999988863 6899999999999999998753
No 304
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.28 E-value=0.00033 Score=62.93 Aligned_cols=118 Identities=11% Similarity=0.048 Sum_probs=70.9
Q ss_pred CCCCeEEEEecCchHHHHHHHh--------c-------CCCcEEEEEECChHHHHHHHhchhcccCC-----C---CCCC
Q 025534 101 PNPKTIFIMGGGEGSTAREILR--------H-------KTVEKVVMCDIDEEVVEFCKSYLVVNKEA-----F---SDPR 157 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~--------~-------~~~~~v~~VEid~~vi~~a~~~~~~~~~~-----~---~~~r 157 (251)
+.+-+|+|+|||+|..+..+.. + ++.-+|...|+-..-....-+.++..... . ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 3467899999999987766521 1 13357778887666554443333321100 0 0112
Q ss_pred eEEEEcchHHHHhc--CCCceeEEEEcCCCCCCCCcccCCc--------------------------------cHHHHHH
Q 025534 158 LELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLY--------------------------------TKSFYEF 203 (251)
Q Consensus 158 v~~~~~D~~~~l~~--~~~~fD~Ii~D~~~~~~~~p~~~l~--------------------------------~~ef~~~ 203 (251)
-.++.+.+..|-.+ +.+++|+|++...-+|.......+. -..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23566666665433 3689999999998777432222221 0235665
Q ss_pred HHcccCCCCcEEEEec
Q 025534 204 VVKPRLNPEGIFVTQA 219 (251)
Q Consensus 204 ~~~~~L~pgG~l~~~~ 219 (251)
.++.|+|||++++..
T Consensus 211 -ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 -RAAEVKRGGAMFLVC 225 (374)
T ss_dssp -HHHHEEEEEEEEEEE
T ss_pred -HHHHhCCCCEEEEEE
Confidence 689999999998876
No 305
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.16 E-value=0.0026 Score=55.98 Aligned_cols=122 Identities=15% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
..+|+++.||.|++...+.+. +...+.++|+|+..++..+.+++.. . .+|..++....-..+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhCCCCCEEEEC
Confidence 468999999999999998875 5677899999999999999987521 1 588877654333469999999
Q ss_pred CCCCC-C-CC-------cccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCC--ChHHHHHHHHHHHhh
Q 025534 183 LADPI-E-GG-------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVFSCIYNTLRQV 241 (251)
Q Consensus 183 ~~~~~-~-~~-------p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~--~~~~~~~i~~~l~~~ 241 (251)
+|... + .+ +...| -.++++. + +.++|.-+++=|+ ++... ....+..+++.|++.
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L-~~~~~r~-i-~~~~P~~~~~ENV--~gl~~~~~~~~~~~i~~~l~~~ 143 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTL-FFDIARI-V-REKKPKVVFMENV--KNFASHDNGNTLEVVKNTMNEL 143 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCH-HHHHHHH-H-HHHCCSEEEEEEE--GGGGTGGGGHHHHHHHHHHHHT
T ss_pred CCCCCcchhcccCCCcchhhHH-HHHHHHH-H-HhccCcEEEEeCc--HHHHhccccHHHHHHHHHHHhC
Confidence 98432 1 11 11112 2456664 3 4679986665554 22121 235677888888764
No 306
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.16 E-value=0.00043 Score=61.85 Aligned_cols=115 Identities=10% Similarity=0.043 Sum_probs=76.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhc----------------CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH----------------KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND 164 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~----------------~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D 164 (251)
+.+-+|+|+||++|..+..+... .+.-+|...|+-......+-+.++... ...+--++.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~gv 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFINGV 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEec
Confidence 45578999999999754432221 234578999998888888877765321 11144677777
Q ss_pred hHHHHhc--CCCceeEEEEcCCCCCCCCcccC--------------------Ccc-------HHHHHHHHcccCCCCcEE
Q 025534 165 ARAELES--RKESYDVIIGDLADPIEGGPCYK--------------------LYT-------KSFYEFVVKPRLNPEGIF 215 (251)
Q Consensus 165 ~~~~l~~--~~~~fD~Ii~D~~~~~~~~p~~~--------------------l~~-------~ef~~~~~~~~L~pgG~l 215 (251)
+..|..+ +.+++|+|++...-+|-...+.. .|. ..|++. .++.|+|||++
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~-Ra~EL~pGG~m 205 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC-RAQEVVPGGRM 205 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH-HHHHBCTTCEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCceE
Confidence 7777543 36899999999887774221111 222 235665 58999999999
Q ss_pred EEec
Q 025534 216 VTQA 219 (251)
Q Consensus 216 ~~~~ 219 (251)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.06 E-value=0.0011 Score=59.62 Aligned_cols=122 Identities=17% Similarity=0.148 Sum_probs=80.3
Q ss_pred CeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-------CCCce
Q 025534 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-------RKESY 176 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-------~~~~f 176 (251)
-+|+||.||.|+++..+.+. +...+.+||+|+..++..+.+++ ...++.+|..+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999988876 45678899999999999988753 456778887764211 23679
Q ss_pred eEEEEcCCCCCC--CCcc------cCCccHHHHHHHHcccCCCCcEEEEecCCCCCCC--ChHHHHHHHHHHHhh
Q 025534 177 DVIIGDLADPIE--GGPC------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVFSCIYNTLRQV 241 (251)
Q Consensus 177 D~Ii~D~~~~~~--~~p~------~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~--~~~~~~~i~~~l~~~ 241 (251)
|+|+.++|.+.. .+.. ..| -.+|++. -+.++|.-+++=|+ ++... ....+..++ .|.+.
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L-~~~~~~~--v~~~~P~~~v~ENV--~gl~s~~~~~~~~~i~-~l~~~ 141 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQL-YMHFYRL--VSELQPLFFLAENV--PGIMQEKYSGIRNKAF-NLVSG 141 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHH-HHHHHHH--HHHHCCSEEEEEEC--TTTTCGGGHHHHHHHH-HHHHT
T ss_pred eEEEecCCCCCcccccCCCCCCchHHH-HHHHHHH--HHHhCCCEEEEecc--hHhhccCcHHHHHHHH-HHHcC
Confidence 999999984321 1110 111 1345554 35689987766565 22222 234666776 66654
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.76 E-value=0.0022 Score=56.26 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++.-.. .-+.....|..+.+.+..+.+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~-------~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAE-------VAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTCS-------EEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHcCCC-------EEEeCCCcCHHHHHHHhCCCCCEE
Confidence 3568999999875 778888888766 4999999999999999874210 001111134455554433479999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.... . .+.++. +.+.|+++|+++...
T Consensus 237 id~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAV-----S-------PKAFSQ-AIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEeCC-----C-------HHHHHH-HHHHhccCCEEEEeC
Confidence 86632 1 245666 578999999988653
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.76 E-value=0.012 Score=51.80 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=63.3
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE------cchHHHHhc-C
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES-R 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~------~D~~~~l~~-~ 172 (251)
.++.+||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-. . .++. .|..+-+.. .
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--------~--~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA--------D--LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--------S--EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC--------C--EEEcCcccccchHHHHHHHHh
Confidence 4568999999875 6677788887665589999999999999886411 1 1221 122222322 2
Q ss_pred CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
++.+|+|+-... . ...++. ..+.|+++|+++.-.
T Consensus 240 ~~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG-----A-------EASIQA-GIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEe
Confidence 357999986532 1 234566 578899999998643
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.73 E-value=0.011 Score=52.29 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=66.0
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-----EcchHHHHhc-C-
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-----INDARAELES-R- 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-----~~D~~~~l~~-~- 172 (251)
.++.+||++|+|+ |.++.++++..+...|++++.+++-.+.+++. .. .-+... ..|..+.+.+ +
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHhC
Confidence 4568999999865 56777888876655599999999999999986 21 112222 1333444433 2
Q ss_pred CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+..+|+|+-... . ...++. +.+.|+++|+++.-.
T Consensus 250 g~g~Dvvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG-----V-------ESSIAA-AIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEc
Confidence 457999986432 1 235666 578999999998654
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.72 E-value=0.003 Score=56.10 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=64.2
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 178 (251)
.+..+||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-. . .-+.....|..+-+.+ .++.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~------~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-T------HVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-S------EEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-C------EEecCCccCHHHHHHHhcCCCCcE
Confidence 3568999999876 6677788876565579999999999999986411 0 0001001233333432 3347999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+-... . .+.++. ..+.|+++|+++.-.
T Consensus 262 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG-----S-------PEILKQ-GVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC-----C-------HHHHHH-HHHTEEEEEEEEECC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEeC
Confidence 985432 1 245666 578999999988643
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.68 E-value=0.014 Score=49.56 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=71.1
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-------CCCcEEEEEE-----CChH----------------------HHH-HH--H
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-------KTVEKVVMCD-----IDEE----------------------VVE-FC--K 143 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-------~~~~~v~~VE-----id~~----------------------vi~-~a--~ 143 (251)
.-|..|+++|+-.|..+..++.. ....+|.+.| ..+. .++ .. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45789999999999987765431 2346899998 2210 011 11 1
Q ss_pred hchhcccCCCCCCCeEEEEcchHHHHhc-----CCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 144 SYLVVNKEAFSDPRLELVINDARAELES-----RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 144 ~~~~~~~~~~~~~rv~~~~~D~~~~l~~-----~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+++...+ ...++++++.|++.+.+.. ...++|+|.+|.- . .--+...++. +..+|+|||++++.
T Consensus 148 ~~~~~~g--~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~-------Y~~t~~~le~-~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFFG--HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-L-------YEPTKAVLEA-IRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTTT--TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-C-------HHHHHHHHHH-HGGGEEEEEEEEES
T ss_pred hhhhhcC--CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-c-------cchHHHHHHH-HHHHhCCCcEEEEc
Confidence 1111111 1247999999999998754 2357999999962 1 1125677888 68999999999985
Q ss_pred c
Q 025534 219 A 219 (251)
Q Consensus 219 ~ 219 (251)
-
T Consensus 217 D 217 (257)
T 3tos_A 217 E 217 (257)
T ss_dssp S
T ss_pred C
Confidence 4
No 313
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.65 E-value=0.019 Score=53.21 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=84.4
Q ss_pred CCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh------------
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE------------ 170 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~------------ 170 (251)
.-+|++|.||.|++...+.+. +...|.++|+|+..++..+.++.. .|...++.+|..++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 357999999999999988775 455689999999999998888742 3556778899988752
Q ss_pred ----cCCCceeEEEEcCCCCC-C-CC----------------cccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCC--
Q 025534 171 ----SRKESYDVIIGDLADPI-E-GG----------------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS-- 226 (251)
Q Consensus 171 ----~~~~~fD~Ii~D~~~~~-~-~~----------------p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~-- 226 (251)
.....+|+|+..+|.+. + .+ +...| -.++++. + +.++|.-+++=|+ ++...
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~L-f~e~~ri-I-~~~rPk~fvlENV--~gl~s~~ 235 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTL-FFDVVRI-I-DARRPAMFVLENV--KNLKSHD 235 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSH-HHHHHHH-H-HHHCCSEEEEEEE--TTTTTGG
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccH-HHHHHHH-H-HHcCCcEEEEeCc--HHHhccc
Confidence 11246899999887432 1 11 10112 2455554 3 4678976666555 22222
Q ss_pred ChHHHHHHHHHHHhh
Q 025534 227 HTEVFSCIYNTLRQV 241 (251)
Q Consensus 227 ~~~~~~~i~~~l~~~ 241 (251)
....+..+++.|.+.
T Consensus 236 ~g~~f~~i~~~L~~l 250 (482)
T 3me5_A 236 KGKTFRIIMQTLDEL 250 (482)
T ss_dssp GGHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHhcC
Confidence 235778888888764
No 314
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.58 E-value=0.0044 Score=52.48 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=40.8
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhc
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~ 148 (251)
.++..|||..||+|+++..+.+.. .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 566789999999999999988863 6999999999999999998764
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.50 E-value=0.0038 Score=54.97 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=63.8
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD 177 (251)
.++.+||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-. . .-+.....|..+.+.+ + +..+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-~------~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-T------DIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-C------EEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-c------eEEcCCCcCHHHHHHHHcCCCCCC
Confidence 4568999999875 5667788887665589999999999999987521 0 0011111344444433 2 34799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|+-... .+ +.++. ..+.|+++|+++.-
T Consensus 238 ~v~d~~g-----~~-------~~~~~-~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGG-----DV-------HTFAQ-AVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSS-----CT-------THHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCC-----Ch-------HHHHH-HHHHHhcCCEEEEe
Confidence 9985432 11 23555 57789999998854
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.50 E-value=0.0052 Score=54.65 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=66.5
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc----CCCc
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES----RKES 175 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~----~~~~ 175 (251)
.++.+||++|+|+ |.++..+++..+..+|++++.+++-.+++++. +.. .-+.....|..+.+.+ +++.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GAT------ATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCS------EEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCC------EEECCCCcCHHHHHHhhhhccCCC
Confidence 4578999999865 56677888876655899999999999999874 211 0011112355555543 2348
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+|+-... . .+.++. +.+.|+++|++++-.
T Consensus 254 ~Dvvid~~G-----~-------~~~~~~-~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAG-----V-------AETVKQ-STRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred CCEEEECCC-----C-------HHHHHH-HHHHhccCCEEEEEe
Confidence 999985431 1 245666 578899999998754
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.42 E-value=0.021 Score=50.29 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=79.6
Q ss_pred CeEEEEecCchHHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCceeEEE
Q 025534 104 KTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVII 180 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~Ii 180 (251)
-+|+++.||.|++...+.+.. +...|.++|+|+...+..+.+++ ...++.+|..+.... ....+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---------~~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---------ETNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---------CCceeccccccCCHHHhccCCCCEEE
Confidence 479999999999998887652 12568899999999999998875 234567777654321 113699999
Q ss_pred EcCCCCCC---------CCcccCCccHHHHHHHHcccCC-CCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 181 GDLADPIE---------GGPCYKLYTKSFYEFVVKPRLN-PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 181 ~D~~~~~~---------~~p~~~l~~~ef~~~~~~~~L~-pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
..+|.... ..+...|+ .++++. + +.++ |.-+++=|+ ++ +.....+..+.+.|++.
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r~-i-~~~~~P~~~vlENV--~g-l~~~~~~~~i~~~l~~~ 139 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIGI-L-DQLDNVDYILMENV--KG-FENSTVRNLFIDKLKEC 139 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHHH-G-GGCTTCCEEEEEEC--TT-GGGSHHHHHHHHHHHHT
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHHH-H-HHhcCCCEEEEecc--hh-hhhhhHHHHHHHHHHhC
Confidence 98874311 11112232 456664 3 5565 876666555 32 23344567777777764
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.29 E-value=0.0038 Score=52.90 Aligned_cols=62 Identities=11% Similarity=0.092 Sum_probs=43.7
Q ss_pred CeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCC--------ccHHHHHHHHcccCCCCcEEEEec
Q 025534 157 RLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKL--------YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 157 rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~~~l--------~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
..+++++|+.++++.. +++||+|++|||........... +..+.++. ++++|+|+|.++++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~-~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDK-VLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHH-HHHHhcCCeEEEEEc
Confidence 4578999999998764 46899999999853310000011 23466777 689999999998874
No 319
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.29 E-value=0.02 Score=50.85 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=64.3
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE--EcchHHHHhc-CCCce
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~--~~D~~~~l~~-~~~~f 176 (251)
.++.+||++|+|+ |.++..+++..+..+|+++|.+++-++.+++.-. . .-+... ..|..+.+++ +++.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-~------~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-N------EFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-C------EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-c------EEEccccCchhHHHHHHHhcCCCC
Confidence 3568999999864 5667777776665589999999999999987411 0 000000 1344444433 34589
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~~ 219 (251)
|+|+-... . .+.++. ..+.|+++ |++++-.
T Consensus 265 D~vid~~g-----~-------~~~~~~-~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG-----N-------VSVMRA-ALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----C-------HHHHHH-HHHHhhccCCEEEEEc
Confidence 99985432 1 245666 57899997 9988643
No 320
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.27 E-value=0.028 Score=49.91 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=60.8
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++. ... .++..+-.+++....+.+|+|
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GAD---------EVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TCS---------EEEETTCHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEeccccHHHHHHhhcCCCEE
Confidence 4568999999875 666777887765 4799999999999988863 211 122111123343333579999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+-.... + ..++. ..+.|+++|.++.-
T Consensus 262 id~~g~-----~-------~~~~~-~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 262 LNTVAA-----P-------HNLDD-FTTLLKRDGTMTLV 287 (369)
T ss_dssp EECCSS-----C-------CCHHH-HHTTEEEEEEEEEC
T ss_pred EECCCC-----H-------HHHHH-HHHHhccCCEEEEe
Confidence 865431 1 11345 46889999998754
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.27 E-value=0.01 Score=52.07 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=64.3
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD 177 (251)
.++.+||++|+|+ |.++.++++..+..+|+++|.+++-.+.+++.-. + .+--...|..+.+.+ + +..+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~-~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------D-AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------S-EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------C-EEEcCCCcHHHHHHHHhCCCCCe
Confidence 4568999999865 6667777776445799999999999999987521 0 110011233343332 2 34799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+-... . .+.++. ..+.|+++|+++.-.
T Consensus 242 ~v~d~~G-----~-------~~~~~~-~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVG-----A-------QSTIDT-AQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEC
Confidence 9986532 1 245666 578999999988643
No 322
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.24 E-value=0.016 Score=50.49 Aligned_cols=121 Identities=14% Similarity=0.181 Sum_probs=81.0
Q ss_pred eEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025534 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (251)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D~~ 184 (251)
+|++|-||.|++..-+.+. +..-+.++|+|+..++..+.+++ -+++.+|..+.-...-.+.|+|+.-+|
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHS----------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 7999999999998887764 55678899999999999888764 256788987753333357999998887
Q ss_pred CCC-C-C-------CcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCC--CChHHHHHHHHHHHhh
Q 025534 185 DPI-E-G-------GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF--SHTEVFSCIYNTLRQV 241 (251)
Q Consensus 185 ~~~-~-~-------~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~--~~~~~~~~i~~~l~~~ 241 (251)
.+. + . ++...| -.++++. -+.++|.-+++=|+ ++.. ...+.+..+++.|.+.
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L-~~~~~r~--i~~~~Pk~~~~ENV--~gl~~~~~~~~~~~i~~~l~~~ 133 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKL-FYEYIRI--LKQKKPIFFLAENV--KGMMAQRHNKAVQEFIQEFDNA 133 (331)
T ss_dssp GGGTEETTEECCTTCGGGHH-HHHHHHH--HHHHCCSEEEEEEC--CGGGGCTTSHHHHHHHHHHHHH
T ss_pred CCCcCCCCCccCCCCchhHH-HHHHHHH--HhccCCeEEEeeee--cccccccccchhhhhhhhhccC
Confidence 321 1 0 111112 2455554 35689986665454 2222 2346778888888765
No 323
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.17 E-value=0.0052 Score=53.87 Aligned_cols=67 Identities=24% Similarity=0.294 Sum_probs=47.1
Q ss_pred CCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcc-cC-------CccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 154 SDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPC-YK-------LYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 154 ~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~p~-~~-------l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
...+.+++++|+++.++.. +++||+|++|||......-. .. -+..+.++. ++++|+|||.++++.+.
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~-~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKV-VNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHH-HHHHCcCCcEEEEEECC
Confidence 3467899999999988753 57899999999853210000 00 023467777 68999999999998653
No 324
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.16 E-value=0.032 Score=49.38 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=62.7
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-E----cchHHHHhc-CC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-I----NDARAELES-RK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-~----~D~~~~l~~-~~ 173 (251)
.+..+||++|+|+ |.++..+++..+..+|++++.+++-.+.+++. ... .++ . .|..+.+.. ..
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GAT---------DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCC---------EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CCc---------eEEeccccchhHHHHHHHHhC
Confidence 3468999999764 55677777776655899999999999998864 110 111 1 233333432 23
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~~ 219 (251)
+.+|+|+-... . .+.++. ..+.|+++ |.++.-.
T Consensus 261 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECVG-----N-------VGVMRN-ALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEEc
Confidence 47999985432 1 244566 57899999 9988643
No 325
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.14 E-value=0.0098 Score=53.32 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=65.2
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch-HHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~-~~~l~~-~-~~~f 176 (251)
.++.+||++|+|+ |.++..+++..+..+|++++.+++-.+.+++. ... -+.....|. .+.++. + ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~-------~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GFE-------TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TCE-------EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCc-------EEcCCCcchHHHHHHHHhCCCCC
Confidence 3568999999876 67788888865645899999999999998864 110 011111232 333332 2 2379
Q ss_pred eEEEEcCCCCCCCC-c-ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGG-P-CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~-p-~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+||-....+.... + ..++...+.++. +.+.|+++|++++-.
