Query 025537
Match_columns 251
No_of_seqs 335 out of 3476
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 12:21:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 3.7E-24 1.3E-28 156.4 14.5 107 142-249 9-115 (126)
2 2hr2_A Hypothetical protein; a 99.9 5.4E-22 1.8E-26 149.1 14.0 107 143-249 8-136 (159)
3 3gyz_A Chaperone protein IPGC; 99.9 4.2E-21 1.4E-25 144.6 14.1 106 142-248 32-137 (151)
4 4gcn_A Protein STI-1; structur 99.9 4.6E-21 1.6E-25 140.0 12.5 105 143-248 5-116 (127)
5 3rkv_A Putative peptidylprolyl 99.8 1.2E-20 3.9E-25 143.1 12.7 105 144-249 9-131 (162)
6 3upv_A Heat shock protein STI1 99.8 3.5E-20 1.2E-24 134.3 14.1 102 144-246 2-103 (126)
7 4ga2_A E3 SUMO-protein ligase 99.8 5.1E-20 1.7E-24 138.3 11.2 107 142-249 27-134 (150)
8 2vgx_A Chaperone SYCD; alterna 99.8 2.1E-19 7.2E-24 134.7 14.6 106 142-248 17-122 (148)
9 3sz7_A HSC70 cochaperone (SGT) 99.8 3.9E-19 1.3E-23 134.8 14.8 105 144-249 9-113 (164)
10 2xcb_A PCRH, regulatory protei 99.8 6.3E-19 2.2E-23 130.7 14.8 106 142-248 14-119 (142)
11 1hxi_A PEX5, peroxisome target 99.8 1.1E-18 3.9E-23 126.2 11.6 101 148-249 19-119 (121)
12 3q49_B STIP1 homology and U bo 99.8 1.1E-17 3.6E-22 122.4 14.4 103 145-248 8-110 (137)
13 4gyw_A UDP-N-acetylglucosamine 99.7 6.7E-18 2.3E-22 156.3 12.9 113 135-248 31-144 (723)
14 3urz_A Uncharacterized protein 99.7 7.2E-18 2.5E-22 133.1 11.3 102 146-248 4-121 (208)
15 1p5q_A FKBP52, FK506-binding p 99.7 2.3E-17 7.8E-22 139.9 14.8 106 142-248 143-263 (336)
16 4gyw_A UDP-N-acetylglucosamine 99.7 1.4E-17 5E-22 154.1 14.1 106 142-248 5-110 (723)
17 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 2.1E-17 7.1E-22 145.8 14.2 107 142-249 264-385 (457)
18 2fbn_A 70 kDa peptidylprolyl i 99.7 4.8E-17 1.7E-21 127.0 14.6 106 142-248 34-155 (198)
19 1elw_A TPR1-domain of HOP; HOP 99.7 8.8E-17 3E-21 113.5 13.7 103 145-248 3-105 (118)
20 2lni_A Stress-induced-phosphop 99.7 1.1E-16 3.7E-21 115.7 14.0 104 145-249 15-118 (133)
21 3vtx_A MAMA; tetratricopeptide 99.7 5.6E-17 1.9E-21 124.7 13.1 106 142-248 69-174 (184)
22 4ga2_A E3 SUMO-protein ligase 99.7 5.1E-18 1.8E-22 127.3 6.7 97 152-249 3-99 (150)
23 2c2l_A CHIP, carboxy terminus 99.7 6.3E-17 2.1E-21 133.7 13.7 103 146-249 4-106 (281)
24 2pl2_A Hypothetical conserved 99.7 3.1E-17 1.1E-21 130.3 11.3 103 145-248 4-117 (217)
25 1zu2_A Mitochondrial import re 99.7 8.4E-18 2.9E-22 126.0 7.0 91 158-249 14-125 (158)
26 2h6f_A Protein farnesyltransfe 99.7 1.8E-17 6.1E-22 142.9 9.9 106 142-248 127-233 (382)
27 1a17_A Serine/threonine protei 99.7 2.9E-16 1E-20 117.9 15.2 105 143-248 10-114 (166)
28 2dba_A Smooth muscle cell asso 99.7 1.9E-16 6.5E-21 116.7 13.6 103 146-249 28-133 (148)
29 2vyi_A SGTA protein; chaperone 99.7 4.3E-16 1.5E-20 111.8 15.1 106 142-248 8-113 (131)
30 3urz_A Uncharacterized protein 99.7 1.3E-16 4.6E-21 125.8 13.4 106 142-248 34-190 (208)
31 2xev_A YBGF; tetratricopeptide 99.7 1.6E-16 5.6E-21 114.7 12.3 100 148-248 4-109 (129)
32 2pl2_A Hypothetical conserved 99.7 1.3E-16 4.4E-21 126.7 12.0 105 142-248 69-184 (217)
33 2if4_A ATFKBP42; FKBP-like, al 99.7 5.4E-17 1.8E-21 137.7 10.4 107 142-249 175-298 (338)
34 2h6f_A Protein farnesyltransfe 99.7 1E-16 3.4E-21 138.2 12.1 106 142-248 93-199 (382)
35 2pzi_A Probable serine/threoni 99.7 1.5E-16 5.3E-21 146.7 14.1 102 145-248 466-567 (681)
36 1ihg_A Cyclophilin 40; ppiase 99.7 1.5E-16 5.2E-21 136.6 13.0 106 142-248 219-340 (370)
37 4i17_A Hypothetical protein; T 99.7 3.2E-16 1.1E-20 124.7 13.6 103 146-249 7-110 (228)
38 2kck_A TPR repeat; tetratricop 99.7 4.2E-16 1.4E-20 109.0 11.4 102 147-249 7-111 (112)
39 1elr_A TPR2A-domain of HOP; HO 99.7 5E-16 1.7E-20 111.6 11.4 103 144-247 2-111 (131)
40 3k9i_A BH0479 protein; putativ 99.7 7.6E-17 2.6E-21 115.4 6.7 90 158-248 2-94 (117)
41 3vtx_A MAMA; tetratricopeptide 99.7 1.3E-15 4.6E-20 116.9 13.8 112 136-248 28-140 (184)
42 1na0_A Designed protein CTPR3; 99.6 6.3E-15 2.1E-19 104.7 14.5 102 146-248 9-110 (125)
43 2e2e_A Formate-dependent nitri 99.6 1.7E-15 5.9E-20 115.7 11.8 107 142-249 40-149 (177)
44 4i17_A Hypothetical protein; T 99.6 3E-15 1E-19 118.9 13.6 103 144-247 40-149 (228)
45 1hh8_A P67PHOX, NCF-2, neutrop 99.6 3.8E-15 1.3E-19 116.8 14.0 102 146-248 37-154 (213)
46 1xnf_A Lipoprotein NLPI; TPR, 99.6 8.4E-15 2.9E-19 118.7 14.9 105 143-248 40-144 (275)
47 1wao_1 Serine/threonine protei 99.6 5.7E-16 1.9E-20 137.3 8.3 105 144-249 4-108 (477)
48 2l6j_A TPR repeat-containing p 99.6 2.8E-16 9.5E-21 110.4 4.7 95 145-240 3-103 (111)
49 3uq3_A Heat shock protein STI1 99.6 1.7E-14 5.8E-19 115.6 14.9 104 142-246 135-238 (258)
50 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.9E-14 6.4E-19 112.8 13.7 101 145-249 5-105 (213)
51 4gco_A Protein STI-1; structur 99.6 6.9E-15 2.4E-19 106.9 9.8 90 135-225 35-125 (126)
52 3qky_A Outer membrane assembly 99.6 1.6E-14 5.3E-19 117.3 12.7 104 145-249 14-131 (261)
53 3gyz_A Chaperone protein IPGC; 99.6 1.3E-15 4.5E-20 114.4 5.6 84 165-249 21-104 (151)
54 2pzi_A Probable serine/threoni 99.6 1.7E-15 5.7E-20 139.8 6.8 104 143-248 430-533 (681)
55 2kat_A Uncharacterized protein 99.6 2.7E-14 9.1E-19 101.5 11.6 86 163-249 2-87 (115)
56 2fo7_A Synthetic consensus TPR 99.6 1.3E-13 4.4E-18 98.9 14.2 103 145-248 34-136 (136)
57 4eqf_A PEX5-related protein; a 99.6 4.5E-14 1.5E-18 119.7 13.4 103 145-248 212-314 (365)
58 4eqf_A PEX5-related protein; a 99.6 5.4E-14 1.9E-18 119.1 13.7 103 146-249 65-167 (365)
59 2vsy_A XCC0866; transferase, g 99.5 4.4E-14 1.5E-18 127.4 13.6 105 143-248 54-161 (568)
60 3ieg_A DNAJ homolog subfamily 99.5 5.8E-14 2E-18 117.6 13.4 101 145-246 2-102 (359)
61 3as5_A MAMA; tetratricopeptide 99.5 1.4E-13 4.9E-18 104.3 14.4 106 143-249 73-178 (186)
62 2yhc_A BAMD, UPF0169 lipoprote 99.5 4.8E-14 1.6E-18 112.3 12.1 103 146-249 4-130 (225)
63 2fo7_A Synthetic consensus TPR 99.5 1.2E-13 4E-18 99.1 13.1 101 147-248 2-102 (136)
64 2kc7_A BFR218_protein; tetratr 99.5 2.6E-14 8.7E-19 98.6 8.5 91 150-249 4-95 (99)
65 2y4t_A DNAJ homolog subfamily 99.5 9E-14 3.1E-18 120.7 13.8 107 141-248 21-127 (450)
66 2gw1_A Mitochondrial precursor 99.5 1.1E-13 3.6E-18 121.9 14.4 104 143-248 3-106 (514)
67 4abn_A Tetratricopeptide repea 99.5 1.5E-14 5.2E-19 127.9 8.9 102 146-248 170-291 (474)
68 1w3b_A UDP-N-acetylglucosamine 99.5 5.7E-14 1.9E-18 120.1 11.8 99 148-247 103-201 (388)
69 2r5s_A Uncharacterized protein 99.5 4.8E-14 1.6E-18 107.9 9.9 106 141-248 35-141 (176)
70 1fch_A Peroxisomal targeting s 99.5 1.5E-13 5.1E-18 116.1 13.9 103 145-248 216-318 (368)
71 3as5_A MAMA; tetratricopeptide 99.5 3.1E-13 1.1E-17 102.4 14.0 103 145-248 41-143 (186)
72 3fp2_A TPR repeat-containing p 99.5 6.1E-14 2.1E-18 124.4 11.5 106 142-249 21-126 (537)
73 2q7f_A YRRB protein; TPR, prot 99.5 1.2E-13 4E-18 109.9 11.8 105 144-249 123-227 (243)
74 1w3b_A UDP-N-acetylglucosamine 99.5 2E-13 6.9E-18 116.6 13.8 99 148-247 273-371 (388)
75 4abn_A Tetratricopeptide repea 99.5 8.3E-14 2.8E-18 123.2 11.6 103 142-246 133-252 (474)
76 1fch_A Peroxisomal targeting s 99.5 2.9E-13 9.9E-18 114.3 14.3 103 146-249 64-166 (368)
77 3qou_A Protein YBBN; thioredox 99.5 2E-13 6.8E-18 112.9 12.9 104 144-248 115-252 (287)
78 3ma5_A Tetratricopeptide repea 99.5 1.4E-13 4.9E-18 95.6 10.1 74 175-249 2-75 (100)
79 3uq3_A Heat shock protein STI1 99.5 2.9E-13 9.9E-18 108.3 13.4 102 146-248 79-206 (258)
80 3qky_A Outer membrane assembly 99.5 2E-13 6.9E-18 110.7 11.9 103 146-248 52-181 (261)
81 2vgx_A Chaperone SYCD; alterna 99.5 3.7E-14 1.3E-18 105.8 6.9 84 165-249 6-89 (148)
82 2q7f_A YRRB protein; TPR, prot 99.5 6.6E-13 2.3E-17 105.5 14.3 105 143-248 88-192 (243)
83 1na3_A Designed protein CTPR2; 99.5 5.6E-13 1.9E-17 89.9 11.9 84 145-229 8-91 (91)
84 3u4t_A TPR repeat-containing p 99.5 1.4E-13 4.7E-18 111.6 10.3 107 142-248 33-141 (272)
85 3u4t_A TPR repeat-containing p 99.5 2.2E-13 7.6E-18 110.3 11.6 100 145-245 107-209 (272)
86 2vq2_A PILW, putative fimbrial 99.5 6.1E-13 2.1E-17 104.2 13.8 106 142-248 38-146 (225)
87 2vsy_A XCC0866; transferase, g 99.5 2.6E-13 8.8E-18 122.4 12.5 106 142-248 19-124 (568)
88 3ieg_A DNAJ homolog subfamily 99.5 1.1E-12 3.8E-17 109.7 15.5 102 147-249 235-340 (359)
89 2ho1_A Type 4 fimbrial biogene 99.5 3.7E-13 1.3E-17 107.9 12.1 101 146-247 71-173 (252)
90 3mkr_A Coatomer subunit epsilo 99.5 4E-13 1.4E-17 111.4 12.3 92 156-248 176-268 (291)
91 1p5q_A FKBP52, FK506-binding p 99.5 5.1E-13 1.7E-17 113.0 12.9 99 146-245 196-295 (336)
92 2vq2_A PILW, putative fimbrial 99.5 7E-13 2.4E-17 103.8 12.7 105 143-248 73-181 (225)
93 1qqe_A Vesicular transport pro 99.5 2.8E-13 9.7E-18 112.1 10.6 105 145-249 116-233 (292)
94 3cv0_A Peroxisome targeting si 99.5 1.2E-12 4.2E-17 108.2 14.4 104 143-247 169-272 (327)
95 2ho1_A Type 4 fimbrial biogene 99.5 9.6E-13 3.3E-17 105.4 13.3 103 145-248 140-242 (252)
96 1a17_A Serine/threonine protei 99.5 6.9E-13 2.4E-17 99.2 11.6 105 142-247 43-149 (166)
97 1xnf_A Lipoprotein NLPI; TPR, 99.5 8E-13 2.7E-17 106.9 12.7 106 142-248 73-248 (275)
98 3cv0_A Peroxisome targeting si 99.4 1.5E-12 5E-17 107.8 14.3 103 146-249 21-123 (327)
99 4gcn_A Protein STI-1; structur 99.4 6.1E-13 2.1E-17 96.5 10.3 70 180-249 7-76 (127)
100 3hym_B Cell division cycle pro 99.4 9.2E-13 3.2E-17 109.1 12.7 102 145-247 124-225 (330)
101 3hym_B Cell division cycle pro 99.4 5.3E-13 1.8E-17 110.6 10.9 106 143-249 190-304 (330)
102 2e2e_A Formate-dependent nitri 99.4 8.3E-14 2.8E-18 106.3 5.5 95 153-248 17-114 (177)
103 3fp2_A TPR repeat-containing p 99.4 2.7E-12 9.3E-17 113.7 15.3 107 142-249 306-412 (537)
104 2y4t_A DNAJ homolog subfamily 99.4 2.3E-12 8E-17 111.7 14.6 100 148-248 259-362 (450)
105 1wao_1 Serine/threonine protei 99.4 1.1E-13 3.9E-18 122.5 6.3 107 142-249 36-155 (477)
106 1qqe_A Vesicular transport pro 99.4 6.6E-13 2.3E-17 109.9 10.5 106 144-249 75-192 (292)
107 2yhc_A BAMD, UPF0169 lipoprote 99.4 9.1E-13 3.1E-17 104.8 10.7 102 146-248 41-180 (225)
108 2xcb_A PCRH, regulatory protei 99.4 3.9E-13 1.3E-17 99.2 7.3 82 167-249 5-86 (142)
109 2if4_A ATFKBP42; FKBP-like, al 99.4 8.7E-13 3E-17 111.7 8.9 102 147-249 231-333 (338)
110 3mkr_A Coatomer subunit epsilo 99.4 6E-12 2E-16 104.3 13.5 105 144-249 128-234 (291)
111 3edt_B KLC 2, kinesin light ch 99.4 3.2E-12 1.1E-16 103.3 10.9 105 143-248 82-202 (283)
112 4g1t_A Interferon-induced prot 99.4 4.1E-12 1.4E-16 111.1 12.3 102 146-248 94-208 (472)
113 3k9i_A BH0479 protein; putativ 99.4 6.3E-12 2.2E-16 89.5 10.4 89 142-231 23-111 (117)
114 2xpi_A Anaphase-promoting comp 99.3 9.6E-12 3.3E-16 111.8 13.9 105 145-249 474-584 (597)
115 3edt_B KLC 2, kinesin light ch 99.3 5E-12 1.7E-16 102.1 10.6 101 143-244 40-156 (283)
116 2gw1_A Mitochondrial precursor 99.3 4.8E-12 1.6E-16 111.3 11.0 105 144-249 370-483 (514)
117 2ond_A Cleavage stimulation fa 99.3 8.4E-12 2.9E-16 103.9 11.9 102 145-247 98-201 (308)
118 2l6j_A TPR repeat-containing p 99.3 7.3E-12 2.5E-16 87.4 9.4 69 180-248 3-71 (111)
119 3u3w_A Transcriptional activat 99.3 6.8E-12 2.3E-16 103.6 10.7 103 146-248 155-270 (293)
120 2lni_A Stress-induced-phosphop 99.3 8.9E-12 3.1E-16 89.4 10.0 88 142-230 46-133 (133)
121 3sz7_A HSC70 cochaperone (SGT) 99.3 5.4E-12 1.9E-16 95.1 9.2 85 142-227 41-125 (164)
122 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 7.8E-12 2.7E-16 110.1 11.1 91 146-237 317-407 (457)
123 2vyi_A SGTA protein; chaperone 99.3 1.1E-11 3.8E-16 88.4 9.9 89 142-231 42-130 (131)
124 2r5s_A Uncharacterized protein 99.3 1.7E-11 5.8E-16 93.6 11.5 83 160-243 88-172 (176)
125 3upv_A Heat shock protein STI1 99.3 1.1E-11 3.7E-16 89.1 9.7 86 142-228 34-125 (126)
126 3nf1_A KLC 1, kinesin light ch 99.3 1.4E-11 4.9E-16 101.0 11.4 104 143-247 150-310 (311)
127 1na3_A Designed protein CTPR2; 99.3 1.3E-11 4.5E-16 83.0 9.3 73 176-248 4-76 (91)
128 3rkv_A Putative peptidylprolyl 99.3 7.4E-12 2.5E-16 94.2 8.8 90 142-232 59-149 (162)
129 2fbn_A 70 kDa peptidylprolyl i 99.3 9.8E-12 3.4E-16 96.6 9.7 98 146-244 88-186 (198)
130 2ifu_A Gamma-SNAP; membrane fu 99.3 2.5E-11 8.5E-16 101.1 12.7 104 144-249 114-228 (307)
131 3dra_A Protein farnesyltransfe 99.3 3.5E-11 1.2E-15 100.3 13.5 110 139-249 60-180 (306)
132 1dce_A Protein (RAB geranylger 99.3 2.6E-11 8.8E-16 109.5 13.4 109 140-249 57-178 (567)
133 3ro3_A PINS homolog, G-protein 99.3 1.6E-11 5.5E-16 90.6 10.1 103 146-248 49-162 (164)
134 1zu2_A Mitochondrial import re 99.3 4.8E-12 1.6E-16 94.7 7.1 75 142-217 32-127 (158)
135 2qfc_A PLCR protein; TPR, HTH, 99.3 8.7E-11 3E-15 96.9 15.5 103 145-247 114-228 (293)
136 3ulq_A Response regulator aspa 99.3 1.7E-11 5.9E-16 104.7 11.4 107 142-248 180-297 (383)
137 2xpi_A Anaphase-promoting comp 99.3 3.1E-11 1E-15 108.5 13.3 104 143-247 404-507 (597)
138 2ond_A Cleavage stimulation fa 99.3 2.6E-11 8.8E-16 100.9 11.9 103 144-247 131-238 (308)
139 1ihg_A Cyclophilin 40; ppiase 99.3 3.2E-11 1.1E-15 103.3 12.4 95 142-237 269-363 (370)
140 4g1t_A Interferon-induced prot 99.3 1.6E-11 5.4E-16 107.3 10.6 106 142-248 243-367 (472)
141 2qfc_A PLCR protein; TPR, HTH, 99.3 2.9E-11 1E-15 99.8 11.6 102 145-247 154-269 (293)
142 3ro2_A PINS homolog, G-protein 99.3 4E-11 1.4E-15 98.9 12.3 102 146-248 5-116 (338)
143 4a1s_A PINS, partner of inscut 99.3 3E-11 1E-15 103.6 11.9 104 143-247 45-158 (411)
144 2ifu_A Gamma-SNAP; membrane fu 99.3 1.6E-11 5.4E-16 102.3 9.2 105 144-249 74-189 (307)
145 3sf4_A G-protein-signaling mod 99.3 3.9E-11 1.3E-15 102.1 11.7 102 146-248 9-120 (406)
146 1ouv_A Conserved hypothetical 99.3 1.1E-10 3.7E-15 94.9 13.7 99 143-246 35-145 (273)
147 1dce_A Protein (RAB geranylger 99.3 1.8E-11 6.3E-16 110.5 9.9 108 141-249 102-226 (567)
148 3u3w_A Transcriptional activat 99.2 2.6E-11 9E-16 100.1 10.0 104 146-249 115-230 (293)
149 3ma5_A Tetratricopeptide repea 99.2 2E-11 6.8E-16 84.6 7.8 83 143-226 4-88 (100)
150 3q15_A PSP28, response regulat 99.2 3.3E-11 1.1E-15 102.9 10.8 104 144-247 180-293 (378)
151 3gw4_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 92.7 9.9 107 142-248 62-180 (203)
152 2hr2_A Hypothetical protein; a 99.2 1.8E-11 6.3E-16 91.7 7.6 77 144-221 55-142 (159)
153 3qou_A Protein YBBN; thioredox 99.2 2.9E-11 9.8E-16 99.9 9.5 88 156-244 195-284 (287)
154 3ulq_A Response regulator aspa 99.2 4.4E-11 1.5E-15 102.2 10.7 105 143-247 140-256 (383)
155 2kck_A TPR repeat; tetratricop 99.2 4.3E-11 1.5E-15 83.1 8.7 72 175-247 1-72 (112)
156 3nf1_A KLC 1, kinesin light ch 99.2 3.4E-11 1.2E-15 98.8 9.5 104 143-247 108-227 (311)
157 3ro3_A PINS homolog, G-protein 99.2 5.1E-11 1.7E-15 87.9 9.5 105 144-248 7-122 (164)
158 1hxi_A PEX5, peroxisome target 99.2 5.9E-11 2E-15 85.2 9.3 67 182-248 18-84 (121)
159 2c2l_A CHIP, carboxy terminus 99.2 1.1E-11 3.8E-16 102.1 5.9 104 142-248 34-168 (281)
160 3q49_B STIP1 homology and U bo 99.2 9.8E-11 3.4E-15 84.8 10.2 73 175-248 4-76 (137)
161 3dss_A Geranylgeranyl transfer 99.2 1.2E-10 4.2E-15 97.8 11.4 108 141-249 103-227 (331)
162 3dra_A Protein farnesyltransfe 99.2 8.3E-11 2.8E-15 98.1 10.3 107 142-249 99-220 (306)
163 2kc7_A BFR218_protein; tetratr 99.2 6.7E-11 2.3E-15 81.1 8.0 66 184-249 3-69 (99)
164 1ouv_A Conserved hypothetical 99.2 3.8E-10 1.3E-14 91.7 13.6 97 145-246 73-181 (273)
165 1na0_A Designed protein CTPR3; 99.2 3.5E-10 1.2E-14 79.7 11.5 85 144-229 41-125 (125)
166 4f3v_A ESX-1 secretion system 99.2 7.8E-11 2.7E-15 96.6 9.0 105 142-247 132-240 (282)
167 1elw_A TPR1-domain of HOP; HOP 99.2 2.7E-10 9.2E-15 79.6 10.7 83 142-225 34-116 (118)
168 3sf4_A G-protein-signaling mod 99.1 1.2E-10 4.2E-15 99.0 9.5 105 144-248 185-300 (406)
169 3q7a_A Farnesyltransferase alp 99.1 2.7E-10 9.3E-15 96.2 11.3 111 138-249 80-201 (349)
170 3dss_A Geranylgeranyl transfer 99.1 6.1E-10 2.1E-14 93.6 13.2 107 142-249 60-179 (331)
171 4a1s_A PINS, partner of inscut 99.1 1.4E-10 4.7E-15 99.4 9.2 104 144-248 221-336 (411)
172 2dba_A Smooth muscle cell asso 99.1 1.1E-09 3.8E-14 79.9 12.9 81 146-227 65-145 (148)
173 3rjv_A Putative SEL1 repeat pr 99.1 4.4E-10 1.5E-14 88.5 11.0 96 145-244 49-158 (212)
174 3bee_A Putative YFRE protein; 99.1 5.4E-10 1.8E-14 76.5 9.7 71 176-247 2-75 (93)
175 3q15_A PSP28, response regulat 99.1 4.5E-10 1.5E-14 95.9 11.2 105 143-247 138-254 (378)
176 3gw4_A Uncharacterized protein 99.1 4.2E-10 1.4E-14 86.8 10.1 101 146-247 26-139 (203)
177 3q7a_A Farnesyltransferase alp 99.1 9.4E-10 3.2E-14 92.9 12.8 96 153-249 61-159 (349)
178 2xev_A YBGF; tetratricopeptide 99.1 1.4E-09 4.7E-14 77.8 11.9 84 146-230 39-125 (129)
179 3ro2_A PINS homolog, G-protein 99.1 2.4E-10 8.4E-15 94.1 8.9 104 145-248 182-296 (338)
180 2kat_A Uncharacterized protein 99.1 2.3E-10 7.7E-15 80.8 7.4 83 143-226 16-100 (115)
181 3n71_A Histone lysine methyltr 99.1 6.3E-10 2.2E-14 98.5 11.4 104 142-245 305-423 (490)
182 2v5f_A Prolyl 4-hydroxylase su 99.1 1.9E-09 6.4E-14 75.2 10.9 77 146-223 5-88 (104)
183 3rjv_A Putative SEL1 repeat pr 99.0 2.3E-09 7.9E-14 84.3 12.1 103 144-247 83-200 (212)
184 1pc2_A Mitochondria fission pr 99.0 1.2E-09 4.2E-14 80.9 9.4 88 161-249 13-105 (152)
185 3qww_A SET and MYND domain-con 99.0 1.7E-09 5.9E-14 94.3 11.1 101 146-246 298-413 (433)
186 1elr_A TPR2A-domain of HOP; HO 99.0 2.1E-09 7.2E-14 76.4 8.5 69 180-248 3-71 (131)
187 2ooe_A Cleavage stimulation fa 99.0 3.4E-09 1.2E-13 94.5 11.1 105 142-247 268-388 (530)
188 3qwp_A SET and MYND domain-con 99.0 3.9E-09 1.3E-13 92.1 10.9 100 146-245 287-401 (429)
189 3ly7_A Transcriptional activat 98.9 1.1E-08 3.7E-13 86.6 13.1 101 146-248 196-343 (372)
190 2ooe_A Cleavage stimulation fa 98.9 5.5E-09 1.9E-13 93.2 10.9 104 143-247 318-423 (530)
191 1klx_A Cysteine rich protein B 98.9 2E-08 6.7E-13 73.6 12.1 90 152-246 31-128 (138)
192 1hz4_A MALT regulatory protein 98.9 5.1E-09 1.7E-13 88.7 9.2 101 147-248 94-207 (373)
193 1hz4_A MALT regulatory protein 98.9 1.4E-08 4.8E-13 86.0 11.8 68 146-213 135-206 (373)
194 4f3v_A ESX-1 secretion system 98.8 6.6E-09 2.3E-13 85.2 7.6 97 147-245 103-201 (282)
195 2xm6_A Protein corresponding t 98.8 8.9E-08 3.1E-12 84.4 13.4 96 146-246 328-434 (490)
196 3n71_A Histone lysine methyltr 98.8 2E-08 6.7E-13 89.0 8.7 102 143-245 348-465 (490)
197 3bee_A Putative YFRE protein; 98.7 3.2E-08 1.1E-12 67.5 7.4 71 145-216 5-78 (93)
198 3u64_A Protein TP_0956; tetrat 98.7 6.6E-08 2.3E-12 78.9 10.4 88 161-248 178-273 (301)
199 2v5f_A Prolyl 4-hydroxylase su 98.7 7.4E-08 2.5E-12 67.0 9.2 70 180-249 4-80 (104)
200 3e4b_A ALGK; tetratricopeptide 98.7 1.1E-07 3.9E-12 83.3 10.8 93 148-244 178-280 (452)
201 2xm6_A Protein corresponding t 98.6 5E-07 1.7E-11 79.6 14.2 97 144-245 73-181 (490)
202 1pc2_A Mitochondria fission pr 98.6 2.5E-07 8.4E-12 68.5 8.5 80 145-224 31-114 (152)
203 3e4b_A ALGK; tetratricopeptide 98.5 7.5E-07 2.6E-11 78.0 12.1 94 144-244 246-351 (452)
204 1klx_A Cysteine rich protein B 98.5 8.6E-07 2.9E-11 64.7 9.5 79 159-244 8-90 (138)
205 4b4t_Q 26S proteasome regulato 98.4 6.9E-07 2.4E-11 76.8 8.6 100 149-248 7-128 (434)
206 1nzn_A CGI-135 protein, fissio 98.4 1.4E-06 4.8E-11 62.2 8.6 88 161-249 16-108 (126)
207 1xi4_A Clathrin heavy chain; a 98.4 1.7E-06 5.9E-11 83.9 11.0 93 147-248 1196-1313(1630)
208 1xi4_A Clathrin heavy chain; a 98.4 3.3E-06 1.1E-10 82.0 12.9 89 153-247 1056-1166(1630)
209 4b4t_Q 26S proteasome regulato 98.3 3.7E-06 1.3E-10 72.2 11.6 103 146-248 95-208 (434)
210 3mv2_B Coatomer subunit epsilo 98.3 4.6E-06 1.6E-10 69.2 11.4 103 144-247 134-243 (310)
211 1b89_A Protein (clathrin heavy 98.2 9.6E-07 3.3E-11 76.6 5.1 93 146-248 148-240 (449)
212 3mv2_B Coatomer subunit epsilo 98.2 6.3E-06 2.2E-10 68.3 9.8 96 148-248 178-286 (310)
213 1b89_A Protein (clathrin heavy 98.2 9E-06 3.1E-10 70.5 10.3 86 147-247 123-208 (449)
214 3qww_A SET and MYND domain-con 98.2 4.4E-06 1.5E-10 72.8 7.8 75 143-218 337-424 (433)
215 3ffl_A Anaphase-promoting comp 98.1 2.1E-05 7.1E-10 58.6 9.7 92 148-239 22-146 (167)
216 3qwp_A SET and MYND domain-con 98.1 5.5E-06 1.9E-10 72.1 7.2 83 143-226 326-424 (429)
217 3u64_A Protein TP_0956; tetrat 98.1 3.5E-05 1.2E-09 62.9 10.7 105 143-248 103-237 (301)
218 3ly7_A Transcriptional activat 98.0 1.7E-05 6E-10 67.0 7.9 75 143-219 274-348 (372)
219 1nzn_A CGI-135 protein, fissio 97.9 8.3E-05 2.8E-09 53.0 8.8 79 146-224 35-117 (126)
220 3o48_A Mitochondria fission 1 97.8 0.00015 5.2E-09 51.9 8.3 78 146-223 40-120 (134)
221 1y8m_A FIS1; mitochondria, unk 97.7 0.00028 9.7E-09 51.1 8.9 78 146-223 39-119 (144)
222 1y8m_A FIS1; mitochondria, unk 97.6 0.001 3.4E-08 48.2 10.9 71 179-249 37-111 (144)
223 3uim_A Brassinosteroid insensi 97.6 1.6E-05 5.5E-10 66.1 1.5 72 1-72 224-308 (326)
224 2qkw_B Protein kinase; three-h 97.6 3.2E-05 1.1E-09 64.2 3.1 76 1-76 230-316 (321)
225 3o48_A Mitochondria fission 1 97.5 0.00087 3E-08 47.9 9.7 72 178-249 37-112 (134)
226 3hmm_A TGF-beta receptor type- 97.5 1.9E-05 6.4E-10 65.5 0.6 37 40-76 262-298 (303)
227 2ff4_A Probable regulatory pro 97.4 0.0057 2E-07 52.3 15.2 101 143-243 112-233 (388)
228 4e6h_A MRNA 3'-END-processing 97.4 0.00073 2.5E-08 62.1 10.1 82 163-245 326-408 (679)
229 4e6h_A MRNA 3'-END-processing 97.4 0.0013 4.3E-08 60.5 11.5 99 148-246 436-535 (679)
230 3omv_A RAF proto-oncogene seri 97.4 2.7E-05 9.2E-10 64.7 -0.1 68 1-76 226-301 (307)
231 3ffl_A Anaphase-promoting comp 97.2 0.0017 5.7E-08 48.3 8.5 82 143-225 60-165 (167)
232 4aoj_A High affinity nerve gro 97.1 0.00025 8.4E-09 59.5 3.5 32 45-76 289-320 (329)
233 4gns_B Protein CSD3, chitin bi 97.0 0.002 6.8E-08 59.6 8.3 59 183-241 339-397 (754)
234 2nru_A Interleukin-1 receptor- 96.9 0.00047 1.6E-08 56.5 3.2 73 1-74 223-305 (307)
235 4asz_A BDNF/NT-3 growth factor 96.8 0.00054 1.8E-08 56.6 3.0 67 1-76 219-290 (299)
236 4h7y_A Dual specificity protei 96.8 0.0091 3.1E-07 43.7 9.0 84 163-247 36-126 (161)
237 3kae_A CDC27, possible protein 96.8 0.025 8.5E-07 42.3 11.1 95 146-246 33-145 (242)
238 4gt4_A Tyrosine-protein kinase 96.7 7.6E-05 2.6E-09 62.0 -3.2 30 44-73 275-304 (308)
239 4g26_A Pentatricopeptide repea 96.7 0.036 1.2E-06 49.0 13.9 95 148-243 107-203 (501)
240 4gns_B Protein CSD3, chitin bi 96.7 0.0053 1.8E-07 56.8 8.6 61 146-207 337-397 (754)
241 1zbp_A Hypothetical protein VP 96.6 0.027 9.4E-07 45.2 11.1 93 154-247 5-132 (273)
242 3gxj_A TGF-beta receptor type- 96.5 0.001 3.5E-08 54.2 2.1 37 40-76 262-298 (303)
243 4ase_A Vascular endothelial gr 96.5 0.0013 4.6E-08 55.5 2.8 31 45-75 317-347 (353)
244 1ya0_A SMG-7 transcript varian 96.2 0.029 9.8E-07 49.5 10.2 79 148-227 154-232 (497)
245 3soc_A Activin receptor type-2 96.2 0.0017 5.8E-08 53.8 2.2 36 41-76 284-319 (322)
246 2uy1_A Cleavage stimulation fa 96.1 0.071 2.4E-06 46.9 12.2 93 147-241 287-380 (493)
247 3poz_A Epidermal growth factor 95.9 0.0006 2.1E-08 56.7 -2.1 33 44-76 247-279 (327)
248 3txn_A 26S proteasome regulato 95.8 0.071 2.4E-06 45.5 10.3 93 151-243 104-209 (394)
249 1zbp_A Hypothetical protein VP 95.8 0.035 1.2E-06 44.6 7.8 61 189-249 5-65 (273)
250 4b4t_R RPN7, 26S proteasome re 95.8 0.031 1.1E-06 48.3 8.2 96 148-243 133-236 (429)
251 3op5_A Serine/threonine-protei 95.7 0.0022 7.6E-08 54.0 0.8 74 1-77 250-331 (364)
252 2uy1_A Cleavage stimulation fa 95.7 0.083 2.8E-06 46.5 10.8 102 143-247 210-352 (493)
253 3mdy_A Bone morphogenetic prot 95.7 0.0031 1.1E-07 52.2 1.3 38 40-77 296-333 (337)
254 3lxp_A Non-receptor tyrosine-p 95.6 0.0012 4E-08 54.6 -1.5 34 44-77 279-312 (318)
