BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025540
(251 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1R2R|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
Length = 248
Score = 285 bits (728), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/247 (57%), Positives = 172/247 (69%), Gaps = 2/247 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + ++++ LN + ++ + L P V
Sbjct: 4 RKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+ALS+GL
Sbjct: 62 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL +N S +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+
Sbjct: 182 QEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFV 241
Query: 243 DIIKSAE 249
DII + +
Sbjct: 242 DIINAKQ 248
>pdb|1WYI|A Chain A, Human Triosephosphate Isomerase Of New Crystal Form
pdb|1WYI|B Chain B, Human Triosephosphate Isomerase Of New Crystal Form
pdb|2JK2|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme.
pdb|2JK2|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme
Length = 250
Score = 283 bits (725), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 171/247 (69%), Gaps = 2/247 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 6 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 63
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+AL++GL
Sbjct: 64 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGL 123
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 124 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL +N S +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+
Sbjct: 184 QEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFV 243
Query: 243 DIIKSAE 249
DII + +
Sbjct: 244 DIINAKQ 250
>pdb|1HTI|A Chain A, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
pdb|1HTI|B Chain B, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
Length = 248
Score = 283 bits (724), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 171/247 (69%), Gaps = 2/247 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 4 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL +N S +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+
Sbjct: 182 QEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFV 241
Query: 243 DIIKSAE 249
DII + +
Sbjct: 242 DIINAKQ 248
>pdb|2VOM|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|C Chain C, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|D Chain D, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation
Length = 250
Score = 282 bits (722), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 171/247 (69%), Gaps = 2/247 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 6 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 63
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + + +E +G KVA+AL++GL
Sbjct: 64 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGDSDELIGQKVAHALAEGL 123
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 124 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL +N S +A +TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+
Sbjct: 184 QEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFV 243
Query: 243 DIIKSAE 249
DII + +
Sbjct: 244 DIINAKQ 250
>pdb|2I9E|A Chain A, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|B Chain B, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|C Chain C, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|D Chain D, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
Length = 259
Score = 280 bits (717), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/250 (55%), Positives = 174/250 (69%), Gaps = 2/250 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RKF VGGNWK NG +++ +I+ L G +L LV++ +
Sbjct: 1 MARKFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAI--YLELVRTCVPASI 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
VAAQNC+ GAFTGEIS M+ ++ WVILGHSERR I E +E + +KV +AL
Sbjct: 59 GVAAQNCYKVPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALES 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
GLKVIAC+GETLE+REAG T +VV QTKAIA +V+ WSN+V+AYEPVWAIGTGK ATP
Sbjct: 119 GLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSNVVIAYEPVWAIGTGKTATPQ 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ+VH LR+W+ N ++ + RI YGGSV ANCKELA+QPD+DGFLVGGASLKPE
Sbjct: 179 QAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPE 238
Query: 241 FIDIIKSAEL 250
F+DII + +L
Sbjct: 239 FVDIINARQL 248
>pdb|1SW3|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
pdb|1SW3|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
Length = 248
Score = 280 bits (715), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/245 (57%), Positives = 171/245 (69%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGKVATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKVATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 241
Query: 243 DIIKS 247
DII +
Sbjct: 242 DIINA 246
>pdb|1TPH|1 Chain 1, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|1TPH|2 Chain 2, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|8TIM|A Chain A, Triose Phosphate Isomerase
pdb|8TIM|B Chain B, Triose Phosphate Isomerase
Length = 247
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/245 (57%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1TPB|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPB|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAY+PVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1SPQ|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SPQ|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 276 bits (707), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTKTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1TPW|A Chain A, Triosephosphate Isomerase Drinks Water To Keep Healthy
pdb|1TPW|B Chain B, Triosephosphate Isomerase Drinks Water To Keep Healthy
Length = 247
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGH ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1TPU|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPU|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILG+SERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGNSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1SW7|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
pdb|1SW7|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
Length = 248
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG +TP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNSSTPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 241
Query: 243 DIIKS 247
DII +
Sbjct: 242 DIINA 246
>pdb|1TPC|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPC|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 275 bits (702), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGH ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAY+PVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1SW0|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
pdb|1SW0|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
Length = 248
Score = 273 bits (698), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 241
Query: 243 DIIKS 247
DII +
Sbjct: 242 DIINA 246
>pdb|1SSD|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSD|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 273 bits (698), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGYSLTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1SQ7|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SQ7|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 273 bits (698), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 169/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1SU5|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SU5|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 273 bits (697), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNPNTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL ++ S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1TIM|A Chain A, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
pdb|1TIM|B Chain B, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
Length = 247
Score = 273 bits (697), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ L+ + +L + L V
Sbjct: 3 RKFFVGGNWKMNGKRKSLGELIHTLDGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV +TKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFQETKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +RIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAVQSRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|1TPV|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPV|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILG+ ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGNPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH +LR WL + S +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFV 240
Query: 243 DIIKS 247
DII +
Sbjct: 241 DIINA 245
>pdb|3TH6|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus.