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNS-LFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHH-HHHHEEEEEEEECCS
T ss_pred CEEEECCCCccccccccccccccHHHHHH-HHHHHhcCCEEEEec
Confidence 99986543211000 0 000111235666 578899999987543
No 326
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.12 E-value=0.03 Score=49.58 Aligned_cols=96 Identities=9% Similarity=-0.016 Sum_probs=62.7
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-----cchHHHHhc-CC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-----~D~~~~l~~-~~ 173 (251)
.+..+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. ... .++. .|..+.+.+ ++
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GAT---------ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCc---------EEEecccccchHHHHHHHHhC
Confidence 3468999999764 55667777765545899999999999998864 110 1111 234444432 23
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~~ 219 (251)
+.+|+|+-... . .+.++. ..+.|+++ |+++.-.
T Consensus 260 gg~Dvvid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG-----R-------IETMMN-ALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC-----C-------HHHHHH-HHHHHhcCCCEEEEEc
Confidence 47999985432 1 245566 57899999 9988643
No 327
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.11 E-value=0.043 Score=48.97 Aligned_cols=109 Identities=12% Similarity=0.149 Sum_probs=65.6
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcc-hHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND-ARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D-~~~~l~~-~-~~~f 176 (251)
.++.+||++|+|+ |.++.++++..+..+|+++|.+++-++.+++. .. .-+.....| ..+.+.. + ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-------~~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GF-------EIADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC-------EEEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CC-------cEEccCCcchHHHHHHHHhCCCCC
Confidence 3568999999865 66778888876655899999999999999874 11 001000112 3333332 2 3479
Q ss_pred eEEEEcCCCCCCCCc----ccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGP----CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p----~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+-....+.. .. .......+.++. ..+.|+++|.+++-.
T Consensus 256 Dvvid~~G~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEAR-GHGHEGAKHEAPATVLNS-LMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCB-CSSTTGGGSBCTTHHHHH-HHHHEEEEEEEEECS
T ss_pred CEEEECCCCccc-ccccccccccchHHHHHH-HHHHHhcCCEEEEec
Confidence 999865432110 00 001112245666 578999999987643
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.09 E-value=0.0076 Score=52.02 Aligned_cols=66 Identities=23% Similarity=0.148 Sum_probs=43.7
Q ss_pred CCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCC---cccCC--------c---cHHHHHHHHcccCCCCcEEEEe
Q 025534 154 SDPRLELVINDARAELESR-KESYDVIIGDLADPIEGG---PCYKL--------Y---TKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 154 ~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~---p~~~l--------~---~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
...+++++++|++++++.. +++||+|++|||...... ....+ + -.+++++ +.++|+|||.++++
T Consensus 18 ~~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~-~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 18 SFGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWRE-VFRLLVPGGRLVIV 96 (297)
T ss_dssp ---CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred cccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHH-HHHHcCCCcEEEEE
Confidence 4467899999999988653 478999999998532100 00000 0 1245667 68999999999988
Q ss_pred cC
Q 025534 219 AG 220 (251)
Q Consensus 219 ~~ 220 (251)
.+
T Consensus 97 ~~ 98 (297)
T 2zig_A 97 VG 98 (297)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.09 E-value=0.034 Score=49.21 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=62.3
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-----cchHHHHhc-CC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-----~D~~~~l~~-~~ 173 (251)
.+..+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. . .++. .|..+.+.+ +.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~---------~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-T---------DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-S---------EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-c---------EEEccccccchHHHHHHHHhC
Confidence 3468999999764 5567777777665589999999999998886411 0 1111 233444432 23
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEe
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQ 218 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~ 218 (251)
+.+|+|+-... . .+.++. ..+.|+++ |++++-
T Consensus 264 ~g~Dvvid~~G-----~-------~~~~~~-~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG-----T-------AQTLKA-AVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC-----C-------HHHHHH-HHHHhhcCCCEEEEE
Confidence 47999985432 1 245666 57899999 998764
No 330
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.06 E-value=0.033 Score=48.88 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=61.8
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-cchHHHHhc-C----C
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-R----K 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-~D~~~~l~~-~----~ 173 (251)
.++.+||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.... .|..+-+.. . .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 4568999999865 556777777666 469999999999999886421 00011100 233333322 2 3
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.+|+|+.... . ...++. ..+.|+++|.++.-.
T Consensus 239 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG-----N-------EKCITI-GINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 57999986532 1 134566 578899999988643
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.98 E-value=0.047 Score=48.26 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=62.7
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-----cchHHHHhc-CC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-----~D~~~~l~~-~~ 173 (251)
.+..+||++|+|+ |..+..+++..+..+|++++.+++-.+.+++. ... .++. .|..+.+.+ .+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT---------ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc---------eEecccccchhHHHHHHHHhC
Confidence 3568999999765 55677777776655899999999999988864 110 1111 233444432 23
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~~ 219 (251)
+.+|+|+-... . .+.++. ..+.|+++ |.++.-.
T Consensus 260 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIG-----R-------LDTMVT-ALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEec
Confidence 47999985532 1 244566 57889999 9988643
No 332
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.95 E-value=0.04 Score=41.75 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=59.7
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~-~~~fD 177 (251)
..+|+++|+|.=+ ++..|.+. + .+|+++|.|++.++.+++. .+.++.+|+.+ .+... -+..|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g-~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-D-IPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-CCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCC
Confidence 3689999997532 34444443 3 5899999999998877752 45678888753 34332 26799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++..++.. ....... ..+.+.|+..++...
T Consensus 74 ~vi~~~~~~~--------~n~~~~~--~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 74 WLILTIPNGY--------EAGEIVA--SARAKNPDIEIIARA 105 (140)
T ss_dssp EEEECCSCHH--------HHHHHHH--HHHHHCSSSEEEEEE
T ss_pred EEEEECCChH--------HHHHHHH--HHHHHCCCCeEEEEE
Confidence 9998765321 0111222 245677888777654
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.93 E-value=0.043 Score=48.47 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=62.5
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-----cchHHHHhc-CC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-----NDARAELES-RK 173 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-----~D~~~~l~~-~~ 173 (251)
.++.+||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. ... .++. .|..+.+.+ ..
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GAT---------ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc---------eEeccccccccHHHHHHHHhC
Confidence 3468999999764 55667777765545899999999999988864 210 1111 233444432 23
Q ss_pred CceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCC-cEEEEec
Q 025534 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pg-G~l~~~~ 219 (251)
+.+|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 259 ~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIG-----N-------VKVMRA-ALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC-----c-------HHHHHH-HHHhhccCCcEEEEEe
Confidence 47999985432 1 244566 57899999 9988643
No 334
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.92 E-value=0.038 Score=48.22 Aligned_cols=99 Identities=17% Similarity=0.133 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCchH-HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025534 101 PNPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD 177 (251)
.++.+||++|+|+++ ++..+++.....+|++++.+++-.+++++.-.. .-+.....|..+.+.+ + +..+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------VTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------EEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------EEEeCCCCCHHHHhhhhcCCCCce
Confidence 456899999998754 455556544457999999999988888875321 1122223455555543 2 34688
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.++.+.. . .+.+.. ..+.|+++|.+++..
T Consensus 235 ~~~~~~~-----~-------~~~~~~-~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAV-----A-------RIAFEQ-AVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCS-----C-------HHHHHH-HHHTEEEEEEEEECC
T ss_pred EEEEecc-----C-------cchhhe-eheeecCCceEEEEe
Confidence 8887643 1 244555 578899999987644
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.88 E-value=0.049 Score=48.04 Aligned_cols=94 Identities=12% Similarity=0.111 Sum_probs=61.5
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE---cchHHHHhc--CCC
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES--RKE 174 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~---~D~~~~l~~--~~~ 174 (251)
.++.+||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++. +.. .++. .|..+.+.. .+.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFAL-GAD---------HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHc-CCC---------EEEcCCcccHHHHHHHHhCCC
Confidence 3568999999765 556777777766 4899999999999998874 210 1111 233444432 234
Q ss_pred ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 175 ~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.+|+|+-... .. .++. ..+.|+++|.++.-.
T Consensus 257 g~D~vid~~g-----~~--------~~~~-~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-----GA--------GLGQ-SLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-----SS--------CHHH-HHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-----hH--------HHHH-HHHHhhcCCEEEEEe
Confidence 7999986542 11 1344 467899999988654
No 336
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.85 E-value=0.021 Score=50.25 Aligned_cols=125 Identities=15% Similarity=0.177 Sum_probs=75.9
Q ss_pred CCCeEEEEecCchHHHHHHHhcC-CCcEE-EEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025534 102 NPKTIFIMGGGEGSTAREILRHK-TVEKV-VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~-~~~~v-~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD 177 (251)
.+-+|+++.||.|++...+.+.. +...+ .++|+|+..++..+.+++.. ++.+|..+.-.. ....+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45689999999999998887752 12456 79999999999999987521 344555443211 112699
Q ss_pred EEEEcCCCCCC----CCcccCCc------cHHHHH-HHHcccC--CCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 178 VIIGDLADPIE----GGPCYKLY------TKSFYE-FVVKPRL--NPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 178 ~Ii~D~~~~~~----~~p~~~l~------~~ef~~-~~~~~~L--~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+|+..+|.... .+....+. -.++++ . -+.+ +|.-+++=|+ ++ +.....+..+++.|.+.
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~--i~~~~~~P~~~~lENV--~g-l~~~~~~~~i~~~l~~~ 150 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDI--LPYLINKPKHIFIENV--PL-FKESLVFKEIYNILIKN 150 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTT--GGGCSSCCSEEEEEEC--GG-GGGSHHHHHHHHHHHHT
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHH--HHHhccCCCEEEEEch--hh-hcChHHHHHHHHHHHhC
Confidence 99998874321 01100011 123444 2 2345 6776555454 22 23345677788888764
No 337
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.79 E-value=0.023 Score=49.77 Aligned_cols=90 Identities=19% Similarity=0.105 Sum_probs=61.0
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++. +. -.++ .|. +.+ .+.+|+|
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga---------~~v~-~~~-~~~---~~~~D~v 238 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-GV---------KHFY-TDP-KQC---KEELDFI 238 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-TC---------SEEE-SSG-GGC---CSCEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-CC---------Ceec-CCH-HHH---hcCCCEE
Confidence 4578999999875 667778888766 4899999999999988873 21 1222 342 222 2379999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+-....+ +.++. ..+.|+++|+++.-.
T Consensus 239 id~~g~~------------~~~~~-~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH------------YDLKD-YLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC------------CCHHH-HHTTEEEEEEEEECC
T ss_pred EECCCcH------------HHHHH-HHHHHhcCCEEEEEC
Confidence 8543321 12445 578999999998654
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.71 E-value=0.06 Score=47.84 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=61.2
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE------cchHHHHhc-C
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES-R 172 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~------~D~~~~l~~-~ 172 (251)
.++.+||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. .. -.++. .|..+.+++ .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga---------~~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA---------DLTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC---------SEEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC---------cEEEeccccCcchHHHHHHHHh
Confidence 3468999999653 45667777766545999999999999998864 11 01221 233333332 2
Q ss_pred -CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 -KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 -~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+..+|+|+-.... + +.++. ..+.|+++|+++.-.
T Consensus 264 ~g~g~Dvvid~~g~-----~-------~~~~~-~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD-----S-------RALLE-GSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC-----T-------THHHH-HHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC-----H-------HHHHH-HHHHHhcCCEEEEEe
Confidence 2479999865421 1 23455 467899999987643
No 339
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.70 E-value=0.014 Score=51.43 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=58.8
Q ss_pred CeEEEEecCc-hHHH-HHHH-hcCCCcEEEEEECChH---HHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 104 KTIFIMGGGE-GSTA-REIL-RHKTVEKVVMCDIDEE---VVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 104 ~~VL~iG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
.+||++|+|+ |.++ .+++ +..+..+|++++.+++ -.+.+++. ... .+.....|..+ +.+..+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga~-------~v~~~~~~~~~-i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-DAT-------YVDSRQTPVED-VPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-TCE-------EEETTTSCGGG-HHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-CCc-------ccCCCccCHHH-HHHhCCCCC
Confidence 8999999743 5566 7778 7666545999999988 78888764 211 01000123333 322123799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+-... . .+.++. +.+.|+++|+++.-.
T Consensus 245 vvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIYEATG-----F-------PKHAIQ-SVQALAPNGVGALLG 273 (357)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----C-------hHHHHH-HHHHHhcCCEEEEEe
Confidence 9985432 1 134566 578899999988643
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.62 E-value=0.065 Score=46.63 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=63.3
Q ss_pred CCCCeEEEEecCchH-HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025534 101 PNPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD 177 (251)
.++.+||+.|+|+.+ ++..+++..+...+++++.+++-.+++++.=. +.-+.....|..+.++. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCcc
Confidence 456899999987644 56677777666788999999999999987521 01111111333343332 235678
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+-..- . .+.++. ..+.|+++|.+++..
T Consensus 232 ~v~d~~G-----~-------~~~~~~-~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAG-----V-------PQTVEL-AVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSC-----S-------HHHHHH-HHHHCCTTCEEEECC
T ss_pred ccccccc-----c-------cchhhh-hhheecCCeEEEEEe
Confidence 8775431 1 245666 578899999988654
No 341
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.59 E-value=0.012 Score=51.61 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCeEEE-EcchHHHHhcC-CCceeEEEEcCCCCCCCC----ccc-CCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 156 PRLELV-INDARAELESR-KESYDVIIGDLADPIEGG----PCY-KLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 156 ~rv~~~-~~D~~~~l~~~-~~~fD~Ii~D~~~~~~~~----p~~-~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
...+++ ++|++++++.. ++++|+|++|||.....+ ... .-+..+.+.. ++++|+|||.++++...
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~-~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAE-AERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHH-HHHHEEEEEEEEEEECS
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHH-HHHHcCCCeEEEEEcCc
Confidence 457888 99999998764 468999999998533100 000 0023466777 68999999999998753
No 342
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.56 E-value=0.04 Score=48.13 Aligned_cols=94 Identities=11% Similarity=0.048 Sum_probs=60.4
Q ss_pred CCCeEEEEecCc-hHHHHHHHhcC--CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch-HHHHhc--CCCc
Q 025534 102 NPKTIFIMGGGE-GSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES--RKES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~-~~~l~~--~~~~ 175 (251)
++.+||++|+|+ |.++.++++.. + .+|++++.+++-.+.+++. .. -.++..+- .+++.. .+..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga---------~~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GA---------DYVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TC---------SEEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CC---------CEEeccccchHHHHHhhcCCC
Confidence 568999999864 55667777765 5 5799999999999988873 21 01221111 122221 1347
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+|+-... . .+.++. ..+.|+++|.++.-.
T Consensus 239 ~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG-----T-------EETTYN-LGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred ccEEEECCC-----C-------hHHHHH-HHHHhhcCCEEEEeC
Confidence 999986532 1 234566 578899999988643
No 343
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.56 E-value=0.019 Score=45.87 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=58.3
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
.++++||+.|+ |.|..+..+++..+ .+|++++.+++..+.+++. .. +..+.....|..+.+.+ . ...+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 35688999995 33445555555444 5899999999988877653 10 00011111233333322 2 2469
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+... ++ +.++. +.+.|+++|+++.-.
T Consensus 109 D~vi~~~------g~-------~~~~~-~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSL------AG-------EAIQR-GVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECC------CT-------HHHHH-HHHTEEEEEEEEECS
T ss_pred eEEEECC------ch-------HHHHH-HHHHhccCCEEEEEc
Confidence 9999653 11 34566 578899999988643
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.56 E-value=0.023 Score=51.04 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=61.1
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD 177 (251)
.++.+||++|+|+ |.++.++++..+..+|++++.+++-.+++++.-... -+.....|..+.+.+ + +..+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH-------VIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EEcCCCCCHHHHHHHHhCCCCCC
Confidence 3468999999864 556777777766559999999999999998752100 000001344444433 2 34799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHH---HHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEF---VVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~---~~~~~L~pgG~l~~~~ 219 (251)
+|+-... .+ ...+.. ++.+.++++|++++-.
T Consensus 285 ~vid~~g-----~~------~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATG-----VP------QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSS-----CH------HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCC-----Cc------HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9985432 11 013333 1234449999998643
No 345
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.49 E-value=0.027 Score=48.98 Aligned_cols=97 Identities=24% Similarity=0.232 Sum_probs=61.8
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 177 (251)
.++++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+.+.+... .-+.....|..+.+.+ ..+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGFD------GAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCCS------EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCC------EEEECCCHHHHHHHHHhcCCCce
Confidence 45689999998 34556677777666 49999999999888883333211 0011111344444432 345799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|+.... . +.++. ..+.|+++|.++.-
T Consensus 221 ~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVG------G-------EILDT-VLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSC------H-------HHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC------c-------chHHH-HHHHHhhCCEEEEE
Confidence 9986532 1 34566 57899999998864
No 346
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.43 E-value=0.18 Score=43.77 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=58.4
Q ss_pred CCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH-HHhcCCCceeEE
Q 025534 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDVI 179 (251)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~-~l~~~~~~fD~I 179 (251)
..+|.+||+|. +.++..+.+.....+|+++|.+++.++.+++. +. +.-...|..+ .+ ...|+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~---------~~~~~~~~~~~~~----~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI---------IDEGTTSIAKVED----FSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS---------CSEEESCTTGGGG----GCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC---------cchhcCCHHHHhh----ccCCEE
Confidence 47899999985 33555665543223899999999988877653 10 1112234333 22 358999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
|+..+.. ...+.++. +...|+++.+++-
T Consensus 99 ilavp~~---------~~~~vl~~-l~~~l~~~~iv~d 126 (314)
T 3ggo_A 99 MLSSPVR---------TFREIAKK-LSYILSEDATVTD 126 (314)
T ss_dssp EECSCGG---------GHHHHHHH-HHHHSCTTCEEEE
T ss_pred EEeCCHH---------HHHHHHHH-HhhccCCCcEEEE
Confidence 9986521 13567788 6888998876654
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.37 E-value=0.053 Score=47.74 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchH-HHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR-AELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~-~~l~~~~~~fD~ 178 (251)
.++.+||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++. ... .++..+-. ++.....+.+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga~---------~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GAD---------HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TCS---------EEEEGGGTSCHHHHSCSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CCC---------EEEcCcCchHHHHHhhcCCCE
Confidence 3568999999854 556677777655 4799999999988888873 210 12211101 222222257999
Q ss_pred EEEcCCC--CCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLAD--PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~--~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+..... +. .++. +.+.|+++|+++.-
T Consensus 247 vid~~g~~~~~------------~~~~-~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSLTDI------------DFNI-MPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCSTTC------------CTTT-GGGGEEEEEEEEEC
T ss_pred EEECCCCCcHH------------HHHH-HHHHhcCCCEEEEe
Confidence 9865432 11 1223 46789999988754
No 348
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.31 E-value=0.024 Score=49.53 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=61.3
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.+....+|+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~------~~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GAD------LVVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TCS------EEECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CCC------EEecCCCccHHHHHHHHhCCCCEE
Confidence 4568999999853 566777777666 4999999999999988763 210 000000123333332211479999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.... . .+.++. ..+.|+++|.++.-.
T Consensus 235 id~~g-----~-------~~~~~~-~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 235 VVTAV-----S-------KPAFQS-AYNSIRRGGACVLVG 261 (339)
T ss_dssp EESSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EECCC-----C-------HHHHHH-HHHHhhcCCEEEEec
Confidence 86542 1 134566 567899999887543
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.29 E-value=0.02 Score=50.14 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=62.0
Q ss_pred CCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCceeE
Q 025534 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD~ 178 (251)
++.+||++|+|+ |..+..+++..+..+|++++.+++-.+.+++. ... .-+.....|..+.+.+ + ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~------~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GAD------YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCS------EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCC------EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 568999999854 55667777766644899999999999988864 210 0000001244444432 2 347999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+.... . .+.++. +.+.|+++|+++.-.
T Consensus 240 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG-----A-------PKALEQ-GLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEc
Confidence 986532 1 244566 578899999987643
No 350
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.26 E-value=0.026 Score=48.87 Aligned_cols=74 Identities=11% Similarity=0.162 Sum_probs=55.8
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcE--EEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC---CCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEK--VVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~---~~~f 176 (251)
.+-+|+++-||.|++...+.+. +... |.++|+|+..++..+.+++ ...++.+|..++.... ...+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 4568999999999999888775 4333 6899999999998887753 3467788887653221 1469
Q ss_pred eEEEEcCCC
Q 025534 177 DVIIGDLAD 185 (251)
Q Consensus 177 D~Ii~D~~~ 185 (251)
|+|+..+|.
T Consensus 85 Dll~ggpPC 93 (295)
T 2qrv_A 85 DLVIGGSPC 93 (295)
T ss_dssp SEEEECCCC
T ss_pred CEEEecCCC
Confidence 999999873
No 351
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.11 E-value=0.014 Score=51.12 Aligned_cols=96 Identities=17% Similarity=0.220 Sum_probs=60.7
Q ss_pred CCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025534 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~I 179 (251)
++.+||++|+|+ |..+..+++..+..+|++++.+++-.+.+++. ... .. +.+ ..|..+.+.+ +...+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~-~~~----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LV-NPL----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EE-CTT----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--cc-CcC----ccCHHHHHHHhcCCCCCEE
Confidence 568999999854 55667777766544899999999888877764 210 00 000 1233333322 24579999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+.... . .+.++. ..+.|+++|+++.-
T Consensus 236 id~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LEFSG-----N-------EAAIHQ-GLMALIPGGEARIL 261 (343)
T ss_dssp EECSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHHhcCCEEEEE
Confidence 86532 1 234566 57789999988764
No 352
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.08 E-value=0.077 Score=46.64 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=58.3
Q ss_pred CCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++.+||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++.+... .+ +...| .+.+.+..+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~-------~v-i~~~~-~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGAD-------DY-VIGSD-QAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCS-------CE-EETTC-HHHHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCc-------ee-ecccc-HHHHHHhcCCCCEEE
Confidence 568999999753 345566676655 48999999998888887444311 11 11122 233433335799998
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
-....+. .++. ..+.|+++|+++.-.
