Query 025538
Match_columns 251
No_of_seqs 126 out of 715
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 12:22:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o14a2 c.23.10.8 (A:160-367) 53.4 24 0.0018 25.8 7.8 33 186-220 139-187 (208)
2 d3dc7a1 c.23.10.9 (A:18-224) U 49.7 27 0.002 25.0 7.4 32 187-220 147-190 (207)
3 d1k7ca_ c.23.10.4 (A:) Rhamnog 44.5 42 0.0031 24.4 7.9 37 184-222 150-201 (233)
4 d1vjga_ c.23.10.6 (A:) Hypothe 33.3 3 0.00022 30.5 -0.8 40 81-133 72-111 (201)
5 d3bzwa1 c.23.10.9 (A:38-285) U 27.6 7.2 0.00052 28.3 0.5 28 119-148 123-150 (248)
6 d1dxha2 c.78.1.1 (A:151-335) O 23.0 15 0.0011 27.7 1.6 20 1-21 9-28 (185)
7 d1es9a_ c.23.10.3 (A:) Platele 21.1 7.1 0.00052 29.7 -0.8 30 119-150 107-136 (212)
8 d1btka_ b.55.1.1 (A:) Bruton's 20.7 23 0.0017 25.7 2.3 32 125-158 120-151 (169)
9 d1fxwf_ c.23.10.3 (F:) Platele 20.5 7.5 0.00055 29.6 -0.8 29 120-150 108-136 (212)
10 d1jrla_ c.23.10.5 (A:) Thioest 20.1 11 0.00079 27.3 0.2 45 81-147 62-106 (179)
No 1
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=53.37 E-value=24 Score=25.82 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCCceEEeecccccc---------------cccCC-CCCcc
Q 025538 186 VGVLKKALRKIKKPVKLLDITNLSL---------------LRKDG-HPSIY 220 (251)
Q Consensus 186 ~~~v~~~~~~~~~~v~lLdit~ls~---------------~R~Dg-Hp~~y 220 (251)
++.++++.++. .+.++|+..++. +-+|+ ||+..
T Consensus 139 ~~~~~~~a~~~--~v~~vD~~~~~~~~~~~~~~~~~~~~~~~~DgvHpn~~ 187 (208)
T d2o14a2 139 RASILALAEEE--KTYLIDLNVLSSAYFTSIGPERTLGLYMDGDTLHPNRA 187 (208)
T ss_dssp HHHHHHHHHHT--TCEEECHHHHHHHHHHHHCHHHHHTTBCTTCSSSBBHH
T ss_pred HHHHHHhhccC--CcEEeccHHHHHHHHHHhCccccccccCCCCCCCCCHH
Confidence 45666666654 578899877653 34677 77754
No 2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=49.72 E-value=27 Score=25.01 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCceEEeecccccccc-----------cCC-CCCcc
Q 025538 187 GVLKKALRKIKKPVKLLDITNLSLLR-----------KDG-HPSIY 220 (251)
Q Consensus 187 ~~v~~~~~~~~~~v~lLdit~ls~~R-----------~Dg-Hp~~y 220 (251)
+.++++.++. .+.++|+...+..+ +|+ ||+.-
T Consensus 147 ~~~~~~a~~~--~~~~id~~~~~~~~~~~~~~~~~~~~Dg~Hpn~~ 190 (207)
T d3dc7a1 147 AAIAQMTADY--GVPHLSLYRDAGMTFAIPAQAAIYSVDTLHPNNA 190 (207)
T ss_dssp HHHHHHHHHH--TCCEEEHHHHSSCCTTSHHHHHHHBSSSSSBCHH
T ss_pred HHHHHHHHhc--eeeeeehhhhhhcccccccchhcCCCCCCCCCHH
Confidence 4455555443 67888987655444 466 88754
No 3
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=44.52 E-value=42 Score=24.37 Aligned_cols=37 Identities=22% Similarity=0.094 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHhcCCceEEeeccccc--------------ccccCC-CCCccCC
Q 025538 184 PAVGVLKKALRKIKKPVKLLDITNLS--------------LLRKDG-HPSIYGL 222 (251)
Q Consensus 184 ~~~~~v~~~~~~~~~~v~lLdit~ls--------------~~R~Dg-Hp~~y~~ 222 (251)
...+.+++++++. .+.++|+..++ .+.+|+ ||+..++
T Consensus 150 ~~~~~~~~~a~~~--~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G~ 201 (233)
T d1k7ca_ 150 RFVEYAELAAEVA--GVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGA 201 (233)
T ss_dssp HHHHHHHHHHHHH--TCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHc--CCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHHH
Confidence 3456666666554 68899987655 256798 9997643
No 4
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=33.30 E-value=3 Score=30.45 Aligned_cols=40 Identities=8% Similarity=-0.119 Sum_probs=22.8
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHH
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVD 133 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~ 133 (251)
..|++|++.|.--.. ...+.. ....+.|++.|+..++.+.