255 1b6c_B TGF-B superfamily recep 95.6 0.0051 1.7E-07 51.0 2.4 37 40-76 301-337 (342)
256 3og7_A AKAP9-BRAF fusion prote 95.6 0.0037 1.3E-07 50.7 1.5 31 44-74 257-287 (289)
257 3lb7_A RAF proto-oncogene seri 95.5 0.0054 1.8E-07 50.4 2.4 33 44-76 269-301 (307)
258 2eva_A TAK1 kinase - TAB1 chim 95.4 0.0066 2.3E-07 49.8 2.6 33 45-77 233-265 (307)
259 3kmu_A ILK, integrin-linked ki 95.4 0.0047 1.6E-07 49.3 1.3 30 45-74 240-269 (271)
260 3s95_A LIMK-1, LIM domain kina 95.2 0.0019 6.5E-08 53.0 -1.5 32 45-76 252-283 (310)
261 2qol_A Ephrin receptor; recept 95.1 0.0011 3.7E-08 56.3 -3.4 34 44-77 278-311 (373)
262 2y4i_B KSR2, HKSR2, kinase sup 95.1 0.0069 2.4E-07 49.7 1.6 32 45-76 272-303 (319)
263 4g26_A Pentatricopeptide repea 95.1 0.21 7.1E-06 44.0 11.2 85 159-244 83-169 (501)
264 3dtc_A Mitogen-activated prote 95.1 0.0067 2.3E-07 48.5 1.4 29 45-73 243-271 (271)
265 2wqm_A Serine/threonine-protei 95.0 0.0064 2.2E-07 49.7 1.0 33 45-77 267-299 (310)
266 2a19_B Interferon-induced, dou 94.8 0.0051 1.7E-07 49.4 0.2 33 45-77 244-276 (284)
267 4f0f_A Serine/threonine-protei 94.8 0.0065 2.2E-07 49.1 0.7 29 45-73 259-287 (287)
268 3kex_A Receptor tyrosine-prote 94.8 0.017 5.8E-07 47.7 3.2 32 45-76 246-277 (325)
269 3vhe_A Vascular endothelial gr 94.7 0.0098 3.4E-07 49.6 1.6 31 45-75 325-355 (359)
270 2ff4_A Probable regulatory pro 94.6 0.16 5.5E-06 43.2 8.9 63 146-209 171-233 (388)
271 3kae_A CDC27, possible protein 94.5 1.1 3.8E-05 33.5 14.4 102 146-247 62-240 (242)
272 3lzb_A Epidermal growth factor 94.4 0.003 1E-07 52.5 -2.2 32 45-76 248-279 (327)
273 1ya0_A SMG-7 transcript varian 94.4 0.18 6E-06 44.5 8.8 62 183-244 154-215 (497)
274 2jii_A Serine/threonine-protei 94.2 0.013 4.5E-07 48.9 1.3 33 45-77 306-338 (352)
275 3mkq_B Coatomer subunit alpha; 94.1 0.46 1.6E-05 35.7 9.4 29 145-173 33-61 (177)
276 1opk_A P150, C-ABL, proto-onco 93.9 0.0042 1.4E-07 54.8 -2.5 31 44-74 447-477 (495)
277 3ll6_A Cyclin G-associated kin 93.9 0.0054 1.8E-07 50.6 -1.8 33 45-77 278-310 (337)
278 3mkq_A Coatomer beta'-subunit; 93.6 0.8 2.7E-05 42.0 12.1 47 155-207 661-707 (814)
279 3fpq_A Serine/threonine-protei 93.4 0.014 4.7E-07 47.8 -0.0 24 45-68 259-282 (290)
280 2psq_A Fibroblast growth facto 93.4 0.0059 2E-07 51.6 -2.3 33 44-76 333-365 (370)
281 4fhn_B Nucleoporin NUP120; pro 93.2 0.28 9.5E-06 47.8 8.7 91 148-238 844-961 (1139)
282 3p1a_A MYT1 kinase, membrane-a 93.2 0.014 4.9E-07 47.8 -0.2 24 45-68 281-304 (311)
283 3sv0_A Casein kinase I-like; t 93.0 0.015 5.2E-07 51.2 -0.4 33 44-76 247-279 (483)
284 3spa_A Mtrpol, DNA-directed RN 93.0 1.8 6.1E-05 41.5 13.3 94 147-243 128-229 (1134)
285 4g3f_A NF-kappa-beta-inducing 92.7 0.043 1.5E-06 45.9 2.0 32 45-76 286-317 (336)
286 4b4t_P 26S proteasome regulato 92.6 1.7 5.8E-05 37.6 12.1 100 145-244 136-247 (445)
287 2ozo_A Tyrosine-protein kinase 92.6 0.01 3.6E-07 53.8 -2.1 33 44-76 567-599 (613)
288 3dbq_A Dual specificity protei 92.6 0.012 4E-07 49.1 -1.6 26 44-69 249-274 (343)
289 2zmd_A Dual specificity protei 92.3 0.014 4.6E-07 49.8 -1.7 25 45-69 297-321 (390)
290 3q4u_A Activin receptor type-1 92.3 0.099 3.4E-06 42.1 3.6 33 41-73 268-300 (301)
291 3ugc_A Tyrosine-protein kinase 92.2 0.088 3E-06 42.4 3.2 33 44-76 260-292 (295)
292 3mkq_A Coatomer beta'-subunit; 92.0 0.89 3.1E-05 41.7 10.1 27 146-172 681-707 (814)
293 4b4t_S RPN3, 26S proteasome re 92.0 0.3 1E-05 43.1 6.4 75 174-248 224-303 (523)
294 4h7y_A Dual specificity protei 92.0 0.85 2.9E-05 33.3 7.7 71 158-230 72-142 (161)
295 3is5_A Calcium-dependent prote 91.8 0.04 1.4E-06 44.4 0.7 24 45-68 255-278 (285)
296 4fl3_A Tyrosine-protein kinase 91.8 0.012 4.1E-07 53.6 -2.7 30 45-74 601-630 (635)
297 1x8b_A WEE1HU, WEE1-like prote 91.6 0.069 2.4E-06 42.6 1.9 25 45-69 256-280 (289)
298 2w1i_A JAK2; chromosomal rearr 91.4 0.12 4.2E-06 42.3 3.3 33 44-76 291-323 (326)
299 2clq_A Mitogen-activated prote 91.3 0.044 1.5E-06 44.1 0.4 25 45-69 255-279 (295)
300 1t4h_A Serine/threonine-protei 91.1 0.041 1.4E-06 44.4 -0.0 24 45-68 259-282 (290)
301 3kul_A Ephrin type-A receptor 91.0 0.15 5E-06 42.0 3.3 34 44-77 282-315 (325)
302 3cek_A Dual specificity protei 90.9 0.023 8E-07 46.4 -1.6 25 45-69 269-293 (313)
303 3sxs_A Cytoplasmic tyrosine-pr 90.7 0.13 4.5E-06 40.7 2.7 32 45-76 234-265 (268)
304 2w5a_A Serine/threonine-protei 90.6 0.077 2.6E-06 42.3 1.2 27 45-71 244-270 (279)
305 2h34_A Serine/threonine-protei 90.4 0.085 2.9E-06 43.0 1.3 30 45-74 265-295 (309)
306 2vwi_A Serine/threonine-protei 90.3 0.033 1.1E-06 45.0 -1.3 24 45-68 264-287 (303)
307 4hcu_A Tyrosine-protein kinase 90.2 0.18 6.2E-06 39.9 3.2 31 45-75 236-266 (269)
308 3t9t_A Tyrosine-protein kinase 90.2 0.19 6.4E-06 39.7 3.2 31 45-75 234-264 (267)
309 3g2f_A Bone morphogenetic prot 90.2 0.19 6.6E-06 41.2 3.3 36 42-77 285-320 (336)
310 3mkq_B Coatomer subunit alpha; 90.1 4 0.00014 30.5 10.2 81 156-242 15-116 (177)
311 3cbl_A C-FES, proto-oncogene t 90.1 0.18 6.3E-06 42.4 3.3 31 45-75 344-374 (377)
312 2w2u_A Hypothetical P60 katani 90.0 1.6 5.4E-05 28.3 7.0 32 144-175 17-48 (83)
313 3uzp_A CKI-delta, CKID, casein 89.9 0.24 8.1E-06 39.7 3.6 33 45-77 250-282 (296)
314 4e5w_A Tyrosine-protein kinase 89.7 0.22 7.5E-06 40.1 3.3 30 44-73 271-300 (302)
315 3lxl_A Tyrosine-protein kinase 89.7 0.2 6.7E-06 41.1 3.0 33 44-76 272-304 (327)
316 3kfa_A Tyrosine-protein kinase 89.7 0.18 6.1E-06 40.3 2.7 34 44-77 240-273 (288)
317 4hgt_A Casein kinase I isoform 89.6 0.25 8.7E-06 39.5 3.6 34 44-77 249-282 (296)
318 1byg_A CSK, protein (C-termina 89.6 0.23 7.8E-06 39.6 3.3 32 45-76 243-274 (278)
319 3fme_A Dual specificity mitoge 89.3 0.052 1.8E-06 43.6 -0.8 24 45-68 243-266 (290)
320 2c30_A Serine/threonine-protei 89.3 0.079 2.7E-06 43.6 0.3 25 45-69 271-295 (321)
321 1xbb_A Tyrosine-protein kinase 89.3 0.29 9.9E-06 39.3 3.7 32 45-76 249-280 (291)
322 1mqb_A Ephrin type-A receptor 89.3 0.31 1.1E-05 40.1 3.9 34 44-77 278-311 (333)
323 3cc6_A Protein tyrosine kinase 89.2 0.25 8.4E-06 39.4 3.2 32 45-76 243-274 (281)
324 3fxz_A Serine/threonine-protei 89.0 0.066 2.3E-06 43.5 -0.4 25 45-69 246-270 (297)
325 1csn_A Casein kinase-1; phosph 88.9 0.26 8.9E-06 39.5 3.1 33 44-76 252-284 (298)
326 3f66_A Hepatocyte growth facto 88.8 0.26 8.8E-06 39.7 3.1 32 45-76 261-292 (298)
327 3gen_A Tyrosine-protein kinase 88.8 0.3 1E-05 38.9 3.5 31 45-75 250-280 (283)
328 2v6y_A AAA family ATPase, P60 88.8 2.3 7.8E-05 27.5 7.1 32 144-175 9-40 (83)
329 1mp8_A Focal adhesion kinase 1 88.8 0.28 9.6E-06 39.1 3.3 31 45-75 246-276 (281)
330 4eut_A Serine/threonine-protei 88.8 0.25 8.7E-06 41.8 3.1 37 40-76 274-310 (396)
331 3ax2_A Mitochondrial import re 88.7 2.3 7.8E-05 26.8 6.7 29 150-178 21-49 (73)
332 1qpc_A LCK kinase; alpha beta 88.7 0.29 9.9E-06 38.9 3.3 33 44-76 238-270 (279)
333 2i1m_A Macrophage colony-stimu 88.5 0.29 9.9E-06 40.1 3.3 31 45-75 296-326 (333)
334 3tt0_A Basic fibroblast growth 88.5 0.3 1E-05 41.1 3.4 34 44-77 321-354 (382)
335 3cok_A Serine/threonine-protei 88.3 0.056 1.9E-06 43.2 -1.2 24 45-68 239-262 (278)
336 2ivs_A Proto-oncogene tyrosine 88.3 0.29 9.9E-06 39.6 3.1 32 44-75 280-311 (314)
337 2buj_A Serine/threonine-protei 88.3 0.27 9.2E-06 39.9 2.9 32 44-75 275-306 (317)
338 2xir_A Vascular endothelial gr 88.2 0.32 1.1E-05 39.4 3.3 32 45-76 280-311 (316)
339 1u46_A ACK-1, activated CDC42 88.1 0.3 1E-05 39.0 3.0 32 44-75 253-284 (291)
340 3pls_A Macrophage-stimulating 88.0 0.34 1.1E-05 38.9 3.3 34 44-77 256-289 (298)
341 1t46_A HOMO sapiens V-KIT hard 88.0 0.33 1.1E-05 39.2 3.3 32 45-76 277-308 (313)
342 3brb_A Proto-oncogene tyrosine 88.0 0.37 1.3E-05 39.1 3.5 33 44-76 277-309 (313)
343 4b9d_A Serine/threonine-protei 87.9 0.15 5.3E-06 42.7 1.2 24 45-68 253-276 (350)
344 3kk8_A Calcium/calmodulin depe 87.8 0.094 3.2E-06 41.9 -0.2 25 45-69 238-262 (284)
345 3p86_A Serine/threonine-protei 87.8 0.3 1E-05 39.8 2.9 32 45-76 268-299 (309)
346 2ijq_A Hypothetical protein; s 87.6 4.8 0.00016 29.6 8.9 62 149-210 35-104 (161)
347 3hyh_A Carbon catabolite-derep 87.6 0.2 7E-06 40.5 1.7 24 45-68 239-262 (275)
348 1u59_A Tyrosine-protein kinase 87.6 0.36 1.2E-05 38.6 3.2 34 44-77 241-274 (287)
349 2zv2_A Calcium/calmodulin-depe 87.4 0.089 3E-06 42.5 -0.5 24 45-68 269-292 (298)
350 3l9p_A Anaplastic lymphoma kin 87.4 0.28 9.5E-06 41.1 2.5 33 45-77 315-347 (367)
351 3qup_A Tyrosine-protein kinase 87.4 0.4 1.4E-05 39.1 3.4 34 44-77 267-300 (323)
352 4fvq_A Tyrosine-protein kinase 87.4 0.24 8.2E-06 39.6 2.0 32 45-76 245-276 (289)
353 1qcf_A Haematopoetic cell kina 87.3 0.33 1.1E-05 42.0 2.9 33 44-76 413-445 (454)
354 2pvf_A Fibroblast growth facto 87.3 0.38 1.3E-05 39.5 3.2 33 45-77 288-320 (334)
355 3q60_A ROP5B; pseudokinase, tr 87.2 0.036 1.2E-06 46.6 -3.1 24 45-68 329-352 (371)
356 1luf_A Muscle-specific tyrosin 87.2 0.36 1.2E-05 39.6 3.0 33 44-76 304-336 (343)
357 4a5x_A MITD1, MIT domain-conta 87.2 1.1 3.6E-05 29.3 4.7 31 145-175 15-45 (86)
358 2a2a_A Death-associated protei 87.1 0.21 7.1E-06 40.9 1.5 25 45-69 249-273 (321)
359 1u5q_A Serine/threonine protei 86.9 0.085 2.9E-06 44.0 -1.0 25 45-69 282-306 (348)
360 2rio_A Serine/threonine-protei 86.1 0.35 1.2E-05 41.5 2.5 26 43-68 270-295 (434)
361 3c1x_A Hepatocyte growth facto 86.0 0.49 1.7E-05 39.8 3.3 32 45-76 325-356 (373)
362 2yfx_A Tyrosine-protein kinase 85.9 0.49 1.7E-05 38.6 3.2 33 45-77 274-306 (327)
363 1k9a_A Carboxyl-terminal SRC k 85.7 0.51 1.7E-05 40.8 3.3 32 45-76 415-446 (450)
364 2x7f_A TRAF2 and NCK-interacti 85.6 0.13 4.5E-06 42.0 -0.5 25 45-69 263-287 (326)
365 3lm5_A Serine/threonine-protei 85.4 0.16 5.5E-06 41.7 -0.0 25 45-69 264-288 (327)
366 1rjb_A FL cytokine receptor; k 85.4 0.51 1.8E-05 38.8 3.1 32 45-76 304-335 (344)
367 1wfd_A Hypothetical protein 15 85.2 1.4 4.7E-05 29.2 4.5 31 145-175 14-44 (93)
368 3t5v_B Nuclear mRNA export pro 85.2 1.5 5.2E-05 38.0 6.0 90 159-248 139-254 (455)
369 2v6x_A Vacuolar protein sortin 85.1 1.4 4.9E-05 28.5 4.5 31 145-175 12-42 (85)
370 1wy6_A Hypothetical protein ST 85.0 7.3 0.00025 28.1 8.3 79 159-243 74-153 (172)
371 2crb_A Nuclear receptor bindin 84.9 1.3 4.3E-05 29.2 4.0 28 146-173 15-42 (97)
372 1fvr_A Tyrosine-protein kinase 84.9 0.59 2E-05 38.1 3.2 32 45-76 270-301 (327)
373 1fmk_A C-SRC, P60-SRC, tyrosin 84.7 0.58 2E-05 40.4 3.2 32 45-76 410-441 (452)
374 2v62_A Serine/threonine-protei 84.5 0.5 1.7E-05 39.0 2.6 30 44-73 297-326 (345)
375 1kob_A Twitchin; kinase, intra 84.5 0.27 9.2E-06 41.7 0.9 25 45-69 281-305 (387)
376 2cpt_A SKD1 protein, vacuolar 84.4 1.5 5E-05 30.5 4.5 31 145-175 17-47 (117)
377 4fih_A Serine/threonine-protei 84.3 0.18 6.2E-06 42.2 -0.2 24 45-68 300-323 (346)
378 1p4o_A Insulin-like growth fac 83.9 0.6 2E-05 37.9 2.8 30 45-74 269-298 (322)
379 1qsa_A Protein (soluble lytic 83.8 6.1 0.00021 35.7 9.5 89 153-243 259-347 (618)
380 2crb_A Nuclear receptor bindin 83.5 2.1 7.1E-05 28.2 4.6 27 182-208 16-42 (97)
381 3ork_A Serine/threonine protei 81.4 0.2 6.7E-06 40.8 -1.1 28 45-72 250-278 (311)
382 3soa_A Calcium/calmodulin-depe 81.2 0.41 1.4E-05 41.4 0.8 25 45-69 244-268 (444)
383 4b4t_R RPN7, 26S proteasome re 81.1 2.9 0.0001 35.8 6.2 66 180-245 130-198 (429)
384 4fie_A Serine/threonine-protei 81.1 0.34 1.2E-05 41.7 0.3 24 45-68 377-400 (423)
385 2h8h_A Proto-oncogene tyrosine 80.6 0.92 3.1E-05 40.2 2.9 32 45-76 493-524 (535)
386 4fhn_B Nucleoporin NUP120; pro 79.7 7.6 0.00026 37.8 9.2 90 152-246 818-930 (1139)
387 2izr_A Casein kinase I isoform 79.5 1.1 3.9E-05 36.5 3.0 34 44-77 250-283 (330)
388 3ax2_A Mitochondrial import re 79.4 2.6 8.8E-05 26.5 3.9 29 219-247 21-49 (73)
389 3txn_A 26S proteasome regulato 78.6 5.2 0.00018 34.0 6.8 60 186-245 104-169 (394)
390 2wpv_A GET4, UPF0363 protein Y 78.0 27 0.00092 28.5 10.9 91 150-240 57-159 (312)
391 3lij_A Calcium/calmodulin depe 77.8 0.88 3E-05 39.7 1.9 25 45-69 268-292 (494)
392 4gq2_M Nucleoporin NUP120; bet 76.6 12 0.00043 35.5 9.5 88 152-244 816-926 (950)
393 1wak_A Serine/threonine-protei 76.5 1.9 6.6E-05 35.8 3.6 30 39-68 362-391 (397)
394 3t5x_A PCI domain-containing p 76.5 6.6 0.00022 29.9 6.3 54 143-197 11-69 (203)
395 2j0j_A Focal adhesion kinase 1 76.2 1.7 5.6E-05 39.6 3.3 32 44-75 620-651 (656)
396 4b4t_S RPN3, 26S proteasome re 76.1 5.6 0.00019 35.0 6.4 69 146-214 231-303 (523)
397 4agu_A Cyclin-dependent kinase 75.7 1.5 5E-05 35.3 2.5 25 45-69 261-285 (311)
398 1q8y_A SR protein kinase; tran 75.0 2.6 8.9E-05 34.8 4.0 32 38-69 303-334 (373)
399 2cfu_A SDSA1; SDS-hydrolase, l 74.9 4.5 0.00015 36.8 5.8 50 146-196 449-498 (658)
400 1om2_A Protein (mitochondrial 74.6 2.9 9.9E-05 27.7 3.3 29 150-178 24-52 (95)
401 2vkj_A TM1634; membrane protei 74.2 6.8 0.00023 25.5 4.8 33 144-176 51-83 (106)
402 2h6d_A 5'-AMP-activated protei 73.5 1.8 6E-05 34.1 2.4 25 45-69 238-262 (276)
403 2cwy_A Hypothetical protein TT 72.8 8.6 0.00029 25.4 5.3 58 150-209 5-67 (94)
404 2vx3_A Dual specificity tyrosi 72.7 2.5 8.6E-05 35.3 3.3 28 41-68 345-372 (382)
405 3bhy_A Death-associated protei 72.1 2.3 8E-05 33.5 2.9 24 45-68 242-265 (283)
406 1zy4_A Serine/threonine-protei 71.6 2 7E-05 34.1 2.4 26 44-69 259-284 (303)
407 1wy6_A Hypothetical protein ST 71.4 26 0.00088 25.2 7.7 54 156-210 101-154 (172)
408 3uto_A Twitchin; kinase, muscl 71.2 1.9 6.5E-05 38.6 2.3 24 45-68 387-410 (573)
409 2w2u_A Hypothetical P60 katani 70.4 7.9 0.00027 24.9 4.6 18 226-243 30-47 (83)
410 1om2_A Protein (mitochondrial 70.3 4.3 0.00015 26.9 3.3 29 219-247 24-52 (95)
411 3fdn_A Serine/threonine-protei 70.0 2.4 8.1E-05 33.5 2.5 25 45-69 234-258 (279)
412 1z57_A Dual specificity protei 69.6 2 6.9E-05 34.7 2.0 26 43-68 303-328 (339)
413 2eue_A Carbon catabolite derep 69.6 1.5 5.3E-05 34.5 1.3 25 45-69 239-263 (275)
414 3m2w_A MAP kinase-activated pr 69.6 2.5 8.5E-05 33.9 2.5 25 45-69 233-257 (299)
415 2iwi_A Serine/threonine-protei 69.6 2.8 9.6E-05 33.6 2.9 25 45-69 260-284 (312)
416 2rpa_A Katanin P60 ATPase-cont 69.6 6.3 0.00021 25.1 3.9 27 149-175 15-41 (78)
417 2dl1_A Spartin; SPG20, MIT, st 69.4 3.5 0.00012 28.4 2.8 32 197-243 19-50 (116)
418 2wtk_C Serine/threonine-protei 69.3 3.1 0.00011 33.2 3.1 25 45-69 240-264 (305)
419 2ac3_A MAP kinase-interacting 69.1 3.1 0.00011 33.4 3.1 25 45-69 272-296 (316)
420 4gq2_M Nucleoporin NUP120; bet 69.0 19 0.00065 34.3 8.8 52 187-242 816-867 (950)
421 3a99_A Proto-oncogene serine/t 68.9 2.1 7.1E-05 34.8 1.9 25 45-69 270-294 (320)
422 3aln_A Dual specificity mitoge 68.9 1.7 5.8E-05 35.3 1.4 26 44-69 261-286 (327)
423 3llt_A Serine/threonine kinase 68.8 1.7 5.9E-05 35.8 1.4 25 44-68 331-355 (360)
424 2v6y_A AAA family ATPase, P60 68.6 7.2 0.00025 25.0 4.1 16 227-242 23-38 (83)
425 1ob3_A PFPK5, cell division co 68.1 2.8 9.5E-05 33.3 2.5 24 45-68 257-280 (288)
426 3g33_A Cell division protein k 67.9 2.8 9.6E-05 33.6 2.5 25 44-68 272-296 (308)
427 3lpz_A GET4 (YOR164C homolog); 67.8 51 0.0017 27.2 12.9 59 181-239 94-160 (336)
428 2eu9_A Dual specificity protei 67.7 2.3 8E-05 34.7 2.0 26 43-68 308-333 (355)
429 2dyl_A Dual specificity mitoge 67.4 2.4 8.1E-05 34.1 2.0 25 45-69 260-284 (318)
430 3a7i_A MST3 kinase, serine/thr 67.3 1.9 6.6E-05 34.5 1.4 26 45-70 247-272 (303)
431 3t5x_A PCI domain-containing p 67.3 18 0.0006 27.5 6.8 37 181-217 14-50 (203)
432 2yex_A Serine/threonine-protei 66.8 2.5 8.7E-05 33.1 2.0 24 45-68 238-261 (276)
433 3nsz_A CK II alpha, casein kin 66.8 2.8 9.7E-05 33.9 2.4 25 44-68 295-319 (330)
434 3an0_A Dual specificity mitoge 66.6 2 6.9E-05 35.1 1.4 24 45-68 287-310 (340)
435 3re2_A Predicted protein; meni 66.6 26 0.00087 29.4 7.8 31 212-242 293-323 (472)
436 2i6l_A Mitogen-activated prote 66.6 2.9 9.9E-05 33.5 2.4 25 45-69 282-306 (320)
437 3ubd_A Ribosomal protein S6 ki 66.5 1.8 6.3E-05 35.3 1.1 19 45-63 253-271 (304)
438 3niz_A Rhodanese family protei 66.0 3.2 0.00011 33.5 2.5 25 44-68 276-300 (311)
439 3uqc_A Probable conserved tran 65.9 4.5 0.00016 32.3 3.4 31 45-76 236-266 (286)
440 2wei_A Calmodulin-domain prote 65.9 3.2 0.00011 32.9 2.4 24 45-68 253-276 (287)
441 2j7t_A Serine/threonine-protei 65.9 2.7 9.2E-05 33.5 2.0 24 45-68 252-275 (302)
442 3qd2_B Eukaryotic translation 65.9 2.6 8.9E-05 34.0 2.0 25 44-68 301-325 (332)
443 2y0a_A Death-associated protei 65.4 3.3 0.00011 33.7 2.5 25 45-69 248-272 (326)
444 3byv_A Rhoptry kinase; malaria 65.3 2.7 9.3E-05 35.0 2.0 24 45-68 336-359 (377)
445 3fhr_A MAP kinase-activated pr 65.0 3.3 0.00011 33.9 2.5 25 45-69 264-288 (336)
446 3mv2_A Coatomer subunit alpha; 65.0 40 0.0014 27.7 8.7 99 149-247 117-239 (325)
447 4a5x_A MITD1, MIT domain-conta 64.6 12 0.00041 24.2 4.6 26 184-209 19-44 (86)
448 4aaa_A Cyclin-dependent kinase 64.5 1.5 5.1E-05 35.8 0.2 26 44-69 282-307 (331)
449 3eqc_A Dual specificity mitoge 64.3 3.2 0.00011 34.2 2.2 25 45-69 301-325 (360)
450 3kvw_A DYRK2, dual specificity 64.2 3.3 0.00011 35.3 2.4 25 45-69 385-409 (429)
451 2ycf_A Serine/threonine-protei 64.2 3.7 0.00013 33.2 2.5 25 44-68 250-274 (322)
452 1tki_A Titin; serine kinase, m 64.2 4.2 0.00014 33.1 2.9 25 45-69 234-258 (321)
453 2r3i_A Cell division protein k 64.0 3.7 0.00013 32.6 2.5 24 45-68 260-283 (299)
454 2b9h_A MAP kinase FUS3, mitoge 63.7 2.8 9.6E-05 34.3 1.8 25 45-69 282-306 (353)
455 3gbz_A Kinase, CMGC CDK; ssgci 63.7 3 0.0001 34.0 1.9 25 44-68 294-318 (329)
456 3hko_A Calcium/calmodulin-depe 63.5 4.6 0.00016 32.9 3.0 25 45-69 307-331 (345)
457 4aw0_A HPDK1, 3-phosphoinositi 63.5 1.3 4.4E-05 36.4 -0.4 57 1-67 223-283 (311)
458 3dls_A PAS domain-containing s 63.4 3.7 0.00013 33.6 2.4 25 45-69 251-275 (335)
459 1blx_A Cyclin-dependent kinase 63.2 3.9 0.00013 32.9 2.5 24 45-68 273-296 (326)
460 3o0g_A Cell division protein k 63.1 3.2 0.00011 33.0 1.9 24 45-68 259-282 (292)
461 2ynq_A ESSB; membrane protein, 63.1 41 0.0014 24.5 7.9 86 148-239 10-97 (161)
462 2cfu_A SDSA1; SDS-hydrolase, l 62.7 14 0.00047 33.6 6.3 49 183-231 451-499 (658)
463 4eqm_A Protein kinase; transfe 61.6 5.3 0.00018 31.9 3.0 31 45-75 244-275 (294)
464 3e3p_A Protein kinase, putativ 61.5 2.8 9.7E-05 34.4 1.4 27 43-69 289-315 (360)
465 4euu_A Serine/threonine-protei 61.5 10 0.00034 30.5 4.7 33 40-72 274-306 (319)
466 3com_A Serine/threonine-protei 61.3 3.6 0.00012 33.0 2.0 25 45-69 255-279 (314)
467 2v6x_A Vacuolar protein sortin 61.2 15 0.0005 23.5 4.6 17 227-243 25-41 (85)
468 3f3z_A Calcium/calmodulin-depe 61.2 3.7 0.00013 32.2 2.0 24 45-68 238-261 (277)
469 2y7j_A Phosphorylase B kinase 60.9 5.4 0.00019 33.0 3.1 24 45-68 336-359 (365)
470 1wfd_A Hypothetical protein 15 60.9 15 0.0005 24.1 4.6 21 188-208 22-42 (93)
471 2pml_X PFPK7, Ser/Thr protein 60.7 3.7 0.00013 33.5 1.9 24 45-68 299-322 (348)
472 3gni_B Strad alpha; kinase fol 60.5 3.7 0.00013 34.2 2.0 25 45-69 310-334 (389)
473 3qyz_A Mitogen-activated prote 59.6 4.6 0.00016 33.4 2.4 25 45-69 290-314 (364)
474 3mtl_A Cell division protein k 59.6 3.3 0.00011 33.6 1.4 25 45-69 258-282 (324)
475 2w4o_A Calcium/calmodulin-depe 59.0 5.8 0.0002 32.6 2.9 25 45-69 282-306 (349)
476 3pg1_A Mitogen-activated prote 59.0 4.1 0.00014 33.5 1.9 25 45-69 293-317 (362)
477 1phk_A Phosphorylase kinase; g 59.0 3.4 0.00012 32.8 1.4 24 45-68 260-283 (298)
478 2vgo_A Serine/threonine-protei 58.7 4.2 0.00015 32.0 1.9 25 45-69 239-263 (284)
479 1ua2_A CAK, cell division prot 58.4 4.7 0.00016 33.0 2.2 26 44-69 267-292 (346)
480 3tki_A Serine/threonine-protei 58.3 4.4 0.00015 32.9 2.0 25 45-69 238-262 (323)
481 3u84_A Menin; MLL, JUND, ledgf 58.2 42 0.0014 28.7 7.7 44 200-243 298-346 (550)
482 4g31_A Eukaryotic translation 57.8 4.2 0.00014 33.0 1.8 24 45-68 256-279 (299)
483 3i6u_A CDS1, serine/threonine- 57.5 6.6 0.00023 33.3 3.1 26 44-69 375-400 (419)
484 3c0i_A Peripheral plasma membr 57.2 5.7 0.00019 32.7 2.5 24 45-68 263-286 (351)
485 3mi9_A Cell division protein k 57.2 4.3 0.00015 33.2 1.8 25 45-69 288-312 (351)
486 2pmi_A Negative RE, cyclin-dep 57.0 3.8 0.00013 33.1 1.4 25 44-68 269-293 (317)
487 4gq4_A Menin; tumor suppressor 56.9 46 0.0016 28.5 7.8 44 200-243 283-331 (489)
488 2rpa_A Katanin P60 ATPase-cont 56.8 10 0.00035 24.1 3.1 25 219-243 16-40 (78)
489 4exu_A Mitogen-activated prote 56.5 5.9 0.0002 32.9 2.5 26 44-69 299-324 (371)
490 2jam_A Calcium/calmodulin-depe 56.3 5.4 0.00018 31.8 2.2 25 45-69 238-262 (304)
491 3zgw_A Maternal embryonic leuc 56.0 4.6 0.00016 33.4 1.8 25 45-69 237-261 (347)
492 3spa_A Mtrpol, DNA-directed RN 55.8 49 0.0017 32.0 8.7 66 145-210 164-230 (1134)
493 2cpt_A SKD1 protein, vacuolar 55.5 15 0.0005 25.3 4.0 25 185-209 22-46 (117)
494 2rku_A Serine/threonine-protei 55.4 2.7 9.2E-05 33.4 0.2 25 45-69 242-266 (294)
495 3uc3_A Serine/threonine-protei 55.4 5.9 0.0002 32.8 2.4 25 45-69 251-275 (361)
496 3coi_A Mitogen-activated prote 54.8 6.6 0.00022 32.2 2.5 26 44-69 281-306 (353)
497 3mkr_B Coatomer subunit alpha; 54.3 88 0.003 25.6 9.8 99 149-247 105-230 (320)
498 2o8p_A 14-3-3 domain containin 54.0 74 0.0025 24.6 9.3 65 146-210 120-197 (227)
499 3h4j_B AMPK kdaid, SNF1-like p 52.8 5.4 0.00019 32.8 1.7 25 45-69 235-259 (336)
500 2xrw_A Mitogen-activated prote 52.5 7.3 0.00025 32.3 2.5 27 43-69 293-319 (371)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.92 E-value=3.7e-24 Score=156.44 Aligned_cols=107 Identities=18% Similarity=0.281 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
+|+.++.++++|+.+++.|+|++|+.+|+++|+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 4677999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|.++..+|++++|+.+|+++++++|++.
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999864
No 2
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.88 E-value=5.4e-22 Score=149.12 Aligned_cols=107 Identities=15% Similarity=0.070 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC------C-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------S-----PTVYARRCLSYLMNDMPQEALGDAMQAQVV- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~- 210 (251)
...+..+++.|+.+++.|+|++|+.+|++||+++|+. + +.+|.|+|.++..+|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 4568899999999999999999999999999999971 2 339999999999999999999999999999
Q ss_pred ------CCCChHHH----HHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 211 ------SPDWPTAL----YLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 211 ------~p~~~~~~----~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|+++++| |++|.++..+|++++|+.+|+++++++|++.
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999999864
No 3
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.86 E-value=4.2e-21 Score=144.61 Aligned_cols=106 Identities=9% Similarity=-0.028 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
+|..+..++..|..+++.|+|++|+..|+++++++|. ++.+|+++|.++..+|+|++|+..|++|++++|+++.+|+++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 5778899999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+.+|+++++++|+.
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999975
No 4
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=4.6e-21 Score=140.02 Aligned_cols=105 Identities=16% Similarity=0.138 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh-------
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP------- 215 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------- 215 (251)
.+.|..+++.|+.+++.|+|++|+.+|++||+++|+ ++.+|+++|.+|+.+|+|++|+.+|++|++++|++.
