Query 025538
Match_columns 251
No_of_seqs 126 out of 715
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:52:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 6.1E-93 1.3E-97 661.2 22.9 251 1-251 124-386 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 3.2E-51 6.9E-56 360.3 19.5 224 1-250 19-261 (263)
3 cd01842 SGNH_hydrolase_like_5 98.1 9.6E-06 2.1E-10 69.0 8.0 147 1-209 3-152 (183)
4 cd01841 NnaC_like NnaC (CMP-Ne 79.3 9 0.0002 31.0 7.1 71 118-209 70-140 (174)
5 cd01827 sialate_O-acetylestera 65.3 42 0.00092 27.3 8.0 82 118-220 88-174 (188)
6 cd01825 SGNH_hydrolase_peri1 S 58.0 62 0.0014 26.1 7.7 73 118-210 76-148 (189)
7 cd00229 SGNH_hydrolase SGNH_hy 43.9 1.4E+02 0.0031 22.6 8.8 97 78-212 62-160 (187)
8 PF06462 Hyd_WA: Propeller; I 42.4 25 0.00054 21.3 2.2 22 139-160 8-30 (32)
9 COG2845 Uncharacterized protei 42.4 55 0.0012 30.8 5.3 21 1-21 120-140 (354)
10 cd01838 Isoamyl_acetate_hydrol 42.1 51 0.0011 26.7 4.8 58 80-152 62-119 (199)
11 PF13472 Lipase_GDSL_2: GDSL-l 35.9 91 0.002 24.1 5.2 115 78-234 58-172 (179)
12 PRK03670 competence damage-ind 35.2 24 0.00052 31.7 1.8 22 228-249 150-171 (252)
13 cd00885 cinA Competence-damage 32.4 28 0.00062 29.1 1.7 21 228-248 141-161 (170)
14 cd01829 SGNH_hydrolase_peri2 S 29.1 25 0.00054 29.1 0.8 95 81-209 59-153 (200)
15 PHA03298 envelope glycoprotein 26.5 33 0.00072 28.0 1.1 18 4-21 38-60 (167)
16 cd01836 FeeA_FeeB_like SGNH_hy 23.6 1.6E+02 0.0034 24.0 4.7 51 81-151 67-117 (191)
17 cd01820 PAF_acetylesterase_lik 22.4 4.6E+02 0.01 21.9 7.9 33 118-152 108-140 (214)
18 PF12026 DUF3513: Domain of un 22.1 11 0.00025 33.0 -2.6 10 1-10 138-147 (210)
19 cd01831 Endoglucanase_E_like E 21.9 36 0.00077 27.6 0.4 24 186-209 117-141 (169)
20 PF09363 XFP_C: XFP C-terminal 21.0 98 0.0021 27.1 3.0 22 197-218 63-85 (203)
21 cd01832 SGNH_hydrolase_like_1 20.7 36 0.00078 27.6 0.2 70 118-210 87-156 (185)
22 COG0180 TrpS Tryptophanyl-tRNA 20.0 1E+02 0.0022 28.8 3.0 37 119-155 59-96 (314)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=6.1e-93 Score=661.24 Aligned_cols=251 Identities=49% Similarity=0.961 Sum_probs=230.4
Q ss_pred CeeeccCChhHHHHHHHhhcccccCceeeeeecCceEEEEEeeCcEEEEEEeecceeeeeecccceeEEeccccc-CCCc
Q 025538 1 MFVGDSLSRNQWQSLTCMLHSSVPYAKYNLTRVDDVSIFTFTDYRVKVMLDRNVYLVDTVRERIGRVLKLDSIQG-GKLW 79 (251)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~Tv~~~wspfLV~~~~~~~~~~l~lD~~~~-~~~w 79 (251)
|||||||+|||||||+|||++++|+.++....+++.++|+|++|||||+||||||||+.+..+..++|+||++++ ++.|
T Consensus 124 ~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w 203 (387)
T PLN02629 124 MFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAW 203 (387)
T ss_pred EEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhh
Confidence 799999999999999999999998766555567788999999999999999999999998776667999999997 6899
Q ss_pred ccccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCc
Q 025538 80 KGIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWH 159 (251)
Q Consensus 80 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~ 159 (251)