pdb|3TH6|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus
Length = 249
Score = 252 bits (644), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 159/247 (64%), Gaps = 2/247 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+F VGGNWK +G+ ++ I + L +L +S L P +
Sbjct: 4 RRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAP--YLDYCRSLLPPSVAL 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ + GAFTGEIS M+ + WVILGHSERR + E + +G+K+ +AL GL
Sbjct: 62 AAQNCYKVEQGAFTGEISPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE LE REAG T +V Q K IA V WS +V+AYEPVWAIGTGK ATP QA
Sbjct: 122 NVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH ++R WL N S ++A+ RI YGGSVN NCKEL +PD+DGFLVGGASLKPEF+
Sbjct: 182 QEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKPEFV 241
Query: 243 DIIKSAE 249
II + +
Sbjct: 242 QIINAMQ 248
>pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
pdb|1MO0|B Chain B, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
Length = 275
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/247 (52%), Positives = 159/247 (64%), Gaps = 2/247 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
+ RKFFVGGNWK NG V IV+ LN +L KS L+ G
Sbjct: 21 LTRKFFVGGNWKMNGDYASVDGIVTFLN--ASADNSSVDVVVAPPAPYLAYAKSKLKAGV 78
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
VAAQNC+ GAFTGEIS M+ +L + WVILGHSERR + E + + +K +AL
Sbjct: 79 LVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEA 138
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+KV+ C+GE LE+REAG T DV Q +AI D+ SW NIV+AYEPVWAIGTGK A+
Sbjct: 139 GIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGE 198
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQEVH +R +L SP +A ATRIIYGGSV N EL +PD+DGFLVGGASLKP+
Sbjct: 199 QAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPD 258
Query: 241 FIDIIKS 247
F+ II +
Sbjct: 259 FVKIINA 265
>pdb|1QDS|A Chain A, Superstable E65q Mutant Of Leishmania Mexicana
Triosephosphate Isomerase (Tim)
pdb|1IF2|A Chain A, X-Ray Structure Of Leishmania Mexicana Triosephosphate
Isomerase Complexed With Ipp
pdb|1N55|A Chain A, 0.83a Resolution Structure Of The E65q Mutant Of
Leishmania Mexicana Triosephosphate Isomerase Complexed
With 2-Phosphoglycolate
pdb|2VXN|A Chain A, E65q-Tim Complexed With Phosphoglycolohydroxamate At 0.82
A Resolution
pdb|2Y61|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
S-Glycidol Phosphate
pdb|2Y62|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
R-Glycidol Phosphate
pdb|2Y63|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
Bromohydroxyacetone Phosphate
Length = 251
Score = 248 bits (634), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 163/243 (67%), Gaps = 6/243 (2%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQN 66
NWKCNGT ++K+V V NE + LV++ LR P + ++AQN
Sbjct: 10 AANWKCNGTTASIEKLVQVFNE--HTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQN 67
Query: 67 CWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA 126
+ K GAFTGE+S +L ++ + WVILGHSERR E +E V KV+ A QG VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 127 CVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQE 184
C+GETL+QREA T VV +QT AIA +++ +W+ +VLAYEPVWAIGTGKVATP QAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 185 VHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDI 244
VH LRKW+ N ++AA RI+YGGSVN AN L A+PD++GFLVGGASLKPEF DI
Sbjct: 187 VHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPEFRDI 246
Query: 245 IKS 247
I +
Sbjct: 247 IDA 249
>pdb|1AMK|A Chain A, Leishmania Mexicana Triose Phosphate Isomerase
Length = 251
Score = 247 bits (630), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 163/243 (67%), Gaps = 6/243 (2%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQN 66
NWKCNGT ++K+V V NE + LV++ LR P + ++A+N
Sbjct: 10 AANWKCNGTTASIEKLVQVFNE--HTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAEN 67
Query: 67 CWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA 126
+ K GAFTGE+S +L ++ + WVILGHSERR E +E V KV+ A QG VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 127 CVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQE 184
C+GETL+QREA T VV +QT AIA +++ +W+ +VLAYEPVWAIGTGKVATP QAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 185 VHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDI 244
VH LRKW+ N ++AA RI+YGGSVN AN L A+PD++GFLVGGASLKPEF DI
Sbjct: 187 VHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPEFRDI 246
Query: 245 IKS 247
I +
Sbjct: 247 IDA 249
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 159/247 (64%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ WVILGHSERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
AQ++H +RK+L + + A+ RI+YGGS NG+N + DVDGFLVGGASLKPE
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 238
Query: 241 FIDIIKS 247
F+DII S
Sbjct: 239 FVDIINS 245
>pdb|1M6J|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
pdb|1M6J|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
Length = 261
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 162/257 (63%), Gaps = 10/257 (3%)
Query: 4 KFFVGGNWKCNGTPEEVKKIVS-VLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR----- 57
KF VGGNWKCNGT ++ + V ++ V+ L
Sbjct: 5 KFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANG 64
Query: 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYA 117
V+A+N W K GA+TGE+ MLV+ ++P+VILGHSERR I +E NE V +KV A
Sbjct: 65 ANILVSAENAWTK-SGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVA 123
Query: 118 LSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGK 175
+ GLKVIAC+GET QR A T +VVAAQ KAI + +S +W NI+LAYEPVWAIGTGK
Sbjct: 124 IDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGK 183
Query: 176 VATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235
ATP QAQEVH +RKW+ N S E+A ATRI YGGSVN ANC ELA + D+DGFLVGGA
Sbjct: 184 TATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGA 243
Query: 236 SLK-PEFIDIIKSAELK 251
SL +F II S K
Sbjct: 244 SLDAAKFKTIINSVSEK 260
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 159/249 (63%), Gaps = 5/249 (2%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRP 58
M R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KP 57
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
V AQN ++K GAFTGE S + + ++ WVILGHSERR +E ++F+ DK +AL
Sbjct: 58 QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFAL 117
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
QG+ VI +GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG AT
Sbjct: 118 GQGVGVILSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAAT 177
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P AQ++H +RK+L + + A+ RI+YGGS NG+N + DVDGFLVGGASLK
Sbjct: 178 PEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK 237
Query: 239 PEFIDIIKS 247
PEF+DII S
Sbjct: 238 PEFVDIINS 246
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 233 bits (593), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 158/247 (63%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ WVILG SERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGQSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
AQ++H +RK+L + + A+ RI+YGGS NG+N + DVDGFLVGGASLKPE
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 238
Query: 241 FIDIIKS 247
F+DII S
Sbjct: 239 FVDIINS 245
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 231 bits (588), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 159/249 (63%), Gaps = 5/249 (2%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRP 58
M R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KP 57
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
V AQN ++K GAFTGE S + + ++ +VILGHSERR +E ++F+ DK +AL
Sbjct: 58 QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFAL 117
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
QG+ VI C+GETLE+++AG T+DVV Q A+ + V ++N+V+AYEPV AIGTG AT
Sbjct: 118 GQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAAT 177
