Query 025540
Match_columns 251
No_of_seqs 178 out of 1113
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 12:24:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ta6_A Triosephosphate isomera 100.0 4.5E-99 2E-103 676.8 27.0 250 1-250 1-257 (267)
2 1o5x_A TIM, triosephosphate is 100.0 2.9E-98 1E-102 665.9 28.4 247 1-248 1-247 (248)
3 4g1k_A Triosephosphate isomera 100.0 2.3E-98 8E-103 673.4 28.0 243 2-248 25-271 (272)
4 3th6_A Triosephosphate isomera 100.0 3.4E-98 1E-102 665.8 27.2 246 1-248 1-247 (249)
5 3krs_A Triosephosphate isomera 100.0 7.8E-98 3E-102 669.6 27.5 245 1-248 22-270 (271)
6 3qst_A Triosephosphate isomera 100.0 8.2E-98 3E-102 665.4 27.4 247 2-250 4-253 (255)
7 3kxq_A Triosephosphate isomera 100.0 3.2E-98 1E-102 672.8 24.7 245 2-249 25-273 (275)
8 2i9e_A Triosephosphate isomera 100.0 1.4E-97 5E-102 664.5 28.1 246 1-248 1-247 (259)
9 3m9y_A Triosephosphate isomera 100.0 9.8E-98 3E-102 664.6 26.7 245 2-248 2-253 (254)
10 1r2r_A TIM, triosephosphate is 100.0 2.3E-97 8E-102 660.1 27.8 244 1-246 2-246 (248)
11 1ney_A TIM, triosephosphate is 100.0 2.2E-97 7E-102 659.7 27.0 245 2-248 1-246 (247)
12 1b9b_A TIM, protein (triosepho 100.0 1.1E-97 4E-102 663.8 24.8 247 1-248 1-253 (255)
13 1yya_A Triosephosphate isomera 100.0 4.8E-97 2E-101 658.8 28.2 245 2-248 1-249 (250)
14 2vxn_A Triosephosphate isomera 100.0 5.6E-97 2E-101 658.7 27.7 244 2-248 4-250 (251)
15 2j27_A Triosephosphate isomera 100.0 5.8E-97 2E-101 658.3 27.2 244 2-248 3-249 (250)
16 2yc6_A Triosephosphate isomera 100.0 7E-97 2E-101 659.7 27.0 246 2-249 3-253 (257)
17 1tre_A Triosephosphate isomera 100.0 5.6E-97 2E-101 659.7 25.5 245 2-248 1-249 (255)
18 1mo0_A TIM, triosephosphate is 100.0 2.3E-96 8E-101 660.8 29.6 245 2-248 22-267 (275)
19 2btm_A TIM, protein (triosepho 100.0 8.6E-97 3E-101 657.5 26.3 247 3-250 1-251 (252)
20 1aw2_A Triosephosphate isomera 100.0 2E-96 7E-101 656.8 26.8 246 2-249 1-252 (256)
21 1m6j_A TIM, TPI, triosephospha 100.0 1.1E-96 4E-101 660.3 24.6 247 1-250 2-259 (261)
22 3s6d_A Putative triosephosphat 100.0 1E-92 3.4E-97 644.5 21.3 247 2-249 34-306 (310)
23 2v5b_A Triosephosphate isomera 100.0 2.8E-92 9.7E-97 626.4 20.4 236 2-247 4-242 (244)
24 2jgq_A Triosephosphate isomera 100.0 1.8E-91 6E-96 617.4 19.7 229 4-247 1-232 (233)
25 1hg3_A Triosephosphate isomera 100.0 1.6E-68 5.6E-73 469.7 19.0 213 2-249 4-222 (225)
26 1w0m_A TIM, triosephosphate is 100.0 2.1E-68 7.1E-73 469.2 16.0 212 2-248 1-218 (226)
27 2h6r_A Triosephosphate isomera 100.0 1.5E-53 5.2E-58 372.4 14.6 209 6-249 2-216 (219)
28 2p10_A MLL9387 protein; putati 99.5 1.3E-13 4.5E-18 123.8 11.4 151 54-238 87-264 (286)
29 1wv2_A Thiazole moeity, thiazo 98.3 2E-06 6.9E-11 76.4 10.0 135 69-238 78-221 (265)
30 1i4n_A Indole-3-glycerol phosp 98.1 8.4E-05 2.9E-09 65.7 14.9 181 5-238 41-235 (251)
31 3tha_A Tryptophan synthase alp 97.9 3.4E-05 1.2E-09 68.3 8.5 123 78-238 106-232 (252)
32 1geq_A Tryptophan synthase alp 97.9 0.00059 2E-08 58.7 15.7 125 78-238 98-225 (248)
33 2htm_A Thiazole biosynthesis p 97.8 3.4E-05 1.2E-09 68.7 6.6 136 69-238 68-212 (268)
34 3nav_A Tryptophan synthase alp 97.6 0.00026 8.8E-09 63.2 10.0 123 78-237 115-241 (271)
35 3f4w_A Putative hexulose 6 pho 97.6 0.00056 1.9E-08 57.4 11.5 181 4-238 2-192 (211)
36 1vc4_A Indole-3-glycerol phosp 97.6 0.00038 1.3E-08 61.3 10.6 125 81-243 121-247 (254)
37 1h1y_A D-ribulose-5-phosphate 97.6 0.0005 1.7E-08 59.0 11.1 123 81-238 80-206 (228)
38 3tsm_A IGPS, indole-3-glycerol 97.5 0.00073 2.5E-08 60.3 11.5 154 37-238 95-254 (272)
39 1tqj_A Ribulose-phosphate 3-ep 97.5 0.00046 1.6E-08 59.6 9.7 137 80-248 77-217 (230)
40 3vnd_A TSA, tryptophan synthas 97.5 0.00026 8.9E-09 63.0 8.2 123 78-237 113-239 (267)
41 3jr2_A Hexulose-6-phosphate sy 97.5 0.0029 1E-07 53.8 14.3 175 15-238 16-199 (218)
42 3igs_A N-acetylmannosamine-6-p 97.5 0.0041 1.4E-07 53.9 15.4 178 18-247 36-229 (232)
43 2ekc_A AQ_1548, tryptophan syn 97.4 0.0017 5.8E-08 57.1 11.8 126 78-238 112-239 (262)
44 1rd5_A Tryptophan synthase alp 97.2 0.0014 4.7E-08 57.2 9.6 119 83-238 113-235 (262)
45 3q58_A N-acetylmannosamine-6-p 97.2 0.011 3.9E-07 51.0 15.3 150 43-238 55-215 (229)
46 3ovp_A Ribulose-phosphate 3-ep 97.1 0.0017 6E-08 56.1 9.1 123 81-238 80-202 (228)
47 1ujp_A Tryptophan synthase alp 97.1 0.0013 4.4E-08 58.5 8.0 124 77-238 108-234 (271)
48 1qop_A Tryptophan synthase alp 97.1 0.014 4.7E-07 51.3 14.5 125 77-238 111-239 (268)
49 3cu2_A Ribulose-5-phosphate 3- 97.0 0.0051 1.7E-07 53.6 10.3 157 44-238 54-222 (237)
50 3ctl_A D-allulose-6-phosphate 96.9 0.0049 1.7E-07 53.5 9.5 133 81-246 73-211 (231)
51 1rpx_A Protein (ribulose-phosp 96.8 0.013 4.4E-07 49.8 11.4 134 80-248 83-223 (230)
52 3inp_A D-ribulose-phosphate 3- 96.8 0.0058 2E-07 53.7 9.2 129 81-243 102-234 (246)
53 1pii_A N-(5'phosphoribosyl)ant 96.8 0.032 1.1E-06 53.0 15.0 148 43-238 94-241 (452)
54 3qja_A IGPS, indole-3-glycerol 96.7 0.0059 2E-07 54.2 9.1 126 81-245 128-255 (272)
55 2fli_A Ribulose-phosphate 3-ep 96.7 0.015 5E-07 48.8 10.8 132 81-246 77-212 (220)
56 1xm3_A Thiazole biosynthesis p 96.6 0.025 8.5E-07 49.7 12.5 134 70-238 71-212 (264)
57 1xi3_A Thiamine phosphate pyro 96.6 0.015 5.2E-07 48.3 10.3 115 80-238 78-195 (215)
58 1y0e_A Putative N-acetylmannos 96.5 0.28 9.7E-06 40.9 17.6 34 204-238 175-209 (223)
59 1h5y_A HISF; histidine biosynt 96.3 0.02 6.7E-07 48.4 9.3 72 162-248 170-244 (253)
60 1to3_A Putative aldolase YIHT; 95.8 0.069 2.4E-06 48.0 11.0 133 78-239 111-260 (304)
61 2v82_A 2-dehydro-3-deoxy-6-pho 95.8 0.14 4.6E-06 42.7 12.1 165 14-238 15-181 (212)
62 3vzx_A Heptaprenylglyceryl pho 95.3 0.02 7E-07 49.7 5.4 46 204-250 180-227 (228)
63 1yad_A Regulatory protein TENI 95.0 0.2 6.8E-06 42.0 10.7 118 80-238 80-197 (221)
64 2tps_A Protein (thiamin phosph 95.0 0.16 5.5E-06 42.4 9.9 34 204-238 172-205 (227)
65 2y88_A Phosphoribosyl isomeras 94.7 0.032 1.1E-06 47.4 5.0 71 164-248 167-242 (244)
66 3exr_A RMPD (hexulose-6-phosph 94.7 0.18 6.2E-06 43.0 9.5 176 15-238 15-201 (221)
67 1q6o_A Humps, 3-keto-L-gulonat 94.4 0.65 2.2E-05 38.9 12.3 184 1-238 1-196 (216)
68 1viz_A PCRB protein homolog; s 94.2 0.034 1.1E-06 48.6 3.9 44 204-248 182-227 (240)
69 2nv1_A Pyridoxal biosynthesis 94.0 0.08 2.7E-06 47.1 6.0 34 204-238 207-243 (305)
70 1yxy_A Putative N-acetylmannos 93.8 0.72 2.5E-05 38.8 11.5 34 204-238 186-220 (234)
71 2gjl_A Hypothetical protein PA 93.8 0.29 9.8E-06 43.8 9.3 125 80-246 88-221 (328)
72 1thf_D HISF protein; thermophI 93.6 0.038 1.3E-06 47.3 3.1 45 204-249 195-242 (253)
73 1ka9_F Imidazole glycerol phos 93.5 0.092 3.2E-06 44.7 5.4 45 204-249 196-243 (252)
74 1vzw_A Phosphoribosyl isomeras 93.5 0.13 4.3E-06 43.8 6.2 44 204-247 190-238 (244)
75 1wa3_A 2-keto-3-deoxy-6-phosph 93.4 1.2 4E-05 36.6 12.0 169 8-238 13-183 (205)
76 3w01_A Heptaprenylglyceryl pho 93.3 0.043 1.5E-06 47.9 3.0 44 204-248 186-231 (235)
77 2qjg_A Putative aldolase MJ040 93.3 0.64 2.2E-05 40.1 10.5 125 79-238 103-242 (273)
78 3bo9_A Putative nitroalkan dio 93.2 0.27 9.1E-06 44.2 8.1 115 80-238 94-210 (326)
79 2z6i_A Trans-2-enoyl-ACP reduc 93.1 0.51 1.7E-05 42.4 9.8 115 80-238 80-196 (332)
80 3vk5_A MOEO5; TIM barrel, tran 92.7 0.16 5.6E-06 45.4 5.9 36 204-239 227-262 (286)
81 1vhc_A Putative KHG/KDPG aldol 92.7 1.5 5.3E-05 37.4 11.9 162 16-238 27-190 (224)
82 1wbh_A KHG/KDPG aldolase; lyas 92.4 2.2 7.5E-05 36.1 12.4 172 16-248 26-205 (214)
83 1mxs_A KDPG aldolase; 2-keto-3 91.7 3.4 0.00012 35.2 12.9 124 58-238 76-199 (225)
84 2f6u_A GGGPS, (S)-3-O-geranylg 91.6 0.068 2.3E-06 46.5 2.0 34 204-238 190-223 (234)
85 2yw3_A 4-hydroxy-2-oxoglutarat 91.3 4.1 0.00014 34.0 12.8 41 204-245 151-191 (207)
86 3iwp_A Copper homeostasis prot 91.1 0.71 2.4E-05 41.3 8.1 152 42-234 74-239 (287)
87 2w6r_A Imidazole glycerol phos 91.0 0.17 6E-06 43.4 4.0 43 204-247 200-245 (266)
88 3o63_A Probable thiamine-phosp 91.0 0.95 3.2E-05 39.2 8.7 69 160-238 156-224 (243)
89 1qo2_A Molecule: N-((5-phospho 90.9 0.086 2.9E-06 44.9 1.9 44 204-247 188-239 (241)
90 4adt_A Pyridoxine biosynthetic 90.8 0.41 1.4E-05 42.9 6.4 33 205-238 208-243 (297)
91 3khj_A Inosine-5-monophosphate 90.6 2.1 7.1E-05 39.2 11.1 34 204-238 207-241 (361)
92 3tdn_A FLR symmetric alpha-bet 90.6 0.048 1.6E-06 46.7 0.0 37 204-241 200-238 (247)
93 3b0p_A TRNA-dihydrouridine syn 90.5 2.4 8.1E-05 38.4 11.3 40 204-245 197-239 (350)
94 1ep3_A Dihydroorotate dehydrog 89.7 1.9 6.4E-05 37.6 9.6 43 204-247 241-286 (311)
95 1tqx_A D-ribulose-5-phosphate 88.4 2.7 9.2E-05 36.0 9.4 127 69-238 73-206 (227)
96 3ajx_A 3-hexulose-6-phosphate 88.1 0.54 1.8E-05 38.7 4.7 190 4-248 2-202 (207)
97 3ffs_A Inosine-5-monophosphate 87.8 3.9 0.00013 38.0 10.8 34 204-238 246-280 (400)
98 1z41_A YQJM, probable NADH-dep 87.5 8.1 0.00028 34.5 12.5 43 204-246 277-322 (338)
99 1ece_A Endocellulase E1; glyco 87.4 6.7 0.00023 34.5 11.8 124 80-213 49-204 (358)
100 3tdn_A FLR symmetric alpha-bet 87.1 0.36 1.2E-05 41.1 3.1 44 204-247 79-124 (247)
101 4gj1_A 1-(5-phosphoribosyl)-5- 86.9 0.9 3.1E-05 39.1 5.6 45 204-248 75-121 (243)
102 3o07_A Pyridoxine biosynthesis 86.3 0.42 1.4E-05 42.8 3.1 34 204-238 198-234 (291)
103 1o4u_A Type II quinolic acid p 86.1 2.5 8.6E-05 37.6 8.1 52 177-238 222-273 (285)
104 4gj1_A 1-(5-phosphoribosyl)-5- 85.6 11 0.00037 32.2 11.8 72 163-248 168-241 (243)
105 1r30_A Biotin synthase; SAM ra 85.2 20 0.00069 31.9 14.8 205 15-247 99-330 (369)
106 2w6r_A Imidazole glycerol phos 84.5 0.37 1.3E-05 41.3 1.9 43 204-246 74-121 (266)
107 2agk_A 1-(5-phosphoribosyl)-5- 83.6 1.8 6.2E-05 37.7 6.0 43 204-248 76-125 (260)
108 2whl_A Beta-mannanase, baman5; 83.3 7.7 0.00026 33.4 10.0 52 80-131 36-87 (294)
109 3cwo_X Beta/alpha-barrel prote 82.5 1 3.6E-05 36.6 3.8 45 204-249 174-221 (237)
110 3lab_A Putative KDPG (2-keto-3 82.4 22 0.00076 30.2 12.3 172 15-248 22-208 (217)
111 1vhn_A Putative flavin oxidore 82.2 0.75 2.6E-05 41.0 3.0 43 204-246 183-228 (318)
112 3bw2_A 2-nitropropane dioxygen 81.9 13 0.00043 33.5 11.2 34 204-238 208-242 (369)
113 1jvn_A Glutamine, bifunctional 81.9 1.3 4.4E-05 42.8 4.7 72 163-248 469-543 (555)
114 1ka9_F Imidazole glycerol phos 81.9 0.82 2.8E-05 38.7 3.0 45 204-248 75-121 (252)
115 2agk_A 1-(5-phosphoribosyl)-5- 81.6 2.3 7.7E-05 37.0 5.8 77 162-248 173-256 (260)
116 3jug_A Beta-mannanase; TIM-bar 81.6 9.3 0.00032 34.5 10.1 52 80-131 59-110 (345)
117 2v5j_A 2,4-dihydroxyhept-2-ENE 81.4 12 0.0004 33.0 10.5 128 80-237 52-201 (287)
118 2zbt_A Pyridoxal biosynthesis 80.9 0.74 2.5E-05 40.4 2.4 34 204-238 207-243 (297)
119 2yzr_A Pyridoxal biosynthesis 80.8 1.2 4E-05 40.7 3.7 34 204-238 240-276 (330)
120 3aof_A Endoglucanase; glycosyl 80.6 26 0.0009 30.0 13.1 54 78-131 36-97 (317)
121 3nl6_A Thiamine biosynthetic b 80.4 22 0.00076 34.1 12.8 71 160-238 132-214 (540)
122 1bqc_A Protein (beta-mannanase 80.2 6.7 0.00023 33.8 8.4 52 79-130 36-87 (302)
123 4fo4_A Inosine 5'-monophosphat 79.8 16 0.00056 33.3 11.2 34 204-238 211-245 (366)
124 3nco_A Endoglucanase fncel5A; 79.7 29 0.00099 30.0 12.5 126 73-213 39-180 (320)
125 1thf_D HISF protein; thermophI 79.6 1.4 4.8E-05 37.2 3.7 45 204-248 74-120 (253)
126 1qpo_A Quinolinate acid phosph 79.6 3 0.0001 37.0 6.0 52 177-238 223-274 (284)
127 2bdq_A Copper homeostasis prot 76.8 2.5 8.4E-05 36.5 4.4 155 42-233 36-207 (224)
128 1qtw_A Endonuclease IV; DNA re 76.3 16 0.00053 30.6 9.4 81 106-189 87-168 (285)
129 4hty_A Cellulase; (alpha/beta) 76.2 11 0.00038 33.6 8.8 129 78-212 88-230 (359)
130 1vyr_A Pentaerythritol tetrani 76.0 1.6 5.6E-05 39.8 3.2 39 204-242 294-333 (364)
131 4avf_A Inosine-5'-monophosphat 75.6 12 0.00043 35.2 9.4 33 204-237 332-365 (490)
132 3usb_A Inosine-5'-monophosphat 75.5 29 0.001 32.9 12.0 33 204-237 359-392 (511)
133 3hh8_A Metal ABC transporter s 75.2 9.7 0.00033 33.5 8.0 60 160-230 184-259 (294)
134 2b7n_A Probable nicotinate-nuc 75.1 4.4 0.00015 35.5 5.7 50 177-236 211-260 (273)
135 3glc_A Aldolase LSRF; TIM barr 75.1 24 0.00082 31.3 10.6 135 80-246 130-271 (295)
136 3ceu_A Thiamine phosphate pyro 74.6 3.4 0.00012 34.3 4.6 74 161-247 109-193 (210)
137 1xvl_A Mn transporter, MNTC pr 74.5 14 0.00049 32.8 9.1 75 144-229 189-279 (321)
138 2r14_A Morphinone reductase; H 73.8 1.7 5.7E-05 40.0 2.7 39 204-242 299-338 (377)
139 1qo2_A Molecule: N-((5-phospho 73.4 1.1 3.9E-05 37.8 1.4 41 204-244 73-115 (241)
140 3hgj_A Chromate reductase; TIM 73.1 2.6 8.9E-05 38.1 3.8 44 204-247 288-334 (349)
141 3gr7_A NADPH dehydrogenase; fl 72.9 2 6.7E-05 38.9 2.9 44 204-247 277-323 (340)
142 3ujp_A Mn transporter subunit; 72.8 14 0.00047 32.8 8.5 74 144-228 175-264 (307)
143 1wky_A Endo-beta-1,4-mannanase 72.8 27 0.00093 32.5 10.9 51 80-130 44-94 (464)
144 2gou_A Oxidoreductase, FMN-bin 72.2 2 7E-05 39.1 2.9 39 204-242 293-332 (365)
145 3l5l_A Xenobiotic reductase A; 71.6 2.3 8E-05 38.6 3.1 44 204-247 295-341 (363)
146 4h41_A Putative alpha-L-fucosi 71.6 27 0.00093 31.6 10.2 107 81-192 60-187 (340)
147 4e38_A Keto-hydroxyglutarate-a 71.0 49 0.0017 28.2 15.2 171 16-247 44-222 (232)
148 1qnr_A Endo-1,4-B-D-mannanase; 70.9 30 0.001 29.8 10.1 48 81-128 42-110 (344)
149 2jbm_A Nicotinate-nucleotide p 70.7 5.9 0.0002 35.2 5.5 50 177-236 226-275 (299)
150 3mfq_A TROA, high-affinity zin 70.6 9.6 0.00033 33.2 6.8 79 143-232 147-244 (282)
151 1egz_A Endoglucanase Z, EGZ, C 70.0 21 0.00071 30.4 8.8 118 78-212 41-168 (291)
152 2hsa_B 12-oxophytodienoate red 69.0 2.9 0.0001 38.7 3.2 39 204-242 319-358 (402)
153 1dxe_A 2-dehydro-3-deoxy-galac 68.5 35 0.0012 29.1 9.9 127 81-237 33-180 (256)
154 3kru_A NADH:flavin oxidoreduct 67.2 3.8 0.00013 37.1 3.5 38 205-242 278-317 (343)
155 2y88_A Phosphoribosyl isomeras 67.0 5.9 0.0002 33.1 4.5 45 204-248 74-120 (244)
156 1vzw_A Phosphoribosyl isomeras 66.9 5.9 0.0002 33.2 4.5 45 204-248 75-121 (244)
157 1tvn_A Cellulase, endoglucanas 66.7 27 0.00092 29.8 8.8 53 78-130 41-101 (293)
158 3tqv_A Nicotinate-nucleotide p 66.7 5.1 0.00017 35.7 4.1 46 177-235 227-272 (287)
159 3gka_A N-ethylmaleimide reduct 66.7 4 0.00014 37.3 3.6 38 205-242 288-326 (361)
160 3gi1_A LBP, laminin-binding pr 66.6 49 0.0017 28.7 10.6 91 144-247 166-276 (286)
161 1toa_A Tromp-1, protein (perip 66.5 28 0.00094 30.8 9.0 74 144-228 182-276 (313)
162 3l0g_A Nicotinate-nucleotide p 66.2 5.6 0.00019 35.7 4.3 47 177-236 236-282 (300)
163 2i14_A Nicotinate-nucleotide p 65.9 4.8 0.00016 37.3 4.0 50 180-235 248-297 (395)
164 1jub_A Dihydroorotate dehydrog 65.3 3.3 0.00011 36.3 2.7 44 203-247 241-288 (311)
165 3ngf_A AP endonuclease, family 65.2 15 0.00053 30.7 6.8 82 106-189 91-175 (269)
166 2c0h_A Mannan endo-1,4-beta-ma 65.1 49 0.0017 28.5 10.4 49 80-128 50-111 (353)
167 4ab4_A Xenobiotic reductase B; 64.1 4.3 0.00015 37.1 3.2 38 205-242 280-318 (362)
168 3l5a_A NADH/flavin oxidoreduct 64.1 5.4 0.00019 37.1 4.0 49 185-243 307-357 (419)
169 3pzt_A Endoglucanase; alpha/be 62.9 79 0.0027 27.7 11.4 128 73-213 66-201 (327)
170 3iix_A Biotin synthetase, puta 62.7 76 0.0026 27.5 12.9 130 81-231 145-291 (348)
171 4fxs_A Inosine-5'-monophosphat 62.6 29 0.001 32.7 8.9 33 204-237 334-367 (496)
172 1vjz_A Endoglucanase; TM1752, 62.5 46 0.0016 28.9 9.7 55 74-128 35-97 (341)
173 3aty_A Tcoye, prostaglandin F2 61.9 4 0.00014 37.5 2.6 39 204-242 307-346 (379)
174 3cx3_A Lipoprotein; zinc-bindi 61.7 78 0.0027 27.2 11.0 91 144-247 164-274 (284)
175 2hk0_A D-psicose 3-epimerase; 61.1 17 0.00058 31.1 6.4 82 107-189 106-193 (309)
176 2i1o_A Nicotinate phosphoribos 61.0 8.1 0.00028 35.8 4.5 51 180-235 250-300 (398)
177 1eep_A Inosine 5'-monophosphat 61.0 61 0.0021 29.3 10.5 33 204-237 256-289 (404)
178 2prs_A High-affinity zinc upta 60.9 44 0.0015 28.8 9.1 73 143-228 160-248 (284)
179 1hjs_A Beta-1,4-galactanase; 4 60.8 85 0.0029 27.7 11.2 48 80-128 32-80 (332)
180 1w8s_A FBP aldolase, fructose- 60.7 5.4 0.00018 34.6 3.1 187 16-247 39-246 (263)
181 1twd_A Copper homeostasis prot 60.3 5.2 0.00018 35.1 2.9 154 42-234 36-199 (256)
182 2y8k_A Arabinoxylanase, carboh 60.3 54 0.0019 30.5 10.3 124 75-211 39-180 (491)
183 3gnn_A Nicotinate-nucleotide p 60.2 13 0.00044 33.2 5.6 49 177-238 238-286 (298)
184 1k77_A EC1530, hypothetical pr 60.1 21 0.00071 29.4 6.6 83 106-189 83-168 (260)
185 3dx5_A Uncharacterized protein 59.8 21 0.00071 29.9 6.7 79 107-189 83-162 (286)
186 2yxb_A Coenzyme B12-dependent 59.6 11 0.00037 30.2 4.5 53 177-238 81-133 (161)
187 1icp_A OPR1, 12-oxophytodienoa 59.4 4.7 0.00016 36.9 2.6 39 204-242 301-340 (376)
188 1ccw_A Protein (glutamate muta 59.4 8 0.00027 30.0 3.6 63 176-246 65-132 (137)
189 2qw5_A Xylose isomerase-like T 58.8 16 0.00053 31.8 5.9 20 108-127 109-128 (335)
190 3paj_A Nicotinate-nucleotide p 58.6 9.4 0.00032 34.5 4.4 47 177-236 260-306 (320)
191 1zlp_A PSR132, petal death pro 58.4 24 0.00083 31.7 7.1 63 37-103 202-265 (318)
192 3qho_A Endoglucanase, 458AA lo 57.2 57 0.002 30.4 9.8 124 80-213 89-255 (458)
193 1gte_A Dihydropyrimidine dehyd 57.0 59 0.002 33.4 10.6 43 204-247 787-833 (1025)
194 2zvr_A Uncharacterized protein 56.9 22 0.00076 29.9 6.4 79 107-189 112-192 (290)
195 3cqj_A L-ribulose-5-phosphate 56.8 15 0.00051 31.1 5.3 79 107-189 107-186 (295)
196 1pq4_A Periplasmic binding pro 56.4 29 0.00099 30.2 7.2 88 144-246 177-278 (291)
197 3kts_A Glycerol uptake operon 56.3 13 0.00043 31.2 4.5 147 38-237 32-183 (192)
198 2w61_A GAS2P, glycolipid-ancho 56.0 95 0.0033 29.9 11.3 119 81-212 93-216 (555)
199 7a3h_A Endoglucanase; hydrolas 54.8 64 0.0022 27.7 9.2 133 75-219 43-183 (303)
200 2e6f_A Dihydroorotate dehydrog 54.4 8.9 0.0003 33.5 3.5 43 204-247 244-290 (314)
201 3pzg_A Mannan endo-1,4-beta-ma 54.4 82 0.0028 28.7 10.2 72 58-130 25-122 (383)
202 4a29_A Engineered retro-aldol 53.9 23 0.00079 31.0 6.0 116 85-238 123-238 (258)
203 1x1o_A Nicotinate-nucleotide p 53.9 17 0.00058 32.1 5.2 54 161-236 218-271 (286)
204 3tva_A Xylose isomerase domain 53.4 39 0.0013 28.3 7.4 21 107-127 101-121 (290)
205 2cw6_A Hydroxymethylglutaryl-C 53.0 1.1E+02 0.0038 26.4 13.0 160 13-193 22-198 (298)
206 3hmc_A Putative prophage lambd 53.0 85 0.0029 25.4 9.2 80 74-167 12-96 (192)
207 2g0w_A LMO2234 protein; putati 53.0 1E+02 0.0035 25.9 10.6 69 108-189 105-174 (296)
208 1i60_A IOLI protein; beta barr 52.2 46 0.0016 27.3 7.5 82 106-189 82-164 (278)
209 3qja_A IGPS, indole-3-glycerol 52.0 22 0.00076 30.9 5.6 45 204-248 113-158 (272)
210 2wag_A Lysozyme, putative; hyd 51.8 1E+02 0.0035 25.6 10.8 116 74-211 23-146 (220)
211 1jcn_A Inosine monophosphate d 51.4 48 0.0016 31.1 8.3 34 204-238 358-392 (514)
212 1eo1_A Hypothetical protein MT 51.1 25 0.00085 26.3 5.2 44 76-131 53-96 (124)
213 2qiw_A PEP phosphonomutase; st 50.2 37 0.0013 29.3 6.7 26 72-97 213-238 (255)
214 1geq_A Tryptophan synthase alp 49.7 17 0.00057 30.4 4.3 44 204-247 80-131 (248)
215 1xg4_A Probable methylisocitra 49.6 36 0.0012 30.1 6.7 60 37-102 180-242 (295)
216 1ceo_A Cellulase CELC; glycosy 49.6 92 0.0031 26.8 9.4 55 75-129 28-90 (343)
217 1h5y_A HISF; histidine biosynt 49.6 13 0.00045 30.6 3.6 44 204-247 77-122 (253)
218 2q02_A Putative cytoplasmic pr 49.3 97 0.0033 25.3 9.1 75 108-189 85-161 (272)
219 1vc4_A Indole-3-glycerol phosp 49.0 9.7 0.00033 32.8 2.8 43 204-246 106-148 (254)
220 1vrd_A Inosine-5'-monophosphat 48.8 81 0.0028 29.2 9.4 33 204-237 340-373 (494)
221 2o1e_A YCDH; alpha-beta protei 48.3 37 0.0013 29.9 6.6 74 144-230 177-266 (312)
222 3r2g_A Inosine 5'-monophosphat 48.2 1.6E+02 0.0054 26.7 12.0 32 206-238 201-233 (361)
223 3civ_A Endo-beta-1,4-mannanase 47.6 29 0.00099 31.2 5.8 56 71-126 46-115 (343)
224 3iv3_A Tagatose 1,6-diphosphat 47.1 13 0.00045 33.6 3.4 149 76-238 111-285 (332)
225 3kws_A Putative sugar isomeras 46.7 1.2E+02 0.0042 25.0 11.0 29 36-64 53-82 (287)
226 2x7v_A Probable endonuclease 4 46.1 30 0.001 28.7 5.4 79 107-189 88-167 (287)
227 3aal_A Probable endonuclease 4 45.7 44 0.0015 28.3 6.6 80 106-190 92-173 (303)
228 1uuq_A Mannosyl-oligosaccharid 45.0 1.2E+02 0.0041 27.5 9.8 49 81-129 68-132 (440)
229 3u0h_A Xylose isomerase domain 44.9 19 0.00064 29.9 3.9 79 108-189 84-169 (281)
230 1v5x_A PRA isomerase, phosphor 43.9 18 0.00061 30.2 3.6 50 171-236 128-177 (203)
231 3c2e_A Nicotinate-nucleotide p 43.6 13 0.00043 33.0 2.7 53 178-238 229-282 (294)
232 1ps9_A 2,4-dienoyl-COA reducta 43.5 12 0.00041 36.3 2.8 39 204-242 280-320 (671)
233 3tsm_A IGPS, indole-3-glycerol 43.2 45 0.0015 29.1 6.2 69 161-248 96-165 (272)
234 1fob_A Beta-1,4-galactanase; B 43.1 33 0.0011 30.4 5.4 49 79-128 31-80 (334)
235 3ohe_A Histidine triad (HIT) p 43.0 27 0.00092 27.1 4.3 29 167-195 107-135 (137)
236 2ww5_A LYTC autolysin, 1,4-bet 42.7 1.7E+02 0.0059 27.1 10.6 47 74-124 276-324 (468)
237 3tfx_A Orotidine 5'-phosphate 42.5 1.6E+02 0.0056 25.3 10.2 76 37-119 157-237 (259)
238 3aam_A Endonuclease IV, endoiv 41.8 91 0.0031 25.6 7.8 76 106-189 86-162 (270)
239 3fkr_A L-2-keto-3-deoxyarabona 41.6 30 0.001 30.5 4.8 55 173-235 52-112 (309)
240 1me8_A Inosine-5'-monophosphat 41.3 1.5E+02 0.005 27.8 9.9 55 178-237 331-385 (503)
241 1jfx_A 1,4-beta-N-acetylmurami 41.3 1.5E+02 0.005 24.3 10.6 118 74-211 12-140 (217)
242 2re2_A Uncharacterized protein 41.3 29 0.001 26.8 4.3 44 76-132 67-110 (136)
243 2f7f_A Nicotinate phosphoribos 41.1 28 0.00096 33.1 4.8 46 185-234 271-317 (494)
244 2ojp_A DHDPS, dihydrodipicolin 41.0 1.6E+02 0.0055 25.3 9.5 57 173-237 45-107 (292)
245 2qul_A D-tagatose 3-epimerase; 40.9 38 0.0013 28.1 5.3 80 108-189 88-175 (290)
246 2x8r_A Glycosyl hydrolase; pep 40.4 1.3E+02 0.0045 24.5 8.5 119 74-212 11-140 (210)
247 1rh9_A Endo-beta-mannanase; en 40.4 1.8E+02 0.0062 25.2 11.2 50 80-129 47-106 (373)
248 3ayr_A Endoglucanase; TIM barr 40.4 1.5E+02 0.005 26.3 9.4 56 75-130 62-125 (376)
249 3si9_A DHDPS, dihydrodipicolin 40.0 1.1E+02 0.0036 27.0 8.3 50 178-235 73-126 (315)
250 3t7v_A Methylornithine synthas 39.9 1E+02 0.0035 26.9 8.2 107 76-194 147-270 (350)
251 1rdu_A Conserved hypothetical 39.8 35 0.0012 25.1 4.4 44 76-131 50-93 (116)
252 3zen_D Fatty acid synthase; tr 39.7 54 0.0018 38.2 7.5 68 161-238 572-651 (3089)
253 3zwt_A Dihydroorotate dehydrog 38.5 27 0.00091 31.8 4.1 58 182-248 284-345 (367)
254 3qxb_A Putative xylose isomera 38.2 60 0.002 27.7 6.2 78 108-189 114-200 (316)
255 4gi5_A Quinone reductase; prot 38.0 69 0.0024 27.9 6.6 32 90-124 25-56 (280)
256 4e8d_A Glycosyl hydrolase, fam 36.9 32 0.0011 33.6 4.6 49 80-128 37-91 (595)
257 3i24_A HIT family hydrolase; s 36.4 36 0.0012 26.9 4.1 31 167-197 107-137 (149)
258 3ndz_A Endoglucanase D; cellot 36.3 1.7E+02 0.0059 25.6 9.1 58 74-131 41-106 (345)
259 1qap_A Quinolinic acid phospho 35.7 16 0.00054 32.4 2.1 47 177-236 237-283 (296)
260 1yx1_A Hypothetical protein PA 35.2 38 0.0013 28.1 4.3 28 36-63 38-68 (264)
261 4aaj_A N-(5'-phosphoribosyl)an 35.2 24 0.00083 30.0 3.1 49 171-235 156-204 (228)
262 3n9k_A Glucan 1,3-beta-glucosi 35.1 2.6E+02 0.0088 25.4 11.4 54 75-128 73-133 (399)
263 1f76_A Dihydroorotate dehydrog 34.7 31 0.001 30.4 3.8 43 203-246 288-334 (336)
264 3oix_A Putative dihydroorotate 34.0 21 0.00073 32.2 2.6 45 203-248 274-322 (345)
265 1nmo_A Hypothetical protein YB 34.0 17 0.00058 31.1 1.9 13 85-97 183-195 (247)
266 3vni_A Xylose isomerase domain 33.9 1.9E+02 0.0064 23.9 8.6 82 107-189 87-174 (294)
267 3cpr_A Dihydrodipicolinate syn 33.7 2.4E+02 0.008 24.5 9.8 57 173-237 60-122 (304)
268 1o94_A Tmadh, trimethylamine d 33.3 18 0.00062 35.6 2.2 39 204-242 291-331 (729)
269 1g01_A Endoglucanase; alpha/be 33.1 1.5E+02 0.0051 26.0 8.2 56 75-130 53-112 (364)
270 2yx6_A Hypothetical protein PH 33.1 62 0.0021 23.9 4.8 41 79-131 54-94 (121)
271 3cny_A Inositol catabolism pro 32.1 49 0.0017 27.6 4.6 23 106-128 88-110 (301)
272 1ur4_A Galactanase; hydrolase, 31.6 78 0.0027 29.1 6.1 50 79-128 52-109 (399)
273 3i65_A Dihydroorotate dehydrog 31.1 29 0.00099 32.3 3.1 46 203-248 344-392 (415)
274 3obe_A Sugar phosphate isomera 31.0 60 0.0021 27.8 5.0 61 106-169 112-172 (305)
275 3a5f_A Dihydrodipicolinate syn 30.8 2E+02 0.0067 24.8 8.4 52 177-236 51-106 (291)
276 3qc0_A Sugar isomerase; TIM ba 30.5 28 0.00097 28.7 2.7 20 108-127 83-102 (275)
277 2cks_A Endoglucanase E-5; carb 30.5 2.5E+02 0.0085 23.7 11.0 49 81-129 48-101 (306)
278 3i4s_A Histidine triad protein 30.2 50 0.0017 26.0 4.0 29 166-194 111-139 (149)
279 3ih1_A Methylisocitrate lyase; 30.0 95 0.0033 27.5 6.2 29 75-103 223-251 (305)
280 3pzy_A MOG; ssgcid, seattle st 29.8 65 0.0022 25.6 4.7 62 77-146 29-90 (164)
281 3thd_A Beta-galactosidase; TIM 29.4 50 0.0017 32.6 4.5 50 80-129 45-100 (654)
282 3p6l_A Sugar phosphate isomera 29.3 1.7E+02 0.0057 23.8 7.4 18 110-127 93-110 (262)
283 3q6z_A Poly [ADP-ribose] polym 29.3 55 0.0019 27.5 4.3 51 142-195 130-182 (214)
284 2ztj_A Homocitrate synthase; ( 29.2 2.3E+02 0.0079 25.5 8.8 16 177-192 170-185 (382)
285 3qxb_A Putative xylose isomera 28.8 2.5E+02 0.0086 23.6 8.7 69 58-126 18-88 (316)
286 4ef8_A Dihydroorotate dehydrog 28.7 43 0.0015 30.3 3.8 44 204-248 277-324 (354)
287 3kws_A Putative sugar isomeras 28.5 2.5E+02 0.0084 23.1 10.4 107 81-189 70-188 (287)
288 3d3a_A Beta-galactosidase; pro 28.2 46 0.0016 32.5 4.1 49 81-129 43-97 (612)
289 1qtw_A Endonuclease IV; DNA re 28.1 2.4E+02 0.0083 22.9 10.3 132 80-225 17-168 (285)
290 1qwg_A PSL synthase;, (2R)-pho 27.3 2.7E+02 0.0094 24.0 8.5 70 81-154 91-160 (251)
291 1o13_A Probable NIFB protein; 27.1 80 0.0027 24.2 4.6 41 79-131 67-107 (136)
292 1ydn_A Hydroxymethylglutaryl-C 26.9 2.9E+02 0.01 23.5 13.3 159 14-193 22-197 (295)
293 3vni_A Xylose isomerase domain 26.5 2.7E+02 0.0092 22.9 11.6 67 61-130 3-69 (294)
294 3k30_A Histamine dehydrogenase 26.4 26 0.00088 34.1 1.9 39 204-242 294-334 (690)
295 3fn9_A Putative beta-galactosi 26.4 3.9E+02 0.013 26.1 10.5 108 81-213 324-434 (692)
296 3fij_A LIN1909 protein; 11172J 26.3 1.6E+02 0.0055 24.6 6.8 45 21-72 31-78 (254)
297 3b4u_A Dihydrodipicolinate syn 26.3 2E+02 0.0069 24.7 7.7 50 177-234 53-106 (294)
298 2ze3_A DFA0005; organic waste 26.3 1.4E+02 0.0048 25.9 6.6 57 37-103 181-240 (275)
299 2ktr_A Sequestosome-1; autopha 26.2 20 0.00069 27.7 0.9 29 68-98 4-32 (117)
300 4a3u_A NCR, NADH\:flavin oxido 26.2 27 0.00093 31.4 1.9 40 204-243 286-326 (358)
301 1req_A Methylmalonyl-COA mutas 25.6 64 0.0022 32.3 4.6 53 177-238 659-711 (727)
302 2ash_A Queuine tRNA-ribosyltra 25.6 1.7E+02 0.0057 26.9 7.1 75 173-248 157-240 (381)
303 1xla_A D-xylose isomerase; iso 25.4 31 0.0011 31.0 2.2 20 108-127 116-135 (394)
304 1nrp_R Receptor based peptide 25.4 16 0.00056 20.2 0.2 7 164-170 14-20 (26)
305 2nzl_A Hydroxyacid oxidase 1; 25.3 46 0.0016 30.5 3.3 36 203-238 306-341 (392)
306 3eoo_A Methylisocitrate lyase; 25.2 1.5E+02 0.0052 26.1 6.6 62 37-102 184-246 (298)
307 1p0k_A Isopentenyl-diphosphate 25.1 31 0.0011 30.6 2.1 34 204-238 251-285 (349)
308 3lmz_A Putative sugar isomeras 24.7 2.1E+02 0.0072 23.2 7.2 21 107-127 88-108 (257)
309 3k4o_A Isopentenyl phosphate k 23.8 2.4E+02 0.0081 24.0 7.5 42 112-153 134-177 (266)
310 1nsj_A PRAI, phosphoribosyl an 23.6 38 0.0013 28.2 2.2 51 171-236 133-183 (205)
311 1whs_A Serine carboxypeptidase 23.4 50 0.0017 28.5 3.0 60 179-239 122-188 (255)
312 2pjk_A 178AA long hypothetical 23.4 1.1E+02 0.0037 24.6 5.0 63 76-145 41-104 (178)
313 3vup_A Beta-1,4-mannanase; TIM 23.4 3E+02 0.01 22.3 9.0 48 81-128 48-110 (351)
314 2nli_A Lactate oxidase; flavoe 23.3 51 0.0018 29.8 3.2 35 204-238 284-318 (368)
315 3ru6_A Orotidine 5'-phosphate 23.3 3.8E+02 0.013 23.5 9.7 75 37-118 171-250 (303)
316 1nro_R Receptor based peptide 23.2 19 0.00064 20.1 0.1 7 164-170 14-20 (27)
317 1tg7_A Beta-galactosidase; TIM 23.1 53 0.0018 33.9 3.5 49 81-129 42-96 (971)
318 2xij_A Methylmalonyl-COA mutas 23.0 75 0.0026 31.9 4.6 53 177-238 667-719 (762)
319 1nvm_A HOA, 4-hydroxy-2-oxoval 23.0 3.6E+02 0.012 23.7 8.8 126 80-233 98-229 (345)
320 3vnd_A TSA, tryptophan synthas 23.0 94 0.0032 26.9 4.7 44 204-247 95-146 (267)
321 3lmz_A Putative sugar isomeras 22.9 2.6E+02 0.0089 22.6 7.4 63 58-125 16-78 (257)
322 2bf9_A Pancreatic hormone; tur 22.6 92 0.0032 19.0 3.2 23 173-195 8-30 (36)
323 1cpy_A Serine carboxypeptidase 22.4 1.2E+02 0.0041 27.9 5.6 69 170-239 96-181 (421)
324 1zfj_A Inosine monophosphate d 22.2 81 0.0028 29.1 4.5 35 204-238 336-370 (491)
325 3fa4_A 2,3-dimethylmalate lyas 22.2 2E+02 0.0068 25.4 6.8 78 37-122 183-262 (302)
326 4dpp_A DHDPS 2, dihydrodipicol 22.2 4.3E+02 0.015 23.8 9.2 23 110-132 82-104 (360)
327 3cf4_G Acetyl-COA decarboxylas 22.1 50 0.0017 26.1 2.6 44 164-218 7-50 (170)
328 3rfq_A Pterin-4-alpha-carbinol 22.0 1.1E+02 0.0037 25.0 4.7 63 76-145 50-112 (185)
329 2czd_A Orotidine 5'-phosphate 21.3 88 0.003 25.4 4.0 38 207-245 158-198 (208)
330 2fb6_A Conserved hypothetical 21.2 48 0.0016 25.0 2.2 38 89-129 42-79 (117)
331 1kbi_A Cytochrome B2, L-LCR; f 21.2 43 0.0015 31.9 2.3 37 202-238 401-437 (511)
332 2qap_A Fructose-1,6-bisphospha 21.1 3.4E+02 0.011 25.0 8.1 139 81-228 164-320 (391)
333 1mkz_A Molybdenum cofactor bio 21.0 1.5E+02 0.0051 23.5 5.3 48 78-131 31-79 (172)
334 3bga_A Beta-galactosidase; NYS 20.9 5.9E+02 0.02 26.2 10.9 106 82-212 379-492 (1010)
335 3m0z_A Putative aldolase; MCSG 20.9 2.2E+02 0.0075 24.6 6.4 93 80-193 150-248 (249)
336 2vws_A YFAU, 2-keto-3-deoxy su 20.9 47 0.0016 28.5 2.3 125 81-237 32-180 (267)
337 2qr6_A IMP dehydrogenase/GMP r 20.8 95 0.0033 27.9 4.5 56 177-238 254-311 (393)
338 3m6y_A 4-hydroxy-2-oxoglutarat 20.8 4.2E+02 0.014 23.1 10.4 93 81-194 174-272 (275)
339 4af0_A Inosine-5'-monophosphat 20.3 2.2E+02 0.0074 27.6 7.0 123 81-234 286-414 (556)
340 2wje_A CPS4B, tyrosine-protein 20.2 94 0.0032 25.8 4.1 36 83-123 128-163 (247)
341 2zds_A Putative DNA-binding pr 20.2 1.4E+02 0.0047 25.3 5.3 20 108-127 111-130 (340)
342 3b8i_A PA4872 oxaloacetate dec 20.0 2.1E+02 0.0071 25.0 6.4 31 73-103 212-242 (287)
No 1
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=100.00 E-value=4.5e-99 Score=676.75 Aligned_cols=250 Identities=41% Similarity=0.603 Sum_probs=233.6
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCC-CCceeEEEcCccccHHHHHhhcC-C--CceEeeecccccCCcccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPS-SDVVEVVVSPPFVFLGLVKSSLR-P--GFHVAAQNCWVKKGGAFT 76 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~-~~~~~v~i~Pp~~~L~~~~~~~~-~--~i~vgAQn~~~~~~Ga~T 76 (251)
|+|||||+||||||++.+++.+|++.+.....+. ..+++|+|||||++|..+++.+. + +|.+||||||+.++||||
T Consensus 1 m~rk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfT 80 (267)
T 3ta6_A 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYT 80 (267)
T ss_dssp --CCCEEEEECCBCCCHHHHHHHHHHHHHHSCGGGGGTCEEEEECCGGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCT
T ss_pred CCCCcEEEEEhhhccCHHHHHHHHHHHHHhccccccCCceEEEECCHHHHHHHHHHhcCCCCceEEEecccCCCCCCCcc
Confidence 7899999999999999999999999887642211 12689999999999999998876 3 499999999999999999
Q ss_pred ccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 77 GEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 77 GeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+.+|++++
T Consensus 81 GEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCvGEtleeReag~t~~vv~~Ql~~~l~~l~ 160 (267)
T 3ta6_A 81 GDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLL 160 (267)
T ss_dssp TCCCHHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred CcccHHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred --CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcC
Q 025540 157 --SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGG 234 (251)
Q Consensus 157 --~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~ 234 (251)
++++++||||||||||||++||||++|++|++||++|.++|+.+.++++||||||||||+|+.+|++++||||+||||
T Consensus 161 ~~~~~~vvIAYEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~el~~~~diDG~LVGg 240 (267)
T 3ta6_A 161 AEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGG 240 (267)
T ss_dssp HHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEECG
T ss_pred HHHhCCEEEEECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcCHhHHHHHhcCCCCCEEEech
Confidence 478999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred ccCc-hHHHHHHHHHhc
Q 025540 235 ASLK-PEFIDIIKSAEL 250 (251)
Q Consensus 235 asl~-~~F~~Ii~~~~~ 250 (251)
|||+ ++|.+||+.+.+
T Consensus 241 ASL~~~~F~~Ii~~~~~ 257 (267)
T 3ta6_A 241 ASLDGEHFATLAAIAAG 257 (267)
T ss_dssp GGGSHHHHHHHHHHHHC
T ss_pred HhcCHHHHHHHHHHHhc
Confidence 9999 789999997653
No 2
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=2.9e-98 Score=665.94 Aligned_cols=247 Identities=47% Similarity=0.749 Sum_probs=233.1
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
|||||||+||||||++.+++.+|++.+.... ++..+++++|||||++|..+.+.+.+++.+||||||+.++||||||||
T Consensus 1 mmr~~~i~gNwKmn~~~~~~~~l~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS 79 (248)
T 1o5x_A 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLD-FDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVS 79 (248)
T ss_dssp --CCEEEEEECCBCCCHHHHHHHHHHHHTSC-CCTTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSCSBSCTTCCC
T ss_pred CCCCCEEEEecCcccCHHHHHHHHHHHHhhc-ccccCceEEEeCcHHHHHHHHHHhccCCeEEeccCCCCCCCCcCCcCC
Confidence 8899999999999999999999999987632 223479999999999999998887667999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++++++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (248)
T 1o5x_A 80 AEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDN 159 (248)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTTS
T ss_pred HHHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHHhhhhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998866899
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCchH
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~~ 240 (251)
++||||||||||||++||||++|++|++||++|.++|+.++++++||||||||||+|+.+++.++||||+|||||||+++
T Consensus 160 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~~~ 239 (248)