T Consensus 72 ~~d~vii~~G~ND~~---------~~~~~~----~~~~~~~~~~l~~~i~~~~ 111 (201)
T d1vjga_ 72 YNSLVVFSFGLNDTT---------LENGKP----RVSIAETIKNTREILTQAK 111 (201)
T ss_dssp SEEEEEEECCHHHHC---------EETTEE----SSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccc---------cccccc----CCCHHHHHHHHHHHHHHhh
Confidence 479999999874221 111111 1235678888877666543
No 5
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=27.63 E-value=7.2 Score=28.27 Aligned_cols=28 Identities=0% Similarity=-0.146 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEee
Q 025538 119 IAFEKALTTWGHWVDANINTSKSMVFFQGI 148 (251)
Q Consensus 119 ~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~ 148 (251)
+.|...++.+.+.+.+. . ....+++-+.
T Consensus 123 ~~~~~~~~~~i~~l~~~-~-~~~~i~~~~~ 150 (248)
T d3bzwa1 123 DTYRGRINIGITQLKKL-F-PDKQIVLLTP 150 (248)
T ss_dssp SSHHHHHHHHHHHHHHH-C-TTSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHh-C-Ccccceeeec
Confidence 45666777666666443 2 3445555544
No 6
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.02 E-value=15 Score=27.69 Aligned_cols=20 Identities=25% Similarity=0.295 Sum_probs=16.8
Q ss_pred CeeeccCChhHHHHHHHhhcc
Q 025538 1 MFVGDSLSRNQWQSLTCMLHS 21 (251)
Q Consensus 1 ~FVGDSl~RNq~eSLlClL~~ 21 (251)
+||||.-+ |-..||+-+++.
T Consensus 9 a~vGD~~n-nV~~Sli~~~~~ 28 (185)
T d1dxha2 9 AYLGDARN-NMGNSLLLIGAK 28 (185)
T ss_dssp EEESCCSS-HHHHHHHHHHHH
T ss_pred EEEcCCcc-hHHHHHHHHHHH
Confidence 59999756 799999999864
No 7
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=21.15 E-value=7.1 Score=29.73 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEeecC
Q 025538 119 IAFEKALTTWGHWVDANINTSKSMVFFQGISP 150 (251)
Q Consensus 119 ~a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP 150 (251)
+-+...++++++.+.+. ...+.|++-+..|
T Consensus 107 ~~~~~~~~~ii~~l~~~--~p~~~Ii~~~~~p 136 (212)
T d1es9a_ 107 EQVTGGIKAIVQLVNER--QPQARVVVLGLLP 136 (212)
T ss_dssp HHHHHHHHHHHHHHHHH--STTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHh--hccccccceeeee
Confidence 34455566666655443 2355677777665
No 8
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.72 E-value=23 Score=25.74 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCC
Q 025538 125 LTTWGHWVDANINTSKSMVFFQGISPSHYNGTEW 158 (251)
Q Consensus 125 l~t~~~~v~~~~~~~~~~vf~Rt~SP~Hf~~g~W 158 (251)
++.|++.|.+.+..+.. ..+.+-|+||.+|-|
T Consensus 120 ~~~WI~aL~~~i~~~~~--~~~~~h~~~~~~~~w 151 (169)
T d1btka_ 120 RKRWIHQLKNVIRYNSD--LVQKYHPCFWIDGQY 151 (169)
T ss_dssp HHHHHHHHHHHHTTCSC--CCSEECSSCEETTEE
T ss_pred HHHHHHHHHHHHHhCcc--cccccCcccccCCEE
Confidence 45566666555554432 356779999999999
No 9
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=20.45 E-value=7.5 Score=29.63 Aligned_cols=29 Identities=7% Similarity=0.250 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEEEEeecC
Q 025538 120 AFEKALTTWGHWVDANINTSKSMVFFQGISP 150 (251)
Q Consensus 120 a~~~al~t~~~~v~~~~~~~~~~vf~Rt~SP 150 (251)
.+...++.+++.+.+.. ..+.+++-+..|
T Consensus 108 ~~~~~~~~~i~~i~~~~--p~~~Ii~~~~~P 136 (212)
T d1fxwf_ 108 EVAGGIEAIVQLINTRQ--PQAKIIVLGLLP 136 (212)
T ss_dssp HHHHHHHHHHHHHHHHC--TTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHh--ccccccceeecc
Confidence 44455666666664432 356788877766
No 10
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=20.13 E-value=11 Score=27.33 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=25.1
Q ss_pred cccEEEEecccccccCCCCCCcceeecCceeccCCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 025538 81 GIDMLIFNTWHWWNRRGPTQPWDFIKIGNKTLKDMDRMIAFEKALTTWGHWVDANINTSKSMVFFQG 147 (251)
Q Consensus 81 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~al~t~~~~v~~~~~~~~~~vf~Rt 147 (251)
..|++|+..|.- .. +. + ...+.+++.++.+++-+.+ ....+++-+
T Consensus 62 ~pd~vii~~G~N---D~-------~~-~-------~~~~~~~~~~~~~i~~~~~----~~~~vil~~ 106 (179)
T d1jrla_ 62 QPRWVLVELGGN---DG-------LR-G-------FQPQQTEQTLRQILQDVKA----ANAEPLLMQ 106 (179)
T ss_dssp CCSEEEEECCTT---TT-------TT-T-------CCHHHHHHHHHHHHHHHHH----TTCEEEEEC
T ss_pred CCcEEEEEEecc---cc-------cc-c-------cchhhhhhhHHHHHHHHHh----ccCcEEEEe
Confidence 359999988862 11 11 1 1255677777766665543 234555544
Done!