BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025536
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q505I4|CO040_RAT UPF0235 protein C15orf40 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 126
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 161 GLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQMTL 220
G V +AI + ++++A+T +N + V V +AAP + GEAN EL ++ KVL LR S + L
Sbjct: 34 GFVTIAIHAKPGSKQNAVTDLNTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVL 93
Query: 221 QRGWNNKSKLL-VVEDLSARQVYEKL 245
+G ++ K++ ++ + +V EKL
Sbjct: 94 DKGGKSREKVVKLLASTTPEEVLEKL 119
>sp|Q3ZBP8|CO040_BOVIN UPF0235 protein C15orf40 homolog OS=Bos taurus PE=2 SV=1
Length = 126
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 150 PVPPCISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGK 209
P+ P +GG V +AI + ++++A+T V + V V +AAP GEAN EL ++ K
Sbjct: 24 PLGPVTVDPKGG-VSIAIHAKPGSKQNAVTDVTTEAVSVAIAAPPTEGEANAELCRYLSK 82
Query: 210 VLSLRLSQMTLQRGWNNKSKLL-VVEDLSARQVYEKLLEAVQ 250
VL LR S + L +G ++ K++ ++ ++ EKL + V+
Sbjct: 83 VLELRKSDVVLDKGGKSREKVVKLLASTPPEEILEKLKKQVE 124
>sp|Q8WUR7|CO040_HUMAN UPF0235 protein C15orf40 OS=Homo sapiens GN=C15orf40 PE=1 SV=1
Length = 126
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 135 GALSTVAAETNPQDAPVPPC--ISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAA 192
GA + +++ + P+PP ++ G V +AI + ++++A+T + A+ V V +AA
Sbjct: 6 GATTKGKSQSKEPERPLPPLGPVAVDPKGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAA 65
Query: 193 PAARGEANNELLEFMGKVLSLRLSQMTLQRGWNNKSKLL 231
P + GEAN EL ++ KVL LR S + L +G ++ K++
Sbjct: 66 PPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVV 104
>sp|Q9CRC3|CO040_MOUSE UPF0235 protein C15orf40 homolog OS=Mus musculus PE=2 SV=1
Length = 126
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 161 GLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQMTL 220
G V +AI + ++++A+T ++ + V V +AAP + GEAN EL ++ KVL LR S + L
Sbjct: 34 GFVTIAIHAKPGSRQNAVTDLSTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVL 93
Query: 221 QRGWNNKSKLL-VVEDLSARQVYEKL 245
+G ++ K++ ++ + +V EKL
Sbjct: 94 DKGGKSREKVVKLLASTTPEEVLEKL 119
>sp|Q66I61|CX056_DANRE UPF0428 protein CXorf56 homolog OS=Danio rerio GN=zgc:103697 PE=2
SV=1
Length = 224
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R DKA V+D KH + N++E V L+R EG +E+Q+R C CGL + Y+ +
Sbjct: 47 KLPMRPRDKARVIDAAKHAHKFCNVEEDEAVYLKRSEG-IERQYRKKCGKCGLLLFYQHQ 105
Query: 122 ETLEVASFIYVVDGAL 137
++ ++VDGAL
Sbjct: 106 --MKSTQTTFIVDGAL 119
>sp|Q3A6Y1|Y617_PELCD UPF0235 protein Pcar_0617 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=Pcar_0617 PE=3 SV=1
Length = 95
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
C+SQ + G+V +++ V+ RA R+ + + + +++ + +P G AN EF+ K+L +
Sbjct: 4 CLSQTDKGVV-LSVHVQPRASRNELAGLQGESLKIRLTSPPVEGAANKLCREFLAKLLGV 62
Query: 214 RLSQMTLQRGWNNKSKLLVVEDLSARQVYEKLL 246
S++TL G ++ K L++E ++ +V KLL
Sbjct: 63 AKSRVTLVSGDKSRHKRLLIEGVTLDEVRNKLL 95
>sp|B4THI7|YGGU_SALHS UPF0235 protein YggU OS=Salmonella heidelberg (strain SL476)
GN=yggU PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 155 ISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLR 214
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 4 VTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRVA 62
Query: 215 LSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 63 KSQIVIEKGELGRHK 77
>sp|B5F5M7|YGGU_SALA4 UPF0235 protein YggU OS=Salmonella agona (strain SL483) GN=yggU
PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 155 ISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLR 214
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 4 VTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRVA 62
Query: 215 LSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 63 KSQIVIEKGELGRHK 77
>sp|B5BFQ9|YGGU_SALPK UPF0235 protein YggU OS=Salmonella paratyphi A (strain AKU_12601)
GN=yggU PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|Q5PML0|YGGU_SALPA UPF0235 protein YggU OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=yggU PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|B4T5K9|YGGU_SALNS UPF0235 protein YggU OS=Salmonella newport (strain SL254) GN=yggU
PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLIKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|Q6P338|CX056_XENTR UPF0428 protein CXorf56 homolog OS=Xenopus tropicalis
GN=TNeu084h20.1 PE=2 SV=1
Length = 222
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R DKA V+D KH + N +E V LRR +G +E+Q+R C C L + Y+
Sbjct: 47 KLPMRPRDKARVIDAAKHAHKFCNTEEEEPVYLRRPDG-IERQYRKKCSKCSLLLFYQHS 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A+FI V+GAL
Sbjct: 106 QKNVAATFI--VNGAL 119
>sp|A9MQS2|YGGU_SALAR UPF0235 protein YggU OS=Salmonella arizonae (strain ATCC BAA-731 /
CDC346-86 / RSK2980) GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 155 ISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLR 214
+++ E GLV + + ++ +A R I ++ D+V+V + AP G+AN+ L++F+GK +
Sbjct: 4 VTRCEDGLV-LRLYIQPKASRDCIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVA 62
Query: 215 LSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 63 KSQVAIEKGELGRHK 77
>sp|Q3T197|CX056_BOVIN UPF0428 protein CXorf56 homolog OS=Bos taurus PE=2 SV=1
Length = 222
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R D++ V+D KH + N ++ + LRR EG +E+Q+R C CGL + Y+S+
Sbjct: 47 KLPMRPRDRSRVIDGAKHAHKFCNTEDEETIYLRRPEG-IERQYRKKCAKCGLPLFYQSQ 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A ++VDGA+
Sbjct: 106 P--KNAPVTFIVDGAV 119
>sp|Q8Z3U7|YGGU_SALTI UPF0235 protein YggU OS=Salmonella typhi GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|B4TV71|YGGU_SALSV UPF0235 protein YggU OS=Salmonella schwarzengrund (strain CVM19633)
GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|A9N4P8|YGGU_SALPB UPF0235 protein YggU OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|B5RE62|YGGU_SALG2 UPF0235 protein YggU OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|B5QY78|YGGU_SALEP UPF0235 protein YggU OS=Salmonella enteritidis PT4 (strain P125109)
GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|B5FUW5|YGGU_SALDC UPF0235 protein YggU OS=Salmonella dublin (strain CT_02021853)
GN=yggU PE=3 SV=1
Length = 96
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|Q9H5V9|CX056_HUMAN UPF0428 protein CXorf56 OS=Homo sapiens GN=CXorf56 PE=1 SV=1
Length = 222
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R D++ V+D KH + N ++ + LRR EG +E+Q+R C CGL + Y+S+
Sbjct: 47 KLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG-IERQYRKKCAKCGLPLFYQSQ 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A ++VDGA+
Sbjct: 106 P--KNAPVTFIVDGAV 119
>sp|Q8ZM46|YGGU_SALTY UPF0235 protein YggU OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=yggU PE=3 SV=1
Length = 96
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 154 CISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSL 213
+++ E GLV + + ++ +A R +I ++ D+V++ + AP G+AN+ L +F+GK +
