Query 025535
Match_columns 251
No_of_seqs 142 out of 754
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 12:19:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tgv_A Heme-binding protein HU 99.9 8.9E-22 3E-26 161.0 12.1 91 142-239 4-97 (148)
2 1xhn_A CREG, cellular represso 99.9 5.4E-21 1.9E-25 160.5 13.1 110 134-245 12-135 (184)
3 3dnh_A Uncharacterized protein 99.8 6.2E-21 2.1E-25 169.5 12.3 103 135-242 22-125 (258)
4 3gas_A Heme oxygenase; FMN-bin 99.8 1.7E-19 5.7E-24 161.9 12.8 91 139-236 85-179 (259)
5 3swj_A CHUZ, putative uncharac 99.8 7E-19 2.4E-23 156.5 12.8 93 137-236 83-179 (251)
6 1vl7_A Hypothetical protein AL 99.8 1.1E-18 3.8E-23 142.0 12.2 96 137-238 15-113 (157)
7 2arz_A Hypothetical protein PA 99.8 5.4E-19 1.8E-23 153.5 10.9 95 139-237 6-101 (247)
8 1rfe_A Hypothetical protein RV 99.6 4.5E-15 1.5E-19 119.2 12.6 98 133-238 3-100 (162)
9 3f7e_A Pyridoxamine 5'-phospha 99.5 2E-14 6.9E-19 112.7 8.4 86 141-236 4-89 (131)
10 2i02_A General stress protein 99.5 2.7E-14 9.1E-19 113.6 8.7 93 136-238 6-100 (148)
11 2iab_A Hypothetical protein; N 99.5 3.1E-14 1.1E-18 116.1 8.8 84 141-237 13-97 (155)
12 3ec6_A General stress protein 99.5 1.1E-13 3.9E-18 109.6 10.6 88 141-237 4-91 (139)
13 2asf_A Hypothetical protein RV 99.5 7.4E-14 2.5E-18 110.5 9.4 88 138-237 7-95 (137)
14 3db0_A LIN2891 protein; putati 99.5 1E-13 3.6E-18 107.7 9.8 87 141-238 6-92 (128)
15 2fhq_A Putative general stress 99.5 1.5E-13 5E-18 107.7 10.3 89 138-238 6-95 (141)
16 2re7_A Uncharacterized protein 99.5 1.9E-13 6.5E-18 106.8 10.9 90 139-238 5-96 (134)
17 3u5w_A Putative uncharacterize 99.5 2.4E-13 8.3E-18 110.7 10.8 94 135-238 5-98 (148)
18 2aq6_A Pyridoxine 5'-phosphate 99.5 7.8E-13 2.7E-17 104.3 12.4 88 139-236 4-92 (147)
19 2hq7_A Protein, related to gen 99.4 5.5E-13 1.9E-17 105.0 10.0 88 141-238 7-95 (146)
20 2hti_A BH0577 protein; structu 99.4 7.3E-13 2.5E-17 110.5 10.8 98 132-237 4-111 (185)
21 2hq9_A MLL6688 protein; struct 99.4 1.2E-12 3.9E-17 104.9 11.1 90 139-238 6-95 (149)
22 2hhz_A Pyridoxamine 5'-phospha 99.4 1.6E-12 5.4E-17 104.2 10.8 88 142-237 4-91 (150)
23 2fg9_A 5-nitroimidazole antibi 99.4 3.7E-13 1.3E-17 112.3 7.2 100 132-238 17-128 (178)
24 3cp3_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 105.0 9.5 98 132-239 7-107 (148)
25 3fkh_A Putative pyridoxamine 5 99.4 1.5E-12 5.1E-17 106.5 9.2 96 133-239 2-97 (138)
26 2htd_A Predicted flavin-nucleo 99.4 5E-12 1.7E-16 101.9 11.1 88 138-237 25-114 (140)
27 2q9k_A Uncharacterized protein 99.4 1.9E-12 6.5E-17 106.7 8.8 84 141-237 10-96 (151)
28 2ig6_A NIMC/NIMA family protei 99.3 4.9E-12 1.7E-16 103.2 9.8 87 140-238 18-104 (150)
29 3dmb_A Putative general stress 99.3 1.6E-11 5.4E-16 99.5 10.7 86 141-237 8-95 (147)
30 2fur_A Hypothetical protein; s 99.3 1E-11 3.6E-16 106.2 9.3 99 131-237 10-118 (209)
31 2vpa_A NIMA-related protein; c 99.2 1.6E-11 5.5E-16 106.4 9.0 100 132-236 36-146 (216)
32 2qea_A Putative general stress 99.2 8.3E-11 2.8E-15 96.3 9.9 84 142-238 6-92 (160)
33 3u35_A General stress protein; 99.2 6.1E-11 2.1E-15 100.8 8.9 88 139-237 25-114 (182)
34 1dnl_A Pyridoxine 5'-phosphate 98.9 3.8E-09 1.3E-13 90.5 8.0 79 148-237 27-106 (199)
35 3ba3_A Protein LP_0091, pyrido 98.9 1.5E-08 5.3E-13 83.9 11.2 92 142-241 4-98 (145)
36 2ol5_A PAI 2 protein; structur 98.8 1.2E-08 4E-13 87.6 9.4 92 139-238 9-114 (202)
37 1ty9_A Phenazine biosynthesis 98.8 3.9E-08 1.3E-12 86.1 10.3 78 148-236 52-130 (222)
38 1nrg_A Pyridoxine 5'-phosphate 98.7 3.1E-08 1.1E-12 89.2 8.1 78 149-237 75-153 (261)
39 1ci0_A Protein (PNP oxidase); 98.7 4.2E-08 1.4E-12 86.5 8.3 77 149-236 52-131 (228)
40 2i51_A Uncharacterized conserv 98.6 1.1E-07 3.7E-12 81.0 9.2 76 153-238 25-102 (195)
41 2ou5_A Pyridoxamine 5'-phospha 98.6 1.2E-07 4.2E-12 79.6 8.1 79 152-241 29-109 (175)
42 2a2j_A Pyridoxamine 5'-phospha 98.5 3.3E-07 1.1E-11 82.0 8.7 77 149-237 77-154 (246)
43 3in6_A FMN-binding protein; st 98.1 1.9E-05 6.4E-10 66.3 9.9 66 142-214 19-87 (148)
44 3a6r_A FMN-binding protein; el 97.9 5.1E-05 1.7E-09 61.5 9.7 88 142-237 3-96 (122)
45 3r5l_A Deazaflavin-dependent n 97.8 9.7E-05 3.3E-09 59.7 9.2 73 151-239 14-91 (122)
46 3h96_A F420-H2 dependent reduc 96.6 0.0043 1.5E-07 51.3 6.8 74 151-239 29-109 (143)
47 3r5y_A Putative uncharacterize 96.6 0.0044 1.5E-07 51.6 6.8 71 153-239 40-115 (147)
48 3r5z_A Putative uncharacterize 96.3 0.0077 2.6E-07 50.0 6.6 71 153-239 38-113 (145)
49 3e4v_A NADH:FMN oxidoreductase 54.1 15 0.0005 30.2 4.5 68 141-215 7-78 (186)
50 2ptf_A Uncharacterized protein 52.6 26 0.00088 30.4 6.1 54 154-214 37-91 (233)
51 1eje_A FMN-binding protein; st 40.6 7.6 0.00026 32.0 0.7 68 141-215 16-87 (192)
52 3fge_A Putative flavin reducta 39.4 33 0.0011 28.4 4.5 67 140-215 12-91 (203)
53 2iml_A Hypothetical protein; F 36.7 82 0.0028 26.5 6.6 55 154-214 16-71 (199)
54 2r0x_A Possible flavin reducta 30.5 95 0.0032 24.4 5.7 70 142-215 5-76 (158)
55 3b5m_A Uncharacterized protein 29.8 56 0.0019 27.5 4.4 54 155-214 7-66 (205)
56 4hx6_A Oxidoreductase; structu 27.4 54 0.0018 26.9 3.8 74 139-215 17-90 (185)
57 3hmz_A Flavin reductase domain 26.1 28 0.00096 28.9 1.8 69 139-215 16-88 (199)
58 2ecu_A Flavin reductase (HPAC) 25.6 91 0.0031 24.4 4.7 65 143-215 3-73 (149)
59 2d9r_A Conserved hypothetical 25.5 2E+02 0.0069 22.0 6.6 59 144-212 44-102 (104)
60 2nr4_A Conserved hypothetical 24.6 1.2E+02 0.0042 25.5 5.7 54 153-214 30-83 (213)
61 1yoa_A Putative flavoprotein; 24.4 2E+02 0.007 22.3 6.6 65 143-215 4-74 (159)
62 3rh7_A Hypothetical oxidoreduc 22.9 1.9E+02 0.0063 26.0 6.8 70 139-215 15-90 (321)
63 3pft_A Flavin reductase; desul 21.0 1.6E+02 0.0055 23.2 5.4 66 142-215 4-75 (157)
64 3cb0_A 4-hydroxyphenylacetate 20.2 2E+02 0.0067 22.9 5.8 72 140-215 14-87 (173)
No 1
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.87 E-value=8.9e-22 Score=160.96 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=82.7
Q ss_pred HHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCC---CC
Q 025535 142 ALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW---SG 218 (251)
Q Consensus 142 ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~---dp 218 (251)
.+++++||+++++++|||++ .||+|++|+|||+.|+ |.+||++|.+++|++||++||||||+|.+++. ++
T Consensus 4 ~~ei~~fl~~~~~~~LaT~~------~~G~P~~s~v~~~~~~-~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~ 76 (148)
T 3tgv_A 4 EPEIKEFRQERKTLQLATVD------AQGRPNVSYAPFVQNQ-EGYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQL 76 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEEC------TTCCEEEEEEEEEEET-TEEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCG
T ss_pred hHHHHHHHhhCCEEEEEEEC------CCCCEEEEEEEEEEEC-CEEEEEECCccHHHHHHHhCCCeEEEEecCcccccCc
Confidence 46899999999999999998 5999999999999984 67999999999999999999999999998863 57
Q ss_pred ccccEEEEEEEEEeCCCchHH
Q 025535 219 LSNARVTIFGDIFPLPEHQQV 239 (251)
Q Consensus 219 ~a~aRVTL~G~a~~Vedeeee 239 (251)
++.+|||+.|+++.+++++++
T Consensus 77 ~~~~rltl~G~a~~v~~~~~~ 97 (148)
T 3tgv_A 77 FARKRLTFDAVASMVERDSEL 97 (148)
T ss_dssp GGCCEEEEEEEEEEECTTSHH
T ss_pred ccceEEEEeeeEEEcCCCcHH
Confidence 788999999999999887654
No 2
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.85 E-value=5.4e-21 Score=160.53 Aligned_cols=110 Identities=21% Similarity=0.321 Sum_probs=92.2
Q ss_pred ccCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEE----CCCCCeEEEecCCchhhhhhhcCCceEE
Q 025535 134 SAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAP----DSMGHPIFSFSPLAIHTRNLLADPRCTL 209 (251)
Q Consensus 134 ~~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~----D~dG~pif~vS~lA~HTrNL~aDPRVSL 209 (251)
+..+++..++.+|+||+++++|+|||++++. +.+|+||+|+|+|+. |++|.+||+++.++.|++||++||||||
T Consensus 12 ~~~~~~~~~~~ar~ll~~~~~g~LaTi~~~~--~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl 89 (184)
T 1xhn_A 12 SLPPREDAARVARFVTHVSDWGALATISTLE--AVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATL 89 (184)
T ss_dssp CCCCTTCHHHHHHHHHHHCSEEEEEEECCCG--GGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEE
T ss_pred CCCCChHHHHHHHHHHHhCCEEEEEecccCC--CCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEE
Confidence 3456789999999999999999999998311 128999999999998 7679999999999999999999999999
Q ss_pred EEEcCC--------CCCcc--ccEEEEEEEEEeCCCchHHHHHHhc
Q 025535 210 VVQIPG--------WSGLS--NARVTIFGDIFPLPEHQQVVIYFFL 245 (251)
Q Consensus 210 tV~e~e--------~dp~a--~aRVTL~G~a~~Vedeeee~ar~~y 245 (251)
+|.+++ +++.. ++||||+|+++.|++++.+.++-.|
T Consensus 90 ~v~~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d~e~~~~~~~~ 135 (184)
T 1xhn_A 90 TMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSL 135 (184)
T ss_dssp EEEGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCGGGHHHHHHHH
T ss_pred EEecCCCccccccCCCCccccCceEEEEEEEEECChHHHHHHHHHH
Confidence 999875 35444 7899999999999876555554443
No 3
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=99.84 E-value=6.2e-21 Score=169.45 Aligned_cols=103 Identities=22% Similarity=0.352 Sum_probs=89.9
Q ss_pred cCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 135 AHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 135 ~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
+......++.+|+||+++++|+|||+++ .+|+||+|+|+|+.|++|.+||++|.++.|++||++||||||+|.++
T Consensus 22 ~p~~~~~~~~ar~lL~~~~~g~LaTv~~-----~dG~P~~s~v~y~~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V~~~ 96 (258)
T 3dnh_A 22 AGAPFEAVRVARDVLHTSRTAALATLDP-----VSGYPYTTATNIGIEPDGTPFFFAAGLTLHARNMETDARISVTLAPF 96 (258)
T ss_dssp ----CCHHHHHHHHHHHCCEEEEEEECT-----TTCCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCEEEEEeccC-----CCCceEEEEEEEEECCCCCEEEEEeCCcHHHHHHhhCCCEEEEEecC
Confidence 3344677899999999999999999972 49999999999999988999999999999999999999999999988
Q ss_pred CC-CCccccEEEEEEEEEeCCCchHHHHH
Q 025535 215 GW-SGLSNARVTIFGDIFPLPEHQQVVIY 242 (251)
Q Consensus 215 e~-dp~a~aRVTL~G~a~~Vedeeee~ar 242 (251)
+. ++++++||||+|+++.|++++.+.++
T Consensus 97 ~~~d~~~~~rvtl~G~a~~v~~~e~~~l~ 125 (258)
T 3dnh_A 97 GKGDALTLPRLTLVGRADRIGPDEVPLAI 125 (258)
T ss_dssp GGSCGGGSCEEEEEEEEEECCGGGHHHHH
T ss_pred CCCChhhCCeEEEEEEEEEcCchHHHHHH
Confidence 74 67888999999999999888644443
No 4
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.81 E-value=1.7e-19 Score=161.93 Aligned_cols=91 Identities=15% Similarity=0.081 Sum_probs=83.4
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCC-ceEEEEEcCCC-
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADP-RCTLVVQIPGW- 216 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDP-RVSLtV~e~e~- 216 (251)
....+++++|++++++++|||++ .+|+|++|+|+|+.++ |.+||++|.++.|++||++|| ||||+|.+++.