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 355888999999999999999999999999999998 999999999999999999999999999999998763
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+|+++|.++..+|++++|+.+|+++++++|+.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 689999999999999999999999999988863
No 5
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.85 E-value=1.2e-20 Score=143.08 Aligned_cols=105 Identities=20% Similarity=0.189 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc------------------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------------------GTMVSPTVYARRCLSYLMNDMPQEALGDAM 205 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 205 (251)
..+..++++|+.+++.|+|++|+..|++++++ +|. +..+|+++|.||+.+|+|++|+.+|.
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 45889999999999999999999999999999 666 77899999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 206 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 206 ~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|+.++|+++++|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 88 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 88 EVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999864
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.5e-20 Score=134.31 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
..++.++.+|..+++.|+|++|+..|+++++++|. ++.+|+++|.+++.+|++++|+.+|+++++++|+++.+|+.+|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45788999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhh
Q 025537 224 CLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P 246 (251)
++..+|++++|+.+|+++++++|
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999993
No 7
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.82 E-value=5.1e-20 Score=138.29 Aligned_cols=107 Identities=12% Similarity=0.123 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.++.+..++..|..+++.|+|++|+.+|+++|+++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+.+
T Consensus 27 ~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 27 PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 6677888999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHH-HHHHHhhhhhcc
Q 025537 222 AACLFSLGMENDARET-LKDGTNLEAKKN 249 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~-~~~al~l~P~~~ 249 (251)
|.+|..+|++++|... ++++++++|++.
T Consensus 106 a~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 106 AELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 9999999999887776 589999999863
No 8
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.82 E-value=2.1e-19 Score=134.66 Aligned_cols=106 Identities=11% Similarity=0.052 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|++++..+|. ++.+|+++|.++..+|+|++|+..|++|+.++|+++.+|+.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 5677889999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+.+|+++++++|++
T Consensus 96 g~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 96 AECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 999999999999999999999999974
No 9
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.82 E-value=3.9e-19 Score=134.84 Aligned_cols=105 Identities=27% Similarity=0.365 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
..+..++..|..++..|+|++|+.+|+++++++|. ++.+|+++|.+|+.+|+|++|+.+|+++++++|+++.+|+.+|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 224 CLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|..+|++++|+.+|+++++++|++.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999875
No 10
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.81 E-value=6.3e-19 Score=130.74 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|++++..+|. ++.+|+++|.++..+|++++|+..|++|+.++|+++.+++.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 4566888999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+.+|+++++++|++
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999965
No 11
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.79 E-value=1.1e-18 Score=126.16 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=92.5
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
.+...|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..+++|++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhcc
Q 025537 228 LGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 228 ~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|++++|+..|+++++++|++.
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999864
No 12
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.77 E-value=1.1e-17 Score=122.37 Aligned_cols=103 Identities=21% Similarity=0.407 Sum_probs=99.8
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|+|++|+.+|+++++.+|. ++.+|+++|.+++.+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 3678899999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+..+|++++|+..|+++++++|+.
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhH
Confidence 999999999999999999999983
No 13
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.75 E-value=6.7e-18 Score=156.31 Aligned_cols=113 Identities=12% Similarity=0.017 Sum_probs=103.7
Q ss_pred hhhhhHH-HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 025537 135 SFQMWTS-QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 213 (251)
Q Consensus 135 ~~~~~~~-~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 213 (251)
.++...+ ++..+..+.++|..+.+.|++++|+.+|++||+++|+ ++.+|+++|.++..+|++++|+..|++|++++|+
T Consensus 31 ~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~ 109 (723)
T 4gyw_A 31 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA 109 (723)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3444444 5667889999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 214 WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 214 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
++.+|+++|.+|..+|++++|+.+|++|++++|++
T Consensus 110 ~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 110 FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999975
No 14
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.75 E-value=7.2e-18 Score=133.14 Aligned_cols=102 Identities=20% Similarity=0.090 Sum_probs=82.8
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYAR----------------RCLSYLMNDMPQEALGDAMQAQV 209 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 209 (251)
++.+..+|..++..|+|++|+..|+++++.+|+ ++.+|+. +|.+|..+|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 556677788888888888888888888888887 7777777 88888888888888888888888
Q ss_pred hCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 210 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 210 ~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
++|+++.+|+.+|.++..+|++++|+.+|+++++++|++
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 888888888888888888888888888888888888865
No 15
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.75 E-value=2.3e-17 Score=139.87 Aligned_cols=106 Identities=11% Similarity=0.105 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQ 206 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 206 (251)
.+..+..++..|+.+++.|+|++|+.+|++|++++|. + ..+|+++|.+|+++|+|++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 6778999999999999999999999999999999998 6 69999999999999999999999999
Q ss_pred HHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 207 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 207 al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999999999999999999975
No 16
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.74 E-value=1.4e-17 Score=154.06 Aligned_cols=106 Identities=11% Similarity=0.016 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.|..++.+.++|+.+.++|+|++|+.+|++||+++|+ ++.+|+++|.+|.++|++++|+..|++|++++|+++.+|+++
T Consensus 5 ~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 5 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3567899999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+++|+++++++|++
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999985
No 17
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=2.1e-17 Score=145.77 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQ 206 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 206 (251)
.+..+..++++|+.+++.|+|++|+.+|++|++++|. + ..+|+|+|.||+++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6678999999999999999999999999999999998 6 69999999999999999999999999
Q ss_pred HHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 207 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 207 al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|++++|+++++|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999864
No 18
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.74 E-value=4.8e-17 Score=127.00 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH----------------HHHHHHHHHHHhcCCHHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----------------TVYARRCLSYLMNDMPQEALGDAM 205 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~~~ 205 (251)
.+..+..+...|..++..|+|++|+..|.+++++.|. ++ .+|.++|.+++.+|+|++|+.+|+
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4566889999999999999999999999999999987 65 899999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 206 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 206 ~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+++.++|+++.+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999999999999975
No 19
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.73 E-value=8.8e-17 Score=113.49 Aligned_cols=103 Identities=24% Similarity=0.390 Sum_probs=99.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.++..+|++++|+..+++++.++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4678899999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+..+|++++|...|+++++++|++
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999975
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-16 Score=115.72 Aligned_cols=104 Identities=21% Similarity=0.278 Sum_probs=99.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..++..|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3677889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+..+|++++|+..|+++++++|++.
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCch
Confidence 9999999999999999999999863
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.73 E-value=5.6e-17 Score=124.67 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..+...++++.|+..+.++++.+|. +..++..+|.+|..+|++++|+..|+++++++|+++.+|+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l 147 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSI 147 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHH
Confidence 3445778889999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+.+|++|++++|++
T Consensus 148 g~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 148 GLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999985
No 22
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.72 E-value=5.1e-18 Score=127.25 Aligned_cols=97 Identities=11% Similarity=-0.080 Sum_probs=90.3
Q ss_pred HHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCH
Q 025537 152 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 231 (251)
Q Consensus 152 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~ 231 (251)
.|..+..+|++++|+..|.+++..+|. ++..++++|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888899999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcc
Q 025537 232 NDARETLKDGTNLEAKKN 249 (251)
Q Consensus 232 ~~A~~~~~~al~l~P~~~ 249 (251)
++|+.+|+++++++|++.
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999863
No 23
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.72 E-value=6.3e-17 Score=133.73 Aligned_cols=103 Identities=21% Similarity=0.408 Sum_probs=100.0
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..++..|+.++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 677899999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 226 FSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..+|++++|+..|+++++++|++.
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHhCccch
Confidence 999999999999999999999863
No 24
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.72 E-value=3.1e-17 Score=130.32 Aligned_cols=103 Identities=14% Similarity=0.209 Sum_probs=99.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 82 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEA 82 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3567889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhC-----------CCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSL-----------GMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~-----------~~~~~A~~~~~~al~l~P~~ 248 (251)
+..+ |++++|+..|+++++++|++
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 83 YVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 9999 99999999999999999985
No 25
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.72 E-value=8.4e-18 Score=126.03 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=85.5
Q ss_pred hhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 158 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMP----------QEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 158 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
+.+.|++|+..|.++++++|. ++.+|+++|.++..++++ ++|+..|++||+++|+++.+|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 457899999999999999999 999999999999999876 599999999999999999999999999998
Q ss_pred CC-----------CHHHHHHHHHHHHhhhhhcc
Q 025537 228 LG-----------MENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 228 ~~-----------~~~~A~~~~~~al~l~P~~~ 249 (251)
+| +|++|+++|++|++++|++.
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 85 89999999999999999863
No 26
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.72 E-value=1.8e-17 Score=142.92 Aligned_cols=106 Identities=7% Similarity=-0.047 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhHHHhhcC-HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKD-FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 220 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 220 (251)
++..+..+..+|..+...|+ |++|+.+|+++|+++|+ +..+|+++|.++..+|++++|+.+|++||+++|+++.+|++
T Consensus 127 ~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~ 205 (382)
T 2h6f_A 127 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 205 (382)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHH
Confidence 66778899999999999996 99999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 221 QAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 221 ~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+|.++..+|++++|+.+|+++|+++|++
T Consensus 206 lg~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 206 RQWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999975
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.71 E-value=2.9e-16 Score=117.91 Aligned_cols=105 Identities=26% Similarity=0.374 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
...+..+...|..++..|+|++|+..|.++++.+|. +..+++++|.++..+|++++|+..+++++.++|+++.+++.+|
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 355888999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++..+|++++|+..|+++++++|++
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999975
No 28
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.9e-16 Score=116.69 Aligned_cols=103 Identities=23% Similarity=0.242 Sum_probs=98.5
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..++..|..++..|+|++|+.+|+++++.+|+ + ..+|.++|.+++.+|++++|+..+++++.++|+++.+++.+|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 567789999999999999999999999999997 6 899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.++..+|++++|+.+|+++++++|++.
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 999999999999999999999999753
No 29
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.71 E-value=4.3e-16 Score=111.81 Aligned_cols=106 Identities=19% Similarity=0.262 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|.++++.+|. +..++.++|.++..+|++++|+..+.+++.++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 3556888999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.++..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999975
No 30
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.71 E-value=1.3e-16 Score=125.79 Aligned_cols=106 Identities=9% Similarity=-0.002 Sum_probs=97.2
Q ss_pred HHHHHHHHHH----------------HHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 025537 142 QMQETLNSKK----------------HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAM 205 (251)
Q Consensus 142 ~~~~a~~~~~----------------~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 205 (251)
.|..+..+.. .|..++..|+|++|+..|+++++++|+ +..+|+++|.++..+|++++|+..|+
T Consensus 34 ~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~ 112 (208)
T 3urz_A 34 NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYE 112 (208)
T ss_dssp CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5666777777 999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhC-----------------------------------CCHHHHHHHHHHHHhhhhhc
Q 025537 206 QAQVVSPDWPTALYLQAACLFSL-----------------------------------GMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 206 ~al~~~p~~~~~~~~~g~~~~~~-----------------------------------~~~~~A~~~~~~al~l~P~~ 248 (251)
++++++|+++.+|+.+|.+|+.. |+|++|+.+|+++++++|+.
T Consensus 113 ~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 113 KILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 99999999999998888876443 46899999999999999974
No 31
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.70 E-value=1.6e-16 Score=114.74 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=95.4
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC---hHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTALYLQ 221 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~ 221 (251)
.++..|..++..|+|++|+..|+++++.+|+ +. .+++++|.+++.+|++++|+..+++++..+|++ +.+++.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4678899999999999999999999999997 66 799999999999999999999999999999999 8999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.++..+|++++|+..|+++++..|++
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999975
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.70 E-value=1.3e-16 Score=126.71 Aligned_cols=105 Identities=13% Similarity=0.038 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhHHHhh-----------cCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 025537 142 QMQETLNSKKHGDTAFRA-----------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV 210 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 210 (251)
+|..+..+...|..+... |++++|+..|+++++++|+ ++.+|.++|.++..+|++++|+..|++|+++
T Consensus 69 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 69 TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALAL 147 (217)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 566788899999999999 9999999999999999998 9999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 211 SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 211 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+ +++.+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 148 ~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 148 E-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp C-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred c-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9 999999999999999999999999999999999975
No 33
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.70 E-value=5.4e-17 Score=137.68 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH-----------------HHHHHHHHHHHhcCCHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP-----------------TVYARRCLSYLMNDMPQEALGDA 204 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~ 204 (251)
.+..+..++.+|+.+++.|+|++|+.+|++|+++.|. +. .+|+++|.||+++|+|++|+.+|
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~ 253 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHC 253 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 5667899999999999999999999999999999986 55 38999999999999999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 205 MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 205 ~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
++|++++|+++++|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 254 ~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 254 NIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999999999999999999999999864
No 34
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.70 E-value=1e-16 Score=138.24 Aligned_cols=106 Identities=13% Similarity=-0.055 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhCCCChHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYL 220 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~ 220 (251)
.+..+..+...|..+...|++++|+..|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|++|+.++|+++.+|++
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 4667889999999999999999999999999999998 99999999999999997 999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 221 QAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 221 ~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+|.++..+|++++|+.+|+++|+++|++
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccC
Confidence 9999999999999999999999999986
No 35
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.70 E-value=1.5e-16 Score=146.75 Aligned_cols=102 Identities=11% Similarity=-0.073 Sum_probs=69.5
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
++..+..+|..++..|+|++|+..|++|++++|+ ++.+|+++|.++..+|++++ +..|++|++++|+++.+|+++|.+
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~ 543 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARA 543 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHH
Confidence 4556666666666666666666666666666666 66666666666666666666 666666666667777777777777
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+..+|++++|+.+|+++++++|++
T Consensus 544 ~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 544 RSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHHcCCHHHHHHHHHhhcccCccc
Confidence 777777777777777777776654
No 36
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.70 E-value=1.5e-16 Score=136.57 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHc----------------cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID----------------GGTMVSPTVYARRCLSYLMNDMPQEALGDAM 205 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 205 (251)
....+..++..|+.+++.|+|++|+.+|++|++ .+|. +..+|+++|.+|+++|+|++|+.+|+
T Consensus 219 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~~~ 297 (370)
T 1ihg_A 219 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCL 297 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 455688899999999999999999999999998 7776 88999999999999999999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 206 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 206 ~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+|++++|+++++|+++|.+|..+|++++|+.+|+++++++|++
T Consensus 298 ~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 298 EALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999975
No 37
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.69 E-value=3.2e-16 Score=124.66 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=98.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
+..++..|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 47788999999999999999999999999998 6 889999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|..+|++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999853
No 38
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.68 E-value=4.2e-16 Score=109.04 Aligned_cols=102 Identities=14% Similarity=0.057 Sum_probs=96.9
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC--ChHHHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD--WPTALYLQAAC 224 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~g~~ 224 (251)
..+...|..++..|+|++|+.+|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+ ++.+++.+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADA 85 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHH
Confidence 34557899999999999999999999999998 9999999999999999999999999999999999 99999999999
Q ss_pred HHhC-CCHHHHHHHHHHHHhhhhhcc
Q 025537 225 LFSL-GMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 225 ~~~~-~~~~~A~~~~~~al~l~P~~~ 249 (251)
+..+ |++++|+.+|+++++.+|...
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 86 LRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 9999 999999999999999999764
No 39
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.67 E-value=5e-16 Score=111.61 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-------hH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PT 216 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 216 (251)
+.+..+...|..++..|+|++|+.+|.++++.+|. +..+++++|.++..+|++++|+..+++++.+.|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 34778899999999999999999999999999998 99999999999999999999999999999999887 99
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 217 ALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 217 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+++.+|.++..+|++++|+..|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
No 40
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.67 E-value=7.6e-17 Score=115.40 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=82.1
Q ss_pred hhcCHHHHHHHHHHHHcc---CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHH
Q 025537 158 RAKDFSTAIDCYTQFIDG---GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDA 234 (251)
Q Consensus 158 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A 234 (251)
..|+|++|+.+|++++++ +|. +..+|+++|.+|..+|+|++|+..++++++++|+++.+++.+|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 368999999999999999 687 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhc
Q 025537 235 RETLKDGTNLEAKK 248 (251)
Q Consensus 235 ~~~~~~al~l~P~~ 248 (251)
+..|+++++++|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999999875
No 41
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.67 E-value=1.3e-15 Score=116.90 Aligned_cols=112 Identities=18% Similarity=0.143 Sum_probs=97.1
Q ss_pred hhhhHH-HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 025537 136 FQMWTS-QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 136 ~~~~~~-~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 214 (251)
++.... +|..+..+...|..++..|++++|+..+.+++..+|. +..++.++|.++...++++.|+..+.+++.++|++
T Consensus 28 ~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~ 106 (184)
T 3vtx_A 28 YKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVY 106 (184)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 343333 6667888888888888888888888888888888887 88888888888888899999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchh
Confidence 9999999999999999999999999999999975
No 42
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.65 E-value=6.3e-15 Score=104.75 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+...|..++..|++++|+..|.++++.+|. +..+++++|.++...|++++|+..+++++..+|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 567788999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhc
Q 025537 226 FSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
...|++++|+..|+++++++|++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999975
No 43
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.64 E-value=1.7e-15 Score=115.72 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHhhCCCChHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMP--QEALGDAMQAQVVSPDWPTAL 218 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~~~p~~~~~~ 218 (251)
.+..+..+...|..++..|+|++|+.+|.++++++|. ++.++.++|.+ +...|++ ++|+..+++++.++|+++.++
T Consensus 40 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 40 NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 3445778899999999999999999999999999998 99999999999 8899999 999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 219 YLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+.+|.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999999864
No 44
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.64 E-value=3e-15 Score=118.94 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=98.5
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh-------H
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-------T 216 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 216 (251)
.+...+...|..++..|+|++|+.+|+++++.+|. +..+|.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 44567778999999999999999999999999998 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 217 ALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 217 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+|+.+|.++..+|++++|+..|+++++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999998
No 45
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.64 E-value=3.8e-15 Score=116.83 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=97.8
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh----------
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP---------- 215 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 215 (251)
+..+...|..++..|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 567889999999999999999999999999998 999999999999999999999999999999888877
Q ss_pred ------HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 ------TALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999975
No 46
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.62 E-value=8.4e-15 Score=118.71 Aligned_cols=105 Identities=11% Similarity=-0.021 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+...|..++..|+|++|+.+|+++++.+|. +..+|.++|.++..+|++++|+..+++++.++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456888999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++..+|++++|+..|+++++++|++
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999975
No 47
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.62 E-value=5.7e-16 Score=137.30 Aligned_cols=105 Identities=26% Similarity=0.368 Sum_probs=100.1
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
+.+..+..+|..+++.|+|++|+.+|++|++++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44667788899999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 224 CLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|..+|++++|+..|+++++++|++.
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999864
No 48
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.8e-16 Score=110.40 Aligned_cols=95 Identities=15% Similarity=0.236 Sum_probs=89.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC------hHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PTAL 218 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~ 218 (251)
.+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 3678899999999999999999999999999998 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHH
Q 025537 219 YLQAACLFSLGMENDARETLKD 240 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~ 240 (251)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999988877664
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.7e-14 Score=115.55 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|+++++.+|. ++.+|.++|.++..+|++++|+..++++++++|+++.+|+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 213 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRK 213 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 4567889999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhh
Q 025537 222 AACLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P 246 (251)
|.++..+|++++|+..|+++++++|
T Consensus 214 ~~~~~~~g~~~~A~~~~~~a~~~~~ 238 (258)
T 3uq3_A 214 ATAQIAVKEYASALETLDAARTKDA 238 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCh
Confidence 9999999999999999999999993
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.59 E-value=1.9e-14 Score=112.80 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=94.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
++..++..|..++..|+|++|+..|++++ +| ++.+|+++|.+|..+|++++|+..|++++.++|+++.+|+.+|.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 46678899999999999999999999996 43 688999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+..+|++++|+.+|++++++.|++.
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHcccHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999998754
No 51
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.59 E-value=6.9e-15 Score=106.87 Aligned_cols=90 Identities=14% Similarity=0.076 Sum_probs=82.3
Q ss_pred hhhhhHH-HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 025537 135 SFQMWTS-QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 213 (251)
Q Consensus 135 ~~~~~~~-~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 213 (251)
.++.... +|..+..+..+|..++..|+|++|+..|+++|+++|+ +..+|+++|.++..+|++++|+.+|+++++++|+
T Consensus 35 ~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~ 113 (126)
T 4gco_A 35 HYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPS 113 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcC
Confidence 3444333 6677899999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHH
Q 025537 214 WPTALYLQAACL 225 (251)
Q Consensus 214 ~~~~~~~~g~~~ 225 (251)
++.++..++.++
T Consensus 114 ~~~a~~~l~~~l 125 (126)
T 4gco_A 114 NEEAREGVRNCL 125 (126)
T ss_dssp CHHHHHHHHHHC
T ss_pred CHHHHHHHHHhc
Confidence 999999998764
No 52
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.58 E-value=1.6e-14 Score=117.33 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=97.8
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC---hHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTAL 218 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~ 218 (251)
.+..++.+|..+++.|+|++|+..|+++++..|. + ..+++++|.+|+.+|+|++|+..|++++++.|++ +.++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 3678899999999999999999999999999998 7 8999999999999999999999999999998854 6899
Q ss_pred HHHHHHHHh--------CCCHHHHHHHHHHHHhhhhhcc
Q 025537 219 YLQAACLFS--------LGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 219 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+.+|.++.. +|++++|+..|+++++++|++.
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 999999999 9999999999999999999864
No 53
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.58 E-value=1.3e-15 Score=114.40 Aligned_cols=84 Identities=7% Similarity=-0.235 Sum_probs=79.8
Q ss_pred HHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 165 AIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 165 A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
+-..|.++++++|+ +..+++++|.+++++|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+.+|++++++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34568889999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc
Q 025537 245 EAKKN 249 (251)
Q Consensus 245 ~P~~~ 249 (251)
+|++.
T Consensus 100 ~P~~~ 104 (151)
T 3gyz_A 100 GKNDY 104 (151)
T ss_dssp SSSCC
T ss_pred CCCCc
Confidence 99863
No 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.57 E-value=1.7e-15 Score=139.83 Aligned_cols=104 Identities=9% Similarity=-0.081 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+..+|..++..|+|++|+..|+++++.+|+ +..+|+++|.+++.+|++++|+..|++|++++|+++.+|+.+|
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg 508 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALA 508 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 344677889999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++..+|++++ +.+|+++++++|++
T Consensus 509 ~~~~~~g~~~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 509 ATAELAGNTDE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp HHHHHHTCCCT-TCHHHHHHHHCTTC
T ss_pred HHHHHcCChHH-HHHHHHHHHhCCch
Confidence 99999999999 99999999999985
No 55
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.57 E-value=2.7e-14 Score=101.46 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 025537 163 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGT 242 (251)
Q Consensus 163 ~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 242 (251)
++|+..|.++++.+|. ++.+|+++|.+|+.+|++++|+..|++++.++|+++.+|+.+|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3688999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcc
Q 025537 243 NLEAKKN 249 (251)
Q Consensus 243 ~l~P~~~ 249 (251)
+++|+..
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999753
No 56
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.56 E-value=1.3e-13 Score=98.92 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
....+...|..++..|++++|+..|.++++..|. +..+++++|.++...|++++|+..+++++...|+++.+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567788899999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+...|++++|...|+++++++|++
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999863
No 57
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.55 E-value=4.5e-14 Score=119.66 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=99.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..+...|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5778899999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|..+|++++|+..|+++++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999984
No 58
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.55 E-value=5.4e-14 Score=119.12 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=98.6
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+...|..+++.|+|++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..|++++.++|+++.+|+.+|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 445778899999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 226 FSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..+|++++|+..|+++++++|++.
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HccccHHHHHHHHHHHHHhCccch
Confidence 999999999999999999999853
No 59
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.55 E-value=4.4e-14 Score=127.39 Aligned_cols=105 Identities=10% Similarity=-0.015 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+...|..+...|++++|+.+|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|+++.+++.+|
T Consensus 54 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 132 (568)
T 2vsy_A 54 PGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLL 132 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 344556666666666666666666666666666665 6666666666666666666666666666666666666666666
Q ss_pred HHHHhC---CCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSL---GMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~---~~~~~A~~~~~~al~l~P~~ 248 (251)
.++..+ |++++|...|+++++++|++
T Consensus 133 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 133 NWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 666666 66666666666666666654
No 60
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.55 E-value=5.8e-14 Score=117.56 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=98.6
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
+++.+...|..++..|+|++|+..|+++++.+|. ++.+++++|.+++.+|++++|+..++++++++|+++.+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4678899999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhh
Q 025537 225 LFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P 246 (251)
+...|++++|+..|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999
No 61
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=1.4e-13 Score=104.31 Aligned_cols=106 Identities=13% Similarity=0.070 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+...|..++..|++++|+..|.++++.+|. +..++..+|.++..+|++++|+..+++++...|+++.+++.+|
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 73 PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 344677889999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.++..+|++++|...|+++++++|++.
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 152 FSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999999999864
No 62
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=4.8e-14 Score=112.28 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=95.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChH---HHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT---ALY 219 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~ 219 (251)
+..++.+|..++..|+|++|+..|+++++..|. + ..+++++|.+|+.+|+|++|+..|+++++.+|+++. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 567889999999999999999999999999886 4 478999999999999999999999999999999875 899
Q ss_pred HHHHHHHh------------------CCCHHHHHHHHHHHHhhhhhcc
Q 025537 220 LQAACLFS------------------LGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 220 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.+|.++.. .|++++|+..|+++++.+|++.
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6799999999999999999864
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.55 E-value=1.2e-13 Score=99.11 Aligned_cols=101 Identities=17% Similarity=0.225 Sum_probs=96.3
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 226 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 226 (251)
..+...|..++..|++++|+..|.++++.+|. +..++.++|.++...|++++|+..+++++...|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 45678899999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred hCCCHHHHHHHHHHHHhhhhhc
Q 025537 227 SLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 227 ~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..|++++|+..|+++++++|++
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999864
No 64
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.54 E-value=2.6e-14 Score=98.62 Aligned_cols=91 Identities=16% Similarity=0.120 Sum_probs=85.6
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC
Q 025537 150 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 228 (251)
Q Consensus 150 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 228 (251)
.++|..++..|+|++|+..|+++++.+|. +.. +|+++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 57899999999999999999999999998 899 99999999999999999999999999999999998865
Q ss_pred CCHHHHHHHHHHHHhhhhhcc
Q 025537 229 GMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 229 ~~~~~A~~~~~~al~l~P~~~ 249 (251)
+.+.+|+..|++++.++|++.
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 678999999999999999865
No 65
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.53 E-value=9e-14 Score=120.72 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHH
Q 025537 141 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 220 (251)
Q Consensus 141 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 220 (251)
..+..+..+...|..+++.|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 35667889999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 221 QAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 221 ~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+|.+|..+|++++|+..|+++++++|++
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999975
No 66
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.1e-13 Score=121.90 Aligned_cols=104 Identities=21% Similarity=0.228 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
...+..++.+|+.+++.|+|++|+..|+++++.+| ++.+|.++|.+++.+|++++|+..++++++++|+++.+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 35688999999999999999999999999999998 5899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++..+|++++|+..|+++++++|.+
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999853
No 67
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.53 E-value=1.5e-14 Score=127.95 Aligned_cols=102 Identities=13% Similarity=0.043 Sum_probs=90.2
Q ss_pred HHHHHHHHhHHHhh---------cCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc--------CCHHHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRA---------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN--------DMPQEALGDAMQAQ 208 (251)
Q Consensus 146 a~~~~~~g~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 208 (251)
+..+...|..++.. |+|++|+..|+++++++|+ ++.+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 46778888888888 8899999999999999888 888899999999888 88999999999999
Q ss_pred hhCC---CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 209 VVSP---DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 209 ~~~p---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+++| +++.+|+.+|.+|..+|++++|+.+|+++++++|++
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999 889999999999999999999999999999988875
No 68
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=5.7e-14 Score=120.09 Aligned_cols=99 Identities=13% Similarity=0.028 Sum_probs=49.0
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
.+...|..++..|++++|+..|.++++.+|+ +..++.++|.++..+|++++|+..|.+++..+|+++.+|+.+|.++..
T Consensus 103 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 181 (388)
T 1w3b_A 103 GYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 181 (388)
T ss_dssp HHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444 444444444444445555555555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHhhhhh
Q 025537 228 LGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 228 ~~~~~~A~~~~~~al~l~P~ 247 (251)
.|++++|+..|+++++++|+
T Consensus 182 ~g~~~~A~~~~~~al~~~p~ 201 (388)
T 1w3b_A 182 QGEIWLAIHHFEKAVTLDPN 201 (388)
T ss_dssp TTCHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHhcCCC
Confidence 55555555555555555554
No 69
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.52 E-value=4.8e-14 Score=107.90 Aligned_cols=106 Identities=13% Similarity=-0.007 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhhCCCChHHHH
Q 025537 141 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQVVSPDWPTALY 219 (251)
Q Consensus 141 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~ 219 (251)
.+|..+..+...|..+...|++++|+..|+++++.+| ++..+..++.+.+ ..+...+|+..++++++++|+++.+++
T Consensus 35 ~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~ 112 (176)
T 2r5s_A 35 ELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELAC 112 (176)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHH
T ss_pred HCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHH
Confidence 3777889999999999999999999999999999988 4555555554432 333445689999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 220 LQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 220 ~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+|.++...|++++|+..|+++++++|+.
T Consensus 113 ~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 113 ELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999875
No 70
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.52 E-value=1.5e-13 Score=116.06 Aligned_cols=103 Identities=16% Similarity=0.216 Sum_probs=100.0
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4778889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999986
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.52 E-value=3.1e-13 Score=102.45 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=98.3
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|++++|+.+|.++++.+|. +..++.++|.++...|++++|+..+++++...|+++.+++.+|.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 3567788999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+...|++++|+..|+++++++|++
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHcCcHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999864
No 72
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.52 E-value=6.1e-14 Score=124.36 Aligned_cols=106 Identities=25% Similarity=0.295 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
....++.+..+|..+++.|+|++|+..|+++++.+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+++.+
T Consensus 21 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 99 (537)
T 3fp2_A 21 RQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRR 99 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 3456899999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|.++..+|++++|+..|+ ++.++|+..
T Consensus 100 a~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 100 ASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 999999999999999995 999888753
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.51 E-value=1.2e-13 Score=109.88 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
.....+...|..++..|++++|+..|.++++.+|. +..++.++|.++...|++++|+..+++++..+|+++.+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34667889999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 224 CLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
++..+|++++|+..|+++++++|++.
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchH
Confidence 99999999999999999999999863
No 74
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.51 E-value=2e-13 Score=116.63 Aligned_cols=99 Identities=15% Similarity=0.070 Sum_probs=47.8
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
.+...|..+.+.|++++|+..|+++++.+|. +..+|.++|.++...|++++|+..++++++++|+++.+++.+|.++..
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 351 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQ 351 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444 444444444444444444444444444444444444444444444444
Q ss_pred CCCHHHHHHHHHHHHhhhhh
Q 025537 228 LGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 228 ~~~~~~A~~~~~~al~l~P~ 247 (251)
.|++++|+..|+++++++|+
T Consensus 352 ~g~~~~A~~~~~~a~~~~p~ 371 (388)
T 1w3b_A 352 QGKLQEALMHYKEAIRISPT 371 (388)
T ss_dssp TTCCHHHHHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHhhCCC
Confidence 44444444444444444443
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.51 E-value=8.3e-14 Score=123.23 Aligned_cols=103 Identities=10% Similarity=0.111 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHhhCC
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN---------DMPQEALGDAMQAQVVSP 212 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~---------~~~~~A~~~~~~al~~~p 212 (251)
.+..+..+...|..++..|+|++|+.+|+++++++|+ ..++.++|.++..+ |++++|+..|++|++++|
T Consensus 133 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 210 (474)
T 4abn_A 133 EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV 210 (474)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC
Confidence 5566889999999999999999999999999999986 69999999999999 999999999999999999
Q ss_pred CChHHHHHHHHHHHhC--------CCHHHHHHHHHHHHhhhh
Q 025537 213 DWPTALYLQAACLFSL--------GMENDARETLKDGTNLEA 246 (251)
Q Consensus 213 ~~~~~~~~~g~~~~~~--------~~~~~A~~~~~~al~l~P 246 (251)
+++.+|+.+|.+|..+ |++++|+.+|+++++++|
T Consensus 211 ~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 252 (474)
T 4abn_A 211 LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR 252 (474)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG
T ss_pred CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC
Confidence 9999999999999999 999999999999999999
No 76
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.50 E-value=2.9e-13 Score=114.31 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+...|..++..|+|++|+..|+++++.+|. +..+|.++|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345668899999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 226 FSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..+|++++|+..|+++++++|++.
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999999754
No 77
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.50 E-value=2e-13 Score=112.93 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=90.7
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHH----------------------
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL---------------------- 201 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~---------------------- 201 (251)
...+.+...|..+...|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+
T Consensus 115 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~ 193 (287)
T 3qou_A 115 REEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQI 193 (287)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHH
Confidence 34567778888888888888888888888888888 8888888888888888888765
Q ss_pred ------------HHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 202 ------------GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 202 ------------~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|++
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 44566688899999999999999999999999999999999999986
No 78
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.50 E-value=1.4e-13 Score=95.58 Aligned_cols=74 Identities=18% Similarity=0.162 Sum_probs=66.0
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 175 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 175 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.+|+ ++.+|+++|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|++.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 3677 8999999999999999999999999999999999999999999999999999999999999999988754
No 79
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.9e-13 Score=108.27 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=93.8
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHc--------------------------cCCCCCHHHHHHHHHHHHhcCCHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFID--------------------------GGTMVSPTVYARRCLSYLMNDMPQE 199 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~--------------------------~~p~~~~~~~~~~a~~~~~~~~~~~ 199 (251)
+..+...|..+...|++++|+..|.++++ .+|. ++.++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 67777888888888888888888888887 6776 78899999999999999999
Q ss_pred HHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 200 ALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 200 A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999999999999999975
No 80
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.49 E-value=2e-13 Score=110.69 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=96.1
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC--CHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHhhCCCCh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLM--------NDMPQEALGDAMQAQVVSPDWP 215 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 215 (251)
+..++..|..++..|+|++|+..|+++++..|+. ...+++++|.+++. +|++++|+..|+++++.+|+++
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7789999999999999999999999999998841 46789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 TAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++ +.+|.+|..+|+|++|+..|+++++.+|++
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 766 899999999999999999999999999974
No 81
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.49 E-value=3.7e-14 Score=105.84 Aligned_cols=84 Identities=8% Similarity=-0.046 Sum_probs=79.6
Q ss_pred HHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 165 AIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 165 A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
+-..|.++++++|. +..+++++|.+++..|+|++|+..|++++.++|+++.+|+.+|.++..+|++++|+.+|++++++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 33568899999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc
Q 025537 245 EAKKN 249 (251)
Q Consensus 245 ~P~~~ 249 (251)
+|++.