T Consensus 250 d~~g~~~------------~~~~-~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 250 DTVPVHH------------ALEP-YLSLLKLDGKLILMG 275 (357)
T ss_dssp ECCCSCC------------CSHH-HHTTEEEEEEEEECS
T ss_pred ECCCChH------------HHHH-HHHHhccCCEEEEeC
Confidence 6543211 1234 467899999988643
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.96 E-value=0.065 Score=47.31 Aligned_cols=96 Identities=23% Similarity=0.281 Sum_probs=61.2
Q ss_pred CCCeEEEEe-c-CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025534 102 NPKTIFIMG-G-GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG-~-G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 178 (251)
++.+||++| + |.|.++..+++.....+|++++.+++-.+.+++. +... .. +. ..|..+.+.+ ..+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi-~~-----~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VI-DH-----SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EE-CT-----TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EE-eC-----CCCHHHHHHHhcCCCceE
Confidence 456899999 3 3366777888752236999999999999998874 2110 00 01 1234444443 2467998
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+-... ..+.++. +.+.|+++|+++.-
T Consensus 243 vid~~g------------~~~~~~~-~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------------TDKHAAE-IADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------------HHHHHHH-HHHHSCTTCEEEEC
T ss_pred EEECCC------------chhhHHH-HHHHhcCCCEEEEE
Confidence 885431 1245666 57899999999864
No 354
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.84 E-value=0.035 Score=47.88 Aligned_cols=88 Identities=14% Similarity=0.240 Sum_probs=56.5
Q ss_pred CCCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.++.+||++|+|+ |.++.++++..+. +|++++ +++-.+.+++. +.. .++ .| .+-+ ++.+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-Ga~---------~v~-~d-~~~v---~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-GVR---------HLY-RE-PSQV---TQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-TEE---------EEE-SS-GGGC---CSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-CCC---------EEE-cC-HHHh---CCCccEE
Confidence 3568999999953 5677788887664 999999 88888888874 211 122 24 2222 5789998
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+-.... + . ... ..+.|+++|+++.-.
T Consensus 204 ~d~~g~-----~-------~-~~~-~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 204 FDAVNS-----Q-------N-AAA-LVPSLKANGHIICIQ 229 (315)
T ss_dssp ECC--------------------T-TGGGEEEEEEEEEEC
T ss_pred EECCCc-----h-------h-HHH-HHHHhcCCCEEEEEe
Confidence 843321 1 1 133 467899999988653
No 355
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.80 E-value=0.11 Score=45.73 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
++.+||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++.+... .-+-..| .+.+.+..+.+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~--------~v~~~~~-~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGAD--------SFLVSRD-QEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCS--------EEEETTC-HHHHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCc--------eEEeccC-HHHHHHhhCCCCEEE
Confidence 568999999753 445666677666 48999999998888777443311 1111122 233433335799998
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
.....+. . ++. ..+.|+++|.++.-
T Consensus 257 d~~g~~~-------~-----~~~-~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVH-------P-----LLP-LFGLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCC-------C-----SHH-HHHHEEEEEEEEEC
T ss_pred ECCCcHH-------H-----HHH-HHHHHhcCCEEEEE
Confidence 6543211 1 123 34678899988754
No 356
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.72 E-value=0.074 Score=46.13 Aligned_cols=97 Identities=18% Similarity=0.258 Sum_probs=59.9
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE-cchHHHHhc-CCCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~-~D~~~~l~~-~~~~f 176 (251)
.+.++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... ..+.... .|..+.+.. ..+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~~------~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GFD------AAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CCc------EEEecCCHHHHHHHHHHHhCCCC
Confidence 34688999997 34445556666555 4899999999988888553 210 0011101 334444432 23579
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+++.... . +.++. ..+.|+++|.+++-.
T Consensus 216 d~vi~~~g------~-------~~~~~-~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG------G-------EFLNT-VLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC------H-------HHHHH-HHTTEEEEEEEEECC
T ss_pred eEEEECCC------h-------HHHHH-HHHHHhcCCEEEEEe
Confidence 99987642 1 23566 578999999987643
No 357
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.70 E-value=0.062 Score=47.41 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCeEEEEecCc-hHHHHHHHhcCCCcEEEEEECCh---HHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 103 PKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 103 ~~~VL~iG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
+++||++|+|+ |..+..+++..+. +|++++.++ +-.+.+++. ... .+. ..|..+.+.+....+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~-ga~-------~v~--~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET-KTN-------YYN--SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH-TCE-------EEE--CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh-CCc-------eec--hHHHHHHHHHhCCCCCE
Confidence 78999999832 3345566665554 999999998 777887763 211 111 01222233222257999
Q ss_pred EEEcCCCCCCCCcccCCccHHHH-HHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFY-EFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~-~~~~~~~L~pgG~l~~~~ 219 (251)
|+..... + ..+ +. +.+.|+++|.++.-.
T Consensus 250 vid~~g~-----~-------~~~~~~-~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA-----D-------VNILGN-VIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC-----C-------THHHHH-HGGGEEEEEEEEECS
T ss_pred EEECCCC-----h-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 9876431 1 134 56 578899999987643
No 358
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.61 E-value=0.17 Score=44.08 Aligned_cols=98 Identities=15% Similarity=0.065 Sum_probs=61.1
Q ss_pred CCCCeEEEEecC--chHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-EcchHHHHhc-CCCce
Q 025534 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELES-RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-~~D~~~~l~~-~~~~f 176 (251)
.+.++||++|++ .|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.+. ..|..+.+.+ ..+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 346889999983 4555666666555 5899999999888888763 11 0001100 1234444432 12379
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+.... . .+.++. +.+.|+++|.++.-.
T Consensus 240 D~vi~~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSV-----S-------EAAIEA-STRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSS-----C-------HHHHHH-HTTSEEEEEEEEECC
T ss_pred CEEEECCC-----c-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 99987642 1 245677 688999999987543
No 359
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.54 E-value=0.15 Score=45.64 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=31.0
Q ss_pred CCCeEEEEecCchHH-HHHHHhcCCCcEEEEEECChHHHHHHHh
Q 025534 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKS 144 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~ 144 (251)
++.+|++||+|.=+. +..+++..+ .+|+++|.++...+.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH
Confidence 568999999985443 333444345 489999999998888776
No 360
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.54 E-value=0.038 Score=48.25 Aligned_cols=64 Identities=16% Similarity=0.091 Sum_probs=51.1
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHh
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE 170 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~ 170 (251)
..++.-|||..||+|+++..+.+.. .+.+++|+++..++.+++++.... .....+.+|+++...
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~-----~~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDNN-----ISEEKITDIYNRILN 313 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSC-----SCHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcc-----cchHHHHHHHHHHHc
Confidence 3456789999999999999988863 689999999999999999876432 246667778777653
No 361
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.52 E-value=0.14 Score=43.67 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=58.4
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch-HHHHhcCCCcee
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELESRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~-~~~l~~~~~~fD 177 (251)
.++++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. . .++..+- .++.... +.+|
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga--------~-~~~~~~~~~~~~~~~-~~~d 191 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA--------E-EAATYAEVPERAKAW-GGLD 191 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC--------S-EEEEGGGHHHHHHHT-TSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC--------C-EEEECCcchhHHHHh-cCce
Confidence 45689999997 34556677777666 4899999999888888763 11 1 1222111 2233222 5799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|+. ... + .++. ..+.|+++|.++.-
T Consensus 192 ~vid-~g~-----~--------~~~~-~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 192 LVLE-VRG-----K--------EVEE-SLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEE-CSC-----T--------THHH-HHTTEEEEEEEEEC
T ss_pred EEEE-CCH-----H--------HHHH-HHHhhccCCEEEEE
Confidence 9986 431 1 1355 57889999998754
No 362
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.46 E-value=0.043 Score=47.89 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=60.9
Q ss_pred CCCCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
.++++||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.+ + ...+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-ga~------~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRL-GAA------YVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhC-CCc------EEEeCCcccHHHHHHHHhCCCCC
Confidence 4568999999874 556777777655 4899999999988888874 210 0011111344444432 2 3579
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+.... .+ .+.+. .+.|+++|+++.-.
T Consensus 215 Dvvid~~g-----~~-------~~~~~--~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIG-----GP-------DGNEL--AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSC-----HH-------HHHHH--HHTEEEEEEEEECC
T ss_pred cEEEECCC-----Ch-------hHHHH--HHHhcCCCEEEEEe
Confidence 99986532 11 22333 37899999998654
No 363
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.42 E-value=0.31 Score=43.33 Aligned_cols=96 Identities=19% Similarity=0.335 Sum_probs=56.2
Q ss_pred CCCeEEEEecCchH-HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE---cchHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~---~D~~~~l~~~~~~fD 177 (251)
.+++|+++|+|.=+ .+...++..+ .+|+++|.+++-.+.+++.+.. .+.... .|..+.+ ...|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l----~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV----KRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH----cCCC
Confidence 46899999985433 2233334445 4899999999988877764431 122221 2233333 3689
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+|+.....|.. ....+.+.+. .+.++|||+++-
T Consensus 234 vVi~~~~~p~~--~t~~li~~~~-----l~~mk~g~~iV~ 266 (377)
T 2vhw_A 234 LVIGAVLVPGA--KAPKLVSNSL-----VAHMKPGAVLVD 266 (377)
T ss_dssp EEEECCCCTTS--CCCCCBCHHH-----HTTSCTTCEEEE
T ss_pred EEEECCCcCCC--CCcceecHHH-----HhcCCCCcEEEE
Confidence 99986543321 1124444432 456789998763
No 364
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.31 E-value=0.18 Score=39.52 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=66.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcC----CCce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----~~~f 176 (251)
.-+.-||++|.|.|-+-.++....+..+|.++|-. .+.|-.. ..|.-+++.+|+++.+... +.+-
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~------~~~hp~~-----~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERA------VASHPDS-----TPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESS------CCCCGGG-----CCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEee------eccCCCC-----CCchHheecccHHHHHHHHHHhcCCce
Confidence 34577999999999999888887667899999862 1222111 2356689999999988653 4455
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
-++=.|.-.. .+.....+...+.-.+..+|+|||+++-
T Consensus 108 ~LaHaD~G~g---~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 108 SLVHADLGGH---NREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEEECCCCS---CHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEeecCCC---CcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 5555565322 1111122223333335799999998874
No 365
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.29 E-value=0.082 Score=46.01 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=60.8
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE---cchHHHHhc-CCC
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES-RKE 174 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~---~D~~~~l~~-~~~ 174 (251)
.++++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++.+... ..+-. .|..+.+.. .++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~--------~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFD--------DAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCS--------EEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCc--------eEEecCCHHHHHHHHHHHhCC
Confidence 34688999997 44556667777655 58999999999888887433211 11111 133344432 235
Q ss_pred ceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 175 ~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
.+|+|+.... .+.++. ..+.|+++|.+++-
T Consensus 225 ~~d~vi~~~g-------------~~~~~~-~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVG-------------GKMLDA-VLVNMNMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSC-------------HHHHHH-HHTTEEEEEEEEEC
T ss_pred CCcEEEECCC-------------HHHHHH-HHHHHhcCCEEEEE
Confidence 7999986642 124566 57899999998864
No 366
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.28 E-value=0.1 Score=46.05 Aligned_cols=97 Identities=18% Similarity=0.307 Sum_probs=62.4
Q ss_pred CCCCeEEEEe--cCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025534 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 177 (251)
.++++||++| +|.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.++. ..+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga~------~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GCD------RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CCc------EEEecCChhHHHHHHHhcCCCCC
Confidence 4568999999 566777788888766 4899999999988888873 210 0000001233343432 245799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+.... . +.++. +.+.|+++|.++.-.
T Consensus 234 ~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG-----G--------AMFDL-AVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC-----T--------HHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----H--------HHHHH-HHHHHhcCCEEEEEe
Confidence 9986532 1 24555 567899999988643
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.22 E-value=0.12 Score=45.19 Aligned_cols=96 Identities=21% Similarity=0.349 Sum_probs=61.0
Q ss_pred CCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025534 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 178 (251)
++.+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .... .. +.+ .|..+.+.+ ..+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~~-vi-~~~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKM-GADI-VL-NHK-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHH-TCSE-EE-CTT-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CCcE-EE-ECC-----ccHHHHHHHhCCCCccE
Confidence 5689999963 33556677777766 4999999999999998874 2110 00 011 233333332 3457999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+-... ....++. +.+.|+++|.++...
T Consensus 221 v~d~~g------------~~~~~~~-~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN------------TDMYYDD-MIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC------------HHHHHHH-HHHHEEEEEEEEESS
T ss_pred EEECCC------------chHHHHH-HHHHhccCCEEEEEC
Confidence 986431 1245566 578999999997543
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.22 E-value=0.1 Score=45.52 Aligned_cols=95 Identities=21% Similarity=0.309 Sum_probs=61.0
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
..+++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+... .|..+.+.+ . ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSV-GA------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 35689999997 44567777777766 4999999999988888874 11 1001111 344444433 2 3479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+|+..... + .++. ..+.|+++|.++.-
T Consensus 229 Dvvid~~g~-----~--------~~~~-~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGG-----P--------AFDD-AVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC---------------CHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCch-----h--------HHHH-HHHhhcCCCEEEEE
Confidence 999865431 1 2345 46789999998864
No 369
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.21 E-value=0.066 Score=46.82 Aligned_cols=98 Identities=21% Similarity=0.312 Sum_probs=60.0
Q ss_pred CCCCeEEEEecCch--HHHHHHHhcC-CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CC-Cc
Q 025534 101 PNPKTIFIMGGGEG--STAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RK-ES 175 (251)
Q Consensus 101 ~~~~~VL~iG~G~G--~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~-~~ 175 (251)
.+.++||++|+|+| ..+..+++.. + .+|++++.+++-.+.+++. ... .-+.....|..+.+.+ .. +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~-g~~------~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA-GAD------YVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh-CCC------EEecCCCccHHHHHHHHhcCCC
Confidence 35689999999744 3555666654 5 5899999999998888763 210 0000001232222322 22 47
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+|+.... . .+.++. ..+.|+++|.++.-.
T Consensus 241 ~d~vi~~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 241 VDAVIDLNN-----S-------EKTLSV-YPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEEESCC-----C-------HHHHTT-GGGGEEEEEEEEECC
T ss_pred ceEEEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEC
Confidence 999987642 1 134556 578999999988643
No 370
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.12 E-value=0.091 Score=47.41 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=40.0
Q ss_pred CCCCeEEEEecCchHHHHHHH-hcCC-CcEEEEEECChHHHHHHHhchhc
Q 025534 101 PNPKTIFIMGGGEGSTAREIL-RHKT-VEKVVMCDIDEEVVEFCKSYLVV 148 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~a~~~~~~ 148 (251)
.++..|+|+|++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 355789999999999998877 4433 36999999999999999998765
No 371
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.11 E-value=0.37 Score=42.56 Aligned_cols=97 Identities=21% Similarity=0.342 Sum_probs=56.9
Q ss_pred CCCeEEEEecCchH-HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc---chHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN---DARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~---D~~~~l~~~~~~fD 177 (251)
++++||++|+|.=+ .+..+++..+. +|+++|.+++-.+.+++.+.. .+..+.. |..+.+ ..+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~----~~~D 232 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV----AEAD 232 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH----HTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH----cCCC
Confidence 45899999985433 23344444554 899999999988887765431 1222322 222333 2699
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+||.....+. .+...+.+.+ ..+.++++|+++.-
T Consensus 233 vVI~~~~~~~--~~~~~li~~~-----~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 233 LLIGAVLVPG--RRAPILVPAS-----LVEQMRTGSVIVDV 266 (361)
T ss_dssp EEEECCCCTT--SSCCCCBCHH-----HHTTSCTTCEEEET
T ss_pred EEEECCCcCC--CCCCeecCHH-----HHhhCCCCCEEEEE
Confidence 9987665332 1112333433 24568899987743
No 372
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.09 E-value=0.17 Score=38.81 Aligned_cols=99 Identities=20% Similarity=0.131 Sum_probs=54.8
Q ss_pred CCCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchH--HHHhcC-CCc
Q 025534 101 PNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR-KES 175 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~-~~~ 175 (251)
....+|+++|+|.=+ ++..+.+ .+ .+|+++|.+++.++.+++ .....++.+|.. +.+... -+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~-~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS-SG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCccc
Confidence 356799999986533 2233333 34 489999999876543331 123445556642 233332 257
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
+|+|+.....+. ....... +.+.+.+...++.....
T Consensus 85 ad~Vi~~~~~~~---------~~~~~~~-~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDS---------TNFFISM-NARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHH---------HHHHHHH-HHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcH---------HHHHHHH-HHHHHCCCCeEEEEECC
Confidence 999998754311 1122233 24455666677766543
No 373
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.08 E-value=0.095 Score=45.94 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=59.9
Q ss_pred CCC--CeEEEEecC--chHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCc
Q 025534 101 PNP--KTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKES 175 (251)
Q Consensus 101 ~~~--~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~ 175 (251)
.+. ++||+.|++ .|..+..+++..+..+|++++.+++-.+.+++.+... .-+.....|..+.+.+ ..+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~------~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD------AAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS------EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc------eEEecCchHHHHHHHHhcCCC
Confidence 345 899999973 3445566666555448999999998888887633211 0001001233333332 2337
Q ss_pred eeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|+++...- . +.++. ..+.|+++|+++.-
T Consensus 231 ~d~vi~~~G------~-------~~~~~-~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 231 VDVYFDNVG------G-------NISDT-VISQMNENSHIILC 259 (357)
T ss_dssp EEEEEESCC------H-------HHHHH-HHHTEEEEEEEEEC
T ss_pred CCEEEECCC------H-------HHHHH-HHHHhccCcEEEEE
Confidence 999987642 1 34566 57899999998864
No 374
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.05 E-value=0.36 Score=35.98 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=45.9
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~-~~~fD 177 (251)
.++|+++|+|.=+ ++..|.+. + .+|+++|.|++.++.+++. .++++.+|+.+ .+... -+.+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g-~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-G-KKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-CeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCC
Confidence 3689999996522 33444443 3 5899999999988877642 35677777653 34332 35799
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
+|++..+
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998754
No 375
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.04 E-value=0.17 Score=45.71 Aligned_cols=43 Identities=26% Similarity=0.288 Sum_probs=32.2
Q ss_pred CCCeEEEEecCchHH-HHHHHhcCCCcEEEEEECChHHHHHHHhc
Q 025534 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (251)
.+.+|++||+|.-+. +..+++..+ .+|+++|.++...+.+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~ 232 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASL 232 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc
Confidence 468999999985443 344455455 5899999999988888763
No 376
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.02 E-value=0.062 Score=46.55 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=61.3
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
.++++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+ . +..+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHhCCCCc
Confidence 34689999994 44556677777655 489999999999998886411 00011111344444433 2 3579
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+..... +.++. ..+.|+++|.++.-.
T Consensus 211 Dvvid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-------------DTWLT-SLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-------------GGHHH-HHTTEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhcCCCEEEEEe
Confidence 999865321 23455 578999999998654
No 377
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.02 E-value=0.058 Score=46.88 Aligned_cols=97 Identities=14% Similarity=0.269 Sum_probs=61.3
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
.++++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-. . .-+.....|..+.+.+ . +..+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-~------~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGA-E------YLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-S------EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-c------EEEeCCCchHHHHHHHHhCCCCc
Confidence 35689999994 44556677777666 589999999999998887411 0 0011111344444433 2 3579
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+..... +.++. +.+.|+++|+++.-.
T Consensus 219 D~vid~~g~-------------~~~~~-~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK-------------DTFEI-SLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG-------------GGHHH-HHHHEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhccCCEEEEEc
Confidence 999865421 22455 467899999988643
No 378
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.79 E-value=0.2 Score=45.26 Aligned_cols=94 Identities=24% Similarity=0.296 Sum_probs=61.4
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~-~~~fD 177 (251)
..+|+++|+|--+ +++.|.+. + ..|++||.|++.++.+++. .+.++.+|+.+ .++.. -++.|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g-~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-G-VKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-CCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-CCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccC
Confidence 4679999997633 33444443 3 5899999999999988753 35678888865 34443 36899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++...++. ....... ..+.+.|+..+++..