T Consensus 85 ~~l~~ei~~ll~~~~~~~LAT~~------~~G~P~~S~v~f~~~~-g~~~iliS~lA~Ht~NL~~np~rvSllviede~~ 157 (259)
T 3gas_A 85 KGVEEEVKAFKEGFDSVCLATLH------PNGHVVCSYAPLMSDG-KQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESK 157 (259)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEEC------TTSCEEEEEEEEEEET-TEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTT
T ss_pred hhHHHHHHHHHHhCCEEEEEeeC------cCCCEEEEEEEEEEEC-CEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccc
Confidence 34557899999999999999998 4899999999999984 789999999999999999999 99999999873
Q ss_pred --CCccccEEEEEEEEEeCCCc
Q 025535 217 --SGLSNARVTIFGDIFPLPEH 236 (251)
Q Consensus 217 --dp~a~aRVTL~G~a~~Vede 236 (251)
++++.+|||+.|+++.|+++
T Consensus 158 ~~~~~a~~Rlt~~g~A~~v~~~ 179 (259)
T 3gas_A 158 AKSAILRKRLRYKTNTRFIERG 179 (259)
T ss_dssp SSBTTBCCEEEEEEEEEEECSS
T ss_pred cCChhhcCeEEEEEEEEECCCc
Confidence 58899999999999999986
No 5
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.79 E-value=7e-19 Score=156.48 Aligned_cols=93 Identities=14% Similarity=0.067 Sum_probs=86.3
Q ss_pred CCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCC-ceEEEEEcCC
Q 025535 137 GLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADP-RCTLVVQIPG 215 (251)
Q Consensus 137 ~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDP-RVSLtV~e~e 215 (251)
+.+...+++++||+++++++|||++ .+|+|++|+|+|+.+ +|.+||++|.++.|++||++|| ||||+|.+++
T Consensus 83 d~~~l~~e~~~ll~~~~~~~LAT~~------~dG~P~~s~v~~~~~-~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e 155 (251)
T 3swj_A 83 NFSGVEKELNEFMLSFNSVALATLN------ANGEVVCSYAPFVST-QWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDE 155 (251)
T ss_dssp CCSHHHHHHHHHHHTCSEEEEEEEC------TTSCEEEEEEEEEEE-TTEEEEEEETTSHHHHHHHHSTTCEEEEEECCT
T ss_pred ChhhHHHHHHHHHhhCCEEEEEEEC------CCCCEEEEEEEEEEE-CCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCc
Confidence 5577889999999999999999998 499999999999998 6889999999999999999999 9999999887
Q ss_pred C---CCccccEEEEEEEEEeCCCc
Q 025535 216 W---SGLSNARVTIFGDIFPLPEH 236 (251)
Q Consensus 216 ~---dp~a~aRVTL~G~a~~Vede 236 (251)
. ++++..|||+.|+|+.|+++
T Consensus 156 ~~~~~~~~~~rltl~G~a~~v~~~ 179 (251)
T 3swj_A 156 SKAASVILRKRLRYRVNASFLERG 179 (251)
T ss_dssp TTSSCTTCCCEEEEEEEEEECCSS
T ss_pred ccccCccccceEEEEEEEEEecCh
Confidence 3 67888999999999999886
No 6
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.78 E-value=1.1e-18 Score=142.05 Aligned_cols=96 Identities=20% Similarity=0.247 Sum_probs=81.0
Q ss_pred CCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC-
Q 025535 137 GLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG- 215 (251)
Q Consensus 137 ~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e- 215 (251)
+++...+.+++||+.+++++|||++ .||.|++++|+|+.+++|.+||+++..+.|++||++||+|||+|.+++
T Consensus 15 ~~~~~~~~~~~ll~~~~~~~LaTv~------~dG~P~~~~v~~~~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~ 88 (157)
T 1vl7_A 15 QLEKAQAEYAGFIQEFQSAIISTIS------EQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEA 88 (157)
T ss_dssp --------CHHHHTTCSEEEEEEEC------TTSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGG
T ss_pred hHHhHHHHHHHHHHhCCEEEEEEEC------CCCCEEEEEEEEEEcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCcc
Confidence 4577788999999999999999998 489999999999999778999999999999999999999999999876
Q ss_pred --CCCccccEEEEEEEEEeCCCchH
Q 025535 216 --WSGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 216 --~dp~a~aRVTL~G~a~~Vedeee 238 (251)
.++++..+|+|.|+|+.++++++
T Consensus 89 ~~~~~~~~~~v~i~G~a~~v~~~~~ 113 (157)
T 1vl7_A 89 KTNQIFARRRLSFDCTATLIERESQ 113 (157)
T ss_dssp GCSSGGGCCEEEEEEEEEEECTTSH
T ss_pred ccCCcccCceEEEEEEEEEcCCCcH
Confidence 35677789999999999988743
No 7
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.78 E-value=5.4e-19 Score=153.46 Aligned_cols=95 Identities=34% Similarity=0.523 Sum_probs=85.3
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCC-C
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW-S 217 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~-d 217 (251)
+..++.+|+||+.+++|+|||+++. .||+|++++|+|+.+++|.+||+++..+.|++||++||||||+|.+++. +
T Consensus 6 ~~~~~~~r~ll~~~~~~~LaT~~~~----~dG~P~~s~v~~~~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~~ 81 (247)
T 2arz_A 6 VEAAKNARELLLKEYRAVLSTHSKK----WPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAED 81 (247)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECSS----STTCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSS
T ss_pred hHHHHHHHHHHHhCCEEEEEEcCCC----CCCcceEEEEEEEECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecCCCCC
Confidence 4567889999999999999999821 1899999999999998899999999999999999999999999988763 6
Q ss_pred CccccEEEEEEEEEeCCCch
Q 025535 218 GLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 218 p~a~aRVTL~G~a~~Vedee 237 (251)
++++.+|+|.|+++.+++++
T Consensus 82 ~~~~~~v~l~G~a~~v~d~e 101 (247)
T 2arz_A 82 IQAVGRLTLLAEARQLAEEE 101 (247)
T ss_dssp TTSSCEEEEEEEEEECCHHH
T ss_pred hhhCceEEEEEEEEECCcHH
Confidence 78889999999999998644
No 8
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.62 E-value=4.5e-15 Score=119.21 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=86.2
Q ss_pred cccCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEE
Q 025535 133 TSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQ 212 (251)
Q Consensus 133 ~~~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~ 212 (251)
|+|++++...+++++||+.+.+++|||++ .+|.|++++|+|+.+ +|.+||+++..+.|.+||++||+|+|+|.
T Consensus 3 ~rr~~~~~~~~~~~~~l~~~~~~~LaT~~------~~G~P~~~pv~~~~~-~~~l~~~t~~~~~k~~~l~~np~v~l~~~ 75 (162)
T 1rfe_A 3 KQRADIVMSEAEIADFVNSSRTGTLATIG------PDGQPHLTAMWYAVI-DGEIWLETKAKSQKAVNLRRDPRVSFLLE 75 (162)
T ss_dssp CCCTTTCCCHHHHHHHHHHCCCEEEEEEC------TTSCEEEEEECCEEE-TTEEEEEEETTSHHHHHHHHCCEEEEEEE
T ss_pred ccccccCCCHHHHHHHHhcCcEEEEEEEC------CCCCEEEEEEEEEEE-CCEEEEEecCccHHHHHHhhCCeEEEEEE
Confidence 78889899999999999999999999997 489999999999987 57899999999999999999999999998
Q ss_pred cCCCCCccccEEEEEEEEEeCCCchH
Q 025535 213 IPGWSGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 213 e~e~dp~a~aRVTL~G~a~~Vedeee 238 (251)
+.+ ......+|++.|+++.++++++
T Consensus 76 ~~~-~~~~~~~v~~~G~a~~v~d~~~ 100 (162)
T 1rfe_A 76 DGD-TYDTLRGVSFEGVAEIVEEPEA 100 (162)
T ss_dssp ECS-SGGGCEEEEEEEEEEEECCHHH
T ss_pred cCC-CcccccEEEEEEEEEEeCChHH
Confidence 765 2223358999999999987643
No 9
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.53 E-value=2e-14 Score=112.68 Aligned_cols=86 Identities=22% Similarity=0.243 Sum_probs=75.5
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCcc
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLS 220 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a 220 (251)
..++++++|+.+++++|||++ .+|.|++++|+|+.| +|.+||..+..+.|.+||++||+|+|+|.+.+ +++
T Consensus 4 l~~~~~~~l~~~~~~~LaT~~------~dG~P~~~pv~~~~d-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~-~~~- 74 (131)
T 3f7e_A 4 VPEGYESLLERPLYGHLATVR------PDGTPQVNAMWFAWD-GEVLRFTHTTKRQKYRNIKANPAVAMSVIDPD-NPY- 74 (131)
T ss_dssp CCTTCHHHHHSCCCEEEEEEC------TTSCEEEEEECCEEC-SSCEEEEEETTSHHHHHHHHCCEEEEEEECSS-CTT-
T ss_pred ChHHHHHHHhCCCcEEEEEEC------CCCCEEEEEEEEEEE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCC-CCe-
Confidence 345688999999999999997 489999999999997 57899999999999999999999999999876 323
Q ss_pred ccEEEEEEEEEeCCCc
Q 025535 221 NARVTIFGDIFPLPEH 236 (251)
Q Consensus 221 ~aRVTL~G~a~~Vede 236 (251)
.+|++.|+++.|+++
T Consensus 75 -~~v~v~G~a~~v~~~ 89 (131)
T 3f7e_A 75 -RYLEVRGLVEDIVPD 89 (131)
T ss_dssp -CEEEEEEEEEEEEEC
T ss_pred -eEEEEEEEEEEeccC
Confidence 599999999988764
No 10
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.52 E-value=2.7e-14 Score=113.63 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=78.5
Q ss_pred CCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEee--EECCCCCeEEEecCCchhhhhhhcCCceEEEEEc
Q 025535 136 HGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDF--APDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQI 213 (251)
Q Consensus 136 ~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~F--a~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e 213 (251)
++++...+.++++|+.+++++|||++ .+|.|++++|+| ..+++|.+||+++..+.|++||++||+|+|++..
T Consensus 6 ~d~~~~~~~~~~~l~~~~~~~LaT~~------~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~ 79 (148)
T 2i02_A 6 TDRTQEIQKLHELIKNIDYGMFTTVD------DDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSS 79 (148)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEC------TTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEE
T ss_pred cchHHHHHHHHHHHhcCCEEEEEEEc------CCCCEEEEEeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEc
Confidence 34556678899999999999999998 489999999999 4454678999999999999999999999999988
Q ss_pred CCCCCccccEEEEEEEEEeCCCchH
Q 025535 214 PGWSGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 214 ~e~dp~a~aRVTL~G~a~~Vedeee 238 (251)
++. ...|++.|+|+.+++++.
T Consensus 80 ~~~----~~~v~v~G~a~~v~d~~~ 100 (148)
T 2i02_A 80 PEQ----QRYVSISGTSQLVKDRNK 100 (148)
T ss_dssp TTT----TEEEEEEEEEEEECCHHH
T ss_pred CCC----CeEEEEEEEEEEEcCHHH
Confidence 762 347999999999987644
No 11
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.52 E-value=3.1e-14 Score=116.13 Aligned_cols=84 Identities=19% Similarity=0.128 Sum_probs=75.2
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCC-CcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCc
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRRE-GYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGL 219 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~D-G~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~ 219 (251)
..+.+++||+.+++++|||++ .| |.|++++|+|+.+ +|.+||+++..+.|.+||++||+|+|+|.+..
T Consensus 13 ~~~~~~~~L~~~~~~~LaT~~------~d~G~P~~~pv~~~~d-~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~~---- 81 (155)
T 2iab_A 13 RIQDTLNRLELDVDAWVSTAG------ADGGAPYLVPLSYLWD-GETFLVATPAASPTGRNLSETGRVRLGIGPTR---- 81 (155)
T ss_dssp HHHHHHHHHHHCCEEEEEEEC------TTSSCEEEEEEECEEC-SSCEEEEEETTSHHHHHHHHHCEEEEEESSTT----
T ss_pred hHHHHHHHHhCCCeEEEEEec------CCCCCceEEEEEEEEE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCC----
Confidence 346799999999999999998 47 9999999999987 67899999999999999999999999997663
Q ss_pred cccEEEEEEEEEeCCCch
Q 025535 220 SNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 220 a~aRVTL~G~a~~Vedee 237 (251)
..|++.|+|+.+++++
T Consensus 82 --~~v~v~G~a~~v~d~~ 97 (155)
T 2iab_A 82 --DLVLVEGTALPLEPAG 97 (155)
T ss_dssp --CEEEEEEEEEEECGGG
T ss_pred --CEEEEEEEEEEecCch
Confidence 4789999999998653
No 12
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.50 E-value=1.1e-13 Score=109.61 Aligned_cols=88 Identities=11% Similarity=0.115 Sum_probs=74.7
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCcc
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLS 220 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a 220 (251)
..+.+++||+.+++++|||++ +|.|++++|+|..+ ++.+||+++..+.|.+||++||+|+|+|...+ ++..