T 1o5x_A 160 VILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSTT
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHHHH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999977
Q ss_pred HHHHHHHH
Q 025540 241 FIDIIKSA 248 (251)
Q Consensus 241 F~~Ii~~~ 248 (251)
|.+|++.+
T Consensus 240 F~~ii~~~ 247 (248)
T 1o5x_A 240 FVDIIKSA 247 (248)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99999853
No 3
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=100.00 E-value=2.3e-98 Score=673.35 Aligned_cols=243 Identities=44% Similarity=0.643 Sum_probs=230.0
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||||||+||||||++.+++.+|++.+.........+++|+|||||++|..+.+.+. ++|.+||||||+.++||||||||
T Consensus 25 Mrk~~i~gNWKMn~t~~~~~~l~~~l~~~~~~~~~~veVvV~PP~~~L~~v~~~~~~~~i~vgAQN~~~~~~GAfTGEIS 104 (272)
T 4g1k_A 25 QRIKRVIGNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDVSAHEQGAYTGEVA 104 (272)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHHHTTSCTTEEEEEECCGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHHHhccccccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccCCCCCCCCcCcCC
Confidence 59999999999999999999999988764212235799999999999999999887 78999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 105 a~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGEtleeReag~t~~vv~~Ql~~~l~~~~~~~~ 184 (272)
T 4g1k_A 105 AGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDAVLAVLSPDEA 184 (272)
T ss_dssp HHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhCCCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999886 47
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||+++.++| ++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 185 ~~vVIAYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~----a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgASL~ 260 (272)
T 4g1k_A 185 ARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKG----AGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLK 260 (272)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHT----CTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS
T ss_pred CCEEEEECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhh----cCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcC
Confidence 899999999999999999999999999999999999988 6789999999999999999999999999999999999
Q ss_pred -hHHHHHHHHH
Q 025540 239 -PEFIDIIKSA 248 (251)
Q Consensus 239 -~~F~~Ii~~~ 248 (251)
++|.+||+.+
T Consensus 261 ~~~F~~Ii~~~ 271 (272)
T 4g1k_A 261 SGDFLAICRAA 271 (272)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhhc
Confidence 7999999764
No 4
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=100.00 E-value=3.4e-98 Score=665.80 Aligned_cols=246 Identities=54% Similarity=0.918 Sum_probs=230.6
Q ss_pred CC-CceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccc
Q 025540 1 MG-RKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEI 79 (251)
Q Consensus 1 m~-r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGei 79 (251)
|| |||||+||||||++.+++.+|++.+..... ..+++++|||||++|..+.+.+.+++.+||||||+.++|||||||
T Consensus 1 mm~r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~--~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEi 78 (249)
T 3th6_A 1 MAARRFCVGGNWKMHGSKNSIRDICNTLKGASL--DPNVEVIVACPAPYLDYCRSLLPPSVALAAQNCYKVEQGAFTGEI 78 (249)
T ss_dssp --CCCCEEEEECCBCCCHHHHHHHHHHHHTSCC--CTTSEEEEEECGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCeEEEEEhhhccCHHHHHHHHHHHHhhcc--cCCceEEEeCcHHHHHHHHHHhccCCEEEeeecCCccCCCccccc
Confidence 55 899999999999999999999998876432 247999999999999999988777899999999999999999999
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+++++++++
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 158 (249)
T 3th6_A 79 SPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWS 158 (249)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTCHHHHHHHHHHHHHTTCSCGG
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887788
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCch
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~ 239 (251)
+++||||||||||||++|||+++|++|++||++|.+.|+.+.++++||||||||||+|+.+++.++||||+|||||||++
T Consensus 159 ~~vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 159 KVVIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp GEEEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred CEEEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999998
Q ss_pred HHHHHHHHH
Q 025540 240 EFIDIIKSA 248 (251)
Q Consensus 240 ~F~~Ii~~~ 248 (251)
+|.+||+..
T Consensus 239 ~F~~ii~~~ 247 (249)
T 3th6_A 239 EFVQIINAM 247 (249)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHhhc
Confidence 899999753
No 5
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.8e-98 Score=669.56 Aligned_cols=245 Identities=48% Similarity=0.795 Sum_probs=234.4
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC----CCceEeeecccccCCcccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR----PGFHVAAQNCWVKKGGAFT 76 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~----~~i~vgAQn~~~~~~Ga~T 76 (251)
|+|||||+||||||++.+++.+|++.+.... ..+++++|||||++|..+.+.+. ++|.+||||||+.++||||
T Consensus 22 m~rk~~i~gNWKmn~t~~~~~~l~~~l~~~~---~~~vevvv~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GAfT 98 (271)
T 3krs_A 22 MSRKYFVGGNFKCNGTKESLKTLIDSFKQVE---SSNSEVYVFPTSLHISLVKEFFGNDHPGVFKIGSQNISCTGNGAFT 98 (271)
T ss_dssp -CCCCEEEEECCBCCCHHHHHHHHHHHTTCC---CCSSEEEEECCGGGHHHHHHHHCSSSCSCEEECBSCCCSSCSBSCT
T ss_pred cCCCeEEEEEhhhCcCHHHHHHHHHHHHhcc---cCCceEEEECcHHHHHHHHHHHhhccCCCceEEecccccccCCCcc
Confidence 5689999999999999999999999987743 25799999999999999998883 6899999999999999999
Q ss_pred ccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 77 GEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 77 GeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
|||||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|+++.
T Consensus 99 GEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~~l~~v~ 178 (271)
T 3krs_A 99 GEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDVS 178 (271)
T ss_dssp TCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred ccccHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHHHHhchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
++++++||||||||||||++||||+++++|++||++++++|+.+.++++||||||||||+|+.+|+.++||||+||||||
T Consensus 179 ~~~~~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgAS 258 (271)
T 3krs_A 179 DLSNLVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGAS 258 (271)
T ss_dssp CCTTEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGG
T ss_pred hhcCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHh
Confidence 78999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CchHHHHHHHHH
Q 025540 237 LKPEFIDIIKSA 248 (251)
Q Consensus 237 l~~~F~~Ii~~~ 248 (251)
||++|.+||+..
T Consensus 259 L~~~F~~Ii~~~ 270 (271)
T 3krs_A 259 LKPTFAKIIESA 270 (271)
T ss_dssp GSTTHHHHHHHT
T ss_pred hhHHHHHHHHhc
Confidence 999999999864
No 6
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=100.00 E-value=8.2e-98 Score=665.40 Aligned_cols=247 Identities=51% Similarity=0.865 Sum_probs=234.5
Q ss_pred CCceEEEEecccC-CCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCN-GTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn-~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+|||||| ++.+++.+|++.+..... ..+++++|||||++|..+.+.+.+++.+||||||+.++||||||||
T Consensus 4 mr~~~i~gNWKmn~~~~~~~~~l~~~l~~~~~--~~~~ev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS 81 (255)
T 3qst_A 4 MRTFFVGGNWKANPKTVQEAEKLVEMLNGAKV--EGNVEVVVAAPFVFLPTLQQKLRKDWKVSAENVFTKPNGAFTGEVT 81 (255)
T ss_dssp -CCCEEEEECCSCCSSHHHHHHHHHHHHTCCC--CSSCEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSSSCTTCCC
T ss_pred CCCcEEEEEhhcccCCHHHHHHHHHHHHhhcc--cCCceEEEeCCHHHHHHHHHHhccCCeEEecccCCCCCCCccCccC
Confidence 6999999999999 999999999999876432 2459999999999999999887778999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+.+|++++ ++
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 161 (255)
T 3qst_A 82 VPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKW 161 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHGGGSCTTCG
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHHHHccCCHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999875 57
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||++|.++|+.+.++++|||||||||++|+.+|+.++||||+|||||||+
T Consensus 162 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 241 (255)
T 3qst_A 162 DDVVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE 241 (255)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS
T ss_pred CCEEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh
Confidence 89999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhc
Q 025540 239 PEFIDIIKSAEL 250 (251)
Q Consensus 239 ~~F~~Ii~~~~~ 250 (251)
++|.+||+.+..
T Consensus 242 ~~F~~Ii~~~~~ 253 (255)
T 3qst_A 242 AGFINIVNSNVH 253 (255)
T ss_dssp TTHHHHHGGGGG
T ss_pred HHHHHHHHHHhh
Confidence 999999987653
No 7
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=100.00 E-value=3.2e-98 Score=672.84 Aligned_cols=245 Identities=36% Similarity=0.583 Sum_probs=221.4
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCC-ceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSD-VVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEI 79 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~-~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGei 79 (251)
||||||+||||||++.+++.+|++.+..... +.. +++|+|||||++|..+.+.+. ++|.+||||||+.++|||||||
T Consensus 25 MRk~~i~gNWKMn~~~~~~~~l~~~l~~~~~-~~~~~vevvv~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEI 103 (275)
T 3kxq_A 25 NIRPFIAGNWKMNGTGESLGELRAIAAGISS-DLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTGDI 103 (275)
T ss_dssp -CCCEEEEECCBCCCGGGHHHHHHHHHHHC-----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHHHhhcc-cccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccccccCCCccCcC
Confidence 6899999999999999999999999877432 223 799999999999999999887 7899999999999999999999
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhc-cCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR-VSSW 158 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~-i~~~ 158 (251)
||+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+.+|++ .++
T Consensus 104 S~~mLkd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~~l~~~~~~- 182 (275)
T 3kxq_A 104 SAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATA- 182 (275)
T ss_dssp CHHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCCT-
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHHHHcCCccc-
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999985 224
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||++|.++|+ +.++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 183 ~~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~-~~a~~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgASL~ 261 (275)
T 3kxq_A 183 ENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFG-DEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLK 261 (275)
T ss_dssp TTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHH-HHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhh-hhcccceEEEcCCcCHhHHHHHHcCCccceEEeehhhcC
Confidence 7899999999999999999999999999999999999986 678999999999999999999999999999999999999
Q ss_pred -hHHHHHHHHHh
Q 025540 239 -PEFIDIIKSAE 249 (251)
Q Consensus 239 -~~F~~Ii~~~~ 249 (251)
++|.+||+.+.
T Consensus 262 ~~~F~~Ii~~~~ 273 (275)
T 3kxq_A 262 AIDFLTICDVYR 273 (275)
T ss_dssp HHHHHHHHGGGG
T ss_pred HHHHHHHHHHHh
Confidence 79999998764
No 8
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=1.4e-97 Score=664.52 Aligned_cols=246 Identities=56% Similarity=0.920 Sum_probs=233.9
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
|||||||+||||||++.+++.+|++.+..... ..+++++|||||++|..+.+.+...|.+||||||+.++||||||||
T Consensus 1 m~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~--~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS 78 (259)
T 2i9e_A 1 MARKFVVGGNWKMNGDKKQINEIIGFLKSGPL--NQDTEVVVGVPAIYLELVRTCVPASIGVAAQNCYKVPKGAFTGEIS 78 (259)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCC--CTTEEEEEEECGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCcEEEEecccccCHHHHHHHHHHHhhhcc--cCCeeEEEeCCHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCccC
Confidence 88999999999999999999999999876322 2579999999999999999888646999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||++++++++++++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (259)
T 2i9e_A 79 PAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSN 158 (259)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCTT
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988866899
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P 239 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~ 239 (251)
++||||||||||||++||||+++++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+|||||||+ +
T Consensus 159 ~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 238 (259)
T 2i9e_A 159 VVIAYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPE 238 (259)
T ss_dssp EEEEECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred EEEEEcCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChH
Confidence 999999999999999999999999999999999999998888899999999999999999999999999999999999 7
Q ss_pred HHHHHHHHH
Q 025540 240 EFIDIIKSA 248 (251)
Q Consensus 240 ~F~~Ii~~~ 248 (251)
+|.+|++.+
T Consensus 239 ~F~~Ii~~~ 247 (259)
T 2i9e_A 239 FVDIINARQ 247 (259)
T ss_dssp HHHHHTTTC
T ss_pred HHHHHHHHH
Confidence 999999864
No 9
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=100.00 E-value=9.8e-98 Score=664.58 Aligned_cols=245 Identities=42% Similarity=0.684 Sum_probs=231.4
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhc---C-CCceEeeecccccCCccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSL---R-PGFHVAAQNCWVKKGGAFTG 77 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~---~-~~i~vgAQn~~~~~~Ga~TG 77 (251)
||||+|+||||||++.+++.+|++.+ .. .++..+++++|||||++|..+.+.+ . +++.+||||||+.++|||||
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l-~~-~~~~~~~ev~v~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TG 79 (254)
T 3m9y_A 2 MRTPIIAGNWKMNKTVQEAKDFVNAL-PT-LPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTG 79 (254)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHC-CC-CCCTTTCEEEEEECHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTT
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHH-Hh-ccccCCceEEEECCHHHHHHHHHHHhhcCCCcceEEecccccccCCCccC
Confidence 59999999999999999999999998 43 3333579999999999999999988 6 78999999999999999999
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC-
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS- 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~- 156 (251)
|||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++
T Consensus 80 EiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~ 159 (254)
T 3m9y_A 80 ETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSE 159 (254)
T ss_dssp CCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCH
T ss_pred cCCHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCc
Q 025540 157 -SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 157 -~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~a 235 (251)
++++++||||||||||||++|||+++|++|++||+++.+.|+.++++++||||||||||+|+.+|++++||||+|||||
T Consensus 160 ~~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgA 239 (254)
T 3m9y_A 160 DQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGA 239 (254)
T ss_dssp HHHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEESGG
T ss_pred HHhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEeeHH
Confidence 4678999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cCc-hHHHHHHHHH
Q 025540 236 SLK-PEFIDIIKSA 248 (251)
Q Consensus 236 sl~-~~F~~Ii~~~ 248 (251)
||+ ++|.+||+.+
T Consensus 240 SL~~~~F~~Ii~~~ 253 (254)
T 3m9y_A 240 SLKVEDFVQLLEGA 253 (254)
T ss_dssp GSSHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHhc
Confidence 999 7999999864
No 10
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=2.3e-97 Score=660.12 Aligned_cols=244 Identities=58% Similarity=0.939 Sum_probs=231.7
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
|||+|||+||||||++.+++.+|++.+..... + .+++++|||||++|..+.+.+...+.+||||||+.++||||||||
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~-~-~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS 79 (248)
T 1r2r_A 2 PSRKFFVGGNWKMNGRKKNLGELITTLNAAKV-P-ADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEIS 79 (248)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCC-C-TTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCCEEEEeCCcccCHHHHHHHHHHHHhhcc-c-cCceEEEeCcHHHHHHHHHHhhCCceEEeccCCCCCCCCccCccC
Confidence 67999999999999999999999999876432 2 579999999999999999988733999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++++++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (248)
T 1r2r_A 80 PGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSK 159 (248)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGGG
T ss_pred HHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998866889
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P 239 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~ 239 (251)
++||||||||||||++||||+++++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+|||||||+ +
T Consensus 160 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 239 (248)
T 1r2r_A 160 VVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE 239 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred eEEEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhChH
Confidence 999999999999999999999999999999999999998888899999999999999999999999999999999999 7
Q ss_pred HHHHHHH
Q 025540 240 EFIDIIK 246 (251)
Q Consensus 240 ~F~~Ii~ 246 (251)
+|.+|++
T Consensus 240 ~F~~ii~ 246 (248)
T 1r2r_A 240 FVDIINA 246 (248)
T ss_dssp HHHHHTS
T ss_pred HHHHHHh
Confidence 8999985
No 11
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=2.2e-97 Score=659.65 Aligned_cols=245 Identities=49% Similarity=0.827 Sum_probs=233.4
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||||||+||||||++.+++.+|++.+.... ++ .+++++|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~-~~-~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS 78 (247)
T 1ney_A 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTAS-IP-ENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENS 78 (247)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSC-CC-TTEEEEEECCGGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEECCcccCHHHHHHHHHHHHhhc-cc-cCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCCCCccCccC
Confidence 499999999999999999999999987633 22 5799999999999999999887 78999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++++++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (247)
T 1ney_A 79 VDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTN 158 (247)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCCTT
T ss_pred HHHHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988866899
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCchH
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~~ 240 (251)
++||||||||||||++||||++|++|++||++|.++|+.++++++|||||||||++|+.+++.++||||+|||||||+++
T Consensus 159 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~~~ 238 (247)
T 1ney_A 159 VVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 238 (247)
T ss_dssp EEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGSTH
T ss_pred EEEEECChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHHHH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999977
Q ss_pred HHHHHHHH
Q 025540 241 FIDIIKSA 248 (251)
Q Consensus 241 F~~Ii~~~ 248 (251)
|.+|++..
T Consensus 239 F~~Ii~~~ 246 (247)
T 1ney_A 239 FVDIINSR 246 (247)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHhc
Confidence 99999753
No 12
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=1.1e-97 Score=663.82 Aligned_cols=247 Identities=47% Similarity=0.689 Sum_probs=232.8
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCccccccc
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEI 79 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGei 79 (251)
|||||||+||||||++.+++.+|++.+.... +...+++++|||||++|..+.+.+. +++.+||||||+.++|||||||
T Consensus 1 ~Mrk~~i~gNwKmn~~~~~~~~l~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEi 79 (255)
T 1b9b_A 1 ITRKLILAGNWKMHKTISEAKKFVSLLVNEL-HDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEI 79 (255)
T ss_dssp -CCSCEEEEECCBCCCHHHHHHHHHHHHHHT-SSCCSSEEEEECCGGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCEEEEeCCcCcCHHHHHHHHHHHHhhc-ccccCeeEEEeCcHHHHHHHHHHhcCCCceEeeccCCCCCCCCccCcC
Confidence 6799999999999999999999999886532 2224699999999999999999887 7899999999999999999999
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--C
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--S 157 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~ 157 (251)
|++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ +
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 159 (255)
T 1b9b_A 80 SPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEE 159 (255)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886 3
Q ss_pred CCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccC
Q 025540 158 WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 158 ~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
+++++||||||||||||++||||++|++|++||++|.++|+.++++++||||||||||+|+.+|++++||||+|||||||
T Consensus 160 ~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL 239 (255)
T 1b9b_A 160 AKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASL 239 (255)
T ss_dssp HTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGT
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhh
Confidence 68999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred c-h--HHHHHHHHH
Q 025540 238 K-P--EFIDIIKSA 248 (251)
Q Consensus 238 ~-~--~F~~Ii~~~ 248 (251)
+ + +|.+|++..
T Consensus 240 ka~~~~F~~ii~~~ 253 (255)
T 1b9b_A 240 KESFIELARIMRGV 253 (255)
T ss_dssp STHHHHHHHHHTC-
T ss_pred cCccccHHHHHHHH
Confidence 9 7 899999753
No 13
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-97 Score=658.80 Aligned_cols=245 Identities=41% Similarity=0.632 Sum_probs=232.7
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||||||+||||||++.+++.+|++.+.... ++.+ ++++|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~-~~~~-vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS 78 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLL-PPLQ-SEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVS 78 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHC-CCCS-SEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEeCccccCHHHHHHHHHHHHhhc-cccC-ceEEEeCCHHHHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCC
Confidence 499999999999999999999999986632 2224 99999999999999999887 78999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (250)
T 1yya_A 79 ARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGP 158 (250)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSG
T ss_pred HHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999885 47
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+|||||||+
T Consensus 159 ~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (250)
T 1yya_A 159 EALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLE 238 (250)
T ss_dssp GGCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhC
Confidence 89999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred -hHHHHHHHHH
Q 025540 239 -PEFIDIIKSA 248 (251)
Q Consensus 239 -~~F~~Ii~~~ 248 (251)
++|.+|++..
T Consensus 239 a~~F~~ii~~~ 249 (250)
T 1yya_A 239 LESFLALLRIA 249 (250)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHhc
Confidence 7899999853
No 14
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=5.6e-97 Score=658.68 Aligned_cols=244 Identities=56% Similarity=0.919 Sum_probs=232.2
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+||||||++.+++.+|++.+..... + .+++++|||||++|..+.+.+. +++.+|||||| .++||||||||
T Consensus 4 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~-~-~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS 80 (251)
T 2vxn_A 4 KPQPIAAANWKCNGTTASIEKLVQVFNEHTI-S-HDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEVS 80 (251)
T ss_dssp CCCCEEEEECCSCCCHHHHHHHHHHHHHSCC-C-SCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCSSCTTCCB
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhcc-c-cCceEEEECcHHHHHHHHHHhcCCCceEeecccC-CCCCCCcCcCC
Confidence 7999999999999999999999999876432 2 4699999999999999999887 78999999999 99999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (251)
T 2vxn_A 81 MPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 160 (251)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999885 47
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+|||||||+
T Consensus 161 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 240 (251)
T 2vxn_A 161 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLK 240 (251)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH
Confidence 89999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHH
Q 025540 239 PEFIDIIKSA 248 (251)
Q Consensus 239 ~~F~~Ii~~~ 248 (251)
++|.+|++..
T Consensus 241 ~~F~~Ii~~~ 250 (251)
T 2vxn_A 241 PEFRDIIDAT 250 (251)
T ss_dssp TTHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 7799999853
No 15
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=100.00 E-value=5.8e-97 Score=658.28 Aligned_cols=244 Identities=50% Similarity=0.862 Sum_probs=232.3
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+||||||++.+++.+|++.+.... .+ .+++++|||||++|..+.+.+. +++.+|||||| .++||||||||
T Consensus 3 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~-~~-~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS 79 (250)
T 2j27_A 3 KPQPIAAANWKCNGSQQSLSELIDLFNSTS-IN-HDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVS 79 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTCC-CC-SCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCBSCTTCCB
T ss_pred CCCcEEEEECccccCHHHHHHHHHHHHhhc-cc-cCceEEEeCCHHHHHHHHHHhcCCCceEeecccC-CCCCCcccccC
Confidence 799999999999999999999999987632 22 4699999999999999999887 78999999999 99999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (250)
T 2j27_A 80 LPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADW 159 (250)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999885 47
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||+++++|++||++|.++|+.++++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 160 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 239 (250)
T 2j27_A 160 AKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK 239 (250)
T ss_dssp GGEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH
Confidence 79999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHH
Q 025540 239 PEFIDIIKSA 248 (251)
Q Consensus 239 ~~F~~Ii~~~ 248 (251)
++|.+|++..
T Consensus 240 ~~F~~ii~~~ 249 (250)
T 2j27_A 240 PEFVDIIKAT 249 (250)
T ss_dssp TTHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 7799999853
No 16
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=100.00 E-value=7e-97 Score=659.72 Aligned_cols=246 Identities=48% Similarity=0.823 Sum_probs=232.5
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+||||||++.+++.+|++.+.....+ .+++++|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 3 ~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~--~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEiS 80 (257)
T 2yc6_A 3 ARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIP--DSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETS 80 (257)
T ss_dssp CCCCEEEEECCSCCCHHHHHHHHHHHHTSCCC--TTSEEEEECCGGGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCC
T ss_pred CCCeEEEEECccccCHHHHHHHHHHHhhcccc--cCceEEEeCCHHHHHHHHHHhCCCCceEEeccCCCCCCcCccCccC
Confidence 68999999999999999999999998652222 5699999999999999999887 78999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhcc-CC--
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV-SS-- 157 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i-~~-- 157 (251)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|+++ +.
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (257)
T 2yc6_A 81 VEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKM 160 (257)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 52
Q ss_pred -CCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 158 -WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 158 -~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
+++++||||||||||||++||||++|++|++||++|.++|+.++++++|||||||||++|+.+|+.++||||+||||||
T Consensus 161 ~~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAs 240 (257)
T 2yc6_A 161 LWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGAS 240 (257)
T ss_dssp HHHTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGG
T ss_pred ccCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHH
Confidence 6799999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHh
Q 025540 237 LKPEFIDIIKSAE 249 (251)
Q Consensus 237 l~~~F~~Ii~~~~ 249 (251)
|+++|.+|++...
T Consensus 241 L~a~F~~Ii~~~~ 253 (257)
T 2yc6_A 241 LKPEFMTMIDILT 253 (257)
T ss_dssp GSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9933999998754
No 17
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=5.6e-97 Score=659.67 Aligned_cols=245 Identities=44% Similarity=0.660 Sum_probs=231.8
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+||||||++.+++.+|++.+.... +...+++++|||||++|..+.+.+. +++.+||||||+.++||||||||
T Consensus 1 Mrk~~i~gNwKmn~~~~~~~~~~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS 79 (255)
T 1tre_A 1 MRHPLVMGNWKLNGSRHMVHELVSNLRKEL-AGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETS 79 (255)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHH-TTCCSCEEEEECCTTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCC
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhc-ccccCeeEEEeCcHHHHHHHHHHhcCCCCeEeeccCCCCCCCCcCCcCC
Confidence 499999999999999999999999886522 2224699999999999999999887 78999999999999999999999
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (255)
T 1tre_A 80 AAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAF 159 (255)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999885 47
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||+++++|++||++|.+ |+.++++++||||||||||+|+.+|+.++||||+|||||||+
T Consensus 160 ~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (255)
T 1tre_A 160 EGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAK-VDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLK 238 (255)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGC
T ss_pred CcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcCcccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhC
Confidence 8999999999999999999999999999999999999 887778899999999999999999999999999999999999
Q ss_pred -hHHHHHHHHH
Q 025540 239 -PEFIDIIKSA 248 (251)
Q Consensus 239 -~~F~~Ii~~~ 248 (251)
++|.+|++..
T Consensus 239 a~~F~~Ii~~~ 249 (255)
T 1tre_A 239 ADAFAVIVKAA 249 (255)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 7899999864
No 18
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=2.3e-96 Score=660.75 Aligned_cols=245 Identities=54% Similarity=0.852 Sum_probs=233.5
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccccH
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISA 81 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~ 81 (251)
||||||+||||||++.+++.+|++.+..... + .+++++|||||++|..+.+.+...|.+||||||+.++|||||||||
T Consensus 22 mrk~~i~gNWKmn~t~~~~~~l~~~l~~~~~-~-~~vevvv~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GAfTGEIS~ 99 (275)
T 1mo0_A 22 TRKFFVGGNWKMNGDYASVDGIVTFLNASAD-N-SSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEISP 99 (275)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHSCC-C-TTEEEEEECCGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHhhhcc-c-cCceEEEeCcHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCcCCH
Confidence 7999999999999999999999999876432 2 5799999999999999999887339999999999999999999999
Q ss_pred HHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCe
Q 025540 82 EMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNI 161 (251)
Q Consensus 82 ~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~ 161 (251)
+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|+++++++++
T Consensus 100 ~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~~l~~~~~~~~v 179 (275)
T 1mo0_A 100 AMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENI 179 (275)
T ss_dssp HHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCSTTE
T ss_pred HHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988668999
Q ss_pred EEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH
Q 025540 162 VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE 240 (251)
Q Consensus 162 iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~ 240 (251)
+||||||||||||++||||+||++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+|||||||+ ++
T Consensus 180 vIAYEPvWAIGTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka~~ 259 (275)
T 1mo0_A 180 VIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDF 259 (275)
T ss_dssp EEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGSTHH
T ss_pred EEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhChHH
Confidence 99999999999999999999999999999999999998888899999999999999999999999999999999999 78
Q ss_pred HHHHHHHH
Q 025540 241 FIDIIKSA 248 (251)
Q Consensus 241 F~~Ii~~~ 248 (251)
|.+|++..