T Consensus 71 ~viv~~~~~~---------~n~~i~~-~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 71 VLINAIDDPQ---------TNLQLTE-MVKEHFPHLQIIARA 102 (413)
T ss_dssp EEEECCSSHH---------HHHHHHH-HHHHHCTTCEEEEEE
T ss_pred EEEECCCChH---------HHHHHHH-HHHHhCCCCeEEEEE
Confidence 9998765321 1122223 356788887777654
No 379
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.73 E-value=0.16 Score=43.97 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=59.9
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~f 176 (251)
.+.++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 34688999995 55666777777655 5899999999888888763 21 00001001233333322 13479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+..... +.++. +.+.|+++|.++.-.
T Consensus 216 d~vi~~~g~-------------~~~~~-~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-------------DTLQK-SLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-------------TTHHH-HHHTEEEEEEEEECC
T ss_pred eEEEECCcH-------------HHHHH-HHHhhccCCEEEEEe
Confidence 999966421 12455 467899999987643
No 380
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.54 E-value=0.49 Score=41.84 Aligned_cols=96 Identities=19% Similarity=0.342 Sum_probs=53.1
Q ss_pred CCCeEEEEecCchH-HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcc---hHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND---ARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D---~~~~l~~~~~~fD 177 (251)
.+++|+++|+|.=+ .+...++..+ .+|+++|.+++-.+.+++.+. ..+.....+ ..+.+ ...|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~----~~~D 231 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV----QHAD 231 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH----hCCC
Confidence 46899999985322 2233333445 489999999988777665332 123332222 22233 3689
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+|+.....+.. ....+.+.+. .+.++++|+++.
T Consensus 232 vVi~~~g~~~~--~~~~li~~~~-----l~~mk~gg~iV~ 264 (369)
T 2eez_A 232 LLIGAVLVPGA--KAPKLVTRDM-----LSLMKEGAVIVD 264 (369)
T ss_dssp EEEECCC---------CCSCHHH-----HTTSCTTCEEEE
T ss_pred EEEECCCCCcc--ccchhHHHHH-----HHhhcCCCEEEE
Confidence 99987653320 1123444432 456788997763
No 381
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.39 E-value=0.59 Score=36.54 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=56.6
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchH--HHHhcC--CCce
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR--KESY 176 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~--~~~f 176 (251)
..+|+++|+|.=+ ++..|.+..+ .+|+++|.|++.++.+++. .++++.+|+. +.+... -+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 4689999986433 2334433303 4799999999988776642 2455666653 234333 3679
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|++..+++. ........ .+.+.|++.++...
T Consensus 107 d~vi~~~~~~~--------~~~~~~~~--~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPHHQ--------GNQTALEQ--LQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSSHH--------HHHHHHHH--HHHTTCCSEEEEEE
T ss_pred CEEEEeCCChH--------HHHHHHHH--HHHHCCCCEEEEEE
Confidence 99998654311 11223333 35567777777654
No 382
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.34 E-value=0.098 Score=45.21 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=58.6
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
...++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.+ . ...+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~~------~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GAW------QVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCC------EEEECCCccHHHHHHHHhCCCCc
Confidence 34688999994 44445556666545 4899999999988888763 210 0000001233333322 2 3479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+.... + +.++. +.+.|+++|.++.-.
T Consensus 211 D~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG------R-------DTWER-SLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC------G-------GGHHH-HHHTEEEEEEEEECC
T ss_pred eEEEECCc------h-------HHHHH-HHHHhcCCCEEEEEe
Confidence 99987642 1 22455 578899999988643
No 383
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.31 E-value=0.18 Score=44.05 Aligned_cols=94 Identities=17% Similarity=0.312 Sum_probs=60.2
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc--CCCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~f 176 (251)
.++.+||++|+ |.|..+..+++..+ .+|+++ .+++-.+.+++. .. +. +. ...|..+.+.. .+..+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~l-Ga------~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDL-GA------TP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHH-TS------EE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHc-CC------CE-ec-cCCCHHHHHHHHhcCCCc
Confidence 35689999994 34667777787766 489999 888888888764 21 11 22 22334444432 23579
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+-... + +.+.. ..+.|+++|.++.-.
T Consensus 218 D~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG-----G--------PVLDA-SFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC-----T--------HHHHH-HHHHEEEEEEEEESC
T ss_pred eEEEECCC-----c--------HHHHH-HHHHHhcCCeEEEEc
Confidence 99886432 1 23555 467899999988643
No 384
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.26 E-value=0.19 Score=43.81 Aligned_cols=96 Identities=14% Similarity=0.169 Sum_probs=60.2
Q ss_pred CCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025534 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~fD 177 (251)
+.++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.+ . ...+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga~------~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GAD------ETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CCC------EEEcCCcccHHHHHHHHhCCCCce
Confidence 4689999998 55667777777665 4899999999999888763 210 0011001233333332 2 34799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+.... + +.++. +.+.|+++|.++.-.
T Consensus 238 ~vi~~~g-~------------~~~~~-~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 238 KVVDHTG-A------------LYFEG-VIKATANGGRIAIAG 265 (343)
T ss_dssp EEEESSC-S------------SSHHH-HHHHEEEEEEEEESS
T ss_pred EEEECCC-H------------HHHHH-HHHhhccCCEEEEEe
Confidence 9997643 1 11344 467889999887643
No 385
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.20 E-value=0.96 Score=45.42 Aligned_cols=126 Identities=10% Similarity=0.092 Sum_probs=81.1
Q ss_pred CCeEEEEecCchHHHHHHHhcCCC-cEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc----------
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---------- 171 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---------- 171 (251)
+-++++|-||.|++..-+.+. +. ..+.++|+|+..++..+.++ |...++.+|..++...
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN---------PGSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC---------CCCccccccHHHHhhhccchhhhhhh
Confidence 347999999999999887765 44 46889999999999888775 3457788887765310
Q ss_pred -----CCCceeEEEEcCCCCCCCCcccC-----------CccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025534 172 -----RKESYDVIIGDLADPIEGGPCYK-----------LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (251)
Q Consensus 172 -----~~~~fD~Ii~D~~~~~~~~p~~~-----------l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~ 235 (251)
....+|+|+.-+|.+.. ..+.. -+-.+|++. .+.++|.-+++=|+..--.+.....+..++
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~F-S~ag~~~~~~~~d~R~~L~~~~~ri--v~~~rPk~~llENV~glls~~~~~~~~~i~ 686 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGF-SGMNRFNSRTYSKFKNSLVVSFLSY--CDYYRPRFFLLENVRNFVSFKRSMVLKLTL 686 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTC-CSSSCCCHHHHHHHTTSHHHHHHHH--HHHHCCSEEEEEEEGGGGTTGGGHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcch-hhhCCCCCCcccchhhHHHHHHHHH--HHHhCCCEEEEeccHHHhccCcchHHHHHH
Confidence 12368999998874321 11111 111345554 356899877766652110012245677777
Q ss_pred HHHHhh
Q 025534 236 NTLRQV 241 (251)
Q Consensus 236 ~~l~~~ 241 (251)
+.|.+.
T Consensus 687 ~~L~~l 692 (1002)
T 3swr_A 687 RCLVRM 692 (1002)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777764
No 386
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.95 E-value=0.11 Score=45.54 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=60.1
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 177 (251)
.++++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.. ..+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~------~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERL-GAK------RGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CCC------EEEeCCchHHHHHHHHHhCCCce
Confidence 35688999964 34556777777666 4899999999999988874 110 0011111233333322 246799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+.... . +.++. ..+.|+++|.++.-.
T Consensus 238 vvid~~g-----~--------~~~~~-~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIG-----A--------AYFER-NIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCC-----G--------GGHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCC-----H--------HHHHH-HHHHhccCCEEEEEE
Confidence 9986542 1 12445 467899999987643
No 387
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.49 E-value=0.78 Score=41.93 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=63.4
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchh-----------cccCCCCCCCeEEEEcchHHHH
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-----------VNKEAFSDPRLELVINDARAEL 169 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-----------~~~~~~~~~rv~~~~~D~~~~l 169 (251)
.++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++... ...........++ ..|. +-+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-G-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 3679999999733 45555554 3 489999999999887765321 1110001122333 4553 222
Q ss_pred hcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 170 ESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 170 ~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
...|+||...+... -...++++. +...++|+.+++.++.+
T Consensus 113 ----~~aDlVIeaVpe~~-------~~k~~v~~~-l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 113 ----STVDLVVEAVFEDM-------NLKKKVFAE-LSALCKPGAFLCTNTSA 152 (463)
T ss_dssp ----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCSS
T ss_pred ----CCCCEEEEcCCCCH-------HHHHHHHHH-HHhhCCCCeEEEeCCCC
Confidence 46899999875311 113467787 68889999888876543
No 388
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.38 E-value=0.35 Score=42.65 Aligned_cols=96 Identities=11% Similarity=0.200 Sum_probs=59.6
Q ss_pred CCCCeEEEEecC--chHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025534 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 177 (251)
.++.+||++|++ .|.++.++++..+ .+|+++- +++-.+.+++.-. +.-+.....|..+.+++ +++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG-YIPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 456889999984 5677888888766 4787774 8888888877411 00111112344444443 345699
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccC-CCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRL-NPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L-~pgG~l~~~ 218 (251)
+|+-... . .+.++. ..+.| +++|+++.-
T Consensus 234 ~v~d~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT-----N-------VESTTF-CFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC-----S-------HHHHHH-HHHHSCTTCEEEEES
T ss_pred EEEECCC-----c-------hHHHHH-HHHHhhcCCCEEEEE
Confidence 9985432 1 234555 46678 699998764
No 389
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.38 E-value=0.92 Score=39.23 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=59.1
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchh--cccCCCC-CCCeEEEEcchHHHHhcCCCceeE
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV--VNKEAFS-DPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~--~~~~~~~-~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.+|.+||+|.-+ ++..+.+. + .+|++++.+++.++..++... ..+.... ..++.....|..+.+ +.+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-G-QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCCE
Confidence 589999998633 34445443 3 479999999988877665421 1110000 011112345554444 36999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
|++-.+.+. ..+.++. +...|+++.+++.
T Consensus 79 vi~~v~~~~---------~~~~~~~-l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 79 ILIVVPAIH---------HASIAAN-IASYISEGQLIIL 107 (359)
T ss_dssp EEECSCGGG---------HHHHHHH-HGGGCCTTCEEEE
T ss_pred EEEeCCchH---------HHHHHHH-HHHhCCCCCEEEE
Confidence 999865321 2577788 7888998876554
No 390
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.15 E-value=0.78 Score=34.75 Aligned_cols=98 Identities=10% Similarity=0.117 Sum_probs=56.0
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECC-hHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcC-CCce
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID-EEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESY 176 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid-~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~-~~~f 176 (251)
.++|+++|+|.=+ ++..|.+. + .+|+++|.+ ++-.+..++.+ ...++++.+|+.+ .+... -+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g-~~V~vid~~~~~~~~~~~~~~--------~~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-G-QNVTVISNLPEDDIKQLEQRL--------GDNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHH--------CTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-CCEEEEECCChHHHHHHHHhh--------cCCCeEEEcCCCCHHHHHHcChhhC
Confidence 4689999875332 23333333 3 589999998 45444433322 1347888888753 34332 3679
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
|+|++...+.. ....... ..+.+.|...+++...
T Consensus 73 d~vi~~~~~d~---------~n~~~~~-~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 73 RAILALSDNDA---------DNAFVVL-SAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SEEEECSSCHH---------HHHHHHH-HHHHHTSSSCEEEECS
T ss_pred CEEEEecCChH---------HHHHHHH-HHHHHCCCCEEEEEEC
Confidence 99998754321 1122233 3456777777776553
No 391
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.12 E-value=0.37 Score=42.42 Aligned_cols=97 Identities=15% Similarity=0.260 Sum_probs=57.2
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.++.+||+.|+ |-|..+.++++..+ .+|++++ +++-.+.+++. .. +.-+.....|..+-+... ..+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~~-~g~D~ 251 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKSL-KPFDF 251 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHTS-CCBSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhhc-CCCCE
Confidence 34689999994 44556777777766 5898888 66667777653 11 000110112333444332 57999
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+-.... + ...++. ..+.|+++|.++.-.
T Consensus 252 vid~~g~-----~------~~~~~~-~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVGG-----S------TETWAP-DFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSCT-----T------HHHHGG-GGBCSSSCCEEEESC
T ss_pred EEECCCC-----h------hhhhHH-HHHhhcCCcEEEEeC
Confidence 9865421 1 012344 468899999998643
No 392
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.11 E-value=0.17 Score=44.44 Aligned_cols=96 Identities=17% Similarity=0.111 Sum_probs=58.6
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
.+.++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+ . ...+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 34689999997 34455666666655 589999999998888876411 00011111233333322 2 3479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+|+.... . +.+.. ..+.|+++|.++.-
T Consensus 241 D~vi~~~G-----~--------~~~~~-~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 241 DIIIEMLA-----N--------VNLSK-DLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEEESCH-----H--------HHHHH-HHHHEEEEEEEEEC
T ss_pred EEEEECCC-----h--------HHHHH-HHHhccCCCEEEEE
Confidence 99986632 1 23455 46789999998764
No 393
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.09 E-value=0.54 Score=42.42 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=33.8
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhc
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (251)
.++++||+.|+ |-|..+..+++..+ .++++++.+++-.+.+++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 35688999996 33556777777765 5888999999999988764
No 394
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.08 E-value=1.3 Score=37.00 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=54.6
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCC-ceeEEE
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKE-SYDVII 180 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~-~fD~Ii 180 (251)
++|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. +. . + . ...|..+.+ + ..|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~-----~-~--~-~~~~~~~~~----~~~aDvVi 67 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI-----I-D--E-GTTSIAKVE----DFSPDFVM 67 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS-----C-S--E-EESCGGGGG----GTCCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CC-----c-c--c-ccCCHHHHh----cCCCCEEE
Confidence 479999988533 344454432113799999999988877643 10 0 0 1 123433322 3 689999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+..+.. ...+.++. +...++++.+++.
T Consensus 68 lavp~~---------~~~~v~~~-l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSPVR---------TFREIAKK-LSYILSEDATVTD 94 (281)
T ss_dssp ECSCHH---------HHHHHHHH-HHHHSCTTCEEEE
T ss_pred EcCCHH---------HHHHHHHH-HHhhCCCCcEEEE
Confidence 986421 13466777 6778888876654
No 395
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.06 E-value=1.3 Score=40.67 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=65.4
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhch-hcccCCCC--------CCCeEEEEcchHHHHh
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAFS--------DPRLELVINDARAELE 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~~--------~~rv~~~~~D~~~~l~ 170 (251)
...+|.+||+|.=+ ++..+++. + .+|+++|+|++.++..++.- +....... ..++++ ..|..+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G-~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~- 82 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-G-HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV- 82 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH-
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-C-CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh-
Confidence 34789999999543 45555554 3 48999999999999887642 11000000 123333 34444333
Q ss_pred cCCCceeEEEEcCCCCCC-CCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 171 SRKESYDVIIGDLADPIE-GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 171 ~~~~~fD~Ii~D~~~~~~-~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+..|+||+..+.|.. .+.+.--+..+.++. +.+.|+++-+++..++
T Consensus 83 ---~~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 83 ---AHGDVQFIAVGTPPDEDGSADLQYVLAAARN-IGRYMTGFKVIVDKST 129 (478)
T ss_dssp ---HHCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECSC
T ss_pred ---hcCCEEEEEeCCCcccCCCccHHHHHHHHHH-HHHhcCCCCEEEEeCC
Confidence 358999998775531 111122234567777 6788998777655443
No 396
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.96 E-value=0.69 Score=40.30 Aligned_cols=106 Identities=9% Similarity=0.120 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc------cCCCCC--------CCeEEEEcc
Q 025534 101 PNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KEAFSD--------PRLELVIND 164 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~------~~~~~~--------~rv~~~~~D 164 (251)
+...+|.+||+|+=+ ++..++.. + -.|+.+|++++.++.++++.... ...+.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~-G-~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-G-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 456899999998654 34444443 4 58999999999988877654211 000100 12222 234
Q ss_pred hHHHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 165 ARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 165 ~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
..+.+ ...|+|+=..+... -.-++.|++ +.++++|+.+|+.|+.+
T Consensus 81 l~~a~----~~ad~ViEav~E~l-------~iK~~lf~~-l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 81 LAEAV----EGVVHIQECVPENL-------DLKRKIFAQ-LDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHHHT----TTEEEEEECCCSCH-------HHHHHHHHH-HHTTCCSSSEEEECCSS
T ss_pred hHhHh----ccCcEEeeccccHH-------HHHHHHHHH-HHHHhhhcceeehhhhh
Confidence 33333 45899997765321 124688999 79999999999988753
No 397
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.91 E-value=0.18 Score=44.18 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~-~~~f 176 (251)
..+++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.+ . ...+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~~------~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GAA------AGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCc------EEEecCChHHHHHHHHHhcCCCc
Confidence 34688999985 34455666666655 5899999999988888653 210 0000001233333322 2 2479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
|+|+.... .+ .++. ..+.|+++|.++.-.
T Consensus 233 d~vi~~~G-----~~--------~~~~-~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIG-----GS--------YWEK-NVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSC-----GG--------GHHH-HHHHEEEEEEEEECC
T ss_pred eEEEECCC-----ch--------HHHH-HHHhccCCCEEEEEe
Confidence 99987642 11 1344 467889999988654
No 398
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.86 E-value=0.38 Score=41.89 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=64.5
Q ss_pred CCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc-----cCCCCC---------CCeEEEEcchH
Q 025534 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-----KEAFSD---------PRLELVINDAR 166 (251)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-----~~~~~~---------~rv~~~~~D~~ 166 (251)
.++|-+||+|. ++++..+++. + .+|+++|.+++.++.+++....+ ...+.+ .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-G-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 46899999985 3455666664 3 48999999999998876542110 000001 13443 34544
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 167 ~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+.+ ...|+|+...+... -...++|+. +...++|+.+++.++.
T Consensus 83 eav----~~aDlVieavpe~~-------~~k~~v~~~-l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV----EGVVHIQECVPENL-------DLKRKIFAQ-LDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT----TTEEEEEECCCSCH-------HHHHHHHHH-HHTTCCSSSEEEECCS
T ss_pred HHH----hcCCEEEEeccCCH-------HHHHHHHHH-HHhhCCCCeEEEEeCC
Confidence 433 46899999876321 123577888 7889999888876653
No 399
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.72 E-value=0.28 Score=41.08 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=24.5
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECCh
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDE 136 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~ 136 (251)
..++||++|+|+=+ ++..|++. ++.+++.+|.|.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 35799999997432 34455554 667999999996
No 400
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.62 E-value=0.32 Score=40.21 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=45.8
Q ss_pred HHHHHhHhhcCCCCCeEEEEecCchHHH--HHHHhcCCCcEEEEEEC--ChHHHHHHHhchhcccCCCCCCCeEEEEcch
Q 025534 90 ESLVHPALLHHPNPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDI--DEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (251)
Q Consensus 90 e~l~~~~~~~~~~~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEi--d~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~ 165 (251)
|.+...|+......++||++|+|.=+.. ..|++. + ++|++|+. ++++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~-G-A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE-G-AAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG-C-CCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC-C-CEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 4455568777778999999999865543 344443 3 58888864 3444444432 3456654442
Q ss_pred HHHHhcCCCceeEEEEcCC
Q 025534 166 RAELESRKESYDVIIGDLA 184 (251)
Q Consensus 166 ~~~l~~~~~~fD~Ii~D~~ 184 (251)
.. ..-..+|+||....
T Consensus 85 ~~---~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 85 GE---EDLLNVFFIVVATN 100 (223)
T ss_dssp CG---GGSSSCSEEEECCC
T ss_pred CH---hHhCCCCEEEECCC
Confidence 21 11246899987654
No 401
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.55 E-value=1.2 Score=43.23 Aligned_cols=56 Identities=14% Similarity=0.052 Sum_probs=40.5
Q ss_pred CeEEEEecCchHHHHHHHhcC-----CCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH
Q 025534 104 KTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (251)
Q Consensus 104 ~~VL~iG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~ 168 (251)
.+|+||-||.|+++.-+.+.. ...-+.++|+|+.+++.-+.+++ ...++++|..++
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---------~~~~~~~di~~i 273 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---------QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---------TSEEEESCHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---------CCceecCcHHHh
Confidence 469999999999987765531 12457899999999999888753 345555655443
No 402
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.48 E-value=0.31 Score=42.42 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=39.6
Q ss_pred CCCCCeEEEEecCchHHHHHHHhcCCCcEEEEEECCh---HHHHHHHhchh
Q 025534 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLV 147 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~ 147 (251)
..++..|||.-||+|+++..+.+.. .+.+++|+++ ..++.+++++.
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHH
Confidence 3566789999999999999988873 6899999999 99999998865
No 403
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.40 E-value=3.8 Score=34.47 Aligned_cols=76 Identities=20% Similarity=0.364 Sum_probs=47.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChH-HHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEE-VVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~-vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~ 171 (251)
++++||+.|+++|. +++.+++. + .+|.+++.+++ ..+...+.... ...++.++..|..+. ++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE-G-ANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHH
Confidence 46789999987664 44555554 3 58999998865 33333333322 135788888887542 211
Q ss_pred ---CCCceeEEEEcCC
Q 025534 172 ---RKESYDVIIGDLA 184 (251)
Q Consensus 172 ---~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++.