T Consensus 4 l~~~~~~~L~~~~~~~LaT~~-------dg~P~~~pv~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~-d~~~ 74 (139)
T 3ec6_A 4 LKEKITTIIQGQRTGVLSTVR-------NDKPHSAFMMFFHE-DFVLYVATDRQSKKITDIENNPNVHVLLGREG-KKLD 74 (139)
T ss_dssp HHHHHHHHHHSCCEEEEEEEE-------TTEEEEEEEECEEE-TTEEEEEEETTCHHHHHHHHCCEEEEEECC----CTT
T ss_pred HHHHHHHHHhcCCEEEEEEec-------CCCEEEEEEEEEEe-CCEEEEEECCCCHHHHHHHhCCcEEEEEEecC-CCCC
Confidence 457799999999999999997 89999999999985 67899999999999999999999999985432 2233
Q ss_pred ccEEEEEEEEEeCCCch
Q 025535 221 NARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 221 ~aRVTL~G~a~~Vedee 237 (251)
...|+|.|+|+.+++.+
T Consensus 75 ~~~v~v~G~a~~~~d~~ 91 (139)
T 3ec6_A 75 EDYIEVEGLASIEEDST 91 (139)
T ss_dssp CCEEEEEEEEEEECCHH
T ss_pred ccEEEEEEEEEEEcCHH
Confidence 45899999999998654
No 13
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.50 E-value=7.4e-14 Score=110.47 Aligned_cols=88 Identities=13% Similarity=0.002 Sum_probs=75.5
Q ss_pred CCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCC-CCeEEEecCCchhhhhhhcCCceEEEEEcCCC
Q 025535 138 LPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSM-GHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW 216 (251)
Q Consensus 138 ~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~d-G~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~ 216 (251)
.....++++++|+.+++++|||++ .+|.|++++|+|+.+++ |.+||+++..+.|++||++||+|+|+|.+..
T Consensus 7 ~~~~~~~~~~~L~~~~~~~LaT~~------~dG~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~- 79 (137)
T 2asf_A 7 TTRLSDDALAFLSERHLAMLTTLR------ADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGA- 79 (137)
T ss_dssp ----CHHHHHHTTSSCCEEEEEEC------TTSCEEEEEECCEEETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEETT-
T ss_pred cccCcHHHHHHHhCCCeEEEEEEC------CCCCEEEEEEEEEEECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECCC-
Confidence 345567899999999999999997 48999999999999864 7899999999999999999999999987643
Q ss_pred CCccccEEEEEEEEEeCCCch
Q 025535 217 SGLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 217 dp~a~aRVTL~G~a~~Vedee 237 (251)
.++++.|+++.+++++
T Consensus 80 -----~~v~v~G~a~~~~d~~ 95 (137)
T 2asf_A 80 -----RWLSLEGRAAVNSDID 95 (137)
T ss_dssp -----EEEEEEEEEEEECCHH
T ss_pred -----CEEEEEEEEEEecCHH
Confidence 5899999999998654
No 14
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.49 E-value=1e-13 Score=107.72 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=71.8
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCcc
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLS 220 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a 220 (251)
..++++++|+.+++++|||++ +|.|++++|+|+.+ +|.+||+++..+.|.+||++||+|+|+|..+. ..
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~-------~g~P~~~pv~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~---~~ 74 (128)
T 3db0_A 6 LEDKILAILEQHQVGVLTSVQ-------GDFPHARYMTFLHD-GLTLYTPSGKELPKTEEVRRNPHVCVLIGYDS---PG 74 (128)
T ss_dssp HHHHHHHHHHTCCEEEEEEEE-------TTEEEEEEEECEEE-TTEEEEEC----CTTCCCCCCCEEEEEECCCS---TT
T ss_pred HHHHHHHHHhhCCEEEEEEec-------CCCEEEEEEEEEec-CCEEEEEECCCCHHHHHHHhCCceEEEEEEcC---CC
Confidence 567899999999999999997 79999999999985 67899999999999999999999999986532 23
Q ss_pred ccEEEEEEEEEeCCCchH
Q 025535 221 NARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 221 ~aRVTL~G~a~~Vedeee 238 (251)
...+++.|+|+.++++++
T Consensus 75 ~~~v~v~G~a~~v~d~~~ 92 (128)
T 3db0_A 75 SAFLEINGLASLEEDESI 92 (128)
T ss_dssp CCEEEEEEEEEECCCHHH
T ss_pred CcEEEEEEEEEEEcCHHH
Confidence 358999999999977543
No 15
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.49 E-value=1.5e-13 Score=107.75 Aligned_cols=89 Identities=18% Similarity=0.298 Sum_probs=78.3
Q ss_pred CCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECC-CCCeEEEecCCchhhhhhhcCCceEEEEEcCCC
Q 025535 138 LPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDS-MGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW 216 (251)
Q Consensus 138 ~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~-dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~ 216 (251)
+....+.++++|+.+++++|||++ .+|.|++++|+|+.++ ++.+||+++..+.|.+||++||+|+|+|...+
T Consensus 6 ~~~~~~~~~~~l~~~~~~~LaT~~------~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~- 78 (141)
T 2fhq_A 6 TKTMKEKAVELLQKCEVVTLASVN------KEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG- 78 (141)
T ss_dssp CCCHHHHHHHHHHTCSEEEEEEEC------TTSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT-
T ss_pred hhHHHHHHHHHHhcCCEEEEEEEC------CCCCEEEEeeEEEEeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC-
Confidence 345678899999999999999998 4899999999999743 47899999999999999999999999999876
Q ss_pred CCccccEEEEEEEEEeCCCchH
Q 025535 217 SGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 217 dp~a~aRVTL~G~a~~Vedeee 238 (251)
..|++.|+++.++++++
T Consensus 79 -----~~v~v~G~a~~v~d~~~ 95 (141)
T 2fhq_A 79 -----DSVALMGEVEVVTDEKL 95 (141)
T ss_dssp -----EEEEEEEEEEEECCHHH
T ss_pred -----CEEEEEEEEEEECCHHH
Confidence 38999999999987643
No 16
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.49 E-value=1.9e-13 Score=106.78 Aligned_cols=90 Identities=13% Similarity=0.091 Sum_probs=77.7
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEEC-C-CCCeEEEecCCchhhhhhhcCCceEEEEEcCCC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPD-S-MGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW 216 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D-~-dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~ 216 (251)
....+.++++|+.+++++|||++ .+|.|++.+|+|... + +|.+||+++..+.|.+||++||+|+|++..+..
T Consensus 5 ~~~~~~~~~~l~~~~~~~LaT~~------~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~ 78 (134)
T 2re7_A 5 QKHIDKIQAVIKDVKFAMISTSN------KKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDE 78 (134)
T ss_dssp CCCHHHHHHHHHHCSCEEEEEEC------TTSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhcCCEEEEEEEc------CCCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCC
Confidence 34678999999999999999998 489999999999753 2 678999999999999999999999999987651
Q ss_pred CCccccEEEEEEEEEeCCCchH
Q 025535 217 SGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 217 dp~a~aRVTL~G~a~~Vedeee 238 (251)
...++|.|+|+.+++.+.
T Consensus 79 ----~~~v~v~G~a~~~~d~~~ 96 (134)
T 2re7_A 79 ----KNYVSISGDAELPTDKAK 96 (134)
T ss_dssp ----SCEEEEEEEEECCCCHHH
T ss_pred ----CeEEEEEEEEEEECCHHH
Confidence 247999999999987643
No 17
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.47 E-value=2.4e-13 Score=110.69 Aligned_cols=94 Identities=10% Similarity=0.037 Sum_probs=78.5
Q ss_pred cCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 135 AHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 135 ~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
...++...+++++||+.+.+|+|||+. ||.|++++|+|+.+ +|.+||... ...|.+||++||+|+|+|.+.
T Consensus 5 ~~~~~l~~~e~~~lL~~~~~~~Lat~~-------dg~P~~~Pv~~~~~-~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~ 75 (148)
T 3u5w_A 5 MLITEMSDYDIREMIQHKHVGRLGYVV-------DDRPIIVPMTFRFS-GGSFYSFTT-DGQKTNAMRKNDAICILFDQI 75 (148)
T ss_dssp -CEEECCHHHHHHHHHHCCEEEEEEEE-------TTEEEEEEEECEEE-TTEEEEEEC-CHHHHHHHHHCCEEEEEEEEE
T ss_pred cccccCCHHHHHHHHhcCCEEEEEEcc-------CCcEEEEEEEEEEE-CCEEEEEEC-CchhHHHHhcCCcEEEEEEec
Confidence 345577889999999999999999996 89999999999998 467777775 578999999999999999987
Q ss_pred CCCCccccEEEEEEEEEeCCCchH
Q 025535 215 GWSGLSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 215 e~dp~a~aRVTL~G~a~~Vedeee 238 (251)
+. ...-..|++.|+++.|+++++
T Consensus 76 ~~-~~~y~sV~v~G~a~~v~d~~e 98 (148)
T 3u5w_A 76 ES-QTKWRTVLVQGRYREIAREDE 98 (148)
T ss_dssp SS-SSSEEEEEEEEEEEECCGGGH
T ss_pred CC-CCcEEEEEEEEEEEEeCCHHH
Confidence 63 222346999999999988644
No 18
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.46 E-value=7.8e-13 Score=104.29 Aligned_cols=88 Identities=22% Similarity=0.208 Sum_probs=75.6
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCC-CeEEEecCCchhhhhhhcCCceEEEEEcCCCC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMG-HPIFSFSPLAIHTRNLLADPRCTLVVQIPGWS 217 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG-~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~d 217 (251)
+...++++++|+.+++++|||++ .+|.|++++|+|.+++++ .+||..+..+.|.+||++||+|+|+|..++
T Consensus 4 ~~~~~~~~~~l~~~~~~~LaT~~------~~G~P~~~pv~~~~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~-- 75 (147)
T 2aq6_A 4 QVFDDKLLAVISGNSIGVLATIK------HDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADD-- 75 (147)
T ss_dssp -CHHHHHHHHHHTCSEEEEEEEC------TTSCEEEEEEECEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTT--
T ss_pred ccChHHHHHHHhcCCeEEEEEEC------CCCCEEEEEEEEEEcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCC--
Confidence 45668899999999999999997 489999999999998553 677777778999999999999999998865
Q ss_pred CccccEEEEEEEEEeCCCc
Q 025535 218 GLSNARVTIFGDIFPLPEH 236 (251)
Q Consensus 218 p~a~aRVTL~G~a~~Vede 236 (251)
++ .+|++.|+++.++++
T Consensus 76 ~~--~~v~v~G~a~~~~d~ 92 (147)
T 2aq6_A 76 GW--SYAVAEGTAQLTPPA 92 (147)
T ss_dssp SS--CEEEEEEECEECCCC
T ss_pred Cc--EEEEEEEEEEEcCCC
Confidence 22 479999999999885
No 19
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.43 E-value=5.5e-13 Score=105.04 Aligned_cols=88 Identities=15% Similarity=0.101 Sum_probs=76.8
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECC-CCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCc
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDS-MGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGL 219 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~-dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~ 219 (251)
..+.+++||+.+++++|||++ .+|.|++++|+|..++ +|.+||+++..+.|.+||++||+|+|+|..+.
T Consensus 7 ~~~~~~~~l~~~~~~~LaT~~------~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~---- 76 (146)
T 2hq7_A 7 FLIESNELVESSKIVMVGTNG------ENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDN---- 76 (146)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC------GGGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSS----
T ss_pred HHHHHHHHHhcCCEEEEEEEC------CCCCEEEEEEEEEEEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCC----
Confidence 457899999999999999997 4799999999999764 47899999999999999999999999998764
Q ss_pred cccEEEEEEEEEeCCCchH
Q 025535 220 SNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 220 a~aRVTL~G~a~~Vedeee 238 (251)
....|++.|+++.++++++
T Consensus 77 ~~~~v~v~G~a~~v~d~~~ 95 (146)
T 2hq7_A 77 KFAGLMLVGTIEILHDRAS 95 (146)
T ss_dssp SSEEEEEEEEEEEECCHHH
T ss_pred CceEEEEEEEEEEEcCHHH
Confidence 1248999999999987654
No 20
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.43 E-value=7.3e-13 Score=110.47 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=76.6
Q ss_pred ccccCCCCCcHHH-HHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEE
Q 025535 132 ATSAHGLPRPALA-VRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLV 210 (251)
Q Consensus 132 ~~~~~~~~~~ae~-AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLt 210 (251)
.|++++++...++ +++||+++.+|+|||+. +|.|++++|+|+++ +|.+||.++....|.+||++||+|+|+
T Consensus 4 ~mRr~~~~~~d~e~i~~~L~~~~~~~Lat~~-------~g~P~~~Pv~f~~~-~~~ly~hta~~~~k~~~l~~np~V~~~ 75 (185)
T 2hti_A 4 AIRYTKRECKDEKKITEFLNKARTGFLGLST-------NDQPYVIPLNFVWH-NHAIYFHGASEGRKIKMIEANPEVCFT 75 (185)
T ss_dssp -------CCCCHHHHHHHHHHCCCEEEEEEE-------TTEEEEEEECCEEE-TTEEEEEEESSSHHHHHHHHCCEEEEE
T ss_pred ccccccccCCCHHHHHHHHhcCCEEEEEEee-------CCEEEEEEEEEEEE-CCEEEEEeCCcCHHHHHhhcCCeEEEE
Confidence 4788888776665 99999999999999997 78999999999998 578889988889999999999999999
Q ss_pred EEcC----CC----C-CccccEEEEEEEEEeCCCch
Q 025535 211 VQIP----GW----S-GLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 211 V~e~----e~----d-p~a~aRVTL~G~a~~Vedee 237 (251)
|.+. .. + ......|++.|+++.+++++
T Consensus 76 v~~~~~~~~~~v~~~~t~~y~sV~v~G~a~~v~d~~ 111 (185)
T 2hti_A 76 ICEDLGTIVSPVPAHTDTAYMSVIIFGTIEPVSAIE 111 (185)
T ss_dssp EEECC-------------CEEEEEEEEEEEECCCHH
T ss_pred EEeccccccccccccCcceEEEEEEEEEEEEECCHH
Confidence 9988 42 0 11224699999999998764
No 21
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.42 E-value=1.2e-12 Score=104.94 Aligned_cols=90 Identities=20% Similarity=0.208 Sum_probs=76.1
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSG 218 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp 218 (251)
+...+++++||+++.+|+|||+. +|.|++++|+|+++ +|.+||.. ....|.+||++||+|+|+|.+... .