T Consensus 260 F~~Ii~~~ 267 (275)
T 1mo0_A 260 VKIINARS 267 (275)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhh
Confidence 99999864
No 19
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=8.6e-97 Score=657.49 Aligned_cols=247 Identities=42% Similarity=0.663 Sum_probs=233.3
Q ss_pred CceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCccccccccH
Q 025540 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISA 81 (251)
Q Consensus 3 r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS~ 81 (251)
|||||+||||||++.+++.+|++.+.... +...+++++|||||++|..+.+.+. +++.+||||||+.++|||||||||
T Consensus 1 r~~~i~gNwKmn~~~~~~~~~~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 79 (252)
T 2btm_A 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHV-PPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSP 79 (252)
T ss_dssp CCCEEEEECCBCCCHHHHHHHHHHHTTTS-CCTTTCEEEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCH
T ss_pred CCcEEEEEcccccCHHHHHHHHHHHHhhc-ccccCeeEEEECcHHHHHHHHHHhcCCCceEEeccCCCCCCCCcCCcCCH
Confidence 68999999999999999999999886532 2234699999999999999999887 789999999999999999999999
Q ss_pred HHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CCC
Q 025540 82 EMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWS 159 (251)
Q Consensus 82 ~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~~ 159 (251)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ +++
T Consensus 80 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~ 159 (252)
T 2btm_A 80 VMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVK 159 (252)
T ss_dssp HHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHT
T ss_pred HHHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999886 368
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK- 238 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~- 238 (251)
+++||||||||||||++||||+++++|++||++|.++|+.++++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 160 ~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a 239 (252)
T 2btm_A 160 QAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEP 239 (252)
T ss_dssp TCEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSH
T ss_pred CEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhCh
Confidence 9999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhc
Q 025540 239 PEFIDIIKSAEL 250 (251)
Q Consensus 239 ~~F~~Ii~~~~~ 250 (251)
++|.+|++.+..
T Consensus 240 ~~F~~Ii~~~~~ 251 (252)
T 2btm_A 240 ASFLQLVEAGRH 251 (252)
T ss_dssp HHHHHHHHTTC-
T ss_pred HHHHHHHHHHhc
Confidence 789999987543
No 20
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=2e-96 Score=656.76 Aligned_cols=246 Identities=41% Similarity=0.641 Sum_probs=231.5
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC---CCceEeeecccccCCcccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR---PGFHVAAQNCWVKKGGAFTGE 78 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~---~~i~vgAQn~~~~~~Ga~TGe 78 (251)
||+|||+||||||++.+++.+|++.+.... +...+++++|||||++|..+.+.+. +++.+||||||+.++||||||
T Consensus 1 mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGE 79 (256)
T 1aw2_A 1 MRHPVVMGNWKLNGSKEMVVDLLNGLNAEL-EGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGD 79 (256)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHT-TTCCSSEEEEECCGGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTC
T ss_pred CCCCEEEEEcccccCHHHHHHHHHHHHhhc-ccccCeeEEEeCcHHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCc
Confidence 499999999999999999999999886532 2234799999999999999988775 589999999999999999999
Q ss_pred ccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--
Q 025540 79 ISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS-- 156 (251)
Q Consensus 79 iS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~-- 156 (251)
||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++
T Consensus 80 iS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 159 (256)
T 1aw2_A 80 MSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVE 159 (256)
T ss_dssp CCHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGG
T ss_pred cCHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
++++++||||||||||||++||||+++++|++||+++.+ ++.++++++|||||||||++|+.+|+.++||||+||||||
T Consensus 160 ~~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAs 238 (256)
T 1aw2_A 160 ALEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAE-KSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAA 238 (256)
T ss_dssp GGTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHT-TCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGG
T ss_pred HcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeecHHH
Confidence 478999999999999999999999999999999999999 7887788999999999999999999999999999999999
Q ss_pred Cc-hHHHHHHHHHh
Q 025540 237 LK-PEFIDIIKSAE 249 (251)
Q Consensus 237 l~-~~F~~Ii~~~~ 249 (251)
|+ ++|.+|++.+.
T Consensus 239 L~a~~F~~Ii~~~~ 252 (256)
T 1aw2_A 239 LDAKSFAAIAKAAA 252 (256)
T ss_dssp GCHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHhh
Confidence 99 78999998754
No 21
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=1.1e-96 Score=660.35 Aligned_cols=247 Identities=55% Similarity=0.904 Sum_probs=232.5
Q ss_pred CCCceEEEEecccCCCHHHHHHHHHHhh---ccCCCCCCceeEEEcCccccHHHHHhhcC-CC----ceEeeecccccCC
Q 025540 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLN---EGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PG----FHVAAQNCWVKKG 72 (251)
Q Consensus 1 m~r~~~i~~NwKmn~~~~~~~~~~~~l~---~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~----i~vgAQn~~~~~~ 72 (251)
|||+|||+||||||++.+++.+|++.+. .... . .+++++|||||++|..+.+.+. ++ |.+|||||| .++
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~-~-~~vev~v~Pp~~~L~~v~~~~~~~~~~~~i~vgAQn~~-~~~ 78 (261)
T 1m6j_A 2 GAGKFVVGGNWKCNGTLASIETLTKGVAASVDAEL-A-KKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAW-TKS 78 (261)
T ss_dssp CCSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHH-H-TTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCB-SSS
T ss_pred CCCCcEEEEEcccccCHHHHHHHHHHHHhhhhhcc-c-cCceEEEeCCHHHHHHHHHHhcCCCCCceeEEEeccCC-CCC
Confidence 3689999999999999999999999886 4211 1 4699999999999999998876 55 999999999 999
Q ss_pred ccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHH
Q 025540 73 GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIA 152 (251)
Q Consensus 73 Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l 152 (251)
|||||||||+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|
T Consensus 79 GAfTGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l 158 (261)
T 1m6j_A 79 GAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAIN 158 (261)
T ss_dssp BSCTTCCBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEE
Q 025540 153 DRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGF 230 (251)
Q Consensus 153 ~~i~--~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~ 230 (251)
++++ ++++++||||||||||||++||||+++++|++||++|.++|+.++++++||||||||||+|+.+|+.++||||+
T Consensus 159 ~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~ 238 (261)
T 1m6j_A 159 NAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGF 238 (261)
T ss_dssp HHSCTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEE
T ss_pred hcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCee
Confidence 9885 47899999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred EEcCccCc-hHHHHHHHHHhc
Q 025540 231 LVGGASLK-PEFIDIIKSAEL 250 (251)
Q Consensus 231 LVG~asl~-~~F~~Ii~~~~~ 250 (251)
|||||||+ ++|.+|++.+.+
T Consensus 239 LVGgAsL~a~~F~~ii~~~~~ 259 (261)
T 1m6j_A 239 LVGGASLDAAKFKTIINSVSE 259 (261)
T ss_dssp EESGGGGSHHHHHHHHGGGGG
T ss_pred EecHHHhChHHHHHHHHHHHh
Confidence 99999999 789999987654
No 22
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=100.00 E-value=1e-92 Score=644.46 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=225.1
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCC-----CCCceeEEEcCccccHHHHHhhcC---------------CCce
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVP-----SSDVVEVVVSPPFVFLGLVKSSLR---------------PGFH 61 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~-----~~~~~~v~i~Pp~~~L~~~~~~~~---------------~~i~ 61 (251)
||||||+||||||++..++.+|++.|...... ...+++++|||||++|..+.+.+. ++|.
T Consensus 34 mrk~li~gNWKMn~t~~~~~~~~~~l~~~l~~~~~~~~~~~vevvV~Ppf~~L~~v~~~l~~~~~~~~~~~~~~~~~~i~ 113 (310)
T 3s6d_A 34 LPKTLLIISLKMYFTPSRTIDYIQGLLEPRNDIIRQENRSRLLLALIPDFLTIYPCSEAIKEFESNLAAPQDADTPPPLL 113 (310)
T ss_dssp CCSEEEEEECTTCCCHHHHHHHHHHHHCGGGCCSCGGGTTTEEEEEECCGGGHHHHHHHHHHHHTTSCCC------CSSE
T ss_pred ccCCEEEEEccccCCHHHHHHHHHHHHHHHhhcccccccCCceEEEECCHHHHHHHHHHHhhccccccccccccCCCcce
Confidence 59999999999999999999999988653211 124699999999999999988763 5799
Q ss_pred EeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHh-----
Q 025540 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQRE----- 136 (251)
Q Consensus 62 vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~----- 136 (251)
+||||||+.++||||||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|+
T Consensus 114 vgAQn~~~~~~GAfTGEISa~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~ 193 (310)
T 3s6d_A 114 LGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEA 193 (310)
T ss_dssp EEESCCCSSSSSSCTTCCCHHHHHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHH
T ss_pred EEeccccccCCCCccccCCHHHHHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcc
Q 025540 137 AGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGA 216 (251)
Q Consensus 137 ~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~ 216 (251)
+|+|.++|.+||+++|++++.+++++||||||||||||++||||+|+++|++||+++.++|+ +.++++||||||||||+
T Consensus 194 ~g~t~~vv~~Ql~~~l~~l~~~~~vVIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~-~~a~~vrILYGGSV~~~ 272 (310)
T 3s6d_A 194 IGRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDR-HRKGEVRILYGGSAGPG 272 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTSCEEEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHT-TCSSCEEEEEEEEECTT
T ss_pred cccHHHHHHHHHHHHHhcCCcccceEEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhh-cccCceeEEEcCccCHH
Confidence 99999999999999999998778999999999999999999999999999999999999885 56789999999999999
Q ss_pred cHHHHhcCCCCCEEEEcCccCc-hHHHHHHHHHh
Q 025540 217 NCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 249 (251)
Q Consensus 217 n~~~l~~~~~vDG~LVG~asl~-~~F~~Ii~~~~ 249 (251)
|+.+++.++||||+|||||||+ ++|.+|++.+.
T Consensus 273 n~~~~~l~~dVDG~LVGgASL~a~~F~~Ii~e~~ 306 (310)
T 3s6d_A 273 LWGPGGLGKEVDGMFLGRFAHDIEGVRKVVREVE 306 (310)
T ss_dssp TTTTTSGGGTCSEEEECGGGGSHHHHHHHHHHHH
T ss_pred HHhhhcccCCCCEEEeeheeecHHHHHHHHHHHH
Confidence 9999666799999999999999 89999999764
No 23
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=2.8e-92 Score=626.42 Aligned_cols=236 Identities=50% Similarity=0.822 Sum_probs=219.1
Q ss_pred CCceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCcccccccc
Q 025540 2 GRKFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEIS 80 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS 80 (251)
||+|||+||||||++.+++.+|++.+.... ++ .+++++|||||++|..+.+.+. +++.+||||||+.++
T Consensus 4 mrk~~i~gNWKmn~~~~~~~~l~~~l~~~~-~~-~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~-------- 73 (244)
T 2v5b_A 4 KPQPIAAANWKCNGSESLLVPLIETLNAAT-FD-HDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAGNADA-------- 73 (244)
T ss_dssp CCCCEEEEEECC-----CCHHHHHHHHHCC-CC-SCCEEEEEECGGGHHHHHHHCCCTTEEEEESCCCCHHH--------
T ss_pred CCCcEEEEECCcccCHHHHHHHHHHHHhhc-cc-cCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCC--------
Confidence 699999999999999999999999987633 22 5699999999999999999887 789999999998887
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC--CC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~--~~ 158 (251)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ ++
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~~ 153 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAW 153 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999886 36
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++||||||||||||++||||++|++|++||++|.++|+.++++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 154 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 233 (244)
T 2v5b_A 154 SRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK 233 (244)
T ss_dssp GGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH
Confidence 79999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 025540 239 PEFIDIIKS 247 (251)
Q Consensus 239 ~~F~~Ii~~ 247 (251)
++|.+|++.
T Consensus 234 ~~F~~Ii~~ 242 (244)
T 2v5b_A 234 PEFVEIIEA 242 (244)
T ss_dssp TTHHHHHHT
T ss_pred HHHHHHHHh
Confidence 779999985
No 24
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=1.8e-91 Score=617.36 Aligned_cols=229 Identities=34% Similarity=0.515 Sum_probs=210.8
Q ss_pred ceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccccHHH
Q 025540 4 KFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEM 83 (251)
Q Consensus 4 ~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~m 83 (251)
+|||+||||||++.+++.+|++.+.... +...+++++|||||++|..+. .+++.+||||||+.++||||||||++|
T Consensus 1 ~~~i~gNwKmn~~~~~~~~l~~~l~~~~-~~~~~vev~v~Pp~~~L~~v~---~~~i~vgAQn~~~~~~GAfTGEiS~~m 76 (233)
T 2jgq_A 1 TKIAMANFKSAMPIFKSHAYLKELEKTL-KPQHFDRVFVFPDFFGLLPNS---FLHFTLGVQNAYPRDCGAFTGEITSKH 76 (233)
T ss_dssp CCEEEEECTBCSCHHHHHHHHHHHHHHS-CGGGTTTEEEECCTTTCCCSC---CSSSEECBSCCBSSSSBSCTTCCBHHH
T ss_pred CcEEEEECCcCcCHHHHHHHHHHHHhhc-ccccCceEEEeCCHHHHHHhc---CCCceEEeccCCCCCCCCccCccCHHH
Confidence 5899999999999999999999886532 222468999999999998876 467999999999999999999999999
Q ss_pred HHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcC--CcHHHHHHHHHHHHhccCCCCCe
Q 025540 84 LVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAG--STMDVVAAQTKAIADRVSSWSNI 161 (251)
Q Consensus 84 Lkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g--~~~~~~~~Ql~~~l~~i~~~~~~ 161 (251)
|+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++| +|.+++.+||+. +. .+ ++++
T Consensus 77 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~-l~-~~-~~~~ 153 (233)
T 2jgq_A 77 LEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLEN-ID-LN-YPNL 153 (233)
T ss_dssp HHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTT-SC-TT-CTTE
T ss_pred HHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHh-hh-hh-ccce
Confidence 9999999999999999999999999999999999999999999999999999999 999999999998 33 23 7899
Q ss_pred EEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH
Q 025540 162 VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE 240 (251)
Q Consensus 162 iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~ 240 (251)
+|||||+||||||++||||+++++|++||+++. +++|||||||||++|+.+++.++||||+|||||||+ ++
T Consensus 154 vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~--------~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~ 225 (233)
T 2jgq_A 154 VVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELEN 225 (233)
T ss_dssp EEEECCGGGTTC--CCCHHHHHHHHHHHHHHSC--------TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHH
T ss_pred EEEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHh--------cCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHH
Confidence 999999999999999999999999999999864 469999999999999999999999999999999999 78
Q ss_pred HHHHHHH
Q 025540 241 FIDIIKS 247 (251)
Q Consensus 241 F~~Ii~~ 247 (251)
|.+|++.
T Consensus 226 f~~ii~~ 232 (233)
T 2jgq_A 226 FKTIISF 232 (233)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999974
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=100.00 E-value=1.6e-68 Score=469.65 Aligned_cols=213 Identities=22% Similarity=0.234 Sum_probs=192.4
Q ss_pred CCceEEEEecccCCCH--HHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccc
Q 025540 2 GRKFFVGGNWKCNGTP--EEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEI 79 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~--~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGei 79 (251)
||+|+|++|||||++. +++.+|++.+.... ...+++++++||+++|..+++.+ ++.+++|||++.++|||||||
T Consensus 4 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGei 79 (225)
T 1hg3_A 4 LKEPIIAINFKTYIEATGKRALEIAKAAEKVY--KETGVTIVVAPQLVDLRMIAESV--EIPVFAQHIDPIKPGSHTGHV 79 (225)
T ss_dssp CCSSEEEEECTBCGGGSHHHHHHHHHHHHHHH--HTTCCEEEEECCHHHHHHHHHSC--SSCBEESCCCSCCSBSCTTCC
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhhc--cccCCcEEEeCCHHHHHHHHHhc--CCceeeeeCCcccCCCccCcc
Confidence 6899999999999875 99999998886521 12468999999999999998876 688999999999999999999
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
|+.||+++||+|||+||||||.+|+| +++|+++|+++||+||+||||++|++ . +.. ..
T Consensus 80 s~~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~--------------~-~~~---~~ 137 (225)
T 1hg3_A 80 LPEAVKEAGAVGTLLNHSENRMILAD----LEAAIRRAEEVGLMTMVCSNNPAVSA--------------A-VAA---LN 137 (225)
T ss_dssp CHHHHHHTTCCEEEESCGGGCCBHHH----HHHHHHHHHHHTCEEEEEESSHHHHH--------------H-HHT---TC
T ss_pred cHHHHHHcCCCEEEECcchhcCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHH--------------H-Hhc---CC
Confidence 99999999999999999999999998 67999999999999999999998774 2 222 35
Q ss_pred CeEEEEcccCccCCC---CCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 160 NIVLAYEPVWAIGTG---KVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG---~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
+.+|||||+|||||| +++++++++++|++||.+ .++++|||||||++.|+.+++.++|+||+|||+||
T Consensus 138 ~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~---------~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~ 208 (225)
T 1hg3_A 138 PDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKV---------NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGV 208 (225)
T ss_dssp CSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHH---------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred CCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhc---------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHH
Confidence 679999999999999 899999999999999986 24689999999999999999999999999999999
Q ss_pred Cc-hHHHHHHHHHh
Q 025540 237 LK-PEFIDIIKSAE 249 (251)
Q Consensus 237 l~-~~F~~Ii~~~~ 249 (251)
|+ ++|.++++.+.
T Consensus 209 l~a~~~~~~i~~l~ 222 (225)
T 1hg3_A 209 TKAKDPEKAIWDLV 222 (225)
T ss_dssp HTCSSHHHHHHHHH
T ss_pred HCCcCHHHHHHHHH
Confidence 99 89999998764
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=100.00 E-value=2.1e-68 Score=469.20 Aligned_cols=212 Identities=28% Similarity=0.297 Sum_probs=190.9
Q ss_pred CCceEEEEecccCCCH--HHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccc
Q 025540 2 GRKFFVGGNWKCNGTP--EEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEI 79 (251)
Q Consensus 2 ~r~~~i~~NwKmn~~~--~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGei 79 (251)
||+|+|++|||||++. +++.+|++.+.... ...+++++++|||++|..+++.+ ++.+++|||++.++|||||||
T Consensus 1 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGei 76 (226)
T 1w0m_A 1 MRLPILIINFKAYGEAAGKRAVELAKAAERAA--RELGVNIVVAPNHLELGLVSQSV--DIPVYAQGADVEAGGAHTAHV 76 (226)
T ss_dssp CCSSEEEEECTBCGGGSTHHHHHHHHHHHHHH--HHHTCEEEEECCGGGHHHHHTTC--SSCBEESCCSBSSCSSCTTCC
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhcc--cccCCcEEEeCCHHHHHHHHHhc--CCceEeeECChhhCCCccCCC
Confidence 4899999999999876 99999998886521 11368999999999999998865 688999999999999999999
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
|+.||+++||+|||+||||||.+|+| +++|+++|+++||+||+||||+++++ .++. ..
T Consensus 77 s~~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~--------------~~~~----~~ 134 (226)
T 1w0m_A 77 SLENIKEAGGSGVILNHSEAPLKLND----LARLVAKAKSLGLDVVVCAPDPRTSL--------------AAAA----LG 134 (226)
T ss_dssp BHHHHHHHTCCEEEECCTTSCCBHHH----HHHHHHHHHHTTCEEEEEESSHHHHH--------------HHHH----TC
T ss_pred CHHHHHHcCCCEEEEeeeeccCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHH--------------HHhc----CC
Confidence 99999999999999999999999998 67999999999999999999998774 2222 34
Q ss_pred CeEEEEcccCccCCC---CCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 160 NIVLAYEPVWAIGTG---KVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG---~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
+.+|||||+|||||| +++++++++++|++||.+ .++++|||||||++.|+.+++.++|+||+|||+||
T Consensus 135 ~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~---------~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~ 205 (226)
T 1w0m_A 135 PHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRH---------FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAA 205 (226)
T ss_dssp CSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHH---------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhc---------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHH
Confidence 679999999999999 889999999999999986 24689999999999999999999999999999999
Q ss_pred Cc-hHHHHHHHHH
Q 025540 237 LK-PEFIDIIKSA 248 (251)
Q Consensus 237 l~-~~F~~Ii~~~ 248 (251)
|+ ++|.++++.+
T Consensus 206 l~a~~~~~~i~~l 218 (226)
T 1w0m_A 206 VKAKDPYAKIVEL 218 (226)
T ss_dssp HTCSSHHHHHHHH
T ss_pred HCCcCHHHHHHHH
Confidence 99 8999999875
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.5e-53 Score=372.36 Aligned_cols=209 Identities=21% Similarity=0.296 Sum_probs=174.6
Q ss_pred EEEEecccCCCH--HHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCccccccccHHH
Q 025540 6 FVGGNWKCNGTP--EEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEM 83 (251)
Q Consensus 6 ~i~~NwKmn~~~--~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~m 83 (251)
+|++|||||++. +++.+|++.+... . ...+++++++||+++|..+++.+ ++.+++||+++.++|+||||+|+.|
T Consensus 2 ~i~~NwKm~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~v~~~~--~~~v~aqd~~~~~~ga~tGei~~~~ 77 (219)
T 2h6r_A 2 VIVINYKTYNESIGNRGLEIAKIAEKV-S-EESGITIGVAPQFVDLRMIVENV--NIPVYAQHIDNINPGSHTGHILAEA 77 (219)
T ss_dssp CEEEECTTCGGGSTHHHHHHHHHHHHH-H-HHHTCCEEEECCTTTHHHHHHHC--CSCBEESCCCSCCSBSCTTCCCHHH
T ss_pred EEEEECccCCCCCHHHHHHHHHHHHhc-c-cccCCcEEEECCHHHHHHHHHHc--CCcEEEEECChhhcCCccCchHHHH
Confidence 899999999875 9999999887652 1 11358999999999999998876 6889999999999999999999999
Q ss_pred HHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEE
Q 025540 84 LVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVL 163 (251)
Q Consensus 84 Lkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iI 163 (251)
++++||++|++||||||..++| +++|++.|.++||.||+||+++.+.+ . +.. ....+|
T Consensus 78 ~~~~Gad~Vll~~ser~l~~~e----~~~~~~~a~~~Gl~~iv~v~~~~e~~--------------~-~~~---~~~~~i 135 (219)
T 2h6r_A 78 IKDCGCKGTLINHSEKRMLLAD----IEAVINKCKNLGLETIVCTNNINTSK--------------A-VAA---LSPDCI 135 (219)
T ss_dssp HHHHTCCEEEESBTTBCCBHHH----HHHHHHHHHHHTCEEEEEESSSHHHH--------------H-HTT---TCCSEE
T ss_pred HHHcCCCEEEECCccccCCHHH----HHHHHHHHHHCCCeEEEEeCCchHHH--------------H-HHh---CCCCEE
Confidence 9999999999999999999887 56999999999999999999998653 1 222 245699
Q ss_pred EEcccCccCCC---CCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h
Q 025540 164 AYEPVWAIGTG---KVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P 239 (251)
Q Consensus 164 AYEPvWAIGtG---~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~ 239 (251)
+|||+|+|||| +++++++++++++.+|+. ..++||+|||||++.|+.+.+.+.++||+|||+|+++ +
T Consensus 136 ~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~---------~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~ 206 (219)
T 2h6r_A 136 AVEPPELIGTGIPVSKANPEVVEGTVRAVKEI---------NKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAK 206 (219)
T ss_dssp EECCCC--------------CSHHHHHHHHHH---------CTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCS
T ss_pred EEEeccccccCCCCccCCHHHHHHHHHHHHhc---------cCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcc
Confidence 99999999999 899999999999999986 2368999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHh
Q 025540 240 EFIDIIKSAE 249 (251)
Q Consensus 240 ~F~~Ii~~~~ 249 (251)
+|.++++.+.
T Consensus 207 d~~~~~~~l~ 216 (219)
T 2h6r_A 207 NVEEAIRELI 216 (219)
T ss_dssp SHHHHHHHHC
T ss_pred cHHHHHHHHH
Confidence 9999998764
No 28
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.49 E-value=1.3e-13 Score=123.80 Aligned_cols=151 Identities=15% Similarity=0.035 Sum_probs=112.3
Q ss_pred hhcC--CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCch--------------hhccccccChHHHHHHHHHH
Q 025540 54 SSLR--PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHS--------------ERRLILNELNEFVGDKVAYA 117 (251)
Q Consensus 54 ~~~~--~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHS--------------ERR~~f~Etd~~i~~Kv~~a 117 (251)
+.++ .++.+.|| ++..++|.+||.+- +.||+.|++.| ++|| |+|.-|.+-. +-+++|
T Consensus 87 evlp~v~~iPV~Ag-v~~~DP~~~~g~~L-e~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~ev----e~I~~A 159 (286)
T 2p10_A 87 EVLPVVRHTPVLAG-VNGTDPFMVMSTFL-RELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEV----EMIAEA 159 (286)
T ss_dssp HHGGGCSSSCEEEE-ECTTCTTCCHHHHH-HHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHH----HHHHHH
T ss_pred hhhccCCCCCEEEE-ECCcCCCcCHHHHH-HHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHH----HHHHHH
Confidence 3444 46889999 99999999999999 99999999999 9999 9998777655 678899
Q ss_pred HHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEccc----CccCCCCCCCHHH----HHHHHHHH
Q 025540 118 LSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPV----WAIGTGKVATPAQ----AQEVHFEL 189 (251)
Q Consensus 118 l~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPv----WAIGtG~~a~~e~----i~~~~~~I 189 (251)
.+.||..+.|+-...+.+ +..+ ..+.+|+.||. -.||+|.+.|.++ ++++++.+
T Consensus 160 ~~~gL~Ti~~v~~~eeA~--------------amA~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~ 221 (286)
T 2p10_A 160 HKLDLLTTPYVFSPEDAV--------------AMAK----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAA 221 (286)
T ss_dssp HHTTCEECCEECSHHHHH--------------HHHH----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEecCCHHHHH--------------HHHH----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHH
Confidence 999999999999876554 3333 46789999999 5999998876544 56666666
Q ss_pred HHHHHhcCCccccCcceEEEcc-CCCcccHHHHhcCC--CCCEEEEcCccCc
Q 025540 190 RKWLLANTSPEIAAATRIIYGG-SVNGANCKELAAQP--DVDGFLVGGASLK 238 (251)
Q Consensus 190 R~~l~~~~~~~~~~~i~ilYGG-SV~~~n~~~l~~~~--~vDG~LVG~asl~ 238 (251)
|+. ++++.+|.|| .++...+.+.+-+. ++||++.+++--+
T Consensus 222 ~~v---------npdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier 264 (286)
T 2p10_A 222 RTI---------RDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMER 264 (286)
T ss_dssp HHH---------CSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHH
T ss_pred HHh---------CCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhc
Confidence 654 5667777655 77655444444444 7999999988766
No 29
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.34 E-value=2e-06 Score=76.39 Aligned_cols=135 Identities=14% Similarity=0.178 Sum_probs=98.4
Q ss_pred ccCCccccccc---cHHHHHh--CCCCEEEe-CchhhccccccChHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCCcH
Q 025540 69 VKKGGAFTGEI---SAEMLVN--LEIPWVIL-GHSERRLILNELNEFVGDKVAYALSQGLKVI-ACVGETLEQREAGSTM 141 (251)
Q Consensus 69 ~~~~Ga~TGei---S~~mLkd--~G~~~vii-GHSERR~~f~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~~~r~~g~~~ 141 (251)
++..|+||-|= .+.|-+| .|.+|+=+ =|+|+|.++.+..+.+ +..+...+.|++++ +|+......|
T Consensus 78 pNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv-~aa~~L~~~Gf~Vlpy~~dd~~~ak------ 150 (265)
T 1wv2_A 78 PNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDDPIIAR------ 150 (265)
T ss_dssp EECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSCHHHHH------
T ss_pred CcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHH-HHHHHHHHCCCEEEEEeCCCHHHHH------
Confidence 57889999884 6778888 46778744 5899999998877544 45666777799999 8999865433
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEcc-cCccCCCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHH
Q 025540 142 DVVAAQTKAIADRVSSWSNIVLAYEP-VWAIGTGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCK 219 (251)
Q Consensus 142 ~~~~~Ql~~~l~~i~~~~~~iIAYEP-vWAIGtG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~ 219 (251)
-+.. ....+| +| ---||||+.. +++.++ .|++. .++||+.+|+|..-...
T Consensus 151 ---------rl~~---~G~~aV--mPlg~pIGsG~Gi~~~~lI~----~I~e~----------~~vPVI~eGGI~TPsDA 202 (265)
T 1wv2_A 151 ---------QLAE---IGCIAV--MPLAGLIGSGLGICNPYNLR----IILEE----------AKVPVLVDAGVGTASDA 202 (265)
T ss_dssp ---------HHHH---SCCSEE--EECSSSTTCCCCCSCHHHHH----HHHHH----------CSSCBEEESCCCSHHHH
T ss_pred ---------HHHH---hCCCEE--EeCCccCCCCCCcCCHHHHH----HHHhc----------CCCCEEEeCCCCCHHHH
Confidence 2332 334444 77 3349999866 666654 33331 24899999999987777
Q ss_pred HHhcCCCCCEEEEcCccCc
Q 025540 220 ELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 220 ~l~~~~~vDG~LVG~asl~ 238 (251)
..+-+.+.||+|||++-.+
T Consensus 203 a~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 203 AIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHTCSEEEESHHHHT
T ss_pred HHHHHcCCCEEEEChHHhC
Confidence 7777789999999998765
No 30
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.09 E-value=8.4e-05 Score=65.68 Aligned_cols=181 Identities=10% Similarity=0.062 Sum_probs=117.0
Q ss_pred eEEEEecccC----CCH---HHHHHHHHHhhccCCCCCCceeEE-----EcCccccHHHHHhhcCCCceEeeecccccCC
Q 025540 5 FFVGGNWKCN----GTP---EEVKKIVSVLNEGQVPSSDVVEVV-----VSPPFVFLGLVKSSLRPGFHVAAQNCWVKKG 72 (251)
Q Consensus 5 ~~i~~NwKmn----~~~---~~~~~~~~~l~~~~~~~~~~~~v~-----i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~ 72 (251)
+.|++|.|-+ +.. ....++++..... . ..+.|+ +..++.+|..+++.+ ++.+-.|| .
T Consensus 41 ~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A---~~IsVlTd~~~F~gs~~dL~~ir~~v--~lPvLrKD-----f 109 (251)
T 1i4n_A 41 VKIIAEFKKASPSAGDINADASLEDFIRMYDEL-A---DAISILTEKHYFKGDPAFVRAARNLT--CRPILAKD-----F 109 (251)
T ss_dssp CEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-C---SEEEEECCCSSSCCCTHHHHHHHTTC--CSCEEEEC-----C
T ss_pred ceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-C---CceEEEecccccCCCHHHHHHHHHhC--CCCEEEee-----C
Confidence 5789999965 110 0223333333222 1 345554 668999999998765 45566888 2
Q ss_pred ccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHH
Q 025540 73 GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIA 152 (251)
Q Consensus 73 Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l 152 (251)
+ .++.- ...++++|++.|++-|+-+ +++.+..=++.|.+.||.+++||-...| ++.++
T Consensus 110 i-~~~~q-i~ea~~~GAD~ilLi~a~l------~~~~l~~l~~~a~~lGl~~lvEv~~~eE--------------~~~A~ 167 (251)
T 1i4n_A 110 Y-IDTVQ-VKLASSVGADAILIIARIL------TAEQIKEIYEAAEELGMDSLVEVHSRED--------------LEKVF 167 (251)
T ss_dssp C-CSTHH-HHHHHHTTCSEEEEEGGGS------CHHHHHHHHHHHHTTTCEEEEEECSHHH--------------HHHHH
T ss_pred C-CCHHH-HHHHHHcCCCEEEEecccC------CHHHHHHHHHHHHHcCCeEEEEeCCHHH--------------HHHHH
Confidence 2 33332 4558999999999999943 3467888889999999999999995442 22444
Q ss_pred hccCCC-CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEE
Q 025540 153 DRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGF 230 (251)
Q Consensus 153 ~~i~~~-~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~ 230 (251)
+ . ..-+|...+.=..+.+ .+.+... +.++. . ..++.++-+|+++ ++.+..+ ... +||+
T Consensus 168 ~----l~g~~iIGinnr~l~t~~--~d~~~~~---~l~~~-----i----p~~~~vIaEsGI~t~edv~~~-~~~-a~av 227 (251)
T 1i4n_A 168 S----VIRPKIIGINTRDLDTFE--IKKNVLW---ELLPL-----V----PDDTVVVAESGIKDPRELKDL-RGK-VNAV 227 (251)
T ss_dssp T----TCCCSEEEEECBCTTTCC--BCTTHHH---HHGGG-----S----CTTSEEEEESCCCCGGGHHHH-TTT-CSEE
T ss_pred h----cCCCCEEEEeCcccccCC--CCHHHHH---HHHHh-----C----CCCCEEEEeCCCCCHHHHHHH-HHh-CCEE
Confidence 4 4 4568889987555442 2333222 22221 1 2357889999998 5555554 555 9999
Q ss_pred EEcCccCc
Q 025540 231 LVGGASLK 238 (251)
Q Consensus 231 LVG~asl~ 238 (251)
|||++-.+
T Consensus 228 LVG~aimr 235 (251)
T 1i4n_A 228 LVGTSIMK 235 (251)
T ss_dssp EECHHHHH
T ss_pred EEcHHHcC
Confidence 99998775
No 31
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.89 E-value=3.4e-05 Score=68.30 Aligned_cols=123 Identities=22% Similarity=0.255 Sum_probs=82.2
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-EeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-CiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
|-=.+.+++.|++.+||-+- -+.|.+ .-...+.++||.+|+ |.-.|.++| ++.+.+
T Consensus 106 e~F~~~~~~aGvdG~IipDL----P~eE~~----~~~~~~~~~Gl~~I~lvaP~t~~eR------------i~~ia~--- 162 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPEL----SFEESD----DLIKECERYNIALITLVSVTTPKER------------VKKLVK--- 162 (252)
T ss_dssp HHHHHHHHHTTEEEEECTTC----CGGGCH----HHHHHHHHTTCEECEEEETTSCHHH------------HHHHHT---
T ss_pred HHHHHHHHHcCCCEEEeCCC----CHHHHH----HHHHHHHHcCCeEEEEeCCCCcHHH------------HHHHHH---
Confidence 44568899999999999993 355655 455678899999887 666665555 233333
Q ss_pred CCCCeEEEEcccCccC-CCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIVLAYEPVWAIG-TGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIG-tG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG 233 (251)
..+-.|-|-+ ..| ||... .++.+.+.++.||+. .++|+++|++| +++++.++.. ..||+.||
T Consensus 163 -~a~gFiY~Vs--~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGIst~e~a~~~~~--~ADGVIVG 227 (252)
T 3tha_A 163 -HAKGFIYLLA--SIGITGTKSVEEAILQDKVKEIRSF----------TNLPIFVGFGIQNNQDVKRMRK--VADGVIVG 227 (252)
T ss_dssp -TCCSCEEEEC--CSCSSSCSHHHHHHHHHHHHHHHTT----------CCSCEEEESSCCSHHHHHHHTT--TSSEEEEC
T ss_pred -hCCCeEEEEe--cCCCCCcccCCCHHHHHHHHHHHHh----------cCCcEEEEcCcCCHHHHHHHHh--cCCEEEEC
Confidence 2344456644 456 56542 244455666666543 24899999999 6677766654 59999999
Q ss_pred CccCc
Q 025540 234 GASLK 238 (251)
Q Consensus 234 ~asl~ 238 (251)
+|-.+
T Consensus 228 SAiVk 232 (252)
T 3tha_A 228 TSIVK 232 (252)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98543
No 32
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.86 E-value=0.00059 Score=58.74 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=73.6
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS 157 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~ 157 (251)
+-..+.+.+.|+++++++ .+- .+...+-++.+.++|+.+++++.-+. ..+. ++......
T Consensus 98 ~~~~~~~~~~Gad~v~~~-~~~-------~~~~~~~~~~~~~~g~~~~~~i~~~t-------~~e~----~~~~~~~~-- 156 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV-DLP-------VFHAKEFTEIAREEGIKTVFLAAPNT-------PDER----LKVIDDMT-- 156 (248)
T ss_dssp HHHHHHHHHHTCCEEEET-TCC-------GGGHHHHHHHHHHHTCEEEEEECTTC-------CHHH----HHHHHHHC--
T ss_pred HHHHHHHHHCCCCEEEEC-CCC-------hhhHHHHHHHHHHhCCCeEEEECCCC-------HHHH----HHHHHhcC--
Confidence 446788899999999996 321 12233445566678999999886421 1111 22222221
Q ss_pred CCCeEEEEcccCccC-CCCC-CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCc-ccHHHHhcCCCCCEEEEcC
Q 025540 158 WSNIVLAYEPVWAIG-TGKV-ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNG-ANCKELAAQPDVDGFLVGG 234 (251)
Q Consensus 158 ~~~~iIAYEPvWAIG-tG~~-a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~ 234 (251)
.. +|.+-++ -| ||.. ..+...-+.++.+|+.+ ++||+.||+|+. +|+.+++. .++||+.||+
T Consensus 157 -d~-~i~~~~~--~G~~g~~~~~~~~~~~~i~~l~~~~----------~~pi~~~GGI~~~e~i~~~~~-~Gad~vivGs 221 (248)
T 1geq_A 157 -TG-FVYLVSL--YGTTGAREEIPKTAYDLLRRAKRIC----------RNKVAVGFGVSKREHVVSLLK-EGANGVVVGS 221 (248)
T ss_dssp -SS-EEEEECC--C-------CCCHHHHHHHHHHHHHC----------SSCEEEESCCCSHHHHHHHHH-TTCSEEEECH
T ss_pred -CC-eEEEEEC--CccCCCCCCCChhHHHHHHHHHhhc----------CCCEEEEeecCCHHHHHHHHH-cCCCEEEEcH
Confidence 12 2333444 34 2322 11222233444455431 489999999999 99999865 5899999999
Q ss_pred ccCc
Q 025540 235 ASLK 238 (251)
Q Consensus 235 asl~ 238 (251)
+-.+
T Consensus 222 ai~~ 225 (248)
T 1geq_A 222 ALVK 225 (248)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
No 33
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.78 E-value=3.4e-05 Score=68.65 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=91.0
Q ss_pred ccCCcccc---ccccHHHHHhCC-CCEE-EeCchhhccccccChHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCCcHH
Q 025540 69 VKKGGAFT---GEISAEMLVNLE-IPWV-ILGHSERRLILNELNEFVGDKVAYALSQGLKVI-ACVGETLEQREAGSTMD 142 (251)
Q Consensus 69 ~~~~Ga~T---GeiS~~mLkd~G-~~~v-iiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~~~r~~g~~~~ 142 (251)
++..|++| ..-.+++-+|+. .+|+ |==|+|+|.++-+..+.+ ++.+...+.|++++ +|.....
T Consensus 68 pntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv-~aa~~L~k~Gf~Vlpy~~~D~~---------- 136 (268)
T 2htm_A 68 PNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETL-KAAERLIEEDFLVLPYMGPDLV---------- 136 (268)
T ss_dssp EBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHH-HHHHHHHHTTCEECCEECSCHH----------
T ss_pred CcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHH-HHHHHHHHCCCEEeeccCCCHH----------
Confidence 67889999 555666667654 4554 234778888776665433 45666667799999 8964332
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEcc-cCccCCCCCC-CHHHHHHHHHHHHHHHHhcCCccccCc-ceEEEccCCCcccHH
Q 025540 143 VVAAQTKAIADRVSSWSNIVLAYEP-VWAIGTGKVA-TPAQAQEVHFELRKWLLANTSPEIAAA-TRIIYGGSVNGANCK 219 (251)
Q Consensus 143 ~~~~Ql~~~l~~i~~~~~~iIAYEP-vWAIGtG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~-i~ilYGGSV~~~n~~ 219 (251)
+.+.+.. ....+| +| .--||||+.. +++.++ .|++. ..+ +||+.+|+|......