T Consensus 85 ~p~~~ 89 (148)
T 2vgx_A 85 DIXEP 89 (148)
T ss_dssp STTCT
T ss_pred CCCCc
Confidence 99863
No 82
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.49 E-value=6.6e-13 Score=105.47 Aligned_cols=105 Identities=14% Similarity=0.140 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..+++++..+|+++.+++.+|
T Consensus 88 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 166 (243)
T 2q7f_A 88 SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFG 166 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 344667777788888888888888888888888876 7778888888888888888888888888888888888888888
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.++...|++++|+..|+++++++|++
T Consensus 167 ~~~~~~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 167 MCLANEGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 88888888888888888888877754
No 83
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.49 E-value=5.6e-13 Score=89.85 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=79.5
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|+|++|+.+|.++++.+|. +..+++++|.++..+|++++|+..+++++.++|+++.+++.+|.+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 4677889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHhCC
Q 025537 225 LFSLG 229 (251)
Q Consensus 225 ~~~~~ 229 (251)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88764
No 84
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.48 E-value=1.4e-13 Score=111.58 Aligned_cols=107 Identities=6% Similarity=-0.034 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 219 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 219 (251)
.+..+..+...|..++..|+|++|+..|.++++.. |.....+|.++|.++..+|++++|+..++++++++|+++.+|+
T Consensus 33 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 112 (272)
T 3u4t_A 33 KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYG 112 (272)
T ss_dssp TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHH
Confidence 44556789999999999999999999999999932 2223556999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 220 LQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 220 ~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+|.++..+|++++|+..|+++++++|++
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 99999999999999999999999998875
No 85
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.48 E-value=2.2e-13 Score=110.32 Aligned_cols=100 Identities=14% Similarity=0.085 Sum_probs=55.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|+|++|+.+|+++++.+|. +..+|+++|...+..+++++|+..++++++++|+++.+++.+|.+
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 107 RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 3445555555555555555555555555555555 555555555222223355555555555555555555555555555
Q ss_pred HHhCCC---HHHHHHHHHHHHhhh
Q 025537 225 LFSLGM---ENDARETLKDGTNLE 245 (251)
Q Consensus 225 ~~~~~~---~~~A~~~~~~al~l~ 245 (251)
+..+|+ +++|+..|++++++.
T Consensus 186 ~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 186 NAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHcCcchhhHHHHHHHHHHHHHH
Confidence 555555 555555555555554
No 86
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.48 E-value=6.1e-13 Score=104.16 Aligned_cols=106 Identities=14% Similarity=0.003 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHHHHh--hCCCChHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-DMPQEALGDAMQAQV--VSPDWPTAL 218 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~ 218 (251)
.+..+..+...|..++..|++++|+..|.++++.+|. +..++.++|.++... |++++|+..+++++. .+|..+.++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHH
Confidence 3455778889999999999999999999999999998 899999999999999 999999999999999 667778999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 219 YLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+.+|.++...|++++|+..|+++++++|++
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998874
No 87
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.48 E-value=2.6e-13 Score=122.36 Aligned_cols=106 Identities=15% Similarity=0.045 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4455778899999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|.+|..+|++++|+..|+++++++|++
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999975
No 88
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.48 E-value=1.1e-12 Score=109.69 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=94.6
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
......|..++..|++++|+..|+++++..|+ +. .++.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 313 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRA 313 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 34556799999999999999999999999997 66 45778999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.++..+|++++|+..|+++++++|++.
T Consensus 314 ~~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 314 EAYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999863
No 89
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.47 E-value=3.7e-13 Score=107.88 Aligned_cols=101 Identities=10% Similarity=0.026 Sum_probs=51.7
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh--hCCCChHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV--VSPDWPTALYLQAA 223 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g~ 223 (251)
+..+...|..++..|++++|+..|.++++.+|. +..++.++|.++..+|++++|+..+++++. ..|.++.+++.+|.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 444445555555555555555555555555554 445555555555555555555555555555 44444555555555
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 224 CLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
++...|++++|+..|+++++++|+
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcc
Confidence 555555555555555555554443
No 90
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.47 E-value=4e-13 Score=111.43 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=86.3
Q ss_pred HHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHH-H
Q 025537 156 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMEND-A 234 (251)
Q Consensus 156 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~-A 234 (251)
+...|++++|+..|+++++.+|+ ++.+|+++|.++.++|++++|+..+++|+.++|+++.+++++|.++..+|++++ +
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34458999999999999999998 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHhhhhhc
Q 025537 235 RETLKDGTNLEAKK 248 (251)
Q Consensus 235 ~~~~~~al~l~P~~ 248 (251)
..+++++++++|++
T Consensus 255 ~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 255 NRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 68889999999986
No 91
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.47 E-value=5.1e-13 Score=113.03 Aligned_cols=99 Identities=13% Similarity=0.056 Sum_probs=93.6
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+.+.|..+++.|+|++|+.+|+++++++|. +..+|+++|.+|+.+|++++|+.+|++|++++|+++.+++.+|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 689999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHH-HHHHHHHHhhh
Q 025537 226 FSLGMENDA-RETLKDGTNLE 245 (251)
Q Consensus 226 ~~~~~~~~A-~~~~~~al~l~ 245 (251)
..+|++++| ...|++.+..-
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 55777776543
No 92
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.46 E-value=7e-13 Score=103.83 Aligned_cols=105 Identities=10% Similarity=-0.024 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhHHHhh-cCHHHHHHHHHHHHc--cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHH
Q 025537 143 MQETLNSKKHGDTAFRA-KDFSTAIDCYTQFID--GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 219 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 219 (251)
+..+..+...|..++.. |++++|+..|+++++ ..|. +..++.++|.++..+|++++|+..++++++.+|+++.+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 34567888999999999 999999999999999 6665 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhhhh-hc
Q 025537 220 LQAACLFSLGMENDARETLKDGTNLEA-KK 248 (251)
Q Consensus 220 ~~g~~~~~~~~~~~A~~~~~~al~l~P-~~ 248 (251)
.+|.++..+|++++|+..|+++++++| ++
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 181 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQ 181 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999 54
No 93
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.46 E-value=2.8e-13 Score=112.12 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=91.0
Q ss_pred HHHHHHHHHhHHHhh-cCHHHHHHHHHHHHccCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChH--
Q 025537 145 ETLNSKKHGDTAFRA-KDFSTAIDCYTQFIDGGTMVS-----PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-- 216 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-- 216 (251)
.+..+.+.|..+... |++++|+.+|++|+++.|... ..++.++|.++..+|+|++|+..|++++++.|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 367889999999996 999999999999999977411 567999999999999999999999999999998653
Q ss_pred -----HHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 217 -----ALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 217 -----~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+|+++|.++..+|++++|+.+|+++++++|+..
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 689999999999999999999999999999753
No 94
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.46 E-value=1.2e-12 Score=108.22 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+..+...|..++..|++++|+..|.++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 247 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMA 247 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 335678889999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.++..+|++++|+..|+++++++|+
T Consensus 248 ~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 248 VSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999998
No 95
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.46 E-value=9.6e-13 Score=105.45 Aligned_cols=103 Identities=10% Similarity=-0.097 Sum_probs=59.6
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|++++|+.+|.++++.+|. +..++..+|.++..+|++++|+..++++++..|+++.+++.++.+
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 3445555555555555555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 225 LFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+...|++++|...|+++++++|++
T Consensus 219 ~~~~g~~~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 219 AKVFEDRDTAASYGLQLKRLYPGS 242 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHccCHHHHHHHHHHHHHHCCCC
Confidence 555555555555555555555543
No 96
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.46 E-value=6.9e-13 Score=99.24 Aligned_cols=105 Identities=14% Similarity=0.011 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|.++++.+|. ++.+|+++|.++..+|++++|+..+++++.++|++..++..+
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4455788999999999999999999999999999998 999999999999999999999999999999999999988555
Q ss_pred H--HHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 222 A--ACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 222 g--~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+ ..+...|++++|+..+.++..+.+.
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 4 4488999999999999999877654
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.45 E-value=8e-13 Score=106.94 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh------
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP------ 215 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------ 215 (251)
.+..+..+...|..++..|+|++|+.+|.++++.+|. +..++.++|.++..+|++++|+..++++++++|+++
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (275)
T 1xnf_A 73 RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL 151 (275)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3445778899999999999999999999999999998 899999999999999999999999999999999875
Q ss_pred ----------------------------------------------------------------HHHHHHHHHHHhCCCH
Q 025537 216 ----------------------------------------------------------------TALYLQAACLFSLGME 231 (251)
Q Consensus 216 ----------------------------------------------------------------~~~~~~g~~~~~~~~~ 231 (251)
.+++.+|.++..+|++
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 231 (275)
T 1xnf_A 152 YLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDL 231 (275)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCH
Confidence 5567777777777777
Q ss_pred HHHHHHHHHHHhhhhhc
Q 025537 232 NDARETLKDGTNLEAKK 248 (251)
Q Consensus 232 ~~A~~~~~~al~l~P~~ 248 (251)
++|+..|+++++++|++
T Consensus 232 ~~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 232 DSATALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHhCCchh
Confidence 77777777777777754
No 98
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.45 E-value=1.5e-12 Score=107.80 Aligned_cols=103 Identities=12% Similarity=0.038 Sum_probs=98.1
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+..+|..++..|+|++|+..|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 345678899999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 226 FSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
...|++++|+..|+++++++|++.
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHcCCHHHHHHHHHHHHHhCCccH
Confidence 999999999999999999999864
No 99
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.45 E-value=6.1e-13 Score=96.52 Aligned_cols=70 Identities=10% Similarity=-0.064 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 180 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 180 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.+.++.++|.++++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 5678999999999999999999999999999999999999999999999999999999999999999864
No 100
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.44 E-value=9.2e-13 Score=109.15 Aligned_cols=102 Identities=14% Similarity=-0.015 Sum_probs=68.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 224 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 224 (251)
.+..+...|..++..|++++|+..|.++++..|. +...+..+|.++..+|++++|+..++++++.+|+++.+++.+|.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 124 YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3455666666666666666666666666666665 666666666666666666666666666666666666666666666
Q ss_pred HHhCCCHHHHHHHHHHHHhhhhh
Q 025537 225 LFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+...|++++|+..|++++++.|.
T Consensus 203 ~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 203 AFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHcccHHHHHHHHHHHHHHhhh
Confidence 66666666666666666666654
No 101
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.44 E-value=5.3e-13 Score=110.61 Aligned_cols=106 Identities=14% Similarity=0.071 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC---------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG---------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 213 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 213 (251)
+..+..+...|..++..|++++|+..|+++++.. |. ...++.++|.++..+|++++|+..++++++++|+
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 190 PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3456788899999999999999999999999885 44 6789999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 214 WPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 214 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
++.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 999999999999999999999999999999999753
No 102
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=8.3e-14 Score=106.27 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=85.4
Q ss_pred HhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH-HHhCCCH
Q 025537 153 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-LFSLGME 231 (251)
Q Consensus 153 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~~~~~~~ 231 (251)
+..++..|+|++|+..|.++++.+|. ++.+|+.+|.+|...|++++|+..|++++.++|+++.+++.+|.+ +...|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 34456779999999999999999998 999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHhhhhhc
Q 025537 232 --NDARETLKDGTNLEAKK 248 (251)
Q Consensus 232 --~~A~~~~~~al~l~P~~ 248 (251)
++|+..|+++++++|++
T Consensus 96 ~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTC
T ss_pred chHHHHHHHHHHHHhCCCc
Confidence 99999999999999975
No 103
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.43 E-value=2.7e-12 Score=113.71 Aligned_cols=107 Identities=13% Similarity=0.055 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|+++++.+|. +..+|.++|.++..+|++++|+..++++++.+|+++.+++.+
T Consensus 306 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 384 (537)
T 3fp2_A 306 NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFF 384 (537)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3445778889999999999999999999999999998 889999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|.++...|++++|+..|+++++++|++.
T Consensus 385 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 385 AEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999999998764
No 104
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.43 E-value=2.3e-12 Score=111.73 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=94.0
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
.+...|..++..|++++|+..|+++++.+|. ++ .+|.++|.++.++|++++|+..+++++.++|+++.+|+.+|.
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3455699999999999999999999999997 64 488999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 224 CLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 224 ~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
++..+|++++|+..|+++++++|++
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999999985
No 105
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.43 E-value=1.1e-13 Score=122.51 Aligned_cols=107 Identities=16% Similarity=0.085 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..+++.|+|++|+.+|++|++++|+ ++.+|+++|.+|..+|++++|+..+++|++++|+++.+++.+
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 114 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 114 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4556888999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHH--HHhCCCHHHHHHHHH-----------HHHhhhhhcc
Q 025537 222 AAC--LFSLGMENDARETLK-----------DGTNLEAKKN 249 (251)
Q Consensus 222 g~~--~~~~~~~~~A~~~~~-----------~al~l~P~~~ 249 (251)
+.+ +...|++++|+..|+ ++++++|+..
T Consensus 115 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 115 QECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp HHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 999 899999999999999 8888888754
No 106
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.43 E-value=6.6e-13 Score=109.89 Aligned_cols=106 Identities=8% Similarity=-0.179 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhhCCCC---
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMN-DMPQEALGDAMQAQVVSPDW--- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~--- 214 (251)
..+..+.+.|..+...|+|++|+.+|++|+++.|.. .+.++.++|.+|... |++++|+..|++|+++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 347889999999999999999999999999987631 156899999999995 99999999999999998865
Q ss_pred ---hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 215 ---PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 215 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..++.++|.++..+|+|++|+..|++++++.|++.
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999998753
No 107
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.42 E-value=9.1e-13 Score=104.80 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=92.8
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH---HHHHHHHHHHHh------------------cCCHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLM------------------NDMPQEALGDA 204 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~a~~~~~------------------~~~~~~A~~~~ 204 (251)
...+...|..+++.|+|++|+..|+++++..|+ +. .+++.+|.++.. +|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 567889999999999999999999999999997 54 478999999886 57899999999
Q ss_pred HHHHhhCCCChHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 205 MQAQVVSPDWPTAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 205 ~~al~~~p~~~~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+++++.+|+++.++ +.+|.+|...|++++|+..|+++++..|++
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999998665 678999999999999999999999999975
No 108
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.41 E-value=3.9e-13 Score=99.22 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=75.5
Q ss_pred HHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhh
Q 025537 167 DCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 167 ~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P 246 (251)
..|.++++.+|+ +...++++|.+++..|+|++|+..|++++.++|+++.+|+.+|.++..+|+|++|+.+|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 467888999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcc
Q 025537 247 KKN 249 (251)
Q Consensus 247 ~~~ 249 (251)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 863
No 109
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.39 E-value=8.7e-13 Score=111.68 Aligned_cols=102 Identities=15% Similarity=0.021 Sum_probs=60.3
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH-H
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-L 225 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~ 225 (251)
..+.+.|..+++.|+|++|+.+|+++++++|+ +..+|+++|.+|+.+|+|++|+.+|++|++++|+++.++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 37889999999999999999999999999998 999999999999999999999999999999999999999999998 5
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 226 FSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
...+..+++...|.+++.++|++.
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 566788899999999999999864
No 110
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.38 E-value=6e-12 Score=104.29 Aligned_cols=105 Identities=11% Similarity=-0.026 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHH--HHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRC--LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
...+.+...|..+.+.|++++|+..|+++++.+|+ +.......+ ..+...|++++|+..|+++++.+|+++.+|+.+
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34667889999999999999999999999999997 653333223 333345899999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 222 AACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
|.++..+|++++|+..|+++++++|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999863
No 111
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.37 E-value=3.2e-12 Score=103.26 Aligned_cols=105 Identities=11% Similarity=-0.004 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+...|..++..|+|++|+.+|.++++. +|. ...++.++|.++..+|++++|+..+++++.+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566888999999999999999999999999988 455 7889999999999999999999999999999
Q ss_pred ----CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 211 ----SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 211 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.|....+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~ 202 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEK 202 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 78888999999999999999999999999999987753
No 112
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.37 E-value=4.1e-12 Score=111.05 Aligned_cols=102 Identities=12% Similarity=0.000 Sum_probs=59.0
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccC--------CCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhCCCCh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMND--MPQEALGDAMQAQVVSPDWP 215 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~ 215 (251)
+..+.+.|..++..|+|++|+.+|++++++. +. .+.++.++|.++..+| +|++|+..|++|++++|+++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 3445566666666666666666666665542 12 3455666655555433 46666666666666666666
Q ss_pred HHHHHHHHHHH---hCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 TALYLQAACLF---SLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ~~~~~~g~~~~---~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++.+|.+++ ..+++++|+..|+++++++|++
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 66666665533 3455566666666666666654
No 113
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.35 E-value=6.3e-12 Score=89.46 Aligned_cols=89 Identities=9% Similarity=-0.081 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
++..+..+...|..++..|+|++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..+++++...|+++......
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4677889999999999999999999999999999998 999999999999999999999999999999999999876554
Q ss_pred HHHHHhCCCH
Q 025537 222 AACLFSLGME 231 (251)
Q Consensus 222 g~~~~~~~~~ 231 (251)
..+....+.+
T Consensus 102 ~ai~~~~~~l 111 (117)
T 3k9i_A 102 QAILFYADKL 111 (117)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 114
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.35 E-value=9.6e-12 Score=111.79 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=94.4
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 218 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 218 (251)
++..+...|..+++.|++++|+..|+++++. +|+....+|.+++.++...|++++|+..++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 3567888999999999999999999999987 5541278999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 219 YLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+.+|.+|...|++++|...|+++++++|++.
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999863
No 115
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.34 E-value=5e-12 Score=102.11 Aligned_cols=101 Identities=10% Similarity=-0.027 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+...|..++..|+|++|+.+|.+++++ +|. ...++.++|.+|..+|++++|+..+.+++.+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999987 344 6789999999999999999999999999998
Q ss_pred ----CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 211 ----SPDWPTALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 211 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
+|....+++.+|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5778999999999999999999999999999998
No 116
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=4.8e-12 Score=111.27 Aligned_cols=105 Identities=12% Similarity=0.020 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHH------HHHHHHHHHHh---cCCHHHHHHHHHHHHhhCCCC
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT------VYARRCLSYLM---NDMPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~ 214 (251)
.....+...|..++..|++++|+..|.++++.+|. +.. +|.++|.++.. +|++++|+..+++++.++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 34567888999999999999999999999999886 543 89999999999 999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 215 PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
+.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTME 483 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999999999999753
No 117
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.34 E-value=8.4e-12 Score=103.88 Aligned_cols=102 Identities=11% Similarity=-0.031 Sum_probs=53.1
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
.+..+...|..+...|++++|+..|+++++++|. ++. +|.++|.++.++|++++|+..|++|++.+|....+|...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~ 176 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAAL 176 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 3444555555555555555555555555555554 443 55555555555555555555555555555555555444443
Q ss_pred HHHh-CCCHHHHHHHHHHHHhhhhh
Q 025537 224 CLFS-LGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 224 ~~~~-~~~~~~A~~~~~~al~l~P~ 247 (251)
.... .|++++|...|+++++++|+
T Consensus 177 ~~~~~~~~~~~A~~~~~~al~~~p~ 201 (308)
T 2ond_A 177 MEYYCSKDKSVAFKIFELGLKKYGD 201 (308)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3222 45555555555555555554
No 118
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.33 E-value=7.3e-12 Score=87.40 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 180 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 180 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
++..|+++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 578899999999999999999999999999999999999999999999999999999999999999986
No 119
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.33 E-value=6.8e-12 Score=103.65 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=89.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHcc------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-----
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 214 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 214 (251)
+..+...|..++..|+|++|+.+|.++++. ++.....+++|+|.+|..+|+|++|+..+++|+++.+..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~ 234 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 557899999999999999999999999952 211145689999999999999999999999999987554
Q ss_pred -hHHHHHHHHHHHhCCC-HHHHHHHHHHHHhhhhhc
Q 025537 215 -PTALYLQAACLFSLGM-ENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 -~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~P~~ 248 (251)
+.+|+.+|.+|..+|+ +++|+.+|++|+++....
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 8899999999999994 799999999999887643
No 120
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.33 E-value=8.9e-12 Score=89.45 Aligned_cols=88 Identities=10% Similarity=0.007 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|++++|+.+|+++++.+|. +..+++++|.++..+|++++|+..+++++.++|++..+++.+
T Consensus 46 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 46 NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 3445788999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC
Q 025537 222 AACLFSLGM 230 (251)
Q Consensus 222 g~~~~~~~~ 230 (251)
+.++..+|+
T Consensus 125 ~~~~~~~~~ 133 (133)
T 2lni_A 125 QRCMMAQYN 133 (133)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999988764
No 121
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.33 E-value=5.4e-12 Score=95.08 Aligned_cols=85 Identities=5% Similarity=-0.148 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+.+|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+.+
T Consensus 41 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 119 (164)
T 3sz7_A 41 APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119 (164)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 5566889999999999999999999999999999998 999999999999999999999999999999999999999888
Q ss_pred HHHHHh
Q 025537 222 AACLFS 227 (251)
Q Consensus 222 g~~~~~ 227 (251)
+.+...
T Consensus 120 ~l~~~~ 125 (164)
T 3sz7_A 120 GLETTK 125 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 122
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.32 E-value=7.8e-12 Score=110.08 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=83.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+.++|..+++.|+|++|+.+|+++|+++|+ +..+|+++|.+|+.+|+|++|+.+|++|++++|++..++..++.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 688999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHH
Q 025537 226 FSLGMENDARET 237 (251)
Q Consensus 226 ~~~~~~~~A~~~ 237 (251)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 123
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.32 E-value=1.1e-11 Score=88.35 Aligned_cols=89 Identities=13% Similarity=0.024 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|++++|+.+|.++++.+|. +..+++++|.++..+|++++|+..+++++.++|+++.+++.+
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3445778899999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCH
Q 025537 222 AACLFSLGME 231 (251)
Q Consensus 222 g~~~~~~~~~ 231 (251)
|.++..+|++
T Consensus 121 ~~~~~~~~~~ 130 (131)
T 2vyi_A 121 KIAELKLREA 130 (131)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999886
No 124
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.32 E-value=1.7e-11 Score=93.56 Aligned_cols=83 Identities=13% Similarity=-0.016 Sum_probs=77.7
Q ss_pred cCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHhCCCHHHHHHH
Q 025537 160 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACLFSLGMENDARET 237 (251)
Q Consensus 160 ~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~~~~~~A~~~ 237 (251)
++..+|+..|+++++.+|+ ++.+++++|.++..+|++++|+..+.++++++|++ +.+++.+|.++..+|++++|+..
T Consensus 88 ~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 4455689999999999998 99999999999999999999999999999999987 66999999999999999999999
Q ss_pred HHHHHh
Q 025537 238 LKDGTN 243 (251)
Q Consensus 238 ~~~al~ 243 (251)
|+++|.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 125
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.1e-11 Score=89.06 Aligned_cols=86 Identities=12% Similarity=0.010 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC------CCCh
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS------PDWP 215 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~ 215 (251)
.+..+..+...|..++..|+|++|+..|+++++++|+ +..+|+++|.++..+|++++|+..++++++++ |++.
T Consensus 34 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~ 112 (126)
T 3upv_A 34 APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH
Confidence 4566889999999999999999999999999999998 99999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhC
Q 025537 216 TALYLQAACLFSL 228 (251)
Q Consensus 216 ~~~~~~g~~~~~~ 228 (251)
.++..++.+...+
T Consensus 113 ~~~~~l~~~~~~l 125 (126)
T 3upv_A 113 EIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999988887654
No 126
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=101.05 Aligned_cols=104 Identities=11% Similarity=-0.038 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+...|..++..|++++|+.+|+++++. .|. ...++.++|.+|..+|++++|+..+++++.+
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 556788999999999999999999999999988 555 6788999999999999999999999999984
Q ss_pred ---------------------------------------------CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 211 ---------------------------------------------SPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 211 ---------------------------------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
.|..+.+++.+|.+|..+|++++|+..|++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 46778999999999999999999999999999998
Q ss_pred hh
Q 025537 246 AK 247 (251)
Q Consensus 246 P~ 247 (251)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 86
No 127
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.31 E-value=1.3e-11 Score=82.97 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 176 GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 176 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+|..++.+++++|.++...|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4433678999999999999999999999999999999999999999999999999999999999999999975
No 128
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.30 E-value=7.4e-12 Score=94.15 Aligned_cols=90 Identities=9% Similarity=-0.048 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh-HHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-TALYL 220 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~ 220 (251)
.+..+..+.+.|..+++.|+|++|+..++++|+++|. ++.+|+++|.+|..+|+|++|+.+|++|+.++|+++ .+...
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4456788999999999999999999999999999998 999999999999999999999999999999999998 66777
Q ss_pred HHHHHHhCCCHH
Q 025537 221 QAACLFSLGMEN 232 (251)
Q Consensus 221 ~g~~~~~~~~~~ 232 (251)
++.+...++++.
T Consensus 138 l~~~~~~~~~~~ 149 (162)
T 3rkv_A 138 MKIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 777766655443
No 129
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.30 E-value=9.8e-12 Score=96.59 Aligned_cols=98 Identities=12% Similarity=0.068 Sum_probs=84.3
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+...|..++..|+|++|+.+|+++++++|. +..+++++|.+|..+|++++|+..|++++.++|+++.++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 467889999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHH-HHHHHHHhh
Q 025537 226 FSLGMENDAR-ETLKDGTNL 244 (251)
Q Consensus 226 ~~~~~~~~A~-~~~~~al~l 244 (251)
..+++++++. ..|.+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 9999999888 555555443
No 130
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.30 E-value=2.5e-11 Score=101.07 Aligned_cols=104 Identities=10% Similarity=0.007 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC----
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 214 (251)
..+..+.+.|..+.. |+|++|+.+|++|+++.|.. ...++.++|.+|..+|+|++|+..|++++.+.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 346788899999998 99999999999999987641 15789999999999999999999999999987654
Q ss_pred --hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 215 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 215 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..+++.+|.++..+|++++|+.+|++++ ++|+..
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3588999999999999999999999999 999753
No 131
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.30 E-value=3.5e-11 Score=100.33 Aligned_cols=110 Identities=8% Similarity=-0.027 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHHhHHHhhc--CHHHHHHHHHHHHccCCCCCHHHHHHHHHHH----Hhc---CCHHHHHHHHHHHHh
Q 025537 139 WTSQMQETLNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSY----LMN---DMPQEALGDAMQAQV 209 (251)
Q Consensus 139 ~~~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~ 209 (251)
..-+|.....+..+|..+...+ ++++|+.+++++|..+|+ +..+|+.|+.++ ..+ +++++++..+.++++
T Consensus 60 L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~ 138 (306)
T 3dra_A 60 INELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLS 138 (306)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHH
T ss_pred HHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 3346777889999999999999 999999999999999999 999999999999 777 889999999999999
Q ss_pred hCCCChHHHHHHHHHHHhCCCHH--HHHHHHHHHHhhhhhcc
Q 025537 210 VSPDWPTALYLQAACLFSLGMEN--DARETLKDGTNLEAKKN 249 (251)
Q Consensus 210 ~~p~~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~l~P~~~ 249 (251)
.+|++..+|+.++.++..+|.++ ++++.++++++++|+|.
T Consensus 139 ~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 139 SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999 99999999999999863
No 132
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.30 E-value=2.6e-11 Score=109.52 Aligned_cols=109 Identities=4% Similarity=-0.141 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHhHHHhhcC----------HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHH
Q 025537 140 TSQMQETLNSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND--MPQEALGDAMQA 207 (251)
Q Consensus 140 ~~~~~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~a 207 (251)
..+|+....|..+|..+...|+ +++|+.+|+++++.+|+ +..+|++|+.++.+++ +|++|+..|.++
T Consensus 57 ~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~ 135 (567)
T 1dce_A 57 GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARF 135 (567)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred HHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 3367778899999999999988 99999999999999999 9999999999999999 779999999999
Q ss_pred HhhCCCChHHHHHHHHHHHhCC-CHHHHHHHHHHHHhhhhhcc
Q 025537 208 QVVSPDWPTALYLQAACLFSLG-MENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 208 l~~~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~P~~~ 249 (251)
++++|.+..+|++++.++..+| .+++++++++++++++|++.
T Consensus 136 l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 9999999999999999999999 99999999999999999864
No 133
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.30 E-value=1.6e-11 Score=90.64 Aligned_cols=103 Identities=11% Similarity=0.116 Sum_probs=83.4
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC------
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------ 214 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 214 (251)
+..+...|..++..|+|++|+.+|.+++++.+.. ...++.++|.++..+|++++|+..+++++.+.+..
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 128 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGE 128 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhH
Confidence 3578888999999999999999999988775421 25678888999999999999999999988875433
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++..+|++++|+..|++++++..+.
T Consensus 129 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 129 GRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 4678888999999999999999999998887654
No 134
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.29 E-value=4.8e-12 Score=94.72 Aligned_cols=75 Identities=15% Similarity=-0.028 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhHHHhhcCH----------HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC-----------CHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDF----------STAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----------MPQEA 200 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~-----------~~~~A 200 (251)
+|.+++.+.+.|..+...+++ ++|+..|++||+++|+ +..+|+++|.+|..+| +|++|
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA 110 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLA 110 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHH
Confidence 667799999999999998876 5999999999999999 9999999999999885 89999
Q ss_pred HHHHHHHHhhCCCChHH
Q 025537 201 LGDAMQAQVVSPDWPTA 217 (251)
Q Consensus 201 ~~~~~~al~~~p~~~~~ 217 (251)
+.+|++|++++|++..+
T Consensus 111 ~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 111 TQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCCHHH
Confidence 99999999999998643
No 135
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.29 E-value=8.7e-11 Score=96.93 Aligned_cols=103 Identities=9% Similarity=-0.010 Sum_probs=89.4
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHH---hhCCCCh-
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQ---VVSPDWP- 215 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~~- 215 (251)
....+...|..+...|+|++|+.+|.++++..+.. ...+|+++|.+|..+|+|++|+..+++|+ +..|+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34556678999999999999999999999875431 15689999999999999999999999999 5566643
Q ss_pred ---HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 216 ---TALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 216 ---~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.+++++|.+|..+|+|++|+..|++++++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999999865
No 136
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.29 E-value=1.7e-11 Score=104.75 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----hC
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VS 211 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~ 211 (251)
.+..+..+...|..+...|+|++|+.+|.+|+++.+.. .+.+++++|.+|..+|++++|+..+++|+. .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34457789999999999999999999999999885431 235899999999999999999999999999 46
Q ss_pred -CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 212 -PDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 212 -p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
|..+.+++.+|.++..+|++++|+..|++++++.++.
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 297 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA 297 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 8889999999999999999999999999999997653
No 137
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.29 E-value=3.1e-11 Score=108.49 Aligned_cols=104 Identities=13% Similarity=-0.100 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+.....+...|..+.+.|++++|+..|+++++..|. +..+|..++.+|.+.|++++|+..|+++++++|+++.+|+.+|
T Consensus 404 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 482 (597)
T 2xpi_A 404 PQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELG 482 (597)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 344668888999999999999999999999999998 8899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 223 ACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 223 ~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.+|...|++++|+..|++++++.|+
T Consensus 483 ~~~~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 483 VVAFNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999998654
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.28 E-value=2.6e-11 Score=100.93 Aligned_cols=103 Identities=13% Similarity=0.017 Sum_probs=93.1
Q ss_pred HHHH-HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 144 QETL-NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM-NDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 144 ~~a~-~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
..+. .+...|..+.+.|++++|+..|++|++.+|. +..+|...+...+. +|++++|+..|+++++++|+++.+|..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 209 (308)
T 2ond_A 131 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAY 209 (308)
T ss_dssp SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 3344 7899999999999999999999999999998 88888877766543 7999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhh---hhh
Q 025537 222 AACLFSLGMENDARETLKDGTNL---EAK 247 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~~~~al~l---~P~ 247 (251)
|..+..+|++++|...|+++++. +|+
T Consensus 210 ~~~~~~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 210 IDYLSHLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred HHHHHHCCCHHHHHHHHHHHHhccCCCHH
Confidence 99999999999999999999995 564
No 139
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.28 E-value=3.2e-11 Score=103.33 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+.+.|..+++.|+|++|+.+|+++++++|+ ++.+|+++|.+|..+|++++|+.++++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4566889999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHH
Q 025537 222 AACLFSLGMENDARET 237 (251)
Q Consensus 222 g~~~~~~~~~~~A~~~ 237 (251)
+.++..++++++|...
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888654
No 140
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.28 E-value=1.6e-11 Score=107.35 Aligned_cols=106 Identities=9% Similarity=-0.033 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc-------------------CCHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-------------------DMPQEALG 202 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~ 202 (251)
.+..+..+...|..+...|++++|+..|.++++.+|+ ++.+++++|.+|... +.+++|+.
T Consensus 243 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 321 (472)
T 4g1t_A 243 APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVA 321 (472)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 4455778889999999999999999999999999998 999999999887643 34678888
Q ss_pred HHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 203 DAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 203 ~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++++.++|.++.+++.+|.++..+|++++|+.+|+++++++|+.
T Consensus 322 ~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 322 HLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 8999999999999999999999999999999999999998887753
No 141
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.27 E-value=2.9e-11 Score=99.80 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=89.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHH---ccCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC----
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFI---DGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---- 213 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---- 213 (251)
.+..+...|..++..|+|++|+.+|++|+ +..|. +. .+++++|.+|..+|+|++|+..+++|+.+.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 36788999999999999999999999999 44443 32 68999999999999999999999999998653
Q ss_pred --ChHHHHHHHHHHHhCCCHHHH-HHHHHHHHhhhhh
Q 025537 214 --WPTALYLQAACLFSLGMENDA-RETLKDGTNLEAK 247 (251)
Q Consensus 214 --~~~~~~~~g~~~~~~~~~~~A-~~~~~~al~l~P~ 247 (251)
...+|+++|.+|..+|++++| ..+|++|+.+...
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 8889999988654
No 142
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.27 E-value=4e-11 Score=98.88 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=94.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh------CCCCh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWP 215 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 215 (251)
+..+...|..++..|+|++|+.+|+++++.+|. + ..++.++|.++...|++++|+..+++++.+ .|..+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 567788999999999999999999999999987 6 478899999999999999999999999988 55668
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999998864
No 143
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.27 E-value=3e-11 Score=103.59 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhh------CC
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVV------SP 212 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p 212 (251)
+..+..+...|..++..|+|++|+.+|+++++.+|. +. .+|+++|.+|..+|++++|+..+++++.+ .|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 345778889999999999999999999999999987 65 58999999999999999999999999998 67
Q ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 213 DWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 213 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
....+++.+|.+|..+|++++|+..|++++++.+.
