Query 025538
Match_columns 251
No_of_seqs 126 out of 715
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:22:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 72.8 7.2 0.00024 30.9 6.1 91 81-210 74-164 (200)
2 3dc7_A Putative uncharacterize 51.7 39 0.0013 27.0 6.9 25 185-211 162-186 (232)
3 1fll_X B-cell surface antigen 46.2 6.9 0.00024 21.9 0.9 11 227-237 6-16 (26)
4 3dci_A Arylesterase; SGNH_hydr 43.0 1E+02 0.0034 24.7 8.1 85 118-219 122-212 (232)
5 2lul_A Tyrosine-protein kinase 34.0 36 0.0012 26.7 3.8 32 125-158 109-140 (164)
6 1yzf_A Lipase/acylhydrolase; s 31.9 60 0.0021 24.6 4.8 50 80-151 66-115 (195)
7 3hp4_A GDSL-esterase; psychrot 26.5 22 0.00075 27.3 1.2 46 81-148 66-111 (185)
8 2yvc_D Neprilysin; protein-pep 26.3 17 0.00058 20.0 0.3 13 202-214 6-18 (26)
9 4hf7_A Putative acylhydrolase; 24.8 12 0.0004 30.2 -0.8 31 118-152 100-130 (209)
10 1oeg_A Apolipoprotein E; siali 24.6 29 0.00099 19.5 1.1 16 8-23 6-21 (26)
11 3p94_A GDSL-like lipase; serin 23.1 2E+02 0.0069 21.8 6.4 71 118-210 96-166 (204)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=72.80 E-value=7.2 Score=30.88 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=52.0
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcc
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHE 160 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~ 160 (251)
..|++||+.|..=.. ...+.|+..|+.+++.+.+. ..++.+++-+..|..... +.
T Consensus 74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~~- 128 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--GM- 128 (200)
T ss_dssp CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--GG-
T ss_pred CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--cc-
Confidence 469999999864100 12567888888888877554 245678888888754311 00
Q ss_pred cccccccccccccCCCCCCCCCChHHHHHHHHHHhcCCceEEeecccccc
Q 025538 161 PSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIKKPVKLLDITNLSL 210 (251)
Q Consensus 161 gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdit~ls~ 210 (251)
... .+.. ......++++++++++. .+.++|+...+.
T Consensus 129 ----~~~---~~~~-----~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~ 164 (200)
T 4h08_A 129 ----KEF---APIT-----ERLNVRNQIALKHINRA--SIEVNDLWKVVI 164 (200)
T ss_dssp ----CEE---CTHH-----HHHHHHHHHHHHHHHHT--TCEEECHHHHHT
T ss_pred ----ccc---chhH-----HHHHHHHHHHHHHhhhc--ceEEEecHHhHh
Confidence 010 0000 00112245556655553 688999887664
No 2
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=51.73 E-value=39 Score=27.01 Aligned_cols=25 Identities=8% Similarity=-0.023 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhcCCceEEeeccccccc
Q 025538 185 AVGVLKKALRKIKKPVKLLDITNLSLL 211 (251)
Q Consensus 185 ~~~~v~~~~~~~~~~v~lLdit~ls~~ 211 (251)
.+++++++.++. .+.++|+...+..
T Consensus 162 ~~~~i~~~a~~~--~v~~iD~~~~~~~ 186 (232)
T 3dc7_A 162 YEAAIAQMTADY--GVPHLSLYRDAGM 186 (232)
T ss_dssp HHHHHHHHHHHH--TCCEEEHHHHSSC
T ss_pred HHHHHHHHHHHc--CCcEEecccccCC
Confidence 346666666654 6788999887553
No 3
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=46.20 E-value=6.9 Score=21.89 Aligned_cols=11 Identities=9% Similarity=-0.200 Sum_probs=9.3
Q ss_pred CCCccccccCC
Q 025538 227 GMDCSHWCLAG 237 (251)
Q Consensus 227 ~~DC~HWClPG 237 (251)
.+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 47999999994
No 4
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=43.03 E-value=1e+02 Score=24.71 Aligned_cols=85 Identities=12% Similarity=0.035 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCC---CcceEEEEeecCCCCCCC-CCcccccccccccccccCCCCCCCCCChHHHHHHHHH
Q 025538 118 MIAFEKALTTWGHWVDANINT---SKSMVFFQGISPSHYNGT-EWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKAL 193 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~---~~~~vf~Rt~SP~Hf~~g-~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~ 193 (251)
.+.|+..|+.+++.+.+.... ..+.|++-+..|-....| .|...+ . .......+++++++.
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~a 186 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPGGEPAGGR---D------------IEQSMRLAPLYRKLA 186 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCCCCTTSSCGGGC---C------------HHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcCcccCccccccc---H------------HHHHHHHHHHHHHHH
Confidence 567888888888877554210 356677776444332111 111000 0 000112345666666
Q ss_pred HhcCCceEEeecccccc-cccCC-CCCc
Q 025538 194 RKIKKPVKLLDITNLSL-LRKDG-HPSI 219 (251)
Q Consensus 194 ~~~~~~v~lLdit~ls~-~R~Dg-Hp~~ 219 (251)
++. .+.++|+..... +-+|| ||+.