T Consensus 137 -~ak~l~~-------~G~~aV--mPlg~pIGsG~Gi~~~~~L~----~i~~~---------~~~~vPVI~~GGI~tpsDA 193 (268)
T 2htm_A 137 -LAKRLAA-------LGTATV--MPLAAPIGSGWGVRTRALLE----LFARE---------KASLPPVVVDAGLGLPSHA 193 (268)
T ss_dssp -HHHHHHH-------HTCSCB--EEBSSSTTTCCCSTTHHHHH----HHHHT---------TTTSSCBEEESCCCSHHHH
T ss_pred -HHHHHHh-------cCCCEE--EecCccCcCCcccCCHHHHH----HHHHh---------cCCCCeEEEeCCCCCHHHH
Confidence 1222322 123334 88 4449999876 555433 33321 124 899999999998888
Q ss_pred HHhcCCCCCEEEEcCccCc
Q 025540 220 ELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 220 ~l~~~~~vDG~LVG~asl~ 238 (251)
..+-+.+.||+|||++-.+
T Consensus 194 a~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 194 AEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHTTCCEEEESHHHHT
T ss_pred HHHHHcCCCEEEEChHHhC
Confidence 8888899999999998776
No 34
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.63 E-value=0.00026 Score=63.20 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=77.3
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI-ACVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
|-=.+.+++.|++.+|+.- .-+.|.. .-...+.++|+.+| +|.-.+.++| ++.+.+.
T Consensus 115 ~~f~~~~~~aGvdGvIipD----lp~ee~~----~~~~~~~~~gl~~I~lvap~t~~er------------i~~i~~~-- 172 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIAD----VPTNESQ----PFVAAAEKFGIQPIFIAPPTASDET------------LRAVAQL-- 172 (271)
T ss_dssp HHHHHHHHHHTCCEEEETT----SCGGGCH----HHHHHHHHTTCEEEEEECTTCCHHH------------HHHHHHH--
T ss_pred HHHHHHHHHCCCCEEEECC----CCHHHHH----HHHHHHHHcCCeEEEEECCCCCHHH------------HHHHHHH--
Confidence 4458899999999999952 2233443 56677889999977 6665554444 2233321
Q ss_pred CCCCeEEEEcccCccC-CCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIVLAYEPVWAIG-TGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIG-tG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG 233 (251)
..-.|.|-. ..| ||... .++.+.+.++.||+. .++|++.|++|+ ++++.+.+. .+.||+.||
T Consensus 173 --~~gfiY~vs--~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGIst~e~~~~~~~-~gADgvIVG 237 (271)
T 3nav_A 173 --GKGYTYLLS--RAGVTGAETKANMPVHALLERLQQF----------DAPPALLGFGISEPAQVKQAIE-AGAAGAISG 237 (271)
T ss_dssp --CCSCEEECC--CC--------CCHHHHHHHHHHHHT----------TCCCEEECSSCCSHHHHHHHHH-TTCSEEEES
T ss_pred --CCCeEEEEe--ccCCCCcccCCchhHHHHHHHHHHh----------cCCCEEEECCCCCHHHHHHHHH-cCCCEEEEC
Confidence 222344434 445 56543 356677778888764 248999999995 677763333 579999999
Q ss_pred CccC
Q 025540 234 GASL 237 (251)
Q Consensus 234 ~asl 237 (251)
+|-.
T Consensus 238 SAiv 241 (271)
T 3nav_A 238 SAVV 241 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9844
No 35
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.62 E-value=0.00056 Score=57.40 Aligned_cols=181 Identities=18% Similarity=0.212 Sum_probs=103.2
Q ss_pred ceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCcc------ccHHHHHhhcCCCceEeeecccccCCccccc
Q 025540 4 KFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPF------VFLGLVKSSLRPGFHVAAQNCWVKKGGAFTG 77 (251)
Q Consensus 4 ~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~------~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TG 77 (251)
|-++..++ .+.+++.++++.+.. .. +-+++.. |+ ..+..+++.. +++.+.+ |.-..+. .
T Consensus 2 ~li~a~D~---~~~~~~~~~~~~~~~-~~---diie~G~--p~~~~~g~~~i~~ir~~~-~~~~i~~-~~~~~~~----~ 66 (211)
T 3f4w_A 2 KLQLALDE---LTLPEAMVFMDKVVD-DV---DIIEVGT--PFLIREGVNAIKAIKEKY-PHKEVLA-DAKIMDG----G 66 (211)
T ss_dssp EEEEEECS---CCHHHHHHHHHHHGG-GC---SEEEECH--HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECSC----H
T ss_pred cEEEEeCC---CCHHHHHHHHHHhhc-Cc---cEEEeCc--HHHHhccHHHHHHHHHhC-CCCEEEE-EEEeccc----h
Confidence 44566673 567888888887742 11 1124443 43 2234444432 2445533 3222222 2
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-EeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-CiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
+.-.+.+++.|++++++ |.+- .++.+..-++.+.++|+.+++ +++-+ + ..++++.+++.
T Consensus 67 ~~~~~~~~~~Gad~v~v-~~~~------~~~~~~~~~~~~~~~g~~~~v~~~~~~--------t---~~~~~~~~~~~-- 126 (211)
T 3f4w_A 67 HFESQLLFDAGADYVTV-LGVT------DVLTIQSCIRAAKEAGKQVVVDMICVD--------D---LPARVRLLEEA-- 126 (211)
T ss_dssp HHHHHHHHHTTCSEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEEECTTCS--------S---HHHHHHHHHHH--
T ss_pred HHHHHHHHhcCCCEEEE-eCCC------ChhHHHHHHHHHHHcCCeEEEEecCCC--------C---HHHHHHHHHHc--
Confidence 23489999999999999 6553 234455667777888999886 33321 1 11233333331
Q ss_pred CCCCeEEEEcccCccCCCCC--C-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIVLAYEPVWAIGTGKV--A-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~--a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG 233 (251)
.-.+|.+.|-. +|.. + +.+.+ +.+|+.+ .++||+.+|+|+++|+.+++. .++||+.||
T Consensus 127 --g~d~i~v~~g~---~g~~~~~~~~~~i----~~l~~~~---------~~~~i~~~gGI~~~~~~~~~~-~Gad~vvvG 187 (211)
T 3f4w_A 127 --GADMLAVHTGT---DQQAAGRKPIDDL----ITMLKVR---------RKARIAVAGGISSQTVKDYAL-LGPDVVIVG 187 (211)
T ss_dssp --TCCEEEEECCH---HHHHTTCCSHHHH----HHHHHHC---------SSCEEEEESSCCTTTHHHHHT-TCCSEEEEC
T ss_pred --CCCEEEEcCCC---cccccCCCCHHHH----HHHHHHc---------CCCcEEEECCCCHHHHHHHHH-cCCCEEEEC
Confidence 11235555521 1221 1 23333 3444431 258999999999999988775 689999999
Q ss_pred CccCc
Q 025540 234 GASLK 238 (251)
Q Consensus 234 ~asl~ 238 (251)
++-.+
T Consensus 188 sai~~ 192 (211)
T 3f4w_A 188 SAITH 192 (211)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 98765
No 36
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.60 E-value=0.00038 Score=61.31 Aligned_cols=125 Identities=16% Similarity=0.083 Sum_probs=83.7
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
...++++|++.|++|++-.. +.+.+-+..+.+.||.+++|+-...|. ..++. ...
T Consensus 121 i~~a~~~GAD~VlL~~~~l~-------~~l~~l~~~a~~lGl~~lvev~~~~E~--------------~~a~~----~ga 175 (254)
T 1vc4_A 121 LEEARAFGASAALLIVALLG-------ELTGAYLEEARRLGLEALVEVHTEREL--------------EIALE----AGA 175 (254)
T ss_dssp HHHHHHTTCSEEEEEHHHHG-------GGHHHHHHHHHHHTCEEEEEECSHHHH--------------HHHHH----HTC
T ss_pred HHHHHHcCCCEEEECccchH-------HHHHHHHHHHHHCCCeEEEEECCHHHH--------------HHHHH----cCC
Confidence 36688899999999999442 346666777888999999999854322 12333 123
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc-
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK- 238 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~- 238 (251)
.+|...|+.... ...+.+...++...+... ..+++++-.|+|+ ++++..+.. ++||++||+|-.+
T Consensus 176 d~IGvn~~~l~~--~~~dl~~~~~L~~~i~~~---------~~~~~vIAegGI~s~~dv~~l~~--Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 176 EVLGINNRDLAT--LHINLETAPRLGRLARKR---------GFGGVLVAESGYSRKEELKALEG--LFDAVLIGTSLMRA 242 (254)
T ss_dssp SEEEEESBCTTT--CCBCTTHHHHHHHHHHHT---------TCCSEEEEESCCCSHHHHHTTTT--TCSEEEECHHHHTS
T ss_pred CEEEEccccCcC--CCCCHHHHHHHHHhCccc---------cCCCeEEEEcCCCCHHHHHHHHc--CCCEEEEeHHHcCC
Confidence 467888877542 334455444444333210 1147899999998 888877665 9999999998776
Q ss_pred hHHHH
Q 025540 239 PEFID 243 (251)
Q Consensus 239 ~~F~~ 243 (251)
++-..
T Consensus 243 ~d~~~ 247 (254)
T 1vc4_A 243 PDLEA 247 (254)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 44333
No 37
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.60 E-value=0.0005 Score=58.99 Aligned_cols=123 Identities=12% Similarity=0.071 Sum_probs=80.9
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc-HHHHhcCCcHHHHHHHHHHHHh---ccC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET-LEQREAGSTMDVVAAQTKAIAD---RVS 156 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~-~~~r~~g~~~~~~~~Ql~~~l~---~i~ 156 (251)
.++..+.|+++|.+- .| ++++.+.+-++.+.+.|+.+++-+..+ ..+ .++..+. ..
T Consensus 80 i~~~~~agad~v~vH-~~------~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e------------~~~~~~~~~~~~- 139 (228)
T 1h1y_A 80 VEPLAKAGASGFTFH-IE------VSRDNWQELIQSIKAKGMRPGVSLRPGTPVE------------EVFPLVEAENPV- 139 (228)
T ss_dssp HHHHHHHTCSEEEEE-GG------GCTTTHHHHHHHHHHTTCEEEEEECTTSCGG------------GGHHHHHSSSCC-
T ss_pred HHHHHHcCCCEEEEC-CC------CcccHHHHHHHHHHHcCCCEEEEEeCCCCHH------------HHHHHHhcCCCC-
Confidence 788888999999762 22 122222456677778899998888422 111 1223343 22
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
..|.+=|+..-++|....++-.+. .+.+|+.. .++||.-+|++|++|+.++.. .++||+-+|++-
T Consensus 140 ----d~vl~~sv~pg~~g~~~~~~~l~~-i~~~~~~~---------~~~pi~v~GGI~~~ni~~~~~-aGaD~vvvGsai 204 (228)
T 1h1y_A 140 ----ELVLVMTVEPGFGGQKFMPEMMEK-VRALRKKY---------PSLDIEVDGGLGPSTIDVAAS-AGANCIVAGSSI 204 (228)
T ss_dssp ----SEEEEESSCTTCSSCCCCGGGHHH-HHHHHHHC---------TTSEEEEESSCSTTTHHHHHH-HTCCEEEESHHH
T ss_pred ----CEEEEEeecCCCCcccCCHHHHHH-HHHHHHhc---------CCCCEEEECCcCHHHHHHHHH-cCCCEEEECHHH
Confidence 256666666666676655554443 44555542 258999999999999988765 389999999987
Q ss_pred Cc
Q 025540 237 LK 238 (251)
Q Consensus 237 l~ 238 (251)
.+
T Consensus 205 ~~ 206 (228)
T 1h1y_A 205 FG 206 (228)
T ss_dssp HT
T ss_pred HC
Confidence 75
No 38
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.53 E-value=0.00073 Score=60.29 Aligned_cols=154 Identities=9% Similarity=0.119 Sum_probs=95.4
Q ss_pred ceeEEEcCccc-----cHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHH
Q 025540 37 VVEVVVSPPFV-----FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVG 111 (251)
Q Consensus 37 ~~~v~i~Pp~~-----~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~ 111 (251)
.+.|+--|+|- +|..+.+.+ ++.|-.+|.- +=+.-...++++|++.|+++|+=. +++.+.
T Consensus 95 ~IsVltd~~~f~Gs~~~L~~ir~~v--~lPVl~Kdfi-------~d~~qi~ea~~~GAD~VlLi~a~L------~~~~l~ 159 (272)
T 3tsm_A 95 CLSVLTDTPSFQGAPEFLTAARQAC--SLPALRKDFL-------FDPYQVYEARSWGADCILIIMASV------DDDLAK 159 (272)
T ss_dssp EEEEECCSTTTCCCHHHHHHHHHTS--SSCEEEESCC-------CSTHHHHHHHHTTCSEEEEETTTS------CHHHHH
T ss_pred EEEEeccccccCCCHHHHHHHHHhc--CCCEEECCcc-------CCHHHHHHHHHcCCCEEEEccccc------CHHHHH
Confidence 45565555554 677766654 3444455521 112246678899999999999944 467788
Q ss_pred HHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHH
Q 025540 112 DKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRK 191 (251)
Q Consensus 112 ~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~ 191 (251)
.=+..|.+.||.+++||-... +++.+++ ...-+|..-+.-.- ....+.+... +.++
T Consensus 160 ~l~~~a~~lGl~~lvevh~~e--------------El~~A~~----~ga~iIGinnr~l~--t~~~dl~~~~---~L~~- 215 (272)
T 3tsm_A 160 ELEDTAFALGMDALIEVHDEA--------------EMERALK----LSSRLLGVNNRNLR--SFEVNLAVSE---RLAK- 215 (272)
T ss_dssp HHHHHHHHTTCEEEEEECSHH--------------HHHHHTT----SCCSEEEEECBCTT--TCCBCTHHHH---HHHH-
T ss_pred HHHHHHHHcCCeEEEEeCCHH--------------HHHHHHh----cCCCEEEECCCCCc--cCCCChHHHH---HHHH-
Confidence 888999999999999996432 2223333 23334444443211 1112333333 2222
Q ss_pred HHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 192 WLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 192 ~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+ ..+++++.+|++ +++++ ..+...++||+|||++-.+
T Consensus 216 ~i--------p~~~~vIaesGI~t~edv-~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 216 MA--------PSDRLLVGESGIFTHEDC-LRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp HS--------CTTSEEEEESSCCSHHHH-HHHHTTTCCEEEECHHHHT
T ss_pred hC--------CCCCcEEEECCCCCHHHH-HHHHHcCCCEEEEcHHHcC
Confidence 11 235899999999 55555 5556689999999998776
No 39
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.51 E-value=0.00046 Score=59.65 Aligned_cols=137 Identities=13% Similarity=0.099 Sum_probs=84.7
Q ss_pred cHHHHHhCCCCEEEeCchhhcccccc--ChHHHHHHHHHHHHCCCeEEEEeC-CcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNE--LNEFVGDKVAYALSQGLKVIACVG-ETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~E--td~~i~~Kv~~al~~gl~pIlCiG-E~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
-.++..++|++++.++ .| ..+...+-++.+.+.|+.+.+-+. .|..++ ++..++..
T Consensus 77 ~i~~~~~aGadgv~vh--------~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~------------~~~~~~~~- 135 (230)
T 1tqj_A 77 YVEDFAKAGADIISVH--------VEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDF------------LEYVLPVC- 135 (230)
T ss_dssp THHHHHHHTCSEEEEE--------CSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGG------------GTTTGGGC-
T ss_pred HHHHHHHcCCCEEEEC--------cccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHH------------HHHHHhcC-
Confidence 3689999999999886 22 223455778888899999998883 232222 11223321
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
. .|.+=++...-+|....+ ..-+-.+.+|+.+.+. +.+++|.-+|+||++|+.++.. .++||+-+|++-
T Consensus 136 ---D-~v~~msv~pg~ggq~~~~-~~~~~i~~lr~~~~~~-----~~~~~I~v~GGI~~~~~~~~~~-aGad~vvvGSai 204 (230)
T 1tqj_A 136 ---D-LILIMSVNPGFGGQSFIP-EVLPKIRALRQMCDER-----GLDPWIEVDGGLKPNNTWQVLE-AGANAIVAGSAV 204 (230)
T ss_dssp ---S-EEEEESSCC----CCCCG-GGHHHHHHHHHHHHHH-----TCCCEEEEESSCCTTTTHHHHH-HTCCEEEESHHH
T ss_pred ---C-EEEEEEeccccCCccCcH-HHHHHHHHHHHHHHhc-----CCCCcEEEECCcCHHHHHHHHH-cCCCEEEECHHH
Confidence 2 454555554433444333 2233344556554321 2358999999999999988754 689999999997
Q ss_pred Cc-hHHHHHHHHH
Q 025540 237 LK-PEFIDIIKSA 248 (251)
Q Consensus 237 l~-~~F~~Ii~~~ 248 (251)
.+ ++..+-++.+
T Consensus 205 ~~a~d~~~~~~~l 217 (230)
T 1tqj_A 205 FNAPNYAEAIAGV 217 (230)
T ss_dssp HTSSCHHHHHHHH
T ss_pred HCCCCHHHHHHHH
Confidence 76 4554444443
No 40
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.50 E-value=0.00026 Score=62.99 Aligned_cols=123 Identities=12% Similarity=0.122 Sum_probs=74.6
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI-ACVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
|--.+.+++.|++.+|+. -.-+.|.+ .-...+.++|+.+| +|--.|.++| ++.+.+.
T Consensus 113 e~f~~~~~~aGvdgvii~----Dlp~ee~~----~~~~~~~~~gl~~i~liaP~t~~er------------i~~i~~~-- 170 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIA----DVPVEESA----PFSKAAKAHGIAPIFIAPPNADADT------------LKMVSEQ-- 170 (267)
T ss_dssp HHHHHHHHHHTCCEEEET----TSCGGGCH----HHHHHHHHTTCEEECEECTTCCHHH------------HHHHHHH--
T ss_pred HHHHHHHHHcCCCEEEeC----CCCHhhHH----HHHHHHHHcCCeEEEEECCCCCHHH------------HHHHHHh--
Confidence 445789999999999994 22233443 56777889999988 6655554444 3333332
Q ss_pred CCCCeEEEEcccCccC-CCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIVLAYEPVWAIG-TGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIG-tG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG 233 (251)
...+ |-| .. ..| ||... .++.+.+.++.+|+. .++||++||+|+ ++++.+.+. .+.||+.||
T Consensus 171 -~~gf-vY~-vS-~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~pv~vGfGI~~~e~~~~~~~-~gADgvVVG 235 (267)
T 3vnd_A 171 -GEGY-TYL-LS-RAGVTGTESKAGEPIENILTQLAEF----------NAPPPLLGFGIAEPEQVRAAIK-AGAAGAISG 235 (267)
T ss_dssp -CCSC-EEE-SC-CCCCC--------CHHHHHHHHHTT----------TCCCEEECSSCCSHHHHHHHHH-TTCSEEEEC
T ss_pred -CCCc-EEE-Ee-cCCCCCCccCCcHHHHHHHHHHHHh----------cCCCEEEECCcCCHHHHHHHHH-cCCCEEEEC
Confidence 1122 333 21 233 66553 355566677777653 248999999996 777763333 589999999
Q ss_pred CccC
Q 025540 234 GASL 237 (251)
Q Consensus 234 ~asl 237 (251)
+|-.
T Consensus 236 Saiv 239 (267)
T 3vnd_A 236 SAVV 239 (267)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8743
No 41
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.48 E-value=0.0029 Score=53.77 Aligned_cols=175 Identities=14% Similarity=0.149 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHhhccCCCCCCceeEEEcCccc-----cHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCC
Q 025540 15 GTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFV-----FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEI 89 (251)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~-----~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~ 89 (251)
.+.+++.++++.+... . +-+++.+ |++. .+..+++.. ++..+.. |++..+.+ +.-.+++.++|+
T Consensus 16 ~~~~~~~~~~~~~~~~-v---d~ie~g~-~~~~~~G~~~i~~lr~~~-~~~~i~l-d~~l~d~p----~~~~~~~~~aGa 84 (218)
T 3jr2_A 16 TNLTDAVAVASNVASY-V---DVIEVGT-ILAFAEGMKAVSTLRHNH-PNHILVC-DMKTTDGG----AILSRMAFEAGA 84 (218)
T ss_dssp SSHHHHHHHHHHHGGG-C---SEEEECH-HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECSCH----HHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhcCC-c---eEEEeCc-HHHHhcCHHHHHHHHHhC-CCCcEEE-EEeecccH----HHHHHHHHhcCC
Confidence 5678888888876431 1 2345543 4322 233344332 2223332 56655443 446799999999
Q ss_pred CEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-EeCCcHHHHhcCCcHHHHHHHHHHHHh-ccCCCCCeE--EEE
Q 025540 90 PWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIV--LAY 165 (251)
Q Consensus 90 ~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-CiGE~~~~r~~g~~~~~~~~Ql~~~l~-~i~~~~~~i--IAY 165 (251)
+++.+ |.|-. ++.+.+-++.+.++|+.+++ ++|=...+ ++..+.+ ++ .-++ .+|
T Consensus 85 d~i~v-h~~~~------~~~~~~~~~~~~~~g~~~~~d~l~~~T~~------------~~~~~~~~g~---d~v~~~~~~ 142 (218)
T 3jr2_A 85 DWITV-SAAAH------IATIAACKKVADELNGEIQIEIYGNWTMQ------------DAKAWVDLGI---TQAIYHRSR 142 (218)
T ss_dssp SEEEE-ETTSC------HHHHHHHHHHHHHHTCEEEEECCSSCCHH------------HHHHHHHTTC---CEEEEECCH
T ss_pred CEEEE-ecCCC------HHHHHHHHHHHHHhCCccceeeeecCCHH------------HHHHHHHcCc---cceeeeecc
Confidence 99988 66642 23455666677788999987 77642111 1112222 22 1222 123
Q ss_pred cccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 166 EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 166 EPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.|-- .|...+++.++ .||+... .++||.-+|+|+++|+.++ ...+.|++-||++-.+
T Consensus 143 ~~~~---~g~~~~~~~l~----~i~~~~~--------~~~pi~v~GGI~~~~~~~~-~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 143 DAEL---AGIGWTTDDLD----KMRQLSA--------LGIELSITGGIVPEDIYLF-EGIKTKTFIAGRALAG 199 (218)
T ss_dssp HHHH---HTCCSCHHHHH----HHHHHHH--------TTCEEEEESSCCGGGGGGG-TTSCEEEEEESGGGSH
T ss_pred cccc---CCCcCCHHHHH----HHHHHhC--------CCCCEEEECCCCHHHHHHH-HHcCCCEEEEchhhcC
Confidence 3321 25555666655 4454421 2589999999999999774 4578999999998776
No 42
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.48 E-value=0.0041 Score=53.87 Aligned_cols=178 Identities=15% Similarity=0.057 Sum_probs=101.1
Q ss_pred HHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcc---ccccc--cHHHHHhCCCCEE
Q 025540 18 EEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGA---FTGEI--SAEMLVNLEIPWV 92 (251)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga---~TGei--S~~mLkd~G~~~v 92 (251)
....++++...+. +...+.+.+.-+|..+++.+ ++.+-+++- .+.|. |.+.. ....+.+.|++.|
T Consensus 36 ~~~~~~A~a~~~~------Ga~~i~~~~~~~i~~ir~~v--~~Pvig~~k--~d~~~~~~~I~~~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 36 EIVAAMALAAEQA------GAVAVRIEGIDNLRMTRSLV--SVPIIGIIK--RDLDESPVRITPFLDDVDALAQAGAAII 105 (232)
T ss_dssp HHHHHHHHHHHHT------TCSEEEEESHHHHHHHHTTC--CSCEEEECB--CCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred chHHHHHHHHHHC------CCeEEEECCHHHHHHHHHhc--CCCEEEEEe--ecCCCcceEeCccHHHHHHHHHcCCCEE
Confidence 4445555554442 22233345677777777765 344444543 23333 22222 3577999999999
Q ss_pred EeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEE-----Ecc
Q 025540 93 ILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLA-----YEP 167 (251)
Q Consensus 93 iiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIA-----YEP 167 (251)
+++.+-|.+- + .+..-++.+.+.|+..++.+.... +. +.+.+ ..-.+|. |++
T Consensus 106 ~l~~~~~~~p--~---~l~~~i~~~~~~g~~v~~~v~t~e-ea-------------~~a~~----~Gad~Ig~~~~g~t~ 162 (232)
T 3igs_A 106 AVDGTARQRP--V---AVEALLARIHHHHLLTMADCSSVD-DG-------------LACQR----LGADIIGTTMSGYTT 162 (232)
T ss_dssp EEECCSSCCS--S---CHHHHHHHHHHTTCEEEEECCSHH-HH-------------HHHHH----TTCSEEECTTTTSSS
T ss_pred EECccccCCH--H---HHHHHHHHHHHCCCEEEEeCCCHH-HH-------------HHHHh----CCCCEEEEcCccCCC
Confidence 9999865221 2 233455566677999998876332 21 12222 1111222 333
Q ss_pred cCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCch-----HH
Q 025540 168 VWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLKP-----EF 241 (251)
Q Consensus 168 vWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~~-----~F 241 (251)
.. ....++.+.+.+ +++ . ++|++..|++ +++++.+++.. ++||++||++-.++ .|
T Consensus 163 ~~---~~~~~~~~~i~~----l~~----------~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGsal~~p~~~~~~~ 223 (232)
T 3igs_A 163 PD---TPEEPDLPLVKA----LHD----------A-GCRVIAEGRYNSPALAAEAIRY-GAWAVTVGSAITRLEHICGWY 223 (232)
T ss_dssp SS---CCSSCCHHHHHH----HHH----------T-TCCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHHCHHHHHHHH
T ss_pred CC---CCCCCCHHHHHH----HHh----------c-CCcEEEECCCCCHHHHHHHHHc-CCCEEEEehHhcCHHHHHHHH
Confidence 21 112234433332 221 1 4899999999 58999888875 99999999887762 46
Q ss_pred HHHHHH
Q 025540 242 IDIIKS 247 (251)
Q Consensus 242 ~~Ii~~ 247 (251)
.+.++.
T Consensus 224 ~~~i~~ 229 (232)
T 3igs_A 224 NDALKK 229 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 43
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.38 E-value=0.0017 Score=57.15 Aligned_cols=126 Identities=17% Similarity=0.130 Sum_probs=75.0
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc-HHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET-LEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~-~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
+--.+.+++.|++++++.- -..+.+..-++.+.++|+.+|.-+..+ ..+| ++.+.+.
T Consensus 112 ~~f~~~~~~aG~dgvii~d--------l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~r------------l~~ia~~-- 169 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPD--------LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKR------------IKLICEA-- 169 (262)
T ss_dssp HHHHHHHHHTTCCEEECTT--------CCHHHHHHHHHHHHHTTCEECCEECTTCCHHH------------HHHHHHH--
T ss_pred HHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHH------------HHHHHHh--
Confidence 4446789999999999951 223556677788899999876544432 2222 2222221
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCc
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~a 235 (251)
...++..-...=..|+..+.+++.+.+.++.+|+. .++||.+||+|+ ++++.++.. +.||+.||++
T Consensus 170 -a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~----------~~~pv~vG~GI~t~e~~~~~~~--gADgvIVGSa 236 (262)
T 2ekc_A 170 -ADEMTYFVSVTGTTGAREKLPYERIKKKVEEYREL----------CDKPVVVGFGVSKKEHAREIGS--FADGVVVGSA 236 (262)
T ss_dssp -CSSCEEEESSCC---------CHHHHHHHHHHHHH----------CCSCEEEESSCCSHHHHHHHHT--TSSEEEECHH
T ss_pred -CCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhh----------cCCCEEEeCCCCCHHHHHHHHc--CCCEEEECHH
Confidence 12232211221123333222215666777777764 148999999998 888888544 6999999998
Q ss_pred cCc
Q 025540 236 SLK 238 (251)
Q Consensus 236 sl~ 238 (251)
-.+
T Consensus 237 i~~ 239 (262)
T 2ekc_A 237 LVK 239 (262)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 44
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.24 E-value=0.0014 Score=57.25 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=74.5
Q ss_pred HHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC-cHHHHhcCCcHHHHHHHHHHHHhccCCCCCe
Q 025540 83 MLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE-TLEQREAGSTMDVVAAQTKAIADRVSSWSNI 161 (251)
Q Consensus 83 mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE-~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~ 161 (251)
.+++.|++++++. .++.+.+.+-+..+.++|+..++=+.- +..+ .++.+... . .-
T Consensus 113 ~a~~aGadgv~v~--------d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e------------~~~~~~~~---~-~g 168 (262)
T 1rd5_A 113 KMKEAGVHGLIVP--------DLPYVAAHSLWSEAKNNNLELVLLTTPAIPED------------RMKEITKA---S-EG 168 (262)
T ss_dssp HHHHTTCCEEECT--------TCBTTTHHHHHHHHHHTTCEECEEECTTSCHH------------HHHHHHHH---C-CS
T ss_pred HHHHcCCCEEEEc--------CCChhhHHHHHHHHHHcCCceEEEECCCCCHH------------HHHHHHhc---C-CC
Confidence 3999999999984 222233556667788899986553332 2212 22232221 1 12
Q ss_pred EEEEcccCccC-CCCC-CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 162 VLAYEPVWAIG-TGKV-ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 162 iIAYEPvWAIG-tG~~-a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++.+.++ -| ||.. ..+....+.++.+|+. .++||+.||+|+ ++|+.+++. .+.||+.||++-.+
T Consensus 169 ~v~~~s~--~G~tG~~~~~~~~~~~~i~~v~~~----------~~~pI~vgGGI~~~e~~~~~~~-~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 169 FVYLVSV--NGVTGPRANVNPRVESLIQEVKKV----------TNKPVAVGFGISKPEHVKQIAQ-WGADGVIIGSAMVR 235 (262)
T ss_dssp CEEEECS--SCCBCTTSCBCTHHHHHHHHHHHH----------CSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred eEEEecC--CCCCCCCcCCCchHHHHHHHHHhh----------cCCeEEEECCcCCHHHHHHHHH-cCCCEEEEChHHHh
Confidence 4566775 45 5542 2233344455566653 148999999999 999999776 78999999998554
No 45
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.24 E-value=0.011 Score=50.99 Aligned_cols=150 Identities=13% Similarity=-0.001 Sum_probs=88.3
Q ss_pred cCccccHHHHHhhcCCCceEeeecccccCCcc---ccccc--cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHH
Q 025540 43 SPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGA---FTGEI--SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYA 117 (251)
Q Consensus 43 ~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga---~TGei--S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~a 117 (251)
+.+.-+|..+++.+ ++.+-+++-. +.|. |-+.. ....+.+.|++.|+++.+-|.+- + .+..-++.+
T Consensus 55 ~~~~~~i~~ir~~v--~~Pvig~~k~--~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p--~---~l~~~i~~~ 125 (229)
T 3q58_A 55 IEGIENLRTVRPHL--SVPIIGIIKR--DLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRP--V---DIDSLLTRI 125 (229)
T ss_dssp EESHHHHHHHGGGC--CSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCS--S---CHHHHHHHH
T ss_pred ECCHHHHHHHHHhc--CCCEEEEEee--cCCCCceEeCccHHHHHHHHHcCCCEEEECccccCCh--H---HHHHHHHHH
Confidence 35677777777665 4555555432 3332 33322 35679999999999999865221 2 233455566
Q ss_pred HHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEE-----EcccCccCCCCCCCHHHHHHHHHHHHHH
Q 025540 118 LSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLA-----YEPVWAIGTGKVATPAQAQEVHFELRKW 192 (251)
Q Consensus 118 l~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIA-----YEPvWAIGtG~~a~~e~i~~~~~~IR~~ 192 (251)
.+.|+..+.++....+.+ .+.+ ..-.+|. |++.. ....++. +.+++.
T Consensus 126 ~~~g~~v~~~v~t~eea~--------------~a~~----~Gad~Ig~~~~g~t~~~---~~~~~~~-------~li~~l 177 (229)
T 3q58_A 126 RLHGLLAMADCSTVNEGI--------------SCHQ----KGIEFIGTTLSGYTGPI---TPVEPDL-------AMVTQL 177 (229)
T ss_dssp HHTTCEEEEECSSHHHHH--------------HHHH----TTCSEEECTTTTSSSSC---CCSSCCH-------HHHHHH
T ss_pred HHCCCEEEEecCCHHHHH--------------HHHh----CCCCEEEecCccCCCCC---cCCCCCH-------HHHHHH
Confidence 677999998886432211 2222 1111221 33321 1112233 233433
Q ss_pred HHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 193 LLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 193 l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.. . ++|++-.|++ +++++.+++.. ++||++||++-.+
T Consensus 178 ~~-------~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGsai~~ 215 (229)
T 3q58_A 178 SH-------A-GCRVIAEGRYNTPALAANAIEH-GAWAVTVGSAITR 215 (229)
T ss_dssp HT-------T-TCCEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHC
T ss_pred HH-------c-CCCEEEECCCCCHHHHHHHHHc-CCCEEEEchHhcC
Confidence 21 1 5899999999 58999888875 9999999988776
No 46
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.15 E-value=0.0017 Score=56.15 Aligned_cols=123 Identities=15% Similarity=0.081 Sum_probs=80.5
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
.+++.+.|++++.+ |.|- .+.+.+-++.+.++|+.+.+-+--.... ++++.++..+ .
T Consensus 80 i~~~~~aGad~itv-H~Ea-------~~~~~~~i~~i~~~G~k~gval~p~t~~-----------e~l~~~l~~~----D 136 (228)
T 3ovp_A 80 VKPMAVAGANQYTF-HLEA-------TENPGALIKDIRENGMKVGLAIKPGTSV-----------EYLAPWANQI----D 136 (228)
T ss_dssp HHHHHHHTCSEEEE-EGGG-------CSCHHHHHHHHHHTTCEEEEEECTTSCG-----------GGTGGGGGGC----S
T ss_pred HHHHHHcCCCEEEE-ccCC-------chhHHHHHHHHHHcCCCEEEEEcCCCCH-----------HHHHHHhccC----C
Confidence 67899999999999 6553 2235577788889999998888532111 1222333322 2
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.|.+=.++.-.+|+.-.|+..++ ++.+|+. ..+++|.-.|+|+++|+.++. ..++|++.+|++-.+
T Consensus 137 -~Vl~msv~pGf~Gq~f~~~~l~k-i~~lr~~---------~~~~~I~VdGGI~~~t~~~~~-~aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 137 -MALVMTVEPGFGGQKFMEDMMPK-VHWLRTQ---------FPSLDIEVDGGVGPDTVHKCA-EAGANMIVSGSAIMR 202 (228)
T ss_dssp -EEEEESSCTTTCSCCCCGGGHHH-HHHHHHH---------CTTCEEEEESSCSTTTHHHHH-HHTCCEEEESHHHHT
T ss_pred -eEEEeeecCCCCCcccCHHHHHH-HHHHHHh---------cCCCCEEEeCCcCHHHHHHHH-HcCCCEEEEeHHHhC
Confidence 23343443333677666666554 3344543 134889999999999998765 479999999998665
No 47
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.10 E-value=0.0013 Score=58.51 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=71.0
Q ss_pred ccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-EeCCcHHHHhcCCcHHHHHHHHHHHHhcc
Q 025540 77 GEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CVGETLEQREAGSTMDVVAAQTKAIADRV 155 (251)
Q Consensus 77 GeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-CiGE~~~~r~~g~~~~~~~~Ql~~~l~~i 155 (251)
.+--.+.+++.|++++|+.-. .+.|.. .-++.+.++|+..|+ |--.+..+| ++.+...
T Consensus 108 ~~~f~~~~~~aG~dGviv~Dl----~~ee~~----~~~~~~~~~gl~~i~liap~s~~er------------i~~ia~~- 166 (271)
T 1ujp_A 108 PERFFGLFKQAGATGVILPDL----PPDEDP----GLVRLAQEIGLETVFLLAPTSTDAR------------IATVVRH- 166 (271)
T ss_dssp HHHHHHHHHHHTCCEEECTTC----CGGGCH----HHHHHHHHHTCEEECEECTTCCHHH------------HHHHHTT-
T ss_pred HHHHHHHHHHcCCCEEEecCC----CHHHHH----HHHHHHHHcCCceEEEeCCCCCHHH------------HHHHHHh-
Confidence 355678899999999998632 123333 445667788886554 444443333 2233321
Q ss_pred CCCCCeEEEEcccCccCCCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEc
Q 025540 156 SSWSNIVLAYEPVWAIGTGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 156 ~~~~~~iIAYEPvWAIGtG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG 233 (251)
...++..-...=. ||... .++.+.+.++.+|+. .++||++||+|+ ++++.++ .+.||+.||
T Consensus 167 --~~gfiy~vs~~G~--TG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGI~t~e~a~~~---~~ADgVIVG 229 (271)
T 1ujp_A 167 --ATGFVYAVSVTGV--TGMRERLPEEVKDLVRRIKAR----------TALPVAVGFGVSGKATAAQA---AVADGVVVG 229 (271)
T ss_dssp --CCSCEEEECC--------------CCHHHHHHHHTT----------CCSCEEEESCCCSHHHHHHH---TTSSEEEEC
T ss_pred --CCCCEEEEecCcc--cCCCCCCCccHHHHHHHHHhh----------cCCCEEEEcCCCCHHHHHHh---cCCCEEEEC
Confidence 2233322222112 44432 234445555666642 258999999998 9999996 689999999
Q ss_pred CccCc
Q 025540 234 GASLK 238 (251)
Q Consensus 234 ~asl~ 238 (251)
+|-.+
T Consensus 230 SAi~~ 234 (271)
T 1ujp_A 230 SALVR 234 (271)
T ss_dssp HHHHH
T ss_pred hHHhc
Confidence 98654
No 48
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.08 E-value=0.014 Score=51.31 Aligned_cols=125 Identities=13% Similarity=0.068 Sum_probs=74.9
Q ss_pred ccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc-HHHHhcCCcHHHHHHHHHHHHhcc
Q 025540 77 GEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET-LEQREAGSTMDVVAAQTKAIADRV 155 (251)
Q Consensus 77 GeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~-~~~r~~g~~~~~~~~Ql~~~l~~i 155 (251)
.+--.+.+++.|++++++. . ++.+.+..-++.+.++|+.+++=+..+ ..+| ++.+.+.