.++|||||||||||.+++..++|+|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||
T Consensus 204 ~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn 283 (387)
T PLN02629 204 RDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWS 283 (387)
T ss_pred ccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcC
Confidence 99999999999999999988899999999998999999999999999999999999998999999999999999999999
Q ss_pred cccc---ccccccccccCCCCCCCCCChHHHHHHHHHHhcCCceEEeecccccccccCCCCCccCCCC--------CCCC
Q 025538 160 EPSA---KSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIKKPVKLLDITNLSLLRKDGHPSIYGLGG--------PTGM 228 (251)
Q Consensus 160 ~gG~---g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~--------~~~~ 228 (251)
+||. |+|+++|+|+.++++.++...+++++++++++++.+|+|||||+||++|||||||+|+... ..++
T Consensus 284 ~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~ 363 (387)
T PLN02629 284 AGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSA 363 (387)
T ss_pred CCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCC
Confidence 9862 6899999999977777777777889999999999999999999999999999999996431 2478
Q ss_pred CccccccCCchhHHHHHHHHhhC
Q 025538 229 DCSHWCLAGVPDTWNEILYNMIL 251 (251)
Q Consensus 229 DC~HWClPGv~D~WNelL~~~L~ 251 (251)
||+||||||||||||||||++|+
T Consensus 364 DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 364 DCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred CcccccCCCCCccHHHHHHHHHh
Confidence 99999999999999999999985
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=3.2e-51 Score=360.25 Aligned_cols=224 Identities=38% Similarity=0.684 Sum_probs=177.1
Q ss_pred CeeeccCChhHHHHHHHhhccccc-----CceeeeeecCceEEEEEeeCcEEEEEEeecceeeeeecccceeEEeccccc
Q 025538 1 MFVGDSLSRNQWQSLTCMLHSSVP-----YAKYNLTRVDDVSIFTFTDYRVKVMLDRNVYLVDTVRERIGRVLKLDSIQG 75 (251)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~Tv~~~wspfLV~~~~~~~~~~l~lD~~~~ 75 (251)
+|||||++|||++||+|+|.+..+ +.........+...+.|+++|+||+|+|+|||++. +|.+++
T Consensus 19 ~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~~~----------l~~~~~ 88 (263)
T PF13839_consen 19 VFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLVDQ----------LDSIDE 88 (263)
T ss_pred EEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccccc----------ccccch
Confidence 699999999999999999998766 22222222346678999999999999999999986 555542
Q ss_pred --CCCcc----cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCc--ceEEEEe
Q 025538 76 --GKLWK----GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSK--SMVFFQG 147 (251)
Q Consensus 76 --~~~w~----~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~--~~vf~Rt 147 (251)
...|. ..||||||+|+||.+.+....+ ++. .++...++|+.+++++++++.+.+++.+ ++||||+
T Consensus 89 ~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~ 161 (263)
T PF13839_consen 89 EIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRT 161 (263)
T ss_pred hhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHHHHHhhhccccccceEEEEe
Confidence 35555 8999999999999987643332 322 4667899999999999999988876665 9999999