T Consensus 6 ~~~~~~~~~~L~~~~~~~Lat~~-------~g~P~~~pv~~~~~-~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~-~ 75 (149)
T 2hq9_A 6 TLSALECTKVLTANRVGRLACAK-------DGQPYVVPLYYAYS-DAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQ-G 75 (149)
T ss_dssp ECCHHHHHHHHHHCCEEEEEEEE-------TTEEEEEEEECEEE-TTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECS-T
T ss_pred hcCHHHHHHHHHhCCEEEEEEcc-------CCeEEEEEEEEEEE-CCEEEEEe-CccHHHHHHhcCCcEEEEEEecCC-C
Confidence 45568899999999999999997 89999999999998 57777774 667899999999999999998753 2
Q ss_pred ccccEEEEEEEEEeCCCchH
Q 025535 219 LSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 219 ~a~aRVTL~G~a~~Vedeee 238 (251)
.....|++.|+++.++++++
T Consensus 76 ~~y~sV~v~G~a~~v~d~~~ 95 (149)
T 2hq9_A 76 RGWKSVVVDGRYEELPDLIG 95 (149)
T ss_dssp TCEEEEEEEEEEEECCSCGG
T ss_pred CcEEEEEEEEEEEEEcCccc
Confidence 22246999999999988764
No 22
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.40 E-value=1.6e-12 Score=104.24 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=76.3
Q ss_pred HHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccc
Q 025535 142 ALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSN 221 (251)
Q Consensus 142 ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~ 221 (251)
.++++++|+.+++++|||++ .||.|++.+|+|....++.+||+++..+.|.+||++||+|+|++..++....
T Consensus 4 ~~~~~~~l~~~~~~~LaTv~------~dG~P~~~p~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~~~-- 75 (150)
T 2hhz_A 4 LKDIMHILEDMKVGVFATLD------EYGNPHARHAHITAANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEGYLI-- 75 (150)
T ss_dssp HHHHHHHHHHTCEEEEEEEC------TTCCEEEEEEEEEEEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECSTTCC--
T ss_pred HHHHHHHHhcCCeEEEEEEC------CCCCEEEEEEEEEEEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCccee--
Confidence 57899999999999999998 4899999999998644567999999999999999999999999988663211
Q ss_pred cEEEEEEEEEeCCCch
Q 025535 222 ARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 222 aRVTL~G~a~~Vedee 237 (251)
..|++.|+|+.+++++
T Consensus 76 ~~v~i~G~a~~v~d~~ 91 (150)
T 2hhz_A 76 QVVRVEGTARPVENDY 91 (150)
T ss_dssp EEEEEEEEEEEECHHH
T ss_pred EEEEEEEEEEECCcHH
Confidence 5799999999998765
No 23
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.40 E-value=3.7e-13 Score=112.27 Aligned_cols=100 Identities=9% Similarity=0.069 Sum_probs=82.8
Q ss_pred ccccCCCCCcH-HHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEE
Q 025535 132 ATSAHGLPRPA-LAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLV 210 (251)
Q Consensus 132 ~~~~~~~~~~a-e~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLt 210 (251)
.|+++++.... +++++||+++.+|+|||+. .+|.|++++|+|+++ +|.+||.++....|.+||++||+|+|+
T Consensus 17 ~mr~~~~~~~d~~ei~~~L~~~~~~~Lat~~------~dg~P~v~Pv~f~~~-~~~lyfhta~~~~k~~~l~~np~V~~~ 89 (178)
T 2fg9_A 17 FQGMKTIVIEDKQRIESIILQADACFVGITD------LEGNPYVVPMNFGYE-NDTLYLHSGPEGGKIEMLQRNNNVCIT 89 (178)
T ss_dssp EEEEEEEEECCHHHHHHHHHHCSCEEEEEEC------TTSCEEEEEECCEEE-TTEEEEEECSCSHHHHHHHHCCEEEEE
T ss_pred eecchhhcCCCHHHHHHHHHhCCEEEEEEEC------CCCcEEEEEEEEEEE-CCEEEEEcCCcchHHHHhhcCCcEEEE
Confidence 36666665554 8899999999999999997 489999999999998 578888888889999999999999999
Q ss_pred EEcCCCCC-----------ccccEEEEEEEEEeCCCchH
Q 025535 211 VQIPGWSG-----------LSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 211 V~e~e~dp-----------~a~aRVTL~G~a~~Vedeee 238 (251)
|...+.-. .....|++.|+++.++++++
T Consensus 90 v~~~~~~is~~~~~~~~~t~~y~sV~v~G~a~~v~d~~e 128 (178)
T 2fg9_A 90 FSLGHKLVYQHKQVACSYSMRSESAMCRGKVEFIEDMEE 128 (178)
T ss_dssp EECCCEEEEEC----CEEEEEEEEEEEEEECEEECSHHH
T ss_pred EEeCCceeeccCCCCCCCcccEEEEEEEEEEEEECCHHH
Confidence 98876210 12346899999999987643
No 24
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.38 E-value=1.4e-12 Score=105.03 Aligned_cols=98 Identities=9% Similarity=-0.031 Sum_probs=77.3
Q ss_pred ccccCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECC---CCCeEEEecCCchhhhhhhcCCceE
Q 025535 132 ATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDS---MGHPIFSFSPLAIHTRNLLADPRCT 208 (251)
Q Consensus 132 ~~~~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~---dG~pif~vS~lA~HTrNL~aDPRVS 208 (251)
.++++.+....+++++||+++.+|+|||+. +|.|++.+|+|+++. +|.+||.++ ...|.+||++||+|+
T Consensus 7 ~~~~~~~~~~~~e~~~~L~~~~~~~Lat~~-------dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~ 78 (148)
T 3cp3_A 7 IMSDPITILDSSDSLSRLSSESVGRLVVHR-------KDDLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNSDVL 78 (148)
T ss_dssp ---CCEEEECHHHHHHHHHTCSEEEEEEEE-------TTEEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCSEEE
T ss_pred ccccccccCCHHHHHHHHhcCCEEEEEEEe-------CCEEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCCcEE
Confidence 356666677889999999999999999996 899999999999863 467788777 788899999999999
Q ss_pred EEEEcCCCCCccccEEEEEEEEEeCCCchHH
Q 025535 209 LVVQIPGWSGLSNARVTIFGDIFPLPEHQQV 239 (251)
Q Consensus 209 LtV~e~e~dp~a~aRVTL~G~a~~Vedeeee 239 (251)
|+|...+ .+. ...|.+.|+++.++++++.
T Consensus 79 ~~v~~~~-~~~-~~sV~v~G~a~~v~d~~e~ 107 (148)
T 3cp3_A 79 FEVDRFD-DAE-GWSVVLKGNAYVVRDTEEA 107 (148)
T ss_dssp EEEEECC---C-EEEEEEEEEEEECCCHHHH
T ss_pred EEEEECC-CCC-CeEEEEEEEEEEECCHHHH
Confidence 9998854 111 1379999999999876433
No 25
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=1.5e-12 Score=106.47 Aligned_cols=96 Identities=5% Similarity=-0.120 Sum_probs=73.3
Q ss_pred cccCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEE
Q 025535 133 TSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQ 212 (251)
Q Consensus 133 ~~~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~ 212 (251)
|..+.+....+++++||+++.+|.|||+. +|.||..+|+|+++ ++.+||..+. ..|..||++||+|||+|.
T Consensus 2 m~~~~~~l~~~e~~~lL~~~~~g~La~~~-------dg~P~vvPv~f~~~-~~~iyfh~a~-g~K~~~i~~~~~V~f~vd 72 (138)
T 3fkh_A 2 MDNPVNILNEQEALERLQSVSLGRVVVRR-------SDEMDIFPVNFIVD-KGAIYIRTAE-GNKLFSMNLNHDVLFEAD 72 (138)
T ss_dssp CCCSEEEECHHHHHHHHTTCSEEEEEEEE-------TTEEEEEEEEEEEE-TTEEEEEEEC---------CCSEEEEEEE
T ss_pred CCcccccCCHHHHHHHHccCCEEEEEEee-------CCEEEEEEEEEEEE-CCEEEEEeCC-ChHHHHhhcCCCEEEEEE
Confidence 45556677889999999999999999997 89999999999998 4678887776 668999999999999998
Q ss_pred cCCCCCccccEEEEEEEEEeCCCchHH
Q 025535 213 IPGWSGLSNARVTIFGDIFPLPEHQQV 239 (251)
Q Consensus 213 e~e~dp~a~aRVTL~G~a~~Vedeeee 239 (251)
..+.+ .. -.|.+.|+++.|+++++.
T Consensus 73 ~~~~~-~~-~SV~v~G~a~~v~d~~e~ 97 (138)
T 3fkh_A 73 EVKDG-KA-WSVVVRATAEIVRKLDEI 97 (138)
T ss_dssp EEETT-EE-EEEEEEEEEEECCSHHHH
T ss_pred ECCCC-CC-EEEEEEEEEEEECCHHHH
Confidence 76532 11 179999999999887543
No 26
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=5e-12 Score=101.85 Aligned_cols=88 Identities=15% Similarity=0.070 Sum_probs=75.9
Q ss_pred CCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE--ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 138 LPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA--PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 138 ~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa--~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
+....+.+++||+. ++++|||++ .+|.|++++++|. .| ++.++|.......|.+||++||+|+|++.+.+
T Consensus 25 ~~~l~~~~~~~l~~-~~~~LATv~------~dG~P~~~p~~f~~~~d-~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~ 96 (140)
T 2htd_A 25 TNKLTEEQVNLFKN-NLVYLATVD------ADGNPQVGPKGSMTVLD-PSHLQYLEKTKGEAYENIKRGSKVALVAADVP 96 (140)
T ss_dssp CSCCCHHHHHHHHH-SCEEEEEEC------TTCCEEEEEETTCEEEE-TTEEEEEESSCCHHHHHHHTTCCEEEEEEETT
T ss_pred cccCCHHHHHHHhC-CCEEEEEEC------CCCCEEEecceeEEecC-CCEEEEeccCCchHHHHhhcCCeEEEEEEecC
Confidence 45566789999999 999999998 4899999999995 44 57799999999999999999999999999887
Q ss_pred CCCccccEEEEEEEEEeCCCch
Q 025535 216 WSGLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 216 ~dp~a~aRVTL~G~a~~Vedee 237 (251)
. ..+++|.|+++.+++++
T Consensus 97 ~----~~~v~i~G~a~~v~d~~ 114 (140)
T 2htd_A 97 S----HTAVRVLATAEVHEDDD 114 (140)
T ss_dssp T----TEEEEEEEEEEEESSSH
T ss_pred C----CCEEEEEEEEEEecChH
Confidence 3 24899999999998763
No 27
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.35 E-value=1.9e-12 Score=106.69 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=74.4
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCC-CcceeEEEeeEE--CCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCC
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRRE-GYPFGSLVDFAP--DSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWS 217 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~D-G~P~gS~V~Fa~--D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~d 217 (251)
..+.+++||+..++++|||++ .| |.|+++++.|+. | +|.++|+++..+.|.+||++||+|+|+|.+++ .
T Consensus 10 L~~e~~elL~~~~~~~LATv~------~d~G~P~~sp~~~~~~~d-~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~-~ 81 (151)
T 2q9k_A 10 LSEQQMKALTDLPLVFLITHD------QSKSWPITHAISWVYAKD-ETTIRFAIEADSLLVKTLADHPVFTLIFFADQ-S 81 (151)
T ss_dssp CCHHHHHHTSSCCCEEEEECC------TTSSSCEEEEECCEEEEE-TTEEEEEEETTCTHHHHHHHSCCEEEEEEETT-E
T ss_pred HHHHHHHHHhcCCEEEEEEEc------CCCCcEeEeeeEEEEEeC-CCEEEEEECCCcHHHHHHHhCCcEEEEEECCC-C
Confidence 445899999999999999998 48 999999997773 5 68899999999999999999999999999876 2
Q ss_pred CccccEEEEEEEEEeCCCch
Q 025535 218 GLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 218 p~a~aRVTL~G~a~~Vedee 237 (251)
.+.+.|+|+.+.++.
T Consensus 82 -----~~~i~G~A~~v~d~~ 96 (151)
T 2q9k_A 82 -----TYSLTCTDVAAWETT 96 (151)
T ss_dssp -----EEEEEEEEEEEECCS
T ss_pred -----EEEEEEEEEEEeCcc
Confidence 579999999998764
No 28
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.33 E-value=4.9e-12 Score=103.16 Aligned_cols=87 Identities=7% Similarity=0.026 Sum_probs=76.2
Q ss_pred CcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCc
Q 025535 140 RPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGL 219 (251)
Q Consensus 140 ~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~ 219 (251)
...+.++++|+.+++++|||++ +|.|++.+|+|....++.+||+++..+.|.+||++||+|+|++...+
T Consensus 18 ~~~~~~~~~l~~~~~~~LaTv~-------dG~P~~rpv~~~~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~---- 86 (150)
T 2ig6_A 18 QGMKRALEFLKECGVFYLATNE-------GDQPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK---- 86 (150)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEE-------TTEEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT----
T ss_pred cCHHHHHHHHHhCCeEEEEEcc-------CCceEEEEeEEEEEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC----
Confidence 4457899999999999999997 79999999999863356799999999999999999999999998766
Q ss_pred cccEEEEEEEEEeCCCchH
Q 025535 220 SNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 220 a~aRVTL~G~a~~Vedeee 238 (251)
...|++.|+|+.+++++.