T Consensus 111 ~~~~~~~~~~aGadgii~~-d-------~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~------------i~~i~~~- 169 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVA-D-------VPVEESAPFRQAALRHNIAPIFICPPNADDDL------------LRQVASY- 169 (268)
T ss_dssp HHHHHHHHHHHTCCEEEET-T-------CCGGGCHHHHHHHHHTTCEEECEECTTCCHHH------------HHHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEEc-C-------CCHHHHHHHHHHHHHcCCcEEEEECCCCCHHH------------HHHHHhh-
Confidence 3556788999999999983 2 222334466778889999866544432 2222 2223322
Q ss_pred CCCCCeEEEEcccCccC-CCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEE
Q 025540 156 SSWSNIVLAYEPVWAIG-TGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLV 232 (251)
Q Consensus 156 ~~~~~~iIAYEPvWAIG-tG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LV 232 (251)
...++ -+--+ . | ||... .++...+.++.+|+.. ++||..||+|+ ++++.+.+. .+.||+.|
T Consensus 170 --~~g~v-~~~s~-~-G~tG~~~~~~~~~~~~i~~lr~~~----------~~pi~vggGI~t~e~~~~~~~-agAD~vVV 233 (268)
T 1qop_A 170 --GRGYT-YLLSR-S-GVTGAENRGALPLHHLIEKLKEYH----------AAPALQGFGISSPEQVSAAVR-AGAAGAIS 233 (268)
T ss_dssp --CCSCE-EEESS-S-SCCCSSSCC--CCHHHHHHHHHTT----------CCCEEEESSCCSHHHHHHHHH-TTCSEEEE
T ss_pred --CCCcE-EEEec-C-CcCCCccCCCchHHHHHHHHHhcc----------CCcEEEECCCCCHHHHHHHHH-cCCCEEEE
Confidence 12232 22222 1 4 56532 3444445555666531 48999999999 888988433 47999999
Q ss_pred cCccCc
Q 025540 233 GGASLK 238 (251)
Q Consensus 233 G~asl~ 238 (251)
|++-.+
T Consensus 234 GSai~~ 239 (268)
T 1qop_A 234 GSAIVK 239 (268)
T ss_dssp CHHHHH
T ss_pred ChHHhh
Confidence 998543
No 49
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.95 E-value=0.0051 Score=53.65 Aligned_cols=157 Identities=16% Similarity=0.098 Sum_probs=96.7
Q ss_pred CccccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHC---
Q 025540 44 PPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ--- 120 (251)
Q Consensus 44 Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~--- 120 (251)
|-+++=..+.+.++..... |+|.--..+ +.=.+++.++|++++.+ | .|..+.+.+-++.+.+.
T Consensus 54 pn~t~G~~~v~~lr~~~~~---DvhLMv~~p---~~~i~~~~~aGAd~itv-H-------~ea~~~~~~~i~~i~~~~~~ 119 (237)
T 3cu2_A 54 SLFTVGAIGIKYFPTHCFK---DVHLMVRNQ---LEVAKAVVANGANLVTL-Q-------LEQYHDFALTIEWLAKQKTT 119 (237)
T ss_dssp SCBCBCTHHHHTSCTTSEE---EEEEECSCH---HHHHHHHHHTTCSEEEE-E-------TTCTTSHHHHHHHHTTCEEE
T ss_pred cchhhhHHHHHHHhhhCCC---CeEEEEECH---HHHHHHHHHcCCCEEEE-e-------cCCcccHHHHHHHHHhcccc
Confidence 4333334555555533332 888642222 56689999999999754 3 33334466778888889
Q ss_pred ------CCeEEEEeC-CcHHHHhcCCcHHHHHHHHHHHHhccCCCCCe-EEEEcccCccCCCCCCCHHHHHHHHHHHHHH
Q 025540 121 ------GLKVIACVG-ETLEQREAGSTMDVVAAQTKAIADRVSSWSNI-VLAYEPVWAIGTGKVATPAQAQEVHFELRKW 192 (251)
Q Consensus 121 ------gl~pIlCiG-E~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~-iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~ 192 (251)
|+.+.+++. .|..++ ++..++. .+-+ +.+.+|... |++. .+..-+-++.+|+.
T Consensus 120 ~~~~~~g~~~gv~l~p~Tp~~~------------l~~~l~~---~D~vlvMsv~pgfg---gq~f-~~~~l~ki~~lr~~ 180 (237)
T 3cu2_A 120 YANQVYPVLIGACLCPETPISE------------LEPYLDQ---IDVIQLLTLDPRNG---TKYP-SELILDRVIQVEKR 180 (237)
T ss_dssp ETTEEEECEEEEEECTTSCGGG------------GTTTTTT---CSEEEEESEETTTT---EECC-HHHHHHHHHHHHHH
T ss_pred cccccCCceEEEEEeCCChHHH------------HHHHhhc---CceeeeeeeccCcC---Ceec-ChhHHHHHHHHHHH
Confidence 999999883 232221 1222332 2222 246799653 3433 33444445566666
Q ss_pred HHhcCCccccCcceEEEccCCCcccHHHHhc-CCCCCEEEEcCccCc
Q 025540 193 LLANTSPEIAAATRIIYGGSVNGANCKELAA-QPDVDGFLVGGASLK 238 (251)
Q Consensus 193 l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~-~~~vDG~LVG~asl~ 238 (251)
+.+. +.+++|.-.|+||++|+.++.. ..++|++.+|++-.+
T Consensus 181 ~~~~-----~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 181 LGNR-----RVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp HGGG-----GGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred HHhc-----CCCceEEEECCcCHHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 5321 3358899999999999987654 268999999998764
No 50
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.87 E-value=0.0049 Score=53.47 Aligned_cols=133 Identities=23% Similarity=0.278 Sum_probs=83.9
Q ss_pred HHHHHhCCCCEEEeCchhhccccccC-hHHHHHHHHHHHHCCCeEEEEeCC-cHHHHhcCCcHHHHHHHHHHHHhccCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNEL-NEFVGDKVAYALSQGLKVIACVGE-TLEQREAGSTMDVVAAQTKAIADRVSSW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Et-d~~i~~Kv~~al~~gl~pIlCiGE-~~~~r~~g~~~~~~~~Ql~~~l~~i~~~ 158 (251)
.+++.++|++++.+ | .|. ...+.+-++.+.++|+.+.+-+.- |..+ .++.+++.+
T Consensus 73 i~~~~~aGAd~itv-h-------~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~------------~~~~~l~~~--- 129 (231)
T 3ctl_A 73 IAQLARAGADFITL-H-------PETINGQAFRLIDEIRRHDMKVGLILNPETPVE------------AMKYYIHKA--- 129 (231)
T ss_dssp HHHHHHHTCSEEEE-C-------GGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGG------------GGTTTGGGC---
T ss_pred HHHHHHcCCCEEEE-C-------cccCCccHHHHHHHHHHcCCeEEEEEECCCcHH------------HHHHHHhcC---
Confidence 59999999999987 3 344 445677888889999998887732 1111 122333332
Q ss_pred CCe-EEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEc-Ccc
Q 025540 159 SNI-VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG-GAS 236 (251)
Q Consensus 159 ~~~-iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG-~as 236 (251)
.-+ +...+|-.. |+..-++.. +-++.+|+.+.+. +.+++|.-.|+||++|+.++.. .++|++.+| ++-
T Consensus 130 D~VlvmsV~pGfg---gQ~f~~~~l-~kI~~lr~~~~~~-----~~~~~I~VdGGI~~~~~~~~~~-aGAd~~V~G~sai 199 (231)
T 3ctl_A 130 DKITVMTVDPGFA---GQPFIPEML-DKLAELKAWRERE-----GLEYEIEVDGSCNQATYEKLMA-AGADVFIVGTSGL 199 (231)
T ss_dssp SEEEEESSCTTCS---SCCCCTTHH-HHHHHHHHHHHHH-----TCCCEEEEESCCSTTTHHHHHH-HTCCEEEECTTTT
T ss_pred CEEEEeeeccCcC---CccccHHHH-HHHHHHHHHHhcc-----CCCceEEEECCcCHHHHHHHHH-cCCCEEEEccHHH
Confidence 222 245788432 444433322 2334556655321 2358899999999999987754 689999999 887
Q ss_pred Cc-hH-HHHHHH
Q 025540 237 LK-PE-FIDIIK 246 (251)
Q Consensus 237 l~-~~-F~~Ii~ 246 (251)
.+ ++ ..+-++
T Consensus 200 f~~~d~~~~~~~ 211 (231)
T 3ctl_A 200 FNHAENIDEAWR 211 (231)
T ss_dssp GGGCSSHHHHHH
T ss_pred hCCCCcHHHHHH
Confidence 75 34 443333
No 51
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.79 E-value=0.013 Score=49.79 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=79.9
Q ss_pred cHHHHHhCCCCEEEeCch--hhccccccChHHHHHHHHHHHHCCCeEEEEeC-CcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 80 SAEMLVNLEIPWVILGHS--ERRLILNELNEFVGDKVAYALSQGLKVIACVG-ETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHS--ERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiG-E~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
-.+.+.++|++++.++=. +. +. ...-++.+.+.|+..++-+- .|..++ +..+.
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~-----~~---~~~~~~~~~~~g~~ig~~~~p~t~~e~----------------~~~~~ 138 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST-----IH---LHRTINQIKSLGAKAGVVLNPGTPLTA----------------IEYVL 138 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC-----SC---HHHHHHHHHHTTSEEEEEECTTCCGGG----------------GTTTT
T ss_pred HHHHHHHcCCCEEEEEecCccc-----hh---HHHHHHHHHHcCCcEEEEeCCCCCHHH----------------HHHHH
Confidence 567789999999987533 22 12 22445555677888777663 122222 11111
Q ss_pred CCCCeEE---EEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIVL---AYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~iI---AYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG 233 (251)
.... .| ++.|. ++|.+..+.-.+ -.+.+|+.+.+. +.++|+.-+|+|+++|+.+++. .+.||+-||
T Consensus 139 ~~~d-~vl~~~~~pg---~~g~~~~~~~~~-~i~~l~~~~~~~-----~~~~pi~v~GGI~~~n~~~~~~-aGad~vvvg 207 (230)
T 1rpx_A 139 DAVD-LVLIMSVNPG---FGGQSFIESQVK-KISDLRKICAER-----GLNPWIEVDGGVGPKNAYKVIE-AGANALVAG 207 (230)
T ss_dssp TTCS-EEEEESSCTT---CSSCCCCTTHHH-HHHHHHHHHHHH-----TCCCEEEEESSCCTTTHHHHHH-HTCCEEEES
T ss_pred hhCC-EEEEEEEcCC---CCCccccHHHHH-HHHHHHHHHHhc-----CCCceEEEECCCCHHHHHHHHH-cCCCEEEEC
Confidence 1112 34 67773 456655543332 234556554321 2358999999999999999554 589999999
Q ss_pred CccCc-hHHHHHHHHH
Q 025540 234 GASLK-PEFIDIIKSA 248 (251)
Q Consensus 234 ~asl~-~~F~~Ii~~~ 248 (251)
++-.+ ++..+-++.+
T Consensus 208 SaI~~a~dp~~a~~~l 223 (230)
T 1rpx_A 208 SAVFGAPDYAEAIKGI 223 (230)
T ss_dssp HHHHTSSCHHHHHHHH
T ss_pred hhhhCCCCHHHHHHHH
Confidence 99776 4554444433
No 52
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.77 E-value=0.0058 Score=53.67 Aligned_cols=129 Identities=20% Similarity=0.310 Sum_probs=79.8
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC-cHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE-TLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE-~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
.+++.++|++++.+ |.| ..+.+.+-++.+.++|+++-+-+.- |..+ .++.+++.+
T Consensus 102 i~~~~~aGAd~itv-H~E-------a~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e------------~l~~~l~~v---- 157 (246)
T 3inp_A 102 IESFAKAGATSIVF-HPE-------ASEHIDRSLQLIKSFGIQAGLALNPATGID------------CLKYVESNI---- 157 (246)
T ss_dssp HHHHHHHTCSEEEE-CGG-------GCSCHHHHHHHHHTTTSEEEEEECTTCCSG------------GGTTTGGGC----
T ss_pred HHHHHHcCCCEEEE-ccc-------cchhHHHHHHHHHHcCCeEEEEecCCCCHH------------HHHHHHhcC----
Confidence 68899999999988 444 3334667788888999999888862 2111 122333322
Q ss_pred CeE--EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccC
Q 025540 160 NIV--LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 160 ~~i--IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
..+ ..-+|-. +|+.--|+-.++ ++.+|+.+.+. +.+++|.-.|+|+++|+.++ ...++|.+.+|++-.
T Consensus 158 D~VlvMsV~PGf---gGQ~fi~~~l~K-I~~lr~~~~~~-----~~~~~I~VDGGI~~~ti~~~-~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 158 DRVLIMSVNPGF---GGQKFIPAMLDK-AKEISKWISST-----DRDILLEIDGGVNPYNIAEI-AVCGVNAFVAGSAIF 227 (246)
T ss_dssp SEEEEECSCTTC-----CCCCTTHHHH-HHHHHHHHHHH-----TSCCEEEEESSCCTTTHHHH-HTTTCCEEEESHHHH
T ss_pred CEEEEeeecCCC---CCcccchHHHHH-HHHHHHHHHhc-----CCCeeEEEECCcCHHHHHHH-HHcCCCEEEEehHHh
Confidence 222 2335532 455433333332 23445554331 34588999999999999765 458999999999866
Q ss_pred c-hHHHH
Q 025540 238 K-PEFID 243 (251)
Q Consensus 238 ~-~~F~~ 243 (251)
+ ++..+
T Consensus 228 ~a~dp~~ 234 (246)
T 3inp_A 228 NSDSYKQ 234 (246)
T ss_dssp TSSCHHH
T ss_pred CCCCHHH
Confidence 5 44433
No 53
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.76 E-value=0.032 Score=53.04 Aligned_cols=148 Identities=16% Similarity=0.073 Sum_probs=101.1
Q ss_pred cCccccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCC
Q 025540 43 SPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122 (251)
Q Consensus 43 ~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl 122 (251)
-.++.+|..+++.+ ++.+-.+| .. .+.. =...++.+|++.|++-|+-+ +++.+..=+..|.+.||
T Consensus 94 ~gs~~dL~~vr~~v--~lPvLrKD-----FI-~d~~-Qi~ea~~~GAD~ILLi~a~l------~~~~l~~l~~~a~~lgm 158 (452)
T 1pii_A 94 QGSFNFLPIVSQIA--PQPILCKD-----FI-IDPY-QIYLARYYQADACLLMLSVL------DDDQYRQLAAVAHSLEM 158 (452)
T ss_dssp CCCTTHHHHHHHHC--CSCEEEES-----CC-CSHH-HHHHHHHTTCSEEEEETTTC------CHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhc--CCCeEEEe-----cc-CCHH-HHHHHHHcCCCEEEEEcccC------CHHHHHHHHHHHHHcCC
Confidence 36888899988876 45556777 21 1111 23447899999999999954 25678888999999999
Q ss_pred eEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCcccc
Q 025540 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIA 202 (251)
Q Consensus 123 ~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~ 202 (251)
.+++||-...|- +.+++ ...-+|...+.=.... ..+.+...+....| .
T Consensus 159 ~~LvEvh~~eE~--------------~~A~~----lga~iIGinnr~L~t~--~~dl~~~~~L~~~i------------p 206 (452)
T 1pii_A 159 GVLTEVSNEEEQ--------------ERAIA----LGAKVVGINNRDLRDL--SIDLNRTRELAPKL------------G 206 (452)
T ss_dssp EEEEEECSHHHH--------------HHHHH----TTCSEEEEESEETTTT--EECTHHHHHHHHHH------------C
T ss_pred eEEEEeCCHHHH--------------HHHHH----CCCCEEEEeCCCCCCC--CCCHHHHHHHHHhC------------C
Confidence 999999865432 23444 3345677777644332 23444333333222 2
Q ss_pred CcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 203 AATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 203 ~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.++.++-.|+++.......+... +||+|||.+-++
T Consensus 207 ~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 207 HNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp TTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT
T ss_pred CCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 34789999999977777777777 999999998776
No 54
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.74 E-value=0.0059 Score=54.25 Aligned_cols=126 Identities=11% Similarity=-0.005 Sum_probs=76.7
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN 160 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~ 160 (251)
....+++|++.|++|++-= +++.+..=+..+.+.||.+++++-...+ +..+++ ..-
T Consensus 128 v~~A~~~GAD~VlLi~a~l------~~~~l~~l~~~a~~lGl~~lvev~t~ee--------------~~~A~~----~Ga 183 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAAL------EQSVLVSMLDRTESLGMTALVEVHTEQE--------------ADRALK----AGA 183 (272)
T ss_dssp HHHHHHTTCSEEEEEGGGS------CHHHHHHHHHHHHHTTCEEEEEESSHHH--------------HHHHHH----HTC
T ss_pred HHHHHHcCCCEEEEecccC------CHHHHHHHHHHHHHCCCcEEEEcCCHHH--------------HHHHHH----CCC
Confidence 4667789999999999832 2455666678888999999999964321 112222 112
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc-
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK- 238 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~- 238 (251)
.+|.+-|.-. +....+.+.. ++.. ... ..+++++-+|+++ ++|+.++.. .++||++||++-++
T Consensus 184 d~IGv~~r~l--~~~~~dl~~~-------~~l~-~~v----~~~~pvVaegGI~t~edv~~l~~-~GadgvlVGsal~~a 248 (272)
T 3qja_A 184 KVIGVNARDL--MTLDVDRDCF-------ARIA-PGL----PSSVIRIAESGVRGTADLLAYAG-AGADAVLVGEGLVTS 248 (272)
T ss_dssp SEEEEESBCT--TTCCBCTTHH-------HHHG-GGS----CTTSEEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHTC
T ss_pred CEEEECCCcc--cccccCHHHH-------HHHH-HhC----cccCEEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHhCC
Confidence 2445544321 1111223322 2221 111 2358999999999 788776654 68999999998776
Q ss_pred hHHHHHH
Q 025540 239 PEFIDII 245 (251)
Q Consensus 239 ~~F~~Ii 245 (251)
++-...+
T Consensus 249 ~dp~~~~ 255 (272)
T 3qja_A 249 GDPRAAV 255 (272)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 4433333
No 55
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=96.68 E-value=0.015 Score=48.82 Aligned_cols=132 Identities=11% Similarity=0.155 Sum_probs=77.9
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc-HHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET-LEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~-~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
.+.+.++|+++|.++=.+. |.. ..-++.+.+.|+..++-+.-+ ..++ +..+...-
T Consensus 77 i~~~~~~gad~v~vh~~~~-----~~~---~~~~~~~~~~g~~i~~~~~~~t~~e~----------------~~~~~~~~ 132 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST-----RHI---HGALQKIKAAGMKAGVVINPGTPATA----------------LEPLLDLV 132 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC-----SCH---HHHHHHHHHTTSEEEEEECTTSCGGG----------------GGGGTTTC
T ss_pred HHHHHHcCCCEEEEccCcc-----ccH---HHHHHHHHHcCCcEEEEEcCCCCHHH----------------HHHHHhhC
Confidence 5899999999998853332 222 233444556788877766321 1111 11111112
Q ss_pred CeE--EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccC
Q 025540 160 NIV--LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 160 ~~i--IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
..+ .+++|. ++|.+..+.-.+ -.+.+|+...+. +.++||+-.|+++++|+.++.. .+.||+-||++-.
T Consensus 133 d~vl~~~~~~g---~~g~~~~~~~~~-~i~~~~~~~~~~-----~~~~~i~v~GGI~~~~~~~~~~-~Gad~vvvGsai~ 202 (220)
T 2fli_A 133 DQVLIMTVNPG---FGGQAFIPECLE-KVATVAKWRDEK-----GLSFDIEVDGGVDNKTIRACYE-AGANVFVAGSYLF 202 (220)
T ss_dssp SEEEEESSCTT---CSSCCCCGGGHH-HHHHHHHHHHHT-----TCCCEEEEESSCCTTTHHHHHH-HTCCEEEESHHHH
T ss_pred CEEEEEEECCC---CcccccCHHHHH-HHHHHHHHHHhc-----CCCceEEEECcCCHHHHHHHHH-cCCCEEEEChHHh
Confidence 222 256763 456665554333 234556654321 2358899999999999998654 5899999999877
Q ss_pred c-hHHHHHHH
Q 025540 238 K-PEFIDIIK 246 (251)
Q Consensus 238 ~-~~F~~Ii~ 246 (251)
+ ++..+-++
T Consensus 203 ~~~d~~~a~~ 212 (220)
T 2fli_A 203 KASDLVSQVQ 212 (220)
T ss_dssp TSSCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 6 44444333
No 56
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.65 E-value=0.025 Score=49.69 Aligned_cols=134 Identities=15% Similarity=0.126 Sum_probs=76.5
Q ss_pred cCCccccccc---cHHHHHhCC-CCEEEe-CchhhccccccChHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCCcHHH
Q 025540 70 KKGGAFTGEI---SAEMLVNLE-IPWVIL-GHSERRLILNELNEFVGDKVAYALSQGLKVI-ACVGETLEQREAGSTMDV 143 (251)
Q Consensus 70 ~~~Ga~TGei---S~~mLkd~G-~~~vii-GHSERR~~f~Etd~~i~~Kv~~al~~gl~pI-lCiGE~~~~r~~g~~~~~ 143 (251)
...|.|+=+- -+++++++| ..++.+ .+...+..+.|.. .+.+.++..+..|+.++ +|+-.+.+
T Consensus 71 n~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~-~~~~~a~~~~~~g~~vi~~~~~~~~~---------- 139 (264)
T 1xm3_A 71 NTAGASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPV-ETLKASEQLLEEGFIVLPYTSDDVVL---------- 139 (264)
T ss_dssp ECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHH-HHHHHHHHHHHTTCCEEEEECSCHHH----------
T ss_pred CccccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchH-HHHHHHHHHHCCCeEEEEEcCCCHHH----------
Confidence 3345455442 456677774 455422 3444444444433 44455666666699999 77764321
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccCccCCCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHH
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKEL 221 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l 221 (251)
++.+.+ . ....++.+=++ +||+... +++ ..+.+|+. .++||+-||+|+ ++++.++
T Consensus 140 ----a~~~~~-~--gad~v~~~~~~--~Gt~~~~~~~~----~l~~i~~~----------~~iPviv~gGI~t~eda~~~ 196 (264)
T 1xm3_A 140 ----ARKLEE-L--GVHAIMPGASP--IGSGQGILNPL----NLSFIIEQ----------AKVPVIVDAGIGSPKDAAYA 196 (264)
T ss_dssp ----HHHHHH-H--TCSCBEECSSS--TTCCCCCSCHH----HHHHHHHH----------CSSCBEEESCCCSHHHHHHH
T ss_pred ----HHHHHH-h--CCCEEEECCcc--cCCCCCCCCHH----HHHHHHhc----------CCCCEEEEeCCCCHHHHHHH
Confidence 112222 1 12334333332 5665433 333 33444432 258999999996 8898887
Q ss_pred hcCCCCCEEEEcCccCc
Q 025540 222 AAQPDVDGFLVGGASLK 238 (251)
Q Consensus 222 ~~~~~vDG~LVG~asl~ 238 (251)
+. .+.||++||+|-.+
T Consensus 197 ~~-~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 197 ME-LGADGVLLNTAVSG 212 (264)
T ss_dssp HH-TTCSEEEESHHHHT
T ss_pred HH-cCCCEEEEcHHHhC
Confidence 65 68999999998664
No 57
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.60 E-value=0.015 Score=48.28 Aligned_cols=115 Identities=20% Similarity=0.190 Sum_probs=66.2
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
..+.+.++|+++|.+++... ..+. ++... .++.+.+-+. +.++ +. + ....+
T Consensus 78 ~~~~a~~~gad~v~l~~~~~------~~~~----~~~~~-~~~~~~v~~~-t~~e---------~~-~--~~~~g----- 128 (215)
T 1xi3_A 78 RVDVALAVDADGVQLGPEDM------PIEV----AKEIA-PNLIIGASVY-SLEE---------AL-E--AEKKG----- 128 (215)
T ss_dssp CHHHHHHHTCSEEEECTTSC------CHHH----HHHHC-TTSEEEEEES-SHHH---------HH-H--HHHHT-----
T ss_pred hHHHHHHcCCCEEEECCccC------CHHH----HHHhC-CCCEEEEecC-CHHH---------HH-H--HHhcC-----
Confidence 45899999999998876422 1211 22222 5666665453 2211 11 1 11112
Q ss_pred CeEEEEcccCccCCC---CCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 160 NIVLAYEPVWAIGTG---KVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG---~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
-.+|.+-|++--+++ .+...+.++ .+++. .++||+-+|+++++|+.+++. .++||+.||++-
T Consensus 129 ~d~i~~~~~~~~~~~~~~~~~~~~~l~----~l~~~----------~~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i 193 (215)
T 1xi3_A 129 ADYLGAGSVFPTKTKEDARVIGLEGLR----KIVES----------VKIPVVAIGGINKDNAREVLK-TGVDGIAVISAV 193 (215)
T ss_dssp CSEEEEECSSCC----CCCCCHHHHHH----HHHHH----------CSSCEEEESSCCTTTHHHHHT-TTCSEEEESHHH
T ss_pred CCEEEEcCCccCCCCCCCCCcCHHHHH----HHHHh----------CCCCEEEECCcCHHHHHHHHH-cCCCEEEEhHHH
Confidence 234566666543332 223333333 23322 148999999999999999876 799999999986
Q ss_pred Cc
Q 025540 237 LK 238 (251)
Q Consensus 237 l~ 238 (251)
++
T Consensus 194 ~~ 195 (215)
T 1xi3_A 194 MG 195 (215)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 58
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.48 E-value=0.28 Score=40.91 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=30.0
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+--|+| +++|+.+++.. ++||+.+|++-.+
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~-Gad~v~vG~al~~ 209 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDL-GVHCSVVGGAITR 209 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHC
T ss_pred CCCEEEecCCCCHHHHHHHHHc-CCCEEEEChHHcC
Confidence 4899999999 99999998874 8999999998665
No 59
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.28 E-value=0.02 Score=48.36 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=49.8
Q ss_pred EEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc-h
Q 025540 162 VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-P 239 (251)
Q Consensus 162 iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~-~ 239 (251)
.|.+-|+..-|++.....+.+.+ +++. .++||+.+|+|+. +|+.+++ ..++||++||++-++ +
T Consensus 170 ~i~~~~~~~~g~~~~~~~~~i~~----l~~~----------~~~pvia~GGi~~~~~~~~~~-~~Ga~~v~vgsal~~~~ 234 (253)
T 1h5y_A 170 EILLTSIDRDGTGLGYDVELIRR----VADS----------VRIPVIASGGAGRVEHFYEAA-AAGADAVLAASLFHFRV 234 (253)
T ss_dssp EEEEEETTTTTTCSCCCHHHHHH----HHHH----------CSSCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTTS
T ss_pred EEEEecccCCCCcCcCCHHHHHH----HHHh----------cCCCEEEeCCCCCHHHHHHHH-HcCCcHHHHHHHHHcCC
Confidence 34555776667766666555443 3322 1489999999995 9999888 479999999998776 2
Q ss_pred -HHHHHHHHH
Q 025540 240 -EFIDIIKSA 248 (251)
Q Consensus 240 -~F~~Ii~~~ 248 (251)
.+.++.+.+
T Consensus 235 ~~~~~~~~~l 244 (253)
T 1h5y_A 235 LSIAQVKRYL 244 (253)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 455555543
No 60
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.83 E-value=0.069 Score=48.00 Aligned_cols=133 Identities=16% Similarity=0.152 Sum_probs=84.5
Q ss_pred cccHHHHHhCCCCEEE----eCch---hhccccccChHHHHHHHHHHHHCCCeEEEEe---CCcHHHHhcCCcH-HHHHH
Q 025540 78 EISAEMLVNLEIPWVI----LGHS---ERRLILNELNEFVGDKVAYALSQGLKVIACV---GETLEQREAGSTM-DVVAA 146 (251)
Q Consensus 78 eiS~~mLkd~G~~~vi----iGHS---ERR~~f~Etd~~i~~Kv~~al~~gl~pIlCi---GE~~~~r~~g~~~-~~~~~ 146 (251)
+.++++..++|++.|= +| + |+ |.-+.+.+=++.|.+.|+..++=+ |.... +.... +.+.+
T Consensus 111 ~~~ve~a~~~GAdaV~vlv~~~-~d~~~~-----~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~---~~~~~~~~v~~ 181 (304)
T 1to3_A 111 KINAQAVKRDGAKALKLLVLWR-SDEDAQ-----QRLNMVKEFNELCHSNGLLSIIEPVVRPPRCG---DKFDREQAIID 181 (304)
T ss_dssp SCCHHHHHHTTCCEEEEEEEEC-TTSCHH-----HHHHHHHHHHHHHHTTTCEEEEEEEECCCSSC---SCCCHHHHHHH
T ss_pred chhHHHHHHcCCCEEEEEEEcC-CCccHH-----HHHHHHHHHHHHHHHcCCcEEEEEECCCCccc---cCCChhHHHHH
Confidence 4899999999999986 55 4 43 344677788889999999866532 22110 11122 44444
Q ss_pred HHHHHHhccCCCCCeEEEEcc-cCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-EEEccCCCc----ccHHH
Q 025540 147 QTKAIADRVSSWSNIVLAYEP-VWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-IIYGGSVNG----ANCKE 220 (251)
Q Consensus 147 Ql~~~l~~i~~~~~~iIAYEP-vWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-ilYGGSV~~----~n~~~ 220 (251)
..+.+.+ +.-.+|-.+| ++ ||| +++...++++... . .-.+| |+--|++++ +|+.+
T Consensus 182 aa~~a~~----lGaD~iKv~~~~~--~~g---~~~~~~~vv~~~~----~------~~~~P~Vv~aGG~~~~~~~~~~~~ 242 (304)
T 1to3_A 182 AAKELGD----SGADLYKVEMPLY--GKG---ARSDLLTASQRLN----G------HINMPWVILSSGVDEKLFPRAVRV 242 (304)
T ss_dssp HHHHHTT----SSCSEEEECCGGG--GCS---CHHHHHHHHHHHH----H------TCCSCEEECCTTSCTTTHHHHHHH
T ss_pred HHHHHHH----cCCCEEEeCCCcC--CCC---CHHHHHHHHHhcc----c------cCCCCeEEEecCCCHHHHHHHHHH
Confidence 3444332 3345777888 67 455 6676666555422 1 12478 888888887 44766
Q ss_pred HhcCCCCCEEEEcCccCch
Q 025540 221 LAAQPDVDGFLVGGASLKP 239 (251)
Q Consensus 221 l~~~~~vDG~LVG~asl~~ 239 (251)
.+. .+++|+.|||+.++.
T Consensus 243 a~~-aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 243 AME-AGASGFLAGRAVWSS 260 (304)
T ss_dssp HHH-TTCCEEEESHHHHGG
T ss_pred HHH-cCCeEEEEehHHhCc
Confidence 665 599999999987643
No 61
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.80 E-value=0.14 Score=42.72 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHhhccCCCCCCceeEEEc-Ccc-ccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCE
Q 025540 14 NGTPEEVKKIVSVLNEGQVPSSDVVEVVVS-PPF-VFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPW 91 (251)
Q Consensus 14 n~~~~~~~~~~~~l~~~~~~~~~~~~v~i~-Pp~-~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~ 91 (251)
..+.++..+.++.+.+.-. +-+++-.- |+. ..+..+.+.+..++.+|+-.+. +-+ ..+...++|+++
T Consensus 15 ~~d~~~~~~~~~~~~~~G~---~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~-------~~~-~i~~a~~~Gad~ 83 (212)
T 2v82_A 15 GITPDEALAHVGAVIDAGF---DAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVL-------KPE-QVDALARMGCQL 83 (212)
T ss_dssp TCCHHHHHHHHHHHHHHTC---CEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCC-------SHH-HHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHHHCCC---CEEEEeCCChhHHHHHHHHHHhCCCCeEEEecccc-------CHH-HHHHHHHcCCCE
Confidence 3456666666666644211 22333221 111 1223333333335777764332 112 588999999999
Q ss_pred EEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCcc
Q 025540 92 VILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAI 171 (251)
Q Consensus 92 viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAI 171 (251)
|.+|+.. .. -++.+.+.|+..++.+. +. +.+. +....+. ..+. ..|.
T Consensus 84 V~~~~~~---------~~---~~~~~~~~g~~~~~g~~-t~---------~e~~---~a~~~G~----d~v~-v~~t--- 130 (212)
T 2v82_A 84 IVTPNIH---------SE---VIRRAVGYGMTVCPGCA-TA---------TEAF---TALEAGA----QALK-IFPS--- 130 (212)
T ss_dssp EECSSCC---------HH---HHHHHHHTTCEEECEEC-SH---------HHHH---HHHHTTC----SEEE-ETTH---
T ss_pred EEeCCCC---------HH---HHHHHHHcCCCEEeecC-CH---------HHHH---HHHHCCC----CEEE-EecC---
Confidence 9877632 11 23456678887765432 21 1111 1111221 2332 2341
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 172 GTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 172 GtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
+ +.. .+.+++... .. ..++||+-.|+|+++|+.+++. .++||+.||++-++
T Consensus 131 --~-~~g-------~~~~~~l~~-~~----~~~ipvia~GGI~~~~i~~~~~-~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 131 --S-AFG-------PQYIKALKA-VL----PSDIAVFAVGGVTPENLAQWID-AGCAGAGLGSDLYR 181 (212)
T ss_dssp --H-HHC-------HHHHHHHHT-TS----CTTCEEEEESSCCTTTHHHHHH-HTCSEEEECTTTCC
T ss_pred --C-CCC-------HHHHHHHHH-hc----cCCCeEEEeCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 1 112 234443322 11 1258999999999999999887 79999999998765
No 62
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=95.30 E-value=0.02 Score=49.68 Aligned_cols=46 Identities=20% Similarity=0.351 Sum_probs=35.2
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHHhc
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSAEL 250 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~~~ 250 (251)
++|+.+||+++.....+-+. .++||+.||+|..+ + -+.++++.+..
T Consensus 180 ~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~v~a~~~ 227 (228)
T 3vzx_A 180 TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKTVAAVKG 227 (228)
T ss_dssp SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHHHHHHHC
T ss_pred CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHHHHHHhc
Confidence 48999999997654444444 59999999999998 4 46778777654
No 63
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=95.04 E-value=0.2 Score=42.02 Aligned_cols=118 Identities=13% Similarity=0.059 Sum_probs=66.0
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
..+.+.+.|+++|-++-.. ++.+.+ +.... |+...+.+. +.++ +..... ..
T Consensus 80 ~~~~a~~~gad~v~l~~~~------~~~~~~----~~~~~-~~~ig~sv~-t~~~-------------~~~a~~----~g 130 (221)
T 1yad_A 80 RVDIALFSTIHRVQLPSGS------FSPKQI----RARFP-HLHIGRSVH-SLEE-------------AVQAEK----ED 130 (221)
T ss_dssp CHHHHHTTTCCEEEECTTS------CCHHHH----HHHCT-TCEEEEEEC-SHHH-------------HHHHHH----TT
T ss_pred hHHHHHHcCCCEEEeCCCc------cCHHHH----HHHCC-CCEEEEEcC-CHHH-------------HHHHHh----CC
Confidence 4688999999999886331 233222 32233 777666664 3221 112222 11
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
-.+|..-|++...+..-..+. ..+.++++... .++||+--|+++++|+.+++. .+.||+.||++-++
T Consensus 131 aD~i~~~~~f~~~~~~g~~~~----~~~~l~~~~~~-------~~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 131 ADYVLFGHVFETDCKKGLEGR----GVSLLSDIKQR-------ISIPVIAIGGMTPDRLRDVKQ-AGADGIAVMSGIFS 197 (221)
T ss_dssp CSEEEEECCC----------C----HHHHHHHHHHH-------CCSCEEEESSCCGGGHHHHHH-TTCSEEEESHHHHT
T ss_pred CCEEEECCccccCCCCCCCCC----CHHHHHHHHHh-------CCCCEEEECCCCHHHHHHHHH-cCCCEEEEhHHhhC
Confidence 224555665432221000111 12334433221 148999999999999999988 69999999998775
No 64
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=94.95 E-value=0.16 Score=42.43 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=30.1
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-+|+|+++|+.+++. .+.||+-||++-++
T Consensus 172 ~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQ-AGADGVSMISAISQ 205 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHH-TTCSEEEESHHHHT
T ss_pred CCCEEEEcCCCHHHHHHHHH-cCCCEEEEhHHhhc
Confidence 38999999999999999876 68999999998764
No 65
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.75 E-value=0.032 Score=47.42 Aligned_cols=71 Identities=17% Similarity=0.187 Sum_probs=50.1
Q ss_pred EEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCc-ccHHHHhcCC--CCCEEEEcCccCc-h
Q 025540 164 AYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNG-ANCKELAAQP--DVDGFLVGGASLK-P 239 (251)
Q Consensus 164 AYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~-~n~~~l~~~~--~vDG~LVG~asl~-~ 239 (251)
-+-++-.=|++.....+.++++. + ..++||++.|+|+. +|+.+++... ++||++||++-+. +
T Consensus 167 ~~~~~~~~~~~~g~~~~~~~~l~----~----------~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~ 232 (244)
T 2y88_A 167 VVTDITKDGTLGGPNLDLLAGVA----D----------RTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARR 232 (244)
T ss_dssp EEEETTTTTTTSCCCHHHHHHHH----T----------TCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTS
T ss_pred EEEecCCccccCCCCHHHHHHHH----H----------hCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCC
Confidence 34455444665555655554332 1 12589999999996 9999988765 9999999999887 4
Q ss_pred -HHHHHHHHH
Q 025540 240 -EFIDIIKSA 248 (251)
Q Consensus 240 -~F~~Ii~~~ 248 (251)
.|.++++.+
T Consensus 233 ~~~~~~~~~~ 242 (244)
T 2y88_A 233 FTLPQALAAV 242 (244)
T ss_dssp SCHHHHHHHT
T ss_pred cCHHHHHHHh
Confidence 687777654
No 66
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=94.66 E-value=0.18 Score=43.00 Aligned_cols=176 Identities=13% Similarity=0.111 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHhhccCCCCCCceeE----EEcCccccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCC
Q 025540 15 GTPEEVKKIVSVLNEGQVPSSDVVEV----VVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIP 90 (251)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~~~~~~~v----~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~ 90 (251)
.+.+++.++++.+.... .-+++ ++.--...+..+++.. ++..+-. |++..+-|.. -..++.++|++
T Consensus 15 ~~~~~a~~~~~~~~~~~----~~ikvg~~lf~~~G~~~v~~l~~~~-p~~~ifl-DlKl~Dip~t----~~~~~~~~Gad 84 (221)
T 3exr_A 15 SNLKGAITAAVSVGNEV----DVIEAGTVCLLQVGSELVEVLRSLF-PDKIIVA-DTKCADAGGT----VAKNNAVRGAD 84 (221)
T ss_dssp SSHHHHHHHHHHHGGGC----SEEEECHHHHHHHCTHHHHHHHHHC-TTSEEEE-EEEECSCHHH----HHHHHHTTTCS
T ss_pred CCHHHHHHHHHhhCCCc----eEEEECHHHHHhcCHHHHHHHHHhC-CCCcEEE-EEEeeccHHH----HHHHHHHcCCC
Confidence 55789999999876421 22333 2111111233443332 1344444 8887766443 44668999999
Q ss_pred EEEeCchhhccccccChHHHHHHHHHHHHCC----CeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHh-ccCCCCCeE--E
Q 025540 91 WVILGHSERRLILNELNEFVGDKVAYALSQG----LKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIV--L 163 (251)
Q Consensus 91 ~viiGHSERR~~f~Etd~~i~~Kv~~al~~g----l~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~-~i~~~~~~i--I 163 (251)
++-+ |.+- .++.+..-++.+.+.| +.-|-|...+..++ ++.+++ + ...++ .