Q ss_pred ecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHH---hcCCceEEeec-cccccccc-CCCCCccCC
Q 025538 148 ISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALR---KIKKPVKLLDI-TNLSLLRK-DGHPSIYGL 222 (251)
Q Consensus 148 ~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~---~~~~~v~lLdi-t~ls~~R~-DgHp~~y~~ 222 (251)
++|.||++++|++|| +|. +.. ......++.+.+.+++. ....++++||| |.++.+|+ ||||++|++
T Consensus 162 ~~P~h~~~~~~~~gg--~c~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldi~~~~~~~r~~d~H~~~~~~ 232 (263)
T PF13839_consen 162 TSPVHFEGGDWNSGG--SCN----PPR---REEITNEQIDELNEALREALKKNSRVHLLDIFTMLSSFRPDDAHPGIYRN 232 (263)
T ss_pred cCCccccccccccCC--CcC----ccc---ccCCCHHHHHHHHHHHHHHhhcCCCceeeeecchhhhccccccCcccccC
Confidence 999999999999987 995 111 11112333344444443 35789999999 99999999 999999977
Q ss_pred CCC-CCCCccccccCCchhHHHHHHHHhh
Q 025538 223 GGP-TGMDCSHWCLAGVPDTWNEILYNMI 250 (251)
Q Consensus 223 ~~~-~~~DC~HWClPGv~D~WNelL~~~L 250 (251)
... ..+||+|||+|||+|+||+|||++|
T Consensus 233 ~~~~~~~Dc~Hw~~p~v~d~~~~lL~~~l 261 (263)
T PF13839_consen 233 QWPRQPQDCLHWCLPGVIDTWNELLLNLL 261 (263)
T ss_pred CCCCCCCCCcCcCCCcHHHHHHHHHHHHh
Confidence 644 4799999999999999999999987
No 3
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.14 E-value=9.6e-06 Score=68.98 Aligned_cols=147 Identities=15% Similarity=0.191 Sum_probs=83.7
Q ss_pred CeeeccCChhHHHHHHHhhcccccCceeeeeecCceEEEEEeeCcEEEEEEeecceeeeeecccceeEEecccccCCCcc
Q 025538 1 MFVGDSLSRNQWQSLTCMLHSSVPYAKYNLTRVDDVSIFTFTDYRVKVMLDRNVYLVDTVRERIGRVLKLDSIQGGKLWK 80 (251)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~Tv~~~wspfLV~~~~~~~~~~l~lD~~~~~~~w~ 80 (251)
+|+|||+-|-.+.=|+|||+.. .. . +... .+...+ .+..-|..-++..|
T Consensus 3 ~~lgds~~ravykdlv~l~q~~----~~-l-~~~~---------------------lr~k~e---~~f~~D~ll~gg~~- 51 (183)
T cd01842 3 VILGDSIQRAVYKDLVLLLQKD----SL-L-SSSQ---------------------LKAKGE---LSFENDVLLEGGRL- 51 (183)
T ss_pred EEEccHHHHHHHHHHHHHhcCC----cc-c-cHHH---------------------Hhhhhh---hhhccceeecCCce-
Confidence 5899999999999999999832 10 0 0000 000000 01111222223334
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcc
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHE 160 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~ 160 (251)
||||||+|-|=.. +|.. ...+-|++.|.++..-+.+-+ |.+++++|.|++|-= ++. +
T Consensus 52 --DVIi~Ns~LWDl~--------ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv~-~~~---~ 108 (183)
T cd01842 52 --DLVIMNSCLWDLS--------RYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPVA-EEI---K 108 (183)
T ss_pred --eEEEEecceeccc--------ccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCCC-cCC---c
Confidence 9999999999322 3321 247899999999887665544 567899999999972 211 1
Q ss_pred cccccccccccccC---CCCCCCCCChHHHHHHHHHHhcCCceEEeeccccc
Q 025538 161 PSAKSCIRQREPVL---GSTYPGGLPPAVGVLKKALRKIKKPVKLLDITNLS 209 (251)
Q Consensus 161 gG~g~C~~~t~P~~---~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls 209 (251)
| | +-.|-- .+.......+.|....+++++ ..+.++|+..-.