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P AQ++H +RK+L + + A+ RI+YGGS NG+N + DVDGFLVGGASLK
Sbjct: 178 PEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK 237
Query: 239 PEFIDIIKS 247
PEF+DII S
Sbjct: 238 PEFVDIINS 246
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 158/247 (63%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ +VILGHSERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V ++N+V+AYEPV AIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
AQ++H +RK+L + + A+ RI+YGGS NG+N + DVDGFLVGGASLKPE
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 238
Query: 241 FIDIIKS 247
F+DII S
Sbjct: 239 FVDIINS 245
>pdb|3KRS|A Chain A, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
pdb|3KRS|B Chain B, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
Length = 271
Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 159/251 (63%), Gaps = 3/251 (1%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG- 59
M RK+FVGGN+KCNGT E +K ++ + + + + PG
Sbjct: 22 MSRKYFVGGNFKCNGTKESLKTLIDSFKQVESSNSEVYVFPTSLHISLVKEFFGNDHPGV 81
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
F + +QN GAFTGE+S EML ++++ ++GHSERR +E ++ V +KV L
Sbjct: 82 FKIGSQNISCTGNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLE 141
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GLK++ C+GE+L +RE G T DV+ Q T+A+ D VS SN+V+AYEP+WAIGTG VAT
Sbjct: 142 NGLKIVLCIGESLSERETGKTNDVIQKQLTEALKD-VSDLSNLVIAYEPIWAIGTGVVAT 200
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QAQE H +R+++ +P++++ RIIYGGSV NC EL D+DGFLVGGASLK
Sbjct: 201 PGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK 260
Query: 239 PEFIDIIKSAE 249
P F II+SA+
Sbjct: 261 PTFAKIIESAQ 271
>pdb|2OMA|A Chain A, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
pdb|2OMA|B Chain B, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
Length = 250
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 156/247 (63%), Gaps = 10/247 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 9 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 64
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 65 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHV 123
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 124 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH LR+W+ + +IAA RI+YGGSV N + L D++GFLVGGASLKPEF+
Sbjct: 184 QEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFV 243
Query: 243 DIIKSAE 249
+II++ +
Sbjct: 244 EIIEATK 250
>pdb|1CI1|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1CI1|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1SUX|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
pdb|1SUX|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
Length = 251
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 156/247 (63%), Gaps = 10/247 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 10 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 66 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHV 124
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 125 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 184
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH LR+W+ + +IAA RI+YGGSV N + L D++GFLVGGASLKPEF+
Sbjct: 185 QEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFV 244
Query: 243 DIIKSAE 249
+II++ +
Sbjct: 245 EIIEATK 251
>pdb|1TCD|A Chain A, Trypanosoma Cruzi Triosephosphate Isomerase
pdb|1TCD|B Chain B, Trypanosoma Cruzi Triosephosphate Isomerase
Length = 249
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 156/247 (63%), Gaps = 10/247 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 8 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 63
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 64 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHV 122
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 123 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 182
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH LR+W+ + +IAA RI+YGGSV N + L D++GFLVGGASLKPEF+
Sbjct: 183 QEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFV 242
Query: 243 DIIKSAE 249
+II++ +
Sbjct: 243 EIIEATK 249
>pdb|2VFD|A Chain A, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFD|B Chain B, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFE|A Chain A, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
pdb|2VFE|B Chain B, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
Length = 248
Score = 224 bits (570), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 147/248 (59%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GHSERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|2VFF|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFF|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFG|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|C Chain C, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|D Chain D, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
Length = 248
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHHERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|1YDV|A Chain A, Triosephosphate Isomerase (Tim)
pdb|1YDV|B Chain B, Triosephosphate Isomerase (Tim)
pdb|1M7O|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7O|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7P|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1M7P|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1LYX|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)-
Phosphoglycolate Complex
pdb|1LZO|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|C Chain C, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|D Chain D, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1O5X|A Chain A, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|1O5X|B Chain B, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|2VFI|A Chain A, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
pdb|2VFI|B Chain B, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
Length = 248
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3PSV|A Chain A, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
pdb|3PSV|B Chain B, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH +RR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFDRRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3PSW|A Chain A, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
pdb|3PSW|B Chain B, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 220 bits (560), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH +RR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFQRRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3QSR|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_497370 Gene (Ile-45 Variant)
Length = 255
Score = 219 bits (559), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 156/248 (62%), Gaps = 5/248 (2%)
Query: 3 RKFFVGGNWKCN-GTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFH 61
R FFVGGNWK N T EE +K++ +LN + FL ++ LR +
Sbjct: 5 RTFFVGGNWKANPKTVEEAEKLIEMLNGAKVEGNVEVVVAAPFI--FLPTLQQKLRKDWK 62
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
V+A+N + K GAFTGE++ M+ + I W ILGHSERR IL E +EF+ K +AL G
Sbjct: 63 VSAENVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENG 122
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATP 179
+K+I C GE L +REAG + V+AQ + + + + W ++V+AYEP+WAIGTGKVA+
Sbjct: 123 MKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVAST 182
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239
AQE+ +R L A +IA RI+YGGSV NC ELAA PDVDGFLVGGASL+P
Sbjct: 183 QDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAAXPDVDGFLVGGASLEP 242
Query: 240 EFIDIIKS 247
FI+I+ S
Sbjct: 243 GFINIVNS 250
>pdb|2VFH|A Chain A, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
pdb|2VFH|B Chain B, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
Length = 248