T Consensus 87 -~~~v~i~G~a~~v~d~e~ 104 (150)
T 2ig6_A 87 -GQWIRLTGEVANDDRREV 104 (150)
T ss_dssp -SCEEEEEEEEEECCCHHH
T ss_pred -CeEEEEEEEEEEECCHHH
Confidence 257999999999988753
No 29
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.29 E-value=1.6e-11 Score=99.49 Aligned_cols=86 Identities=13% Similarity=-0.060 Sum_probs=74.3
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECC--CCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCC
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDS--MGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSG 218 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~--dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp 218 (251)
..+.+++||+.+++++|||++ .+| |++.+|+|..+. +|.++|+++..+.|.+||++||+|+|++..++..
T Consensus 8 l~~~~~~~l~~~~~~~LaT~~------~d~-~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~- 79 (147)
T 3dmb_A 8 LQDKFWKALKSDRTVMLGLDG------VED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHD- 79 (147)
T ss_dssp HHHHHHHHHHHHCEEEEEETT------SSS-CCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTTSS-
T ss_pred HHHHHHHHHhcCCEEEEEEEc------CCC-CceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCCCC-
Confidence 456799999999999999997 355 899999999753 5789999999999999999999999999877621
Q ss_pred ccccEEEEEEEEEeCCCch
Q 025535 219 LSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 219 ~a~aRVTL~G~a~~Vedee 237 (251)
..|+|.|+|+.+++.+
T Consensus 80 ---~~v~v~G~a~~~~d~~ 95 (147)
T 3dmb_A 80 ---LFASISGSLREDTDPA 95 (147)
T ss_dssp ---EEEEEEEEEEECCCHH
T ss_pred ---eEEEEEEEEEEecCHH
Confidence 4799999999998764
No 30
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.28 E-value=1e-11 Score=106.22 Aligned_cols=99 Identities=9% Similarity=0.038 Sum_probs=77.6
Q ss_pred CccccCCCC-CcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEE
Q 025535 131 SATSAHGLP-RPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTL 209 (251)
Q Consensus 131 ~~~~~~~~~-~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSL 209 (251)
..|+++++. ...+++++||+++.+|+|||+. +|.|++++++|+.+ ++.+||.++....|.+||++||+|+|
T Consensus 10 ~~mR~~~~~~~d~~ei~~~L~~~~~~~Lat~~-------dg~P~v~Pv~f~~~-~~~lyfhta~~~~k~~~l~~np~V~~ 81 (209)
T 2fur_A 10 KVTRYPERASYSDEDLVAMLDRNFTCTVSFID-------GGIPYAIPMMLASE-GKTIYLHGSMKSRIYGILKTGQLIAI 81 (209)
T ss_dssp -------CEECCHHHHHHHHHHCSEEEEEEEE-------TTEEEEEEEECEEE-TTEEEEEEETTSHHHHHHHTTCCEEE
T ss_pred ccccchhhccCCHHHHHHHHHhCCEEEEEEcc-------CCEEEEEEEEEEEE-CCEEEEEeCCcCHHHHHhhcCCeEEE
Confidence 446777764 4457899999999999999997 89999999999998 47888888888999999999999999
Q ss_pred EEEcCCCC--C-------ccccEEEEEEEEEeCCCch
Q 025535 210 VVQIPGWS--G-------LSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 210 tV~e~e~d--p-------~a~aRVTL~G~a~~Vedee 237 (251)
+|...+.- + .....|++.|+++.+++++
T Consensus 82 ~v~~~~~~v~~~~~~~~t~~y~sV~v~G~a~~v~d~~ 118 (209)
T 2fur_A 82 SLLEINGIVLAKEIKNNSINYVSALIFGRPYEIDDTE 118 (209)
T ss_dssp EEEEEEEEEECSBGGGCEEEEEEEEEEECCEECCCHH
T ss_pred EEEcCCeeecCCCCCCCccEEEEEEEEEEEEEECCHH
Confidence 99887520 0 1124699999999998863
No 31
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=99.25 E-value=1.6e-11 Score=106.35 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=82.3
Q ss_pred ccccCCCCCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCC--eEEEecCCchhhhhhhcCCceEE
Q 025535 132 ATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGH--PIFSFSPLAIHTRNLLADPRCTL 209 (251)
Q Consensus 132 ~~~~~~~~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~--pif~vS~lA~HTrNL~aDPRVSL 209 (251)
.|+++++ ...+++++||+++.+|+|||+... .+.+|.|++++|+|+++ +|. +||.++....|.+||++||+|+|
T Consensus 36 ~mRr~~r-~d~~ei~~~L~~~~~~~Lat~~~~--~~~dg~P~v~Pv~f~~d-~~~~~Lyfhta~~~~K~~~l~~np~V~~ 111 (216)
T 2vpa_A 36 SRRPQNR-QSDEWIRELLLRGTIARVATLWQG--EDGAAFPFITPLAYAYR-PEQGDLVYHTNVVGRLRANAGQGHPATL 111 (216)
T ss_dssp CCCSTTB-CCHHHHHHHHHHCCEEEEEEEEEC--TTSCEEEEEEEEECEEE-TTTTEEEEECCCCCSSBSSCSSEEEEEE
T ss_pred ccccccc-CCHHHHHHHHHhCCEEEEEEccCC--CCCCCceEEEEEEEEEE-CCeeEEEEEecCcCHHHHHhccCCcEEE
Confidence 5889999 888999999999999999999600 01289999999999998 566 88888888999999999999999
Q ss_pred EEEcCCC---CC----c--cccEEEEEEEEEeCCCc
Q 025535 210 VVQIPGW---SG----L--SNARVTIFGDIFPLPEH 236 (251)
Q Consensus 210 tV~e~e~---dp----~--a~aRVTL~G~a~~Vede 236 (251)
+|...+. .. + ....|.+.|+++.| ++
T Consensus 112 ~v~~~~~~v~~~~~~~~t~~y~sV~v~G~a~~v-d~ 146 (216)
T 2vpa_A 112 EVSEIGQFLPSNSPLELSVQYRSVMVFGTARVL-AG 146 (216)
T ss_dssp EEEEEEEEECCSSGGGCEEEEEEEEEEEEEEEC-CH
T ss_pred EEEeCCeeccCccCCCCcccEEEEEEEEEEEEE-CH
Confidence 9988762 10 1 12469999999999 65
No 32
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.19 E-value=8.3e-11 Score=96.27 Aligned_cols=84 Identities=14% Similarity=0.054 Sum_probs=73.4
Q ss_pred HHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEE-CCCCC-eEEEecCCchhhhhhhcCCc-eEEEEEcCCCCC
Q 025535 142 ALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAP-DSMGH-PIFSFSPLAIHTRNLLADPR-CTLVVQIPGWSG 218 (251)
Q Consensus 142 ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~-D~dG~-pif~vS~lA~HTrNL~aDPR-VSLtV~e~e~dp 218 (251)
.+.++++|+.+++++||| + |.|++.+|+|.. +.+|. +||+++..+.|.+||++||+ |+|++.....
T Consensus 6 ~~~~~~~L~~~~~~~LaT-d--------G~P~~rpv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~-- 74 (160)
T 2qea_A 6 THEFWDRLEDVRSGMLGI-K--------GQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE-- 74 (160)
T ss_dssp HHHHHHHHTTCCCEEEEE-T--------TSSCCEEECCBCCTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTT--
T ss_pred HHHHHHHHhcCCEEEEEe-C--------CCeeEEEeeeeEecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCC--
Confidence 578999999999999999 5 999999999984 45687 99999999999999999999 9999987652
Q ss_pred ccccEEEEEEEEEeCCCchH
Q 025535 219 LSNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 219 ~a~aRVTL~G~a~~Vedeee 238 (251)
...|+|.|+|+.+++.+.
T Consensus 75 --~~~v~v~G~a~~v~d~~~ 92 (160)
T 2qea_A 75 --GLYADLDGTLERSTDREA 92 (160)
T ss_dssp --TEEEEEEEEEEEECCHHH
T ss_pred --CeEEEEEEEEEEEcCHHH
Confidence 247999999999987644
No 33
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.18 E-value=6.1e-11 Score=100.79 Aligned_cols=88 Identities=13% Similarity=-0.055 Sum_probs=76.0
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECC--CCCeEEEecCCchhhhhhhcCCceEEEEEcCCC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDS--MGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW 216 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~--dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~ 216 (251)
....+.+.+||+.+++++|||++ .|| |++.+|+|..+. +|.+||+++..+.|++||++||+|+|++.+++.
T Consensus 25 ~el~e~i~~~L~~~~~~~LaTv~------~dg-p~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~ 97 (182)
T 3u35_A 25 KELQEKFWKALKSDRTVMLGLDG------VED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGH 97 (182)
T ss_dssp HHHHHHHHHHHHHHCEEEECCTT------SGG-GCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTS
T ss_pred HHHHHHHHHHHccCCEEEEEEec------CCC-CcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCC
Confidence 44567899999999999999997 354 899999999754 588999999999999999999999999987752
Q ss_pred CCccccEEEEEEEEEeCCCch
Q 025535 217 SGLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 217 dp~a~aRVTL~G~a~~Vedee 237 (251)
. ..|+|.|+|+.+++.+
T Consensus 98 ~----~~V~v~G~a~vv~D~e 114 (182)
T 3u35_A 98 D----LFASISGSLREDTDPA 114 (182)
T ss_dssp S----EEEEEEEEEEECCCHH
T ss_pred C----eEEEEEEEEEEEcCHH
Confidence 1 4799999999998764
No 34
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=98.88 E-value=3.8e-09 Score=90.51 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=66.8
Q ss_pred HHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE-ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEE
Q 025535 148 LMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA-PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTI 226 (251)
Q Consensus 148 LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL 226 (251)
-+...++++|||++ .||.|++.+|.+. .+++| ++|++...+.|.+||++||+|+|++...+. ...|.|
T Consensus 27 ~~~~~~~~~LATv~------~dG~P~~R~v~~~~~d~~g-l~F~T~~~S~K~~~L~~np~v~l~f~~~~~----~~qvri 95 (199)
T 1dnl_A 27 KLADPTAMVVATVD------EHGQPYQRIVLLKHYDEKG-MVFYTNLGSRKAHQIENNPRVSLLFPWHTL----ERQVMV 95 (199)
T ss_dssp TCSCTTEEEEEEEC------TTSCEEEEEEECCEEETTE-EEEEEETTSHHHHHHHHCCEEEEEECCGGG----TEEEEE
T ss_pred CcCCCcEEEEEEEC------CCCCEEEEEEEEEEEcCCE-EEEEECCCCHHHHHHhhCCeEEEEEEcCCC----CEEEEE
Confidence 45567899999998 5899999999985 45556 999999999999999999999999987651 247999
Q ss_pred EEEEEeCCCch
Q 025535 227 FGDIFPLPEHQ 237 (251)
Q Consensus 227 ~G~a~~Vedee 237 (251)
.|+|+.+++++
T Consensus 96 ~G~a~~v~d~~ 106 (199)
T 1dnl_A 96 IGKAERLSTLE 106 (199)
T ss_dssp EEEEEECCHHH
T ss_pred EEEEEEeCCcc
Confidence 99999998753
No 35
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=98.87 E-value=1.5e-08 Score=83.92 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=74.0
Q ss_pred HHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE-E-CCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCc
Q 025535 142 ALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA-P-DSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGL 219 (251)
Q Consensus 142 ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~-D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~ 219 (251)
.+.+.++|..++.++|||.. +|.|.+.+|.|. . ..++.+||+++....++++|.+||+|+|+....+...
T Consensus 4 ~~~i~~~L~~~~~~~LAT~~-------~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~~- 75 (145)
T 3ba3_A 4 ISLLKQVVQSTNKIALSTAV-------NNEADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGTA- 75 (145)
T ss_dssp CHHHHHHHHTEEEEEEEEEE-------TTEEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTCT-
T ss_pred HHHHHHHHHhCCcEEEEECC-------CCCEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCCc-
Confidence 35678899999999999965 899999999999 3 3457899999999999999999999999866555222
Q ss_pred cccEEEEE-EEEEeCCCchHHHH
Q 025535 220 SNARVTIF-GDIFPLPEHQQVVI 241 (251)
Q Consensus 220 a~aRVTL~-G~a~~Vedeeee~a 241 (251)
....|.+. |+|+..+++..+..
T Consensus 76 ~~~~IRi~~G~a~~~~~~~~~~k 98 (145)
T 3ba3_A 76 GNPYLRAQHVKLQRSTKTMTDLL 98 (145)
T ss_dssp TCCEEEEEEEEEEECSCCHHHHH
T ss_pred cceEEEEEeEEEEEcCCchHHHH
Confidence 34578999 99999865433433
No 36
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=98.83 E-value=1.2e-08 Score=87.64 Aligned_cols=92 Identities=12% Similarity=0.136 Sum_probs=75.1
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCC-CCeEEEecCCchhhhhhhcCCceEEEEEcCCC-
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSM-GHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW- 216 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~d-G~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~- 216 (251)
....+.+.+||+++.+|+|+|.. +|.||+++++|+++++ +.+||..+....+.++|.. |+|+++|..+..