T Consensus 119 ~~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1247899999864
No 404
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.30 E-value=1.7 Score=31.63 Aligned_cols=70 Identities=21% Similarity=0.286 Sum_probs=42.2
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchH--HHHhcC-CCcee
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR-KESYD 177 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~-~~~fD 177 (251)
..+|+++|+|.=+ ++..+.+. + .+|+++|.+++.++..++.+ .+.++.+|.. +.+... -+.+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 3589999886433 23344443 3 58999999998776655321 2345555543 223222 35799
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
+|++..+
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9998864
No 405
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.25 E-value=1.9 Score=39.28 Aligned_cols=110 Identities=16% Similarity=0.222 Sum_probs=65.1
Q ss_pred CCeEEEEecCchHH--HHHHHhcCCCcEEEEEECChHHHHHHHhchh-cccCCC--------CCCCeEEEEcchHHHHhc
Q 025534 103 PKTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAF--------SDPRLELVINDARAELES 171 (251)
Q Consensus 103 ~~~VL~iG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~--------~~~rv~~~~~D~~~~l~~ 171 (251)
.-|+-+||+|.=++ +..+++. + -+|+++|+|++.++..++... .....+ ...++++ ..|..+-+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G-~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~-- 82 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-G-HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV-- 82 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH--
Confidence 46899999986554 4455554 3 489999999999988776311 000000 0123433 35655544
Q ss_pred CCCceeEEEEcCCCCCC--CCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 172 RKESYDVIIGDLADPIE--GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~--~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+..|+||+..+.|.. .+.+.--+-.+.++. +.+.|++|-+++..+.
T Consensus 83 --~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~-i~~~l~~g~iVV~~ST 130 (446)
T 4a7p_A 83 --KDADAVFIAVGTPSRRGDGHADLSYVFAAARE-IAENLTKPSVIVTKST 130 (446)
T ss_dssp --TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHH-HHHSCCSCCEEEECSC
T ss_pred --hcCCEEEEEcCCCCccccCCccHHHHHHHHHH-HHHhcCCCCEEEEeCC
Confidence 357999998765531 111111123566677 6788998887776553
No 406
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.06 E-value=0.52 Score=39.70 Aligned_cols=77 Identities=12% Similarity=0.171 Sum_probs=50.9
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH---H----h-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---L----E- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~---l----~- 170 (251)
+++.||+.|+++|. +++.+++. + .+|.+++.++.-.+.+.+.+... ...++.++..|..+. + .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN-G-IMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHH
Confidence 46789999987663 45555554 4 58999999988766655544322 235788888887543 1 1
Q ss_pred --cCCCceeEEEEcCC
Q 025534 171 --SRKESYDVIIGDLA 184 (251)
Q Consensus 171 --~~~~~fD~Ii~D~~ 184 (251)
...++.|++|.++-
T Consensus 85 ~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 85 IKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 11257999999875
No 407
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.02 E-value=0.48 Score=40.74 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=54.0
Q ss_pred eEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch-HHHHhc-CCCceeEEE
Q 025534 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES-RKESYDVII 180 (251)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~-~~~l~~-~~~~fD~Ii 180 (251)
+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. ... .-+-..|. .+.++. ..+.+|+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~--------~~i~~~~~~~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GAK--------EVLAREDVMAERIRPLDKQRWAAAV 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TCS--------EEEECC---------CCSCCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CCc--------EEEecCCcHHHHHHHhcCCcccEEE
Confidence 7999997 44556777777766 4799999998888888763 210 00111111 112222 235799988
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
-... .+ .++. ..+.|+++|+++.-.
T Consensus 222 d~~g-----~~--------~~~~-~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 222 DPVG-----GR--------TLAT-VLSRMRYGGAVAVSG 246 (328)
T ss_dssp ECST-----TT--------THHH-HHHTEEEEEEEEECS
T ss_pred ECCc-----HH--------HHHH-HHHhhccCCEEEEEe
Confidence 5532 11 1344 467899999988643
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.00 E-value=1 Score=40.01 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=30.7
Q ss_pred CCCeEEEEecCchHH-HHHHHhcCCCcEEEEEECChHHHHHHHh
Q 025534 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKS 144 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~ 144 (251)
.+++|+++|+|.=+. +..+++..+ .+|+++|.++.-.+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH
Confidence 578999999975443 344455455 479999999987777766
No 409
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.94 E-value=0.28 Score=42.13 Aligned_cols=90 Identities=23% Similarity=0.283 Sum_probs=57.4
Q ss_pred eEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCceeEEEE
Q 025534 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVIIG 181 (251)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~Ii~ 181 (251)
+||++|+ |.|.++.++++..+. +|++++.+++-.+.+++. +.. .++..+-...++. ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GAN---------RILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TCS---------EEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CCC---------EEEecCCHHHHHhhcCCCccEEEE
Confidence 5999996 456678888887664 899999999999998874 210 1111110111222 2357998774
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.. + .+.++. ..+.|+++|+++.-.
T Consensus 218 ~~------g-------~~~~~~-~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 218 TV------G-------DKVLAK-VLAQMNYGGCVAACG 241 (324)
T ss_dssp SS------C-------HHHHHH-HHHTEEEEEEEEECC
T ss_pred CC------C-------cHHHHH-HHHHHhcCCEEEEEe
Confidence 32 1 135666 578999999988643
No 410
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.92 E-value=1.3 Score=31.34 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=41.9
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcCCCceeE
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRKESYDV 178 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~~~~fD~ 178 (251)
.++|+++|+|.-+ ++..+++. +..+|++++.+++-.+..++ ..++++..|..+ .+...-+.+|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 4689999984222 23344443 43689999999987766552 234555555432 22222247999
Q ss_pred EEEcC
Q 025534 179 IIGDL 183 (251)
Q Consensus 179 Ii~D~ 183 (251)
|+...
T Consensus 73 vi~~~ 77 (118)
T 3ic5_A 73 VISAA 77 (118)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99876
No 411
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.91 E-value=1.1 Score=37.09 Aligned_cols=75 Identities=19% Similarity=0.193 Sum_probs=51.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------H---
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------L--- 169 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l--- 169 (251)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-++.+.+.+... ..++.++..|..+. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE-G-FTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHH
Confidence 56789999988764 45555554 4 58999999988776665544322 35788888886432 1
Q ss_pred hcCCCceeEEEEcCC
Q 025534 170 ESRKESYDVIIGDLA 184 (251)
Q Consensus 170 ~~~~~~fD~Ii~D~~ 184 (251)
.+. ++.|++|.++-
T Consensus 79 ~~~-g~id~lv~nAg 92 (252)
T 3h7a_A 79 DAH-APLEVTIFNVG 92 (252)
T ss_dssp HHH-SCEEEEEECCC
T ss_pred Hhh-CCceEEEECCC
Confidence 123 57999999875
No 412
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.90 E-value=2.7 Score=38.52 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=62.3
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhch-hcccCCC-------CCCCeEEEEcchHHHHhcCC
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF-------SDPRLELVINDARAELESRK 173 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~-------~~~rv~~~~~D~~~~l~~~~ 173 (251)
.+|.+||+|.=+ ++..+++.....+|+++|++++.++..++.. +.....+ ...++++ ..|..+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~---- 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAI---- 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHh----
Confidence 589999998654 4555666521258999999999988876521 1100000 0012332 34443433
Q ss_pred CceeEEEEcCCCCCCC-C----cccCC-ccHHHHHHHHcccCCCCcEEEEec
Q 025534 174 ESYDVIIGDLADPIEG-G----PCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~-~----p~~~l-~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...|+|++..+.|... + ....+ +..+..+. +.+.|++|.+++..+
T Consensus 85 ~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 85 AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRT-IAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred hcCCEEEEecCCccccccccccCCCcHHHHHHHHHH-HHHhCCCCCEEEECC
Confidence 2579999987654310 0 00011 23566777 678899877666443
No 413
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=90.84 E-value=2.2 Score=34.62 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=49.4
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch--------HHHHh
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--------RAELE 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~--------~~~l~ 170 (251)
+++.||+.|+++|. +++.+++. + .+|..++.+++-++...+.+... ..+++.++..|. .++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH-G-ASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHH
Confidence 46789999987653 44555554 3 58999999998877666555422 124566766665 12222
Q ss_pred c---CCCceeEEEEcCC
Q 025534 171 S---RKESYDVIIGDLA 184 (251)
Q Consensus 171 ~---~~~~fD~Ii~D~~ 184 (251)
. .-++.|++|.++.
T Consensus 87 ~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 1 1247999999875
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.73 E-value=2.4 Score=34.97 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=49.1
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
++++||+.|+++|. +++.+++. + .+|..++.+++-++...+.+. .++.++..|..+. ++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG-G-AEVLLTGRNESNIARIREEFG--------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHhC--------CcceEEEccCCCHHHHHHHHHHH
Confidence 56889999987664 45555554 4 589999999887776554431 3677777776432 11
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|+++.++-
T Consensus 77 ~~~~g~id~lv~nAg 91 (255)
T 4eso_A 77 GQTLGAIDLLHINAG 91 (255)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 11257999999874
No 415
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=90.72 E-value=3.3 Score=42.86 Aligned_cols=126 Identities=10% Similarity=0.101 Sum_probs=80.4
Q ss_pred CCeEEEEecCchHHHHHHHhcCCC-cEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc----------
Q 025534 103 PKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---------- 171 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---------- 171 (251)
.-++++|-||.|++..-+.+. +. ..+.++|+|+.+++..+.+++ ...++.+|..+++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~ 920 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSL 920 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSS
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhh
Confidence 457999999999999887764 43 468899999999998887753 456778888766421
Q ss_pred -----CCCceeEEEEcCCCCCCCCcccCC-----------ccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025534 172 -----RKESYDVIIGDLADPIEGGPCYKL-----------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (251)
Q Consensus 172 -----~~~~fD~Ii~D~~~~~~~~p~~~l-----------~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~ 235 (251)
.....|+|+--+|.+.... +... +-.+|++. -+.++|.-+++=|+..--.+.....+..++
T Consensus 921 ~~~lp~~~~vDvl~GGpPCQ~FS~-agr~~~~~~~d~R~~L~~~~lri--v~~~rPk~fv~ENV~glls~~~g~~~~~il 997 (1330)
T 3av4_A 921 GQRLPQKGDVEMLCGGPPCQGFSG-MNRFNSRTYSKFKNSLVVSFLSY--CDYYRPRFFLLENVRNFVSYRRSMVLKLTL 997 (1330)
T ss_dssp CCBCCCTTTCSEEEECCCCTTTCS-SSCCCHHHHHHHHHSHHHHHHHH--HHHHCCSEEEEEEEGGGGTTTTTHHHHHHH
T ss_pred hhhccccCccceEEecCCCccccc-ccccccccccchhhHHHHHHHHH--HHHhcCcEEEEeccHHHhccCccHHHHHHH
Confidence 0136899999887432111 1110 11345554 356899866665552110012334677777
Q ss_pred HHHHhh
Q 025534 236 NTLRQV 241 (251)
Q Consensus 236 ~~l~~~ 241 (251)
+.|.+.
T Consensus 998 ~~L~~l 1003 (1330)
T 3av4_A 998 RCLVRM 1003 (1330)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777765
No 416
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=90.66 E-value=0.041 Score=60.33 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=0.0
Q ss_pred eEEEEecCchHHHHHHHhcCC-----CcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 105 TIFIMGGGEGSTAREILRHKT-----VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 105 ~VL~iG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
|||+||.|+|..+..+++.-. ..+.|..|+++...+.+++.|... .++.-.-|..+.-......||+|
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCCCC-----CCEE
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------ccccccccccccccCCCCceeEE
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
|....-+...... +.+.. +++.|+|||.+++
T Consensus 1316 ia~~vl~~t~~~~------~~l~~-~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1316 VCNCALATLGDPA------VAVGN-MAATLKEGGFLLL 1346 (2512)
T ss_dssp EEECC---------------------------CCEEEE
T ss_pred EEcccccccccHH------HHHHH-HHHhcCCCcEEEE
No 417
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.61 E-value=0.71 Score=38.59 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=24.6
Q ss_pred CCCeEEEEecCc-hH-HHHHHHhcCCCcEEEEEECCh
Q 025534 102 NPKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDE 136 (251)
Q Consensus 102 ~~~~VL~iG~G~-G~-~~~~l~~~~~~~~v~~VEid~ 136 (251)
...+||++|+|+ |. ++..|++ .++.+++.+|-|.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~-~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAG-AGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHH-TTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHH-cCCCeEEEEeCCC
Confidence 457999999984 43 3445555 4778999998873
No 418
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.52 E-value=1.6 Score=35.10 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=55.8
Q ss_pred eEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH--HhcC-CCceeEE
Q 025534 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESR-KESYDVI 179 (251)
Q Consensus 105 ~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~--l~~~-~~~fD~I 179 (251)
+|+++|+|.=+ ++..|.+. + .+|+++|.|++.++...+. ..+.++.+|+.+. +... -+..|+|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g-~~v~vid~~~~~~~~l~~~----------~~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-K-YGVVIINKDRELCEEFAKK----------LKATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHH----------SSSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHH----------cCCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 68999974322 23333333 3 4899999999988765432 1356788887642 3332 3679999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
++...+.. ....... ..+.+.+...+++...
T Consensus 70 i~~~~~d~---------~n~~~~~-~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 70 VILTPRDE---------VNLFIAQ-LVMKDFGVKRVVSLVN 100 (218)
T ss_dssp EECCSCHH---------HHHHHHH-HHHHTSCCCEEEECCC
T ss_pred EEecCCcH---------HHHHHHH-HHHHHcCCCeEEEEEe
Confidence 98754321 1123333 3455667776766543
No 419
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.45 E-value=0.46 Score=41.41 Aligned_cols=95 Identities=16% Similarity=0.144 Sum_probs=54.4
Q ss_pred CCCCeEEEEecC--chHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025534 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 177 (251)
.++.+||+.|++ .|.++..+++..+..+|.+++ +++-.+.++ +... .-+. ...|..+.+.+ .++.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~------~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVT------HLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSS------EEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCc------EEEc-CCccHHHHHHHhcCCCce
Confidence 356899999983 355667777765456888887 555555555 2211 1111 12344444432 346899
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|+-... ++ .++. ..+.|+++|++++-.
T Consensus 211 vv~d~~g-----~~--------~~~~-~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLC-----GD--------NTGK-GLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC---------------------CTTEEEEEEEEEEC
T ss_pred EEEECCC-----ch--------hHHH-HHHHhhcCCEEEEEC
Confidence 9986542 11 1234 478999999998654
No 420
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.43 E-value=3.2 Score=34.04 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcch--H------HHHh
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--R------AELE 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~--~------~~l~ 170 (251)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+.... ..++.++..|. . +.+.
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARY-G-ATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHH
Confidence 46789999987663 45555554 3 589999999887776655443221 23667777776 1 1221
Q ss_pred ---cCCCceeEEEEcCC
Q 025534 171 ---SRKESYDVIIGDLA 184 (251)
Q Consensus 171 ---~~~~~fD~Ii~D~~ 184 (251)
..-++.|++|.++-
T Consensus 85 ~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHCSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 12357999999875
No 421
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.42 E-value=2.9 Score=38.02 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=62.6
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchh-cccCCCC--------CCCeEEEEcchHHHHhcC
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFS--------DPRLELVINDARAELESR 172 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~~--------~~rv~~~~~D~~~~l~~~ 172 (251)
.+|.+||+|.=+ ++..+++. + .+|+++|+|++.++..++... .....+. ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 479999998544 34455554 3 489999999999887766311 0000000 123443 34555444
Q ss_pred CCceeEEEEcCCCCCC-CCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 173 KESYDVIIGDLADPIE-GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 173 ~~~fD~Ii~D~~~~~~-~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+..|+||+..+.+.. .+...--+..+.++. +.+.|++|-+++..+
T Consensus 77 -~~aDvViiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -PEADIIFIAVGTPAGEDGSADMSYVLDAARS-IGRAMSRYILIVTKS 122 (450)
T ss_dssp -GGCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred -hcCCEEEEEcCCCcccCCCcChHHHHHHHHH-HHhhCCCCCEEEEee
Confidence 357999998765431 111111123566777 678888877666544
No 422
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.36 E-value=0.86 Score=40.87 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=31.2
Q ss_pred CCCeEEEEecCchHH-HHHHHhcCCCcEEEEEECChHHHHHHHhc
Q 025534 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (251)
.+.+|+++|+|.=+. +..+++..+ .+|+++|.++...+.+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~l 214 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQSM 214 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc
Confidence 478999999975443 344455455 4899999999888877553
No 423
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.26 E-value=7 Score=33.34 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=64.3
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECC--hHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID--EEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid--~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
...+|.+||+|.=+ ++..+++. +..+|+++|.+ ++..+.+++. .++ ...|..+.+. ..|
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~----~aD 85 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAG----ECD 85 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHH----HCS
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHh----cCC
Confidence 34689999998543 45556655 32489999997 5766665542 122 2234455443 479
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhh
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~ 241 (251)
+||+..+.+. ..+.++. +...|+++.+++ +..+ ..+.....+.+.+.+.
T Consensus 86 vVi~~vp~~~---------~~~~~~~-l~~~l~~~~ivv-d~st----~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 86 VIFSLVTAQA---------ALEVAQQ-AGPHLCEGALYA-DFTS----CSPAVKRAIGDVISRH 134 (312)
T ss_dssp EEEECSCTTT---------HHHHHHH-HGGGCCTTCEEE-ECCC----CCHHHHHHHHHHHHHH
T ss_pred EEEEecCchh---------HHHHHHh-hHhhcCCCCEEE-EcCC----CCHHHHHHHHHHHHhh
Confidence 9999876432 1345677 688898877665 4322 1234445555556554
No 424
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.26 E-value=1.2 Score=36.18 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=56.9
Q ss_pred CCCeEEEEecCchHHHHHHHhc--CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcC-CCce
Q 025534 102 NPKTIFIMGGGEGSTAREILRH--KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESY 176 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~-~~~f 176 (251)
..++|+++|+| .++..+++. .... |+++|.|++.++.++ . .++++.+|+.+ .+... -+..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~-----------~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-S-----------GANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T-----------TCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c-----------CCeEEEcCCCCHHHHHhcCcchh
Confidence 34689999985 444444442 1124 999999998876554 1 36788888763 44333 3679
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
|.|++...+.. ....... ..+.+.|+..+++....
T Consensus 73 d~vi~~~~~d~---------~n~~~~~-~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 73 RAVIVDLESDS---------ETIHCIL-GIRKIDESVRIIAEAER 107 (234)
T ss_dssp SEEEECCSCHH---------HHHHHHH-HHHHHCSSSEEEEECSS
T ss_pred cEEEEcCCCcH---------HHHHHHH-HHHHHCCCCeEEEEECC
Confidence 99998754311 1112222 34567887777776543
No 425
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.07 E-value=0.88 Score=39.02 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=54.8
Q ss_pred CCCCeEEEEe--cCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH-HHhcCCCcee
Q 025534 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYD 177 (251)
Q Consensus 101 ~~~~~VL~iG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~-~l~~~~~~fD 177 (251)
.++.+||++| +|.|.++..+++..+ .+|+++.. ++-.+.+++. ... .++..+-.+ +... -+.+|
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~-~~~~~~~~~l-Ga~---------~~i~~~~~~~~~~~-~~g~D 217 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTAS-KRNHAFLKAL-GAE---------QCINYHEEDFLLAI-STPVD 217 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEEC-HHHHHHHHHH-TCS---------EEEETTTSCHHHHC-CSCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEec-cchHHHHHHc-CCC---------EEEeCCCcchhhhh-ccCCC
Confidence 4568999997 344667778888766 48888875 4447777763 210 122111111 2222 25799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
+|+-... + +.+.. ..+.|+++|+++.-
T Consensus 218 ~v~d~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLVG-----G--------DVGIQ-SIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESSC-----H--------HHHHH-HGGGEEEEEEEEEC
T ss_pred EEEECCC-----c--------HHHHH-HHHhccCCCEEEEe
Confidence 9885431 1 22355 57899999998864
No 426
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.98 E-value=0.38 Score=41.43 Aligned_cols=34 Identities=29% Similarity=0.395 Sum_probs=25.4
Q ss_pred CCCeEEEEecCch-H-HHHHHHhcCCCcEEEEEECCh
Q 025534 102 NPKTIFIMGGGEG-S-TAREILRHKTVEKVVMCDIDE 136 (251)
Q Consensus 102 ~~~~VL~iG~G~G-~-~~~~l~~~~~~~~v~~VEid~ 136 (251)
...+||++|+|+- + ++..|++. ++.+++.+|-|.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 3579999999853 3 34555554 688999999886
No 427
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.68 E-value=2.2 Score=36.14 Aligned_cols=102 Identities=17% Similarity=0.267 Sum_probs=61.8
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhc-----c-cCCCCC------------CCeEEEE
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-----N-KEAFSD------------PRLELVI 162 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-----~-~~~~~~------------~rv~~~~ 162 (251)
-++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++.+.. . .+.... .++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G-~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~- 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-G-HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS- 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-
Confidence 3689999998643 45556654 3 4899999999988876543211 0 000000 134332
Q ss_pred cchHHHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 163 NDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 163 ~D~~~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
.|..+.+ ...|+||...+... -...++++. +.+.++|+.+++.++
T Consensus 92 ~~~~~~~----~~aD~Vi~avp~~~-------~~~~~v~~~-l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV----HSTDLVVEAIVENL-------KVKNELFKR-LDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT----TSCSEEEECCCSCH-------HHHHHHHHH-HTTTSCTTCEEEECC
T ss_pred cCHHHhh----cCCCEEEEcCcCcH-------HHHHHHHHH-HHhhCCCCeEEEECC
Confidence 4433333 46899999875321 012467787 788888888776554
No 428
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.43 E-value=2.7 Score=31.29 Aligned_cols=66 Identities=26% Similarity=0.310 Sum_probs=40.8
Q ss_pred CCeEEEEecCchHHHHHHHhc---CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEE-EEcchHHHHhcCCCceeE
Q 025534 103 PKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELESRKESYDV 178 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~-~~~D~~~~l~~~~~~fD~ 178 (251)
+++|++||+| .++..+++. .+. +|++++.+++-.+...+.+. .++ ...|..+.+. .+|+
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~----~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK----NNDV 83 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH----TCSE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc----CCCE
Confidence 7899999985 444444432 343 59999999987664333222 122 3345555543 5899
Q ss_pred EEEcCCC
Q 025534 179 IIGDLAD 185 (251)
Q Consensus 179 Ii~D~~~ 185 (251)
|+...+.