Score = 219 bits (559), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHWERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|1VGA|A Chain A, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|B Chain B, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|C Chain C, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|D Chain D, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1WOA|A Chain A, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|B Chain B, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|C Chain C, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|D Chain D, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOB|A Chain A, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|B Chain B, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|C Chain C, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|D Chain D, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
Length = 248
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 146/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP++AIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLFAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3PWA|A Chain A, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PWA|B Chain B, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 145/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVAFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3PVF|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase Complexed With Pga
pdb|3PY2|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PY2|B Chain B, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 145/248 (58%), Gaps = 1/248 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVSFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240
QAQ VH E+RK + + A RI+YGGSVN NC L Q D+DGFLVG ASLK
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239
Query: 241 FIDIIKSA 248
F+DIIKSA
Sbjct: 240 FVDIIKSA 247
>pdb|3Q37|A Chain A, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|B Chain B, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|C Chain C, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|D Chain D, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes
Length = 251
Score = 216 bits (551), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 158/247 (63%), Gaps = 10/247 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + + +++ + N FL + + R P F +AA
Sbjct: 10 AANWKCNGSQQSLSELIDLFNS----TSINHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERR E NE V DKVA A++ G V
Sbjct: 66 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRAYYGETNEIVADKVAAAVASGFHV 124
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 125 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 184
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFI 242
QEVH LR+W+ + +IAA RI+YGGSV N + L D++GFLVGGASLKPEF+
Sbjct: 185 QEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFV 244
Query: 243 DIIKSAE 249
+II++ +
Sbjct: 245 EIIEATK 251
>pdb|3QST|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_096350 Gene (Val-45 Variant)
Length = 255
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 155/248 (62%), Gaps = 5/248 (2%)
Query: 3 RKFFVGGNWKCN-GTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFH 61
R FFVGGNWK N T +E +K+V +LN + FL ++ LR +
Sbjct: 5 RTFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFV--FLPTLQQKLRKDWK 62
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
V+A+N + K GAFTGE++ M+ + I W ILGHSERR IL E +EF+ K +AL G
Sbjct: 63 VSAENVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENG 122
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATP 179
+K+I C GE L +REAG + V+AQ + + + + W ++V+AYEP+WAIGTGKVA+
Sbjct: 123 MKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVAST 182
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239
AQE+ +R L A +IA RI+YGGSV NC ELAA PDVDGFLVGGASL+
Sbjct: 183 QDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLEA 242
Query: 240 EFIDIIKS 247
FI+I+ S
Sbjct: 243 GFINIVNS 250
>pdb|2DP3|A Chain A, Crystal Structure Of A Double Mutant (C202aA198V) OF
TRIOSEPHOSPHATE Isomerase From Giardia Lamblia
Length = 257
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 156/247 (63%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QA+EVH LRKW + + E A RIIYGGS NG+NC++L P++DGFLVGGASLK
Sbjct: 183 PEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLK 242
Query: 239 PEFIDII 245
PEF+ +I
Sbjct: 243 PEFMTMI 249
>pdb|2YC7|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Complexed With
2-Phosphoglycolic Acid
Length = 257
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 155/247 (62%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QA+EVH LRKW + E A RIIYGGS NG+NC++L P++DGFLVGGASLK
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLK 242
Query: 239 PEFIDII 245
PEF+ +I
Sbjct: 243 PEFMTMI 249
>pdb|4TIM|A Chain A, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|4TIM|B Chain B, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|5TIM|A Chain A, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|5TIM|B Chain B, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|6TIM|A Chain A, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|6TIM|B Chain B, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|1TRD|A Chain A, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TRD|B Chain B, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TPD|A Chain A, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPD|B Chain B, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPF|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1TPF|B Chain B, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1AG1|O Chain O, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1AG1|T Chain T, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1IIG|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIG|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIH|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|1IIH|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|2V5L|A Chain A, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
pdb|2V5L|B Chain B, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
Length = 250
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 156/243 (64%), Gaps = 6/243 (2%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 247
Query: 247 SAE 249
+ +
Sbjct: 248 ATQ 250
>pdb|2YC6|A Chain A, Crystal Structure Of A Triple Mutant (A198v, C202a And
C222n) Of Triosephosphate Isomerase From Giardia Lamblia
Complexed With 2-Phosphoglycolic Acid
Length = 257
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 155/247 (62%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QA+EVH LRKW + + E A RIIYGGS NG+N ++L P++DGFLVGGASLK
Sbjct: 183 PEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLK 242
Query: 239 PEFIDII 245
PEF+ +I
Sbjct: 243 PEFMTMI 249
>pdb|2V0T|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|D Chain D, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|E Chain E, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|F Chain F, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|G Chain G, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|H Chain H, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2C|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 250
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 155/243 (63%), Gaps = 6/243 (2%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKV TP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 247
Query: 247 SAE 249
+ +
Sbjct: 248 ATQ 250
>pdb|3TIM|A Chain A, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|3TIM|B Chain B, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|1TSI|A Chain A, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TSI|B Chain B, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TPE| Chain , Triosephosphate Isomerase (E.C.5.3.1.1)
pdb|1TPE|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
Length = 250