T Consensus 85 ~vtV-H~~~------g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~------------~~~~~~~~---~~~~v~~~ 142 (221)
T 3exr_A 85 WMTC-ICSA------TIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQ------------AQQWLDAG---ISQAIYHQ 142 (221)
T ss_dssp EEEE-ETTS------CHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHH------------HHHHHHTT---CCEEEEEC
T ss_pred EEEE-eccC------CHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHH------------HHHHHcCC---HHHHHHHH
Confidence 9988 8764 2344555555555555 34555666543222 222332 2 12222 2
Q ss_pred EEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 164 AYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 164 AYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
|..+.- .|..++++++.. ||+... .+.+|..-|+|+++|.. .+...+.|.+.||++-.+
T Consensus 143 a~~~~~---~Gvv~s~~e~~~----ir~~~~--------~~~~i~v~gGI~~~~~~-~~~~aGad~~VvG~~I~~ 201 (221)
T 3exr_A 143 SRDALL---AGETWGEKDLNK----VKKLIE--------MGFRVSVTGGLSVDTLK-LFEGVDVFTFIAGRGITE 201 (221)
T ss_dssp CHHHHH---HTCCCCHHHHHH----HHHHHH--------HTCEEEEESSCCGGGGG-GGTTCCCSEEEECHHHHT
T ss_pred HHhcCC---CccccCHHHHHH----HHHhhc--------CCceEEEECCCCHHHHH-HHHHCCCCEEEECchhhC
Confidence 233321 477888888774 454432 24678889999999986 566789999999997654
No 67
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=94.38 E-value=0.65 Score=38.89 Aligned_cols=184 Identities=15% Similarity=0.100 Sum_probs=101.5
Q ss_pred CCCc-eEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEE----cCccccHHHHHhhcCCCceEeeecccccCCccc
Q 025540 1 MGRK-FFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVV----SPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAF 75 (251)
Q Consensus 1 m~r~-~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i----~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~ 75 (251)
|++. .++..++ .+.+++.++++++... . .-+++.. .--...+..+++..+ +..+- =|++..+.
T Consensus 1 ~~~~~~ilalD~---~~~~~~~~~~~~~~~~-v---~~~kv~~~~f~~~G~~~i~~l~~~~p-~~~v~-lD~kl~di--- 68 (216)
T 1q6o_A 1 MSLPMLQVALDN---QTMDSAYETTRLIAEE-V---DIIEVGTILCVGEGVRAVRDLKALYP-HKIVL-ADAKIADA--- 68 (216)
T ss_dssp --CCEEEEEECC---SSHHHHHHHHHHHGGG-C---SEEEECHHHHHHHCTHHHHHHHHHCT-TSEEE-EEEEECSC---
T ss_pred CCcCCeEEEECC---CCHHHHHHHHHHhccc-C---CEEEECHHHHHHhCHHHHHHHHHhCC-CCeEE-EEEEeccc---
Confidence 6553 4566664 4567888888776542 1 1134321 101112334444321 23332 36666653
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-Ee-CCcHHHHhcCCcHHHHHHHHHHHHh
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CV-GETLEQREAGSTMDVVAAQTKAIAD 153 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-Ci-GE~~~~r~~g~~~~~~~~Ql~~~l~ 153 (251)
++...+.+.++|++++-+ |.|-. .+.+..-++.+.+.|..+.+ ++ +-| ... .+++..
T Consensus 69 -p~t~~~~~~~~Gad~itv-h~~~g------~~~l~~~~~~~~~~g~~~~~~ll~~~t-~~~---------~~~l~~--- 127 (216)
T 1q6o_A 69 -GKILSRMCFEANADWVTV-ICCAD------INTAKGALDVAKEFNGDVQIELTGYWT-WEQ---------AQQWRD--- 127 (216)
T ss_dssp -HHHHHHHHHHTTCSEEEE-ETTSC------HHHHHHHHHHHHHTTCEEEEEECSCCC-HHH---------HHHHHH---
T ss_pred -HHHHHHHHHhCCCCEEEE-eccCC------HHHHHHHHHHHHHcCCCceeeeeeCCC-hhh---------HHHHHh---
Confidence 455567899999999876 44432 23455556667778988743 56 433 111 112222
Q ss_pred ccCCCCCeEE-----EEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCC
Q 025540 154 RVSSWSNIVL-----AYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVD 228 (251)
Q Consensus 154 ~i~~~~~~iI-----AYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vD 228 (251)
+. ...+++ ++|| |.+- +++.++ .+|+.+. .+++|+--|+|+++|+.+.+ ..+.|
T Consensus 128 -~~-~~~~vl~~a~~~~~~----G~~g--~~~~i~----~lr~~~~--------~~~~i~v~GGI~~~~~~~~~-~aGad 186 (216)
T 1q6o_A 128 -AG-IGQVVYHRSRDAQAA----GVAW--GEADIT----AIKRLSD--------MGFKVTVTGGLALEDLPLFK-GIPIH 186 (216)
T ss_dssp -TT-CCEEEEECCHHHHHT----TCCC--CHHHHH----HHHHHHH--------TTCEEEEESSCCGGGGGGGT-TSCCS
T ss_pred -cC-cHHHHHHHHHHHHhc----CCCC--CHHHHH----HHHHhcC--------CCCcEEEECCcChhhHHHHH-HcCCC
Confidence 11 122222 3455 3221 566665 4555431 24789999999999997765 67999
Q ss_pred EEEEcCccCc
Q 025540 229 GFLVGGASLK 238 (251)
Q Consensus 229 G~LVG~asl~ 238 (251)
++.||++-.+
T Consensus 187 ~ivvG~~I~~ 196 (216)
T 1q6o_A 187 VFIAGRSIRD 196 (216)
T ss_dssp EEEESHHHHT
T ss_pred EEEEeehhcC
Confidence 9999998765
No 68
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=94.21 E-value=0.034 Score=48.61 Aligned_cols=44 Identities=20% Similarity=0.425 Sum_probs=33.2
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~~~ 248 (251)
++|+++||+|+.....+-+.. ++||+.||+|..+ ++ |.+=++.+
T Consensus 182 ~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~~~v~~~ 227 (240)
T 1viz_A 182 TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFDRALKTVAAV 227 (240)
T ss_dssp SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHHTHHHHH
T ss_pred CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHHHHHHHH
Confidence 589999999997554444555 9999999999998 66 65445544
No 69
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.98 E-value=0.08 Score=47.12 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=29.8
Q ss_pred cceEE--EccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~il--YGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+ ..|+| +++|+.+++. .++||++||++-++
T Consensus 207 ~iPvi~~a~GGI~~~~d~~~~~~-~GadgV~vGsai~~ 243 (305)
T 2nv1_A 207 KLPVVNFAAGGVATPADAALMMQ-LGADGVFVGSGIFK 243 (305)
T ss_dssp SCSSCEEBCSCCCSHHHHHHHHH-TTCSCEEECGGGGG
T ss_pred CCCEEEEeccCCCCHHHHHHHHH-cCCCEEEEcHHHHc
Confidence 47888 89999 8999998886 79999999999885
No 70
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.81 E-value=0.72 Score=38.80 Aligned_cols=34 Identities=26% Similarity=0.488 Sum_probs=30.2
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-.|+|+ ++|+.+++. .++||+.+|++-+.
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~-~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKIND-LGVAGIVVGGAITR 220 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHT-TCCSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHH-CCCCEEEEchHHhC
Confidence 48999999999 999999887 58999999998666
No 71
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.78 E-value=0.29 Score=43.78 Aligned_cols=125 Identities=17% Similarity=0.086 Sum_probs=70.7
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
-.+.+.+.|++.|.++.. +.. .-++.+.+.|+..+.-+.... +. ....+. .-
T Consensus 88 ~~~~~~~~g~d~V~~~~g-------~p~----~~~~~l~~~gi~vi~~v~t~~-~a-------------~~~~~~---Ga 139 (328)
T 2gjl_A 88 YRAAIIEAGIRVVETAGN-------DPG----EHIAEFRRHGVKVIHKCTAVR-HA-------------LKAERL---GV 139 (328)
T ss_dssp HHHHHHHTTCCEEEEEES-------CCH----HHHHHHHHTTCEEEEEESSHH-HH-------------HHHHHT---TC
T ss_pred HHHHHHhcCCCEEEEcCC-------CcH----HHHHHHHHcCCCEEeeCCCHH-HH-------------HHHHHc---CC
Confidence 467788999999998743 222 223444556888776664322 11 111110 11
Q ss_pred CeEEEEcccCccCC-CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccC
Q 025540 160 NIVLAYEPVWAIGT-GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 160 ~~iIAYEPvWAIGt-G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
..++ ++..-+=|. |.. .+. ....+++... .-++||+-.|++ +++|+.+.+. .+.||+.||++-+
T Consensus 140 D~i~-v~g~~~GG~~G~~-~~~----~~~~l~~v~~-------~~~iPviaaGGI~~~~~v~~al~-~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 140 DAVS-IDGFECAGHPGED-DIP----GLVLLPAAAN-------RLRVPIIASGGFADGRGLVAALA-LGADAINMGTRFL 205 (328)
T ss_dssp SEEE-EECTTCSBCCCSS-CCC----HHHHHHHHHT-------TCCSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHH
T ss_pred CEEE-EECCCCCcCCCCc-ccc----HHHHHHHHHH-------hcCCCEEEECCCCCHHHHHHHHH-cCCCEEEECHHHH
Confidence 2232 344333233 332 111 1123343321 125899999999 5789988777 5899999999877
Q ss_pred c-hH------HHHHHH
Q 025540 238 K-PE------FIDIIK 246 (251)
Q Consensus 238 ~-~~------F~~Ii~ 246 (251)
. ++ |.+.+.
T Consensus 206 ~~~e~~~~~~~k~~~~ 221 (328)
T 2gjl_A 206 ATRECPIHPAVKAAIR 221 (328)
T ss_dssp TSSSSCSCHHHHHHHH
T ss_pred cCccccccHHHHHHHH
Confidence 5 33 666553
No 72
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=93.61 E-value=0.038 Score=47.26 Aligned_cols=45 Identities=13% Similarity=0.086 Sum_probs=37.7
Q ss_pred cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHHh
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSAE 249 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~~ 249 (251)
++||+.+|+|+. +|+.+++. .++||++||++-+. + +|.+.++.+.
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~-~Gadgv~vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTCSCHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 589999999995 99999884 89999999999887 4 7777766543
No 73
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.51 E-value=0.092 Score=44.74 Aligned_cols=45 Identities=9% Similarity=0.049 Sum_probs=37.3
Q ss_pred cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHHh
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSAE 249 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~~ 249 (251)
++||+.+|+|+. +++.+++. .++||++||++-+. + +|.++.+.+.
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~-~Gadgv~vgsal~~~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQ-AGAEAALAASVFHFGEIPIPKLKRYLA 243 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHH-CCCHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 489999999995 99999885 79999999999887 4 6777766543
No 74
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.48 E-value=0.13 Score=43.77 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=37.1
Q ss_pred cceEEEccCCCc-ccHHHHhcCC--CCCEEEEcCccCc-h-HHHHHHHH
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQP--DVDGFLVGGASLK-P-EFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~--~vDG~LVG~asl~-~-~F~~Ii~~ 247 (251)
++||+..|+|+. +|+.+++... ++||++||++-+. + .|.++++.
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHH
Confidence 489999999996 9999988766 9999999999887 3 67777664
No 75
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.42 E-value=1.2 Score=36.58 Aligned_cols=169 Identities=17% Similarity=0.132 Sum_probs=90.6
Q ss_pred EEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEcCccc--cHHHHHhhcCCCceEeeecccccCCccccccccHHHHH
Q 025540 8 GGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFV--FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLV 85 (251)
Q Consensus 8 ~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~--~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLk 85 (251)
+...+. .+.+++.++++.+.+.-. +-+++-+-.|.. .+..+++.+...+.+|+=.+... + .+....
T Consensus 13 i~~~~~-~~~~~~~~~~~~~~~~G~---~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~-------~-~~~~a~ 80 (205)
T 1wa3_A 13 VAVLRA-NSVEEAKEKALAVFEGGV---HLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSV-------E-QCRKAV 80 (205)
T ss_dssp EEEECC-SSHHHHHHHHHHHHHTTC---CEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSH-------H-HHHHHH
T ss_pred EEEEec-CCHHHHHHHHHHHHHCCC---CEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCH-------H-HHHHHH
Confidence 444443 357888888887766311 234443333332 13344443322455665332211 1 367778
Q ss_pred hCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEE
Q 025540 86 NLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAY 165 (251)
Q Consensus 86 d~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAY 165 (251)
+.|++|+ +++. |. . .-++.+.+.|+..+.-+. |.+ ++...++ ..-.+|-.
T Consensus 81 ~~Gad~i-v~~~-----~~--~----~~~~~~~~~g~~vi~g~~-t~~-------------e~~~a~~----~Gad~vk~ 130 (205)
T 1wa3_A 81 ESGAEFI-VSPH-----LD--E----EISQFCKEKGVFYMPGVM-TPT-------------ELVKAMK----LGHTILKL 130 (205)
T ss_dssp HHTCSEE-ECSS-----CC--H----HHHHHHHHHTCEEECEEC-SHH-------------HHHHHHH----TTCCEEEE
T ss_pred HcCCCEE-EcCC-----CC--H----HHHHHHHHcCCcEECCcC-CHH-------------HHHHHHH----cCCCEEEE
Confidence 8999999 6654 22 2 234456678877654221 211 1222232 11123333
Q ss_pred cccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 166 EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 166 EPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
-|. ... -.+.+++... .+ .++||+--|+|+++|+.+++. .+.||+.+|++-++
T Consensus 131 ~~~------------~~~-g~~~~~~l~~-~~-----~~~pvia~GGI~~~~~~~~~~-~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 131 FPG------------EVV-GPQFVKAMKG-PF-----PNVKFVPTGGVNLDNVCEWFK-AGVLAVGVGSALVK 183 (205)
T ss_dssp TTH------------HHH-HHHHHHHHHT-TC-----TTCEEEEBSSCCTTTHHHHHH-HTCSCEEECHHHHC
T ss_pred cCc------------ccc-CHHHHHHHHH-hC-----CCCcEEEcCCCCHHHHHHHHH-CCCCEEEECccccC
Confidence 231 111 2345555432 11 258999999999999998875 57999999997554
No 76
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=93.35 E-value=0.043 Score=47.88 Aligned_cols=44 Identities=23% Similarity=0.362 Sum_probs=33.1
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~ 248 (251)
++|+++||+++.....+-+.. +.||+.||+|-.+ + .|.++++.+
T Consensus 186 ~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~~e~v~~v 231 (235)
T 3w01_A 186 ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKALKTVKIK 231 (235)
T ss_dssp SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHHHHTTCC-
T ss_pred CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHHHHHHHHH
Confidence 589999999976555554554 8999999999887 4 566666544
No 77
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.29 E-value=0.64 Score=40.05 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=68.1
Q ss_pred ccHHHHHhCCCCEE--E--eCchhhccccccChHHHHHHHHHHHHCCCeEEEEe---CCcHHHHhcCCcHHHHHHHH-HH
Q 025540 79 ISAEMLVNLEIPWV--I--LGHSERRLILNELNEFVGDKVAYALSQGLKVIACV---GETLEQREAGSTMDVVAAQT-KA 150 (251)
Q Consensus 79 iS~~mLkd~G~~~v--i--iGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCi---GE~~~~r~~g~~~~~~~~Ql-~~ 150 (251)
-..+...+.|++.| . .|....+..+ +.+.+=++.|.+.|+..++-+ |..+ ..+.+.+.+ .++ +.
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~----~~~~~v~~~~~~~g~~viv~~~~~G~~l---~~~~~~~~~-~~~a~~ 174 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAY----RDLGMIAETCEYWGMPLIAMMYPRGKHI---QNERDPELV-AHAARL 174 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHH----HHHHHHHHHHHHHTCCEEEEEEECSTTC---SCTTCHHHH-HHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHH----HHHHHHHHHHHHcCCCEEEEeCCCCccc---CCCCCHhHH-HHHHHH
Confidence 45777889999999 4 4544222221 233344555667799888755 2211 012233322 222 22
Q ss_pred HHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCccc-------HHHHhc
Q 025540 151 IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGAN-------CKELAA 223 (251)
Q Consensus 151 ~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n-------~~~l~~ 223 (251)
+.+ ..-.+|..-| +.+++.++ ++... -.+||+-=|+++++| ..+++
T Consensus 175 a~~----~Gad~i~~~~--------~~~~~~l~-------~i~~~-------~~ipvva~GGi~~~~~~~~~~~~~~~~- 227 (273)
T 2qjg_A 175 GAE----LGADIVKTSY--------TGDIDSFR-------DVVKG-------CPAPVVVAGGPKTNTDEEFLQMIKDAM- 227 (273)
T ss_dssp HHH----TTCSEEEECC--------CSSHHHHH-------HHHHH-------CSSCEEEECCSCCSSHHHHHHHHHHHH-
T ss_pred HHH----cCCCEEEECC--------CCCHHHHH-------HHHHh-------CCCCEEEEeCCCCCCHHHHHHHHHHHH-
Confidence 222 1222444444 13444433 32211 137888888899877 44333
Q ss_pred CCCCCEEEEcCccCc
Q 025540 224 QPDVDGFLVGGASLK 238 (251)
Q Consensus 224 ~~~vDG~LVG~asl~ 238 (251)
..++||+.+|++-++
T Consensus 228 ~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 228 EAGAAGVAVGRNIFQ 242 (273)
T ss_dssp HHTCSEEECCHHHHT
T ss_pred HcCCcEEEeeHHhhC
Confidence 479999999998776
No 78
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.17 E-value=0.27 Score=44.25 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=67.9
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
-.+.+.+.|+++|.++... .. .+ ++...+.|+..+.-+....+. ..+.+ ..
T Consensus 94 ~~~~~~~~g~d~V~l~~g~-------p~-~~---~~~l~~~g~~v~~~v~s~~~a--------------~~a~~----~G 144 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGN-------PT-KY---IRELKENGTKVIPVVASDSLA--------------RMVER----AG 144 (326)
T ss_dssp HHHHHHHTTCSEEEEESSC-------CH-HH---HHHHHHTTCEEEEEESSHHHH--------------HHHHH----TT
T ss_pred HHHHHHHCCCCEEEECCCC-------cH-HH---HHHHHHcCCcEEEEcCCHHHH--------------HHHHH----cC
Confidence 4567778999999986532 22 22 334446788877766432211 12222 11
Q ss_pred CeEEEEcccCccC-CCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccC
Q 025540 160 NIVLAYEPVWAIG-TGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 160 ~~iIAYEPvWAIG-tG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl 237 (251)
-..|.+++.-+=| +|...+.+.+.+ +++. -++||+-.|+++ ++|+.+.+. .+.||+.||++-+
T Consensus 145 aD~i~v~g~~~GG~~G~~~~~~ll~~----i~~~----------~~iPviaaGGI~~~~dv~~al~-~GA~gV~vGs~~~ 209 (326)
T 3bo9_A 145 ADAVIAEGMESGGHIGEVTTFVLVNK----VSRS----------VNIPVIAAGGIADGRGMAAAFA-LGAEAVQMGTRFV 209 (326)
T ss_dssp CSCEEEECTTSSEECCSSCHHHHHHH----HHHH----------CSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHH
T ss_pred CCEEEEECCCCCccCCCccHHHHHHH----HHHH----------cCCCEEEECCCCCHHHHHHHHH-hCCCEEEechHHH
Confidence 1234455544444 254343333332 2221 148999999998 899988876 6899999999766
Q ss_pred c
Q 025540 238 K 238 (251)
Q Consensus 238 ~ 238 (251)
.
T Consensus 210 ~ 210 (326)
T 3bo9_A 210 A 210 (326)
T ss_dssp T
T ss_pred c
Confidence 4
No 79
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.09 E-value=0.51 Score=42.36 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=66.2
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
.++.+.+.|++.|.++-..- . .+ ++...+.|+..++-+. +.++ .+.+.+. .-
T Consensus 80 ~~~~a~~~g~d~V~~~~g~p-------~-~~---i~~l~~~g~~v~~~v~-~~~~-------------a~~~~~~---Ga 131 (332)
T 2z6i_A 80 IVDLVIEEGVKVVTTGAGNP-------S-KY---MERFHEAGIIVIPVVP-SVAL-------------AKRMEKI---GA 131 (332)
T ss_dssp HHHHHHHTTCSEEEECSSCG-------G-GT---HHHHHHTTCEEEEEES-SHHH-------------HHHHHHT---TC
T ss_pred HHHHHHHCCCCEEEECCCCh-------H-HH---HHHHHHcCCeEEEEeC-CHHH-------------HHHHHHc---CC
Confidence 46778899999999975432 1 12 2333356877776563 2211 1122221 11
Q ss_pred CeEEEEcccCccC-CCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccC
Q 025540 160 NIVLAYEPVWAIG-TGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 160 ~~iIAYEPvWAIG-tG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl 237 (251)
. .|..++..+=| +|...+.+.+. .|++. -++||+-.|+++ ++|+.+++. .+.||+.+|++-+
T Consensus 132 D-~i~v~g~~~GG~~g~~~~~~ll~----~i~~~----------~~iPViaaGGI~~~~~~~~al~-~GAdgV~vGs~~l 195 (332)
T 2z6i_A 132 D-AVIAEGMEAGGHIGKLTTMTLVR----QVATA----------ISIPVIAAGGIADGEGAAAGFM-LGAEAVQVGTRFV 195 (332)
T ss_dssp S-CEEEECTTSSEECCSSCHHHHHH----HHHHH----------CSSCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHH
T ss_pred C-EEEEECCCCCCCCCCccHHHHHH----HHHHh----------cCCCEEEECCCCCHHHHHHHHH-cCCCEEEecHHHh
Confidence 2 22234433323 24333333322 33332 248999999998 899988877 5799999999876
Q ss_pred c
Q 025540 238 K 238 (251)
Q Consensus 238 ~ 238 (251)
.
T Consensus 196 ~ 196 (332)
T 2z6i_A 196 V 196 (332)
T ss_dssp T
T ss_pred c
Confidence 5
No 80
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=92.74 E-value=0.16 Score=45.43 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=31.5
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCch
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 239 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~ 239 (251)
.+|+.+||+|+.....+-+...++|++.||++..++
T Consensus 227 ~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 227 DQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp TCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 589999999998877776667899999999999974
No 81
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.71 E-value=1.5 Score=37.36 Aligned_cols=162 Identities=14% Similarity=0.169 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHhhccCCCCCCceeEEEcCc--cccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEE
Q 025540 16 TPEEVKKIVSVLNEGQVPSSDVVEVVVSPP--FVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVI 93 (251)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp--~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~vi 93 (251)
+.+++.+.++.+.+.-. +-+++-.--+ .-.+..+.+.+ ..+.+|+..+-.. -.+++..+.|+++|.
T Consensus 27 ~~~~~~~~~~al~~gGv---~~iel~~k~~~~~~~i~~l~~~~-~~l~vgaGtvl~~--------d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 27 NADDILPLADTLAKNGL---SVAEITFRSEAAADAIRLLRANR-PDFLIAAGTVLTA--------EQVVLAKSSGADFVV 94 (224)
T ss_dssp SGGGHHHHHHHHHHTTC---CEEEEETTSTTHHHHHHHHHHHC-TTCEEEEESCCSH--------HHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHcCC---CEEEEeccCchHHHHHHHHHHhC-cCcEEeeCcEeeH--------HHHHHHHHCCCCEEE
Confidence 44556666666654211 1123322111 11233333433 3577888765422 357889999999998
Q ss_pred eCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCC
Q 025540 94 LGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGT 173 (251)
Q Consensus 94 iGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGt 173 (251)
.|+. |.. -++.|.+.|...+.-+.. .+ ++..+++ ..-.+|.+=|..+.|
T Consensus 95 ~p~~---------d~~---v~~~ar~~g~~~i~Gv~t-~~-------------e~~~A~~----~Gad~vk~Fpa~~~g- 143 (224)
T 1vhc_A 95 TPGL---------NPK---IVKLCQDLNFPITPGVNN-PM-------------AIEIALE----MGISAVKFFPAEASG- 143 (224)
T ss_dssp CSSC---------CHH---HHHHHHHTTCCEECEECS-HH-------------HHHHHHH----TTCCEEEETTTTTTT-
T ss_pred ECCC---------CHH---HHHHHHHhCCCEEeccCC-HH-------------HHHHHHH----CCCCEEEEeeCcccc-
Confidence 7763 322 245777788877663332 11 2222333 223356666622221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 174 GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 174 G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.++ +||++. .. -+++|++==|+|+++|+.+++...+++|+- |++-.+
T Consensus 144 ----G~~-------~lk~l~-~~-----~~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 144 ----GVK-------MIKALL-GP-----YAQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp ----HHH-------HHHHHH-TT-----TTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred ----CHH-------HHHHHH-hh-----CCCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcC
Confidence 133 333322 11 135899999999999999999988999999 777664
No 82
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.41 E-value=2.2 Score=36.06 Aligned_cols=172 Identities=16% Similarity=0.117 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHhhccCCCCCCceeEEEcCc--cccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEE
Q 025540 16 TPEEVKKIVSVLNEGQVPSSDVVEVVVSPP--FVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVI 93 (251)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp--~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~vi 93 (251)
+.+++.+.++.+.+.-. +-+++-.--| .-.+..+.+.+ ..+.+|+..+-.. -.++...+.|++++.
T Consensus 26 ~~~~~~~~~~al~~gGv---~~iel~~k~~~~~~~i~~l~~~~-~~~~vgagtvi~~--------d~~~~A~~aGAd~v~ 93 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGV---RVLNVTLRTECAVDAIRAIAKEV-PEAIVGAGTVLNP--------QQLAEVTEAGAQFAI 93 (214)
T ss_dssp SGGGHHHHHHHHHHTTC---CEEEEESCSTTHHHHHHHHHHHC-TTSEEEEESCCSH--------HHHHHHHHHTCSCEE
T ss_pred CHHHHHHHHHHHHHcCC---CEEEEeCCChhHHHHHHHHHHHC-cCCEEeeCEEEEH--------HHHHHHHHcCCCEEE
Confidence 34556666666554211 1223322111 11223333433 3566777654332 357889999999998
Q ss_pred eCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCC
Q 025540 94 LGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGT 173 (251)
Q Consensus 94 iGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGt 173 (251)
.|+. |. .=++.+.+.|...+.-+-... ++...+. ..-.+|.+=|..+.|
T Consensus 94 ~p~~---------d~---~v~~~~~~~g~~~i~G~~t~~--------------e~~~A~~----~Gad~v~~Fpa~~~g- 142 (214)
T 1wbh_A 94 SPGL---------TE---PLLKAATEGTIPLIPGISTVS--------------ELMLGMD----YGLKEFKFFPAEANG- 142 (214)
T ss_dssp ESSC---------CH---HHHHHHHHSSSCEEEEESSHH--------------HHHHHHH----TTCCEEEETTTTTTT-
T ss_pred cCCC---------CH---HHHHHHHHhCCCEEEecCCHH--------------HHHHHHH----CCCCEEEEecCcccc-
Confidence 8874 22 234666678877665433221 2223333 223355556622221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-----HHHHHHHH
Q 025540 174 GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-----EFIDIIKS 247 (251)
Q Consensus 174 G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-----~F~~Ii~~ 247 (251)
.+ ++||.+. .. -+++|++==|+|+++|+.+++...+++|+- |++-.+ + +|.+|-+.
T Consensus 143 ----G~-------~~lk~i~-~~-----~~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~~~~~~~~~~i~~~ 204 (214)
T 1wbh_A 143 ----GV-------KALQAIA-GP-----FSQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPADALEAGDYDRITKL 204 (214)
T ss_dssp ----HH-------HHHHHHH-TT-----CTTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHHHHHHTCHHHHHHH
T ss_pred ----CH-------HHHHHHh-hh-----CCCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChhhhhcCCHHHHHHH
Confidence 13 3444432 12 235899999999999999999988999999 877665 2 35555544
Q ss_pred H
Q 025540 248 A 248 (251)
Q Consensus 248 ~ 248 (251)
+
T Consensus 205 a 205 (214)
T 1wbh_A 205 A 205 (214)
T ss_dssp H
T ss_pred H
Confidence 3
No 83
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=91.69 E-value=3.4 Score=35.16 Aligned_cols=124 Identities=15% Similarity=0.085 Sum_probs=76.5
Q ss_pred CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhc
Q 025540 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREA 137 (251)
Q Consensus 58 ~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~ 137 (251)
..+.+|+..+-.. -.+++..+.|++++..|+. |. .=++.+.+.|...|.-+....
T Consensus 76 ~~~~igagtvl~~--------d~~~~A~~aGAd~v~~p~~---------d~---~v~~~~~~~g~~~i~G~~t~~----- 130 (225)
T 1mxs_A 76 PELCVGAGTVLDR--------SMFAAVEAAGAQFVVTPGI---------TE---DILEAGVDSEIPLLPGISTPS----- 130 (225)
T ss_dssp TTSEEEEECCCSH--------HHHHHHHHHTCSSEECSSC---------CH---HHHHHHHHCSSCEECEECSHH-----
T ss_pred cccEEeeCeEeeH--------HHHHHHHHCCCCEEEeCCC---------CH---HHHHHHHHhCCCEEEeeCCHH-----
Confidence 3566777655322 3578889999999988763 22 234566678876654332211
Q ss_pred CCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCccc
Q 025540 138 GSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGAN 217 (251)
Q Consensus 138 g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n 217 (251)
++...+. ..-.+|.+=|..+.| -.++||.+. ..+ +++|++==|+|+++|
T Consensus 131 ---------e~~~A~~----~Gad~vk~FPa~~~~------------G~~~lk~i~-~~~-----~~ipvvaiGGI~~~N 179 (225)
T 1mxs_A 131 ---------EIMMGYA----LGYRRFKLFPAEISG------------GVAAIKAFG-GPF-----GDIRFCPTGGVNPAN 179 (225)
T ss_dssp ---------HHHHHHT----TTCCEEEETTHHHHT------------HHHHHHHHH-TTT-----TTCEEEEBSSCCTTT
T ss_pred ---------HHHHHHH----CCCCEEEEccCcccc------------CHHHHHHHH-hhC-----CCCeEEEECCCCHHH
Confidence 2223332 223355555511110 134555432 222 368999999999999
Q ss_pred HHHHhcCCCCCEEEEcCccCc
Q 025540 218 CKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 218 ~~~l~~~~~vDG~LVG~asl~ 238 (251)
+.+++...++||+- |++-.+
T Consensus 180 ~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 180 VRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHhccCCEEEE-EchhcC
Confidence 99999999999999 887665
No 84
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=91.65 E-value=0.068 Score=46.50 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=26.8
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++|+.+||+|+.....+-+.. ++||+.||+|..+
T Consensus 190 ~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 190 KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 223 (234)
T ss_dssp SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 589999999997444444444 9999999999765
No 85
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=91.32 E-value=4.1 Score=34.03 Aligned_cols=41 Identities=15% Similarity=0.060 Sum_probs=33.1
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCchHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 245 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~~F~~Ii 245 (251)
++|++==|+|+++|+.+++. .+.||+-+|++-.+.++.+|-
T Consensus 151 ~ipvvaiGGI~~~n~~~~l~-aGa~~vavgSai~~~d~~~i~ 191 (207)
T 2yw3_A 151 EVRFLPTGGIKEEHLPHYAA-LPNLLAVGGSWLLQGNLEAVR 191 (207)
T ss_dssp TCEEEEBSSCCGGGHHHHHT-CSSBSCEEESGGGSSCHHHHH
T ss_pred CCcEEEeCCCCHHHHHHHHh-CCCcEEEEehhhhCCCHHHHH
Confidence 58999999999999999885 689999999986654444443
No 86
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=91.05 E-value=0.71 Score=41.31 Aligned_cols=152 Identities=11% Similarity=0.146 Sum_probs=79.5
Q ss_pred EcCccccHHHHHhhcCCCceEeeecccccCC-cccccc--------ccHHHHHhCCCCEEEeCc--hhhccccccChHHH
Q 025540 42 VSPPFVFLGLVKSSLRPGFHVAAQNCWVKKG-GAFTGE--------ISAEMLVNLEIPWVILGH--SERRLILNELNEFV 110 (251)
Q Consensus 42 i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~-Ga~TGe--------iS~~mLkd~G~~~viiGH--SERR~~f~Etd~~i 110 (251)
+.|++-.+..+.+... +.+ ++=.... |.|.=. -...+++++|++++.+|= .+- +-|..-
T Consensus 74 lTPS~g~i~~a~~~~~--ipV---~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg-----~iD~~~ 143 (287)
T 3iwp_A 74 TTPSMGVLQVVKQSVQ--IPV---FVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG-----HIDKEL 143 (287)
T ss_dssp BCCCHHHHHHHHTTCC--SCE---EEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----CBCHHH
T ss_pred CCCCHHHHHHHHHhcC--CCe---EEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC-----CcCHHH
Confidence 6677777777766432 221 1111222 323211 257889999999999994 442 344444
Q ss_pred HHHHHHHHHCCCeEEEE--eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCC-HHHHHHHHH
Q 025540 111 GDKVAYALSQGLKVIAC--VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT-PAQAQEVHF 187 (251)
Q Consensus 111 ~~Kv~~al~~gl~pIlC--iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~-~e~i~~~~~ 187 (251)
.+++..+. .++...+- +.+. .+...-.+||... + .+++.- +|..++ ++-+ .
T Consensus 144 ~~~Li~~a-~~l~vTFHRAFD~~-------~d~~~Ale~Li~l--G---vdrILT---------SG~~~~a~~Gl----~ 197 (287)
T 3iwp_A 144 CMSLMAIC-RPLPVTFHRAFDMV-------HDPMAALETLLTL--G---FERVLT---------SGCDSSALEGL----P 197 (287)
T ss_dssp HHHHHHHH-TTSCEEECGGGGGC-------SCHHHHHHHHHHH--T---CSEEEE---------CTTSSSTTTTH----H
T ss_pred HHHHHHHc-CCCcEEEECchhcc-------CCHHHHHHHHHHc--C---CCEEEC---------CCCCCChHHhH----H
Confidence 44544433 34433331 1111 1112222333331 3 233322 343333 3333 3
Q ss_pred HHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcC
Q 025540 188 ELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGG 234 (251)
Q Consensus 188 ~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~ 234 (251)
.||+.+... +..++|+-||+|+++|+.+++...+++-+=..+
T Consensus 198 ~Lk~Lv~~a-----~~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 198 LIKRLIEQA-----KGRIVVMPGGGITDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHHHHH-----TTSSEEEECTTCCTTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHh-----CCCCEEEECCCcCHHHHHHHHHhhCCCEEeECc
Confidence 444443321 346999999999999999998877777655443
No 87
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=91.00 E-value=0.17 Score=43.40 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=29.7
Q ss_pred cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHH
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~ 247 (251)
++||+.+|+|+. +++.+++. .++||++||++-+. + .|.++.+.
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~-~Gadgv~vgsal~~~~~~~~~~~~~ 245 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDMRELKEY 245 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-HTCSEEEESTTTC------------
T ss_pred CCCEEEeCCCCCHHHHHHHHH-cCCHHHHccHHHHcCCCCHHHHHHH
Confidence 589999999995 99988874 79999999999887 4 56665544
No 88
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=90.99 E-value=0.95 Score=39.21 Aligned_cols=69 Identities=12% Similarity=0.005 Sum_probs=44.0
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
-.+|.+=|++.-.|..-+.+-- .+.++++.. .. ..++|++--|+++++|+.+++. .++||+.||++-+.
T Consensus 156 aDyI~vgpvf~T~tK~~~~~~g----l~~l~~~~~-~~----~~~iPvvAiGGI~~~ni~~~~~-aGa~gvav~sai~~ 224 (243)
T 3o63_A 156 ADYFCVGPCWPTPTKPGRAAPG----LGLVRVAAE-LG----GDDKPWFAIGGINAQRLPAVLD-AGARRIVVVRAITS 224 (243)
T ss_dssp CSEEEECCSSCCCC-----CCC----HHHHHHHHT-C-------CCCEEEESSCCTTTHHHHHH-TTCCCEEESHHHHT
T ss_pred CCEEEEcCccCCCCCCCcchhh----HHHHHHHHH-hc----cCCCCEEEecCCCHHHHHHHHH-cCCCEEEEeHHHhC
Confidence 4578888998766543211111 223333321 10 1258999999999999988776 79999999998775
No 89
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=90.91 E-value=0.086 Score=44.90 Aligned_cols=44 Identities=16% Similarity=0.268 Sum_probs=35.3
Q ss_pred cceEEEccCCCc-ccHHHHhcCC----C-CCEEEEcCccCc--hHHHHHHHH
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQP----D-VDGFLVGGASLK--PEFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~----~-vDG~LVG~asl~--~~F~~Ii~~ 247 (251)
++||+.+|+|+. +++.+++... + +||++||+|-+. -++.++.+.
T Consensus 188 ~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 188 EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 489999999995 9999988764 8 999999999886 255555544
No 90
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=90.84 E-value=0.41 Score=42.94 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=27.2
Q ss_pred ceEE--EccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 205 TRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 205 i~il--YGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
+|++ -.|++ +++++.+++. .++||++||++-++
T Consensus 208 iPVivvA~GGI~t~~dv~~~~~-~GAdgVlVGsai~~ 243 (297)
T 4adt_A 208 LPVVNFAAGGIATPADAAMCMQ-LGMDGVFVGSGIFE 243 (297)
T ss_dssp CSSEEEEESCCCSHHHHHHHHH-TTCSCEEESHHHHT
T ss_pred CCeEEEecCCCCCHHHHHHHHH-cCCCEEEEhHHHHc
Confidence 5665 78888 8999988776 48999999998875
No 91
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.61 E-value=2.1 Score=39.15 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=28.0
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-.|+| +++++...+. .+.||+.+|++-+.
T Consensus 207 ~iPVIA~GGI~~~~di~kala-~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALA-VGASSVMIGSILAG 241 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-HTCSEEEESTTTTT
T ss_pred CCeEEEECCCCCHHHHHHHHH-cCCCEEEEChhhhc
Confidence 4899999999 6788877666 48999999998664
No 92
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=90.58 E-value=0.048 Score=46.75 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=0.0
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc-hHH
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK-PEF 241 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~-~~F 241 (251)
++||+..|+|+ ++++.+++.. ++||++||++-+. +++
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~-Gad~v~vg~al~~~p~~ 238 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLR-GADKVSINTAAVENPSL 238 (247)
T ss_dssp ----------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHc-CCcHhhccHHHHcCcHH
Confidence 48999999998 8888888776 7999999999988 653
No 93
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.50 E-value=2.4 Score=38.40 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=32.3
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PE-FIDII 245 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii 245 (251)
++||+..|+| +++.+.+++. ++||+.+|++.+. +. |.++.