T Consensus 84 vi~at~~ 90 (144)
T 3oj0_A 84 IITATSS 90 (144)
T ss_dssp EEECSCC
T ss_pred EEEeCCC
Confidence 9987654
No 429
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.42 E-value=1.8 Score=37.10 Aligned_cols=78 Identities=22% Similarity=0.364 Sum_probs=52.0
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
.++.||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+...+ ..+++.++..|..+. +.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~-G-~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ-G-CKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987664 45555554 3 589999999987776665544221 124788888886432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
..-++.|++|.++-
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 12357899999875
No 430
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.40 E-value=2.3 Score=34.58 Aligned_cols=76 Identities=12% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
+.++||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~-G-~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK-G-ATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-T-CEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 45789999987663 45566654 3 58999999998777665544322 35788888886432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+..++.|++|.++.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 22357899999875
No 431
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.29 E-value=5.3 Score=34.70 Aligned_cols=107 Identities=13% Similarity=0.142 Sum_probs=57.9
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHH----HHhchhcccCCCCCCCeEEEEcchHHHHhcCCCc
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEF----CKSYLVVNKEAFSDPRLELVINDARAELESRKES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~----a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 175 (251)
.+.+|.+||+|.=+ ++..++...-..+++.+|++++.++- .+.-++.. ..++++..+|... + ..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~a-~----~~ 73 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYED-C----KD 73 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGGG-G----TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHHH-h----CC
Confidence 46789999986422 33344444323589999999986654 12222321 1346666666322 1 46
Q ss_pred eeEEEEcCCCCCCCCc-ccCCc--c----HHHHHHHHcccCCCCcEEEEecC
Q 025534 176 YDVIIGDLADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 176 fD~Ii~D~~~~~~~~p-~~~l~--~----~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
.|+|++-...|...+. ...|+ + .+..+. +.+ ..|++++++-++
T Consensus 74 aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~-I~~-~~p~a~vlvvtN 123 (326)
T 3pqe_A 74 ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSE-VMA-SGFDGIFLVATN 123 (326)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHH-HHH-TTCCSEEEECSS
T ss_pred CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHH-HHH-hcCCeEEEEcCC
Confidence 8999987654431111 01111 1 233333 233 579998876544
No 432
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.28 E-value=3.4 Score=37.66 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=50.7
Q ss_pred CCCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcCC-Cce
Q 025534 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRK-ESY 176 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~~-~~f 176 (251)
...++|+++|+|.-+ ..+++. ....+|..+|.|++-.+.+.+.+ ++..+++||+.+ .|.+.+ +..
T Consensus 233 ~~~~~v~I~GgG~ig--~~lA~~L~~~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIG--ASLAKRLEQTYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHH--HHHHHHHTTTSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHH--HHHHHHhhhcCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 345899999987544 222221 12258999999999888766543 467899999976 455444 789
Q ss_pred eEEEEcCC
Q 025534 177 DVIIGDLA 184 (251)
Q Consensus 177 D~Ii~D~~ 184 (251)
|+++.-..
T Consensus 302 D~~ia~T~ 309 (461)
T 4g65_A 302 DVFIALTN 309 (461)
T ss_dssp SEEEECCS
T ss_pred cEEEEccc
Confidence 99998643
No 433
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.14 E-value=1.2 Score=38.16 Aligned_cols=96 Identities=15% Similarity=0.278 Sum_probs=60.5
Q ss_pred CCCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
.-++|-+||+|. +.++..++ . + -+|+++|.+++.++.+++.+. .. .-.++++. .|..+ + ...|+|
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G-~~V~v~d~~~~~~~~~~~~l~--~~--~~~~i~~~-~~~~~-~----~~aDlV 77 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-K-HEVVLQDVSEKALEAAREQIP--EE--LLSKIEFT-TTLEK-V----KDCDIV 77 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-T-SEEEEECSCHHHHHHHHHHSC--GG--GGGGEEEE-SSCTT-G----GGCSEE
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-C-CEEEEEECCHHHHHHHHHHHH--HH--HhCCeEEe-CCHHH-H----cCCCEE
Confidence 357899999995 34566666 4 4 489999999999998877621 00 00134432 33322 2 458999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
|...++.. -....+|.. +... |+.+++.|+.
T Consensus 78 ieavpe~~-------~vk~~l~~~-l~~~--~~~IlasntS 108 (293)
T 1zej_A 78 MEAVFEDL-------NTKVEVLRE-VERL--TNAPLCSNTS 108 (293)
T ss_dssp EECCCSCH-------HHHHHHHHH-HHTT--CCSCEEECCS
T ss_pred EEcCcCCH-------HHHHHHHHH-HhcC--CCCEEEEECC
Confidence 99877432 112456676 5554 8888877764
No 434
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.13 E-value=1.6 Score=36.76 Aligned_cols=103 Identities=16% Similarity=0.216 Sum_probs=62.9
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc------cC-CCCC-------CCeEEEEcchH
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KE-AFSD-------PRLELVINDAR 166 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~------~~-~~~~-------~rv~~~~~D~~ 166 (251)
.++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++.+... .. .... .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 3689999998533 44555554 4 48999999999988877653110 00 0000 12232 34444
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 167 ~~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+.+ ...|+||...+... -...++++. +...++|+.+++.++.
T Consensus 81 ~~~----~~aDlVi~av~~~~-------~~~~~v~~~-l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 81 QAV----KDADLVIEAVPESL-------DLKRDIYTK-LGELAPAKTIFATNSS 122 (283)
T ss_dssp HHT----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred HHh----ccCCEEEEeccCcH-------HHHHHHHHH-HHhhCCCCcEEEECCC
Confidence 333 46899999876321 123567788 6888999888876653
No 435
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.13 E-value=1.6 Score=35.98 Aligned_cols=77 Identities=23% Similarity=0.345 Sum_probs=52.1
Q ss_pred CCCeEEEEec-CchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc
Q 025534 102 NPKTIFIMGG-GEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (251)
Q Consensus 102 ~~~~VL~iG~-G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~ 171 (251)
++++||+.|+ |.|. +++.+++. + .+|++++.+++-.+...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G-ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C-CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 5678999998 5443 45666665 3 58999999998777666554322 235789999887542 211
Q ss_pred ---CCCceeEEEEcCC
Q 025534 172 ---RKESYDVIIGDLA 184 (251)
Q Consensus 172 ---~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1247899999875
No 436
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.07 E-value=1.3 Score=37.26 Aligned_cols=90 Identities=22% Similarity=0.177 Sum_probs=54.3
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
..+|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. .. ......|..+.+ +..|+|+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~---------~~~~~~~~~~~~----~~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GI---------VDEATADFKVFA----ALADVII 71 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TS---------CSEEESCTTTTG----GGCSEEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CC---------cccccCCHHHhh----cCCCEEE
Confidence 3589999998633 445555542125899999999888766552 11 001223322222 3689999
Q ss_pred EcCCCCCCCCcccCCccHHHHHHHHccc-CCCCcEEE
Q 025534 181 GDLADPIEGGPCYKLYTKSFYEFVVKPR-LNPEGIFV 216 (251)
Q Consensus 181 ~D~~~~~~~~p~~~l~~~ef~~~~~~~~-L~pgG~l~ 216 (251)
+..+.+. ..+.++. +... |+++.+++
T Consensus 72 lavp~~~---------~~~v~~~-l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIKK---------TIDFIKI-LADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHHH---------HHHHHHH-HHTSCCCTTCEEE
T ss_pred EcCCHHH---------HHHHHHH-HHhcCCCCCCEEE
Confidence 8865211 2566777 6777 88766555
No 437
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.96 E-value=0.87 Score=41.94 Aligned_cols=102 Identities=19% Similarity=0.311 Sum_probs=63.8
Q ss_pred CCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcc-cCCCCC------------CCeEEEEcchHH
Q 025534 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSD------------PRLELVINDARA 167 (251)
Q Consensus 103 ~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~------------~rv~~~~~D~~~ 167 (251)
.++|.+||+|. ++++..+++. + .+|+++|.+++.++.+++..... ...... .+++.. .|..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~- 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH- 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH-
Confidence 46899999986 3455666664 3 48999999999999887643210 000001 133332 3322
Q ss_pred HHhcCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 168 ~l~~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
-+ ...|+||...+... -...+++++ +.+.++|+.+++.|+.
T Consensus 81 ~~----~~aDlVIeAVpe~~-------~vk~~v~~~-l~~~~~~~~IlasntS 121 (483)
T 3mog_A 81 AL----AAADLVIEAASERL-------EVKKALFAQ-LAEVCPPQTLLTTNTS 121 (483)
T ss_dssp GG----GGCSEEEECCCCCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred Hh----cCCCEEEEcCCCcH-------HHHHHHHHH-HHHhhccCcEEEecCC
Confidence 12 46899999875321 123577888 7888999998887764
No 438
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.93 E-value=5.1 Score=36.38 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=59.1
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhch-hcccCCC-------CCCCeEEEEcchHHHHhcCC
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF-------SDPRLELVINDARAELESRK 173 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~-------~~~rv~~~~~D~~~~l~~~~ 173 (251)
.+|.+||+|.=+ ++..+++.....+|+++|++++.++..++.- +.....+ ...++++ ..|..+.+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~---- 80 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAI---- 80 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHH----
Confidence 589999998544 4555665521258999999999888765421 1000000 0012332 34444444
Q ss_pred CceeEEEEcCCCCCCCCc-----ccCC-ccHHHHHHHHcccCCCCcEEEE
Q 025534 174 ESYDVIIGDLADPIEGGP-----CYKL-YTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p-----~~~l-~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
+..|+|++..+.|..... ...+ +..+..+. +.+.|++|.+++.
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~ 129 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARR-IVQNSNGYKIVTE 129 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHTCCSEEEEEE
T ss_pred hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHH-HHhhCCCCCEEEE
Confidence 257999998765432100 0001 12455666 5778888666543
No 439
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.91 E-value=1.3 Score=40.15 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCCCeEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEE----cch------HHH
Q 025534 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI----NDA------RAE 168 (251)
Q Consensus 101 ~~~~~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~----~D~------~~~ 168 (251)
.++.+||++|+ |.|.++..+++..+ .++++++.+++-.+.+++.-...--...++.+.+.. .|. .+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 34678999997 34556777787765 588888999999999987411000000111110000 011 122
Q ss_pred Hhc-C-CCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 169 LES-R-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 169 l~~-~-~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+.+ + +..+|+|+-.. + .+.+.. ..+.|+++|.++.-.
T Consensus 306 i~~~t~g~g~Dvvid~~------G-------~~~~~~-~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHP------G-------RETFGA-SVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEECS------C-------HHHHHH-HHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEEcC------C-------chhHHH-HHHHhhCCcEEEEEe
Confidence 222 2 35899988542 1 134566 577899999988643
No 440
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.67 E-value=6.3 Score=32.29 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=49.0
Q ss_pred CCCeEEEEecCch--H---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH------HHh
Q 025534 102 NPKTIFIMGGGEG--S---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELE 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G--~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~------~l~ 170 (251)
+.++||+.|++++ . +++.+++. + .+|+.++.++...+.+++..... ...++.++..|..+ +++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-G-ARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-T-CEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-C-CEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 5688999998732 2 45666664 4 58999998876655555443322 12478888887643 221
Q ss_pred c---CCCceeEEEEcCC
Q 025534 171 S---RKESYDVIIGDLA 184 (251)
Q Consensus 171 ~---~~~~fD~Ii~D~~ 184 (251)
. .-++.|+++.++.
T Consensus 80 ~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeeEEEEccc
Confidence 1 1247899999874
No 441
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.65 E-value=1.6 Score=35.72 Aligned_cols=76 Identities=22% Similarity=0.284 Sum_probs=51.3
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... .+++.++..|..+. +..
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE-G-AAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999987663 45555554 3 58999999998877665554322 35788888887542 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247999999874
No 442
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.55 E-value=0.64 Score=40.84 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=57.3
Q ss_pred CCCCeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 101 PNPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 101 ~~~~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
+..++|.+||+|. +.++..+.+. + .+|+++|.+++.++.+++. .++ ...|..+.+....+..|+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~-G-~~V~~~dr~~~~~~~a~~~-----------G~~-~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAA-N-HSVFGYNRSRSGAKSAVDE-----------GFD-VSADLEATLQRAAAEDAL 71 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHT-----------TCC-EESCHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHc-----------CCe-eeCCHHHHHHhcccCCCE
Confidence 4457899999984 3455666554 3 5899999999988877653 111 134555555321124699
Q ss_pred EEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 179 Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
|++..+.. ...+.++. +... +|+. +++..+
T Consensus 72 VilavP~~---------~~~~vl~~-l~~~-~~~~-iv~Dv~ 101 (341)
T 3ktd_A 72 IVLAVPMT---------AIDSLLDA-VHTH-APNN-GFTDVV 101 (341)
T ss_dssp EEECSCHH---------HHHHHHHH-HHHH-CTTC-CEEECC
T ss_pred EEEeCCHH---------HHHHHHHH-HHcc-CCCC-EEEEcC
Confidence 99986521 13456666 5554 6654 444543
No 443
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.54 E-value=2.1 Score=37.02 Aligned_cols=75 Identities=29% Similarity=0.402 Sum_probs=48.9
Q ss_pred CCCeEEEEecCchHHHHH----HHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH--HhcCCCc
Q 025534 102 NPKTIFIMGGGEGSTARE----ILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKES 175 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~----l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~--l~~~~~~ 175 (251)
+.++||+.|+. |.++.. |++..+..+|++++.++.-.+..++.+. .++++++.+|..+. +...-+.
T Consensus 20 ~~k~vlVTGat-G~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~~~~ 91 (344)
T 2gn4_A 20 DNQTILITGGT-GSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYALEG 91 (344)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHHHhc
Confidence 46789999875 554444 4443233489999999876554443322 35799999998653 2222246
Q ss_pred eeEEEEcCC
Q 025534 176 YDVIIGDLA 184 (251)
Q Consensus 176 fD~Ii~D~~ 184 (251)
.|+||..+.
T Consensus 92 ~D~Vih~Aa 100 (344)
T 2gn4_A 92 VDICIHAAA 100 (344)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899999875
No 444
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=88.51 E-value=0.26 Score=43.49 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=32.0
Q ss_pred cchhHHHHHHHhHhh--cCCCCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECCh
Q 025534 84 DEFIYHESLVHPALL--HHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDE 136 (251)
Q Consensus 84 ~~~~y~e~l~~~~~~--~~~~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~ 136 (251)
+..+|.+.+..+... ......+||++|+|+-+ ++..|+. .++.+++.+|-|.
T Consensus 15 ~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~-~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 15 EAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLIL-AGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred HHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHH-cCCCEEEEEECCC
Confidence 345788766432211 11246899999997432 3444554 4688999998764
No 445
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.44 E-value=6.4 Score=34.19 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=57.9
Q ss_pred CCCCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 100 HPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 100 ~~~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
...+.+|.++|+|.=+ ++..++...-..++..+|++++.++--..-+.... .+. +++++..+|...+ ...|
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a~-----~~aD 78 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSDA-----KDAD 78 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGGG-----TTCS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHHh-----cCCC
Confidence 3466899999986422 33344444333589999999886663222111100 011 3566666653321 4689
Q ss_pred EEEEcCCCCCCCCc-ccCCcc------HHHHHHHHcccCCCCcEEEEecC
Q 025534 178 VIIGDLADPIEGGP-CYKLYT------KSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p-~~~l~~------~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
+|++-+..|...+. ...|+. .+..+. +.+ ..|++++++-++
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~-i~~-~~p~a~ilvvtN 126 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDP-IVD-SGFNGIFLVAAN 126 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHH-HHT-TTCCSEEEECSS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHH-HHh-cCCceEEEEccC
Confidence 99987643321111 112221 345555 344 579998876543
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.42 E-value=1.1 Score=36.18 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=45.0
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCe-EEEEcchHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL-ELVINDARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv-~~~~~D~~~~l~~~~~~fD 177 (251)
.+++||+.|+.+|. +++.|++. + .+|++++.++.-.+...+ .++ +++.+|..+.+.+.-+..|
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~-G-~~V~~~~R~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK-G-HEPVAMVRNEEQGPELRE-----------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESSGGGHHHHHH-----------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC-C-CeEEEEECChHHHHHHHh-----------CCCceEEEcccHHHHHHHHcCCC
Confidence 56889999975432 33444443 3 589999999875543322 357 8888887622222225799
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
+||..+.
T Consensus 87 ~vi~~ag 93 (236)
T 3e8x_A 87 AVVFAAG 93 (236)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998875
No 447
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.41 E-value=2.2 Score=34.36 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=47.2
Q ss_pred CeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH------HHhcCCC
Q 025534 104 KTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELESRKE 174 (251)
Q Consensus 104 ~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~------~l~~~~~ 174 (251)
++||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+ ..++.++..|..+ .+....+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE-G-KATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred CEEEEecCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHHhh
Confidence 468999987664 44555554 3 57999999998877665543 2456777767543 3333446
Q ss_pred ceeEEEEcCC
Q 025534 175 SYDVIIGDLA 184 (251)
Q Consensus 175 ~fD~Ii~D~~ 184 (251)
.+|+++.++.
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799998875
No 448
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.19 E-value=2.4 Score=36.40 Aligned_cols=99 Identities=17% Similarity=0.247 Sum_probs=58.5
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhc-hhcccCCC-CCCCeEEEEcchHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAF-SDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
...+|.+||+|.-+ ++..+++. + .+|+.+ .+++.++..++. +....... ...+++. ..|... + +.+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G-~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~-~----~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-G-HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA-V----QGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-T-CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG-G----TTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-C-CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH-c----CCCC
Confidence 45789999998644 44555553 3 489999 999888877653 21110000 0011221 233221 1 4799
Q ss_pred EEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 178 ~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+|++-.+.. ...+.++. ++..++++.+++...
T Consensus 89 ~vilavk~~---------~~~~~l~~-l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 89 LVLFCVKST---------DTQSAALA-MKPALAKSALVLSLQ 120 (318)
T ss_dssp EEEECCCGG---------GHHHHHHH-HTTTSCTTCEEEEEC
T ss_pred EEEEEcccc---------cHHHHHHH-HHHhcCCCCEEEEeC
Confidence 999986421 24678888 799999988766443
No 449
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.07 E-value=4.1 Score=32.15 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=43.2
Q ss_pred eEEEEecCchHHH----HHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025534 105 TIFIMGGGEGSTA----REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (251)
Q Consensus 105 ~VL~iG~G~G~~~----~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 180 (251)
+||+.|+. |.++ ..|++. + .+|+++..++.-.+.. ..++++++.+|..+.-...-+..|+||
T Consensus 2 kilVtGat-G~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~d~vi 67 (224)
T 3h2s_A 2 KIAVLGAT-GRAGSAIVAEARRR-G-HEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEADLDSVDAVV 67 (224)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHHHTTCSEEE
T ss_pred EEEEEcCC-CHHHHHHHHHHHHC-C-CEEEEEEecccccccc-----------cCCCceEEecccccccHhhcccCCEEE
Confidence 68999975 4443 444443 3 5899999998654422 125788999997653211114689999
Q ss_pred EcCCC
Q 025534 181 GDLAD 185 (251)
Q Consensus 181 ~D~~~ 185 (251)
..+..
T Consensus 68 ~~ag~ 72 (224)
T 3h2s_A 68 DALSV 72 (224)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 88754
No 450
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.88 E-value=7.5 Score=31.94 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=51.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
+.+.||+.|+++|. +++.+++. + .+|..++.+++-++...+.+... ..++.++..|..+. ++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-G-ADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-c-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56889999987764 45566654 3 58999999988777665544322 35788888886542 21
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|++|.++.