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 155/243 (63%), Gaps = 6/243 (2%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++ RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 188 ALIRSWVSSKIGADVRGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 247
Query: 247 SAE 249
+ +
Sbjct: 248 ATQ 250
>pdb|2YC8|A Chain A, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|B Chain B, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|C Chain C, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|D Chain D, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|E Chain E, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|F Chain F, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|G Chain G, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|H Chain H, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|I Chain I, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|J Chain J, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|K Chain K, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|L Chain L, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|M Chain M, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|N Chain N, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|O Chain O, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|P Chain P, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|Q Chain Q, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|R Chain R, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|S Chain S, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|T Chain T, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia
Length = 255
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 154/247 (62%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QA+EVH LRKW + E A RIIYGGS NG+N ++L P++DGFLVGGASLK
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGGSANGSNDEKLGQCPNIDGFLVGGASLK 242
Query: 239 PEFIDII 245
PEF+ +I
Sbjct: 243 PEFMTMI 249
>pdb|1KV5|A Chain A, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
pdb|1KV5|B Chain B, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
Length = 250
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 155/243 (63%), Gaps = 6/243 (2%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+ W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 188 ALISSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 247
Query: 247 SAE 249
+ +
Sbjct: 248 ATQ 250
>pdb|2J24|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J24|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
Length = 250
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 155/243 (63%), Gaps = 6/243 (2%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYE VWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 247
Query: 247 SAE 249
+ +
Sbjct: 248 ATQ 250
>pdb|3PF3|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Derivatized With Mmts
Length = 257
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 153/247 (61%), Gaps = 5/247 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+K NG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKXNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QA+EVH LRKW + E A RIIYGGS NG+N ++L P++DGFLVGGASLK
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGGSANGSNXEKLGQXPNIDGFLVGGASLK 242
Query: 239 PEFIDII 245
PEF+ +I
Sbjct: 243 PEFMTMI 249
>pdb|2V5B|A Chain A, The Monomerization Of Triosephosphate Isomerase From
Trypanosoma Cruzi
Length = 244
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 149/250 (59%), Gaps = 23/250 (9%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 10 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
QN +A+ L +L+ I WV+LGHSERRL E NE V +KVA A + G
Sbjct: 66 QNAG-----------NADALASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAG 114
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATP 179
VI CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP
Sbjct: 115 FHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATP 174
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239
QAQEVH LR+W+ + +IAA RI+YGGSV N + L D++GFLVGGASLKP
Sbjct: 175 QQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKP 234
Query: 240 EFIDIIKSAE 249
EF++II++ +
Sbjct: 235 EFVEIIEATK 244
>pdb|2Y70|A Chain A, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|B Chain B, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|C Chain C, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|D Chain D, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase
Length = 245
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 148/246 (60%), Gaps = 17/246 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAAQNAG 70
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ I W++L HSERR E NE V DKVA A++ G VI
Sbjct: 71 -----------NADALASLKDFGISWIVLDHSERRAYYGETNEIVADKVAAAVASGFMVI 119
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++R +G T VV Q AIA ++ + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 120 ACIGETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 179
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 180 EAHALIRSWVSSKVGADVAGELRILYGGSVNGRNARTLYQQRDVNGFLVGGASLKPEFVD 239
Query: 244 IIKSAE 249
IIK+ E
Sbjct: 240 IIKATE 245
>pdb|2Y6Z|A Chain A, Crystallographic Structure Of Gm23 An Example Of Catalytic
Migration From Tim To Thiamin Phosphate Synthase
Length = 256
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 148/246 (60%), Gaps = 17/246 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG + + +++ + N + K L P F +AAQN
Sbjct: 22 NWKCNGGGQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAAQNAG 81
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ I W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 82 -----------NADALASLKDFGISWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 130
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++R +G T VV Q AIA ++ + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 131 ACIGETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 190
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 191 EAHALIRSWVSSKVGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVD 250
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 251 IIKATQ 256
>pdb|1MSS|A Chain A, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1MSS|B Chain B, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1TTJ|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 189 bits (481), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 150/246 (60%), Gaps = 19/246 (7%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTSSHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVD 237
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 238 IIKATQ 243
>pdb|1TTI|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 147/243 (60%), Gaps = 13/243 (5%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 69 NADGLA--------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 120
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 121 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 180
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 181 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 240
Query: 247 SAE 249
+ +
Sbjct: 241 ATQ 243
>pdb|2WSQ|A Chain A, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|B Chain B, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|C Chain C, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|D Chain D, Monotim Mutant Rmm0-1, Dimeric Form
Length = 242
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 147/243 (60%), Gaps = 13/243 (5%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 10 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVAPSFVHLAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 NADGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 119
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 120 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETH 179
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 180 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 239