T Consensus 9 ~~d~~~i~~il~~~~~g~L~~~~-------~~~py~~plpf~~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~y 80 (202)
T 2ol5_A 9 VNDPDVAYQVIEENSFATLVSMH-------QRELFATHLPLLLDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCY 80 (202)
T ss_dssp --CCTHHHHHHHHSCEEEEEEEE-------TTEEEEEEEECEECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHCCEEEEEEcc-------CCccEEEEeeEEEECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEE
Confidence 44557899999999999999998 7899999999999843 3688888888899999999 999999887752
Q ss_pred ---CCc---------cccEEEEEEEEEeCCCchH
Q 025535 217 ---SGL---------SNARVTIFGDIFPLPEHQQ 238 (251)
Q Consensus 217 ---dp~---------a~aRVTL~G~a~~Vedeee 238 (251)
+++ ....|.+.|+++.|+++++
T Consensus 81 isps~y~~~~~vpT~nY~SV~~~G~~~~v~D~~e 114 (202)
T 2ol5_A 81 ISPSWYETNQAVPTWNYVAVHVYGNVELINDQGE 114 (202)
T ss_dssp ECGGGSSCSCCCCEEEEEEEEEEEEEEECCCHHH
T ss_pred echhhcccCCCCCCcceEEEEEEEEEEEECCHHH
Confidence 222 3457999999999986644
No 37
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=98.75 E-value=3.9e-08 Score=86.14 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=66.2
Q ss_pred HHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE-ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEE
Q 025535 148 LMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA-PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTI 226 (251)
Q Consensus 148 LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL 226 (251)
-+...++++|||++ .||.|.+-+|.+. .|++| ++|++...+.|.+||++||+|+|++...+. ...|.|
T Consensus 52 ~~~~~~~~~LATvd------~dG~P~~R~v~l~~~d~~g-l~F~T~~~S~K~~eL~~nP~val~f~~~~~----~rqvrI 120 (222)
T 1ty9_A 52 GIREPRALALATAD------SQGRPSTRIVVISEISDAG-VVFSTHAGSQKGRELLHNPWASGVLYWRET----SQQIIL 120 (222)
T ss_dssp TCSSTTEEEEEEEC------TTCCEEEEEEECCEECSSE-EEEEEETTSHHHHHHHHCCEEEEEEEETTT----TEEEEE
T ss_pred ccCCCCEEEEEEEC------CCCCEEEEEEEEEEEcCCE-EEEEECCCCcchHHHhhCCeEEEEEEcCCC----CeEEEE
Confidence 34567899999998 5899999999985 56555 899999999999999999999999987662 247999
Q ss_pred EEEEEeCCCc
Q 025535 227 FGDIFPLPEH 236 (251)
Q Consensus 227 ~G~a~~Vede 236 (251)
.|+|+.++++
T Consensus 121 ~G~ae~v~~~ 130 (222)
T 1ty9_A 121 NGQAVRLPNA 130 (222)
T ss_dssp EEEEEECCHH
T ss_pred EEEEEEEccH
Confidence 9999999754
No 38
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=98.70 E-value=3.1e-08 Score=89.25 Aligned_cols=78 Identities=23% Similarity=0.257 Sum_probs=67.1
Q ss_pred HhhCCeEEEEeecCCcCCCCCCcceeEEEeeE-ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEEE
Q 025535 149 MEQARFAHLCTVMSRMHHRREGYPFGSLVDFA-PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIF 227 (251)
Q Consensus 149 L~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~ 227 (251)
+...+.++|||++ .||.|.+-+|.+. .|++| ++|++...+.|.+||++||+|+|++...+. ...|.|.
T Consensus 75 l~e~~~~~LATvd------~dG~P~~R~V~lk~~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~----~rqVrI~ 143 (261)
T 1nrg_A 75 IGEANAMCLATCT------RDGKPSARMLLLKGFGKDG-FRFFTNFESRKGKELDSNPFASLVFYWEPL----NRQVRVE 143 (261)
T ss_dssp CSCTTEEEEEEEC------TTSCEEEEEEECCCEETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG----TEEEEEE
T ss_pred CCCCcEEEEEEEC------CCCCeeEEEEEEEEEcCCE-EEEEECCCChhHHHHhhCCeEEEEEEeCCC----CEEEEEE
Confidence 4457899999998 5899999999985 56566 999999999999999999999999987762 2479999
Q ss_pred EEEEeCCCch
Q 025535 228 GDIFPLPEHQ 237 (251)
Q Consensus 228 G~a~~Vedee 237 (251)
|+|+.+++++
T Consensus 144 G~ae~v~d~e 153 (261)
T 1nrg_A 144 GPVKKLPEEE 153 (261)
T ss_dssp EEEEECCHHH
T ss_pred EEEEEecCcc
Confidence 9999998775
No 39
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=98.68 E-value=4.2e-08 Score=86.53 Aligned_cols=77 Identities=10% Similarity=0.062 Sum_probs=65.7
Q ss_pred HhhCCeEEEEeec-CCcCCCCCCcceeEEEeeE-ECCCCCeEEEecCC-chhhhhhhcCCceEEEEEcCCCCCccccEEE
Q 025535 149 MEQARFAHLCTVM-SRMHHRREGYPFGSLVDFA-PDSMGHPIFSFSPL-AIHTRNLLADPRCTLVVQIPGWSGLSNARVT 225 (251)
Q Consensus 149 L~~a~~gvLATls-~~~~~~~DG~P~gS~V~Fa-~D~dG~pif~vS~l-A~HTrNL~aDPRVSLtV~e~e~dp~a~aRVT 225 (251)
+...+.++|||++ + +|.|.+-+|.+. .|++| ++||+... +.|.+||.+||+|+|++..... ...|.
T Consensus 52 ~~~~~~~~LATvd~~------dG~P~~R~V~lk~~d~~g-~~F~Tn~~~S~K~~eL~~NP~val~f~~~~~----~rqVr 120 (228)
T 1ci0_A 52 ETLPEAITFSSAELP------SGRVSSRILLFKELDHRG-FTIYSNWGTSRKAHDIATNPNAAIVFFWKDL----QRQVR 120 (228)
T ss_dssp CSCTTEEEEEEEETT------TTEEEEEEEECCEECSSS-EEEEEECSSSHHHHHHHHCCEEEEEEEETTT----TEEEE
T ss_pred CCCCCEEEEEEeeCC------CCCeEEEEEEEEEECCCE-EEEEeCCCCCcchHHHhhCCeEEEEEEeCCC----CEEEE
Confidence 4567899999997 5 899999999985 56566 99999999 9999999999999999987762 24799
Q ss_pred EEEEEEeCCCc
Q 025535 226 IFGDIFPLPEH 236 (251)
Q Consensus 226 L~G~a~~Vede 236 (251)
|.|+|+.++++
T Consensus 121 I~G~ae~v~~~ 131 (228)
T 1ci0_A 121 VEGITEHVNRE 131 (228)
T ss_dssp EEEEEEECCHH
T ss_pred EEEEEEEcCch
Confidence 99999999754
No 40
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=98.63 E-value=1.1e-07 Score=81.04 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=64.6
Q ss_pred CeEEEEeecCCcCCCCCCcceeEEEeeE-ECCC-CCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEEEEEE
Q 025535 153 RFAHLCTVMSRMHHRREGYPFGSLVDFA-PDSM-GHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDI 230 (251)
Q Consensus 153 ~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D~d-G~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~G~a 230 (251)
++++|||++ .||.|.+.+|.+. .|++ +.++|++...+.|.+||.+||+|+|++...+. ...|.|.|+|
T Consensus 25 ~~~~LATv~------~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~f~~~~~----~~qvri~G~a 94 (195)
T 2i51_A 25 RYLQLATVQ------PNGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEICWYFPNT----REQFRMAGDL 94 (195)
T ss_dssp GEEEEEEEC------TTSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEEEEETTT----TEEEEEEEEE
T ss_pred CEEEEEEEC------CCCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEEEEeCCC----CEEEEEEEEE
Confidence 489999998 4899999999885 4543 46999999999999999999999999987662 2379999999
Q ss_pred EeCCCchH
Q 025535 231 FPLPEHQQ 238 (251)
Q Consensus 231 ~~Vedeee 238 (251)
+.+++++.
T Consensus 95 ~~v~~~~~ 102 (195)
T 2i51_A 95 TLISSDDS 102 (195)
T ss_dssp EEECSSST
T ss_pred EEEChHHh
Confidence 99988755
No 41
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=98.58 E-value=1.2e-07 Score=79.61 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=63.8
Q ss_pred CCeEEEEeecCCcCCCCCCcceeEEEeeE-EC-CCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEEEEE
Q 025535 152 ARFAHLCTVMSRMHHRREGYPFGSLVDFA-PD-SMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGD 229 (251)
Q Consensus 152 a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D-~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~G~ 229 (251)
.++++|||++ .+| |.+-+|.|. .+ +++.++|++...+.|.+||++||+|+|++..++. ...|.|.|+
T Consensus 29 ~~~~~LATv~------~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~----~~qvri~G~ 97 (175)
T 2ou5_A 29 ARHPTLATIG------TDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKA----SLQVRAKAI 97 (175)
T ss_dssp GGSCEEEEEE------TTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGG----TEEEEEEEE
T ss_pred cceEEEEEeC------CCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCC----CEEEEEEEE
Confidence 3889999998 489 999777653 44 3466889999999999999999999999987762 246889999
Q ss_pred EEeCCCchHHHH
Q 025535 230 IFPLPEHQQVVI 241 (251)
Q Consensus 230 a~~Vedeeee~a 241 (251)
|+.++++++.+.
T Consensus 98 a~~~~d~~~~w~ 109 (175)
T 2ou5_A 98 AKILPGDPNLFA 109 (175)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEeCcHHHHHH
Confidence 999988844443
No 42
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=98.49 E-value=3.3e-07 Score=82.03 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=65.3
Q ss_pred HhhCCeEEEEeecCCcCCCCCCcceeEEEeeE-ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCCCCccccEEEEE
Q 025535 149 MEQARFAHLCTVMSRMHHRREGYPFGSLVDFA-PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIF 227 (251)
Q Consensus 149 L~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa-~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~ 227 (251)
+...+.++|||++ +|.|.+-+|.+. .|++| ++||+...+.|.++|.+||+|+|++...+. ...|.|.
T Consensus 77 ~~e~~~~~LATvd-------dG~P~~R~Vllk~~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~----~rqVrI~ 144 (246)
T 2a2j_A 77 VSEPNAMVLATVA-------DGKPVTRSVLCKILDESG-VAFFTSYTSAKGEQLAVTPYASATFPWYQL----GRQAHVQ 144 (246)
T ss_dssp CSSTTEEEEEEEE-------TTEEEEEEEEEEEEETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG----TEEEEEE
T ss_pred CCCCceEEEEEcC-------CCceEEEEEEEEEEcCCE-EEEEEcCCChhhHHHhhCCeEEEEEEeCCC----CEEEEEE
Confidence 3466899999997 799999999985 56556 999999999999999999999999987652 2479999
Q ss_pred EEEEeCCCch
Q 025535 228 GDIFPLPEHQ 237 (251)
Q Consensus 228 G~a~~Vedee 237 (251)
|+|+.+++++
T Consensus 145 G~ae~v~~~e 154 (246)
T 2a2j_A 145 GPVSKVSTEE 154 (246)
T ss_dssp EEEEECCHHH
T ss_pred EEEEEeccHh
Confidence 9999997654
No 43
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.09 E-value=1.9e-05 Score=66.28 Aligned_cols=66 Identities=15% Similarity=-0.006 Sum_probs=50.2
Q ss_pred HHHHHHHHhh-CCeEEEEeecCCcCCCCCCcceeEEEeeE--ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 142 ALAVRNLMEQ-ARFAHLCTVMSRMHHRREGYPFGSLVDFA--PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 142 ae~AR~LL~~-a~~gvLATls~~~~~~~DG~P~gS~V~Fa--~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
.+.+|+|++. .-.|+|||.+ .||.|-.+++... +| |+.++|.--......+||++||+|+++|...
T Consensus 19 ~~~~r~l~~~~v~~~~LATAd------kdG~PNVa~~~~~~~~D-d~tI~iad~f~~kT~~NL~eNP~aav~~~~~ 87 (148)
T 3in6_A 19 LEKARSLINANYISTTLSTVD------RNYEVNIAVISVLEMIG-DDTIICARFGADKTYANLKETGKGVFMVLLT 87 (148)
T ss_dssp HHHHHHHHHHTCSSEEEEEEC------TTCCEEEEECCCEEEET-TTEEEEEESSCHHHHHHHHHHCEEEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEEEcC------CCCCccEEEEeeeEEec-CCEEEEEeccchhHHHHHHhCCcEEEEEEEc
Confidence 4678899887 5799999999 5999999988744 45 4544444344555568999999999999843
No 44
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=97.94 E-value=5.1e-05 Score=61.51 Aligned_cols=88 Identities=10% Similarity=0.016 Sum_probs=69.9
Q ss_pred HHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEe--eE-ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCCC--
Q 025535 142 ALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVD--FA-PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGW-- 216 (251)
Q Consensus 142 ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~--Fa-~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e~-- 216 (251)
.+...++|.......|||++ +|.|+..++| |. +.+|.+++|.-..+..+.+||++||+|+|+|...+.