Sbjct: 3 AVTRCEDGLV-LRLYIQPKASRDSIVGLHGDEVKIAITAPPVDGQANSHLTKFLGKQFRV 61
Query: 214 RLSQMTLQRGWNNKSK 229
SQ+ +++G + K
Sbjct: 62 AKSQIVIEKGELGRHK 77
>sp|Q8VDP2|CX056_MOUSE UPF0428 protein CXorf56 homolog OS=Mus musculus PE=2 SV=1
Length = 222
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R D++ V+D KH + N ++ LRR EG +E+Q+R C CGL + Y+S+
Sbjct: 47 KLPMRPRDRSRVIDAAKHAHKFCNTEDEETTYLRRPEG-IERQYRKKCAKCGLPLFYQSQ 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A ++VDGA+
Sbjct: 106 P--KNAPVTFIVDGAV 119
>sp|B0TGP1|Y2027_HELMI UPF0235 protein Helmi_20270 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=Helmi_20270 PE=3 SV=1
Length = 96
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 155 ISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLR 214
I + GG ++ I V+ RA ++ + + D ++V + AP GEAN L+F+ K L L
Sbjct: 4 IQEQPGGSIRFRIRVQPRASKNEVCGLLDDALKVRLTAPPVDGEANAACLQFIAKTLGLS 63
Query: 215 LSQMTLQRGWNNKSKLLVVEDLSARQVYEKL 245
SQ+ L G ++ K L VE +SA + ++
Sbjct: 64 RSQVRLVAGETSRLKTLEVEGVSAEDLRKRF 94
>sp|A8APH3|Y4329_CITK8 UPF0235 protein CKO_04329 OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=CKO_04329 PE=3 SV=1
Length = 96
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 151 VPPCISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKV 210
V PC GL+ + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK
Sbjct: 4 VTPCAD----GLI-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQ 58
Query: 211 LSLRLSQMTLQRGWNNKSK 229
+ SQ+ +++G + K
Sbjct: 59 FRVAKSQVVIEKGELGRHK 77
>sp|Q5U515|CX056_XENLA UPF0428 protein CXorf56 homolog OS=Xenopus laevis PE=2 SV=1
Length = 222
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R D+A V+ KH + N +E V LRR +G +E+Q+R C C L + Y+
Sbjct: 47 KLPMRPRDRARVIGAAKHAHKFCNTEEEEPVYLRRSDG-IERQYRKKCSKCSLLLFYQHS 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A+FI V+GAL
Sbjct: 106 QKNAAATFI--VNGAL 119
>sp|B7UI00|YGGU_ECO27 UPF0235 protein YggU OS=Escherichia coli O127:H6 (strain E2348/69 /
EPEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|Q83JS1|YGGU_SHIFL UPF0235 protein YggU OS=Shigella flexneri GN=yggU PE=3 SV=2
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7LPS0|YGGU_ESCF3 UPF0235 protein YggU OS=Escherichia fergusonii (strain ATCC 35469 /
DSM 13698 / CDC 0568-73) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B1LDG2|YGGU_ECOSM UPF0235 protein YggU OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B6I789|YGGU_ECOSE UPF0235 protein YggU OS=Escherichia coli (strain SE11) GN=yggU PE=3
SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7N7K6|YGGU_ECOLU UPF0235 protein YggU OS=Escherichia coli O17:K52:H18 (strain UMN026
/ ExPEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B1IT54|YGGU_ECOLC UPF0235 protein YggU OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|Q8FE28|YGGU_ECOL6 UPF0235 protein YggU OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yggU PE=3 SV=2
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|Q0TDP8|YGGU_ECOL5 UPF0235 protein YggU OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|A1AFD9|YGGU_ECOK1 UPF0235 protein YggU OS=Escherichia coli O1:K1 / APEC GN=yggU PE=3
SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7LYY3|YGGU_ECO8A UPF0235 protein YggU OS=Escherichia coli O8 (strain IAI1) GN=yggU
PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7MZQ2|YGGU_ECO81 UPF0235 protein YggU OS=Escherichia coli O81 (strain ED1a) GN=yggU
PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7NI16|YGGU_ECO7I UPF0235 protein YggU OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7LFL6|YGGU_ECO55 UPF0235 protein YggU OS=Escherichia coli (strain 55989 / EAEC)
GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B7MME1|YGGU_ECO45 UPF0235 protein YggU OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B5YQF1|YGGU_ECO5E UPF0235 protein YggU OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|Q8XCU6|YGGU_ECO57 UPF0235 protein YggU OS=Escherichia coli O157:H7 GN=yggU PE=1 SV=2
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|P52060|YGGU_ECOLI UPF0235 protein YggU OS=Escherichia coli (strain K12) GN=yggU PE=3
SV=2
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|B1XFB3|YGGU_ECODH UPF0235 protein YggU OS=Escherichia coli (strain K12 / DH10B)
GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|C5A0M2|YGGU_ECOBW UPF0235 protein YggU OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=yggU PE=3 SV=1
Length = 96
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 159 EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQM 218
+ GLV + + ++ +A R +I ++ D+V+V + AP G+AN+ L++F+GK + SQ+
Sbjct: 8 DDGLV-LRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQV 66
Query: 219 TLQRG 223
+++G
Sbjct: 67 VIEKG 71
>sp|A0LDU6|Y3654_MAGSM UPF0235 protein Mmc1_3654 OS=Magnetococcus sp. (strain MC-1)
GN=Mmc1_3654 PE=3 SV=1
Length = 98
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 158 LEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQ 217
+G + + I V+ +A + + + ++V + AP G AN L F+ K L + Q
Sbjct: 6 WQGDTLHLTIRVQPKAAQERVMGWQGEQLKVALNAPPVDGAANKALCHFLAKQLGIAKGQ 65
Query: 218 MTLQRGWNNKSKLLVVEDLSARQVYEKLLE 247
+TL RG ++ K LV++ +S ++++ LE
Sbjct: 66 VTLVRGEKSREKQLVIQGISPS-IWQQFLE 94
>sp|Q5RAT0|CX056_PONAB UPF0428 protein CXorf56 homolog OS=Pongo abelii PE=2 SV=1
Length = 222
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 63 KMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSE 121
K+P R D++ V+D KH + N ++ + LRR EG +E+Q+ C CGL + Y+S+
Sbjct: 47 KLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG-IERQYGKKCAKCGLPLFYQSQ 105
Query: 122 ETLEVASFIYVVDGAL 137
+ A ++VDGA+
Sbjct: 106 P--KNAPVTFIVDGAV 119
>sp|Q2NRC0|Y2030_SODGM UPF0235 protein SG2030 OS=Sodalis glossinidius (strain morsitans)
GN=SG2030 PE=3 SV=1
Length = 101
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 151 VPPCISQL-EGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGK 209
V P I EG ++ + + ++ RA R I + D+++V + AP G+AN+ L+ F+ K
Sbjct: 2 VSPVIDVWREGDVLVLRLYIQPRASRDHIAGAHGDEIKVAITAPPVDGQANSHLIRFLAK 61
Query: 210 VLSLRLSQMTLQRGWNNKSKLLVVE 234
+ S++ L++G + K L ++
Sbjct: 62 EFGVAKSRVILEKGELGRHKQLRID 86
>sp|Q5JHB2|Y768_PYRKO UPF0235 protein TK0768 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=TK0768 PE=3 SV=1
Length = 94
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 163 VQVAIEVEDRAQRSAITRVNA--DDVRVTVAAPAARGEANNELLEFMGKVLSLRLSQMTL 220
V + I V+ +A+++AI V+ ++V +AAP G+AN E+++F K+L +++ +
Sbjct: 11 VLIMIYVQPKAKKNAIEGVDGWRGRLKVRIAAPPVEGKANKEVVKFFSKLLG---AEVNI 67
Query: 221 QRGWNNKSKLLVVEDLSARQVYEKL 245
RG ++ K L+V+ LS +V +KL
Sbjct: 68 VRGETSREKDLLVKGLSVEEVRKKL 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,761,530
Number of Sequences: 539616
Number of extensions: 2807570
Number of successful extensions: 10852
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10694
Number of HSP's gapped (non-prelim): 175
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)