T Consensus 197 ~iPVianGgI~s~eda~~~l~--GaD~V~iGRa~l~~P~l~~~i~ 239 (350)
T 3b0p_A 197 QLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEAD 239 (350)
T ss_dssp TSEEEEESSCCSHHHHHHHHT--TSSEEEECHHHHHCGGGGTTHH
T ss_pred CCeEEEECCcCCHHHHHHHHh--CCCEEEECHHHHhCcHHHHHHH
Confidence 5899999998 6788888886 8999999999886 53 44444
No 94
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.70 E-value=1.9 Score=37.63 Aligned_cols=43 Identities=28% Similarity=0.330 Sum_probs=34.6
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~ 247 (251)
++||+..|+| +++++.+++. .+.|++.||++-+. + .|.++.+.
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~-~GAd~V~vg~~~l~~p~~~~~i~~~ 286 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYM-AGASAVAVGTANFADPFVCPKIIDK 286 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHH-HTCSEEEECTHHHHCTTHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHHcCcHHHHHHHHH
Confidence 5899999999 6888888886 57999999999886 4 45555544
No 95
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=88.37 E-value=2.7 Score=35.95 Aligned_cols=127 Identities=16% Similarity=0.105 Sum_probs=75.6
Q ss_pred ccCCccccccccHHHHHhCCCCEEEeCchhhccccccChH-HHHHHHH---HHHHCCCeEEEEeC-CcHHHHhcCCcHHH
Q 025540 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNE-FVGDKVA---YALSQGLKVIACVG-ETLEQREAGSTMDV 143 (251)
Q Consensus 69 ~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~-~i~~Kv~---~al~~gl~pIlCiG-E~~~~r~~g~~~~~ 143 (251)
..+++.|- +.+.+ ++++.+ |.|- .. .+.+-++ .+.+.|+++-+-+. .|..
T Consensus 73 v~dp~~~i-----~~~~~--Ad~itv-H~ea-------~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~---------- 127 (227)
T 1tqx_A 73 VEYPEKYV-----PLLKT--SNQLTF-HFEA-------LNEDTERCIQLAKEIRDNNLWCGISIKPKTDV---------- 127 (227)
T ss_dssp SSCGGGGG-----GGCTT--SSEEEE-EGGG-------GTTCHHHHHHHHHHHHTTTCEEEEEECTTSCG----------
T ss_pred EcCHHHHH-----HHHHh--CCEEEE-eecC-------CccCHHHHHHHHHHHHHcCCeEEEEeCCCCcH----------
Confidence 34566553 22333 676644 4443 32 4566777 88899999988773 1211
Q ss_pred HHHHHHHHHh--ccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHH
Q 025540 144 VAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKEL 221 (251)
Q Consensus 144 ~~~Ql~~~l~--~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l 221 (251)
+.++.+++ .++. =++...+|-. +|+..-|+-.++ ++.+|+.+ .+++|.--|+||++|+.++
T Consensus 128 --~~~~~~l~~g~~D~--VlvmsV~pGf---~gq~f~~~~l~k-i~~lr~~~---------~~~~I~VdGGI~~~ti~~~ 190 (227)
T 1tqx_A 128 --QKLVPILDTNLINT--VLVMTVEPGF---GGQSFMHDMMGK-VSFLRKKY---------KNLNIQVDGGLNIETTEIS 190 (227)
T ss_dssp --GGGHHHHTTTCCSE--EEEESSCTTC---SSCCCCGGGHHH-HHHHHHHC---------TTCEEEEESSCCHHHHHHH
T ss_pred --HHHHHHhhcCCcCE--EEEeeeccCC---CCcccchHHHHH-HHHHHHhc---------cCCeEEEECCCCHHHHHHH
Confidence 12334454 2220 0223566632 355554444332 23455542 1578999999999999876
Q ss_pred hcCCCCCEEEEcCccCc
Q 025540 222 AAQPDVDGFLVGGASLK 238 (251)
Q Consensus 222 ~~~~~vDG~LVG~asl~ 238 (251)
.. .++|.+.+|++-.+
T Consensus 191 ~~-aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 191 AS-HGANIIVAGTSIFN 206 (227)
T ss_dssp HH-HTCCEEEESHHHHT
T ss_pred HH-cCCCEEEEeHHHhC
Confidence 54 78999999998775
No 96
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.12 E-value=0.54 Score=38.68 Aligned_cols=190 Identities=16% Similarity=0.136 Sum_probs=99.4
Q ss_pred ceEEEEecccCCCHHHHHHHHHHhhccCCCCCCceeEEEc--Cc--cccHHHHHhhcC-CCceEeeecccccCCcccccc
Q 025540 4 KFFVGGNWKCNGTPEEVKKIVSVLNEGQVPSSDVVEVVVS--PP--FVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGE 78 (251)
Q Consensus 4 ~~~i~~NwKmn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~--Pp--~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGe 78 (251)
+.++...+ .+.+++.++++.+... . .-+++..- -+ ...+..+++.+. .++.+..- ++ + .++
T Consensus 2 ~li~a~d~---~~~~~~~~~~~~~~~~-v---~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~-~~--d----i~~ 67 (207)
T 3ajx_A 2 KLQVAIDL---LSTEAALELAGKVAEY-V---DIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMK-TM--D----AGE 67 (207)
T ss_dssp EEEEEECC---SCHHHHHHHHHHHGGG-C---SEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEE-EC--S----CHH
T ss_pred eEEEEeCC---CCHHHHHHHHHHhhcc-C---CEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEE-ec--C----ccH
Confidence 34555553 4678888888877652 1 22455321 01 112344444331 12333222 11 1 144
Q ss_pred ccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEE-EeCC-cHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 79 ISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA-CVGE-TLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 79 iS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-CiGE-~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
.-.+.+.++|++++.+ |.+- .++.+..-++.+.+.|+..-+ |..- +.+++ .+++... +.
T Consensus 68 ~~~~~a~~~Gad~v~v-h~~~------~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~---------~~~~~~~--g~- 128 (207)
T 3ajx_A 68 LEADIAFKAGADLVTV-LGSA------DDSTIAGAVKAAQAHNKGVVVDLIGIEDKATR---------AQEVRAL--GA- 128 (207)
T ss_dssp HHHHHHHHTTCSEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHH---------HHHHHHT--TC-
T ss_pred HHHHHHHhCCCCEEEE-eccC------ChHHHHHHHHHHHHcCCceEEEEecCCChHHH---------HHHHHHh--CC-
Confidence 5678999999999975 2211 123444444556667887523 4321 11221 1122111 11
Q ss_pred CCCCeE---EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEc
Q 025540 157 SWSNIV---LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 157 ~~~~~i---IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG 233 (251)
..+ .++.|.. .|.. +.. +.||+.... ++|+.-.|+|+++|+.+++ ..+.||+-||
T Consensus 129 ---d~v~~~~~~~~~~---~g~~--~~~-----~~i~~~~~~--------~~pi~v~GGI~~~~~~~~~-~aGad~vvvG 186 (207)
T 3ajx_A 129 ---KFVEMHAGLDEQA---KPGF--DLN-----GLLAAGEKA--------RVPFSVAGGVKVATIPAVQ-KAGAEVAVAG 186 (207)
T ss_dssp ---SEEEEECCHHHHT---STTC--CTH-----HHHHHHHHH--------TSCEEEESSCCGGGHHHHH-HTTCSEEEES
T ss_pred ---CEEEEEecccccc---cCCC--chH-----HHHHHhhCC--------CCCEEEECCcCHHHHHHHH-HcCCCEEEEe
Confidence 121 2445432 2322 211 455554321 4789999999999999876 5799999999
Q ss_pred CccCc-hHHHHHHHHH
Q 025540 234 GASLK-PEFIDIIKSA 248 (251)
Q Consensus 234 ~asl~-~~F~~Ii~~~ 248 (251)
++-.+ ++..+.++.+
T Consensus 187 saI~~~~dp~~~~~~~ 202 (207)
T 3ajx_A 187 GAIYGAADPAAAAKEL 202 (207)
T ss_dssp HHHHTSSSHHHHHHHH
T ss_pred eeccCCCCHHHHHHHH
Confidence 99877 4554444443
No 97
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=87.78 E-value=3.9 Score=38.02 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=27.2
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+--|+|. ++++...+. .+.||+.+|++-+-
T Consensus 246 ~IPVIA~GGI~~~~di~kala-lGAd~V~vGt~f~~ 280 (400)
T 3ffs_A 246 GIPIIADGGIRYSGDIGKALA-VGASSVMIGSILAG 280 (400)
T ss_dssp TCCEEEESCCCSHHHHHHHHT-TTCSEEEECGGGTT
T ss_pred CCCEEecCCCCCHHHHHHHHH-cCCCEEEEChHHhc
Confidence 58999999985 677776665 59999999997553
No 98
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.47 E-value=8.1 Score=34.54 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=35.9
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHH-HHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEF-IDIIK 246 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F-~~Ii~ 246 (251)
++||+-+|++ +++.+.+++..-.+|++.+|++.+. ++| .++.+
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 3899999999 7899999998888999999999997 664 44443
No 99
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=87.40 E-value=6.7 Score=34.48 Aligned_cols=124 Identities=19% Similarity=0.149 Sum_probs=69.2
Q ss_pred cHHHHHhCCCCEEEeCchhhccc-------ccc-----------ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHh-----
Q 025540 80 SAEMLVNLEIPWVILGHSERRLI-------LNE-----------LNEFVGDKVAYALSQGLKVIACVGETLEQRE----- 136 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~-------f~E-----------td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~----- 136 (251)
..+.||++|++.|=+.++-.|.. +++ .-+.+.+-+..|.++||.+|+.+-.......
T Consensus 49 ~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~~w~ 128 (358)
T 1ece_A 49 MLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWY 128 (358)
T ss_dssp HHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSC
T ss_pred HHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCc
Confidence 45678999999997777643321 111 2234567789999999999998843100000
Q ss_pred -cCCcHHHHHHHHHHHHhccCCCCCeEEEE----cccCc--cCCCCCCC--HHHHHHHHHHHHHHHHhcCCccccCcceE
Q 025540 137 -AGSTMDVVAAQTKAIADRVSSWSNIVLAY----EPVWA--IGTGKVAT--PAQAQEVHFELRKWLLANTSPEIAAATRI 207 (251)
Q Consensus 137 -~g~~~~~~~~Ql~~~l~~i~~~~~~iIAY----EPvWA--IGtG~~a~--~e~i~~~~~~IR~~l~~~~~~~~~~~i~i 207 (251)
...+.+...+-++.+...... .+-+++| ||.-. -|++.... .+.++++.+.||+. +.+..|
T Consensus 129 ~~~~~~~~~~~~~~~ia~r~~~-~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~---------dp~~~v 198 (358)
T 1ece_A 129 TSSVSEATWISDLQALAQRYKG-NPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSV---------NPNLLI 198 (358)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTT-CTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHH---------CTTSEE
T ss_pred CCCccHHHHHHHHHHHHHHhcC-CCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhh---------CCCeEE
Confidence 012234444444444443322 3456778 55321 12332221 34467788888875 345678
Q ss_pred EEccCC
Q 025540 208 IYGGSV 213 (251)
Q Consensus 208 lYGGSV 213 (251)
++||.-
T Consensus 199 ~v~g~~ 204 (358)
T 1ece_A 199 FVEGVQ 204 (358)
T ss_dssp EEECBS
T ss_pred EECCCc
Confidence 887653
No 100
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=87.10 E-value=0.36 Score=41.15 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=33.2
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~~ 247 (251)
++|++++|+++.-...+.+...++|++.+|++.+. ++ +.++.+.
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~ 124 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQT 124 (247)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHH
Confidence 58999999998755555555678999999999996 65 4455543
No 101
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.94 E-value=0.9 Score=39.14 Aligned_cols=45 Identities=16% Similarity=0.319 Sum_probs=35.4
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH-HHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI-DIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~-~Ii~~~ 248 (251)
.+|+.|||+++.-+..+.+-..++|=+.+|.+.++ ++|. ++++.+
T Consensus 75 ~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~ 121 (243)
T 4gj1_A 75 SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEF 121 (243)
T ss_dssp CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHH
T ss_pred CCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcc
Confidence 38999999998855555555689999999999998 8874 555543
No 102
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=86.27 E-value=0.42 Score=42.77 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=28.2
Q ss_pred cceEEE--ccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIY--GGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilY--GGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+. -|.| +|+++...+ +.++||++||++.++
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~l-e~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLM-QLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHH-HTTCSCEEECGGGGG
T ss_pred CCCEEEecCCCCCCHHHHHHHH-HhCCCEEEEchHHhC
Confidence 477753 4555 899999988 779999999999997
No 103
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=86.12 E-value=2.5 Score=37.58 Aligned_cols=52 Identities=12% Similarity=0.198 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+|+++.++++.++.. ...+++.-=|+|+++|+.+++ ..+||++-||++-..
T Consensus 222 ~~~e~l~~av~~l~~~---------~~~v~ieASGGIt~eni~~~a-~tGVD~IsvGslt~s 273 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDI---------NPNVIVEVSGGITEENVSLYD-FETVDVISSSRLTLQ 273 (285)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTSEEEEEECCCTTTGGGGC-CTTCCEEEEGGGTSS
T ss_pred CCHHHHHHHHHHhhcc---------CCCceEEEECCCCHHHHHHHH-HcCCCEEEEeHHHcC
Confidence 5899999888888753 235899999999999998875 578999999996554
No 104
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=85.58 E-value=11 Score=32.19 Aligned_cols=72 Identities=17% Similarity=0.060 Sum_probs=44.8
Q ss_pred EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-H
Q 025540 163 LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-E 240 (251)
Q Consensus 163 IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-~ 240 (251)
|-|=-+--=||..-++.+.+++ +++. ..++||+|+|+|+.-+.-+-+. ..++|+++|+|=+. . +
T Consensus 168 il~t~Id~DGt~~G~d~~l~~~----l~~~---------~~~ipviasGGv~~~~Dl~~l~-~~~~gvivg~Al~~g~i~ 233 (243)
T 4gj1_A 168 ILCTDISKDGTMQGVNVRLYKL----IHEI---------FPNICIQASGGVASLKDLENLK-GICSGVIVGKALLDGVFS 233 (243)
T ss_dssp EEEEETTC-----CCCHHHHHH----HHHH---------CTTSEEEEESCCCSHHHHHHTT-TTCSEEEECHHHHTTSSC
T ss_pred EEeeeecccccccCCCHHHHHH----HHHh---------cCCCCEEEEcCCCCHHHHHHHH-ccCchhehHHHHHCCCCC
Confidence 3455566778888888776653 3332 1358999999998766555553 45999999998665 2 5
Q ss_pred HHHHHHHH
Q 025540 241 FIDIIKSA 248 (251)
Q Consensus 241 F~~Ii~~~ 248 (251)
+.+.++.+
T Consensus 234 l~ea~~~l 241 (243)
T 4gj1_A 234 VEEGIRCL 241 (243)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666544
No 105
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=85.19 E-value=20 Score=31.93 Aligned_cols=205 Identities=13% Similarity=0.104 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHhhccCCCCCCceeEEEc---Ccccc---HHHHHhhcC-CCceEeeecccccCCccccccccHHHHHhC
Q 025540 15 GTPEEVKKIVSVLNEGQVPSSDVVEVVVS---PPFVF---LGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNL 87 (251)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~~~~~~~v~i~---Pp~~~---L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~ 87 (251)
.+.++..+.++.+.+... ..+-+.-. |+... +..+.+.++ ..+.+. ...|..|-| -.+.|++.
T Consensus 99 ~s~eei~~~~~~~~~~g~---~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~------~t~G~l~~e-~l~~L~~a 168 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGS---TRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEAC------MTLGTLSES-QAQRLANA 168 (369)
T ss_dssp CCHHHHHHHHHHHHHTTC---SEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEE------EECSSCCHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCC---cEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEE------EecCCCCHH-HHHHHHHC
Confidence 356676666665544211 22333222 54433 333333333 344443 245554444 36678899
Q ss_pred CCCEEEeCc-h--hh-cccc-ccChHHHHHHHHHHHHCCCeE----EEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCC-
Q 025540 88 EIPWVILGH-S--ER-RLIL-NELNEFVGDKVAYALSQGLKV----IACVGETLEQREAGSTMDVVAAQTKAIADRVSS- 157 (251)
Q Consensus 88 G~~~viiGH-S--ER-R~~f-~Etd~~i~~Kv~~al~~gl~p----IlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~- 157 (251)
|++.+-+|. | |. +.+- .-+-+.+-+.++.+.+.|+.+ |+=.||+.+++ .+-+.. +..+..
T Consensus 169 Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~---------~~~l~~-l~~l~~~ 238 (369)
T 1r30_A 169 GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDR---------AGLLLQ-LANLPTP 238 (369)
T ss_dssp CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHH---------HHHHHH-HHSSSSC
T ss_pred CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHH---------HHHHHH-HHhhcCC
Confidence 999998763 1 11 1111 235567778888899988843 22235665554 222222 233321
Q ss_pred CCCe-EEEE--cccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCC-cccHHHHhcCCCCCEEEEc
Q 025540 158 WSNI-VLAY--EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVN-GANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 158 ~~~~-iIAY--EPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG 233 (251)
...+ +-.+ +|-.....-.++++++..++.+..|..+... .+++- +|-.+ ..+...+.-..+++|++.|
T Consensus 239 ~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~-------~i~i~-~~~~~l~~~~~~~~l~~Gan~~~~g 310 (369)
T 1r30_A 239 PESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS-------YVRLS-AGREQMNEQTQAMCFMAGANSIFYG 310 (369)
T ss_dssp CSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS-------EEEEE-SSGGGSCHHHHHHHHHHTCCEEECS
T ss_pred CCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC-------ceEee-cchhhcChHHHHHHhhCCCceEEeC
Confidence 1121 1223 3322222223468899999999999876431 24443 33222 1234455566789998887
Q ss_pred CccCc------hHHHHHHHH
Q 025540 234 GASLK------PEFIDIIKS 247 (251)
Q Consensus 234 ~asl~------~~F~~Ii~~ 247 (251)
..-+. ++..++++.
T Consensus 311 ~~~~t~~~~~~~~~~~~i~~ 330 (369)
T 1r30_A 311 CKLLTTPNPEEDKDLQLFRK 330 (369)
T ss_dssp SBSSSSBCCCHHHHHHHHHH
T ss_pred CeeeCCCCCCHHHHHHHHHH
Confidence 64332 345565554
No 106
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=84.52 E-value=0.37 Score=41.32 Aligned_cols=43 Identities=19% Similarity=0.101 Sum_probs=30.5
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccC----c-hHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL----K-PEFIDIIK 246 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl----~-~~F~~Ii~ 246 (251)
++|++.+|.++.....+.+...++||+++|.+.+ + +.+.++++
T Consensus 74 ~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 74 TLPIIASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 5899999999875444555557999999999998 4 34555543
No 107
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=83.62 E-value=1.8 Score=37.65 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=34.4
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc------hH-HHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK------PE-FIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~------~~-F~~Ii~~~ 248 (251)
.+|+.|||+++..++.+++ .++|-+.+|++.++ ++ +.++++.+
T Consensus 76 ~~pv~vgGGir~~~~~~~l--~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 76 PQFLQVGGGINDTNCLEWL--KWASKVIVTSWLFTKEGHFQLKRLERLTELC 125 (260)
T ss_dssp TTTSEEESSCCTTTHHHHT--TTCSCEEECGGGBCTTCCBCHHHHHHHHHHH
T ss_pred CceEEEeCCCCHHHHHHHh--cCCCEEEECcHHHhhcCCCCHHHHHHHHHHh
Confidence 3889999999999888887 89999999999874 43 45555544
No 108
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=83.32 E-value=7.7 Score=33.35 Aligned_cols=52 Identities=6% Similarity=0.001 Sum_probs=39.4
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
..+.+|++|++.|=+.|++.-.+-.+.-+.+.+-+..|.++||.+|+.+-..
T Consensus 36 ~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~ 87 (294)
T 2whl_A 36 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4678999999999888874322222345567788999999999999988643
No 109
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=82.51 E-value=1 Score=36.61 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=34.5
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc--hHHHHHHHHHh
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK--PEFIDIIKSAE 249 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~--~~F~~Ii~~~~ 249 (251)
++|++.+|+++ +++..+.+. .++||+++|+|-+. .+|.++.+.+.
T Consensus 174 ~~Pvia~~g~~~~~~~~~~~~-~G~~~~~vg~a~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 174 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDVRELKEYLK 221 (237)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-HTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CCCEEecCCCCCHHHHHHHHH-cCcHHHhhhHHHHcCCCCHHHHHHHHH
Confidence 58888887776 677777775 78999999998765 36777766543
No 110
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=82.37 E-value=22 Score=30.22 Aligned_cols=172 Identities=18% Similarity=0.215 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHhhccCCCCCCceeEEEcC--ccccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEE
Q 025540 15 GTPEEVKKIVSVLNEGQVPSSDVVEVVVSP--PFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWV 92 (251)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~~~~~~~v~i~P--p~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~v 92 (251)
.+.+++...++.+.+.-. .-+|+-+-- +.-.+..+++.+ ....|||= ...=--.+++..+.|++++
T Consensus 22 ~~~~~a~~~a~al~~gGi---~~iEvt~~t~~a~~~I~~l~~~~-p~~~IGAG--------TVlt~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGV---HLLEVTLRTEAGLAAISAIKKAV-PEAIVGAG--------TVCTADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTC---CEEEEETTSTTHHHHHHHHHHHC-TTSEEEEE--------CCCSHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCC---CEEEEeCCCccHHHHHHHHHHHC-CCCeEeec--------cccCHHHHHHHHHcCCCEE
Confidence 356788888888766322 234543222 233455555555 45778884 3333456888999999999
Q ss_pred EeCchhhccccccChHHHHHHHHHHHHCCC------eEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEc
Q 025540 93 ILGHSERRLILNELNEFVGDKVAYALSQGL------KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYE 166 (251)
Q Consensus 93 iiGHSERR~~f~Etd~~i~~Kv~~al~~gl------~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYE 166 (251)
+.=|. ++ .-++.|.++|+ ..+==+ -|.+| + ...++ ..-.+|-.=
T Consensus 90 vsP~~---------~~---evi~~~~~~~v~~~~~~~~~PG~-~TptE---------~----~~A~~----~Gad~vK~F 139 (217)
T 3lab_A 90 VSPGL---------TP---ELIEKAKQVKLDGQWQGVFLPGV-ATASE---------V----MIAAQ----AGITQLKCF 139 (217)
T ss_dssp EESSC---------CH---HHHHHHHHHHHHCSCCCEEEEEE-CSHHH---------H----HHHHH----TTCCEEEET
T ss_pred EeCCC---------cH---HHHHHHHHcCCCccCCCeEeCCC-CCHHH---------H----HHHHH----cCCCEEEEC
Confidence 98662 22 23455666676 333322 23322 1 12232 122244444
Q ss_pred ccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h------
Q 025540 167 PVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P------ 239 (251)
Q Consensus 167 PvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~------ 239 (251)
|-...|. + .+||.+. ..+ .+++++==|+|+++|+.+++.... +.+ +||..+. +
T Consensus 140 Pa~~~gG-----~-------~~lkal~-~p~-----p~i~~~ptGGI~~~N~~~~l~aGa-~~~-vgGs~l~~~~~i~~~ 199 (217)
T 3lab_A 140 PASAIGG-----A-------KLLKAWS-GPF-----PDIQFCPTGGISKDNYKEYLGLPN-VIC-AGGSWLTESKLLIEG 199 (217)
T ss_dssp TTTTTTH-----H-------HHHHHHH-TTC-----TTCEEEEBSSCCTTTHHHHHHSTT-BCC-EEESGGGCHHHHHHT
T ss_pred ccccccC-----H-------HHHHHHH-hhh-----cCceEEEeCCCCHHHHHHHHHCCC-EEE-EEChhhcChhHHhcC
Confidence 6433331 2 3444432 222 358999999999999999998664 433 5555453 2
Q ss_pred HHHHHHHHH
Q 025540 240 EFIDIIKSA 248 (251)
Q Consensus 240 ~F~~Ii~~~ 248 (251)
+|.+|-+.+
T Consensus 200 ~~~~i~~~a 208 (217)
T 3lab_A 200 DWNEVTRRA 208 (217)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 465555543
No 111
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=82.21 E-value=0.75 Score=40.97 Aligned_cols=43 Identities=21% Similarity=0.372 Sum_probs=35.0
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIK 246 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~ 246 (251)
++||+..|+| +++.+.+++...++||+.+|++.+. |. |.++.+
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 6899999998 6788888887779999999999887 54 555544
No 112
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=81.93 E-value=13 Score=33.52 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=30.0
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-.|++ +++|+.+++. .+.||+.+|++-+.
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~-~GAd~V~vGs~~~~ 242 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLA-AGADAAQLGTAFLA 242 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHT
T ss_pred CceEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 5899999999 9999999888 57999999998764
No 113
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=81.91 E-value=1.3 Score=42.81 Aligned_cols=72 Identities=11% Similarity=0.045 Sum_probs=50.3
Q ss_pred EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-h-
Q 025540 163 LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-P- 239 (251)
Q Consensus 163 IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~- 239 (251)
|.|-.+-.=|+..-++.+.++++ ++. -++||++.|.| +++.+.+++...++||+++|++-+. +
T Consensus 469 il~t~~~~dG~~~G~d~~li~~l----~~~----------~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~ 534 (555)
T 1jvn_A 469 ILLNCIDKDGSNSGYDLELIEHV----KDA----------VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEF 534 (555)
T ss_dssp EEECCGGGTTTCSCCCHHHHHHH----HHH----------CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSC
T ss_pred EEEeCCCCCCCCCCCCHHHHHHH----HHh----------CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCC
Confidence 45777777787665665544433 222 24899998888 5577777776679999999999887 3
Q ss_pred HHHHHHHHH
Q 025540 240 EFIDIIKSA 248 (251)
Q Consensus 240 ~F~~Ii~~~ 248 (251)
.|.++.+.+
T Consensus 535 ~~~e~~~~l 543 (555)
T 1jvn_A 535 TVNDVKEYL 543 (555)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 577766654
No 114
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=81.88 E-value=0.82 Score=38.70 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=34.9
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~~~ 248 (251)
++|++.+|.+++....+.+...++||+.+|.+.+. ++ +.++.+.+
T Consensus 75 ~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc
Confidence 58999999999666556555678999999999997 54 66666553
No 115
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=81.65 E-value=2.3 Score=37.02 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=44.3
Q ss_pred EEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCc-ccHHHHhcCC-CCCEEEEcCcc--C
Q 025540 162 VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNG-ANCKELAAQP-DVDGFLVGGAS--L 237 (251)
Q Consensus 162 iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~-~n~~~l~~~~-~vDG~LVG~as--l 237 (251)
-|.|=.+=.=|+..-++.+.++++.+.... ..++||+++|.|+. +.+.+++... ++||+++|+|. +
T Consensus 173 ~il~t~i~~dG~~~G~d~eli~~l~~~~~~----------~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~ 242 (260)
T 2agk_A 173 EFLIHAADVEGLCGGIDELLVSKLFEWTKD----------YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIF 242 (260)
T ss_dssp EEEEEC-------CCCCHHHHHHHHHHHTT----------CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGG
T ss_pred EEEEEeeccccCcCCCCHHHHHHHHHhhcc----------cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHc
Confidence 355666666677665666665544322200 11489999999866 6666666554 89999999996 4
Q ss_pred c-h--HHHHHHHHH
Q 025540 238 K-P--EFIDIIKSA 248 (251)
Q Consensus 238 ~-~--~F~~Ii~~~ 248 (251)
. + .|.++++..
T Consensus 243 ~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 243 GGNLVKFEDCCRWN 256 (260)
T ss_dssp TCSSBCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 4 3 466666544
No 116
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=81.59 E-value=9.3 Score=34.47 Aligned_cols=52 Identities=8% Similarity=0.003 Sum_probs=40.0
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
....|++.|++.|=+-|++.-.+-.+.-+.+.+-+..|.++||.+|+.+-..
T Consensus 59 ~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 59 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 6778999999999888875322223345667788999999999999988654
No 117
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=81.38 E-value=12 Score=32.96 Aligned_cols=128 Identities=16% Similarity=0.142 Sum_probs=73.6
Q ss_pred cHHHHHhCCCCEEEeC--chhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCC
Q 025540 80 SAEMLVNLEIPWVILG--HSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS 157 (251)
Q Consensus 80 S~~mLkd~G~~~viiG--HSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~ 157 (251)
..+.+...|++++++- |+- ...+.+..-+..+...|..+++=|-+... .+|+.+++. .
T Consensus 52 ~~e~a~~~GaD~v~lDlEh~~------~~~~~~~~~l~a~~~~~~~~~VRv~~~d~------------~di~~~ld~-g- 111 (287)
T 2v5j_A 52 SAELLAGAGFDWLLIDGEHAP------NNVQTVLTQLQAIAPYPSQPVVRPSWNDP------------VQIKQLLDV-G- 111 (287)
T ss_dssp HHHHHHTSCCSEEEEESSSSS------CCHHHHHHHHHHHTTSSSEEEEECSSSCH------------HHHHHHHHT-T-
T ss_pred HHHHHHhCCCCEEEEeCCCcc------chHHHHHHHHHHHHhcCCCEEEEECCCCH------------HHHHHHHhC-C-
Confidence 4566788999999986 552 23444555455555568889999886431 167777762 1
Q ss_pred CCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHH------------hcCCc------cccCcceE--EEccCCCccc
Q 025540 158 WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLL------------ANTSP------EIAAATRI--IYGGSVNGAN 217 (251)
Q Consensus 158 ~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~------------~~~~~------~~~~~i~i--lYGGSV~~~n 217 (251)
...+++ .+.-|+++++++.+.+|.-.. ..||. ..+++++| +--=----.|
T Consensus 112 a~~Iml----------P~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n 181 (287)
T 2v5j_A 112 TQTLLV----------PMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKN 181 (287)
T ss_dssp CCEEEE----------SCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHT
T ss_pred CCEEEe----------CCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHH
Confidence 222333 367789998888776542110 00100 00011111 1100011258
Q ss_pred HHHHhcCCCCCEEEEcCccC
Q 025540 218 CKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 218 ~~~l~~~~~vDG~LVG~asl 237 (251)
+.+|+..+++||++||..-|
T Consensus 182 ~deIaa~~~vD~l~iG~~DL 201 (287)
T 2v5j_A 182 LPQILDVEGVDGVFIGPADL 201 (287)
T ss_dssp HHHHHTSTTEEEEEECHHHH
T ss_pred HHHHhCcCCCCEEEECHHHH
Confidence 99999989999999998644
No 118
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=80.94 E-value=0.74 Score=40.41 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.0
Q ss_pred cceEE--EccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~il--YGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++|++ -.|+| +++|+.+++. .++||+.||++-++
T Consensus 207 ~~pvi~~a~GGI~~~e~i~~~~~-aGadgvvvGsai~~ 243 (297)
T 2zbt_A 207 RLPVVNFAAGGIATPADAALMMH-LGMDGVFVGSGIFK 243 (297)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHH-TTCSEEEECGGGGG
T ss_pred CCCcEEEeeCCCCCHHHHHHHHH-cCCCEEEEchHHhC
Confidence 46776 88999 9999998877 48999999999884
No 119
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=80.81 E-value=1.2 Score=40.67 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=28.4
Q ss_pred cceEE--EccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~il--YGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+||+ -=|++ +++|+.+++.. ++||++||++.++
T Consensus 240 ~IPVV~VAeGGI~Tpeda~~~l~~-GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 240 RLPVVNFAAGGVATPADAALMMQL-GSDGVFVGSGIFK 276 (330)
T ss_dssp SCSSEEEECSCCCSHHHHHHHHHT-TCSCEEESHHHHT
T ss_pred CCCeEEEEECCCCCHHHHHHHHHc-CcCEEeeHHHHhc
Confidence 47774 46777 79999999886 9999999999874
No 120
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=80.62 E-value=26 Score=29.96 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=36.7
Q ss_pred cccHHHHHhCCCCEEEeCchhhccc-------cccC-hHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLI-------LNEL-NEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~-------f~Et-d~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
+-..+.||++|++.|=+.-+=.+.. ++++ -+.+.+-+..|.++||.+|+.+-..
T Consensus 36 ~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~ 97 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHY 97 (317)
T ss_dssp THHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3356778999999998763321111 1121 3456678899999999999998654
No 121
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=80.44 E-value=22 Score=34.10 Aligned_cols=71 Identities=21% Similarity=0.128 Sum_probs=51.5
Q ss_pred CeEEEEcccCccCCCCCC-----CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcC-------CCC
Q 025540 160 NIVLAYEPVWAIGTGKVA-----TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQ-------PDV 227 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a-----~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~-------~~v 227 (251)
-.+|.+=|+|.-.|...+ .++.++++.+.+++ . ...++|++-=|+++++|+.+++.+ .++
T Consensus 132 aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~----~----~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~Ga 203 (540)
T 3nl6_A 132 VDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALER----N----NAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSL 203 (540)
T ss_dssp CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHH----T----TCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBC
T ss_pred CCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHh----h----ccCCCCEEEEcCCCHHHHHHHHHhhcccccccCc
Confidence 468999999988765443 25666655544432 1 023589999999999999999862 689
Q ss_pred CEEEEcCccCc
Q 025540 228 DGFLVGGASLK 238 (251)
Q Consensus 228 DG~LVG~asl~ 238 (251)
||+-|+++-+.
T Consensus 204 dgvAVvsaI~~ 214 (540)
T 3nl6_A 204 DGICVVSDIIA 214 (540)
T ss_dssp SCEEESHHHHT
T ss_pred eEEEEeHHHhc
Confidence 99999999875
No 122
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=80.23 E-value=6.7 Score=33.84 Aligned_cols=52 Identities=10% Similarity=-0.103 Sum_probs=37.8
Q ss_pred ccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 79 ISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 79 iS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
-..+.||+.|++.|=+.|+..-.+-...-+.+.+-+..|.++||.+|+.+-.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4577899999999988775321111123355678899999999999998853
No 123
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=79.81 E-value=16 Score=33.30 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=28.3
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-.|+| +++++...+.. +.||+.+|++-+.
T Consensus 211 ~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAG 245 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTT
T ss_pred CCeEEEeCCCCCHHHHHHHHHc-CCCEEEEChHhhc
Confidence 5899999999 67888777764 8999999998654
No 124
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=79.67 E-value=29 Score=29.95 Aligned_cols=126 Identities=19% Similarity=0.119 Sum_probs=68.8
Q ss_pred ccccccccHHHHHhCCCCEEEeCchhhccc-------ccc-ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcC-CcHHH
Q 025540 73 GAFTGEISAEMLVNLEIPWVILGHSERRLI-------LNE-LNEFVGDKVAYALSQGLKVIACVGETLEQREAG-STMDV 143 (251)
Q Consensus 73 Ga~TGeiS~~mLkd~G~~~viiGHSERR~~-------f~E-td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g-~~~~~ 143 (251)
|.+.-+-..+.||++|++.|=+.-+=.|.. +++ .-+.+.+-+..|.++||.+|+++-....-.... ...+.
T Consensus 39 ~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~~~~~~~~~~~ 118 (320)
T 3nco_A 39 GVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPV 118 (320)
T ss_dssp SCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHCHHHHHHH
T ss_pred CCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCcccccCcHHHHHH
Confidence 345556678889999999998865433321 111 124556778889999999999987543211111 11122
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccCccCCCCC---CCHH----HHHHHHHHHHHHHHhcCCccccCcceEEEccCC
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV---ATPA----QAQEVHFELRKWLLANTSPEIAAATRIIYGGSV 213 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~---a~~e----~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV 213 (251)
..+-.+.+....... +-+++||+. ..+ .+++ ..+++++.||+. +.+-+|++||.-
T Consensus 119 ~~~~~~~ia~~~~~~-~~vv~~~l~-----NEP~~~~~~~~~~~~~~~~~~~IR~~---------dp~~~i~v~~~~ 180 (320)
T 3nco_A 119 LVEIWKQVAQAFKDY-PDKLFFEIF-----NEPAQNLTPTKWNELYPKVLGEIRKT---------NPSRIVIIDVPN 180 (320)
T ss_dssp HHHHHHHHHHHHTTS-CTTEEEECC-----SCCCTTSCHHHHHHHHHHHHHHHHHH---------CSSCCEEEECSG
T ss_pred HHHHHHHHHHHHcCC-CceEEEEec-----cCCCCCCCHHHHHHHHHHHHHHHHhc---------CCCcEEEECCCC
Confidence 222222222222222 223466541 111 2333 456667777764 345678888753
No 125
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=79.64 E-value=1.4 Score=37.24 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=34.6
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~~~ 248 (251)
++|++.+|.++.-...+.+...++||+.+|.+.+. ++ +.++++.+
T Consensus 74 ~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 74 DIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTF 120 (253)
T ss_dssp CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc
Confidence 58999999998655555555578999999999997 54 67776654
No 126
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=79.59 E-value=3 Score=36.96 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+|+++.++++.++.. ...++|.--|+|+++|+.+++. .+||++-+|+.-..
T Consensus 223 ~~~~~~~~~v~~l~~~---------~~~v~ieaSGGIt~~~i~~~a~-tGVD~isvG~l~~~ 274 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSR---------APTVMLESSGGLSLQTAATYAE-TGVDYLAVGALTHS 274 (284)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTCEEEEESSCCTTTHHHHHH-TTCSEEECGGGTSS
T ss_pred CCHHHHHHHHHHhhcc---------CCCeEEEEECCCCHHHHHHHHh-cCCCEEEECHHHcC
Confidence 4899999888888753 2358899999999999999876 67999999996443
No 127
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=76.84 E-value=2.5 Score=36.47 Aligned_cols=155 Identities=18% Similarity=0.216 Sum_probs=85.6
Q ss_pred EcCccccHHHHH---hhcCCCceEeeecccccCCcc--ccc-cc-----cHHHHHhCCCCEEEeCchhhccccccChHHH
Q 025540 42 VSPPFVFLGLVK---SSLRPGFHVAAQNCWVKKGGA--FTG-EI-----SAEMLVNLEIPWVILGHSERRLILNELNEFV 110 (251)
Q Consensus 42 i~Pp~~~L~~~~---~~~~~~i~vgAQn~~~~~~Ga--~TG-ei-----S~~mLkd~G~~~viiGHSERR~~f~Etd~~i 110 (251)
+.|++-.+..+. +.. ++.+-. |=....|- |+- |+ ...+++++|++.+.+|=--. =++-|...