T Consensus 109 g----g--fl~~~~~~~~~~lr~dv~eaN~~A~~va~~--~~~dVlDLh~~f 152 (183)
T cd01842 109 G----G--FLLPELHDLSKSLRYDVLEGNFYSATLAKC--YGFDVLDLHYHF 152 (183)
T ss_pred C----c--eeccccccccccchhHHHHHHHHHHHHHHH--cCceeeehHHHH
Confidence 1 1 222211 011111122344445555544 479999999887
No 4
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=79.33 E-value=9 Score=31.03 Aligned_cols=71 Identities=8% Similarity=0.110 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK 197 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (251)
.+.|++.++++++.+.+. ..++.|++-+..|...+. .+ . ..........+++++++.++.
T Consensus 70 ~~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~~~~~---------~~-------~-~~~~~~~~~~n~~l~~~a~~~- 129 (174)
T cd01841 70 SNQFIKWYRDIIEQIREE--FPNTKIYLLSVLPVLEED---------EI-------K-TRSNTRIQRLNDAIKELAPEL- 129 (174)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCcCccc---------cc-------c-cCCHHHHHHHHHHHHHHHHHC-
Confidence 567788888887776543 235678888887765311 00 0 000001122345555555544
Q ss_pred CceEEeeccccc
Q 025538 198 KPVKLLDITNLS 209 (251)
Q Consensus 198 ~~v~lLdit~ls 209 (251)
.+.++|+..+.
T Consensus 130 -~~~~id~~~~~ 140 (174)
T cd01841 130 -GVTFIDLNDVL 140 (174)
T ss_pred -CCEEEEcHHHH
Confidence 48999998764
No 5
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=65.26 E-value=42 Score=27.31 Aligned_cols=82 Identities=21% Similarity=0.148 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK 197 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (251)
.+.|+..++.+++.+.+. ..++.+++.|..|...... . +..... ......+.++++.++
T Consensus 88 ~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~~~~~~--------~------~~~~~~---~~~~~~~~~~~~a~~-- 146 (188)
T cd01827 88 KDDFKKDYETMIDSFQAL--PSKPKIYICYPIPAYYGDG--------G------FINDNI---IKKEIQPMIDKIAKK-- 146 (188)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCcccccCC--------C------ccchHH---HHHHHHHHHHHHHHH--
Confidence 467888888887776543 2356788888776543111 1 110000 001123445555544
Q ss_pred CceEEeecccccc----cccCC-CCCcc
Q 025538 198 KPVKLLDITNLSL----LRKDG-HPSIY 220 (251)
Q Consensus 198 ~~v~lLdit~ls~----~R~Dg-Hp~~y 220 (251)
..+.++|+...+. +-+|+ ||+..
T Consensus 147 ~~~~~vD~~~~~~~~~~~~~Dg~Hpn~~ 174 (188)
T cd01827 147 LNLKLIDLHTPLKGKPELVPDWVHPNEK 174 (188)
T ss_pred cCCcEEEccccccCCccccCCCCCcCHH
Confidence 4688889876653 33588 88764
No 6
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=57.97 E-value=62 Score=26.14 Aligned_cols=73 Identities=10% Similarity=0.147 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK 197 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (251)
.+.|+..++.+++.+.+. ..+..|++.+..|.-+... .|..+. .......++.++++.++.
T Consensus 76 ~~~~~~~~~~li~~i~~~--~~~~~iv~~~~~~~~~~~~--------~~~~~~--------~~~~~~~~~~~~~~a~~~- 136 (189)
T cd01825 76 ASEYRQQLREFIKRLRQI--LPNASILLVGPPDSLQKTG--------AGRWRT--------PPGLDAVIAAQRRVAKEE- 136 (189)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEcCCchhccCC--------CCCccc--------CCcHHHHHHHHHHHHHHc-
Confidence 567888888888877543 2467788888766432110 111010 111223345556666654
Q ss_pred CceEEeecccccc
Q 025538 198 KPVKLLDITNLSL 210 (251)
Q Consensus 198 ~~v~lLdit~ls~ 210 (251)
.+.++|+...+.