T Consensus 3 te~~~e~l~~~~~~~iaT~~-------~g~Pnvvptw~~~~~v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g 75 (122)
T 3a6r_A 3 PGTFFEVLKNQGVVAIATQG-------EDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAG 75 (122)
T ss_dssp CHHHHHHTTSCCEEEEEEEC-------SSSEEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEEC
T ss_pred CHHHHHHHhcCCeEEEEEcC-------CCCCcEEeeeceEEEEecCCEEEEEccccHHHHHHHhhCCeEEEEEEeccccc
Confidence 35677888877888999997 8999998844 44 223667888889999999999999999999987762
Q ss_pred -CCccccEEEEEEEEEeCCCch
Q 025535 217 -SGLSNARVTIFGDIFPLPEHQ 237 (251)
Q Consensus 217 -dp~a~aRVTL~G~a~~Vedee 237 (251)
.. ......+.|+++.+.+++
T Consensus 76 ~~g-~~~gf~ikGta~~~~~G~ 96 (122)
T 3a6r_A 76 RNG-PGTGFLIRGSAAFRTDGP 96 (122)
T ss_dssp SSS-EEEEEEEEEEEEEESSSH
T ss_pred ccC-CCceEEEEEEEEEEeccH
Confidence 22 234689999999998763
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=97.81 E-value=9.7e-05 Score=59.68 Aligned_cols=73 Identities=21% Similarity=0.205 Sum_probs=53.9
Q ss_pred hCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecC-C----chhhhhhhcCCceEEEEEcCCCCCccccEEE
Q 025535 151 QARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSP-L----AIHTRNLLADPRCTLVVQIPGWSGLSNARVT 225 (251)
Q Consensus 151 ~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~-l----A~HTrNL~aDPRVSLtV~e~e~dp~a~aRVT 225 (251)
.....+|.|.. ++.|.|+.++|+|..++ +.+++..|. . ..-++||+++|+|+|.+... +
T Consensus 14 g~p~~~Ltt~G-----RkSG~pr~tPv~~~~~g-~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~~~----------~ 77 (122)
T 3r5l_A 14 KIPVALLTTTG-----RKTGQPRVNPLYFLRDG-GRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKE----------V 77 (122)
T ss_dssp SCCCEEEEEEC-----TTTCSEEEEEEEEEEET-TEEEEECSCCGGGCSCHHHHHHHHCCEEEEEETTE----------E
T ss_pred CCcEEEEEEcC-----CCCCCEEEEEEEEEEEC-CEEEEEEecCCCCCCCHHHHhhccCCcEEEEECCE----------E
Confidence 35688999997 57899999999999874 445544442 2 24489999999999977321 4
Q ss_pred EEEEEEeCCCchHH
Q 025535 226 IFGDIFPLPEHQQV 239 (251)
Q Consensus 226 L~G~a~~Vedeeee 239 (251)
+.++++.++++|.+
T Consensus 78 ~~~~A~~l~~~Er~ 91 (122)
T 3r5l_A 78 LDLTARDATDEERA 91 (122)
T ss_dssp EEEEEEECCHHHHH
T ss_pred EEEEEEECCcchHH
Confidence 66778888776544
No 46
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=96.61 E-value=0.0043 Score=51.33 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=53.8
Q ss_pred hCCeEEEEeecCCcCCCCCCcceeEEEeeEECCC--CCeEEEecC-----CchhhhhhhcCCceEEEEEcCCCCCccccE
Q 025535 151 QARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSM--GHPIFSFSP-----LAIHTRNLLADPRCTLVVQIPGWSGLSNAR 223 (251)
Q Consensus 151 ~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~d--G~pif~vS~-----lA~HTrNL~aDPRVSLtV~e~e~dp~a~aR 223 (251)
......|-|.. ++.|.|+.+++.|..+++ +..++..|. ...-.+||+++|+|.|.+...
T Consensus 29 g~~~llLtt~G-----RkSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g~~--------- 94 (143)
T 3h96_A 29 GAPMVLVHHVG-----RKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGTE--------- 94 (143)
T ss_dssp TSCEEEEEEEC-----TTTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEETTE---------
T ss_pred CCcEEEEEEcC-----CCCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEECCE---------
Confidence 35688999997 578999999999998752 555554453 245578999999998876221
Q ss_pred EEEEEEEEeCCCchHH
Q 025535 224 VTIFGDIFPLPEHQQV 239 (251)
Q Consensus 224 VTL~G~a~~Vedeeee 239 (251)
++.++++.++++|.+
T Consensus 95 -~~~~~A~~~~~~Er~ 109 (143)
T 3h96_A 95 -TYAVGVTEVTGEDRD 109 (143)
T ss_dssp -EEEEEEEEECHHHHH
T ss_pred -EEEEEEEecCchHHH
Confidence 456777888776554
No 47
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=96.61 E-value=0.0044 Score=51.56 Aligned_cols=71 Identities=23% Similarity=0.078 Sum_probs=51.5
Q ss_pred CeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCC-----chhhhhhhcCCceEEEEEcCCCCCccccEEEEE
Q 025535 153 RFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPL-----AIHTRNLLADPRCTLVVQIPGWSGLSNARVTIF 227 (251)
Q Consensus 153 ~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~l-----A~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~ 227 (251)
....|-|.. ++.|.|+.+++.|..+ +|..++..|.. ..-.+||+++|+|.|.+.. -++.
T Consensus 40 p~~lLtt~G-----RkSG~~r~tPl~~~~~-~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~----------~~~~ 103 (147)
T 3r5y_A 40 PLVILTTVG-----RKTGALRKTPVMRVEH-DGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDKD----------AVLS 103 (147)
T ss_dssp EEEEEEEEC-----TTTCCEEEEEEECCEE-TTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEETT----------EEEE
T ss_pred cEEEEEEcC-----CCCCCEEEEEEEEEEE-CCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEECC----------EEEE
Confidence 467888886 5789999999999987 45555544432 2457899999999887522 1466
Q ss_pred EEEEeCCCchHH
Q 025535 228 GDIFPLPEHQQV 239 (251)
Q Consensus 228 G~a~~Vedeeee 239 (251)
++++.++++|.+
T Consensus 104 ~~Ar~~~~~Er~ 115 (147)
T 3r5y_A 104 VVARELAGPERA 115 (147)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEEECCchHHH
Confidence 778888877554
No 48
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=96.33 E-value=0.0077 Score=49.99 Aligned_cols=71 Identities=14% Similarity=-0.033 Sum_probs=51.5
Q ss_pred CeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCC-c----hhhhhhhcCCceEEEEEcCCCCCccccEEEEE
Q 025535 153 RFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPL-A----IHTRNLLADPRCTLVVQIPGWSGLSNARVTIF 227 (251)
Q Consensus 153 ~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~l-A----~HTrNL~aDPRVSLtV~e~e~dp~a~aRVTL~ 227 (251)
...+|.|.. ++.|.|+.+++.|..++ |..++..|.. + .=.+||+++|+|.|.+... ++.
T Consensus 38 p~~lLtt~G-----RkSG~~r~tPl~~~~~~-~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~----------~~~ 101 (145)
T 3r5z_A 38 PVVVLTTKG-----AKTGKLRKTPLMRVEHN-GEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGTE----------VGD 101 (145)
T ss_dssp EEEEEEEEC-----TTTCCEEEEEEECEEET-TEEEEECCBTTBSSCCHHHHHHHHCCEEEEEETTE----------EEE
T ss_pred eEEEEEEcC-----CCCCCEEEEEEEEEEEC-CEEEEEEcCCCCCCCChHHHHhhhCCcEEEEECCE----------EEE
Confidence 467888886 57899999999999874 4555554532 2 4478999999998876322 356
Q ss_pred EEEEeCCCchHH
Q 025535 228 GDIFPLPEHQQV 239 (251)
Q Consensus 228 G~a~~Vedeeee 239 (251)
++++.++++|.+
T Consensus 102 ~~Ar~~~~~Er~ 113 (145)
T 3r5z_A 102 YTAREVTGEEKR 113 (145)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEEECCchHHH
Confidence 678888877554
No 49
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=54.06 E-value=15 Score=30.19 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=46.2
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE----ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA----PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa----~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
..++++.+|-....+++.|.+ .+|.|.+-++.+. .++ -.+.|++...+.-..||++..+.++.|...+
T Consensus 7 ~~~~~~~~l~p~pV~vVTt~~------~~g~~n~~t~s~~~~vs~~P-Plv~v~i~~~~~t~~~i~~~g~F~Vnvl~~~ 78 (186)
T 3e4v_A 7 PPENAYRILESGPIVLVSTRG------ADGRANLMTMGFHMMMQHEP-PLVGAIIGPWDYSHQALSETGECVLAVPTVD 78 (186)
T ss_dssp CGGGGHHHHTTCCCEEEEEEC------TTSCEEEEEECCEEEEETTT-TEEEEECCTTSTHHHHHHHHCEEEEEECCGG
T ss_pred CHHHhccccCCCceEEEEEeC------CCCceEEEEhhhhhhhcCCC-CEEEEEEcChhHHHHHHHHCCeEEEEeCCHH
Confidence 345678888888889999976 3666665544433 232 1234555565555689999999999887664
No 50
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=52.56 E-value=26 Score=30.40 Aligned_cols=54 Identities=11% Similarity=-0.051 Sum_probs=39.4
Q ss_pred eEEEEeecCCcCCCCCCcceeEEEeeEECCCC-CeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 154 FAHLCTVMSRMHHRREGYPFGSLVDFAPDSMG-HPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 154 ~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG-~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
-.+++|++ .+|.+-..++.|... ++ .+++.+.......+||++.+.+.+-|..+
T Consensus 37 e~vVtT~~------~dG~~NlAP~s~~~~-~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~d 91 (233)
T 2ptf_A 37 ETIVVTWD------DSMVGNAAPIGVLCT-GDDTVTLYLYQGTRTVENVLNNGRFTVNVTLD 91 (233)
T ss_dssp EEEEEEEC------TTCCEEEEEEEEEEC-SSSEEEEEEETTCHHHHHHHHHSEEEEEECCC
T ss_pred EEEEEEeC------CCCCEeeccEEEEEc-CCCCEEEEEcCCChHHHHHHhCCEEEEEECCH
Confidence 45577787 589999998888765 34 45555554444568999999999998863
No 51
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=40.57 E-value=7.6 Score=31.99 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=44.5
Q ss_pred cHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeE----ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 141 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFA----PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 141 ~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa----~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
..+..|.++....++++.|.+ .+|.|.+.++.+. .++ -.+.|++...+.-.+||++..+.++.|...+
T Consensus 16 ~~~~~~~~l~p~~V~vVTt~~------~~g~~n~~t~s~~~~vs~~P-p~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 16 PVESAHRILTPRPTVMVTTVD------EEGNINAAPFSFTMPVSIDP-PVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp CGGGGGGTSCCEECEEEEEEC------TTCCEEEEEECSEEEEETTT-TEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred CHHHheeeccCcceEEEEEEC------CCCCeEEEEhhccchhcCCC-CEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 345567777756677888876 2555555555433 333 2345666666666789999999999887663
No 52
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=39.43 E-value=33 Score=28.42 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhh----CCeEEEEeecCCcCCCCCCcceeEEEee----EECCCCCeEE--EecC---CchhhhhhhcCCc
Q 025535 140 RPALAVRNLMEQ----ARFAHLCTVMSRMHHRREGYPFGSLVDF----APDSMGHPIF--SFSP---LAIHTRNLLADPR 206 (251)
Q Consensus 140 ~~ae~AR~LL~~----a~~gvLATls~~~~~~~DG~P~gS~V~F----a~D~dG~pif--~vS~---lA~HTrNL~aDPR 206 (251)
........||.. ...++++|.+ .+|.|.+.++.+ ..++ |++ ++.. .+.-.+||++..+
T Consensus 12 ~~~~~~y~ll~~~~~P~pV~vVtt~~------~~G~~n~~t~s~~~~vs~~P---Plv~v~i~~~~~~~~T~~~i~~~g~ 82 (203)
T 3fge_A 12 LETRTRAHFINSLSGFKSANLIGTQD------RQGNTNLSIVSSVIHLGANP---PLMGMIIRPHSVPRHTFENIMQTGL 82 (203)
T ss_dssp SCHHHHHHHHHHTTCCEECEEEEEEC------TTCCEEEEEESCCEEEEETT---EEEEEEECC---CHHHHHHHHHHCE
T ss_pred CCHHHHHHHHhcccCccccEEEEEeC------CCCceeEEEeeeeehhcCCC---CEEEEEeCCCCCccHHHHHHHHCCc
Confidence 345566777765 4578888886 356665544443 3342 444 4444 3444579999999
Q ss_pred eEEEEEcCC
Q 025535 207 CTLVVQIPG 215 (251)
Q Consensus 207 VSLtV~e~e 215 (251)
.+|.|...+
T Consensus 83 F~Vnvl~~~ 91 (203)
T 3fge_A 83 YTINHVNQS 91 (203)
T ss_dssp EEEEECBTT
T ss_pred EEEEECCHH
Confidence 999887664
No 53
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=36.73 E-value=82 Score=26.54 Aligned_cols=55 Identities=9% Similarity=-0.191 Sum_probs=38.9
Q ss_pred eEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEe-cCCchhhhhhhcCCceEEEEEcC
Q 025535 154 FAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSF-SPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 154 ~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~v-S~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
...+.|++ .+|.+...++.|..-.+..+++.+ .......+||++.+.+.+-|..+
T Consensus 16 ev~VtT~~------~~G~~N~AP~s~~~~~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~~d 71 (199)
T 2iml_A 16 EIIAITEN------EDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVTDD 71 (199)
T ss_dssp EEEEEEEC------TTSCEEEEEEEEEESCTTSSEEEEECCSSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEEcC------CCCCEEeccEEEEEcCCCCEEEEEcCCCChHHHHHHHCCEEEEEECCH
Confidence 34567776 489999888887764221466666 44445568999999999988753
No 54
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=30.54 E-value=95 Score=24.43 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=44.0
Q ss_pred HHHHHHHHhhCCeE--EEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 142 ALAVRNLMEQARFA--HLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 142 ae~AR~LL~~a~~g--vLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
.+..|+.+..-..+ ++.|... ++..|.+..+......++- .+.|++...+.-..||++..+.++.|...+
T Consensus 5 ~~~~r~a~~~~~~~V~vVtt~~~---g~~ng~t~s~~~~vs~~Pp-~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 76 (158)
T 2r0x_A 5 VSQFKDAMAQLASAVHIVTTSGE---TGQHGFTASAVCSVTDSPP-TLLVCINSNARAYEHFVKNRVLMVNTLTAE 76 (158)
T ss_dssp HHHHHHHHHTSCEECEEEEEECS---SCEEEEEESCEEEEEETTE-EEEEEEETTSTTHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHHHhcCCCceEEEEEccC---CeEEEEEEeeEeEeECCCC-EEEEEeCCCChHHHHHHhCCEEEEEeCCHH
Confidence 45677887777665 4555541 2344455555444445541 234566666666789999999999987765
No 55
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=29.84 E-value=56 Score=27.48 Aligned_cols=54 Identities=13% Similarity=-0.015 Sum_probs=32.7
Q ss_pred EEEEeecCCcCCCCCCcceeEEEeeEE------CCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 155 AHLCTVMSRMHHRREGYPFGSLVDFAP------DSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 155 gvLATls~~~~~~~DG~P~gS~V~Fa~------D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
.++.|.+ .+|.+-..++.|.. ..+..+++.+...+.-.+||++.+.+.+-|..+
T Consensus 7 ~vVTT~~------~~G~~N~AP~g~~~~~~~Svs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~~~ 66 (205)
T 3b5m_A 7 SLVTTLD------EQGRINLAPLGPIVLPPQSPGGLPQFLLRPYEGSTTCDNLLASGNAVIHVIDD 66 (205)
T ss_dssp EEEEEEC------TTCCEEEEEECCEEECCSSTTCCCEEEECCCTTSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEcC------CCCCEeecceEEEEeccccccCCCcEEEEECCCCchHHHHHHCCEEEEEECCH
Confidence 5678887 46765555444442 112222333334445568999999999998754
No 56
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=27.41 E-value=54 Score=26.95 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=46.6
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
+......|+.+..-..+++-|... .++..|.|..+......++ =.+.|++...+.-..||++..+.+|.|...+
T Consensus 17 ~~~~~~fr~a~~~~~~gVvVTt~~--~g~~~g~t~ss~~svS~~P-Plv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 17 PKDRVQLRRVFGDFPTGVTVVTVG--GSEPRGMTANSFTSVSLSP-PLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp TTCHHHHHHHHTTSCBCCEEEEEC--SSSCEEEEESCCEEEETTT-TEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred CCCHHHHHHHHhhCCCcEEEEEcC--CCEEEEEEEeeEeeeECCC-CEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 456778888888776666444431 1233344444443333443 2345666676666789999999999987775
No 57
>3hmz_A Flavin reductase domain protein, FMN-binding; FMN-binding domain of flavin reductases-like enzyme, structu genomics; HET: MSE FMN; 1.50A {Shewanella baltica}
Probab=26.10 E-value=28 Score=28.92 Aligned_cols=69 Identities=4% Similarity=-0.064 Sum_probs=44.1
Q ss_pred CCcHHHHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEe----eEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 139 PRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVD----FAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~----Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
+...+.+..+|.....++++|-. +|.|.+-++. ...++- .+.|++...+.-.+||++..+.+|.|...