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999554
No 144
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.26 E-value=1.6e-11 Score=102.28 Aligned_cols=105 Identities=10% Similarity=-0.068 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC----
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 214 (251)
..+..+.+.|..+...|+|++|+.+|++|+++.+. ..+.++.++|.+|.. |++++|+..|++|+.+.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 34778899999999999999999999999988432 125789999999999 99999999999999998754
Q ss_pred --hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 215 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 215 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..+++++|.+|..+|+|++|+.+|++++++.|++.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 68899999999999999999999999999988753
No 145
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.26 E-value=3.9e-11 Score=102.13 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=93.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh------CCCCh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWP 215 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 215 (251)
+..+...|..++..|+|++|+.+|+++++..|. + ..+|..+|.+++..|++++|+..+++++.+ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 556788999999999999999999999999987 6 468999999999999999999999999988 45668
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 216 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999998875
No 146
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.25 E-value=1.1e-10 Score=94.91 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhHHHh----hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCC
Q 025537 143 MQETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~ 214 (251)
+..+..+...|..+.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+..+++|++.+ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 4456788999999999 999999999999999986 78999999999999 999999999999999984 8
Q ss_pred hHHHHHHHHHHHh----CCCHHHHHHHHHHHHhhhh
Q 025537 215 PTALYLQAACLFS----LGMENDARETLKDGTNLEA 246 (251)
Q Consensus 215 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~P 246 (251)
+.+++.+|.+|.. .+++++|+.+|++++++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999999999999 9999999999999998864
No 147
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.25 E-value=1.8e-11 Score=110.48 Aligned_cols=108 Identities=8% Similarity=0.014 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHhHHHhhc--CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhCCCChHH
Q 025537 141 SQMQETLNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTA 217 (251)
Q Consensus 141 ~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~ 217 (251)
.+++....|..+|-.+.+.+ +|++|+.+++++++.+|. |..+|++|+.+...+| .++++++++.++|+.+|.+..+
T Consensus 102 ~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~sa 180 (567)
T 1dce_A 102 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS 180 (567)
T ss_dssp HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHH
T ss_pred hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccH
Confidence 36677889999999999999 779999999999999999 9999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHhC--------------CCHHHHHHHHHHHHhhhhhcc
Q 025537 218 LYLQAACLFSL--------------GMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 218 ~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~P~~~ 249 (251)
|+++|.++..+ +.+++|++++.+|++++|+++
T Consensus 181 W~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 181 WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 99999999886 668999999999999999875
No 148
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.25 E-value=2.6e-11 Score=100.07 Aligned_cols=104 Identities=9% Similarity=-0.027 Sum_probs=88.7
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-C----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-------CCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-S----PTVYARRCLSYLMNDMPQEALGDAMQAQVV-------SPD 213 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------~p~ 213 (251)
+..+...|..+...++|++|+.+|.+++++.+.. + ..+++++|.+|..+|+|++|+..+++|++. .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 4456678999999999999999999999865431 1 347999999999999999999999999952 233
Q ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 214 WPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 214 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
...+++++|.+|..+|+|++|+..|++++++.++..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999988753
No 149
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=2e-11 Score=84.58 Aligned_cols=83 Identities=11% Similarity=0.090 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC--hHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYL 220 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~ 220 (251)
|..+..+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..+++++++.|.. ..+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 445678899999999999999999999999999998 99999999999999999999999999999997753 344344
Q ss_pred HHHHHH
Q 025537 221 QAACLF 226 (251)
Q Consensus 221 ~g~~~~ 226 (251)
+...+.
T Consensus 83 l~~~l~ 88 (100)
T 3ma5_A 83 LQDAKL 88 (100)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 150
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.25 E-value=3.3e-11 Score=102.92 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCC-----CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----hCCC
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-----MVSPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VSPD 213 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~ 213 (251)
..+..+...|..++..|+|++|+.+|.+|+++.+ ...+.+++++|.+|..+|++++|+..+++|+. .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4577889999999999999999999999998632 11356899999999999999999999999999 8888
Q ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 214 WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 214 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.+.+++.+|.++..+|++++|+..|++++++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999765
No 151
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.24 E-value=3.8e-11 Score=92.72 Aligned_cols=107 Identities=10% Similarity=-0.069 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc---CCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC--
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-- 213 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-- 213 (251)
.+..+..+...|..+...|+|++|+.+|.+++++ .++ ....+++++|.++..+|++++|+..+++++.+.+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3456778888999999999999999999999887 321 13567888999999999999999999998876432
Q ss_pred C----hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 214 W----PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 214 ~----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+ ..++..+|.++..+|++++|...|++++++..+.
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 2 3446888999999999999999999999887654
No 152
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.24 E-value=1.8e-11 Score=91.70 Aligned_cols=77 Identities=8% Similarity=0.001 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc-------CCCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-------GTMVSPTVY----ARRCLSYLMNDMPQEALGDAMQAQVVSP 212 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~~----~~~a~~~~~~~~~~~A~~~~~~al~~~p 212 (251)
..+..|.++|..+.+.|+|++|+.+|++||++ +|+ ++.+| +++|.++..+|++++|+.+|++|++++|
T Consensus 55 ~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 55 FDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 34669999999999999999999999999999 998 99999 9999999999999999999999999999
Q ss_pred CChHHHHHH
Q 025537 213 DWPTALYLQ 221 (251)
Q Consensus 213 ~~~~~~~~~ 221 (251)
++...+-.+
T Consensus 134 ~d~~~~~~~ 142 (159)
T 2hr2_A 134 ERKGETPGK 142 (159)
T ss_dssp HCCSCCTTH
T ss_pred CcHHHHHHH
Confidence 876544333
No 153
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.23 E-value=2.9e-11 Score=99.86 Aligned_cols=88 Identities=10% Similarity=-0.026 Sum_probs=76.7
Q ss_pred HHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHhCCCHHH
Q 025537 156 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACLFSLGMEND 233 (251)
Q Consensus 156 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~~~~~~ 233 (251)
+...+++++|+..|.++++.+|+ +..+++++|.++...|++++|+..+.++++.+|++ ..++.++|.++..+|+.++
T Consensus 195 l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 273 (287)
T 3qou_A 195 LLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDA 273 (287)
T ss_dssp HHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCH
T ss_pred HHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCc
Confidence 33334444455566667788998 99999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhh
Q 025537 234 ARETLKDGTNL 244 (251)
Q Consensus 234 A~~~~~~al~l 244 (251)
|...|++++..
T Consensus 274 a~~~~r~al~~ 284 (287)
T 3qou_A 274 LASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999853
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.23 E-value=4.4e-11 Score=102.21 Aligned_cols=105 Identities=13% Similarity=0.019 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh-
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP- 215 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~- 215 (251)
+..+..+...|..++..|++++|+.+|.+|+++.+.. .+.+++++|.+|..+|++++|+..+++|+.+.|...
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 3456666667777777777777777777766653220 234666677777777777777777777766644332
Q ss_pred -----HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 216 -----TALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 216 -----~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 46667777777777777777777777666554
No 155
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.23 E-value=4.3e-11 Score=83.06 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=69.2
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 175 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 175 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
++|+ ++.+++.+|.+++..|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3676 88999999999999999999999999999999999999999999999999999999999999999997
No 156
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.23 E-value=3.4e-11 Score=98.77 Aligned_cols=104 Identities=10% Similarity=-0.038 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+...|..++..|+|++|+.+|.+++++. |. ...++.++|.++..+|++++|+..+++++.+
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD-VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 5567889999999999999999999999999873 44 6788999999999999999999999999998
Q ss_pred ----CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 211 ----SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 211 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.|....+++.+|.+|..+|++++|+..|++++++.|+
T Consensus 187 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 187 LGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 7888899999999999999999999999999998776
No 157
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.22 E-value=5.1e-11 Score=87.88 Aligned_cols=105 Identities=10% Similarity=0.016 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC----
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 214 (251)
..+..+...|..++..|+|++|+.+|.+++++.+. ....++.++|.++..+|++++|+..+++++.+.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 34788899999999999999999999999987432 258899999999999999999999999999986653
Q ss_pred --hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999987653
No 158
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.22 E-value=5.9e-11 Score=85.20 Aligned_cols=67 Identities=16% Similarity=-0.053 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 182 TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 182 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..++.+|.+++..|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3578899999999999999999999999999999999999999999999999999999999999985
No 159
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.21 E-value=1.1e-11 Score=102.11 Aligned_cols=104 Identities=7% Similarity=-0.065 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCh-----H
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-----T 216 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~ 216 (251)
.+..+..+...|..+++.|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|+++ .
T Consensus 34 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 112 (281)
T 2c2l_A 34 NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112 (281)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHH
Confidence 4556888999999999999999999999999999998 999999999999999999999999999999998652 1
Q ss_pred H--------------------------HHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 217 A--------------------------LYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 217 ~--------------------------~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
. ...++. +..|++++|++.|+++++++|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 113 IPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccch
Confidence 1 112222 23689999999999999999964
No 160
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.21 E-value=9.8e-11 Score=84.83 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=68.8
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 175 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 175 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+|. ++..|+++|.+++..|+|++|+..|++++.++|+++.+|+.+|.++..+|++++|+.+|+++++++|++
T Consensus 4 ~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 4 MKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp --CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred Cccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 4555 899999999999999999999999999999999999999999999999999999999999999999975
No 161
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.19 E-value=1.2e-10 Score=97.82 Aligned_cols=108 Identities=8% Similarity=0.021 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHhHHHhhc--CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhCCCChHH
Q 025537 141 SQMQETLNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTA 217 (251)
Q Consensus 141 ~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~ 217 (251)
.+|+....+..++..+...+ .+++++.+++++++.+|. |..+|++|+.+...+|. ++++++++.++|+.+|.+..+
T Consensus 103 ~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SA 181 (331)
T 3dss_A 103 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS 181 (331)
T ss_dssp HCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHH
T ss_pred hCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHH
Confidence 35667888889999998888 499999999999999999 99999999999999999 699999999999999999999
Q ss_pred HHHHHHHHHhC--------------CCHHHHHHHHHHHHhhhhhcc
Q 025537 218 LYLQAACLFSL--------------GMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 218 ~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~P~~~ 249 (251)
|++++.++..+ +.++++++++.+++.++|+++
T Consensus 182 W~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 182 WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 99999999988 569999999999999999975
No 162
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.19 E-value=8.3e-11 Score=98.06 Aligned_cols=107 Identities=11% Similarity=-0.061 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHhHH----Hhh---cCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHhhCC
Q 025537 142 QMQETLNSKKHGDTA----FRA---KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQ--EALGDAMQAQVVSP 212 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~~p 212 (251)
+|+....+..++..+ ... +++++++.+++++++.+|. |..+|+.|+.+...+|.++ ++++.+.++++.+|
T Consensus 99 nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 455566777777777 555 7899999999999999999 9999999999999999998 99999999999999
Q ss_pred CChHHHHHHHHHHHhCCC------HHHHHHHHHHHHhhhhhcc
Q 025537 213 DWPTALYLQAACLFSLGM------ENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 213 ~~~~~~~~~g~~~~~~~~------~~~A~~~~~~al~l~P~~~ 249 (251)
.+..+|++++.++..++. +++++++++++|+++|++.
T Consensus 178 ~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 178 KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999998 9999999999999999875
No 163
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.19 E-value=6.7e-11 Score=81.11 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=63.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChH-HHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 184 YARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-ALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 184 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.+++|.+++..|++++|+..|+++++.+|+++. +|+.+|.+|..+|++++|+.+|+++++++|++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 357899999999999999999999999999999 999999999999999999999999999999864
No 164
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.18 E-value=3.8e-10 Score=91.68 Aligned_cols=97 Identities=10% Similarity=-0.020 Sum_probs=90.2
Q ss_pred HHHHHHHHHhHHHh----hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCChH
Q 025537 145 ETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPT 216 (251)
Q Consensus 145 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 216 (251)
.+..+...|..++. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+..+++|++.+ ++.
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~ 147 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGD 147 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHH
Confidence 57788999999999 999999999999999985 78999999999999 999999999999999986 789
Q ss_pred HHHHHHHHHHh----CCCHHHHHHHHHHHHhhhh
Q 025537 217 ALYLQAACLFS----LGMENDARETLKDGTNLEA 246 (251)
Q Consensus 217 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~P 246 (251)
+++.+|.+|.. .+++++|+.+|++++++++
T Consensus 148 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 148 GCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999999 9999999999999998754
No 165
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.17 E-value=3.5e-10 Score=79.68 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 223 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 223 (251)
.....+...|..++..|++++|+..|.++++.+|. +..++.++|.++..+|++++|+..+++++.++|+++.+++.+|.
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34667889999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 025537 224 CLFSLG 229 (251)
Q Consensus 224 ~~~~~~ 229 (251)
++...|
T Consensus 120 ~~~~~g 125 (125)
T 1na0_A 120 AKQKQG 125 (125)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 987654
No 166
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.17 E-value=7.8e-11 Score=96.61 Aligned_cols=105 Identities=11% Similarity=-0.078 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC--CC-ChHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--PD-WPTA 217 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~ 217 (251)
.+... ..+..|..+++.++|++|+.+|++++... |.....+++++|.++..+|++++|+..|++++.-. |. .+.+
T Consensus 132 ~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da 210 (282)
T 4f3v_A 132 GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAI 210 (282)
T ss_dssp TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHH
T ss_pred CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHH
Confidence 34556 78999999999999999999999888764 21014589999999999999999999999998654 66 6789
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 218 LYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 218 ~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
++++|.++..+|+.++|...|++++..+|+
T Consensus 211 ~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 211 AWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999997
No 167
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.17 E-value=2.7e-10 Score=79.57 Aligned_cols=83 Identities=10% Similarity=-0.036 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+..+..+...|..++..|+|++|+..|.++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.++..+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 34 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3445778899999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 025537 222 AACL 225 (251)
Q Consensus 222 g~~~ 225 (251)
+.+.
T Consensus 113 ~~~~ 116 (118)
T 1elw_A 113 QNME 116 (118)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8775
No 168
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.15 E-value=1.2e-10 Score=99.04 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=79.7
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC----
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 214 (251)
..+..+...|..++..|+|++|+.+|.+++++.|.. ...++.++|.+|..+|++++|+..+++++.+.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 345677788888888888888888888888765430 12377888888888888888888888888776665
Q ss_pred --hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 6777888888888888888888888888776653
No 169
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.15 E-value=2.7e-10 Score=96.22 Aligned_cols=111 Identities=7% Similarity=-0.056 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHHHhHHHhhc-CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHhhCCCC
Q 025537 138 MWTSQMQETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-D-MPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 138 ~~~~~~~~a~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~~~p~~ 214 (251)
....+|+....+..+|..+...| .+++++.+++++|..+|+ +..+|+.|+.++..+ + ++++++..+.++++.+|++
T Consensus 80 ~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN 158 (349)
T 3q7a_A 80 IVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC
T ss_pred HHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC
Confidence 33446777889999999999988 599999999999999999 999999999999998 8 8999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHH--------HHHHHHHHHHhhhhhcc
Q 025537 215 PTALYLQAACLFSLGMEN--------DARETLKDGTNLEAKKN 249 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~--------~A~~~~~~al~l~P~~~ 249 (251)
..+|+.++.++..+|.++ ++++.++++++++|+|.
T Consensus 159 y~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 159 YHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999998 99999999999999864
No 170
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.14 E-value=6.1e-10 Score=93.59 Aligned_cols=107 Identities=4% Similarity=-0.136 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhHHHhhcC----------HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHh
Q 025537 142 QMQETLNSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM--PQEALGDAMQAQV 209 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~ 209 (251)
+|+....+..++..+...+. +++++.+++.++..+|. +..+|+.|+.++..+++ +++++..|.++++
T Consensus 60 nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~ 138 (331)
T 3dss_A 60 NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLE 138 (331)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHH
Confidence 45556666777777766554 78999999999999999 99999999999999994 8999999999999
Q ss_pred hCCCChHHHHHHHHHHHhCCC-HHHHHHHHHHHHhhhhhcc
Q 025537 210 VSPDWPTALYLQAACLFSLGM-ENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 210 ~~p~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~P~~~ 249 (251)
++|.+..+|++++.++..+|. ++++++++.++++++|+|.
T Consensus 139 ~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 139 ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred hCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999 6999999999999999864
No 171
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.13 E-value=1.4e-10 Score=99.41 Aligned_cols=104 Identities=13% Similarity=0.029 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC---
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS------PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--- 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 214 (251)
..+..+...|..++..|+|++|+.+|.+++++.|. . ..++.++|.+|..+|++++|+..+++++.+.|..
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 34568888999999999999999999999988653 2 2388999999999999999999999999988755
Q ss_pred ---hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 ---PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++..+|++++|+.+|++++++.++.
T Consensus 300 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 336 (411)
T 4a1s_A 300 EVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL 336 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 7889999999999999999999999999987764
No 172
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.1e-09 Score=79.88 Aligned_cols=81 Identities=10% Similarity=0.003 Sum_probs=76.5
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
...+...|..++..|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..+++++.++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999998 9999999999999999999999999999999999999998888775
Q ss_pred Hh
Q 025537 226 FS 227 (251)
Q Consensus 226 ~~ 227 (251)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.12 E-value=4.4e-10 Score=88.49 Aligned_cols=96 Identities=16% Similarity=0.018 Sum_probs=76.2
Q ss_pred HHHHHHHHHhHHHhhc----CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCC--CC
Q 025537 145 ETLNSKKHGDTAFRAK----DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSP--DW 214 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p--~~ 214 (251)
.+..+...|..+.. + ++++|+.+|.++++.. ++.+++++|.+|.. .+++++|+..+++|++..| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 46677788888777 6 7888888888886543 67888888888877 7788888888888888877 45
Q ss_pred hHHHHHHHHHHHh----CCCHHHHHHHHHHHHhh
Q 025537 215 PTALYLQAACLFS----LGMENDARETLKDGTNL 244 (251)
Q Consensus 215 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l 244 (251)
+.+++.+|.+|.. .+++++|+.+|++++++
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 8888888888888 77888888888888877
No 174
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=5.4e-10 Score=76.46 Aligned_cols=71 Identities=18% Similarity=-0.020 Sum_probs=64.2
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 176 GTMVSPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 176 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+|+ ++.++..+|.+++..++ ..+|...+++|++++|+++.+++.+|..++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 566 89999999999976655 699999999999999999999999999999999999999999999999987
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.11 E-value=4.5e-10 Score=95.86 Aligned_cols=105 Identities=13% Similarity=-0.002 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC---
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM------VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD--- 213 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--- 213 (251)
+..+..+...|..++..|++++|+.+|.+|+++.+. ..+.+++++|.+|..+|+|++|+..+.+|+.+.+.
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 344556666666666666666666666666654321 02345566666666666666666666666665321
Q ss_pred ---ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 214 ---WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 214 ---~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
...+++++|.+|..+|++++|+.+|++++++...
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 2345666666666666666666666666665443
No 176
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.11 E-value=4.2e-10 Score=86.77 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=92.6
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHc------cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh---CC----
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFID------GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---SP---- 212 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p---- 212 (251)
+..+...|..++..|+|++|+.+|.++++ ..|. ...+++++|.++..+|++++|+..+.+++.+ .+
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 66788999999999999999999999999 7887 8999999999999999999999999999998 44
Q ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 213 DWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 213 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
....+++.+|.++..+|++++|+..|++++++.+.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 33677999999999999999999999999988664
No 177
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.10 E-value=9.4e-10 Score=92.93 Aligned_cols=96 Identities=10% Similarity=-0.052 Sum_probs=87.9
Q ss_pred HhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhC-C-
Q 025537 153 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACLFSL-G- 229 (251)
Q Consensus 153 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~-~- 229 (251)
.....+.+..++|+.+++++|.++|+ +.++|+.|+.++..+| .+++++..+.+++..+|++..+|+.++.++..+ +
T Consensus 61 r~~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQ 139 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCC
Confidence 33444556668899999999999999 9999999999999999 599999999999999999999999999999998 8
Q ss_pred CHHHHHHHHHHHHhhhhhcc
Q 025537 230 MENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 230 ~~~~A~~~~~~al~l~P~~~ 249 (251)
+++++++.+.++++++|+|.
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy 159 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNY 159 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCH
T ss_pred ChHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999863
No 178
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.10 E-value=1.4e-09 Score=77.79 Aligned_cols=84 Identities=13% Similarity=-0.020 Sum_probs=74.7
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
+..+...|..++..|+|++|+..|+++++.+|+ + +.+++++|.++..+|++++|+..+++++...|+++.+...+.
T Consensus 39 ~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 39 PNALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 367889999999999999999999999999998 7 889999999999999999999999999999999998877776
Q ss_pred HHHHhCCC
Q 025537 223 ACLFSLGM 230 (251)
Q Consensus 223 ~~~~~~~~ 230 (251)
.+....++
T Consensus 118 ~l~~l~~~ 125 (129)
T 2xev_A 118 RLQSIRLG 125 (129)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhh
Confidence 66555444
No 179
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.10 E-value=2.4e-10 Score=94.10 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=72.7
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-----
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 214 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 214 (251)
.+..+...|..++..|++++|+.+|+++++..+. ....++.++|.++..+|++++|+..+++++.+.|..
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 261 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 261 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhH
Confidence 3556677777777777777777777777766432 012367777777777777777777777777766554
Q ss_pred -hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 262 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 296 (338)
T 3ro2_A 262 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 6677777777777777777777777777776653
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.10 E-value=2.3e-10 Score=80.81 Aligned_cols=83 Identities=10% Similarity=-0.046 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC--hHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYL 220 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~ 220 (251)
+..+..+...|..++..|+|++|+..|.++++++|. +..+|+++|.+|..+|++++|+..+++++.++|.. ..+...
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKE 94 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHH
Confidence 344677889999999999999999999999999998 99999999999999999999999999999998853 444444
Q ss_pred HHHHHH
Q 025537 221 QAACLF 226 (251)
Q Consensus 221 ~g~~~~ 226 (251)
+...+.
T Consensus 95 l~~~l~ 100 (115)
T 2kat_A 95 LQVFLR 100 (115)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 181
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.08 E-value=6.3e-10 Score=98.54 Aligned_cols=104 Identities=8% Similarity=-0.058 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc-----CCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 142 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
..+.+....+.+..+..+|+|++|+..|.++++. .|+ ..+..++|+|.+|..+|+|++|+..+++++.+
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3445667778888888999999999999999965 222 04578999999999999999999999999985
Q ss_pred -CCCC---hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 211 -SPDW---PTALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 211 -~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
-|++ ...++++|.+|..+|+|++|+..|++|+++-
T Consensus 385 lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 385 YHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 4555 5678999999999999999999999999874
No 182
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.06 E-value=1.9e-09 Score=75.22 Aligned_cols=77 Identities=12% Similarity=-0.026 Sum_probs=69.6
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccC-------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 218 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 218 (251)
++..+..|..++..|+|..|+..|.+|++.. +. ...++.++|.+++++|+++.|+..+++|++++|+++.+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5567899999999999999999999999863 22 678999999999999999999999999999999999998
Q ss_pred HHHHH
Q 025537 219 YLQAA 223 (251)
Q Consensus 219 ~~~g~ 223 (251)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88873
No 183
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.05 E-value=2.3e-09 Score=84.33 Aligned_cols=103 Identities=11% Similarity=-0.080 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhHHHh----hcCHHHHHHHHHHHHccCCC-CCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCC
Q 025537 144 QETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~ 214 (251)
..+..+...|..++. .+++++|+.+|.++++..|. .++.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 346788899999988 89999999999999999862 148999999999999 88999999999999999 788
Q ss_pred hHHHHHHHHHHHhC-C-----CHHHHHHHHHHHHhhhhh
Q 025537 215 PTALYLQAACLFSL-G-----MENDARETLKDGTNLEAK 247 (251)
Q Consensus 215 ~~~~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~P~ 247 (251)
+.+++.+|.+|..- | ++++|+.+|+++++....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 99999999999864 3 899999999999987543
No 184
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.04 E-value=1.2e-09 Score=80.87 Aligned_cols=88 Identities=9% Similarity=0.013 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhC-C-CChHHHHHHHHHHHhCCCHHHHH
Q 025537 161 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND---MPQEALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDAR 235 (251)
Q Consensus 161 ~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~~A~ 235 (251)
....+...|.+.+..+|. +..+.++.|.++.+.+ ++++++..++..++.+ | ++.+++|++|.+++++|+|++|.
T Consensus 13 ~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 345566677777777775 8888888888888887 6678888888888888 6 56888888888888888888888
Q ss_pred HHHHHHHhhhhhcc
Q 025537 236 ETLKDGTNLEAKKN 249 (251)
Q Consensus 236 ~~~~~al~l~P~~~ 249 (251)
.+++++|+++|+|.
T Consensus 92 ~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 92 KYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHhcCCCCH
Confidence 88888888888763
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.02 E-value=1.7e-09 Score=94.32 Aligned_cols=101 Identities=10% Similarity=-0.086 Sum_probs=82.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHcc-----CCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----CCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SPD 213 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~ 213 (251)
+....+.+......|+|++|+..|.+++++ .|+ .-+..+.|+|.+|..+|+|++|+..+++++.+ -|+
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 334445555556678999999999999975 333 03567999999999999999999999999985 345
Q ss_pred C---hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhh
Q 025537 214 W---PTALYLQAACLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 214 ~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P 246 (251)
+ ...++++|.+|..+|+|++|+..|++|+++--
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 5 56799999999999999999999999998753
No 186
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.98 E-value=2.1e-09 Score=76.36 Aligned_cols=69 Identities=19% Similarity=0.073 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 180 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 180 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+..|+.+|.+++..|++++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 567899999999999999999999999999999999999999999999999999999999999999975
No 187
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.96 E-value=3.4e-09 Score=94.54 Aligned_cols=105 Identities=8% Similarity=-0.147 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhHHHh-------hcCHH-------HHHHHHHHHHc-cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 025537 142 QMQETLNSKKHGDTAFR-------AKDFS-------TAIDCYTQFID-GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQ 206 (251)
Q Consensus 142 ~~~~a~~~~~~g~~~~~-------~~~~~-------~A~~~~~~al~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 206 (251)
.|..+..+...|..+.+ .|+++ +|+..|++|++ ..|+ +..+|.+++..+...|++++|...|++
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~ 346 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 346 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 45567788888888875 68876 88899999987 7887 888888888888888999999999999
Q ss_pred HHhhCCCCh-HHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 207 AQVVSPDWP-TALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 207 al~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+++++|+++ .+|..+|.++...|++++|...|++|++..|.
T Consensus 347 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 347 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 999888875 58888888877777777777777777776654
No 188
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.95 E-value=3.9e-09 Score=92.07 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=84.7
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccC-----CC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----CCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-----TM--VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SPD 213 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~ 213 (251)
+.........+..+|+|++|+..|+++++.. |+ .....+.|+|.+|..+|+|++|+..+++++.+ -|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 4556666777888999999999999999762 22 03568999999999999999999999999975 355
Q ss_pred C---hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 214 W---PTALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 214 ~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
+ ...++++|.+|..+|++++|+..|++|+++-
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 5 5678999999999999999999999999874
No 189
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.95 E-value=1.1e-08 Score=86.62 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=84.7
Q ss_pred HHHHHHHHhHHHhhc---CHHHHHHHHHHHHccCCCCCHHHHHHHHH---------------------------------
Q 025537 146 TLNSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCL--------------------------------- 189 (251)
Q Consensus 146 a~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~a~--------------------------------- 189 (251)
|-.++.+|..++..+ ++.+|+.+|++|++++|+ ++.+|..++.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~-~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE-FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 556677787777654 468899999999999998 7776664333
Q ss_pred -----------HHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 190 -----------SYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 190 -----------~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 334479999999999999999975 6788999999999999999999999999999964
No 190
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.92 E-value=5.5e-09 Score=93.16 Aligned_cols=104 Identities=10% Similarity=-0.027 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP-TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
|.....+...|..+.+.|++++|...|+++++.+|. ++ .+|.+.+.++.++|++++|+..|++|++..|.....+...
T Consensus 318 p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~ 396 (530)
T 2ooe_A 318 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTA 396 (530)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHH
Confidence 344566777777777778888888888888887776 54 4777777666666666666666666666655555555544
Q ss_pred HHH-HHhCCCHHHHHHHHHHHHhhhhh
Q 025537 222 AAC-LFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 222 g~~-~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+.+ +...|++++|...|+++++.+|+
T Consensus 397 a~~~~~~~~~~~~A~~~~e~al~~~p~ 423 (530)
T 2ooe_A 397 ALMEYYCSKDKSVAFKIFELGLKKYGD 423 (530)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHCCC
Confidence 443 23456666666666666666654
No 191
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.92 E-value=2e-08 Score=73.63 Aligned_cols=90 Identities=9% Similarity=-0.076 Sum_probs=84.2
Q ss_pred HHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 152 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 152 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
.|..+...+.+++|+.+|++|.+.. ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 8888888899999999999999984 88999999999999 89999999999999987 689999999999999
Q ss_pred ----CCCHHHHHHHHHHHHhhhh
Q 025537 228 ----LGMENDARETLKDGTNLEA 246 (251)
Q Consensus 228 ----~~~~~~A~~~~~~al~l~P 246 (251)
.+++++|+.+|+++.+...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999999999998754
No 192
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.89 E-value=5.1e-09 Score=88.75 Aligned_cols=101 Identities=17% Similarity=0.092 Sum_probs=88.1
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccC--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC----
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---- 214 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 214 (251)
..+...|..++..|+|++|+.+|++++++. |. ...++.++|.++..+|++++|+..+.+++.+.|..
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 346789999999999999999999999864 22 45678889999999999999999999999998863
Q ss_pred -hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..+++.+|.++...|++++|...+++++++.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 5688999999999999999999999999987654
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.88 E-value=1.4e-08 Score=85.98 Aligned_cols=68 Identities=7% Similarity=-0.098 Sum_probs=35.5
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCC----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD 213 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 213 (251)
+..+...|..++..|++++|..+|.++++..+.. ...++.++|.++...|++++|+..+++++.+.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 3344455555555555555555555555544321 1234555555555555555555555555555433
No 194
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.83 E-value=6.6e-09 Score=85.17 Aligned_cols=97 Identities=9% Similarity=0.068 Sum_probs=84.6
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAAC 224 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~ 224 (251)
+.....+..+...|+|++|...|+.++...|. .. +++.+|.++++.++|++|+..+++++...+.. ..+++.+|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 34456688899999999999999999999987 66 99999999999999999999999887764222 4589999999
Q ss_pred HHhCCCHHHHHHHHHHHHhhh
Q 025537 225 LFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 225 ~~~~~~~~~A~~~~~~al~l~ 245 (251)
+..+|++++|+.+|++++...
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998544
No 195
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.77 E-value=8.9e-08 Score=84.44 Aligned_cols=96 Identities=11% Similarity=0.018 Sum_probs=84.1
Q ss_pred HHHHHHHHhHHHhhc---CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCChHHH
Q 025537 146 TLNSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTAL 218 (251)
Q Consensus 146 a~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~ 218 (251)
+..+...|..++..| ++++|+.+|+++++.. ++.+++++|.+|.. .+++++|+..|++|++.. ++.++
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~ 402 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKG---EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQ 402 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHH
Confidence 456778888887755 8899999999999874 78899999999998 899999999999998864 79999
Q ss_pred HHHHHHHHh----CCCHHHHHHHHHHHHhhhh
Q 025537 219 YLQAACLFS----LGMENDARETLKDGTNLEA 246 (251)
Q Consensus 219 ~~~g~~~~~----~~~~~~A~~~~~~al~l~P 246 (251)
+++|.+|.. .+++++|..+|+++++.+|
T Consensus 403 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 403 VQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999998 8999999999999999984
No 196
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.76 E-value=2e-08 Score=88.98 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+.+.|..|..+|+|++|+.+|.++++. .|+ -+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999965 233 4678999999999999999999999999885
Q ss_pred -CCCCh---HHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 211 -SPDWP---TALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 211 -~p~~~---~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
-|++| +..-.++.++..++.|++|...|.++.+-.
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56764 556788999999999999999999987643
No 197
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.74 E-value=3.2e-08 Score=67.53 Aligned_cols=71 Identities=7% Similarity=-0.110 Sum_probs=64.0
Q ss_pred HHHHHHHHHhHHHhhcC---HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChH
Q 025537 145 ETLNSKKHGDTAFRAKD---FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT 216 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 216 (251)
+++.+...|..++..++ .++|..++.+|++++|+ +..+++.+|..+++.|+|++|+..++++++.+|..+.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 46777888998876655 79999999999999999 9999999999999999999999999999999998543
No 198
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.74 E-value=6.6e-08 Score=78.87 Aligned_cols=88 Identities=13% Similarity=0.018 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHccCCCC-CHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHh-CCCHH
Q 025537 161 DFSTAIDCYTQFIDGGTMV-SPTVYARRCLSYLMN-----DMPQEALGDAMQAQVVSPDW-PTALYLQAACLFS-LGMEN 232 (251)
Q Consensus 161 ~~~~A~~~~~~al~~~p~~-~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~~~g~~~~~-~~~~~ 232 (251)
...+|...+++||++||+. +..+|..+|..|.+. |+.++|...|++|++++|+. ...++..|..+.. .|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 3578999999999999961 356999999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHHHhhhhhc
Q 025537 233 DARETLKDGTNLEAKK 248 (251)
Q Consensus 233 ~A~~~~~~al~l~P~~ 248 (251)
+|...+++++..+|+.
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999999984
No 199
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.73 E-value=7.4e-08 Score=66.97 Aligned_cols=70 Identities=11% Similarity=-0.128 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC-------CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 180 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVS-------PDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 180 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
++.-.+.+|..++..|+|..|+.-+++|++.. +..+..+..+|.+++.+|+++.|+..++++++++|++.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 45667899999999999999999999999963 35688999999999999999999999999999999863
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.67 E-value=1.1e-07 Score=83.27 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=68.5
Q ss_pred HHHHHHhHHHhhc---CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhc----CCHHHHHHHHHHHHhhCCCChHHHHH
Q 025537 148 NSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN----DMPQEALGDAMQAQVVSPDWPTALYL 220 (251)
Q Consensus 148 ~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~~~p~~~~~~~~ 220 (251)
.+...|..+...| ++++|+.+|.++++..|. .+..++++|.+|... +++++|+..|+++. |+++.++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~ 253 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVS 253 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHH
Confidence 5667777777777 777777777777777766 677777777777655 67777777777776 777777777
Q ss_pred HHHH-H--HhCCCHHHHHHHHHHHHhh
Q 025537 221 QAAC-L--FSLGMENDARETLKDGTNL 244 (251)
Q Consensus 221 ~g~~-~--~~~~~~~~A~~~~~~al~l 244 (251)
+|.+ + ...+++++|+.+|+++.+.
T Consensus 254 Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 254 LAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 7777 3 4677777777777777754
No 201
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.64 E-value=5e-07 Score=79.62 Aligned_cols=97 Identities=14% Similarity=0.006 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhHHHh----hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCCh
Q 025537 144 QETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWP 215 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~ 215 (251)
..+..+...|..++. .+++++|+.+|.++++.. ++.+++++|.+|.. .+++++|+..|++|+.. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 457788999999999 999999999999998864 78899999999998 88999999999999875 589
Q ss_pred HHHHHHHHHHHh----CCCHHHHHHHHHHHHhhh
Q 025537 216 TALYLQAACLFS----LGMENDARETLKDGTNLE 245 (251)
Q Consensus 216 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 245 (251)
.+++.+|.+|.. .+++++|+.+|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999998 899999999999998763
No 202
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.57 E-value=2.5e-07 Score=68.47 Aligned_cols=80 Identities=13% Similarity=-0.013 Sum_probs=70.1
Q ss_pred HHHHHHHHHhHHHhhc---CHHHHHHHHHHHHccC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHH
Q 025537 145 ETLNSKKHGDTAFRAK---DFSTAIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 220 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 220 (251)
+.+..++.|..+.+.+ ++++|+..++..++.+ |..+.++++++|.+|+++|+|.+|+.+++++++++|+|..+...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 3567778888898877 7789999999999998 73278999999999999999999999999999999999998876
Q ss_pred HHHH
Q 025537 221 QAAC 224 (251)
Q Consensus 221 ~g~~ 224 (251)
+-.+
T Consensus 111 k~~i 114 (152)
T 1pc2_A 111 ERLI 114 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.53 E-value=7.5e-07 Score=78.03 Aligned_cols=94 Identities=10% Similarity=-0.096 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhH-H--HhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHhhCCCCh
Q 025537 144 QETLNSKKHGDT-A--FRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----MPQEALGDAMQAQVVSPDWP 215 (251)
Q Consensus 144 ~~a~~~~~~g~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~ 215 (251)
..+..+...|.. + ...+++++|+.+|+++++.. ++.+++++|.+|. .| ++++|+..|++|. |.++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 445666677776 3 45777788888888777654 6777777777776 44 7777888887777 7777
Q ss_pred HHHHHHHHHHHh----CCCHHHHHHHHHHHHhh
Q 025537 216 TALYLQAACLFS----LGMENDARETLKDGTNL 244 (251)
Q Consensus 216 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l 244 (251)
.+++++|.+|.. ..++++|+.+|+++.+.