Query: 247 SAE 249
+ +
Sbjct: 240 ATQ 242
>pdb|1ML1|A Chain A, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|C Chain C, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|E Chain E, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|G Chain G, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|I Chain I, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|K Chain K, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
Length = 243
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 151/246 (61%), Gaps = 19/246 (7%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKC+G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCSGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVD 237
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 238 IIKATQ 243
>pdb|1TRI|A Chain A, The Crystal Structure Of An Engineered Monomeric
Triosephosphate Isomerase, Monotim: The Correct
Modelling Of An Eight-Residue Loop
Length = 243
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 150/246 (60%), Gaps = 19/246 (7%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVD 237
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 238 IIKATQ 243
>pdb|1TMH|A Chain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|B Chain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|C Chain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|D Chain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
Length = 254
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
PAQAQ VH +R +A IA I YGGSVN +N EL AQ DVDGFLVGGASLK
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQHDVDGFLVGGASLK 238
Query: 239 PEFIDIIKSAE 249
PEF+DII +AE
Sbjct: 239 PEFVDIINAAE 249
>pdb|2WSR|A Chain A, Monotim Mutant Rmm0-1, Monomeric Form
Length = 242
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 147/243 (60%), Gaps = 13/243 (5%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N + + K L P F +AAQN
Sbjct: 10 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVAPRFVMIAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 NADGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 119
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 120 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETH 179
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+DIIK
Sbjct: 180 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIK 239
Query: 247 SAE 249
+ +
Sbjct: 240 ATQ 242
>pdb|1B9B|A Chain A, Triosephosphate Isomerase Of Thermotoga Maritima
pdb|1B9B|B Chain B, Triosephosphate Isomerase Of Thermotoga Maritima
Length = 255
Score = 181 bits (458), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 139/248 (56%), Gaps = 6/248 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVL-NE-GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
RK + GNWK + T E KK VS+L NE +G + S
Sbjct: 3 RKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSG--RNI 60
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGEIS ML + + +VI+GHSERR I E +EF+ KV L +
Sbjct: 61 KLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEK 120
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKA--IADRVSSWSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGETLE+RE G T VV Q + +V+AYEPVWAIGTG+VAT
Sbjct: 121 GMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVAT 180
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
P QAQEVH +RK L E A + RI+YGGS+ N L Q D+DG LVGGASLK
Sbjct: 181 PQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLK 240
Query: 239 PEFIDIIK 246
FI++ +
Sbjct: 241 ESFIELAR 248
>pdb|2V2D|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 242
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 149/246 (60%), Gaps = 20/246 (8%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 11 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 68 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 116
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKV TP QAQ
Sbjct: 117 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQ 176
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVGGASLKPEF+D
Sbjct: 177 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVD 236
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 237 IIKATQ 242
>pdb|4IOT|A Chain A, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
pdb|4IOT|B Chain B, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
Length = 255
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 142/252 (56%), Gaps = 8/252 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
PAQAQ VH +R +A IA I YGGSVN +N EL AQPD+DG LVGGASLK
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLK 238
Query: 239 PE-FIDIIKSAE 249
+ F I+K+AE
Sbjct: 239 ADAFAVIVKAAE 250
>pdb|1TRE|A Chain A, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
pdb|1TRE|B Chain B, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
Length = 255
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 142/252 (56%), Gaps = 8/252 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVNLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
PAQAQ VH +R +A IA I YGGSVN +N EL AQPD+DG LVGGASLK
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLK 238
Query: 239 PE-FIDIIKSAE 249
+ F I+K+AE
Sbjct: 239 ADAFAVIVKAAE 250
>pdb|1DKW|A Chain A, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
pdb|1DKW|B Chain B, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
Length = 238
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 144/243 (59%), Gaps = 17/243 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
E S L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 66 -------GNEDSLPSLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 129 GETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 187 FELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246
+R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVG LKPEF+DIIK
Sbjct: 179 ALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVG---LKPEFVDIIK 235
Query: 247 SAE 249
+ +
Sbjct: 236 ATQ 238
>pdb|2VEI|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|C Chain C, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
Length = 238
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 147/246 (59%), Gaps = 23/246 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 66
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 67 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 115
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 116 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 175
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFLVG LKPEF+D
Sbjct: 176 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVG---LKPEFVD 232
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 233 IIKATQ 238
>pdb|2VEK|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEK|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|A Chain A, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|B Chain B, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2X16|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X16|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
Length = 238
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 23/246 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 66
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 67 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 115
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q AIA ++ W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 116 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 175
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 243
E H +R W+ + ++A RI+YGGSVNG N + L Q DV+GFL G LKPEF+D
Sbjct: 176 EAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLAG---LKPEFVD 232
Query: 244 IIKSAE 249
IIK+ +
Sbjct: 233 IIKATQ 238