T Consensus 16 ~~~~~~~~~~l~p~pV~vVTt~~-------~g~~ng~t~s~~~~vs~~PP-~v~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 87 (199)
T 3hmz_A 16 AVELAKAYRLLNHGPTVLVSARS-------QGIDNVMAAAWCCALDFAPP-KLTVVLDKMTKTREFIEQSGMFVIQVPTV 87 (199)
T ss_dssp ECCGGGGGGGTTTCCCEEEEEEE-------TTEEEEEEESCEEEEEETTE-EEEEECCTTCHHHHHHHHHSEEEEEECBG
T ss_pred hCCHHHhccccCCCCEEEEEeCC-------CCcceEEEeeeeceecCCCC-EEEEEECCcchHHHHHHHCCEEEEEECCH
Confidence 34455667777777788888843 5555554444 334431 23455555555568999999999988755
Q ss_pred C
Q 025535 215 G 215 (251)
Q Consensus 215 e 215 (251)
+
T Consensus 88 ~ 88 (199)
T 3hmz_A 88 A 88 (199)
T ss_dssp G
T ss_pred H
Confidence 3
No 58
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=25.61 E-value=91 Score=24.41 Aligned_cols=65 Identities=11% Similarity=-0.029 Sum_probs=41.9
Q ss_pred HHHHHHHhhCCeE--EEEeecCCcCCCCCCcceeEEEee----EECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 143 LAVRNLMEQARFA--HLCTVMSRMHHRREGYPFGSLVDF----APDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 143 e~AR~LL~~a~~g--vLATls~~~~~~~DG~P~gS~V~F----a~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
+..|+.+..-..+ ++.|.. +|.|.+-.+.+ ..++- .+.|++...+.-..||++..+.++.|...+
T Consensus 3 ~~~r~a~~~~~~~V~vVtt~~-------~g~~ng~t~s~~~~vs~~Pp-~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 3 EAFKEALARFASGVTVVAARL-------GEEERGMTATAFMSLSLEPP-LVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp HHHHHHHHTSCEECEEEEEEE-------TTEEEEEEESCEEEEETTTT-EEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred HHHHHHHHhCCCeeEEEEEcc-------CCeeEEEEEEeeecccCCCC-EEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 3566777766655 555554 45555554443 34432 245666666666789999999999987776
No 59
>2d9r_A Conserved hypothetical protein; MCSG, structural genomics, hypothe protein, PSI, protein structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: b.129.2.1
Probab=25.49 E-value=2e+02 Score=22.04 Aligned_cols=59 Identities=12% Similarity=0.171 Sum_probs=43.6
Q ss_pred HHHHHHhhCCeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEE
Q 025535 144 AVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQ 212 (251)
Q Consensus 144 ~AR~LL~~a~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~ 212 (251)
.+++.+...+.-|-+|+ ||+||-+ ....+.+|..++.++..-++.-++...-.|.+.+.
T Consensus 44 ~i~e~~G~G~v~V~~tI--------~g~~~~t--sL~p~g~G~~~Lpvk~~vRka~g~~~GD~V~V~L~ 102 (104)
T 2d9r_A 44 DVKTVYGKGRVRVNATF--------DGYPYTG--YIVRMGLPCHILGLRQDIRRAIGKQPGDSVYVTLL 102 (104)
T ss_dssp CHHHHHCSSCEEEEEEE--------TTEEEEE--EEEESSTTCEEEEECHHHHHHHTCCTTSEEEEEEE
T ss_pred HHHHhcCCCceEEEEEE--------CCEEEEE--EEEECCCCcEEEEecHHHHHHcCCCCCCEEEEEEE
Confidence 35555556777888888 5999988 55556568888888887777777877777777663
No 60
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=24.62 E-value=1.2e+02 Score=25.54 Aligned_cols=54 Identities=11% Similarity=-0.015 Sum_probs=40.0
Q ss_pred CeEEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcC
Q 025535 153 RFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIP 214 (251)
Q Consensus 153 ~~gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~ 214 (251)
-..+|.|.+ .+ .|...++..... ++.+++.+...+...+||++.+.+.+-|..+
T Consensus 30 i~~vI~Tt~------~~-~~N~APiG~~~~-~~~v~i~~~~~s~T~eNI~~~~~fvvNv~~D 83 (213)
T 2nr4_A 30 ISEIIASTG------FE-HPNAAPIGIVMK-GERPFVRLFKGSHTWENVLKEKCLASNVVYD 83 (213)
T ss_dssp EEEEEEEEC------SS-SCEEEEEEEEES-SSSCEEEEETTSHHHHHHHHHCEEEEECCCC
T ss_pred ceEEEEEec------CC-CccccceEEEEe-CCEEEEEECCCCchHHHHhhCCEEEEEeCCC
Confidence 346688886 36 777777766664 3457777777777779999999999998753
No 61
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=24.44 E-value=2e+02 Score=22.29 Aligned_cols=65 Identities=6% Similarity=-0.071 Sum_probs=41.5
Q ss_pred HHHHHHHhhCC--eEEEEeecCCcCCCCCCcceeEEEeeE----ECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 143 LAVRNLMEQAR--FAHLCTVMSRMHHRREGYPFGSLVDFA----PDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 143 e~AR~LL~~a~--~gvLATls~~~~~~~DG~P~gS~V~Fa----~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
+..|+.+..-. ++++.|.. +|.|.+-++.+. .++ -.+.|++...+.-..||++..+.++.|...+
T Consensus 4 ~~~r~a~~~~~~~V~vVtt~~-------~g~~n~~t~s~~~~vs~~P-p~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (159)
T 1yoa_A 4 EAKKKVLRSFTYGLYVLTAKD-------GDEVAAGTVNWVTQASFQP-PLVAVGLKRDSHLHALVERTGKLALMTLAHD 74 (159)
T ss_dssp HHHHHHHTTCCCBCEEEEEEE-------TTEEEEEEECCEEEEETTT-TEEEEEEESSSHHHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHHHcCCCccEEEEEcc-------CCEEEEEEEeeeeeeEcCC-CEEEEEECCCCchHHHHHhCCeEEEEECchh
Confidence 45666666544 45666654 455555555444 443 2355666666666789999999999987775
No 62
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=22.91 E-value=1.9e+02 Score=26.04 Aligned_cols=70 Identities=11% Similarity=0.064 Sum_probs=47.3
Q ss_pred CCcHHHHHHHHhhCCeE--EEEeecCCcCCCCCCcceeEEEee----EECCCCCeEEEecCCchhhhhhhcCCceEEEEE
Q 025535 139 PRPALAVRNLMEQARFA--HLCTVMSRMHHRREGYPFGSLVDF----APDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQ 212 (251)
Q Consensus 139 ~~~ae~AR~LL~~a~~g--vLATls~~~~~~~DG~P~gS~V~F----a~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~ 212 (251)
+......|+.+..-..+ ++.|.+ .+|.|.+-.+.+ ..++- .+.|++...+.-..||++..+.++.|.
T Consensus 15 ~~d~~~fr~am~~~~~gV~vVTt~~------~~G~~ngmt~ss~~svS~~PP-lv~v~i~~~s~T~~~i~~sg~F~VnvL 87 (321)
T 3rh7_A 15 VFDPRALRDAFGAFATGVTVVTASD------AAGKPIGFTANSFTSVSLDPP-LLLVCLAKSSRNYESMTSAGRFAINVL 87 (321)
T ss_dssp CSCHHHHHHHHTTSCEECEEEEEEC------TTCCEEEEEECCEEEEETTTT-EEEEEEETTCSSHHHHHHCSEEEEEEC
T ss_pred CCCHHHHHHHHHhCCCCeEEEEEEc------CCCCEEEEEecchhhhcCCCC-EEEEEECCcchHHHHHHhCCeEEEEEC
Confidence 45677889998888776 466665 356665544443 33431 245666666666789999999999987
Q ss_pred cCC
Q 025535 213 IPG 215 (251)
Q Consensus 213 e~e 215 (251)
..+
T Consensus 88 ~~~ 90 (321)
T 3rh7_A 88 SET 90 (321)
T ss_dssp BTT
T ss_pred CHH
Confidence 765
No 63
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=20.98 E-value=1.6e+02 Score=23.24 Aligned_cols=66 Identities=11% Similarity=0.058 Sum_probs=43.6
Q ss_pred HHHHHHHHhhCCe--EEEEeecCCcCCCCCCcceeEEEee----EECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 142 ALAVRNLMEQARF--AHLCTVMSRMHHRREGYPFGSLVDF----APDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 142 ae~AR~LL~~a~~--gvLATls~~~~~~~DG~P~gS~V~F----a~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
.+..|+.+..-.. +++.|.+ +|.|.+-.+.+ ..++- .+.|++...+.-..||++..+.++.|...+
T Consensus 4 ~~~fr~a~~~~p~~V~vVTt~~-------~g~~~g~t~s~~~svs~~PP-~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 4 PTSLREAFGHFPSGVIAIAAEV-------DGTRVGLAASTFVPVSLEPP-LVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp HHHHHHHHHTSCBCCEEEEEEE-------TTEEEEEEESCCEEEETTTT-EEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred HHHHHHHHHhCCCceEEEEEee-------CCEEEEEEeeeEeEEECCCc-EEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 4566777766554 4566665 56666555543 33432 355666677777789999999999987765
No 64
>3cb0_A 4-hydroxyphenylacetate 3-monooxygenase; corrin reductase, COBR, six-stranded anti-parallel beta- barrel, oxidoreductase; HET: FMN; 1.60A {Brucella melitensis}
Probab=20.16 E-value=2e+02 Score=22.90 Aligned_cols=72 Identities=10% Similarity=0.076 Sum_probs=43.1
Q ss_pred CcHHHHHHHHhhCCe--EEEEeecCCcCCCCCCcceeEEEeeEECCCCCeEEEecCCchhhhhhhcCCceEEEEEcCC
Q 025535 140 RPALAVRNLMEQARF--AHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPG 215 (251)
Q Consensus 140 ~~ae~AR~LL~~a~~--gvLATls~~~~~~~DG~P~gS~V~Fa~D~dG~pif~vS~lA~HTrNL~aDPRVSLtV~e~e 215 (251)
...+..|+.+..-.. .++.|.+. +...|.+..+......++ -.+.|++...+.-.+||++..+.+|.|...+
T Consensus 14 ~~~~~~r~~~~~~~~~V~vVTt~~~---~~~~g~t~ss~~~vs~~P-p~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 87 (173)
T 3cb0_A 14 VESKAYRDAMSHYAGAVQIVTTAGA---AGRRGLTLTAACSVSDNP-PTILICLQKIHEENRIFIENGVFAINTLAGP 87 (173)
T ss_dssp CCHHHHHHHHTTSCEECEEEEECST---TCCEEEEECCEEEEEETT-EEEEEEEESSSGGGHHHHHHTEEEEEECBGG
T ss_pred CCHHHHHHHHhhCCCceEEEEEccC---CCceeEEEEEEeeeECCC-CEEEEEeCCCchHHHHHhhCCEEEEEeCCHH
Confidence 456778888877664 45666552 112333333333333443 1244666666666689999999999887663
Done!