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 788888777766 33777777777777764
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.49 E-value=8.6e-07 Score=64.74 Aligned_cols=79 Identities=14% Similarity=-0.009 Sum_probs=70.8
Q ss_pred hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----CCCHHHH
Q 025537 159 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LGMENDA 234 (251)
Q Consensus 159 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~----~~~~~~A 234 (251)
.+++++|+.+|.++.+.... . +. +|.+|...+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-F--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-T--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-h--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 36889999999999998743 3 33 999999999999999999999997 699999999999999 8999999
Q ss_pred HHHHHHHHhh
Q 025537 235 RETLKDGTNL 244 (251)
Q Consensus 235 ~~~~~~al~l 244 (251)
+.+|+++.+.
T Consensus 81 ~~~~~~Aa~~ 90 (138)
T 1klx_A 81 AQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 205
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=6.9e-07 Score=76.82 Aligned_cols=100 Identities=9% Similarity=0.020 Sum_probs=74.3
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHccCCCCC----------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 025537 149 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----------------PTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 212 (251)
Q Consensus 149 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 212 (251)
..++|..+++.|+|++|++.|.++++..|... ..++.++|.+|..+|+|++|++.+.+++.+.+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45677778888899999999999888876411 13577888888899999999998888888766
Q ss_pred CChHH------HHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 213 DWPTA------LYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 213 ~~~~~------~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
...++ +..+|.++...|++++|+..+++++.+.++.
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 65433 3445666677777777887777777766653
No 206
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.41 E-value=1.4e-06 Score=62.16 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHH---HHHHHHHHHhhC-C-CChHHHHHHHHHHHhCCCHHHHH
Q 025537 161 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQE---ALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDAR 235 (251)
Q Consensus 161 ~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~~A~ 235 (251)
....+...|.+.+..++. +..+-|+.|.++.+..+... +|..++..++.+ | ..-+.+|.+|..++++|+|++|.
T Consensus 16 ~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 334555666666665654 77778888888887776555 777777777766 4 56677888888888888888888
Q ss_pred HHHHHHHhhhhhcc
Q 025537 236 ETLKDGTNLEAKKN 249 (251)
Q Consensus 236 ~~~~~al~l~P~~~ 249 (251)
.+++.+|+++|+|.
T Consensus 95 ~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 95 KYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 88888888888763
No 207
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.38 E-value=1.7e-06 Score=83.91 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=78.3
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC--------------
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP-------------- 212 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-------------- 212 (251)
..+...|..++..|+|++|+.+|++| ..|..++.++.++|++++|++.+.+|...++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef 1266 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEF 1266 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHH
Confidence 45668999999999999999999996 3688899999999999999999999855443
Q ss_pred -----------CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 213 -----------DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 213 -----------~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
.+++.+..++..|...|.|++|+..++++|.++|.+
T Consensus 1267 ~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1267 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH
Confidence 244556677888999999999999999999999764
No 208
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.38 E-value=3.3e-06 Score=81.97 Aligned_cols=89 Identities=17% Similarity=0.206 Sum_probs=72.8
Q ss_pred HhHHHhhcCHHHHHHHHHHHH--------------------ccC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 025537 153 GDTAFRAKDFSTAIDCYTQFI--------------------DGG--TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV 210 (251)
Q Consensus 153 g~~~~~~~~~~~A~~~~~~al--------------------~~~--p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 210 (251)
|..+...|.|++|+.+|+++- +.. .+ .+.+|+++|.++...|++++|+..|.+|
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 666666666666666665532 111 23 6789999999999999999999999886
Q ss_pred CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 211 SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 211 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
+++.+|++.|.++..+|+|++|+++|..|.+.+++
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999988754
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=3.7e-06 Score=72.20 Aligned_cols=103 Identities=7% Similarity=-0.016 Sum_probs=87.3
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh------CCCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDW 214 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~ 214 (251)
+......|..+...|++++|+.+|++++...+. ..+.++.++|.+|..+|+|.+|+..+.+++.. .|..
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~ 174 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSL 174 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhH
Confidence 345566788888899999999999999875321 14678999999999999999999999999876 3445
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
..++...|.+|..+|+|++|...|++++.+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 175 VDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 7899999999999999999999999999987753
No 210
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.34 E-value=4.6e-06 Score=69.16 Aligned_cols=103 Identities=12% Similarity=-0.025 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC---CCHHHHHHHHHH--HHhcC--CHHHHHHHHHHHHhhCCCChH
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLS--YLMND--MPQEALGDAMQAQVVSPDWPT 216 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~a~~--~~~~~--~~~~A~~~~~~al~~~p~~~~ 216 (251)
...+.....+..+.+.|+++.|...+.+..+.+|+ .+..+..+++.+ .+..| ++++|+..|+++....|++..
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 34555556666666666666666666666666651 012333334333 44444 666667667666666665222
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 217 ALYLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 217 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
....+. ++..+|++++|...++..+++.|+
T Consensus 214 ~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 214 QLGLLN-LHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp HHHHHH-HHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred HHHHHH-HHHHcCCHHHHHHHHHHHHHhccc
Confidence 222222 666777777777777766666665
No 211
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.23 E-value=9.6e-07 Score=76.59 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=62.4
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+..+...|..+.+.|+|++|++.|.+| . ++..|...+.++...|+|+.|.....+ |... ++-...+...|
T Consensus 148 a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~---ad~l~~lv~~Y 217 (449)
T 1b89_A 148 VSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVH---ADELEELINYY 217 (449)
T ss_dssp TTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTC---HHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhC---HhhHHHHHHHH
Confidence 455666666666666666666666666 2 556666666666666666666554443 3333 33344567889
Q ss_pred HhCCCHHHHHHHHHHHHhhhhhc
Q 025537 226 FSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
...|++++|+..+++++.+++.+
T Consensus 218 ek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 218 QDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHTTCHHHHHHHHHHHTTSTTCC
T ss_pred HHCCCHHHHHHHHHHHhCCcHHH
Confidence 99999999999999999998653
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.23 E-value=6.3e-06 Score=68.33 Aligned_cols=96 Identities=14% Similarity=0.016 Sum_probs=78.8
Q ss_pred HHHHHHhHHHhhc--CHHHHHHHHHHHHccCCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----------CCCC
Q 025537 148 NSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV----------SPDW 214 (251)
Q Consensus 148 ~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~ 214 (251)
.....|...+..| ++.+|+..|+++.+..|+ .....+.+ +++++|+|++|..+++.+++. +|++
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~ 254 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK 254 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 3333454466566 999999999999888774 12344555 899999999999999988877 5999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 215 PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+.++.++..+...+|+ +|...+.++.+++|++
T Consensus 255 ~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 255 PTFLANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 9999999999999998 8999999999999985
No 213
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.19 E-value=9e-06 Score=70.52 Aligned_cols=86 Identities=14% Similarity=0.041 Sum_probs=55.4
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 226 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 226 (251)
..+...|..++..|+|++|+.+|+++ ..|..+|.|+.++|+|++|++.+.+| ++++.|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 37778888888888888888888876 23777888888888888888888887 47788888888888
Q ss_pred hCCCHHHHHHHHHHHHhhhhh
Q 025537 227 SLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 227 ~~~~~~~A~~~~~~al~l~P~ 247 (251)
..|+|+.|..+... |.++|+
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad 208 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHAD 208 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHH
T ss_pred HcCcHHHHHHHHHH-HHhCHh
Confidence 88888888766654 445554
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.16 E-value=4.4e-06 Score=72.79 Aligned_cols=75 Identities=9% Similarity=0.035 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+.+.|.+|..+|+|++|+.+|.++++. .|+ -+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999965 333 5678999999999999999999999999885
Q ss_pred -CCCChHHH
Q 025537 211 -SPDWPTAL 218 (251)
Q Consensus 211 -~p~~~~~~ 218 (251)
-|++|..-
T Consensus 416 lG~~Hp~~~ 424 (433)
T 3qww_A 416 HGKDHPYIS 424 (433)
T ss_dssp TCTTCHHHH
T ss_pred cCCCChHHH
Confidence 57776543
No 215
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.12 E-value=2.1e-05 Score=58.63 Aligned_cols=92 Identities=15% Similarity=0.027 Sum_probs=71.6
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccC---CCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC---C---
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGG---TMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP---D--- 213 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~---p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~--- 213 (251)
.+++....++..|.|+-|+...+.++.+. |+. -..++..+|.+++..++|.+|...|++||.+.- .
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45567777888999999999998877653 220 124678889999999999999999999876421 1
Q ss_pred -------------------ChHHHHHHHHHHHhCCCHHHHHHHHH
Q 025537 214 -------------------WPTALYLQAACLFSLGMENDARETLK 239 (251)
Q Consensus 214 -------------------~~~~~~~~g~~~~~~~~~~~A~~~~~ 239 (251)
..+..|+.+.||..++++++|+..++
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 12688999999999999999998765
No 216
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.10 E-value=5.5e-06 Score=72.15 Aligned_cols=83 Identities=11% Similarity=-0.005 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh----
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---- 210 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 210 (251)
+..+..+.+.|..|..+|+|++|+.+|.++++. .|. -+..++|+|.+|..+|++++|+..+++|+++
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 455778899999999999999999999999965 233 4578999999999999999999999999885
Q ss_pred -CCCChHH---HHHHHHHHH
Q 025537 211 -SPDWPTA---LYLQAACLF 226 (251)
Q Consensus 211 -~p~~~~~---~~~~g~~~~ 226 (251)
-|++|.. +.+++.+..
T Consensus 405 lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 405 HGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp TCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHH
Confidence 6777544 344555544
No 217
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.06 E-value=3.5e-05 Score=62.87 Aligned_cols=105 Identities=9% Similarity=-0.049 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHhHHHh------hcCHHHHHH-----HHHHHHc-cCCCCCHHHHHHHHHHHHh---c--C------CHHH
Q 025537 143 MQETLNSKKHGDTAFR------AKDFSTAID-----CYTQFID-GGTMVSPTVYARRCLSYLM---N--D------MPQE 199 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~------~~~~~~A~~-----~~~~al~-~~p~~~~~~~~~~a~~~~~---~--~------~~~~ 199 (251)
+..|..++.+|..|.. ...|.+++. -+..++. .+|+ +..+++-.|.+... . | ....
T Consensus 103 ~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~ 181 (301)
T 3u64_A 103 YSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHA 181 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHH
Confidence 3455566655555432 134444443 2345553 4555 77776666665543 2 2 3578
Q ss_pred HHHHHHHHHhhCCC--ChHHHHHHHHHHHhC-----CCHHHHHHHHHHHHhhhhhc
Q 025537 200 ALGDAMQAQVVSPD--WPTALYLQAACLFSL-----GMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 200 A~~~~~~al~~~p~--~~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~l~P~~ 248 (251)
|...+++|++++|+ +..+|..+|..|... |+.+.|.++|++||+++|+.
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999 566999999999996 99999999999999999975
No 218
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.99 E-value=1.7e-05 Score=67.04 Aligned_cols=75 Identities=17% Similarity=0.062 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 219 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 219 (251)
+..+..+...|..++..|++++|+..+++|++++| +..+|..+|.++...|++++|++.|++|+.++|..+..++
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 34466777788888889999999999999999996 5778889999999999999999999999999998765433
No 219
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.89 E-value=8.3e-05 Score=52.99 Aligned_cols=79 Identities=10% Similarity=-0.064 Sum_probs=65.1
Q ss_pred HHHHHHHHhHHHhhcCHHH---HHHHHHHHHccC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFST---AIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 221 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 221 (251)
.+.-++.|-.+.+.++... +|.+++..++.+ |...-.+++.+|..++++|+|.+|+.+++..|+++|+|..+.-.+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4555667777777666655 999999999887 532678899999999999999999999999999999999887666
Q ss_pred HHH
Q 025537 222 AAC 224 (251)
Q Consensus 222 g~~ 224 (251)
..+
T Consensus 115 ~~i 117 (126)
T 1nzn_A 115 RLI 117 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.75 E-value=0.00015 Score=51.87 Aligned_cols=78 Identities=5% Similarity=-0.165 Sum_probs=46.3
Q ss_pred HHHHHHHHhHHHhhcC---HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKD---FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
++.-++-+-.+.+.++ ..++|..++..++.+|...-+.++.+|..++++|+|.+|..+++.++++.|+|..+.-...
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 4445555555544433 3456666666666665324566666666666666666666666666666666666654444
Q ss_pred H
Q 025537 223 A 223 (251)
Q Consensus 223 ~ 223 (251)
.
T Consensus 120 ~ 120 (134)
T 3o48_A 120 M 120 (134)
T ss_dssp H
T ss_pred H
Confidence 3
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.68 E-value=0.00028 Score=51.09 Aligned_cols=78 Identities=5% Similarity=-0.148 Sum_probs=51.8
Q ss_pred HHHHHHHHhHHHhhcCH---HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDF---STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 222 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~---~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 222 (251)
.+.-++-+-.+.+..+- .++|.+++..++.+|...-+.++.+|..++++|+|.+|..+++..|++.|+|..+.-...
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 45556666666554443 457777777777666435566777777777777777777777777777777766655444
Q ss_pred H
Q 025537 223 A 223 (251)
Q Consensus 223 ~ 223 (251)
.
T Consensus 119 ~ 119 (144)
T 1y8m_A 119 M 119 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 222
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.61 E-value=0.001 Score=48.24 Aligned_cols=71 Identities=8% Similarity=-0.013 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHhcCCH---HHHHHHHHHHHhhCC-CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 179 VSPTVYARRCLSYLMNDMP---QEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 179 ~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
.+...-|+.|-++.+..+. .++|..++..++-.| ..-+.+|.+|..++++|+|++|..+.+.+|+++|+|.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 3788889999999887754 679999999999998 5689999999999999999999999999999999874
No 223
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=97.59 E-value=1.6e-05 Score=66.05 Aligned_cols=72 Identities=31% Similarity=0.549 Sum_probs=54.9
Q ss_pred CEEEeecCCC-CCchh------------hhHHHHcCCccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHH
Q 025537 1 MLLDLLSGKH-IPPSH------------ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 67 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~------------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~ 67 (251)
+|+||+||+. .+... +...........+++..+...+.......+..+..+|++.+|..||++.+|+
T Consensus 224 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 303 (326)
T 3uim_A 224 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303 (326)
T ss_dssp HHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred HHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHH
Confidence 3578899998 65221 1122223345677788887777888888899999999999999999999999
Q ss_pred HHHHh
Q 025537 68 ISLMS 72 (251)
Q Consensus 68 ~~L~~ 72 (251)
+.|++
T Consensus 304 ~~L~~ 308 (326)
T 3uim_A 304 RMLEG 308 (326)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 99975
No 224
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=97.57 E-value=3.2e-05 Score=64.15 Aligned_cols=76 Identities=17% Similarity=0.289 Sum_probs=56.6
Q ss_pred CEEEeecCCC-CCchh----------hhHHHHcCCccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 1 MLLDLLSGKH-IPPSH----------ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~----------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+|+||+||+. ..... .......+.+..++++.+......+....+..+..+|++.+|..||++.++++.
T Consensus 230 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 230 VLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp HHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 3678899987 43211 122233445667888887766677777888899999999999999999999999
Q ss_pred HHhhhhh
Q 025537 70 LMSLQKE 76 (251)
Q Consensus 70 L~~~~~~ 76 (251)
|+.+.+.
T Consensus 310 L~~~l~~ 316 (321)
T 2qkw_B 310 LEYALRL 316 (321)
T ss_dssp HHHHHHS
T ss_pred HHHHhhc
Confidence 9876543
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.54 E-value=0.00087 Score=47.92 Aligned_cols=72 Identities=8% Similarity=-0.016 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHhcCCH---HHHHHHHHHHHhhCC-CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 178 MVSPTVYARRCLSYLMNDMP---QEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 178 ~~~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~~~p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
..++..-|+.|-++.+..+. .++|..++..++.+| ..-+.+|.+|..++++|+|++|..+.+.+|+++|+|.
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 34788888888888887654 679999999999998 4589999999999999999999999999999999975
No 226
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=97.49 E-value=1.9e-05 Score=65.51 Aligned_cols=37 Identities=14% Similarity=0.261 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+....+.++..+|++.+|..||||.+|++.|+.+.+.
T Consensus 262 ~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 262 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 4556678899999999999999999999999988654
No 227
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.42 E-value=0.0057 Score=52.29 Aligned_cols=101 Identities=9% Similarity=0.006 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-----C--C--------------HHHHHHHHHHHHhcCCHHHHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----V--S--------------PTVYARRCLSYLMNDMPQEAL 201 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~--~--------------~~~~~~~a~~~~~~~~~~~A~ 201 (251)
....+.+...|......|+.+.|+..+.+|+.+-.. . . ..+...++.++...|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 334455666777777789999999999999977311 0 0 123455678888999999999
Q ss_pred HHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 202 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 202 ~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
..+..++..+|-+-.+|..+-.+++..|+..+|+..|+++-+
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998754
No 228
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.41 E-value=0.00073 Score=62.06 Aligned_cols=82 Identities=7% Similarity=-0.050 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHH-HHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 025537 163 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL-GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 241 (251)
Q Consensus 163 ~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 241 (251)
+.....|++||...|. ++.+|+..+......|+.++|+ ..+++|+...|.+...|+..+......|+++.|...|+++
T Consensus 326 ~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~ 404 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSC 404 (679)
T ss_dssp HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4466889999999998 9999999999999999999997 9999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 025537 242 TNLE 245 (251)
Q Consensus 242 l~l~ 245 (251)
++.-
T Consensus 405 l~~l 408 (679)
T 4e6h_A 405 IDRI 408 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 229
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.40 E-value=0.0013 Score=60.53 Aligned_cols=99 Identities=8% Similarity=-0.022 Sum_probs=83.0
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYLQAACLF 226 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 226 (251)
.+...++...+.|+.+.|...|.+|++..|.....+|...|....+.+. ++.|...|+.+++..|+.+..|...+....
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 4555566667788999999999999988332256778777777777654 899999999999999999999988888888
Q ss_pred hCCCHHHHHHHHHHHHhhhh
Q 025537 227 SLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 227 ~~~~~~~A~~~~~~al~l~P 246 (251)
..|+.+.|...|++|+...|
T Consensus 516 ~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSS
T ss_pred hCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999887
No 230
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=97.35 E-value=2.7e-05 Score=64.70 Aligned_cols=68 Identities=19% Similarity=0.347 Sum_probs=43.6
Q ss_pred CEEEeecCCC-CCchh----hhHHHHcCCcccccccccc---CCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHh
Q 025537 1 MLLDLLSGKH-IPPSH----ALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 72 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~----~~~~~~~~~~~~~~d~~l~---~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~ 72 (251)
||.||+||+. ..... +...+..+ ..+|.+. ...+ ..+.++..+|++.+|..||+|.+|+..|+.
T Consensus 226 vl~Elltg~~Pf~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 226 VLYELMTGELPYSHINNRDQIIFMVGRG----YASPDLSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp HHHHHHHSSCTTTTCCCHHHHHHHHHTT----CCCCCSTTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHhcC----CCCCCcccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 4678999998 54211 22333333 1223221 1222 235567789999999999999999999988
Q ss_pred hhhh
Q 025537 73 LQKE 76 (251)
Q Consensus 73 ~~~~ 76 (251)
++..
T Consensus 298 l~~~ 301 (307)
T 3omv_A 298 LQHS 301 (307)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 7654
No 231
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.24 E-value=0.0017 Score=48.34 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC---CCC---------------------CHHHHHHHHHHHHhcCCHH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG---TMV---------------------SPTVYARRCLSYLMNDMPQ 198 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---p~~---------------------~~~~~~~~a~~~~~~~~~~ 198 (251)
...++.+...|+.+|.+++|..|...|.+||... +.. ..++.+..+.||++++++.
T Consensus 60 ~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 60 PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHH
Confidence 3567889999999999999999999999997441 110 1268899999999999999
Q ss_pred HHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 199 EALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 199 ~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
+|+...+. |-..-..++.-.-+|..|
T Consensus 140 ~Ai~~Le~-Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDG-IPSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHT-SCGGGCCHHHHHHHHHHC
T ss_pred HHHHHHhc-CCchhcCHHHHHHHHHHh
Confidence 99998665 222334667666666654
No 232
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=97.14 E-value=0.00025 Score=59.47 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=28.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|+.||+|.+|++.|+.+.+.
T Consensus 289 ~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 289 VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 56677899999999999999999999988655
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.002 Score=59.59 Aligned_cols=59 Identities=15% Similarity=0.019 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 025537 183 VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 241 (251)
Q Consensus 183 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 241 (251)
++.--+..++..|+|+-|+..+++|+...|.....|+.++.+|..+|+|+.|+-.+.-|
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 34444666777899999999999999999999999999999999999999999877655
No 234
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=96.91 E-value=0.00047 Score=56.51 Aligned_cols=73 Identities=18% Similarity=0.355 Sum_probs=49.5
Q ss_pred CEEEeecCCC-CCchh-------hhHHHHcC--CccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHH
Q 025537 1 MLLDLLSGKH-IPPSH-------ALDLIRSK--NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 70 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~-------~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L 70 (251)
+|+||+||+. .+... ....+... .+.+.+++.+.. ........+..+...|++.+|..||++.++++.|
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L 301 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 3568889988 54221 11222221 244556666543 3455566778899999999999999999999999
Q ss_pred Hhhh
Q 025537 71 MSLQ 74 (251)
Q Consensus 71 ~~~~ 74 (251)
+.+.
T Consensus 302 ~~l~ 305 (307)
T 2nru_A 302 QEMT 305 (307)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8764
No 235
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=96.85 E-value=0.00054 Score=56.59 Aligned_cols=67 Identities=24% Similarity=0.330 Sum_probs=42.8
Q ss_pred CEEEeec-CCC-CCch---hhhHHHHcCCccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 1 MLLDLLS-GKH-IPPS---HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 1 vlLEl~t-gr~-~~~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
||.||+| |+. .... .+...+..|... ......+. .+.++..+|++.+|+.||+|.+|+..|+.+.+
T Consensus 219 vl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~-----~~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 219 VLWEIFTYGKQPWYQLSNNEVIECITQGRVL-----QRPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC-----CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC-----CCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 3678888 777 4321 133344444221 11112232 35567789999999999999999999988765
Q ss_pred h
Q 025537 76 E 76 (251)
Q Consensus 76 ~ 76 (251)
.
T Consensus 290 ~ 290 (299)
T 4asz_A 290 A 290 (299)
T ss_dssp H
T ss_pred c
Confidence 4
No 236
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.83 E-value=0.0091 Score=43.66 Aligned_cols=84 Identities=15% Similarity=0.075 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHccCCCC-------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHH
Q 025537 163 STAIDCYTQFIDGGTMV-------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDAR 235 (251)
Q Consensus 163 ~~A~~~~~~al~~~p~~-------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~ 235 (251)
++-++.|++|+..-|-. ...+|.+.| .+..+++.++|...|+.|+.+...+++.|...|..-...|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-ELKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-HHHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 77889999999876631 123444444 3456789999999999999998889999999999999999999999
Q ss_pred HHHHHHHhhhhh
Q 025537 236 ETLKDGTNLEAK 247 (251)
Q Consensus 236 ~~~~~al~l~P~ 247 (251)
+.+.+|+.+.|.
T Consensus 115 kILg~AiG~~~k 126 (161)
T 4h7y_A 115 QLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHTTCB
T ss_pred HHHHHHhccCCC
Confidence 999999999985
No 237
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.79 E-value=0.025 Score=42.29 Aligned_cols=95 Identities=9% Similarity=-0.039 Sum_probs=74.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH--hh-------------
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQ--VV------------- 210 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al--~~------------- 210 (251)
.+.-.-.+..++-.|+|..|+-.+.+ ++ ..+..+..+.||.++++|+.|+...++.+ +.
T Consensus 33 ~eY~lL~~I~LyyngEY~R~Lf~L~~---lN---T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~f 106 (242)
T 3kae_A 33 PEYRMLMSIVLYLNGEYTRALFHLHK---LN---TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEM 106 (242)
T ss_dssp -CTHHHHHHHHHHTTCHHHHHHHHHT---CC---BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTT
T ss_pred hHHHhhhhhhhhhcchHhHHHHHHHh---cc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccccee
Confidence 34455678888999999998877654 33 56677778999999999999999999998 22
Q ss_pred --CCCChHHH-HHHHHHHHhCCCHHHHHHHHHHHHhhhh
Q 025537 211 --SPDWPTAL-YLQAACLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 211 --~p~~~~~~-~~~g~~~~~~~~~~~A~~~~~~al~l~P 246 (251)
+|.+-+.+ ..+|..+.+.|+.+||+.+|.......|
T Consensus 107 fvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 107 FVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred eeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 34444444 4569999999999999999998877665
No 238
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=96.70 E-value=7.6e-05 Score=62.01 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=26.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
.+.++..+|++.+|..||+|.+|++.|+..
T Consensus 275 ~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 275 WVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 356778899999999999999999999754
No 239
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.70 E-value=0.036 Score=48.98 Aligned_cols=95 Identities=13% Similarity=0.027 Sum_probs=78.8
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--CCCChHHHHHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--SPDWPTALYLQAACL 225 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~g~~~ 225 (251)
.+...-..+.+.|++++|...|.+..+..-..+...|+.+-.+|.+.|++++|...+.+-.+. .| +...|..+-.+|
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~ 185 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHH
Confidence 344556678889999999999999776532226888999999999999999999999987764 45 566788899999
Q ss_pred HhCCCHHHHHHHHHHHHh
Q 025537 226 FSLGMENDARETLKDGTN 243 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~ 243 (251)
...|++++|...|++.-+
T Consensus 186 ~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHH
Confidence 999999999999988644
No 240
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0053 Score=56.77 Aligned_cols=61 Identities=8% Similarity=-0.063 Sum_probs=56.3
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA 207 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 207 (251)
+.-+..++..+..+|+|+-|+.+-.+|+...|. ....|+.++.||..+|+|+.|+-.++.+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs-eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALD-SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCch-hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 456778899999999999999999999999998 9999999999999999999999877765
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.60 E-value=0.027 Score=45.23 Aligned_cols=93 Identities=10% Similarity=0.046 Sum_probs=75.8
Q ss_pred hHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHH---------------
Q 025537 154 DTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL--------------- 218 (251)
Q Consensus 154 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~--------------- 218 (251)
..+++.|+.++|+......|+.+|. ++.....+-..+.-.|+|++|...++.+.+++|+....-
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~-da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~ 83 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKD 83 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999998 999999999999999999999999999999999875442
Q ss_pred --------------------HHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 219 --------------------YLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 219 --------------------~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
...+......|+.++|...-.++++.-|.
T Consensus 84 vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 84 FAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp HTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcc
Confidence 11233344567788888887778777664
No 242
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=96.46 E-value=0.001 Score=54.22 Aligned_cols=37 Identities=14% Similarity=0.261 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.....+..+..+|++.+|..||++.++++.|..+...
T Consensus 262 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 262 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred hhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 4455678889999999999999999999999887544
No 243
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=96.45 E-value=0.0013 Score=55.50 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=26.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+.++..+|++.+|..||++.++++.|..+.+
T Consensus 317 ~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 317 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 4566679999999999999999999987644
No 244
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.24 E-value=0.029 Score=49.51 Aligned_cols=79 Identities=14% Similarity=-0.025 Sum_probs=72.5
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 227 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 227 (251)
.+...|+.......+..|..+|.+|+.+.|+ +...|+.+|.+....|+.-+|+-+|-+++....-++.+.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~-~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC-CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 5668899998889999999999999999998 999999999999999999999999999999888899999888887754
No 245
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=96.24 E-value=0.0017 Score=53.79 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 41 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 41 ~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
....+..+..+|++.+|..||++.+|++.|+.+.+.
T Consensus 284 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 284 GMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 344577788899999999999999999999988754
No 246
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.11 E-value=0.071 Score=46.94 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=74.2
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
..+..-+....+.++.+.|...|.+| .. |......|...|...+..+ +++.|...|+.+++..|+.+..+...+...
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e 364 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GN-EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFL 364 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TT-SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hC-CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 34455555666778899999999999 43 4336778877777777666 699999999999999999998888888878
Q ss_pred HhCCCHHHHHHHHHHH
Q 025537 226 FSLGMENDARETLKDG 241 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~a 241 (251)
...|+.+.|...|+++
T Consensus 365 ~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 365 LRIGDEENARALFKRL 380 (493)
T ss_dssp HHHTCHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHH
Confidence 8889999998888876
No 247
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=95.90 E-value=0.0006 Score=56.66 Aligned_cols=33 Identities=18% Similarity=0.528 Sum_probs=28.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+..+|++.+|..||++.+++..|..+...
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 466778899999999999999999999887554
No 248
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.79 E-value=0.071 Score=45.53 Aligned_cols=93 Identities=9% Similarity=-0.117 Sum_probs=73.3
Q ss_pred HHHhHHHhhcCHHHHHHHHHHHHccCC----C-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC---CCC----hHHH
Q 025537 151 KHGDTAFRAKDFSTAIDCYTQFIDGGT----M-VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS---PDW----PTAL 218 (251)
Q Consensus 151 ~~g~~~~~~~~~~~A~~~~~~al~~~p----~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~----~~~~ 218 (251)
..|..++..|+|.+|+..+++.++... . ...+++..-...|..++++.++...+.+|.... +.+ ....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 789999999999999999998876421 1 124677888999999999999999999886643 122 3445
Q ss_pred HHHHHHHH-hCCCHHHHHHHHHHHHh
Q 025537 219 YLQAACLF-SLGMENDARETLKDGTN 243 (251)
Q Consensus 219 ~~~g~~~~-~~~~~~~A~~~~~~al~ 243 (251)
..-|..+. ..++|..|..+|-++++
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 55688888 89999999999999874
No 249
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.78 E-value=0.035 Score=44.63 Aligned_cols=61 Identities=21% Similarity=0.021 Sum_probs=57.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhcc
Q 025537 189 LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 249 (251)
Q Consensus 189 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 249 (251)
...++.|+.++|+..+...|+-+|.+++....+...+.-.|+++.|.+.++.+.+++|+..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 3466889999999999999999999999999999999999999999999999999999854
No 250
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.031 Score=48.32 Aligned_cols=96 Identities=9% Similarity=-0.031 Sum_probs=77.9
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCC--CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh---CCCC---hHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGT--MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---SPDW---PTALY 219 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p~~---~~~~~ 219 (251)
.+..+|..+++.|++++|+..|.++..... ..-..++.....+++..++|..+...+.+|-.+ .+++ .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 466899999999999999999999887643 224578888899999999999999999998654 2332 24456
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 220 LQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 220 ~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
..|.++...++|.+|...|-.++.
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHHHHHHHhc
Confidence 668888999999999999988764
No 251
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=95.75 E-value=0.0022 Score=54.00 Aligned_cols=74 Identities=16% Similarity=0.144 Sum_probs=46.6
Q ss_pred CEEEeecCCC-CCchh----hhHHH---HcCCccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHh
Q 025537 1 MLLDLLSGKH-IPPSH----ALDLI---RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 72 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~----~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~ 72 (251)
||+||+||+. ..... ..... ....+..++|+.+....-+.+ +..+...|++.+|.+||++.++.+.|..
T Consensus 250 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 250 CMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGE---IAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHH---HHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHH---HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 3678899988 54221 11111 112345667766642222233 4556668999999999999999999987
Q ss_pred hhhhc
Q 025537 73 LQKEA 77 (251)
Q Consensus 73 ~~~~~ 77 (251)
+....
T Consensus 327 ~~~~~ 331 (364)
T 3op5_A 327 GLKAI 331 (364)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 76543
No 252
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.71 E-value=0.083 Score=46.51 Aligned_cols=102 Identities=7% Similarity=-0.179 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHH---------------------------------
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCL--------------------------------- 189 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~--------------------------------- 189 (251)
+.....+..-+..+...|+.++|...|.+|+.. |. +..+|...+.
T Consensus 210 p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~-~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (493)
T 2uy1_A 210 YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SD-GMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDL 287 (493)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CC-SSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CC-cHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHH
Confidence 344667778888888889999999999999999 87 5444433222
Q ss_pred -------HHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCC-CHHHHHHHHHHHHhhhhh
Q 025537 190 -------SYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG-MENDARETLKDGTNLEAK 247 (251)
Q Consensus 190 -------~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~P~ 247 (251)
...+.+..+.|...|.+| ...+.....|...|..-+..+ +++.|...|+.+++..|+
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 122355677888888888 433334566666666666556 588899999999887665
No 253
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=95.66 E-value=0.0031 Score=52.17 Aligned_cols=38 Identities=13% Similarity=0.225 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+....+..+..+|++.+|..||++.++++.|+.+....
T Consensus 296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 296 ECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 34455778889999999999999999999999887654
No 254
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=95.60 E-value=0.0012 Score=54.62 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=28.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+..+|++.+|..||++.++++.|..+....
T Consensus 279 ~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 279 EVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 4566777999999999999999999998876543
No 255
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=95.59 E-value=0.0051 Score=51.02 Aligned_cols=37 Identities=14% Similarity=0.261 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+....+..+..+|++.+|..||++.+|++.|..+...
T Consensus 301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 301 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 4455677888999999999999999999999988654
No 256
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=95.56 E-value=0.0037 Score=50.69 Aligned_cols=31 Identities=26% Similarity=0.548 Sum_probs=26.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQ 74 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~ 74 (251)
.+..+...|++.+|.+||++.++++.|+.+.
T Consensus 257 ~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 257 RMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 3556777999999999999999999998764
No 257
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=95.54 E-value=0.0054 Score=50.38 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=28.1
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|.+||++.++++.|+.+...
T Consensus 269 ~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 355677799999999999999999999887654
No 258
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=95.44 E-value=0.0066 Score=49.79 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=28.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+..+|++.+|..||++.++++.|..+....
T Consensus 233 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 233 IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 556777999999999999999999999876553
No 259
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=95.35 E-value=0.0047 Score=49.25 Aligned_cols=30 Identities=23% Similarity=0.474 Sum_probs=26.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQ 74 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~ 74 (251)
+..+...|++.+|..||++.++++.|..+.
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 556667899999999999999999998764
No 260
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=95.21 E-value=0.0019 Score=53.00 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=28.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.++++.|+.+...
T Consensus 252 l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 252 FFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 55677899999999999999999999988655
No 261
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=95.08 E-value=0.0011 Score=56.33 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 4667788999999999999999999999876543
No 262
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=95.07 E-value=0.0069 Score=49.65 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=26.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|+..+|..||++.++++.|..+...
T Consensus 272 l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 272 ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 55677799999999999999999999877544
No 263
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.07 E-value=0.21 Score=44.05 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=70.0
Q ss_pred hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--CCCChHHHHHHHHHHHhCCCHHHHHH
Q 025537 159 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--SPDWPTALYLQAACLFSLGMENDARE 236 (251)
Q Consensus 159 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~g~~~~~~~~~~~A~~ 236 (251)
.+..++|...|.+..+..-..+...|+.+..+|.+.|++++|+..+++..+. .| +...|..+-.+|...|++++|..
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~ 161 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYE 161 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHH
Confidence 3457889999988766532236889999999999999999999999987764 45 57778888999999999999999
Q ss_pred HHHHHHhh
Q 025537 237 TLKDGTNL 244 (251)
Q Consensus 237 ~~~~al~l 244 (251)
.|++..+.