T Consensus 83 ~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 83 MKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 12357999999873
No 451
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=87.71 E-value=4.1 Score=34.07 Aligned_cols=72 Identities=25% Similarity=0.311 Sum_probs=49.9
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------HhcC
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LESR 172 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~~ 172 (251)
++++||+.|+++|. +++.+++. + .+|.+++.++.-.+.+.+.+ ..++.++..|..+. ++..
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR-G-ATVIMAVRDTRKGEAAARTM--------AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHTTS--------SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHh--------cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 56889999987664 44555554 3 58999999988777665433 24788888886532 2222
Q ss_pred CCceeEEEEcCC
Q 025534 173 KESYDVIIGDLA 184 (251)
Q Consensus 173 ~~~fD~Ii~D~~ 184 (251)
++.|++|.++-
T Consensus 85 -~~iD~lv~nAg 95 (291)
T 3rd5_A 85 -SGADVLINNAG 95 (291)
T ss_dssp -CCEEEEEECCC
T ss_pred -CCCCEEEECCc
Confidence 57899999874
No 452
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.70 E-value=5.6 Score=33.44 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=45.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECCh--HHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDE--EVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~--~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~ 170 (251)
+.+.||+.|+++|. +++.+++. + .+|..++.+. ...+...+..... ..++.++..|..+. ++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~-G-~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE-G-ADVAINYLPAEEEDAQQVKALIEEC-----GRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEECCGGGHHHHHHHHHHHHHT-----TCCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCcchhHHHHHHHHHHHc-----CCcEEEEEecCCCHHHHHHHHH
Confidence 46789999987664 44555554 3 5899888873 3333333322221 24677877776432 21
Q ss_pred c---CCCceeEEEEcCC
Q 025534 171 S---RKESYDVIIGDLA 184 (251)
Q Consensus 171 ~---~~~~fD~Ii~D~~ 184 (251)
. .-++.|+++.++-
T Consensus 121 ~~~~~~g~iD~lv~nAg 137 (294)
T 3r3s_A 121 KAREALGGLDILALVAG 137 (294)
T ss_dssp HHHHHHTCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1 1257899999875
No 453
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.55 E-value=2.2 Score=35.14 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=51.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.+.||+.|+++|. +++.+++. + .+|..++.+++-.+...+.+... ..++.++..|..+. ++.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA-G-ASVVVTDLKSEGAEAVAAAIRQA-----GGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH-T-CEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 56789999987664 45555555 3 58999999998777665554422 35788888886542 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 84 ~~~~g~id~lv~nAg 98 (256)
T 3gaf_A 84 LDQFGKITVLVNNAG 98 (256)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247999999875
No 454
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.54 E-value=4.1 Score=35.73 Aligned_cols=97 Identities=19% Similarity=0.154 Sum_probs=61.5
Q ss_pred CCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchh----cccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025534 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV----VNKEAFSDPRLELVINDARAELESRKESY 176 (251)
Q Consensus 103 ~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~----~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 176 (251)
..+|.+||+|.-+ ++..+++. + .+|+.++.+++.++..++.-. +++.. ..+++++ ..|..+.+ +..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-G-~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~-l~~~i~~-t~d~~ea~----~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-G-QKVRLWSYESDHVDEMQAEGVNNRYLPNYP-FPETLKA-YCDLKASL----EGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-T-CCEEEECSCHHHHHHHHHHSSBTTTBTTCC-CCTTEEE-ESCHHHHH----TTC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHHHHcCCCcccCCCCc-cCCCeEE-ECCHHHHH----hcC
Confidence 4689999998654 34455543 3 479999999998887665311 11111 1234443 35655544 358
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
|+|++..+.. ..++.++. ++..|+|+-+++.
T Consensus 101 DvVilaVp~~---------~~~~vl~~-i~~~l~~~~ivvs 131 (356)
T 3k96_A 101 TDILIVVPSF---------AFHEVITR-MKPLIDAKTRIAW 131 (356)
T ss_dssp CEEEECCCHH---------HHHHHHHH-HGGGCCTTCEEEE
T ss_pred CEEEECCCHH---------HHHHHHHH-HHHhcCCCCEEEE
Confidence 9999886421 34677888 7888998876654
No 455
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.53 E-value=6.7 Score=32.71 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=52.4
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.|.+|+-|++.|. +++.+++. + .+|..++.+++-++...+.+... ..++..+..|..+. +++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-G-a~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-D-SIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56888999987775 45555554 4 68999999998887766655432 25678888876432 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 2267999999874
No 456
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=87.41 E-value=2.7 Score=38.14 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=52.3
Q ss_pred CCCCeEEEEecCchHH-HHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
..+++|.++|.|.=+. ....++..+ .+|+++|.++.-...+... .+++ .+..+.+ ...|+|
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~G-a~Viv~D~~p~~a~~A~~~-----------G~~~--~sL~eal----~~ADVV 270 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFG-ARVVVTEVDPINALQAAME-----------GYQV--LLVEDVV----EEAHIF 270 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-----------TCEE--CCHHHHT----TTCSEE
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEECCChhhhHHHHHh-----------CCee--cCHHHHH----hhCCEE
Confidence 3578999999986432 223333345 5899999999665544431 1121 2444544 368999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
+..... ..+.+.+ ..+.+|+|.++ +|.+.+
T Consensus 271 ilt~gt-------~~iI~~e-----~l~~MK~gAIV-INvgRg 300 (436)
T 3h9u_A 271 VTTTGN-------DDIITSE-----HFPRMRDDAIV-CNIGHF 300 (436)
T ss_dssp EECSSC-------SCSBCTT-----TGGGCCTTEEE-EECSSS
T ss_pred EECCCC-------cCccCHH-----HHhhcCCCcEE-EEeCCC
Confidence 974321 1233332 23567877655 577644
No 457
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.36 E-value=2.9 Score=34.94 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=50.2
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
.++.||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-G-IAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987664 45555554 3 58999999998777665544321 35788888886532 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 96 ~~~~g~id~lv~nAg 110 (279)
T 3sju_A 96 VERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHCSCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 1247899999875
No 458
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.30 E-value=3.9 Score=33.88 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=48.6
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
..++||+.|+++|. +++.+++. + .+|++++.++.-.+...+.+... ..++.++..|..+. +.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKL-K-SKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-C-CEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 45789999986553 34444544 3 58999999987766554433321 24788888886432 11
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|+||.++.
T Consensus 103 ~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 103 KAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHTCCCSEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 11247999999875
No 459
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=87.20 E-value=5.5 Score=34.16 Aligned_cols=70 Identities=23% Similarity=0.365 Sum_probs=42.9
Q ss_pred CCCeEEEEecCchH--HHHHHH-hcCCCcEE-EEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025534 102 NPKTIFIMGGGEGS--TAREIL-RHKTVEKV-VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~-~~~~~~~v-~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 177 (251)
++.+|.+||+|.=+ .+..+. +.++ .++ .++|.+++-.+.+.+.++ +.....|..+.+.. ...|
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~-~~~vav~d~~~~~~~~~a~~~g----------~~~~~~~~~~~l~~--~~~D 73 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQG-VKLVAACALDSNQLEWAKNELG----------VETTYTNYKDMIDT--ENID 73 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSS-EEEEEEECSCHHHHHHHHHTTC----------CSEEESCHHHHHTT--SCCS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCC-cEEEEEecCCHHHHHHHHHHhC----------CCcccCCHHHHhcC--CCCC
Confidence 45689999998533 234444 3444 454 567999987765443321 11234677777642 4699
Q ss_pred EEEEcCC
Q 025534 178 VIIGDLA 184 (251)
Q Consensus 178 ~Ii~D~~ 184 (251)
+|++..+
T Consensus 74 ~V~i~tp 80 (346)
T 3cea_A 74 AIFIVAP 80 (346)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9998765
No 460
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.17 E-value=5.7 Score=34.18 Aligned_cols=110 Identities=15% Similarity=0.240 Sum_probs=56.7
Q ss_pred CCCeEEEEecCchHHH--HHHHhcCCCcEEEEEECChHHHHH-HHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025534 102 NPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~-a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 178 (251)
.+.+|.+||+|.-+.+ ..++...-..++..+|++++.++- +...-.... +...++++..++... + ..-|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~--~~~~~~~v~~~~~~a-~----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP--YSPTTVRVKAGEYSD-C----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGG--GSSSCCEEEECCGGG-G----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhh--hcCCCeEEEeCCHHH-h----CCCCE
Confidence 3568999999765543 333333323589999999865552 221101000 111345555544222 2 46899
Q ss_pred EEEcCCCCCCCCcc-cC--Ccc----HHHHHHHHcccCCCCcEEEEecC
Q 025534 179 IIGDLADPIEGGPC-YK--LYT----KSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 179 Ii~D~~~~~~~~p~-~~--l~~----~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
|++-...|...+.. .. ..+ .++.+. +.+. +|++++++-++
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGE-VMAS-KFDGIFLVATN 124 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHH-HHHT-TCCSEEEECSS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHH-HHHh-CCCcEEEEecC
Confidence 99987644311110 00 111 223333 2333 89999887443
No 461
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.16 E-value=2.1 Score=35.33 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. +..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSL-G-ARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHH
Confidence 45789999987653 34555554 3 58999999998877666554422 35788888886432 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++.
T Consensus 101 ~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1247999999875
No 462
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.11 E-value=2 Score=37.70 Aligned_cols=69 Identities=25% Similarity=0.405 Sum_probs=40.0
Q ss_pred CCCeEEEEecCchHHHHHHHhc-CCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH--HHhcCCCceeE
Q 025534 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~--~l~~~~~~fD~ 178 (251)
+..|||+||+| .+++.+++. ....+|+.+|++.+-++.+++.. +.+..|+.+ -+...-+..|+
T Consensus 15 ~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~------------~~~~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 15 RHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFA------------TPLKVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTS------------EEEECCTTCHHHHHHHHTTCSE
T ss_pred CccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccC------------CcEEEecCCHHHHHHHHhCCCE
Confidence 45689999984 333333321 12258999999998887766432 223333321 22222246899
Q ss_pred EEEcCC
Q 025534 179 IIGDLA 184 (251)
Q Consensus 179 Ii~D~~ 184 (251)
|++-.+
T Consensus 81 Vi~~~p 86 (365)
T 3abi_A 81 VIGALP 86 (365)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 998654
No 463
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.04 E-value=2.8 Score=35.52 Aligned_cols=76 Identities=22% Similarity=0.311 Sum_probs=52.0
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+++.||+.|+++|. +++.+++. + .+|.+++.+++-++.+.+.+... ..++.++..|..+. +..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR-G-ARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence 56789999988663 45555554 3 58999999998887766555422 35788888886542 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 103 ~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 1247999999875
No 464
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.99 E-value=1.8 Score=38.02 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=25.5
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECCh
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDE 136 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~ 136 (251)
...+||++|+|+-+ ++..|++ .++.+++.||-|.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 36899999998543 4555555 4789999999875
No 465
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=86.98 E-value=8.4 Score=31.94 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=51.6
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..++||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+...+ ....++.++..|..+. ++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA-G-ASVMIVGRNPDKLAGAVQELEALG--ANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTTC--CSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHHhC--CCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 56789999987664 45555554 3 589999999987776655443221 0123788888886542 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 86 ~~~~g~id~lv~nAg 100 (281)
T 3svt_A 86 TAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247899999875
No 466
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.80 E-value=0.71 Score=39.69 Aligned_cols=90 Identities=17% Similarity=0.327 Sum_probs=54.9
Q ss_pred eEEEEec--CchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEc-ch-HHHHhc-CCCceeEE
Q 025534 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DA-RAELES-RKESYDVI 179 (251)
Q Consensus 105 ~VL~iG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~-D~-~~~l~~-~~~~fD~I 179 (251)
+||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. + .++.. |. .+.++. ....+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 8999997 44556677777655 4799999998888888763 21 0 11111 10 011111 23469998
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEec
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
+-... . +.+.. ..+.|+++|+++.-.
T Consensus 222 id~~g-----~--------~~~~~-~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVG-----G--------KQLAS-LLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCC-----T--------HHHHH-HHTTEEEEEEEEECC
T ss_pred EECCc-----H--------HHHHH-HHHhhcCCCEEEEEe
Confidence 85431 1 23556 578999999988643
No 467
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.72 E-value=2.7 Score=34.54 Aligned_cols=79 Identities=13% Similarity=0.167 Sum_probs=51.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..+.+|+.|+++|. +++.+++. + .+|..++.+++-.+...+.+..... ...++.++..|..+. +..
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-G-YRVVLIARSKQNLEKVHDEIMRSNK--HVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-T-CEEEEEESCHHHHHHHHHHHHHHCT--TSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHHhcc--ccCcceEEeccCCCHHHHHHHHHHH
Confidence 56789999987664 45566665 3 5899999999877766554432110 125678888876542 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 82 ~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 82 HQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHCCEEEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1257999999875
No 468
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.72 E-value=3.2 Score=34.40 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=48.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECC------------hHHHHHHHhchhcccCCCCCCCeEEEEcchH
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDID------------EEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid------------~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~ 166 (251)
.++.||+.|+++|. +++.+++. + .+|.+++.+ ++-++...+.+... ..++.++..|..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD-G-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-----GSRIVARQADVR 84 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-----TCCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CeEEEEecccccccccccccchHHHHHHHHHHHhc-----CCeEEEEeCCCC
Confidence 56789999987664 45555554 3 589999987 55555444433322 257888888864
Q ss_pred HH------Hhc---CCCceeEEEEcCC
Q 025534 167 AE------LES---RKESYDVIIGDLA 184 (251)
Q Consensus 167 ~~------l~~---~~~~fD~Ii~D~~ 184 (251)
+. +.. .-++.|++|.++-
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 32 211 1247999999875
No 469
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=86.68 E-value=5.9 Score=36.19 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=52.7
Q ss_pred CCCCeEEEEecCch-HHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 101 ~~~~~VL~iG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
..+++|+++|+|.= ......++..+ .+|+++|+||.-...+... .+++ .+..+.+ ...|+|
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafG-a~Viv~d~dp~~a~~A~~~-----------G~~v--v~LeElL----~~ADIV 306 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAG-ARVKVTEVDPICALQAAMD-----------GFEV--VTLDDAA----STADIV 306 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHT-----------TCEE--CCHHHHG----GGCSEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEeCCcchhhHHHhc-----------Ccee--ccHHHHH----hhCCEE
Confidence 46799999999862 22233334345 5899999999654333321 1222 2333444 368998
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCC
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p 222 (251)
+.... ..++.+.+.++. +|+|+++ +|.+..
T Consensus 307 v~atg-------t~~lI~~e~l~~-----MK~GAIL-INvGRg 336 (464)
T 3n58_A 307 VTTTG-------NKDVITIDHMRK-----MKDMCIV-GNIGHF 336 (464)
T ss_dssp EECCS-------SSSSBCHHHHHH-----SCTTEEE-EECSSS
T ss_pred EECCC-------CccccCHHHHhc-----CCCCeEE-EEcCCC
Confidence 87421 134666665554 6776655 477543
No 470
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=86.65 E-value=0.52 Score=40.45 Aligned_cols=68 Identities=19% Similarity=0.183 Sum_probs=42.1
Q ss_pred CceeEEEEcCCCCCCCCcc-----cCCccHH-HHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCceee
Q 025534 174 ESYDVIIGDLADPIEGGPC-----YKLYTKS-FYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGYN 247 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~~~p~-----~~l~~~e-f~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v~~ 247 (251)
++||+|++|...+.. +-. .+.-... .... ..++|+|||.+++..-. ...+....+...|++.|..+..
T Consensus 205 ~k~DvV~SDMApn~s-Gh~yqQC~DHarii~Lal~f-A~~vLkPGGtfV~Kvyg----gaDr~se~lv~~LaR~F~~Vr~ 278 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYK-YHHYQQCEDHAIKLSMLTKK-ACLHLNPGGTCVSIGYG----YADRASESIIGAIARQFKFSRV 278 (320)
T ss_dssp CCEEEEEEECCCCCC-SCHHHHHHHHHHHHHHTHHH-HGGGEEEEEEEEEEECC----CCSHHHHHHHHHHHTTEEEEEE
T ss_pred CcCCEEEEcCCCCCC-CccccccchHHHHHHHHHHH-HHHhcCCCceEEEEEec----CCcccHHHHHHHHHHhcceeee
Confidence 679999999864432 110 0000000 2233 36899999999987621 1233557888999999987753
No 471
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.62 E-value=2.5 Score=34.75 Aligned_cols=76 Identities=24% Similarity=0.316 Sum_probs=51.2
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+... ..++.++..|..+. ++.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKE-G-ARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 45789999987664 45555554 3 58999999998877766554321 35788888886532 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247899999875
No 472
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.57 E-value=3.2 Score=33.75 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=49.4
Q ss_pred CCCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHH------HHhc
Q 025534 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELES 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~------~l~~ 171 (251)
.+.++||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+. .++.++..|..+ .+++
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL-G-SKVIISGSNEEKLKSLGNALK--------DNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHC--------SSEEEEECCTTSHHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHhc--------cCccEEEcCCCCHHHHHHHHHh
Confidence 456889999987664 44555554 3 589999999887766554331 367777777643 2222
Q ss_pred CCCceeEEEEcCC
Q 025534 172 RKESYDVIIGDLA 184 (251)
Q Consensus 172 ~~~~fD~Ii~D~~ 184 (251)
-.+.|+++.++.
T Consensus 82 -~~~id~li~~Ag 93 (249)
T 3f9i_A 82 -TSNLDILVCNAG 93 (249)
T ss_dssp -CSCCSEEEECCC
T ss_pred -cCCCCEEEECCC
Confidence 257999999875
No 473
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.38 E-value=0.61 Score=41.08 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=26.6
Q ss_pred CCeEEEEecCchHHH--HHHHhcCCCcEEEEEECChH
Q 025534 103 PKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEE 137 (251)
Q Consensus 103 ~~~VL~iG~G~G~~~--~~l~~~~~~~~v~~VEid~~ 137 (251)
+|||++||+|.+++. ..|.+..+..+|+.||-++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 689999999998864 44655544468999998753
No 474
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.37 E-value=4.3 Score=33.75 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=48.1
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. +.
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKE-G-LRVFVCARGEEGLRTTLKELREA-----GVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 45789999987653 34455554 3 58999999987666544433221 24678888776432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|++|.++-
T Consensus 94 ~~~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 94 VERYGPVDVLVNNAG 108 (277)
T ss_dssp HHHTCSCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 11247999999875
No 475
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=86.27 E-value=8.9 Score=32.02 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=51.1
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
.++.||+.|+++|. +++.+++. + .+|..++.+++-++...+.+.. ...++.++..|..+. +++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAAD-G-VTVGALGRTRTEVEEVADEIVG-----AGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESSHHHHHHHHHHHTT-----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 46789999987664 44555554 3 5899999999877766554432 135788888887542 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 100 ~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 100 VLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 1247999999875
No 476
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.25 E-value=3.6 Score=36.35 Aligned_cols=119 Identities=8% Similarity=0.094 Sum_probs=72.5
Q ss_pred CCCeEEEEecCchHHHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 102 ~~~~VL~iG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
...+||+|+-+-|+++..++.+ .++.+.=+-..-...+.++..++ +...++++... ++.....||+|++
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~--~~~~~~~~~~~-----~~~~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNG--IDESSVKFLDS-----TADYPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTT--CCGGGSEEEET-----TSCCCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcC--CCccceEeccc-----ccccccCCCEEEE
Confidence 3468999999999999888754 23455434434445566776553 22334665433 2234578999999
Q ss_pred cCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCCCCCCCChHHHHHHHHHHHhhCCce
Q 025534 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (251)
Q Consensus 182 D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~p~~~~~~~~~~~i~~~l~~~F~~v 245 (251)
-.+... . .....+.. +...|++|+.+++-.. ......++.+.|.+.|..+
T Consensus 107 ~lpk~~-----~--~l~~~L~~-l~~~l~~~~~i~~~g~------~~~~~~~~~~~l~~~~~~~ 156 (375)
T 4dcm_A 107 KVPKTL-----A--LLEQQLRA-LRKVVTSDTRIIAGAK------ARDIHTSTLELFEKVLGPT 156 (375)
T ss_dssp ECCSCH-----H--HHHHHHHH-HHTTCCTTSEEEEEEE------GGGCCHHHHHHHHHHTCCE
T ss_pred EcCCCH-----H--HHHHHHHH-HHhhCCCCCEEEEEec------ccchHHHHHHHHHhhcCcc
Confidence 876321 1 12345666 6889999998876431 1222345666666666543
No 477
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.24 E-value=5.9 Score=34.04 Aligned_cols=105 Identities=25% Similarity=0.301 Sum_probs=56.5
Q ss_pred eEEEEecCchHH--HHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 105 TIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 105 ~VL~iG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
+|.+||+|.=+. +..+++.....+|+.+|++++.++.....+..... +. ...++...|. +-+ ...|+|++-
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~-~~~~i~~~d~-~~~----~~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT-RRANIYAGDY-ADL----KGSDVVIVA 74 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS-CCCEEEECCG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc-CCcEEEeCCH-HHh----CCCCEEEEc
Confidence 689999976443 34444433234899999999877654432211000 01 2234444452 222 468999998
Q ss_pred CCCCCCCCccc-C--Cc------cHHHHHHHHcccCCCCcEEEEecC
Q 025534 183 LADPIEGGPCY-K--LY------TKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 183 ~~~~~~~~p~~-~--l~------~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
.+.+. .|.. . +. -.+.++. +.+. .|++++++-++
T Consensus 75 v~~~~--~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~~~~~ii~~tN 117 (319)
T 1a5z_A 75 AGVPQ--KPGETRLQLLGRNARVMKEIARN-VSKY-APDSIVIVVTN 117 (319)
T ss_dssp CCCCC--CSSCCHHHHHHHHHHHHHHHHHH-HHHH-CTTCEEEECSS
T ss_pred cCCCC--CCCCCHHHHHHHHHHHHHHHHHH-HHhh-CCCeEEEEeCC
Confidence 77543 1210 0 10 1355555 4544 58998876443
No 478
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.18 E-value=2.2 Score=35.35 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=51.4
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
.+++||+.|+++|. +++.+++. + .+|..++.+++-.+.+.+.+... ...++.++..|..+. ++.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA-G-ANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56889999987664 45555554 3 58999999998877665544322 125788888887542 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+++.++-
T Consensus 83 ~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 83 VEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 1247999999875
No 479
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=86.16 E-value=3.9 Score=33.29 Aligned_cols=76 Identities=14% Similarity=0.307 Sum_probs=47.9
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.++||+.|+++|. +++.+++. + .+|.+++.++.-.+...+.+... ..+++++..|..+. ++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA-G-ARVIIADLDEAMATKAVEDLRME-----GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 46789999886553 34445554 3 58999999987665444433221 24688888886542 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
..++.|+||.++.