T Consensus 137 -~v~~vd~~~~~~ 148 (189)
T cd01825 137 -GIAFWDLYAAMG 148 (189)
T ss_pred -CCeEEeHHHHhC
Confidence 499999987754
No 7
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=43.94 E-value=1.4e+02 Score=22.64 Aligned_cols=97 Identities=18% Similarity=0.078 Sum_probs=50.4
Q ss_pred CcccccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCC
Q 025538 78 LWKGIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTE 157 (251)
Q Consensus 78 ~w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~ 157 (251)
.....|++|+..|..-..... ....+.+...++..++.+.+. .....+++-+..|...
T Consensus 62 ~~~~~d~vil~~G~ND~~~~~----------------~~~~~~~~~~~~~~i~~~~~~--~~~~~vv~~~~~~~~~---- 119 (187)
T cd00229 62 LKDKPDLVIIELGTNDLGRGG----------------DTSIDEFKANLEELLDALRER--APGAKVILITPPPPPP---- 119 (187)
T ss_pred ccCCCCEEEEEeccccccccc----------------ccCHHHHHHHHHHHHHHHHHH--CCCCcEEEEeCCCCCC----
Confidence 345689999999988543210 112445666666666655431 2445566666554332
Q ss_pred CcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC--CceEEeecccccccc
Q 025538 158 WHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK--KPVKLLDITNLSLLR 212 (251)
Q Consensus 158 W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~--~~v~lLdit~ls~~R 212 (251)
+. . . ........++.++++.+..+ ..+.++|+.......
T Consensus 120 --------~~-~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 160 (187)
T cd00229 120 --------RE-G----L---LGRALPRYNEAIKAVAAENPAPSGVDLVDLAALLGDE 160 (187)
T ss_pred --------Cc-h----h---hHHHHHHHHHHHHHHHHHcCCCcceEEEEhhhhhCCC
Confidence 10 0 0 00001122344455554443 258999999876544
No 8
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=42.45 E-value=25 Score=21.26 Aligned_cols=22 Identities=45% Similarity=0.862 Sum_probs=18.2
Q ss_pred CcceEEEEe-ecCCCCCCCCCcc
Q 025538 139 SKSMVFFQG-ISPSHYNGTEWHE 160 (251)
Q Consensus 139 ~~~~vf~Rt-~SP~Hf~~g~W~~ 160 (251)
..+.+|+|+ .||...+|-.|..
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~~ 30 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWEH 30 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcEE
Confidence 457899998 9999999888853
No 9
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.38 E-value=55 Score=30.77 Aligned_cols=21 Identities=33% Similarity=0.420 Sum_probs=18.1
Q ss_pred CeeeccCChhHHHHHHHhhcc
Q 025538 1 MFVGDSLSRNQWQSLTCMLHS 21 (251)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~ 21 (251)
.||||||++-.-+-|.-.|.+
T Consensus 120 LvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 120 LVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred EEechHHhhhhHHHHHHHhcc
Confidence 489999999999999888864
No 10
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=42.14 E-value=51 Score=26.72 Aligned_cols=58 Identities=10% Similarity=0.031 Sum_probs=35.1
Q ss_pred ccccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 025538 80 KGIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSH 152 (251)
Q Consensus 80 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~H 152 (251)
...|++|+..|.==... .+.. ... ..+.|+..++.+++.+.+.. ..+.+++-|..|..
T Consensus 62 ~~pd~vii~~G~ND~~~----------~~~~--~~~-~~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~ 119 (199)
T cd01838 62 AQPDLVTIFFGANDAAL----------PGQP--QHV-PLDEYKENLRKIVSHLKSLS--PKTKVILITPPPVD 119 (199)
T ss_pred CCceEEEEEecCccccC----------CCCC--Ccc-cHHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCC
Confidence 37899999888641110 0000 011 25788888888887765431 35678888877643
No 11
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=35.91 E-value=91 Score=24.14 Aligned_cols=115 Identities=10% Similarity=-0.020 Sum_probs=59.7
Q ss_pred CcccccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCC
Q 025538 78 LWKGIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTE 157 (251)
Q Consensus 78 ~w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~ 157 (251)
.-...|+|||+.|.==. . .++. .....+.|+.+|+.+++.+.. .+.+++-+..|.......