T Consensus 162 l~~~M~~~ 169 (501)
T 4g26_A 162 VDAHMVES 169 (501)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99987653
No 264
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=95.06 E-value=0.0067 Score=48.49 Aligned_cols=29 Identities=17% Similarity=0.510 Sum_probs=24.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
+..+..+|++.+|.+||++.++++.|..+
T Consensus 243 ~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 243 FAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 55677799999999999999999998753
No 265
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=94.96 E-value=0.0064 Score=49.75 Aligned_cols=33 Identities=15% Similarity=0.344 Sum_probs=28.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+..+|+..+|..||++.++++.|..+....
T Consensus 267 l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 267 LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 556677999999999999999999999886654
No 266
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=94.84 E-value=0.0051 Score=49.44 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=26.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+..+|++.+|..||++.++++.|..+.+..
T Consensus 244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 445667999999999999999999998876554
No 267
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=94.82 E-value=0.0065 Score=49.06 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=25.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
+..+...|++.+|..||++.++++.|+.+
T Consensus 259 l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 55677799999999999999999998753
No 268
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=94.79 E-value=0.017 Score=47.65 Aligned_cols=32 Identities=16% Similarity=0.363 Sum_probs=27.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+...
T Consensus 246 ~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 246 VYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 45577799999999999999999999887554
No 269
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=94.70 E-value=0.0098 Score=49.65 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=27.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+...|++.+|..||++.++++.|..+..
T Consensus 325 l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 325 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 5566779999999999999999999987754
No 270
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.57 E-value=0.16 Score=43.19 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=56.5
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 209 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 209 (251)
...+...+..+...|++.+|+..+.+++..+|- +-.+|..+-.+++..|+..+|+..|.++-+
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~-~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445667788889999999999999999999998 889999999999999999999999988643
No 271
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.46 E-value=1.1 Score=33.52 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=75.7
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHc----cCCCC------------CHH-HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFID----GGTMV------------SPT-VYARRCLSYLMNDMPQEALGDAMQAQ 208 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~------------~~~-~~~~~a~~~~~~~~~~~A~~~~~~al 208 (251)
+...+-+...+.+.++|.+|+...++.|+ .||+. +.+ ++..+|...-+.|+-++||.++....
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 44455667788899999999999999982 23332 334 45557999999999999999999887
Q ss_pred hhCCCChHH----------------------------------------------------------H--HHHHHHHHhC
Q 025537 209 VVSPDWPTA----------------------------------------------------------L--YLQAACLFSL 228 (251)
Q Consensus 209 ~~~p~~~~~----------------------------------------------------------~--~~~g~~~~~~ 228 (251)
..+|-++.. | -..+.-|+.+
T Consensus 142 ~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~aa~~yf~l 221 (242)
T 3kae_A 142 GKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISNAARRYFNL 221 (242)
T ss_dssp HHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHHHHHHHHHT
T ss_pred CCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHHHHHHHHhc
Confidence 765432211 1 2335568889
Q ss_pred CCHHHHHHHHHHHHhhhhh
Q 025537 229 GMENDARETLKDGTNLEAK 247 (251)
Q Consensus 229 ~~~~~A~~~~~~al~l~P~ 247 (251)
|-.++...+|...-+.||.
T Consensus 222 g~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 222 GMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred ccchhHHHHHHHHHhcCCC
Confidence 9999999999988888885
No 272
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=94.45 E-value=0.003 Score=52.47 Aligned_cols=32 Identities=19% Similarity=0.525 Sum_probs=27.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.++++.|..+...
T Consensus 248 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 248 VYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 55677799999999999999999999887644
No 273
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.37 E-value=0.18 Score=44.49 Aligned_cols=62 Identities=10% Similarity=-0.147 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 183 VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 183 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
.+..+|........+..|..+|.+|+.+.|++...|..+|.+....|+.-+|+-+|.+++-.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 44567777777788899999999999999999999999999999999999999999999864
No 274
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=94.22 E-value=0.013 Score=48.90 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=28.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+...|++.+|..||++.++++.|..+....
T Consensus 306 l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 306 LQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 555667999999999999999999998876553
No 275
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.46 Score=35.65 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=25.4
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHH
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFI 173 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al 173 (251)
....|+..|......|+++-|..+|.++=
T Consensus 33 ~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 33 DSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 35678999999999999999999999863
No 276
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=93.89 E-value=0.0042 Score=54.79 Aligned_cols=31 Identities=16% Similarity=0.336 Sum_probs=26.7
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQ 74 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~ 74 (251)
.+..+..+|++.+|..||++.++++.|+.+.
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 3556677999999999999999999998764
No 277
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=93.85 E-value=0.0054 Score=50.59 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=28.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+...|++.+|..||++.++++.|..+....
T Consensus 278 ~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 278 FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 456777999999999999999999998876543
No 278
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.57 E-value=0.8 Score=42.05 Aligned_cols=47 Identities=15% Similarity=0.005 Sum_probs=30.8
Q ss_pred HHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 025537 155 TAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA 207 (251)
Q Consensus 155 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 207 (251)
.+...|++++|.+.... + + +...|.++|..+++.++++.|+..|.++
T Consensus 661 ~~l~~~~~~~A~~~~~~---~--~-~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTD---E--S-AEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHTCHHHHHHHHTT---C--C-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHHh---h--C-cHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 34455666666555322 2 2 5677788888888888888887777775
No 279
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=93.44 E-value=0.014 Score=47.84 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=20.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..|||+.++++
T Consensus 259 ~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 259 VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 445667999999999999998864
No 280
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=93.43 E-value=0.0059 Score=51.64 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=27.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|..||++.++++.|+.+...
T Consensus 333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 355667799999999999999999999887543
No 281
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.25 E-value=0.28 Score=47.78 Aligned_cols=91 Identities=12% Similarity=0.019 Sum_probs=71.5
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHcc---CC-------------------CCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDG---GT-------------------MVSPTVYARRCLSYLMNDMPQEALGDAM 205 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p-------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 205 (251)
.-+-+|..++..|++++|..+|.+|-.. +. ...+..|......+-+.+.++.++...+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3478999999999999999999987421 10 0023466777788888999999999999
Q ss_pred HHHhhCCCCh-----HHHHHHHHHHHhCCCHHHHHHHH
Q 025537 206 QAQVVSPDWP-----TALYLQAACLFSLGMENDARETL 238 (251)
Q Consensus 206 ~al~~~p~~~-----~~~~~~g~~~~~~~~~~~A~~~~ 238 (251)
.||...+... ..|.++-..+..+|+|++|...+
T Consensus 924 lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred HHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 9999765432 26788889999999999998755
No 282
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=93.21 E-value=0.014 Score=47.81 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 281 l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 281 LRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHh
Confidence 556777999999999999999875
No 283
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=93.03 E-value=0.015 Score=51.16 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=28.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|.+||++.++++.|..+...
T Consensus 247 ~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 247 EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 356777899999999999999999999877543
No 284
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.96 E-value=1.8 Score=41.53 Aligned_cols=94 Identities=7% Similarity=-0.010 Sum_probs=75.5
Q ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHc-----cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh--hCCCChHHHH
Q 025537 147 LNSKKHGDTAFRAKDFSTAIDCYTQFID-----GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV--VSPDWPTALY 219 (251)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~ 219 (251)
..+...-+.+++.|+.++|...|....+ ..| +...|+.+-..|.+.|++++|++.|++-.+ +.| +.-.|.
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P--dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYn 204 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL--TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC--CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHH
Confidence 4566777889999999999999976432 355 688999999999999999999999998765 456 566677
Q ss_pred HHHHHHHhCCCH-HHHHHHHHHHHh
Q 025537 220 LQAACLFSLGME-NDARETLKDGTN 243 (251)
Q Consensus 220 ~~g~~~~~~~~~-~~A~~~~~~al~ 243 (251)
-+-.++.+.|+. ++|...|++..+
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 777788888885 778888877654
No 285
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=92.73 E-value=0.043 Score=45.85 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=25.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.++++.|......
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 44556699999999999999999988765443
No 286
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.64 E-value=1.7 Score=37.60 Aligned_cols=100 Identities=8% Similarity=-0.062 Sum_probs=76.3
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHc-c---CCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh---hCCCCh-
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFID-G---GTM-VSPTVYARRCLSYLMNDMPQEALGDAMQAQV---VSPDWP- 215 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~-~---~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~---~~p~~~- 215 (251)
.+......+..++..|+|.+|...+..... . ++. .-..++..-...|+..++|.+|...++++.. -.+..+
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 455667889999999999999999988642 1 211 1245677778889999999999999998732 233333
Q ss_pred ---HHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 216 ---TALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 216 ---~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
..+...|..+...++|.+|..+|..+++.
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 45667789999999999999999999864
No 287
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=92.62 E-value=0.01 Score=53.76 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=28.0
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|.+||++.++++.|..+...
T Consensus 567 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 567 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 355677899999999999999999999876544
No 288
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=92.62 E-value=0.012 Score=49.06 Aligned_cols=26 Identities=19% Similarity=0.440 Sum_probs=21.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+...|++.+|..||++.++++.
T Consensus 249 ~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 249 DLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 35567779999999999999999865
No 289
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=92.32 E-value=0.014 Score=49.81 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 297 ~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 297 LQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcccChhhCCCHHHHhhC
Confidence 5566779999999999999999765
No 290
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=92.29 E-value=0.099 Score=42.14 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 41 EGTELVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 41 ~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
....+.++..+|++.+|..||++.++++.|..+
T Consensus 268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 268 TLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 345577788899999999999999999999865
No 291
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=92.19 E-value=0.088 Score=42.44 Aligned_cols=33 Identities=15% Similarity=0.491 Sum_probs=28.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|..||++.++++.|..+...
T Consensus 260 ~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 260 EIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 356677799999999999999999999987654
No 292
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.01 E-value=0.89 Score=41.73 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=24.9
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQF 172 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~a 172 (251)
...+++.|..+.+.++++.|+.+|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 467889999999999999999999986
No 293
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.00 E-value=0.3 Score=43.08 Aligned_cols=75 Identities=7% Similarity=-0.118 Sum_probs=61.2
Q ss_pred ccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC-----CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhhhc
Q 025537 174 DGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP-----DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 248 (251)
Q Consensus 174 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 248 (251)
+.|+...+.+++-+-..|+..+.|+.|....+++.-... .....+|..|.++...++|.+|.+++..|++..|..
T Consensus 224 r~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 224 KHDNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred ccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 445543567788888999999999999999999853221 126778889999999999999999999999988864
No 294
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=91.99 E-value=0.85 Score=33.30 Aligned_cols=71 Identities=10% Similarity=-0.152 Sum_probs=58.9
Q ss_pred hhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCC
Q 025537 158 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGM 230 (251)
Q Consensus 158 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~ 230 (251)
..++.++|.+.|+.++++... .+.+|...|..-.++|+...|.....+|+.+.|.... .+..+..-.+.|.
T Consensus 72 ei~D~d~aR~vy~~a~~~hKk-FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~-~le~a~~nl~~~~ 142 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANCKK-FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE-MLEIALRNLNLQK 142 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHCTT-BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH-HHHHHHHHHHTTC
T ss_pred HhcCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH-HHHHHHHhhhcCC
Confidence 348999999999999998766 7999999999999999999999999999999997554 4455555555554
No 295
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=91.82 E-value=0.04 Score=44.41 Aligned_cols=24 Identities=25% Similarity=0.419 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+...|++.+|..||++.++++
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 456677999999999999999875
No 296
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=91.80 E-value=0.012 Score=53.61 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=26.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQ 74 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~ 74 (251)
+..+...|++.+|.+||++.++++.|..+.
T Consensus 601 l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 601 MYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 556677999999999999999999998764
No 297
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=91.58 E-value=0.069 Score=42.60 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 256 ~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 256 FTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHHHHhCCCcccCCCHHHHhhC
Confidence 5566779999999999999998753
No 298
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=91.38 E-value=0.12 Score=42.33 Aligned_cols=33 Identities=15% Similarity=0.499 Sum_probs=28.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+..+|++.+|..||++.++++.|..+...
T Consensus 291 ~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 291 EIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 356677899999999999999999999987653
No 299
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=91.29 E-value=0.044 Score=44.13 Aligned_cols=25 Identities=16% Similarity=0.456 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.+++..
T Consensus 255 ~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 4556779999999999999998753
No 300
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=91.08 E-value=0.041 Score=44.37 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+...|++.+|..||++.++++
T Consensus 259 l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhh
Confidence 566777999999999999999875
No 301
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=90.98 E-value=0.15 Score=41.99 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=29.1
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 3556778999999999999999999999876554
No 302
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=90.93 E-value=0.023 Score=46.42 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 269 l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 269 LQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHccCCcccCcCHHHHhcC
Confidence 4556679999999999999999864
No 303
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=90.68 E-value=0.13 Score=40.72 Aligned_cols=32 Identities=19% Similarity=0.439 Sum_probs=27.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|+.+...
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 55677799999999999999999999887543
No 304
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=90.57 E-value=0.077 Score=42.34 Aligned_cols=27 Identities=19% Similarity=0.367 Sum_probs=22.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLM 71 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~ 71 (251)
+..+..+|++.+|..||++.++++.+.
T Consensus 244 l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 244 LNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 556677999999999999999998753
No 305
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=90.36 E-value=0.085 Score=43.03 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=25.6
Q ss_pred HHHHHhcccCcCCCCCC-CHHHHHHHHHhhh
Q 025537 45 LVRLASRCLQSEARERP-NAKSLVISLMSLQ 74 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP-~m~~v~~~L~~~~ 74 (251)
+..+..+|++.+|..|| ++.++++.|....
T Consensus 265 l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 265 FDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred HHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 45567799999999999 9999999998654
No 306
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=90.26 E-value=0.033 Score=45.03 Aligned_cols=24 Identities=33% Similarity=0.639 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 264 ~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 264 FRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCcCHHHHhh
Confidence 556677999999999999999875
No 307
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=90.24 E-value=0.18 Score=39.92 Aligned_cols=31 Identities=16% Similarity=0.459 Sum_probs=27.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+...|++.+|..||++.++++.|..+..
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 5566779999999999999999999987754
No 308
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=90.18 E-value=0.19 Score=39.68 Aligned_cols=31 Identities=16% Similarity=0.459 Sum_probs=27.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+..+|++.+|..||++.++++.|..+..
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 234 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5567779999999999999999999987754
No 309
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=90.16 E-value=0.19 Score=41.20 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=30.7
Q ss_pred HHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 42 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 42 ~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
...+..+..+|++.+|..||++.++++.|..+....
T Consensus 285 ~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 285 VRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp HHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 345777888999999999999999999999876554
No 310
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.15 E-value=4 Score=30.50 Aligned_cols=81 Identities=11% Similarity=0.005 Sum_probs=57.4
Q ss_pred HHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------CCCChHHH---------
Q 025537 156 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--------SPDWPTAL--------- 218 (251)
Q Consensus 156 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~--------- 218 (251)
....|+++.|.+..... + +...|..+|...+..|+++-|...|.++=.+ --.+.+.+
T Consensus 15 AL~lg~l~~A~e~a~~l-----~-~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~ 88 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----N-DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQT 88 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----C-CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHh-----C-CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45679999999886654 3 7889999999999999999999988875221 11222222
Q ss_pred ----HHHHHHHHhCCCHHHHHHHHHHHH
Q 025537 219 ----YLQAACLFSLGMENDARETLKDGT 242 (251)
Q Consensus 219 ----~~~g~~~~~~~~~~~A~~~~~~al 242 (251)
.....+++.+|+++++++.|.+.-
T Consensus 89 ~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 89 REDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp TTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 222455677888888888776543
No 311
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=90.12 E-value=0.18 Score=42.38 Aligned_cols=31 Identities=29% Similarity=0.539 Sum_probs=27.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+..+|++.+|..||++.++++.|..+.+
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 5566779999999999999999999988764
No 312
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.02 E-value=1.6 Score=28.26 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
+.|..+..+|...=+.|+|++|+.+|.++|+.
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45777778888888999999999999888754
No 313
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=89.85 E-value=0.24 Score=39.74 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=28.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+..+|++.+|..||++.++++.|..+....
T Consensus 250 l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 250 FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 566778999999999999999999998875543
No 314
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=89.69 E-value=0.22 Score=40.10 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=26.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
.+..+..+|++.+|..||++.++++.|+.+
T Consensus 271 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 356677799999999999999999999875
No 315
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=89.68 E-value=0.2 Score=41.10 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=26.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|.+||++.++++.|+.+...
T Consensus 272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 356677799999999999999999999877544
No 316
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=89.66 E-value=0.18 Score=40.34 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=28.5
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 3556777999999999999999999998776553
No 317
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=89.59 E-value=0.25 Score=39.50 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=28.8
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|.+||++.++++.|..+....
T Consensus 249 ~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 249 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 3566777999999999999999999998876553
No 318
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=89.56 E-value=0.23 Score=39.56 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=27.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|+.+...
T Consensus 243 l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 243 VYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 55566799999999999999999999987543
No 319
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=89.35 E-value=0.052 Score=43.60 Aligned_cols=24 Identities=33% Similarity=0.704 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 243 ~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 243 FVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhhcChhhCcCHHHHHh
Confidence 556777999999999999999976
No 320
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=89.29 E-value=0.079 Score=43.58 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 271 l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 271 LRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4456669999999999999998764
No 321
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=89.27 E-value=0.29 Score=39.28 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=27.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+...
T Consensus 249 l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 249 MYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 55677799999999999999999999876544
No 322
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=89.27 E-value=0.31 Score=40.15 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=28.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+..+|++.+|..||++.++++.|..+....
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 3556778999999999999999999998876543
No 323
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=89.23 E-value=0.25 Score=39.43 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=27.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|+..+|..||++.++++.|..+...
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 55677799999999999999999999877543
No 324
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=89.03 E-value=0.066 Score=43.49 Aligned_cols=25 Identities=28% Similarity=0.531 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 246 ~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 246 FRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHccCChhHCcCHHHHhhC
Confidence 4556779999999999999998753
No 325
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=88.86 E-value=0.26 Score=39.52 Aligned_cols=33 Identities=9% Similarity=0.035 Sum_probs=28.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|..||++.++++.|..+...
T Consensus 252 ~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 252 EFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 355677799999999999999999999887654
No 326
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=88.85 E-value=0.26 Score=39.65 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=27.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+...
T Consensus 261 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 261 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 55677799999999999999999999887654
No 327
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=88.84 E-value=0.3 Score=38.87 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=27.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+..+|++.+|..||++.++++.|..+..
T Consensus 250 l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 250 VYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 5567779999999999999999999987654
No 328
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.80 E-value=2.3 Score=27.48 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
+.|..+..+|...=+.|+|++|+.+|.++|+.
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34667778888888889999998888888754
No 329
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=88.77 E-value=0.28 Score=39.13 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=27.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+...|++.+|..||++.++++.|..+..
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 5567779999999999999999999987654
No 330
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=88.76 E-value=0.25 Score=41.80 Aligned_cols=37 Identities=5% Similarity=0.016 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
..-..+..+...|+..+|..||++.++++.+..+...
T Consensus 274 ~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 3334456688899999999999999999999876543
No 331
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=88.74 E-value=2.3 Score=26.78 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=26.5
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHccCCC
Q 025537 150 KKHGDTAFRAKDFSTAIDCYTQFIDGGTM 178 (251)
Q Consensus 150 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 178 (251)
...|..++..|++++|+.+|.+||...|.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999886
No 332
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=88.70 E-value=0.29 Score=38.90 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=28.0
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|..||++.++++.|+.+...
T Consensus 238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 355677799999999999999999999877544
No 333
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=88.53 E-value=0.29 Score=40.08 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=26.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
+..+...|++.+|..||++.++++.|..+..
T Consensus 296 l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 296 IYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 5567779999999999999999999987654
No 334
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=88.50 E-value=0.3 Score=41.11 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=28.7
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 3556777999999999999999999999876543
No 335
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=88.35 E-value=0.056 Score=43.20 Aligned_cols=24 Identities=17% Similarity=0.177 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 239 ~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 239 AKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHcccCHhhCCCHHHHhc
Confidence 456777999999999999998875
No 336
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=88.29 E-value=0.29 Score=39.57 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=27.3
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
.+..+..+|++.+|..||++.++++.|+.+..
T Consensus 280 ~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 35667789999999999999999999987643
No 337
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=88.26 E-value=0.27 Score=39.92 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=27.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
.+..+...|++.+|..||++.++++.|..+..
T Consensus 275 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 35567779999999999999999999987653
No 338
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=88.21 E-value=0.32 Score=39.39 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=27.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+...
T Consensus 280 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 55667799999999999999999999877543
No 339
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=88.11 E-value=0.3 Score=39.04 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=26.8
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
.+..+...|+..+|..||++.++++.|..+..
T Consensus 253 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 253 DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 35567779999999999999999999987653
No 340
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=87.99 E-value=0.34 Score=38.86 Aligned_cols=34 Identities=18% Similarity=0.364 Sum_probs=28.7
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 256 ~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 3556777999999999999999999998876553
No 341
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=87.99 E-value=0.33 Score=39.19 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=27.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.++++.|..+...
T Consensus 277 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 277 MYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 55677799999999999999999999876543
No 342
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=87.98 E-value=0.37 Score=39.05 Aligned_cols=33 Identities=24% Similarity=0.453 Sum_probs=28.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|+..+|..||++.+++..|..+...
T Consensus 277 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 356677799999999999999999999887554
No 343
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=87.89 E-value=0.15 Score=42.74 Aligned_cols=24 Identities=29% Similarity=0.531 Sum_probs=20.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||+..++++
T Consensus 253 ~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 445666999999999999999875
No 344
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=87.84 E-value=0.094 Score=41.93 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHcccChhhCCCHHHHhcC
Confidence 4566779999999999999999764
No 345
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=87.83 E-value=0.3 Score=39.82 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=27.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|+.+...
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 55677799999999999999999999877544
No 346
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=87.62 E-value=4.8 Score=29.57 Aligned_cols=62 Identities=8% Similarity=0.006 Sum_probs=47.6
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHccCCCC--CHHHHHHH------HHHHHhcCCHHHHHHHHHHHHhh
Q 025537 149 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARR------CLSYLMNDMPQEALGDAMQAQVV 210 (251)
Q Consensus 149 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~------a~~~~~~~~~~~A~~~~~~al~~ 210 (251)
.+..|..+|..|+|-+|-+.++.+....+.. ...+|..+ |..+.+.|++..|...+.+|+..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4577899999999999999999999887652 23333322 33455689999999999999873
No 347
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=87.56 E-value=0.2 Score=40.47 Aligned_cols=24 Identities=17% Similarity=0.162 Sum_probs=20.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..|||..++++
T Consensus 239 ~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 239 AAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHc
Confidence 345666999999999999999875
No 348
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=87.55 E-value=0.36 Score=38.58 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=28.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++++.|..+....
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 3556777999999999999999999999876554
No 349
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=87.44 E-value=0.089 Score=42.53 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=20.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 269 l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 269 LKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHhhcChhhCCCHHHHhc
Confidence 556677999999999999998864
No 350
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=87.43 E-value=0.28 Score=41.13 Aligned_cols=33 Identities=18% Similarity=0.446 Sum_probs=28.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+...|++.+|..||++.++++.|..+....
T Consensus 315 l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 315 VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 556778999999999999999999998876554
No 351
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=87.43 E-value=0.4 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.436 Sum_probs=28.8
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+..+|++.+|..||++.++++.|+.+....
T Consensus 267 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 267 EVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 3567778999999999999999999999876554
No 352
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=87.36 E-value=0.24 Score=39.59 Aligned_cols=32 Identities=28% Similarity=0.519 Sum_probs=26.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+..+
T Consensus 245 l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 245 LANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp THHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 45567799999999999999999999877544
No 353
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=87.31 E-value=0.33 Score=42.02 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=27.8
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+..+|++.+|..||++.+++..|+.+...
T Consensus 413 ~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 413 ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 355677899999999999999999999876443
No 354
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=87.31 E-value=0.38 Score=39.52 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=28.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+...|++.+|..||++.++++.|..+....
T Consensus 288 l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 556777999999999999999999999876543
No 355
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=87.22 E-value=0.036 Score=46.59 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=20.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 329 ~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 329 VKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 455667999999999999999874
No 356
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=87.21 E-value=0.36 Score=39.61 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=27.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
.+..+...|++.+|..||++.++++.|..+...
T Consensus 304 ~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 304 ELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 355677799999999999999999999887544
No 357
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.20 E-value=1.1 Score=29.34 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=24.4
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
.+..+..+|..+-..|+|++|+.+|..+|+.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556677777788889999999999888754
No 358
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=87.13 E-value=0.21 Score=40.88 Aligned_cols=25 Identities=16% Similarity=0.182 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.+++..
T Consensus 249 ~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 249 AKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcC
Confidence 5567779999999999999988763
No 359
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=86.86 E-value=0.085 Score=44.03 Aligned_cols=25 Identities=24% Similarity=0.539 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 282 l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 282 FRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHcccChhhCcCHHHHhhC
Confidence 4456669999999999999998764
No 360
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=86.08 E-value=0.35 Score=41.55 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=22.5
Q ss_pred HHHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 43 TELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 43 ~~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
..+..+..+|++.+|..||++.++++
T Consensus 270 ~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 270 AEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 45667888999999999999999975
No 361
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=86.01 E-value=0.49 Score=39.81 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=27.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.++++.|..+...
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 55667799999999999999999999887554
No 362
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=85.86 E-value=0.49 Score=38.63 Aligned_cols=33 Identities=18% Similarity=0.446 Sum_probs=28.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
+..+...|++.+|..||++.++++.|..+....
T Consensus 274 l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 274 VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 556777999999999999999999998776543
No 363
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=85.66 E-value=0.51 Score=40.77 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=27.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.+++..|+.+...
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 45566799999999999999999999887643
No 364
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=85.59 E-value=0.13 Score=42.00 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|+..+|..||++.++++.
T Consensus 263 l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 263 FQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhccChhhCCCHHHHhhC
Confidence 4456679999999999999998763
No 365
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=85.43 E-value=0.16 Score=41.72 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 264 ATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHcCCChhhCcCHHHHhCC
Confidence 4566779999999999999988653
No 366
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=85.41 E-value=0.51 Score=38.75 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=26.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+...|++.+|..||++.++++.|..+...
T Consensus 304 l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 304 IYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 55677799999999999999999999876543
No 367
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=85.20 E-value=1.4 Score=29.22 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=23.0
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
.|..+..+|...-+.|+|++|+.+|..+++.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3556667777777888888888888877754
No 368
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=85.16 E-value=1.5 Score=38.03 Aligned_cols=90 Identities=10% Similarity=-0.039 Sum_probs=64.3
Q ss_pred hcCHHHHHHHHHHHHccC-----CC--CC---H-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC----------C
Q 025537 159 AKDFSTAIDCYTQFIDGG-----TM--VS---P-----TVYARRCLSYLMNDMPQEALGDAMQAQVVSP----------D 213 (251)
Q Consensus 159 ~~~~~~A~~~~~~al~~~-----p~--~~---~-----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p----------~ 213 (251)
....++|.....++.... |+ .+ . -+.+++..+|+++++..-+-..++..-...+ +
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 445677888888877541 11 11 1 1345677899999999888777754322222 2
Q ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh-hhhc
Q 025537 214 WPTALYLQAACLFSLGMENDARETLKDGTNL-EAKK 248 (251)
Q Consensus 214 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l-~P~~ 248 (251)
.+..+|.+|..+...++|.+|.+++..|++. .|..
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3577899999999999999999999999998 8754
No 369
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=85.09 E-value=1.4 Score=28.52 Aligned_cols=31 Identities=13% Similarity=0.095 Sum_probs=23.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
.|..+..+|...-..|+|++|+.+|..++++
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4556667777777888999999888888764
No 370
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=84.95 E-value=7.3 Score=28.06 Aligned_cols=79 Identities=14% Similarity=0.110 Sum_probs=43.0
Q ss_pred hcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHH
Q 025537 159 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARET 237 (251)
Q Consensus 159 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~ 237 (251)
-|+...-+.+|-+.= . +.+ |.++|.-++ ..|+-++--..+...+.-++-++..++.+|.+|.++|+..+|.+.
T Consensus 74 C~NlKrVi~C~~~~n-~----~se-~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eL 147 (172)
T 1wy6_A 74 CQNLKSVVECGVINN-T----LNE-HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTL 147 (172)
T ss_dssp CSCTHHHHHHHHHTT-C----CCH-HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhcHHHHHHHHHHhc-c----hHH-HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHH
Confidence 345555566655421 1 111 334444333 444444444444443455555677777777777777777777777
Q ss_pred HHHHHh
Q 025537 238 LKDGTN 243 (251)
Q Consensus 238 ~~~al~ 243 (251)
..+|.+
T Consensus 148 l~~AC~ 153 (172)
T 1wy6_A 148 LIEACK 153 (172)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 371
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.94 E-value=1.3 Score=29.21 Aligned_cols=28 Identities=18% Similarity=0.356 Sum_probs=23.5
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHH
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFI 173 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al 173 (251)
|..+-.++..+.+.|+|++||.+..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 6666788899999999999998887765
No 372
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=84.86 E-value=0.59 Score=38.15 Aligned_cols=32 Identities=25% Similarity=0.511 Sum_probs=27.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|+..+|..||++.++++.|..+...
T Consensus 270 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 270 VYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 55677799999999999999999999877554
No 373
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=84.72 E-value=0.58 Score=40.41 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=27.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.+++..|+.+...
T Consensus 410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 55677799999999999999999999876543
No 374
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=84.47 E-value=0.5 Score=39.03 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=25.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSL 73 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~ 73 (251)
.+..+...|++.+|..||++.++++.|..+
T Consensus 297 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 297 EIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 355666799999999999999999999754
No 375
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=84.46 E-value=0.27 Score=41.72 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 281 ~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 281 AKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhhC
Confidence 4567779999999999999998753
No 376
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=84.37 E-value=1.5 Score=30.50 Aligned_cols=31 Identities=10% Similarity=0.253 Sum_probs=22.9
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
.|..+..+|...=..|+|++|+.+|..|+++
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3555666677777788888888888887754
No 377
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=84.30 E-value=0.18 Score=42.24 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=19.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|+..+|..||+..++++
T Consensus 300 ~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 300 LKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345566999999999999988764
No 378
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=83.89 E-value=0.6 Score=37.89 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=25.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQ 74 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~ 74 (251)
+..+..+|++.+|..||++.++++.|..+.
T Consensus 269 l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 269 LFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 556677999999999999999999997653
No 379
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=83.83 E-value=6.1 Score=35.70 Aligned_cols=89 Identities=15% Similarity=0.016 Sum_probs=61.1
Q ss_pred HhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHH
Q 025537 153 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMEN 232 (251)
Q Consensus 153 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~ 232 (251)
|..++..+...++...+.+......+ .....-++-..++.|++..|...+.+.-.-........|-+|.++..+|+.+
T Consensus 259 a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~ 336 (618)
T 1qsa_A 259 AWRLMGNDVTDEQAKWRDDAIMRSQS--TSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (618)
T ss_dssp HHTSCSTTCCHHHHHHHHHHHHTCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCChHHHHHHHhccccCCC--hHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHH
Confidence 33344445355677777776654433 2223233333456799999999887755543456888999999999999999
Q ss_pred HHHHHHHHHHh
Q 025537 233 DARETLKDGTN 243 (251)
Q Consensus 233 ~A~~~~~~al~ 243 (251)
+|...|+++.+
T Consensus 337 ~a~~~~~~~a~ 347 (618)
T 1qsa_A 337 EAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998874
No 380
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=83.50 E-value=2.1 Score=28.16 Aligned_cols=27 Identities=22% Similarity=0.138 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 025537 182 TVYARRCLSYLMNDMPQEALGDAMQAQ 208 (251)
Q Consensus 182 ~~~~~~a~~~~~~~~~~~A~~~~~~al 208 (251)
-.+..++..+++.|+|++||+...+|.
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 345556666666666666666665543
No 381
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=81.43 E-value=0.2 Score=40.80 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH-HHHh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI-SLMS 72 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~-~L~~ 72 (251)
+..+..+|++.+|..||+..+++. .|..
T Consensus 250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 250 LDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 456677999999999997776654 4443
No 382
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=81.17 E-value=0.41 Score=41.40 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 244 ~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcC
Confidence 4456679999999999999998764
No 383
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.15 E-value=2.9 Score=35.84 Aligned_cols=66 Identities=9% Similarity=-0.081 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC---CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 180 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP---DWPTALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 180 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
-..++..+|..|+..|++++|+..+.++..... .-...++....++...+++..+...+.++..+-
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 455788899999999999999999999887533 336888888899999999999999999987654
No 384
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=81.05 E-value=0.34 Score=41.75 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=19.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|+..+|..||+..++++
T Consensus 377 ~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 377 LKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345566999999999999988764
No 385
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=80.62 E-value=0.92 Score=40.15 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=27.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..||++.+++..|+.+...
T Consensus 493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 45667799999999999999999999876433
No 386
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.67 E-value=7.6 Score=37.77 Aligned_cols=90 Identities=13% Similarity=0.028 Sum_probs=66.1
Q ss_pred HHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-h--------------------
Q 025537 152 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV-V-------------------- 210 (251)
Q Consensus 152 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~-------------------- 210 (251)
....++..+.++-|..+. ...|. ++..-+-+|.+++..|++++|...|.+|-. +
T Consensus 818 l~~~l~~~~~~~~~~~l~----~~~~~-~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQLI----GWLNS-DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHSCTTHHHHHH----HHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHhhhHHHHHHHh----hhccC-CcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 344566777777665532 34455 666667899999999999999999988721 0
Q ss_pred --CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhh
Q 025537 211 --SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 246 (251)
Q Consensus 211 --~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~P 246 (251)
....+..|+.....+...+.++.+++..+.||+..+
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 111346677788889999999999999999997654
No 387
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=79.54 E-value=1.1 Score=36.50 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=28.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhhhc
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 77 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~~ 77 (251)
.+..+...|++.+|..||++.++.+.|..+....
T Consensus 250 ~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 250 EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 4666777999999999999999999998765543
No 388
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=79.38 E-value=2.6 Score=26.53 Aligned_cols=29 Identities=10% Similarity=0.106 Sum_probs=21.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 219 YLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
..+|..+...|++++|..+|-+|+.+.|+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45677777777777777777777777664
No 389
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=78.61 E-value=5.2 Score=33.99 Aligned_cols=60 Identities=18% Similarity=0.080 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCC------CChHHHHHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 025537 186 RRCLSYLMNDMPQEALGDAMQAQVVSP------DWPTALYLQAACLFSLGMENDARETLKDGTNLE 245 (251)
Q Consensus 186 ~~a~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 245 (251)
.+|..|+..|+|.+|+..+.+.++.-. .-.+.+.....+|..++++..+...|.+|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 689999999999999999998877421 125667888999999999999999999987653
No 390
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=78.02 E-value=27 Score=28.54 Aligned_cols=91 Identities=12% Similarity=-0.065 Sum_probs=52.0
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHcc----CCCCCHHHHHHHHHHHHhcCCHH-HHHHHHHHHHhhC-------CCChHH
Q 025537 150 KKHGDTAFRAKDFSTAIDCYTQFIDG----GTMVSPTVYARRCLSYLMNDMPQ-EALGDAMQAQVVS-------PDWPTA 217 (251)
Q Consensus 150 ~~~g~~~~~~~~~~~A~~~~~~al~~----~p~~~~~~~~~~a~~~~~~~~~~-~A~~~~~~al~~~-------p~~~~~ 217 (251)
+.-+..+++.|++.-|.++-.-.|+. ....+.....++..++.....-. .-....++|++.. -.++..