T Consensus 85 ~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 85 HEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1146899999874
No 480
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=86.10 E-value=1.4 Score=37.35 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=50.9
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
+++.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ...++.++..|..+. ++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARA-G-ANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-T-CEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 56789999987664 45555554 4 58999999987766655544322 125788888887643 11
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|++|.++-
T Consensus 114 ~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 114 VDAFGALDVVCANAG 128 (293)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899999875
No 481
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.03 E-value=9.6 Score=33.12 Aligned_cols=110 Identities=16% Similarity=0.155 Sum_probs=57.6
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEE-EcchHHHHhcCCCceeE
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELESRKESYDV 178 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~-~~D~~~~l~~~~~~fD~ 178 (251)
+..+|.+||+|.-+ ++..++...-..++..+|++++.++--..-+.... .+. ...+++ .+|..+ -...|+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~-~~~-~~~~i~~~~d~~~-----~~~aDi 90 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS-LFL-KTPKIVSSKDYSV-----TANSKL 90 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG-GGC-SCCEEEECSSGGG-----GTTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh-hcc-CCCeEEEcCCHHH-----hCCCCE
Confidence 45799999997533 34555554333589999999876553221111000 011 122333 445322 256999
Q ss_pred EEEcCCCCCCCCc-ccCCcc------HHHHHHHHcccCCCCcEEEEecC
Q 025534 179 IIGDLADPIEGGP-CYKLYT------KSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 179 Ii~D~~~~~~~~p-~~~l~~------~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
|++-.-.|...+. ...|+. .++.+. +.+. .|++++++-++
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~-i~~~-~p~a~vlvvtN 137 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPN-VVKY-SPQCKLLIVSN 137 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHH-HHHH-CTTCEEEECSS
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHH-HHHH-CCCeEEEEecC
Confidence 9986543321111 112322 244455 4554 89999887554
No 482
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.00 E-value=5.5 Score=32.66 Aligned_cols=73 Identities=22% Similarity=0.332 Sum_probs=48.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
+.++||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+ .+++.++..|..+. ++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE-G-ATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHHH
Confidence 56789999987663 45555554 3 58999999988766554432 24577777776432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025534 171 -SRKESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~~~fD~Ii~D~~ 184 (251)
+.-++.|+++.++.
T Consensus 77 ~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 77 VEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHSSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 12247999999875
No 483
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.97 E-value=4 Score=33.57 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=48.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..++||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. +..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEE-G-TAIALLDMNREALEKAEASVREK-----GVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT-----TSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 45789999987664 44555554 3 58999999987766554443321 24678888886432 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 79 ~~~~g~id~lv~nAg 93 (262)
T 1zem_A 79 VRDFGKIDFLFNNAG 93 (262)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 1247899999874
No 484
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.88 E-value=11 Score=32.94 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=59.7
Q ss_pred CCCeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025534 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (251)
Q Consensus 102 ~~~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 179 (251)
+..+|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+.+. .+. ...|..+.+... ++.|+|
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~-G-~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a-~~~DvV 85 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG-G-HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL-VKPRVV 85 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS-CSSCEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC-CCCCEE
Confidence 34689999998543 45555554 3 5899999999888766542 111 124556666432 457999
Q ss_pred EEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEE
Q 025534 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (251)
Q Consensus 180 i~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~ 217 (251)
++-.+.+ ...+.++. +...|++|.+++-
T Consensus 86 i~~vp~~---------~v~~vl~~-l~~~l~~g~iiId 113 (358)
T 4e21_A 86 WLMVPAA---------VVDSMLQR-MTPLLAANDIVID 113 (358)
T ss_dssp EECSCGG---------GHHHHHHH-HGGGCCTTCEEEE
T ss_pred EEeCCHH---------HHHHHHHH-HHhhCCCCCEEEe
Confidence 9986532 24567787 7888988776653
No 485
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=85.79 E-value=2.5 Score=41.02 Aligned_cols=102 Identities=17% Similarity=0.287 Sum_probs=65.8
Q ss_pred CeEEEEecCchHH--HHHHHhcCCCcEEEEEECChHHHHHHHhchhcc-----------cCCCCCCCeEEEEcchHHHHh
Q 025534 104 KTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-----------KEAFSDPRLELVINDARAELE 170 (251)
Q Consensus 104 ~~VL~iG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-----------~~~~~~~rv~~~~~D~~~~l~ 170 (251)
++|-+||+|+-+. +..++.. + ..|+.+|++++.++.+++..... .......++++ ..|. +-+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G-~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~l- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-G-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCG-GGG-
T ss_pred cEEEEEcccHHHHHHHHHHHhC-C-CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcH-HHH-
Confidence 6899999998654 4444443 3 58999999999998887654211 11011123322 2222 222
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecCC
Q 025534 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (251)
Q Consensus 171 ~~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~~ 221 (251)
...|+||-..+... -.-++.|++ +.++++|+.+|+.|+.+
T Consensus 392 ---~~aDlVIEAV~E~l-------~iK~~vf~~-le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 ---STVDLVVEAVFEDM-------NLKKKVFAE-LSALCKPGAFLCTNTSA 431 (742)
T ss_dssp ---GSCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCSS
T ss_pred ---hhCCEEEEeccccH-------HHHHHHHHH-HhhcCCCCceEEecCCc
Confidence 35799998776421 124688999 79999999999998753
No 486
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.75 E-value=8.1 Score=34.66 Aligned_cols=105 Identities=15% Similarity=0.130 Sum_probs=59.1
Q ss_pred eEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhc-hhcccCCCC--------CCCeEEEEcchHHHHhcCC
Q 025534 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFS--------DPRLELVINDARAELESRK 173 (251)
Q Consensus 105 ~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~~--------~~rv~~~~~D~~~~l~~~~ 173 (251)
+|.+||+|.=+ ++..+++. + .+|+++|.+++.++..++. .+.....+. ..++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-G-HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 68999998543 44555554 3 4899999999998877652 111100000 123433 345444342
Q ss_pred CceeEEEEcCCCCCC-CCcccCCccHHHHHHHHcccCCC---CcEEEE
Q 025534 174 ESYDVIIGDLADPIE-GGPCYKLYTKSFYEFVVKPRLNP---EGIFVT 217 (251)
Q Consensus 174 ~~fD~Ii~D~~~~~~-~~p~~~l~~~ef~~~~~~~~L~p---gG~l~~ 217 (251)
..|+|++..+.|.. .+...--+..+.++. +.+.|++ +.+++.
T Consensus 76 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 76 -DSDVSFICVGTPSKKNGDLDLGYIETVCRE-IGFAIREKSERHTVVV 121 (436)
T ss_dssp -TCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHHTTCCSCCEEEE
T ss_pred -cCCEEEEEcCCCcccCCCcchHHHHHHHHH-HHHHhcccCCCcEEEE
Confidence 57999998865431 111111123566677 6778888 555553
No 487
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.72 E-value=3 Score=34.59 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=49.4
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEEC-ChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDI-DEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEi-d~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~- 170 (251)
.+++||+.|+++|. +++.+++. + .+|.+++. +++..+...+.+... ..++.++..|..+. ++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASM-G-LKVWINYRSNAEVADALKNELEEK-----GYKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHT-T-CEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHH
Confidence 56789999987664 45555554 3 58988888 566656555544322 35788888886432 21
Q ss_pred --cCCCceeEEEEcCC
Q 025534 171 --SRKESYDVIIGDLA 184 (251)
Q Consensus 171 --~~~~~fD~Ii~D~~ 184 (251)
+..++.|++|.++-
T Consensus 101 ~~~~~g~id~li~nAg 116 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAG 116 (271)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 12257999999875
No 488
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=85.60 E-value=4.8 Score=33.69 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=49.0
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.++||+.|+++|. +++.+++. + .+|++++.+++-.+...+.+..........++.++..|..+. +..
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLEL-G-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 45789999986553 34445554 3 589999999876665544332110000135788888886532 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|+||.++.
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1136999999875
No 489
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=85.42 E-value=4.4 Score=33.10 Aligned_cols=73 Identities=23% Similarity=0.322 Sum_probs=49.6
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
+.++||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+ ..++.++..|..+. +..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG-G-AKVVIVDRDKAGAERVAGEI--------GDAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHHH
Confidence 56789999998664 45666664 3 58999999998777655432 24677888776432 211
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 78 ~~~~g~id~li~~Ag 92 (261)
T 3n74_A 78 LSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 1247899999875
No 490
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.27 E-value=4.3 Score=31.87 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=42.1
Q ss_pred eEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025534 105 TIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (251)
Q Consensus 105 ~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 181 (251)
+||+.|+.++. ++..|++. + .+|+++..++.-.+... ++++++.+|..+.-...-+..|+||.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~------------~~~~~~~~D~~d~~~~~~~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-G-HEVTAIVRNAGKITQTH------------KDINILQKDIFDLTLSDLSDQNVVVD 67 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCSHHHHHHC------------SSSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred eEEEEcCCchhHHHHHHHHHhC-C-CEEEEEEcCchhhhhcc------------CCCeEEeccccChhhhhhcCCCEEEE
Confidence 68999974332 33444443 3 58999999876543211 46788888876532111146899998
Q ss_pred cCCC
Q 025534 182 DLAD 185 (251)
Q Consensus 182 D~~~ 185 (251)
.+..
T Consensus 68 ~ag~ 71 (221)
T 3ew7_A 68 AYGI 71 (221)
T ss_dssp CCCS
T ss_pred CCcC
Confidence 8754
No 491
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.16 E-value=3.2 Score=37.93 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=59.9
Q ss_pred CeEEEEecCc--hHHHHHHHhcCCCcEEEEEECChHHH-HHHHhchh-c-ccCCCC-------CCCeEEEEcchHHHHhc
Q 025534 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVV-EFCKSYLV-V-NKEAFS-------DPRLELVINDARAELES 171 (251)
Q Consensus 104 ~~VL~iG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi-~~a~~~~~-~-~~~~~~-------~~rv~~~~~D~~~~l~~ 171 (251)
++|.+||+|. ++++..+++. + -+|+++|++++-. +..++.+. . ..+.+. ..++++. .|. +-
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G-~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl-~a--- 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-G-IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF-HK--- 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG-GG---
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH-HH---
Confidence 6899999996 3456666664 4 5899999999821 11111111 0 000000 1234432 332 11
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEecC
Q 025534 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (251)
Q Consensus 172 ~~~~fD~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~~~ 220 (251)
-...|+||...+.. + -...++|++ +.+.++|+.+++.|+.
T Consensus 128 -l~~aDlVIeAVpe~----~---~vk~~v~~~-l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 128 -LSNCDLIVESVIED----M---KLKKELFAN-LENICKSTCIFGTNTS 167 (460)
T ss_dssp -CTTCSEEEECCCSC----H---HHHHHHHHH-HHTTSCTTCEEEECCS
T ss_pred -HccCCEEEEcCCCC----H---HHHHHHHHH-HHhhCCCCCEEEecCC
Confidence 24689999987632 1 123577888 7899999999987764
No 492
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.05 E-value=3.8 Score=35.03 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=54.7
Q ss_pred CeEEEEecCchH--HHHHHHhcCCCcEEEEEECChHHHHHHHhc-hhcccCCCCCCCeEE----EEcchHHHHhcCCCce
Q 025534 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFSDPRLEL----VINDARAELESRKESY 176 (251)
Q Consensus 104 ~~VL~iG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~~~~rv~~----~~~D~~~~l~~~~~~f 176 (251)
.+|++||+|.-+ ++..|.+. + .+|+.++.++. +..++. +..+.. ..+..++ ...|.. ...+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-~~V~~~~r~~~--~~i~~~Gl~~~~~--~~g~~~~~~~~~~~~~~----~~~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-G-HCVSVVSRSDY--ETVKAKGIRIRSA--TLGDYTFRPAAVVRSAA----ELETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-T-CEEEEECSTTH--HHHHHHCEEEEET--TTCCEEECCSCEESCGG----GCSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-CeEEEEeCChH--HHHHhCCcEEeec--CCCcEEEeeeeeECCHH----HcCCCC
Confidence 589999998654 34455553 3 58999999872 444432 222110 0122332 123321 122479
Q ss_pred eEEEEcCCCCCCCCcccCCccHHHHHHHHcccCCCCcEEEEe
Q 025534 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (251)
Q Consensus 177 D~Ii~D~~~~~~~~p~~~l~~~ef~~~~~~~~L~pgG~l~~~ 218 (251)
|+|++-.+... ..+.++. ++..++++.+++.-
T Consensus 73 DlVilavK~~~---------~~~~l~~-l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 73 DCTLLCIKVVE---------GADRVGL-LRDAVAPDTGIVLI 104 (320)
T ss_dssp SEEEECCCCCT---------TCCHHHH-HTTSCCTTCEEEEE
T ss_pred CEEEEecCCCC---------hHHHHHH-HHhhcCCCCEEEEe
Confidence 99999865322 1246777 78899998866543
No 493
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=85.05 E-value=3 Score=34.31 Aligned_cols=76 Identities=13% Similarity=0.290 Sum_probs=48.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..++||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL-G-ASVYTCSRNQKELNDCLTQWRSK-----GFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 45789999987653 44555554 3 58999999987766544433211 24677888776542 211
Q ss_pred --CC-CceeEEEEcCC
Q 025534 172 --RK-ESYDVIIGDLA 184 (251)
Q Consensus 172 --~~-~~fD~Ii~D~~ 184 (251)
.- ++.|+++.++-
T Consensus 81 ~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHTTTCCCEEEECCC
T ss_pred HHHcCCCCCEEEECCC
Confidence 11 57999999875
No 494
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=85.03 E-value=5.8 Score=32.83 Aligned_cols=76 Identities=14% Similarity=0.285 Sum_probs=48.5
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh--
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~-- 170 (251)
..+.||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+... ..++.++..|..+. ++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL-G-ARVYTCSRNEKELDECLEIWREK-----GLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 46789999986553 34555554 3 58999999987666544433221 24678888776432 21
Q ss_pred -cCC-CceeEEEEcCC
Q 025534 171 -SRK-ESYDVIIGDLA 184 (251)
Q Consensus 171 -~~~-~~fD~Ii~D~~ 184 (251)
..- ++.|++|.++-
T Consensus 93 ~~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAG 108 (273)
T ss_dssp HHHTTSCCCEEEECCC
T ss_pred HHHcCCCCcEEEECCC
Confidence 111 57899999874
No 495
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.00 E-value=2.4 Score=35.43 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=51.3
Q ss_pred CCCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hh-
Q 025534 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~- 170 (251)
..++.||+.|+++|. +++.+++. + .+|..++.+++-.+...+.+... .+++.++..|..+. ++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVA-G-ARILINGTDPSRVAQTVQEFRNV-----GHDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-T-CEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHH
Confidence 457889999987664 45555554 3 58999999988777665544322 35677877776432 11
Q ss_pred --cCCCceeEEEEcCC
Q 025534 171 --SRKESYDVIIGDLA 184 (251)
Q Consensus 171 --~~~~~fD~Ii~D~~ 184 (251)
...++.|+++.++-
T Consensus 97 ~~~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAG 112 (271)
T ss_dssp HHHHTCCCCEEEECCC
T ss_pred HHHHCCCCCEEEECCC
Confidence 12357999999875
No 496
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.95 E-value=4.2 Score=33.72 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=48.8
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECC------------hHHHHHHHhchhcccCCCCCCCeEEEEcchH
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDID------------EEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid------------~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~ 166 (251)
+++.||+.|+++|. +++.+++. + .+|.+++.+ .+-++.+.+.+... ..++.++..|..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE-G-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-----GRKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-----TSCEEEEECCTT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CeEEEEcccccccccccchhhhHHHHHHHHHHHhc-----CCceEEEEccCC
Confidence 56789999987664 45555554 3 589999987 55555444433321 357888888865
Q ss_pred HH------Hhc---CCCceeEEEEcCC
Q 025534 167 AE------LES---RKESYDVIIGDLA 184 (251)
Q Consensus 167 ~~------l~~---~~~~fD~Ii~D~~ 184 (251)
+. +.+ .-++.|++|.++-
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 42 211 1247999999875
No 497
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.85 E-value=2.8 Score=35.01 Aligned_cols=77 Identities=12% Similarity=0.137 Sum_probs=51.3
Q ss_pred CCCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc
Q 025534 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (251)
Q Consensus 101 ~~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~ 171 (251)
..+++||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. +++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEA-G-AQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHH
Confidence 356889999987664 45555654 3 58999999987776655544322 24678888886432 221
Q ss_pred ---CCCceeEEEEcCC
Q 025534 172 ---RKESYDVIIGDLA 184 (251)
Q Consensus 172 ---~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 103 ~~~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAG 118 (276)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1247999999875
No 498
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.81 E-value=5.1 Score=32.65 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=48.7
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..+.+|+.|+++|. +++.+++. + .+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAE-G-AAVAIAARRVEKLRALGDELTAA-----GAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 45789999987653 44555554 3 58999999987766554443321 24678888886432 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-++.|++|.++-
T Consensus 79 ~~~~g~id~lv~nAg 93 (247)
T 2jah_A 79 VEALGGLDILVNNAG 93 (247)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247999999874
No 499
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.77 E-value=3.8 Score=33.19 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=47.0
Q ss_pred CCCeEEEEecCchH---HHHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHH------Hhc-
Q 025534 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (251)
Q Consensus 102 ~~~~VL~iG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~------l~~- 171 (251)
..++||+.|+++|. +++.+++. + .+|++++.++.-.+...+.+... .+++.++..|..+. ++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATA-G-ASVVVSDINADAANHVVDEIQQL-----GGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 45789998876443 33444443 3 58999999987665544433321 24678888886532 111
Q ss_pred --CCCceeEEEEcCC
Q 025534 172 --RKESYDVIIGDLA 184 (251)
Q Consensus 172 --~~~~fD~Ii~D~~ 184 (251)
.-.+.|+||.++.
T Consensus 83 ~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 83 ISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1137999999875
No 500
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.69 E-value=8.4 Score=32.81 Aligned_cols=106 Identities=14% Similarity=0.198 Sum_probs=52.6
Q ss_pred eEEEEecCchHH--HHHHHhcCCCcEEEEEECChHHHHHHHhchhcccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025534 105 TIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (251)
Q Consensus 105 ~VL~iG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~D 182 (251)
+|.+||+|.=+. +..++......+|+.+|++++.++.....+.... .+. ...++...|. +-+ ...|+|++-
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~-~~~~i~~~~~-~a~----~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PVS-HGTRVWHGGH-SEL----ADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CTT-SCCEEEEECG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hhc-CCeEEEECCH-HHh----CCCCEEEEc
Confidence 789999976443 3334443323489999999986653222111100 011 2344444452 212 468999998
Q ss_pred CCCCCCCCc-ccCCc--c----HHHHHHHHcccCCCCcEEEEec
Q 025534 183 LADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQA 219 (251)
Q Consensus 183 ~~~~~~~~p-~~~l~--~----~ef~~~~~~~~L~pgG~l~~~~ 219 (251)
...|...+. ...+. + ++.++. +.+. .|++++++-+
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~~~vi~~t 116 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQ-ITRA-APDAVLLVTS 116 (304)
T ss_dssp C------------CHHHHHHHHHHHHHH-HHHH-CSSSEEEECS
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHH-HHHh-CCCeEEEEec
Confidence 743321010 00111 1 455565 4554 7999887633
Done!