T Consensus 58 ~~~~~d~vvi~~G~ND~----------~-~~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~ 118 (179)
T PF13472_consen 58 KDPKPDLVVISFGTNDV----------L-NGDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRD 118 (179)
T ss_dssp CGTTCSEEEEE--HHHH----------C-TCTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTT
T ss_pred ccCCCCEEEEEcccccc----------c-cccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCccccccc
Confidence 34567999999885211 1 1100 112466788888887776532 237888888877764432
Q ss_pred CcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcCCceEEeecccccccccCCCCCccCCCCCCCCCccccc
Q 025538 158 WHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIKKPVKLLDITNLSLLRKDGHPSIYGLGGPTGMDCSHWC 234 (251)
Q Consensus 158 W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~~~~~DC~HWC 234 (251)
+ + . ..........++++++++++. .+.++|+.....- +.... .+....|.+|..
T Consensus 119 ~-------~-------~-~~~~~~~~~~~~~~~~~a~~~--~~~~id~~~~~~~----~~~~~--~~~~~~D~~Hp~ 172 (179)
T PF13472_consen 119 P-------K-------Q-DYLNRRIDRYNQAIRELAKKY--GVPFIDLFDAFDD----HDGWF--PKYYFSDGVHPN 172 (179)
T ss_dssp T-------H-------T-TCHHHHHHHHHHHHHHHHHHC--TEEEEEHHHHHBT----TTSCB--HTCTBTTSSSBB
T ss_pred c-------c-------c-hhhhhhHHHHHHHHHHHHHHc--CCEEEECHHHHcc----ccccc--hhhcCCCCCCcC
Confidence 2 1 0 000000112345556665543 8999999999552 21111 011247888864
No 12
>PRK03670 competence damage-inducible protein A; Provisional
Probab=35.20 E-value=24 Score=31.66 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=18.7
Q ss_pred CCccccccCCchhHHHHHHHHh
Q 025538 228 MDCSHWCLAGVPDTWNEILYNM 249 (251)
Q Consensus 228 ~DC~HWClPGv~D~WNelL~~~ 249 (251)
..|.++||||||-....||-..
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~ 171 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKE 171 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHH
Confidence 4689999999999999888653
No 13
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=32.41 E-value=28 Score=29.13 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=17.7
Q ss_pred CCccccccCCchhHHHHHHHH
Q 025538 228 MDCSHWCLAGVPDTWNEILYN 248 (251)
Q Consensus 228 ~DC~HWClPGv~D~WNelL~~ 248 (251)
++|..+||||||..-..||-+
T Consensus 141 ~~~~i~~lPG~P~e~~~m~~~ 161 (170)
T cd00885 141 NGKNVFLLPGVPSEMKPMLEE 161 (170)
T ss_pred CCeEEEEECCChHHHHHHHHH
Confidence 579999999999988777764
No 14
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.14 E-value=25 Score=29.05 Aligned_cols=95 Identities=7% Similarity=0.005 Sum_probs=52.3
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcc
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHE 160 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~ 160 (251)
..|++|++.|..=..... ....+.. ...-.+.+.|+..++.+.+.+.+ ...+|++-+..|.+..
T Consensus 59 ~pd~vii~~G~ND~~~~~-~~~~~~~-----~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~------ 122 (200)
T cd01829 59 KPDVVVVFLGANDRQDIR-DGDGYLK-----FGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSP------ 122 (200)
T ss_pred CCCEEEEEecCCCCcccc-CCCceee-----cCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCCh------
Confidence 469999999987432110 0000000 00112457888888877776542 3567888887775421
Q ss_pred cccccccccccccCCCCCCCCCChHHHHHHHHHHhcCCceEEeeccccc
Q 025538 161 PSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIKKPVKLLDITNLS 209 (251)
Q Consensus 161 gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls 209 (251)
.+. ......++++++++++. .+.++|++.+.