>pdb|3UWU|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWU|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWV|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWV|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWW|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWW|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWY|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWY|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWZ|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
pdb|3UWZ|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
Length = 261
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 136/252 (53%), Gaps = 5/252 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
R + GNWK N T +E K V+ L VK G
Sbjct: 10 RTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGL 69
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGE S L +L + +V++GHSERR + +E +E + K
Sbjct: 70 EIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKH 129
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGET E+RE+G DVV Q K +S ++V+AYEP+WAIGTGK +T
Sbjct: 130 GMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSST 189
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
A E+ +R+ + +S E++ ATRI YGGSV N KE AQ D+DG LVGGASLK
Sbjct: 190 SEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLK 249
Query: 239 PE-FIDIIKSAE 249
E F+ +++ A+
Sbjct: 250 VEDFVQLLEGAK 261
>pdb|3M9Y|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
pdb|3M9Y|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
Length = 254
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 136/252 (53%), Gaps = 5/252 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
R + GNWK N T +E K V+ L VK G
Sbjct: 3 RTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGL 62
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGE S L +L + +V++GHSERR + +E +E + K
Sbjct: 63 EIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKH 122
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGET E+RE+G DVV Q K +S ++V+AYEP+WAIGTGK +T
Sbjct: 123 GMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSST 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238
A E+ +R+ + +S E++ ATRI YGGSV N KE AQ D+DG LVGGASLK
Sbjct: 183 SEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLK 242
Query: 239 PE-FIDIIKSAE 249
E F+ +++ A+
Sbjct: 243 VEDFVQLLEGAK 254
>pdb|2BTM|A Chain A, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
pdb|2BTM|B Chain B, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
Length = 252
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 139/249 (55%), Gaps = 5/249 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFH 61
RK + GNWK NGT E + V + +G FL LV+++
Sbjct: 1 RKPIIAGNWKMNGTLAEAVQFVEDV-KGHVPPADEVISVVCAPFLFLDRLVQAADGTDLK 59
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
+ AQ GA+TGE+S ML +L + +VILGHSERR + E +E V KV A ++G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATP 179
L I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239
A V +R + PE A A RI YGGSV N ++ AQ +DG LVGGASL+P
Sbjct: 180 EDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEP 239
Query: 240 -EFIDIIKS 247
F+ ++++
Sbjct: 240 ASFLQLVEA 248
>pdb|1BTM|A Chain A, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
pdb|1BTM|B Chain B, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
Length = 252
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 138/249 (55%), Gaps = 5/249 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFH 61
RK + GNWK + T E + V + +G FL LV+++
Sbjct: 1 RKPIIAGNWKMHKTLAEAVQFVEDV-KGHVPPADEVISVVCAPFLFLDRLVQAADGTDLK 59
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
+ AQ GA+TGE+S ML +L + +VILGHSERR + E +E V KV A ++G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATP 179
L I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239
A V +R + PE A A RI YGGSV N ++ AQ +DG LVGGASL+P
Sbjct: 180 EDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGPLVGGASLEP 239
Query: 240 -EFIDIIKS 247
F+ ++++
Sbjct: 240 ASFLQLVEA 248
>pdb|4G1K|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|C Chain C, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|D Chain D, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
Length = 272
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 139/245 (56%), Gaps = 8/245 (3%)
Query: 9 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNC 67
GNWK +G + +++ + +G +L ++ L+ G +Q+
Sbjct: 32 GNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDV 91
Query: 68 WVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIAC 127
+ GA+TGE++A M+ + I+GHSERR E NE V K AL+ GL I C
Sbjct: 92 SAHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVC 151
Query: 128 VGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEV 185
VGETL +REAG+T VV AQ A+ +S + IV+AYEPVWAIGTGK AT QAQ+V
Sbjct: 152 VGETLAEREAGTTEQVVGAQLDAVLAVLSPDEAARIVVAYEPVWAIGTGKSATAEQAQQV 211
Query: 186 HFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDI 244
H LR L A + ++ ++YGGSV N EL QPD+DG L+GGASLK +F+ I
Sbjct: 212 HAFLRGRLAAKGAGHVS----LLYGGSVKADNAAELFGQPDIDGGLIGGASLKSGDFLAI 267
Query: 245 IKSAE 249
++A+
Sbjct: 268 CRAAK 272
>pdb|1AW1|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW2|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus
Length = 256
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 126/241 (52%), Gaps = 7/241 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PG 59
R V GNWK NG+ E V +++ LN + F+ L + +L
Sbjct: 2 RHPVVMGNWKLNGSKEMVVDLLNGLN-AELEGVTGVDVAVAPPALFVDLAERTLTEAGSA 60
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
+ AQN + GAFTG++S ML +I+GHSERR E +EFV K A+
Sbjct: 61 IILGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKE 120
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVA 177
GL + C+GE+ Q EAG TM V A Q A+ + V + ++AYEP+WAIGTGK A
Sbjct: 121 NGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAA 180
Query: 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237
T AQ +H ++R +A S +A I YGGSV N AQPD+DG LVGGA+L
Sbjct: 181 TAEDAQRIHAQIRAH-IAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAAL 239
Query: 238 K 238
Sbjct: 240 D 240
>pdb|1YYA|A Chain A, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
pdb|1YYA|B Chain B, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
Length = 250
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 133/252 (52%), Gaps = 10/252 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL---RPG 59
R+ V GNWK + TP E + + L + L + K L + G
Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELK--RLLPPLQSEAAVLPAFPILPVAKEVLAETQVG 59
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
+ AQ+ K GA+TGE+SA ML +L + I+GHSERR E + V +K L
Sbjct: 60 Y--GAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLE 117
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN--IVLAYEPVWAIGTGKVA 177
+G+ I CVGE LE RE G + Q + + V +V+AYEPVWAIGTGK A
Sbjct: 118 EGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNA 177
Query: 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237
TP A+ +H +RK L A+ RI+YGGSVN N +L + P+VDG LVGGASL
Sbjct: 178 TPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASL 237
Query: 238 KPE-FIDIIKSA 248
+ E F+ +++ A
Sbjct: 238 ELESFLALLRIA 249
>pdb|3TA6|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TA6|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TAO|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
pdb|3TAO|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
Length = 267
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 131/250 (52%), Gaps = 12/250 (4%)
Query: 1 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL 56
M RK + GNWK N E V+KI L + + +
Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGD 60
Query: 57 RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAY 116
+ AQ+ GA+TG++S L L +V++GHSERR NE + V K A
Sbjct: 61 KLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAAT 120
Query: 117 ALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAI 171
AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAI
Sbjct: 121 ALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAI 177
Query: 172 GTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 231
GTG+VA+ A AQEV +RK L + SP IA R++YGGSVN N ++ AQ DVDG L
Sbjct: 178 GTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGL 237
Query: 232 VGGASLKPEF 241
VGGASL E
Sbjct: 238 VGGASLDGEH 247
>pdb|3GVG|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
pdb|3GVG|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
Length = 283
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 3 RKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRP 58
RK + GNWK N E V+KI L + + + +
Sbjct: 25 RKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKL 84
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
AQ+ GA+TG++S L L +V++GHSERR NE + V K A AL
Sbjct: 85 RLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATAL 144
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGT 173
GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGT
Sbjct: 145 KHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGT 201
Query: 174 GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG 233
G+VA+ A AQEV +RK L + SP IA R++YGGSVN N ++ AQ DVDG LVG
Sbjct: 202 GRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVG 261
Query: 234 GASLKPEF 241
GASL E
Sbjct: 262 GASLDGEH 269
>pdb|3KXQ|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
pdb|3KXQ|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
Length = 275
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 6 FVGGNWKCNGTPE---EVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
F+ GNWK NGT E E++ I + ++ G+ F L ++ G
Sbjct: 29 FIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLG- 87
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QNC G +TG+ISA ML VI+GHSERR + E + V KV A
Sbjct: 88 ---GQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRA 144
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
GL + CVGETLE+R++ +DV+ Q + ++ NI++AYEPVWA+GTG AT A
Sbjct: 145 GLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSA 204
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP- 239
EVH + + + E A R++YGGSV +N EL + V+G L+GGASLK
Sbjct: 205 DVAEVHAFIHHKMHSRFGDE-GAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLKAI 263
Query: 240 EFIDI 244
+F+ I
Sbjct: 264 DFLTI 268
>pdb|2JGQ|A Chain A, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
pdb|2JGQ|B Chain B, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
Length = 233
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 108/191 (56%), Gaps = 14/191 (7%)
Query: 48 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELN 107
F GL+ +S F + QN + + GAFTGEI+++ L L+I +++GHSERR +L E
Sbjct: 42 FFGLLPNSFL-HFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRTLLKESP 100
Query: 108 EFVGDKVAYALSQGLKVIACVGETLEQREAG--STMDVVAAQTKAIADRVSSWSNIVLAY 165
F+ +K + S+ K++ C+GE L RE G + + ++ Q + I ++ N+V+AY
Sbjct: 101 SFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENID---LNYPNLVVAY 157
Query: 166 EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQP 225
EP+WAIGT K A+ H L++ L T ++YGGSVN N KE+
Sbjct: 158 EPIWAIGTKKSASLEDIYLTHGFLKQIL--------NQKTPLLYGGSVNTQNAKEILGID 209
Query: 226 DVDGFLVGGAS 236
VDG L+G AS
Sbjct: 210 SVDGLLIGSAS 220
>pdb|3S6D|A Chain A, Crystal Structure Of A Putative Triosephosphate Isomerase
From Coccidioides Immitis
Length = 310
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYA 117
P + AQ+C+ G +TGEIS L ++ + V LGH+ERR I E ++ V K A A
Sbjct: 110 PPLLLGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAA 169
Query: 118 LSQGLKVIACVGET-----LEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIG 172
QGL + C+GE + G + AQ + + + + + ++ AYEPVWAIG
Sbjct: 170 ADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIG 229
Query: 173 TGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLV 232
+ A V +R ++ RI+YGGS +VDG +
Sbjct: 230 KPQPARVDHVGAVVSGIRS-VIERIDRHRKGEVRILYGGSAGPGLWGPGGLGKEVDGMFL 288
Query: 233 G 233
G
Sbjct: 289 G 289
>pdb|1W0M|A Chain A, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|B Chain B, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|C Chain C, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|D Chain D, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|E Chain E, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|F Chain F, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|G Chain G, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|H Chain H, Triosephosphate Isomerase From Thermoproteus Tenax
Length = 226
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 49 LGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNE 108
LGLV S+ V AQ V+ GGA T +S E + VIL HSE L LN+L
Sbjct: 48 LGLVSQSVD--IPVYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLAR 105
Query: 109 FVGDKVAYALSQGLKVIAC 127
VA A S GL V+ C
Sbjct: 106 L----VAKAKSLGLDVVVC 120
>pdb|2H6R|A Chain A, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|B Chain B, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|C Chain C, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|D Chain D, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|E Chain E, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|F Chain F, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|G Chain G, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|H Chain H, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
Length = 219
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 22/144 (15%)
Query: 73 GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETL 132
G+ TG I AE + + ++ HSE+R++L ++ E V +K + GL+ I C
Sbjct: 67 GSHTGHILAEAIKDCGCKGTLINHSEKRMLLADI-EAVINKCK---NLGLETIVCTNNI- 121
Query: 133 EQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKW 192
+KA+A + S +A EP IGTG + A + V +R
Sbjct: 122 -------------NTSKAVA----ALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAV 164
Query: 193 LLANTSPEIAAATRIIYGGSVNGA 216
N ++ I G V A
Sbjct: 165 KEINKDVKVLCGAGISKGEDVKAA 188
>pdb|1HG3|A Chain A, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|B Chain B, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|C Chain C, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|D Chain D, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|E Chain E, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|F Chain F, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|G Chain G, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|H Chain H, Crystal Structure Of Tetrameric Tim From Pyrococcus Woesei
Length = 225
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
V AQ+ K G+ TG + E + +L HSE R+IL +L
Sbjct: 62 VFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLE-------------- 107
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQ 181
+ + E M +V + A++ V++ + +A EP IGTG + A+
Sbjct: 108 --------AAIRRAEEVGLMTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAK 159
Query: 182 AQEVHFELRKWLLANTSPEI 201
+ + + L+ +PE+
Sbjct: 160 PEVITNTVE--LVKKVNPEV 177
>pdb|3MPO|A Chain A, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|B Chain B, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|C Chain C, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|D Chain D, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
Length = 279
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 102 ILNELNEFVG---DKVAYALSQGLKVIACVGETL 132
+LNE NE D V A +QG+KV+ C G L
Sbjct: 16 LLNEKNELAQATIDAVQAAKAQGIKVVLCTGRPL 49
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,159,285
Number of Sequences: 62578
Number of extensions: 264392
Number of successful extensions: 816
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 591
Number of HSP's gapped (non-prelim): 93
length of query: 251
length of database: 14,973,337
effective HSP length: 96
effective length of query: 155
effective length of database: 8,965,849
effective search space: 1389706595
effective search space used: 1389706595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)