T Consensus 57 ~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~L 136 (312)
T 2wpv_A 57 SQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYL 136 (312)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHH
T ss_pred HHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHH
Confidence 33344445666666555442222211 11113444445555554433221 2244455555532 247899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHH
Q 025537 218 LYLQAACLFSLGMENDARETLKD 240 (251)
Q Consensus 218 ~~~~g~~~~~~~~~~~A~~~~~~ 240 (251)
|..+|..|..-|++.+|..+|-.
T Consensus 137 H~~~a~~~~~e~~~~~A~~H~i~ 159 (312)
T 2wpv_A 137 HNTIGSKLLEGDFVYEAERYFML 159 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHhhcCCHHHHHHHHHh
Confidence 99999999999999999999863
No 391
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=77.81 E-value=0.88 Score=39.72 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 268 ~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 268 AKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHHCCCChhhCccHHHHhcC
Confidence 4456679999999999999998753
No 392
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.62 E-value=12 Score=35.54 Aligned_cols=88 Identities=15% Similarity=0.064 Sum_probs=59.8
Q ss_pred HHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-hC-------------------
Q 025537 152 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV-VS------------------- 211 (251)
Q Consensus 152 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~------------------- 211 (251)
....+...|.++-|.+ .+...|. ++..-+-+|.+|+..|++++|..+|++|-. +.
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~-t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNS-DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCS-SHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 4555666777765433 4455665 665556788888888888888888887531 11
Q ss_pred -CC--ChHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Q 025537 212 -PD--WPTALYLQAACLFSLGMENDARETLKDGTNL 244 (251)
Q Consensus 212 -p~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 244 (251)
+. ....|.+....+...+-|+.++...+.||+.
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~ 926 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADAS 926 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 11 1236677788888888888888888888864
No 393
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=76.47 E-value=1.9 Score=35.84 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 39 NDEGTELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 39 ~~~~~~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+.-..+..+..+|++.+|..||++.++++
T Consensus 362 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 362 QEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 444556778999999999999999999875
No 394
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=76.47 E-value=6.6 Score=29.95 Aligned_cols=54 Identities=13% Similarity=-0.013 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHH-----HHHHHHHHHhcCCH
Q 025537 143 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV-----YARRCLSYLMNDMP 197 (251)
Q Consensus 143 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~-----~~~~a~~~~~~~~~ 197 (251)
.+.+...+..|..++.+++|.+|...+.+|++..|. .... +..+--+.+.+|+.
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~-~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHR-SSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCT-TCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCH-hHHHHHHHHHHHHHHHHHHcCCC
Confidence 355788999999999999999999999999999886 4332 23333444557774
No 395
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=76.19 E-value=1.7 Score=39.64 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=27.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHHHHhhhh
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVISLMSLQK 75 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~ 75 (251)
.+..+..+|+..+|..||++.++++.|..+..
T Consensus 620 ~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 620 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 35567779999999999999999999987653
No 396
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.13 E-value=5.6 Score=35.05 Aligned_cols=69 Identities=10% Similarity=-0.099 Sum_probs=54.2
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-VS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW 214 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 214 (251)
+..+.-.-..|...+.|++|..+.+++.-.... .+ ...++..|.++...++|.+|.+++..|++..|..
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 556666777788889999999999998522111 01 4567788999999999999999999999988754
No 397
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=75.66 E-value=1.5 Score=35.31 Aligned_cols=25 Identities=24% Similarity=0.420 Sum_probs=21.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 261 ~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 261 ALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHccCChhhcCCHHHHhcC
Confidence 5667889999999999999998753
No 398
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=75.00 E-value=2.6 Score=34.77 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 38 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 38 ~~~~~~~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+...-..+..+..+|++.+|..||++.++++.
T Consensus 303 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 33444567788899999999999999998763
No 399
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=74.87 E-value=4.5 Score=36.85 Aligned_cols=50 Identities=0% Similarity=-0.009 Sum_probs=45.3
Q ss_pred HHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCC
Q 025537 146 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM 196 (251)
Q Consensus 146 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~ 196 (251)
++....+|..++..|+|.-|.++.+.++..+|+ |..+..-++.+|-++|.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~-~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHH
Confidence 667888999999999999999999999999998 99999999999988773
No 400
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=74.58 E-value=2.9 Score=27.75 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=26.1
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHccCCC
Q 025537 150 KKHGDTAFRAKDFSTAIDCYTQFIDGGTM 178 (251)
Q Consensus 150 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 178 (251)
...|..++..|+++.|+.+|.+||...|.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999875
No 401
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=74.25 E-value=6.8 Score=25.52 Aligned_cols=33 Identities=9% Similarity=0.260 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhHHHhhcCHHHHHHHHHHHHccC
Q 025537 144 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG 176 (251)
Q Consensus 144 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 176 (251)
..+..+...|..+|+.++|.+|..+|+++..+.
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 567888899999999999999999999988554
No 402
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=73.52 E-value=1.8 Score=34.11 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=21.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 238 l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 238 VATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHHhC
Confidence 5567779999999999999999874
No 403
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=72.77 E-value=8.6 Score=25.36 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=41.1
Q ss_pred HHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHH---HHH--HHHHHhcCCHHHHHHHHHHHHh
Q 025537 150 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVY---ARR--CLSYLMNDMPQEALGDAMQAQV 209 (251)
Q Consensus 150 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~---~~~--a~~~~~~~~~~~A~~~~~~al~ 209 (251)
...|..+|..|+|-+|-+.++.+....|+....+| .++ |..+.+.|+. |...+.+|+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 35688899999999999999999887764222333 223 3444456777 8888888876
No 404
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=72.66 E-value=2.5 Score=35.29 Aligned_cols=28 Identities=14% Similarity=0.120 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 41 EGTELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 41 ~~~~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+...+..+..+|++.+|..|||+.++++
T Consensus 345 ~~~~~~dli~~mL~~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 345 DYLKFKDLILRMLDYDPKTRIQPYYALQ 372 (382)
T ss_dssp HHHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred hhHHHHHHHHHhcCCChhhCCCHHHHhc
Confidence 3446778888999999999999999865
No 405
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=72.08 E-value=2.3 Score=33.50 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=21.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|+..+|..||++.++++
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHh
Confidence 556778999999999999999986
No 406
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=71.63 E-value=2 Score=34.06 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=21.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+...|++.+|..||++.++++.
T Consensus 259 ~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 259 VEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 35567779999999999999999864
No 407
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=71.42 E-value=26 Score=25.24 Aligned_cols=54 Identities=6% Similarity=-0.071 Sum_probs=41.6
Q ss_pred HHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 025537 156 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV 210 (251)
Q Consensus 156 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 210 (251)
+-.+|+-++--..+...+.-.+- ++.++..+|.+|.++|+..+|-+...+|-+-
T Consensus 101 lv~~~KkDqLdki~~~~l~n~~~-~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILKNNEV-SASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC--CCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHhccHhHHHHHHHHHhccCCC-ChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 45567777777777776555543 7999999999999999999999998888763
No 408
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=71.17 E-value=1.9 Score=38.57 Aligned_cols=24 Identities=8% Similarity=0.047 Sum_probs=19.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||+..++++
T Consensus 387 ~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 387 GKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 345566999999999999998865
No 409
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=70.39 E-value=7.9 Score=24.88 Aligned_cols=18 Identities=17% Similarity=0.108 Sum_probs=8.2
Q ss_pred HhCCCHHHHHHHHHHHHh
Q 025537 226 FSLGMENDARETLKDGTN 243 (251)
Q Consensus 226 ~~~~~~~~A~~~~~~al~ 243 (251)
-..|+|++|+..|..|++
T Consensus 30 D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 344444444444444443
No 410
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=70.26 E-value=4.3 Score=26.90 Aligned_cols=29 Identities=10% Similarity=0.106 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 219 YLQAACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
..+|..+...|+++.|+.+|-+|+.+.|+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 44566677777777777777777776664
No 411
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=70.00 E-value=2.4 Score=33.48 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=21.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 234 ~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 234 ARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHhccChhhCCCHHHHhhC
Confidence 4456779999999999999999875
No 412
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=69.61 E-value=2 Score=34.74 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=22.5
Q ss_pred HHHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 43 TELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 43 ~~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
..+..+..+|++.+|..||++.++++
T Consensus 303 ~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 303 ERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHhCcCcccccCHHHHhc
Confidence 45677888999999999999999875
No 413
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=69.58 E-value=1.5 Score=34.51 Aligned_cols=25 Identities=16% Similarity=0.162 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|.+||++.++++.
T Consensus 239 ~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 239 AAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 4566779999999999999998753
No 414
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=69.57 E-value=2.5 Score=33.85 Aligned_cols=25 Identities=16% Similarity=0.208 Sum_probs=21.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 233 ~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 233 VKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcccChhhCCCHHHHhcC
Confidence 5567779999999999999999864
No 415
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=69.56 E-value=2.8 Score=33.64 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 260 ~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 260 CCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4567779999999999999999864
No 416
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=69.55 E-value=6.3 Score=25.08 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=22.2
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHcc
Q 025537 149 SKKHGDTAFRAKDFSTAIDCYTQFIDG 175 (251)
Q Consensus 149 ~~~~g~~~~~~~~~~~A~~~~~~al~~ 175 (251)
....|..+...|+|+.|+.+|+.++..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 346677788889999999999998854
No 417
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.39 E-value=3.5 Score=28.42 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 197 PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 197 ~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
|++|..+.++||.++-. |+-+.|++.|+++|+
T Consensus 19 h~~AF~~Is~AL~~DE~---------------g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDEL---------------GQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHH---------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhc---------------CCHHHHHHHHHHHHH
No 418
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=69.26 E-value=3.1 Score=33.18 Aligned_cols=25 Identities=20% Similarity=0.196 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 240 l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 240 LSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 4567779999999999999999864
No 419
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=69.10 E-value=3.1 Score=33.39 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 272 ~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 272 AKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcC
Confidence 5567789999999999999998763
No 420
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.02 E-value=19 Score=34.29 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=42.2
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 025537 187 RCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGT 242 (251)
Q Consensus 187 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 242 (251)
++..+...|.++-|. ..+..-|.++..-|-+|.+|...|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 455566777776543 4567888888888999999999999999999999874
No 421
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=68.94 E-value=2.1 Score=34.80 Aligned_cols=25 Identities=20% Similarity=0.343 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 270 ~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 270 CQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 5567779999999999999999763
No 422
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=68.88 E-value=1.7 Score=35.28 Aligned_cols=26 Identities=23% Similarity=0.558 Sum_probs=21.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+..+|++.+|..||++.++++.
T Consensus 261 ~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 261 SFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 35667779999999999999999763
No 423
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=68.76 E-value=1.7 Score=35.81 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=21.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+...|++.+|..||++.++++
T Consensus 331 ~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 331 LFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhc
Confidence 4557888999999999999999864
No 424
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=68.60 E-value=7.2 Score=25.03 Aligned_cols=16 Identities=25% Similarity=0.165 Sum_probs=7.4
Q ss_pred hCCCHHHHHHHHHHHH
Q 025537 227 SLGMENDARETLKDGT 242 (251)
Q Consensus 227 ~~~~~~~A~~~~~~al 242 (251)
..|+|++|+..|..|+
T Consensus 23 ~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 23 KEGKVEDAITYYKKAI 38 (83)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHH
Confidence 4444444444444444
No 425
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=68.13 E-value=2.8 Score=33.30 Aligned_cols=24 Identities=25% Similarity=0.278 Sum_probs=20.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 257 ~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 257 GIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCCcccCCCHHHHhc
Confidence 456777999999999999998875
No 426
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=67.86 E-value=2.8 Score=33.60 Aligned_cols=25 Identities=16% Similarity=0.034 Sum_probs=21.2
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|..||++.++++
T Consensus 272 ~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 272 SGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHhcCCCccCCCHHHHhc
Confidence 3556777999999999999999875
No 427
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=67.84 E-value=51 Score=27.22 Aligned_cols=59 Identities=7% Similarity=-0.165 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhcCCH-HHHHHHHHHHHhh-------CCCChHHHHHHHHHHHhCCCHHHHHHHHH
Q 025537 181 PTVYARRCLSYLMNDMP-QEALGDAMQAQVV-------SPDWPTALYLQAACLFSLGMENDARETLK 239 (251)
Q Consensus 181 ~~~~~~~a~~~~~~~~~-~~A~~~~~~al~~-------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~ 239 (251)
.....++..++.....- ..-....++||+. .-.+++.|..+|..|...++|.+|..+|-
T Consensus 94 ~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 94 GASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 34444555555554431 1223344444443 22478999999999999999999999884
No 428
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=67.65 E-value=2.3 Score=34.66 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=22.4
Q ss_pred HHHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 43 TELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 43 ~~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
..+..+..+|+..+|..||++.++++
T Consensus 308 ~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 308 VQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 35667888999999999999999874
No 429
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=67.44 E-value=2.4 Score=34.08 Aligned_cols=25 Identities=24% Similarity=0.538 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 260 l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 260 FQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHccCChhHCcCHHHHhhC
Confidence 4556679999999999999999753
No 430
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=67.32 E-value=1.9 Score=34.47 Aligned_cols=26 Identities=35% Similarity=0.520 Sum_probs=22.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISL 70 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L 70 (251)
+..+...|++.+|..||++.++++..
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 55677799999999999999998753
No 431
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=67.28 E-value=18 Score=27.51 Aligned_cols=37 Identities=8% Similarity=-0.260 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHH
Q 025537 181 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTA 217 (251)
Q Consensus 181 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 217 (251)
...++.+|..++..++|.+|-+++..|++..|.....
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHH
Confidence 4567788999999999999999999999998876543
No 432
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=66.84 E-value=2.5 Score=33.09 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=20.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+...|++.+|..||++.++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 238 PLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCCchhCCCHHHHhc
Confidence 456777999999999999998865
No 433
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=66.80 E-value=2.8 Score=33.89 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+...|++.+|..||++.++++
T Consensus 295 ~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 295 EALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 3566777999999999999999876
No 434
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=66.64 E-value=2 Score=35.06 Aligned_cols=24 Identities=33% Similarity=0.704 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 287 ~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 287 FVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHccCCcccCcCHHHHhc
Confidence 556777999999999999999876
No 435
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=66.59 E-value=26 Score=29.42 Aligned_cols=31 Identities=6% Similarity=-0.064 Sum_probs=19.2
Q ss_pred CCChHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 025537 212 PDWPTALYLQAACLFSLGMENDARETLKDGT 242 (251)
Q Consensus 212 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 242 (251)
..+.--|..+|..++..+++.+|+..+..|-
T Consensus 293 n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 293 DHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 3455556666666666677766666665543
No 436
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=66.56 E-value=2.9 Score=33.48 Aligned_cols=25 Identities=16% Similarity=0.153 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 282 AVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCccccCCHHHHhCC
Confidence 5567779999999999999999763
No 437
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=66.50 E-value=1.8 Score=35.35 Aligned_cols=19 Identities=16% Similarity=0.116 Sum_probs=15.4
Q ss_pred HHHHHhcccCcCCCCCCCH
Q 025537 45 LVRLASRCLQSEARERPNA 63 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m 63 (251)
+..+..+|++.+|..||+.
T Consensus 253 ~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 253 AQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHHHHHHHTCSSGGGSTTC
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 4456669999999999984
No 438
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=66.05 E-value=3.2 Score=33.50 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=21.3
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|..||++.++++
T Consensus 276 ~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 276 EGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3556777999999999999999875
No 439
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=65.94 E-value=4.5 Score=32.26 Aligned_cols=31 Identities=19% Similarity=0.267 Sum_probs=26.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHHHHhhhhh
Q 025537 45 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 76 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~L~~~~~~ 76 (251)
+..+..+|++.+|..| ++.++++.|..+...
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 5567779999999999 999999999876543
No 440
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=65.92 E-value=3.2 Score=32.90 Aligned_cols=24 Identities=17% Similarity=0.050 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 253 ~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 253 AKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcccChhhCcCHHHHhc
Confidence 556777999999999999999986
No 441
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=65.87 E-value=2.7 Score=33.50 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=20.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 252 l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 252 FRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHcccChhhCCCHHHHhc
Confidence 456677999999999999988765
No 442
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=65.86 E-value=2.6 Score=33.97 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.3
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|.+||++.++++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 3456778999999999999999875
No 443
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=65.42 E-value=3.3 Score=33.75 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 248 ~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 248 AKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 4556779999999999999998763
No 444
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=65.26 E-value=2.7 Score=35.00 Aligned_cols=24 Identities=13% Similarity=0.026 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 336 ~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 336 VRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHHcCCCchhCCCHHHHhh
Confidence 556667999999999999999986
No 445
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=65.04 E-value=3.3 Score=33.85 Aligned_cols=25 Identities=16% Similarity=0.192 Sum_probs=21.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 4566779999999999999999874
No 446
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=65.02 E-value=40 Score=27.66 Aligned_cols=99 Identities=16% Similarity=0.055 Sum_probs=54.4
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHccCC----CCC---HHH--HHHHHHHHH-----h-----c--CCHHHHHHHHH--
Q 025537 149 SKKHGDTAFRAKDFSTAIDCYTQFIDGGT----MVS---PTV--YARRCLSYL-----M-----N--DMPQEALGDAM-- 205 (251)
Q Consensus 149 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p----~~~---~~~--~~~~a~~~~-----~-----~--~~~~~A~~~~~-- 205 (251)
..+.|-.++..|+|.+|+..|...|..-| +.. .++ +...+.-|. . + .+..+.++..-
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 45679999999999999999999875422 101 111 111111111 1 1 11122222111
Q ss_pred HHHhhCCCChHHHHHHH-HHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 206 QAQVVSPDWPTALYLQA-ACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 206 ~al~~~p~~~~~~~~~g-~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
.-.++.|.+-..-.+.| ...++.++|.-|....++.|++.|+
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 239 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISS 239 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 11234554443333433 3467888888888888888888874
No 447
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=64.61 E-value=12 Score=24.18 Aligned_cols=26 Identities=12% Similarity=-0.069 Sum_probs=13.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Q 025537 184 YARRCLSYLMNDMPQEALGDAMQAQV 209 (251)
Q Consensus 184 ~~~~a~~~~~~~~~~~A~~~~~~al~ 209 (251)
+...|.-.-..|+|++|+..|..|++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34444444555555555555555553
No 448
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=64.54 E-value=1.5 Score=35.78 Aligned_cols=26 Identities=27% Similarity=0.560 Sum_probs=21.9
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+..+|++.+|..||++.++++.
T Consensus 282 ~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 282 VVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcC
Confidence 35667789999999999999988753
No 449
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=64.35 E-value=3.2 Score=34.19 Aligned_cols=25 Identities=24% Similarity=0.557 Sum_probs=21.4
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 301 ~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 301 FQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhhcChhhCCCHHHHhhC
Confidence 5566779999999999999999764
No 450
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=64.19 E-value=3.3 Score=35.32 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=21.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..|||+.++++.
T Consensus 385 ~~dli~~~L~~dP~~Rpta~e~L~H 409 (429)
T 3kvw_A 385 FLDFLKQCLEWDPAVRMTPGQALRH 409 (429)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHCCCChhhCCCHHHHhCC
Confidence 5667789999999999999999763
No 451
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=64.17 E-value=3.7 Score=33.18 Aligned_cols=25 Identities=12% Similarity=0.211 Sum_probs=21.4
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|..||++.++++
T Consensus 250 ~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 250 KALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHcccCHhhCCCHHHHhh
Confidence 3556777999999999999999875
No 452
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=64.16 E-value=4.2 Score=33.07 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=21.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|+..+|..||++.++++.
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 5567779999999999999999874
No 453
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=63.98 E-value=3.7 Score=32.57 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 260 ~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 260 GRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhcCcCcccCCCHHHHhc
Confidence 456777999999999999998876
No 454
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=63.75 E-value=2.8 Score=34.29 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 282 GIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcC
Confidence 4567789999999999999998763
No 455
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=63.72 E-value=3 Score=33.95 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=21.3
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|..||++.++++
T Consensus 294 ~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 294 EGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhC
Confidence 3456778999999999999999875
No 456
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=63.54 E-value=4.6 Score=32.85 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|.+||++.++++.
T Consensus 307 ~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 307 ARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcC
Confidence 4556779999999999999999763
No 457
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=63.47 E-value=1.3 Score=36.43 Aligned_cols=57 Identities=14% Similarity=0.250 Sum_probs=33.3
Q ss_pred CEEEeecCCC-CCchh---hhHHHHcCCccccccccccCCCCHHHHHHHHHHHhcccCcCCCCCCCHHHHH
Q 025537 1 MLLDLLSGKH-IPPSH---ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 67 (251)
Q Consensus 1 vlLEl~tgr~-~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~va~~C~~~~p~~RP~m~~v~ 67 (251)
||.||+||+. ..... +...+..+.+ .+....+. + +..+..+|++.+|..||+..++.
T Consensus 223 ilyeml~G~~PF~~~~~~~~~~~i~~~~~------~~p~~~s~-~---~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 223 IIYQLVAGLPPFRAGNEGLIFAKIIKLEY------DFPEKFFP-K---ARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHTCC------CCCTTCCH-H---HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCC------CCCcccCH-H---HHHHHHHHccCCHhHCcChHHHc
Confidence 3568888888 54322 2222222221 12222333 2 44566799999999999998864
No 458
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=63.36 E-value=3.7 Score=33.60 Aligned_cols=25 Identities=32% Similarity=0.377 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 251 l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 251 LMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4556679999999999999999875
No 459
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=63.16 E-value=3.9 Score=32.91 Aligned_cols=24 Identities=25% Similarity=0.221 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|+..+|..||++.+++.
T Consensus 273 ~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 273 GKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCCcccCCCHHHHhc
Confidence 456777999999999999999874
No 460
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=63.14 E-value=3.2 Score=32.99 Aligned_cols=24 Identities=17% Similarity=0.101 Sum_probs=20.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 259 ~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 259 GRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhccChhhCCCHHHHhc
Confidence 456677999999999999998875
No 461
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=63.12 E-value=41 Score=24.49 Aligned_cols=86 Identities=12% Similarity=0.095 Sum_probs=55.8
Q ss_pred HHHHHHhHHHhhcCHHHHHHHHHHHHccCCC-CCHHHHHHHHHHHHhcCCHH-HHHHHHHHHHhhCCCChHHHHHHHHHH
Q 025537 148 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMNDMPQ-EALGDAMQAQVVSPDWPTALYLQAACL 225 (251)
Q Consensus 148 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~a~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~~g~~~ 225 (251)
.....++..|-+.+|.+.|..+.. .+|. .....-+-+|..|.+...+. +..+.....+.+. ...- |.+=.+|
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlk--Sde~-yL~YWIy 83 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLK--TDEQ-YMLYWIY 83 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTT--SCHH-HHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCcc--CCHH-HHHHHHH
Confidence 344668889999999999988876 3332 13467788999999988763 3333333333332 2222 2334667
Q ss_pred HhCCCHHHHHHHHH
Q 025537 226 FSLGMENDARETLK 239 (251)
Q Consensus 226 ~~~~~~~~A~~~~~ 239 (251)
...|++++|+..-+
T Consensus 84 iGRg~~~eAlDiA~ 97 (161)
T 2ynq_A 84 IGRSQSEEALELAR 97 (161)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HcCCchHHHHHHHH
Confidence 77899999987544
No 462
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=62.70 E-value=14 Score=33.63 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhCCCH
Q 025537 183 VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 231 (251)
Q Consensus 183 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~ 231 (251)
....+|...+..|+|.-|.+.++.++..+|++..+...++.+|.++|.-
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 4566788888999999999999999999999999999999999998854
No 463
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=61.62 E-value=5.3 Score=31.86 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=25.7
Q ss_pred HHHHHhcccCcCCCCCC-CHHHHHHHHHhhhh
Q 025537 45 LVRLASRCLQSEARERP-NAKSLVISLMSLQK 75 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP-~m~~v~~~L~~~~~ 75 (251)
+..+..+|+..+|..|| ++.++.+.|..+..
T Consensus 244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 244 LSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 55567799999999998 89999999886543
No 464
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=61.54 E-value=2.8 Score=34.37 Aligned_cols=27 Identities=26% Similarity=0.139 Sum_probs=22.7
Q ss_pred HHHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 43 TELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 43 ~~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
..+..+...|++.+|..||++.++++.
T Consensus 289 ~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 289 KEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhccCccccCCHHHHhcC
Confidence 346677889999999999999988753
No 465
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=61.48 E-value=10 Score=30.46 Aligned_cols=33 Identities=6% Similarity=-0.004 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHh
Q 025537 40 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 72 (251)
Q Consensus 40 ~~~~~~~~va~~C~~~~p~~RP~m~~v~~~L~~ 72 (251)
..-..+..+...|++.+|..||++.++++....
T Consensus 274 ~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred hHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 333445668889999999999999999998764
No 466
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=61.26 E-value=3.6 Score=32.96 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|+..+|..||++.++++.
T Consensus 255 l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 255 FTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHccCChhhCcCHHHHHhC
Confidence 5567779999999999999999763
No 467
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=61.21 E-value=15 Score=23.52 Aligned_cols=17 Identities=12% Similarity=0.155 Sum_probs=7.7
Q ss_pred hCCCHHHHHHHHHHHHh
Q 025537 227 SLGMENDARETLKDGTN 243 (251)
Q Consensus 227 ~~~~~~~A~~~~~~al~ 243 (251)
..|+|++|+..|..|++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 33444444444444443
No 468
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=61.19 E-value=3.7 Score=32.20 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+...|++.+|..||++.++++
T Consensus 238 ~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 238 AESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 556677999999999999999875
No 469
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=60.92 E-value=5.4 Score=33.03 Aligned_cols=24 Identities=29% Similarity=0.319 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 336 ~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 336 VKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 556777999999999999999876
No 470
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=60.91 E-value=15 Score=24.10 Aligned_cols=21 Identities=14% Similarity=-0.064 Sum_probs=8.4
Q ss_pred HHHHHhcCCHHHHHHHHHHHH
Q 025537 188 CLSYLMNDMPQEALGDAMQAQ 208 (251)
Q Consensus 188 a~~~~~~~~~~~A~~~~~~al 208 (251)
|.-.-..|+|++|+..|..|+
T Consensus 22 Ave~D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 22 AVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 333333444444444444433
No 471
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=60.69 E-value=3.7 Score=33.50 Aligned_cols=24 Identities=13% Similarity=0.146 Sum_probs=20.8
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 299 l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 299 DIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhc
Confidence 456777999999999999999876
No 472
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=60.52 E-value=3.7 Score=34.23 Aligned_cols=25 Identities=28% Similarity=0.578 Sum_probs=21.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 310 ~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 310 FHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHhhcCcccCCCHHHHhcC
Confidence 5667889999999999999998753
No 473
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=59.65 E-value=4.6 Score=33.38 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=21.5
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 290 ~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 290 ALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcC
Confidence 5667789999999999999998753
No 474
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=59.60 E-value=3.3 Score=33.65 Aligned_cols=25 Identities=28% Similarity=0.264 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 258 ~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 258 GADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHcCcCcccCCCHHHHhcC
Confidence 4567789999999999999998763
No 475
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=59.00 E-value=5.8 Score=32.64 Aligned_cols=25 Identities=8% Similarity=0.094 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4566779999999999999988753
No 476
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=58.99 E-value=4.1 Score=33.52 Aligned_cols=25 Identities=12% Similarity=0.207 Sum_probs=21.6
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 293 ~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 293 ALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHHcC
Confidence 5667789999999999999998753
No 477
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=58.99 E-value=3.4 Score=32.80 Aligned_cols=24 Identities=25% Similarity=0.306 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 260 l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 260 VKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHccCCcccCCCHHHHHh
Confidence 556777999999999999998875
No 478
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=58.72 E-value=4.2 Score=32.04 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=21.1
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+...|++.+|..||++.++++.
T Consensus 239 ~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 239 SKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred HHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 4566779999999999999998763
No 479
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=58.44 E-value=4.7 Score=33.03 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=22.0
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+...|++.+|..||++.++++.
T Consensus 267 ~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 267 DLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHhccChhhCCCHHHHhcC
Confidence 45667779999999999999998764
No 480
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=58.30 E-value=4.4 Score=32.91 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=20.9
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 238 ~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 238 PLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHccCChhhCcCHHHHhhC
Confidence 4567779999999999999988753
No 481
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=58.18 E-value=42 Score=28.75 Aligned_cols=44 Identities=9% Similarity=-0.071 Sum_probs=30.7
Q ss_pred HHHHHHHHHh-----hCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 200 ALGDAMQAQV-----VSPDWPTALYLQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 200 A~~~~~~al~-----~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
++..|.+||. ....+.--|..+|..++..+++.+|+..+..+-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 4555666554 3445677777888888888888888887776643
No 482
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=57.78 E-value=4.2 Score=32.98 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=20.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
...+..+|++.+|..||+..++++
T Consensus 256 ~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 256 EYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345777999999999999998865
No 483
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=57.53 E-value=6.6 Score=33.26 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=21.7
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+..+|++.+|..||++.++++.
T Consensus 375 ~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 375 KALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhCC
Confidence 35567779999999999999998753
No 484
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=57.23 E-value=5.7 Score=32.69 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=20.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
+..+..+|++.+|..||++.++++
T Consensus 263 ~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 263 AKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 456677999999999999999875
No 485
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=57.20 E-value=4.3 Score=33.24 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=21.7
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 288 ~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 288 ALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhCC
Confidence 5577889999999999999988764
No 486
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=57.00 E-value=3.8 Score=33.09 Aligned_cols=25 Identities=24% Similarity=0.206 Sum_probs=21.1
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVI 68 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~ 68 (251)
.+..+..+|++.+|..||++.++++
T Consensus 269 ~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 269 NLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHCCCCcccCCCHHHHhC
Confidence 3566777999999999999988865
No 487
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=56.92 E-value=46 Score=28.45 Aligned_cols=44 Identities=9% Similarity=-0.071 Sum_probs=28.5
Q ss_pred HHHHHHHHHh-----hCCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 200 ALGDAMQAQV-----VSPDWPTALYLQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 200 A~~~~~~al~-----~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
++..|++||. ....+.--|..+|..++..++|.+|+..+..|-.
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 3444555444 3445566677777788888888888877776643
No 488
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=56.81 E-value=10 Score=24.06 Aligned_cols=25 Identities=16% Similarity=-0.076 Sum_probs=14.8
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHh
Q 025537 219 YLQAACLFSLGMENDARETLKDGTN 243 (251)
Q Consensus 219 ~~~g~~~~~~~~~~~A~~~~~~al~ 243 (251)
..+|.=|..+|+|+.|+.+|+-+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3445555666666666666666554
No 489
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=56.53 E-value=5.9 Score=32.86 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=21.6
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+...|++.+|..||++.++++.
T Consensus 299 ~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 299 QAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 35567779999999999999988754
No 490
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=56.34 E-value=5.4 Score=31.81 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||+..+++..
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 238 AKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 5566779999999999999998753
No 491
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=55.96 E-value=4.6 Score=33.41 Aligned_cols=25 Identities=24% Similarity=0.324 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 237 ~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 237 SILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHHHHcccCHhHCcCHHHHhcC
Confidence 4456779999999999999998764
No 492
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=55.77 E-value=49 Score=31.99 Aligned_cols=66 Identities=12% Similarity=-0.136 Sum_probs=54.0
Q ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhcCCH-HHHHHHHHHHHhh
Q 025537 145 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMP-QEALGDAMQAQVV 210 (251)
Q Consensus 145 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~al~~ 210 (251)
+...|.-.-+.+.+.|++++|...|.+-.+..-..+...|+.+-.++.+.|+. ++|...+++-...
T Consensus 164 dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 164 TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 35677888888999999999999999987654223788999999999999984 7888888887664
No 493
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=55.53 E-value=15 Score=25.32 Aligned_cols=25 Identities=20% Similarity=-0.065 Sum_probs=12.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHh
Q 025537 185 ARRCLSYLMNDMPQEALGDAMQAQV 209 (251)
Q Consensus 185 ~~~a~~~~~~~~~~~A~~~~~~al~ 209 (251)
..+|.-.-..|+|++|+..|..|++
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3344434444555555555555543
No 494
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=55.42 E-value=2.7 Score=33.43 Aligned_cols=25 Identities=24% Similarity=0.420 Sum_probs=21.2
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 242 ~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 242 AASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHcccChhhCcCHHHHhhC
Confidence 4556779999999999999998764
No 495
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=55.38 E-value=5.9 Score=32.78 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=21.3
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHccCChhHCcCHHHHHhC
Confidence 4567779999999999999998764
No 496
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=54.78 E-value=6.6 Score=32.16 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=21.3
Q ss_pred HHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 44 ELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 44 ~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
.+..+..+|+..+|..||++.+++..
T Consensus 281 ~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 281 QAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 35566779999999999999988753
No 497
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=54.33 E-value=88 Score=25.57 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=55.7
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHccCC----CCC---HHH--HHHHHHHHH-----hc--CCHH-HHHHHHHHHH---
Q 025537 149 SKKHGDTAFRAKDFSTAIDCYTQFIDGGT----MVS---PTV--YARRCLSYL-----MN--DMPQ-EALGDAMQAQ--- 208 (251)
Q Consensus 149 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p----~~~---~~~--~~~~a~~~~-----~~--~~~~-~A~~~~~~al--- 208 (251)
-.+.|-.++..|+|.+|+..|..+|..-| +.. .++ +...+.-|. .+ .+.. ...++.++.+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 35779999999999999999999886543 101 111 111111111 11 1100 0011222222
Q ss_pred ------hhCCCChHHHHHHH-HHHHhCCCHHHHHHHHHHHHhhhhh
Q 025537 209 ------VVSPDWPTALYLQA-ACLFSLGMENDARETLKDGTNLEAK 247 (251)
Q Consensus 209 ------~~~p~~~~~~~~~g-~~~~~~~~~~~A~~~~~~al~l~P~ 247 (251)
++.|.+-..-.+.| ...++.++|.-|....++.|++.|+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 23444433333333 3468889999999999999999874
No 498
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=53.97 E-value=74 Score=24.59 Aligned_cols=65 Identities=5% Similarity=-0.043 Sum_probs=42.6
Q ss_pred HHHHHHHHhHH-----HhhcCHHHHHHHHHHHHcc-----CCC--CCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhh
Q 025537 146 TLNSKKHGDTA-----FRAKDFSTAIDCYTQFIDG-----GTM--VSPTVYARRCLSYL-MNDMPQEALGDAMQAQVV 210 (251)
Q Consensus 146 a~~~~~~g~~~-----~~~~~~~~A~~~~~~al~~-----~p~--~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~ 210 (251)
+-.++.+|.-+ |..|+-+.|...|+.|.++ .|. ....+-.|.+..|+ -+++.++|...+++|+..
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 33445555443 4566678899999998854 332 02244555666666 478899999999999763
No 499
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=52.76 E-value=5.4 Score=32.78 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=21.0
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 45 LVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 45 ~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
+..+..+|++.+|..||++.++++.
T Consensus 235 ~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 235 AQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHcCCChhHCcCHHHHHhC
Confidence 4556779999999999999998754
No 500
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=52.50 E-value=7.3 Score=32.26 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=22.8
Q ss_pred HHHHHHHhcccCcCCCCCCCHHHHHHH
Q 025537 43 TELVRLASRCLQSEARERPNAKSLVIS 69 (251)
Q Consensus 43 ~~~~~va~~C~~~~p~~RP~m~~v~~~ 69 (251)
..+..+..+|+..+|..||++.++++.
T Consensus 293 ~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 293 SQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 346678889999999999999999764
Done!