T Consensus 123 ----~~~------------~~~~~~~~~~~~~a~~~--~~~~id~~~~~ 153 (200)
T cd01829 123 ----KLS------------ADMVYLNSLYREEVAKA--GGEFVDVWDGF 153 (200)
T ss_pred ----hHh------------HHHHHHHHHHHHHHHHc--CCEEEEhhHhh
Confidence 111 00112345556665554 58999998775
No 15
>PHA03298 envelope glycoprotein L; Provisional
Probab=26.54 E-value=33 Score=28.05 Aligned_cols=18 Identities=39% Similarity=0.566 Sum_probs=15.8
Q ss_pred eccCCh-----hHHHHHHHhhcc
Q 025538 4 GDSLSR-----NQWQSLTCMLHS 21 (251)
Q Consensus 4 GDSl~R-----Nq~eSLlClL~~ 21 (251)
-||++| .|..||-||-+-
T Consensus 38 ~dsigrlidgaeqlvsmrcmtsf 60 (167)
T PHA03298 38 CDSIGRLIDGAEQLVSMRCMTSF 60 (167)
T ss_pred ccccccccccHHHHhhhhhhccc
Confidence 489999 899999999863
No 16
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=23.62 E-value=1.6e+02 Score=23.98 Aligned_cols=51 Identities=12% Similarity=0.088 Sum_probs=31.7
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPS 151 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~ 151 (251)
..|++||+.|-== ... + ...+.|++.++.+++.+.+.. ..+.||+-+..|-
T Consensus 67 ~pd~Vii~~G~ND----------~~~-~-------~~~~~~~~~l~~li~~i~~~~--~~~~iiv~~~p~~ 117 (191)
T cd01836 67 RFDVAVISIGVND----------VTH-L-------TSIARWRKQLAELVDALRAKF--PGARVVVTAVPPL 117 (191)
T ss_pred CCCEEEEEecccC----------cCC-C-------CCHHHHHHHHHHHHHHHHhhC--CCCEEEEECCCCc
Confidence 5699999877420 110 0 124678888888887775532 3567888776554
No 17
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=22.39 E-value=4.6e+02 Score=21.87 Aligned_cols=33 Identities=6% Similarity=0.189 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSH 152 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~H 152 (251)
.+.|...++.+++.+.+.. ..+.+++-+..|..
T Consensus 108 ~~~~~~~l~~ii~~l~~~~--P~~~Iil~~~~p~~ 140 (214)
T cd01820 108 AEEIAEGILAIVEEIREKL--PNAKILLLGLLPRG 140 (214)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEeccCCC
Confidence 4566777777777665432 34567777776643
No 18
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=22.14 E-value=11 Score=33.00 Aligned_cols=10 Identities=50% Similarity=1.139 Sum_probs=7.2
Q ss_pred CeeeccCChh
Q 025538 1 MFVGDSLSRN 10 (251)
Q Consensus 1 ~FVGDSl~RN 10 (251)
+||||+|+|+
T Consensus 138 VfiGDTl~r~ 147 (210)
T PF12026_consen 138 VFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHC
T ss_pred eeeccHHHHH
Confidence 4778888775
No 19
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=21.94 E-value=36 Score=27.57 Aligned_cols=24 Identities=17% Similarity=0.311 Sum_probs=14.8
Q ss_pred HHHHHHHHHhc-CCceEEeeccccc
Q 025538 186 VGVLKKALRKI-KKPVKLLDITNLS 209 (251)
Q Consensus 186 ~~~v~~~~~~~-~~~v~lLdit~ls 209 (251)
.+.+++++++. ..++.++|.....