T Consensus 187 ~~~--~v~~iD~~~~~~~~~~DgvHpn~ 212 (232)
T 3dci_A 187 AEL--GHHFFDAGSVASASPVDGVHLDA 212 (232)
T ss_dssp HHH--TCEEEEGGGTCCCCTTTSSSCCH
T ss_pred HHh--CCeEEcchHhcCcccCCCCCcCH
Confidence 654 577899876543 33444 5543
No 5
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=34.05 E-value=36 Score=26.67 Aligned_cols=32 Identities=9% Similarity=0.328 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCC
Q 025538 125 LTTWGHWVDANINTSKSMVFFQGISPSHYNGTEW 158 (251)
Q Consensus 125 l~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W 158 (251)
++.|++.|.+.+..+..+ ...|=|++|.+|.|
T Consensus 109 ~~~Wi~aL~~~i~~n~~~--~~~yHpg~~~~~~w 140 (164)
T 2lul_A 109 RDLWVKKLKEEIKNNNNI--MIKYHPKFWTDGSY 140 (164)
T ss_dssp HHHHHHHHHHHHTTCSCC--CSEECCSCCCTTCC
T ss_pred HHHHHHHHHHHHHHChhh--hhhcCCCcccCCeE
Confidence 345666665555544432 36799999999999
No 6
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=31.93 E-value=60 Score=24.55 Aligned_cols=50 Identities=12% Similarity=-0.064 Sum_probs=29.9
Q ss_pred ccccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 025538 80 KGIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGISPS 151 (251)
Q Consensus 80 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~ 151 (251)
...|++|+..|.-=. .... . ...+.|+..++.+++.+. ...+++-+..|.
T Consensus 66 ~~pd~vvi~~G~ND~----------~~~~-----~-~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGANDA----------SLDR-----N-ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTTTT----------CTTS-----C-CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred cCCCEEEEEeecccc----------CccC-----C-CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 356999999885211 1000 1 125677888877766552 456777777664
No 7
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=26.54 E-value=22 Score=27.27 Aligned_cols=46 Identities=13% Similarity=0.009 Sum_probs=28.5
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEee
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQGI 148 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~ 148 (251)
..|++|+..|.-= .+. + ...+.|+..++.+++.+.+. ...+++-++
T Consensus 66 ~pd~vvi~~G~ND----------~~~-~-------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGAND----------GLR-G-------FPVKKMQTNLTALVKKSQAA----NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHHH----------HHT-T-------CCHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeeccc----------CCC-C-------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeC
Confidence 4699999988531 000 1 12468888888888877553 345666553
No 8
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=26.25 E-value=17 Score=20.04 Aligned_cols=13 Identities=23% Similarity=0.447 Sum_probs=10.8
Q ss_pred EeecccccccccC
Q 025538 202 LLDITNLSLLRKD 214 (251)
Q Consensus 202 lLdit~ls~~R~D 214 (251)
-||||.++..||-
T Consensus 6 qmditdinapkpk 18 (26)
T 2yvc_D 6 QMDITDINAPKPK 18 (26)
T ss_pred ccccccccCCCcc
Confidence 4899999988874
No 9
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=24.78 E-value=12 Score=30.15 Aligned_cols=31 Identities=13% Similarity=0.090 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSH 152 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~H 152 (251)
.+.+...++++++.+.+ ..+.|++-|..|..
T Consensus 100 ~~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 100 EDYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 44556666666654432 35678898887754
No 10
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=24.62 E-value=29 Score=19.54 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=12.3
Q ss_pred ChhHHHHHHHhhcccc
Q 025538 8 SRNQWQSLTCMLHSSV 23 (251)
Q Consensus 8 ~RNq~eSLlClL~~~~ 23 (251)
-|+||+.|+=-+..++
T Consensus 6 mr~Q~~~lveKvq~a~ 21 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAV 21 (26)
T ss_dssp TTTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3899999998776543
No 11
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.10 E-value=2e+02 Score=21.78 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCcccccccccccccccCCCCCCCCCChHHHHHHHHHHhcC
Q 025538 118 MIAFEKALTTWGHWVDANINTSKSMVFFQGISPSHYNGTEWHEPSAKSCIRQREPVLGSTYPGGLPPAVGVLKKALRKIK 197 (251)
Q Consensus 118 ~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~gG~g~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (251)
.+.|+..++.+++.+.+ ....+++-+..|..-. .|... . .........++.++++.++.
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~~~--~~~~~------------~--~~~~~~~~~n~~l~~~a~~~- 154 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPAYDF--PWRPG------------M--QPADKVIQLNKWIKEYADKN- 154 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCSCB--TTBTT------------C--CCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCCCC--CCCcc------------c--cHHHHHHHHHHHHHHHHHHc-
Confidence 56788888877776644 3557888887665321 12110 0 00000112235555555543
Q ss_pred CceEEeecccccc
Q 025538 198 KPVKLLDITNLSL 210 (251)
Q Consensus 198 ~~v~lLdit~ls~ 210 (251)
.+.++|+.....
T Consensus 155 -~v~~iD~~~~~~ 166 (204)
T 3p94_A 155 -GLTYVDYHSAMK 166 (204)
T ss_dssp -TCEEECHHHHHC
T ss_pred -CCcEEchhhhhh
Confidence 799999987763
Done!