T Consensus 117 ~~~~~~~~~~~~~~~v~~id~~~~~ 141 (169)
T cd01831 117 IKRVAEAFKDQKSKKVHYFDTPGIL 141 (169)
T ss_pred HHHHHHHHHhcCCceEEEEeccccc
Confidence 34555555543 2579999987643
No 20
>PF09363 XFP_C: XFP C-terminal domain; InterPro: IPR018969 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria. PK activity has been sporadically reported in other microorganisms including eukaryotic yeasts. Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase is a thiamine diphosphate (ThdP)-dependent enzyme found in bacteria such as Bifidobacterium sp [, ]. This enzyme has dual-specificity with the following catalytic activities: 4.1.2.9 from EC: xylose 5-P + Pi = acetyl-P + glyeraldehyde-3-P 4.1.2.22 from EC: fructose-6-P + Pi = acetyl-P + erythrose-4-P Phosphoketolases are distantly related to transketolases, e.g. IPR005475 from INTERPRO.; GO: 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3AI7_B 3AHC_A 3AHJ_A 3AHG_A 3AHE_A 3AHI_A 3AHD_A 3AHF_A 3AHH_A.
Probab=20.95 E-value=98 Score=27.08 Aligned_cols=22 Identities=18% Similarity=0.514 Sum_probs=15.6
Q ss_pred CCceEEeeccccccccc-CCCCC
Q 025538 197 KKPVKLLDITNLSLLRK-DGHPS 218 (251)
Q Consensus 197 ~~~v~lLdit~ls~~R~-DgHp~ 218 (251)
..||+++||+.|+.|++ +.||-
T Consensus 63 ~lkiRvVNVvDLm~L~~~~~hPh 85 (203)
T PF09363_consen 63 ELKIRVVNVVDLMKLQPPSEHPH 85 (203)
T ss_dssp T--EEEEEESBGGGGS-TTT-TT
T ss_pred CceEEEEEEeEccccCCCCCCCC
Confidence 67999999999999975 66775
No 21
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=20.65 E-value=36 Score=27.60 Aligned_cols=70 Identities=11% Similarity=0.032 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK 197 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (251)
.+.|+..++.+++.+. .+.+.|++-|..|. . . ..|+.... .......++.++++.++
T Consensus 87 ~~~~~~~~~~~i~~i~----~~~~~vil~~~~~~-~---~------------~~~~~~~~-~~~~~~~n~~l~~~a~~-- 143 (185)
T cd01832 87 PDTYRADLEEAVRRLR----AAGARVVVFTIPDP-A---V------------LEPFRRRV-RARLAAYNAVIRAVAAR-- 143 (185)
T ss_pred HHHHHHHHHHHHHHHH----hCCCEEEEecCCCc-c---c------------cchhHHHH-HHHHHHHHHHHHHHHHH--
Confidence 5678888888877764 23456777775544 0 0 01111000 00011223455555554
Q ss_pred CceEEeecccccc
Q 025538 198 KPVKLLDITNLSL 210 (251)
Q Consensus 198 ~~v~lLdit~ls~ 210 (251)
..+.++|+..+..
T Consensus 144 ~~v~~vd~~~~~~ 156 (185)
T cd01832 144 YGAVHVDLWEHPE 156 (185)
T ss_pred cCCEEEecccCcc
Confidence 4699999988764
No 22
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=20.04 E-value=1e+02 Score=28.77 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=31.0
Q ss_pred HHHHHHHH-HHHHHHHhhcCCCcceEEEEeecCCCCCC
Q 025538 119 IAFEKALT-TWGHWVDANINTSKSMVFFQGISPSHYNG 155 (251)
Q Consensus 119 ~a~~~al~-t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~ 155 (251)
+..+.+.+ .++.||.--+||.|+.+|+.|--|.|.|-
T Consensus 59 ~~l~~~~~e~~a~~LA~GiDP~k~~if~QS~v~e~~eL 96 (314)
T COG0180 59 EDLRQATREVAADYLAVGLDPEKSTIFLQSEVPEHAEL 96 (314)
T ss_pred HHHHHHHHHHHHHHHHhccCccccEEEEccCchHHHHH
Confidence 66677654 67888888899999999999999999863
Done!