T Consensus 36 lTPS~g~i~~~~~~~~~~--~ipV~v--MIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~---dg~iD~~~ 108 (224)
T 2bdq_A 36 TTPSYGVIKEANQYLHEK--GISVAV--MIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTS---NNHIDTEA 108 (224)
T ss_dssp BCCCHHHHHHHHHHHHHT--TCEEEE--ECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT---TSSBCHHH
T ss_pred cCCCHHHHHHHHHhhhhc--CCceEE--EECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECC---CCCcCHHH
Confidence 568888888776 543 232211 11112232 332 22 45688999999999997643 24456666
Q ss_pred HHHHHHHHHCCCeEEE--EeCCc--HHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCC--HHHHHH
Q 025540 111 GDKVAYALSQGLKVIA--CVGET--LEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT--PAQAQE 184 (251)
Q Consensus 111 ~~Kv~~al~~gl~pIl--CiGE~--~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~--~e~i~~ 184 (251)
.+++..+. .|+...+ .+... .+. ..-.+||... + .+++. =+|..++ .++
T Consensus 109 ~~~Li~~a-~~~~vTFHRAFD~~~~~d~-------~~ale~L~~l--G---v~rIL---------TSG~~~~~~a~~--- 163 (224)
T 2bdq_A 109 IEQLLPAT-QGLPLVFHMAFDVIPKSDQ-------KKSIDQLVAL--G---FTRIL---------LHGSSNGEPIIE--- 163 (224)
T ss_dssp HHHHHHHH-TTCCEEECGGGGGSCTTTH-------HHHHHHHHHT--T---CCEEE---------ECSCSSCCCGGG---
T ss_pred HHHHHHHh-CCCeEEEECchhccCCcCH-------HHHHHHHHHc--C---CCEEE---------CCCCCCCCcHHH---
Confidence 66666544 5887776 12211 100 1112222221 1 23332 1344444 332
Q ss_pred HHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEc
Q 025540 185 VHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 185 ~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG 233 (251)
-...||+++... +..+.|+-||+|+++|+.++....+++-+=..
T Consensus 164 g~~~L~~Lv~~a-----~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 164 NIKHIKALVEYA-----NNRIEIMVGGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp GHHHHHHHHHHH-----TTSSEEEECSSCCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHhh-----CCCeEEEeCCCCCHHHHHHHHHhhCCCEEccc
Confidence 233444444321 34689999999999999999877788766543
No 128
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=76.29 E-value=16 Score=30.56 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQE 184 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~ 184 (251)
+-+.+.+-+..|.+.|...|++ .|............+.+.+.++.+++. ...+.|++||.+--++-...+++++.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~---~~gv~l~lEn~~~~~~~~~~~~~~~~~ 163 (285)
T 1qtw_A 87 SRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAA 163 (285)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHH---CSSCEEEEECCCCCTTBCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhc---cCCCEEEEecCCCCCCcccCCHHHHHH
Confidence 3345567778888888876654 343211000001122333444444432 346889999986333333357787776
Q ss_pred HHHHH
Q 025540 185 VHFEL 189 (251)
Q Consensus 185 ~~~~I 189 (251)
+++.+
T Consensus 164 l~~~v 168 (285)
T 1qtw_A 164 IIDGV 168 (285)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 66655
No 129
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=76.23 E-value=11 Score=33.60 Aligned_cols=129 Identities=17% Similarity=0.068 Sum_probs=67.3
Q ss_pred cccHHHHHhCCCCEEEeCchhhccc--cc-cChHHHHHHHHHHHHCCCeEEEEeCCcHHHHh-------cCCcHHHHHHH
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLI--LN-ELNEFVGDKVAYALSQGLKVIACVGETLEQRE-------AGSTMDVVAAQ 147 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~--f~-Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~-------~g~~~~~~~~Q 147 (251)
+-..+.+|++|++.|=+-|+-.+-. -+ +.-+.+.+-+..|.++||.+|+.+-....... -..+.+...+.
T Consensus 88 ~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 4hty_A 88 KKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTKGETFDF 167 (359)
T ss_dssp HHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHHHHHHHH
Confidence 3356789999999998888755310 00 11233456789999999999998754311000 00123444444
Q ss_pred HHHHHhccCCCCCeEEEE----cccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC
Q 025540 148 TKAIADRVSSWSNIVLAY----EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 212 (251)
Q Consensus 148 l~~~l~~i~~~~~~iIAY----EPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS 212 (251)
++.+.+..... +-+|+| ||...-.....++.+...+.++.+-+.+++. +.+-.|++||.
T Consensus 168 ~~~la~ryk~~-p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~-----dp~~~I~v~g~ 230 (359)
T 4hty_A 168 WRRVSERYNGI-NSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAH-----NPKAIALVAGF 230 (359)
T ss_dssp HHHHHHHTTTC-TTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHH-----CTTCEEEEECH
T ss_pred HHHHHHHhCCC-CcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHh-----CCCcEEEEcCc
Confidence 45444433322 345556 4542111101234444444443333333332 34557888875
No 130
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=75.96 E-value=1.6 Score=39.78 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=34.9
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-+|+++++++.+++....+|++.+|++.+. +++.
T Consensus 294 ~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~~~ 333 (364)
T 1vyr_A 294 HGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLV 333 (364)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChhHH
Confidence 48999999999999999999888999999999986 6643
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=75.63 E-value=12 Score=35.24 Aligned_cols=33 Identities=9% Similarity=0.148 Sum_probs=27.1
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccC
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
++||+-.|+| +++++...+. .+.|++.+|++-+
T Consensus 332 ~iPVIa~GGI~~~~di~kal~-~GAd~V~vGs~~~ 365 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMV-AGAYCVMMGSMFA 365 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-HTCSEEEECTTTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-cCCCeeeecHHHh
Confidence 4999999999 6777777665 4899999999754
No 132
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=75.53 E-value=29 Score=32.89 Aligned_cols=33 Identities=9% Similarity=0.146 Sum_probs=24.4
Q ss_pred cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccC
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl 237 (251)
++||+..|+|.. +.+...+ ..+.||+.+|++-+
T Consensus 359 ~iPVIa~GGI~~~~di~kal-a~GA~~V~vGs~~~ 392 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKAL-AAGAHVVMLGSMFA 392 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred CCcEEEeCCCCCHHHHHHHH-HhCchhheecHHHh
Confidence 489999888854 4454444 46999999999743
No 133
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=75.24 E-value=9.7 Score=33.48 Aligned_cols=60 Identities=15% Similarity=0.250 Sum_probs=47.8
Q ss_pred CeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcc-eEEEccCCCcccHHHHhc
Q 025540 160 NIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAAT-RIIYGGSVNGANCKELAA 223 (251)
Q Consensus 160 ~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i-~ilYGGSV~~~n~~~l~~ 223 (251)
+.++.|+|.| .+.+|..+||.+++++.+.||+. ++ -|++--.+++..+..++.
T Consensus 184 ~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 252 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVI-----------KPSALFVESSVDRRPMETVSK 252 (294)
T ss_dssp CCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHS-----------CCSCEEEETTSCSHHHHHHHH
T ss_pred cEEEEECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCEEEEeCCCCcHHHHHHHH
Confidence 6678899977 45589999999999999999863 34 377778888888888888
Q ss_pred CCCCCEE
Q 025540 224 QPDVDGF 230 (251)
Q Consensus 224 ~~~vDG~ 230 (251)
..++.=+
T Consensus 253 ~~g~~v~ 259 (294)
T 3hh8_A 253 DSGIPIY 259 (294)
T ss_dssp HHCCCEE
T ss_pred HhCCcEE
Confidence 7777644
No 134
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=75.11 E-value=4.4 Score=35.49 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|++++++++.++.. .++++|.-=|+|+++|+.+++. .++|++-+|++-
T Consensus 211 ~~~~~l~~~v~~l~~~---------~~~~~i~AsGGI~~~ni~~~~~-aGaD~i~vGs~i 260 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAH---------YPFVLLEASGNISLESINAYAK-SGVDAISVGALI 260 (273)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTCEEEEESSCCTTTHHHHHT-TTCSEEECTHHH
T ss_pred CCHHHHHHHHHHhhcc---------CCCcEEEEECCCCHHHHHHHHH-cCCcEEEEcHHh
Confidence 4689988888776642 2458999999999999999875 789999999863
No 135
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=75.08 E-value=24 Score=31.28 Aligned_cols=135 Identities=14% Similarity=0.120 Sum_probs=69.9
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
+++...+.|++.|.+==--+.....++-+.+.+=++.|-+.|+..|+ |+.....-+...+.+....+. ...+. .
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIi---e~~~G~~~~~d~e~i~~aari-A~elG--A 203 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMA---VTGVGKDMVRDQRYFSLATRI-AAEMG--A 203 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEE---EECC----CCSHHHHHHHHHH-HHHTT--C
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEE---ECCCCCccCCCHHHHHHHHHH-HHHhC--C
Confidence 78888899999887510000112233445566777888889987765 331100011233333322222 22221 2
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcc------cHHHHhcCCCCCEEEEc
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGA------NCKELAAQPDVDGFLVG 233 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~------n~~~l~~~~~vDG~LVG 233 (251)
.++=.+ +. + +. +++... +..+||+-=|+.+.+ ++.+.+. .+.+|+.+|
T Consensus 204 D~VKt~-~t-----~-----e~-------~~~vv~-------~~~vPVv~~GG~~~~~~~~l~~v~~ai~-aGA~Gv~vG 257 (295)
T 3glc_A 204 QIIKTY-YV-----E-----KG-------FERIVA-------GCPVPIVIAGGKKLPEREALEMCWQAID-QGASGVDMG 257 (295)
T ss_dssp SEEEEE-CC-----T-----TT-------HHHHHH-------TCSSCEEEECCSCCCHHHHHHHHHHHHH-TTCSEEEES
T ss_pred CEEEeC-CC-----H-----HH-------HHHHHH-------hCCCcEEEEECCCCCHHHHHHHHHHHHH-hCCeEEEeH
Confidence 333332 11 1 11 233222 123777777777653 4555554 599999999
Q ss_pred CccCc-hHHHHHHH
Q 025540 234 GASLK-PEFIDIIK 246 (251)
Q Consensus 234 ~asl~-~~F~~Ii~ 246 (251)
++.++ ++-..+++
T Consensus 258 RnI~q~~dp~~~~~ 271 (295)
T 3glc_A 258 RNIFQSDHPVAMMK 271 (295)
T ss_dssp HHHHTSSSHHHHHH
T ss_pred HHHhcCcCHHHHHH
Confidence 99996 44444443
No 136
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=74.65 E-value=3.4 Score=34.31 Aligned_cols=74 Identities=18% Similarity=0.242 Sum_probs=47.9
Q ss_pred eEEEEcccCccCC----CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 161 IVLAYEPVWAIGT----GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 161 ~iIAYEPvWAIGt----G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|.+-|++.-+| |.+..++.++++ ++ .. ..++|++==|+++++|+.+++. .+.||+-|+++-
T Consensus 109 Dyv~~g~vf~t~sk~~~~~~~g~~~l~~~----~~---~~-----~~~iPviaiGGI~~~nv~~~~~-~Ga~gVav~s~i 175 (210)
T 3ceu_A 109 DYVFMSPIYDSISKVNYYSTYTAEELREA----QK---AK-----IIDSKVMALGGINEDNLLEIKD-FGFGGAVVLGDL 175 (210)
T ss_dssp SEEEECCCC---------CCCCHHHHHHH----HH---TT-----CSSTTEEEESSCCTTTHHHHHH-TTCSEEEESHHH
T ss_pred CEEEECCcCCCCCCCCCCCCCCHHHHHHH----HH---hc-----CCCCCEEEECCCCHHHHHHHHH-hCCCEEEEhHHh
Confidence 4678888876554 233455554432 21 10 0258999999999999999986 899999999986
Q ss_pred Cc-h------HHHHHHHH
Q 025540 237 LK-P------EFIDIIKS 247 (251)
Q Consensus 237 l~-~------~F~~Ii~~ 247 (251)
++ + .|.+.++.
T Consensus 176 ~~~~d~~~~~~~~~~v~~ 193 (210)
T 3ceu_A 176 WNKFDACLDQNYLAVIEH 193 (210)
T ss_dssp HTTCCTTTSSCCHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHH
Confidence 64 1 36666654
No 137
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=74.53 E-value=14 Score=32.85 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=52.5
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.++..++.+|.|+|.| .+.+|..+||.+++++.+.||+. +++ |
T Consensus 189 Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~I 257 (321)
T 1xvl_A 189 IDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN-----------NVPTI 257 (321)
T ss_dssp HHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTT-----------TCSEE
T ss_pred HHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCcEE
Confidence 33444444544432235567777765 45678999999999999999853 355 5
Q ss_pred EEccCCCcccHHHHhcCCCCCE
Q 025540 208 IYGGSVNGANCKELAAQPDVDG 229 (251)
Q Consensus 208 lYGGSV~~~n~~~l~~~~~vDG 229 (251)
++--.+++..+..++...++.=
T Consensus 258 f~e~~~~~~~~~~iA~e~g~~v 279 (321)
T 1xvl_A 258 FCESTVSDKGQKQVAQATGARF 279 (321)
T ss_dssp EEETTSCSHHHHHHHTTTCCEE
T ss_pred EEeCCCChHHHHHHHHhcCCce
Confidence 6778889999999988887653
No 138
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.84 E-value=1.7 Score=39.98 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=35.0
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-.|.++++.+.+++....+|++.+|++.+. +++.
T Consensus 299 ~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~l~ 338 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPDLP 338 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCchHH
Confidence 47999999999999999999888999999999996 6653
No 139
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=73.44 E-value=1.1 Score=37.80 Aligned_cols=41 Identities=20% Similarity=0.307 Sum_probs=32.7
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDI 244 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~I 244 (251)
.+|++.+|+++.....+.+...++||+.+|.+.+. ++ +.++
T Consensus 73 ~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH
Confidence 48999999999866666566678999999999987 55 5555
No 140
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=73.14 E-value=2.6 Score=38.09 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=36.1
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHH-HHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEF-IDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F-~~Ii~~ 247 (251)
++||+-+|++ +++++.+++....+|++.+|++.+. |+| .++.+.
T Consensus 288 ~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~ 334 (349)
T 3hgj_A 288 GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKA 334 (349)
T ss_dssp CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHH
Confidence 3899999998 5899999999888999999999997 764 444443
No 141
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=72.87 E-value=2 Score=38.87 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=35.8
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHH-HHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEF-IDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F-~~Ii~~ 247 (251)
++||+-+|++ +++.+.+++..-.+|++.+|++.+. |+| .++.+.
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~ 323 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARE 323 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHH
T ss_pred CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHH
Confidence 3899999998 5788989888878999999999996 765 455443
No 142
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=72.84 E-value=14 Score=32.81 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=52.8
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.++..++.++.|+|.| .|.++..+||.+++++.+.||+. +++ |
T Consensus 175 Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~-----------~v~~I 243 (307)
T 3ujp_A 175 IDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN-----------NVPTI 243 (307)
T ss_dssp HHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTT-----------TCSEE
T ss_pred HHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhc-----------CCcEE
Confidence 44444444554432346677888865 56788999999999999999853 344 5
Q ss_pred EEccCCCcccHHHHhcCCCCC
Q 025540 208 IYGGSVNGANCKELAAQPDVD 228 (251)
Q Consensus 208 lYGGSV~~~n~~~l~~~~~vD 228 (251)
++--.+++..+..++...++.
T Consensus 244 f~e~~~~~k~~~~ia~e~g~~ 264 (307)
T 3ujp_A 244 FCESTVSDKGQKQVAQATGAR 264 (307)
T ss_dssp EEETTSCSHHHHHTTTTTCCE
T ss_pred EEeCCCChHHHHHHHHHhCCc
Confidence 666778888888888888865
No 143
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=72.77 E-value=27 Score=32.51 Aligned_cols=51 Identities=16% Similarity=0.046 Sum_probs=38.2
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
..+.|++.|++.|=+-|+..-.+-.+.-+.+.+-+..|.++||.+|+.+--
T Consensus 44 di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~ 94 (464)
T 1wky_A 44 AIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHD 94 (464)
T ss_dssp HHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 567899999999988776321222234456778899999999999998754
No 144
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=72.18 E-value=2 Score=39.13 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=34.7
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-.|+++++++.+++....+|++.+|++.+. +++.
T Consensus 293 ~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~ 332 (365)
T 2gou_A 293 QGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLP 332 (365)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHH
T ss_pred CCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHH
Confidence 47999999999999999999888999999999986 6643
No 145
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=71.58 E-value=2.3 Score=38.65 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=36.0
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHH-HHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEF-IDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F-~~Ii~~ 247 (251)
++||+-+|++ +++.+.+++..-.+|++.+|++.+. |+| .++.+.
T Consensus 295 ~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~ 341 (363)
T 3l5l_A 295 KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKE 341 (363)
T ss_dssp TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHH
Confidence 3899999999 5899999998888999999999987 765 444443
No 146
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=71.58 E-value=27 Score=31.61 Aligned_cols=107 Identities=9% Similarity=-0.014 Sum_probs=62.1
Q ss_pred HHHHHhCCCCEEEe---Cchhhc----------cccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcH---HHH
Q 025540 81 AEMLVNLEIPWVIL---GHSERR----------LILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTM---DVV 144 (251)
Q Consensus 81 ~~mLkd~G~~~vii---GHSERR----------~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~---~~~ 144 (251)
..++|++|++||++ +|-..- ....-..+.|..=+.+|.++||+..+.+.-+...-..++.. +..
T Consensus 60 ~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~W~~~d~~~e~e~~ 139 (340)
T 4h41_A 60 FQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRYWDTGDLSWEIEDN 139 (340)
T ss_dssp HHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHHHHHSCGGGGHHHH
T ss_pred HHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhhcCCCCHHHHHHHH
Confidence 56889999999998 553221 11112345688889999999999888877665444444432 223
Q ss_pred HHHHHHHHhccC----CCCCeEEEEcccCccCCCCC-CCHHHHHHHHHHHHHH
Q 025540 145 AAQTKAIADRVS----SWSNIVLAYEPVWAIGTGKV-ATPAQAQEVHFELRKW 192 (251)
Q Consensus 145 ~~Ql~~~l~~i~----~~~~~iIAYEPvWAIGtG~~-a~~e~i~~~~~~IR~~ 192 (251)
...++.+..... .+.--.|-||+- ..+ ..++..+++...+++.
T Consensus 140 ~~~i~El~~~Yg~~h~af~GWYi~~Ei~-----~~~~~~~~~~~~l~~~lk~l 187 (340)
T 4h41_A 140 KYVIDEVWKMYGEKYKSFGGWYISGEIS-----RATKGAIDAFRAMGKQCKDI 187 (340)
T ss_dssp HHHHHHHHHHTTTTCTTEEEEEECCCCS-----SCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCeeEEEeccccC-----chhhhHHHHHHHHHHHHHHh
Confidence 334444444332 122356888872 112 2355555555555543
No 147
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=70.99 E-value=49 Score=28.24 Aligned_cols=171 Identities=16% Similarity=0.155 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHhhccCCCCCCceeEEEcC--ccccHHHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEE
Q 025540 16 TPEEVKKIVSVLNEGQVPSSDVVEVVVSP--PFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVI 93 (251)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~~~~~~v~i~P--p~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~vi 93 (251)
+.+++..+++.+.+.-. .-+++=+-- +.-.+..+++.+ ..+.+||-.+- | .-.++...+.|++++.
T Consensus 44 ~~~~a~~~a~al~~gGi---~~iEvt~~t~~a~e~I~~l~~~~-~~~~iGaGTVl-------t-~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGL---PAAEITFRSDAAVEAIRLLRQAQ-PEMLIGAGTIL-------N-GEQALAAKEAGATFVV 111 (232)
T ss_dssp SGGGHHHHHHHHHHTTC---CEEEEETTSTTHHHHHHHHHHHC-TTCEEEEECCC-------S-HHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHCCC---CEEEEeCCCCCHHHHHHHHHHhC-CCCEEeECCcC-------C-HHHHHHHHHcCCCEEE
Confidence 45666777776655211 224442221 223444455544 35778886542 3 4468889999999999
Q ss_pred eCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCC
Q 025540 94 LGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGT 173 (251)
Q Consensus 94 iGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGt 173 (251)
.++. |.. =++.|.+.|+..+-=+- |.+| +...++ ..-.+|-.=|.-..|
T Consensus 112 sP~~---------~~~---vi~~~~~~gi~~ipGv~-TptE-------------i~~A~~----~Gad~vK~FPa~~~g- 160 (232)
T 4e38_A 112 SPGF---------NPN---TVRACQEIGIDIVPGVN-NPST-------------VEAALE----MGLTTLKFFPAEASG- 160 (232)
T ss_dssp CSSC---------CHH---HHHHHHHHTCEEECEEC-SHHH-------------HHHHHH----TTCCEEEECSTTTTT-
T ss_pred eCCC---------CHH---HHHHHHHcCCCEEcCCC-CHHH-------------HHHHHH----cCCCEEEECcCcccc-
Confidence 8872 322 23456777877554333 3222 223333 223345555631111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCch------HHHHHHHH
Q 025540 174 GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP------EFIDIIKS 247 (251)
Q Consensus 174 G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~------~F~~Ii~~ 247 (251)
.+ .+||.+.. .+ .++|++==|+|+++|+.+++... .+++.+|+.-.++ +|..|-+.
T Consensus 161 ----G~-------~~lkal~~-p~-----p~ip~~ptGGI~~~n~~~~l~aG-a~~~vgGs~l~~~~~i~~~~~~~i~~~ 222 (232)
T 4e38_A 161 ----GI-------SMVKSLVG-PY-----GDIRLMPTGGITPSNIDNYLAIP-QVLACGGTWMVDKKLVTNGEWDEIARL 222 (232)
T ss_dssp ----HH-------HHHHHHHT-TC-----TTCEEEEBSSCCTTTHHHHHTST-TBCCEEECGGGCHHHHHTTCHHHHHHH
T ss_pred ----CH-------HHHHHHHH-Hh-----cCCCeeeEcCCCHHHHHHHHHCC-CeEEEECchhcChHHhhcCCHHHHHHH
Confidence 12 45555432 22 35899999999999999999754 5565555543322 45555443
No 148
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=70.85 E-value=30 Score=29.82 Aligned_cols=48 Identities=17% Similarity=0.094 Sum_probs=34.0
Q ss_pred HHHHHhCCCCEEEe-Cchhhcc-----------------ccc--c-ChHHHHHHHHHHHHCCCeEEEEe
Q 025540 81 AEMLVNLEIPWVIL-GHSERRL-----------------ILN--E-LNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 81 ~~mLkd~G~~~vii-GHSERR~-----------------~f~--E-td~~i~~Kv~~al~~gl~pIlCi 128 (251)
.+.||++|++.|=+ .|++... .++ | .-+.+.+-+..|.++||.+|+++
T Consensus 42 l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 42 FSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp HHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 46789999999977 5664210 121 2 23455678889999999999998
No 149
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=70.67 E-value=5.9 Score=35.23 Aligned_cols=50 Identities=14% Similarity=0.209 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|+++.++++.++.. .++++|.-=|+|+++|+.+++. .++|++-+|++-
T Consensus 226 ~~~~~l~~~v~~l~~~---------~~~~~I~ASGGIt~~ni~~~~~-aGaD~i~vGs~i 275 (299)
T 2jbm_A 226 FKPEELHPTATVLKAQ---------FPSVAVEASGGITLDNLPQFCG-PHIDVISMGMLT 275 (299)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTSEEEEESSCCTTTHHHHCC-TTCCEEECTHHH
T ss_pred CCHHHHHHHHHHhhcc---------CCCeeEEEECCCCHHHHHHHHH-CCCCEEEEChhh
Confidence 4689988888777642 2458999999999999998764 789999999843
No 150
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=70.56 E-value=9.6 Score=33.24 Aligned_cols=79 Identities=10% Similarity=0.021 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceE
Q 025540 143 VVAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRI 207 (251)
Q Consensus 143 ~~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~i 207 (251)
.+.++++..++.++..++.++.|+|.| .+.++..+||.+++++.+.||+. ++++
T Consensus 147 ~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 215 (282)
T 3mfq_A 147 DLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDH-----------NIKA 215 (282)
T ss_dssp HHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHH-----------TCCE
T ss_pred HHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 344455555554432346677787766 34478889999999999999974 3654
Q ss_pred -EEccCCCcccHHHH---hcCCCCCEEEE
Q 025540 208 -IYGGSVNGANCKEL---AAQPDVDGFLV 232 (251)
Q Consensus 208 -lYGGSV~~~n~~~l---~~~~~vDG~LV 232 (251)
++-=.+++.-+..+ +...++.-+.+
T Consensus 216 if~e~~~~~~~~~~l~~~a~~~g~~v~~l 244 (282)
T 3mfq_A 216 IFTESTTNPERMKKLQEAVKAKGGQVEVV 244 (282)
T ss_dssp EECBTTSCTHHHHHHHHHHHTTSCCCEEE
T ss_pred EEEeCCCChHHHHHHHHHHHhcCCceEEe
Confidence 45555666555554 44667654443
No 151
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=70.01 E-value=21 Score=30.41 Aligned_cols=118 Identities=16% Similarity=0.088 Sum_probs=62.7
Q ss_pred cccHHHHH-hCCCCEEEeCchhh--cccc-c-c-ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHH
Q 025540 78 EISAEMLV-NLEIPWVILGHSER--RLIL-N-E-LNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI 151 (251)
Q Consensus 78 eiS~~mLk-d~G~~~viiGHSER--R~~f-~-E-td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~ 151 (251)
+-..+.|+ ++|++.|=+.|+-. -.++ + | .-+.+.+-+..|.++||.+|+.+--... +...+...+-++.+
T Consensus 41 ~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~----~~~~~~~~~~~~~i 116 (291)
T 1egz_A 41 ADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA----ENNRSEAIRFFQEM 116 (291)
T ss_dssp HHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG----GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc----chhHHHHHHHHHHH
Confidence 33456678 99999998877521 1111 1 0 1234556789999999999998843211 11222222222222
Q ss_pred HhccCCCCCeEEEEc----ccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC
Q 025540 152 ADRVSSWSNIVLAYE----PVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 212 (251)
Q Consensus 152 l~~i~~~~~~iIAYE----PvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS 212 (251)
......... |+ || |.- ++-...-.+..+++.+.||+. +.+-+|++||.
T Consensus 117 a~r~~~~p~-V~-~el~NEP~~--~~~~~~~~~~~~~~~~~IR~~---------d~~~~i~v~~~ 168 (291)
T 1egz_A 117 ARKYGNKPN-VI-YEIYNEPLQ--VSWSNTIKPYAEAVISAIRAI---------DPDNLIIVGTP 168 (291)
T ss_dssp HHHHTTSTT-EE-EECCSCCCS--CCTTTTHHHHHHHHHHHHHHH---------CSSSCEEECCH
T ss_pred HHHhCCCCc-EE-EEecCCCCC--CchHHHHHHHHHHHHHHHHhc---------CCCCEEEECCC
Confidence 222222223 34 74 531 000011244667888888875 34567888874
No 152
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=68.99 E-value=2.9 Score=38.71 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=34.8
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+..|.++++.+.+++....+|++.+|++.+. |+|.
T Consensus 319 ~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~ 358 (402)
T 2hsa_B 319 QGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLV 358 (402)
T ss_dssp SSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHH
Confidence 47999999999999999999888999999999996 7654
No 153
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=68.51 E-value=35 Score=29.11 Aligned_cols=127 Identities=18% Similarity=0.175 Sum_probs=67.5
Q ss_pred HHHHHhCCCCEEEeC--chhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCC
Q 025540 81 AEMLVNLEIPWVILG--HSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiG--HSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~ 158 (251)
.+.+...|++++++. |+ -...+....-+..+...|..+++=|-+.... . |+.++.. . .
T Consensus 33 ~e~a~~~gaD~v~lDlEd~------p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~--------~----i~~~l~~-g-~ 92 (256)
T 1dxe_A 33 TEVLGLAGFDWLVLDGEHA------PNDISTFIPQLMALKGSASAPVVRVPTNEPV--------I----IKRLLDI-G-F 92 (256)
T ss_dssp HHHHTTSCCSEEEEESSSS------SCCHHHHHHHHHHTTTCSSEEEEECSSSCHH--------H----HHHHHHT-T-C
T ss_pred HHHHHhCCCCEEEEcCCCC------CCCHHHHHHHHHHHHhCCCcEEEECCCCCHH--------H----HHHHHhc-C-C
Confidence 455677888899986 44 2233344444444444567788877754211 1 4455542 1 1
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHH---HH--------hcCC------ccccCcceEE--EccCCCcccHH
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKW---LL--------ANTS------PEIAAATRII--YGGSVNGANCK 219 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~---l~--------~~~~------~~~~~~i~il--YGGSV~~~n~~ 219 (251)
.-+++ .++-|+++++++.+.++.- ++ ..|| ...+.+++|+ --=--.-.|+.
T Consensus 93 ~gI~~----------P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~ 162 (256)
T 1dxe_A 93 YNFLI----------PFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVD 162 (256)
T ss_dssp CEEEE----------SCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHH
T ss_pred ceeee----------cCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHH
Confidence 22333 3677899998777776520 00 0000 0001111111 00001125899
Q ss_pred HHhcCCCCCEEEEcCccC
Q 025540 220 ELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 220 ~l~~~~~vDG~LVG~asl 237 (251)
+++..+++||+++|..-|
T Consensus 163 eIa~~~~vd~l~iG~~DL 180 (256)
T 1dxe_A 163 AIAATEGVDGIFVGPSDL 180 (256)
T ss_dssp HHHTSTTCCEEEECHHHH
T ss_pred HHhCCCCCCEEEEChHHH
Confidence 999989999999998644
No 154
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=67.20 E-value=3.8 Score=37.12 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=33.1
Q ss_pred ceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 205 TRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 205 i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
+||+-.|+++ ++.+.+++....+|++.+|++.+. |+|.
T Consensus 278 iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~ 317 (343)
T 3kru_A 278 IKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWV 317 (343)
T ss_dssp CEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred cccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEE
Confidence 8999999985 788999998888999999999986 7653
No 155
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=66.97 E-value=5.9 Score=33.08 Aligned_cols=45 Identities=18% Similarity=0.234 Sum_probs=33.4
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~ 248 (251)
++|++.+|.|+.....+.+...++|++.+|.+.+. + .+.++++.+
T Consensus 74 ~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~ 120 (244)
T 2y88_A 74 DVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEH 120 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc
Confidence 48999999998644444455578999999999987 4 466666653
No 156
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=66.87 E-value=5.9 Score=33.18 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.5
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h-HHHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~-~F~~Ii~~~ 248 (251)
++|++.+|.|+.....+.+...++|++.+|..++. + .+.++++..
T Consensus 75 ~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEH 121 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH
T ss_pred CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHc
Confidence 48999999998644445555578999999999987 4 466666653
No 157
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=66.72 E-value=27 Score=29.77 Aligned_cols=53 Identities=13% Similarity=0.020 Sum_probs=35.1
Q ss_pred cccHHHHH-hCCCCEEEeCchhh---ccccc---c-ChHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 78 EISAEMLV-NLEIPWVILGHSER---RLILN---E-LNEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 78 eiS~~mLk-d~G~~~viiGHSER---R~~f~---E-td~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
+-..+.|+ +.|++.|=+.|+-. -.++. | .-+.+.+-+..|.++||.+|+.+-.
T Consensus 41 ~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~ 101 (293)
T 1tvn_A 41 AETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHS 101 (293)
T ss_dssp HHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 33456678 69999998877531 11221 1 1234556789999999999998753
No 158
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=66.69 E-value=5.1 Score=35.70 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~a 235 (251)
.+|++++++++.++ .++++.--|+|+++|+.+++. .+||++-+|..
T Consensus 227 ~~~~~l~~av~~~~------------~~v~ieaSGGIt~~~i~~~a~-tGVD~IsvGal 272 (287)
T 3tqv_A 227 FSGEDIDIAVSIAR------------GKVALEVSGNIDRNSIVAIAK-TGVDFISVGAI 272 (287)
T ss_dssp CCHHHHHHHHHHHT------------TTCEEEEESSCCTTTHHHHHT-TTCSEEECSHH
T ss_pred CCHHHHHHHHHhhc------------CCceEEEECCCCHHHHHHHHH-cCCCEEEEChh
Confidence 67888888887765 248899999999999999876 89999999864
No 159
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=66.68 E-value=4 Score=37.32 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=34.0
Q ss_pred ceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 205 TRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 205 i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
+||+-.|+++++.+.+++....+|++.+|++.+. |+|.
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPdl~ 326 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPDLP 326 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHH
Confidence 6888888899999999999888999999999996 7654
No 160
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=66.56 E-value=49 Score=28.69 Aligned_cols=91 Identities=11% Similarity=0.203 Sum_probs=58.1
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.+ ..+-+|.|+|.| .+.++..+||.+++++.+.||+. +++ |
T Consensus 166 Ld~~~~~~l~~~--~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~i 232 (286)
T 3gi1_A 166 LTEEYTQKFKKV--RSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEY-----------NVKTI 232 (286)
T ss_dssp HHHHHHHHHTTC--SCCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHT-----------TCCEE
T ss_pred HHHHHHHHHhcC--CCCEEEEECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 444455555544 245678899854 45678899999999999999863 344 6
Q ss_pred EEccCCCcccHHHHhcCCCCCEEEEcC-ccC--c-hHHHHHHHH
Q 025540 208 IYGGSVNGANCKELAAQPDVDGFLVGG-ASL--K-PEFIDIIKS 247 (251)
Q Consensus 208 lYGGSV~~~n~~~l~~~~~vDG~LVG~-asl--~-~~F~~Ii~~ 247 (251)
+|-=.+++..+..++...++.=+.+.- .++ . ++|.++++.
T Consensus 233 f~e~~~~~~~~~~la~~~g~~v~~l~pl~~~~~~~~~Y~~~m~~ 276 (286)
T 3gi1_A 233 FAEDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKTYLENLRA 276 (286)
T ss_dssp EECTTSCTHHHHHHHHTTTCEEEECCCSCSCCSSSCCHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHhCCeEEEecccccCCCCcCCHHHHHHH
Confidence 667778888888888888876544421 111 1 356666553
No 161
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=66.50 E-value=28 Score=30.81 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=52.3
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.++..++.+|.|+|.| .+.+|..+||.+++++.+.||+. +++ |
T Consensus 182 Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~I 250 (313)
T 1toa_A 182 LDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQR-----------KLPAI 250 (313)
T ss_dssp HHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHT-----------TCSEE
T ss_pred HHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 44444555554432245677888744 45678999999999999999863 355 5
Q ss_pred EEccCCCcccHHHHh-----cCCCCC
Q 025540 208 IYGGSVNGANCKELA-----AQPDVD 228 (251)
Q Consensus 208 lYGGSV~~~n~~~l~-----~~~~vD 228 (251)
++--.+++..+..++ ...++.
T Consensus 251 f~e~~~~~~~~~~la~~~~A~e~gv~ 276 (313)
T 1toa_A 251 FIESSIPHKNVEALRDAVQARGHVVQ 276 (313)
T ss_dssp EEETTSCTHHHHHHHHHHHTTTCCCE
T ss_pred EEeCCCChHHHHHHHccchhhhcCCc
Confidence 677788888888888 777764
No 162
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=66.19 E-value=5.6 Score=35.68 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|++++++++.++ ..+.+---|+|+++|+.+++. .+||.+-+|..-
T Consensus 236 ~s~~~l~~av~~~~------------~~v~leaSGGIt~~~i~~~A~-tGVD~IsvGalt 282 (300)
T 3l0g_A 236 MSISEIKKAVDIVN------------GKSVLEVSGCVNIRNVRNIAL-TGVDYISIGCIT 282 (300)
T ss_dssp CCHHHHHHHHHHHT------------TSSEEEEESSCCTTTHHHHHT-TTCSEEECGGGT
T ss_pred CCHHHHHHHHHhhc------------CceEEEEECCCCHHHHHHHHH-cCCCEEEeCccc
Confidence 68999998888765 247899999999999999876 899999999754
No 163
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=65.89 E-value=4.8 Score=37.28 Aligned_cols=50 Identities=28% Similarity=0.342 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCc
Q 025540 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 180 e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~a 235 (251)
.+..+..+.+|+.+.+.- .+.++|...|+++++|+.++... ||.+-||..
T Consensus 248 gd~~~~v~~~r~~ld~~G----~~~~~I~aSggl~~~~i~~l~~~--vD~~gvGt~ 297 (395)
T 2i14_A 248 GNFRKIIEEVRWELKVRG----YDWVKIFVSGGLDEEKIKEIVDV--VDAFGVGGA 297 (395)
T ss_dssp SCHHHHHHHHHHHHHHTT----CCSCEEEEESSCCHHHHHTTGGG--CSEEEECHH
T ss_pred ccHHHHHHHHHHHHHhCC----CCceEEEEECCCCHHHHHHHHHh--CCEEEeCcc
Confidence 777888888888876642 13589999999999999999998 999999973
No 164
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=65.30 E-value=3.3 Score=36.26 Aligned_cols=44 Identities=30% Similarity=0.349 Sum_probs=33.9
Q ss_pred CcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc--hH-HHHHHHH
Q 025540 203 AATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK--PE-FIDIIKS 247 (251)
Q Consensus 203 ~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~--~~-F~~Ii~~ 247 (251)
.++||+..|+| +++.+.+++. .+.|++.||++.+. +. |.+|.+.
T Consensus 241 ~~ipvi~~GGI~~~~da~~~l~-~GAd~V~vg~~~l~~~p~~~~~i~~~ 288 (311)
T 1jub_A 241 PEIQIIGTGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRIIKE 288 (311)
T ss_dssp TTSEEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHHHCTHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHH-cCCCEEEEchHHHhcCcHHHHHHHHH
Confidence 36999999999 5678888774 68999999999883 54 5555544
No 165
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=65.17 E-value=15 Score=30.67 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccC--CCCCCCHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIG--TGKVATPAQA 182 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIG--tG~~a~~e~i 182 (251)
.-+.+.+-+..|.+.|...|++ .| ........+..+.+.+.|+.+.+.. ....+.|+|||..--. .....+++++
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~n~~~~~~~~~~~~~~~ 168 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKL-APHGITVLVEPLNTRNMPGYFIVHQLEA 168 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHH-GGGTCEEEECCCCTTTSTTBSCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHH-HHcCCEEEEeeCCcccCccchhcCHHHH
Confidence 4456778888899999987766 55 2111000011223333333333211 1346889999954221 1233467776
Q ss_pred HHHHHHH
Q 025540 183 QEVHFEL 189 (251)
Q Consensus 183 ~~~~~~I 189 (251)
.++++.+
T Consensus 169 ~~l~~~v 175 (269)
T 3ngf_A 169 VGLVKRV 175 (269)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6555544
No 166
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=65.15 E-value=49 Score=28.50 Aligned_cols=49 Identities=10% Similarity=-0.046 Sum_probs=33.1
Q ss_pred cHHHHHhCCCCEEEeC-chhhcc--------cccc----ChHHHHHHHHHHHHCCCeEEEEe
Q 025540 80 SAEMLVNLEIPWVILG-HSERRL--------ILNE----LNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 80 S~~mLkd~G~~~viiG-HSERR~--------~f~E----td~~i~~Kv~~al~~gl~pIlCi 128 (251)
-.+.+|++|++.|=+. |.+-+. +..+ .=+.+.+-+..|.++||.+|+++
T Consensus 50 d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 50 TLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 3456799999999775 765221 0111 11244577889999999999986
No 167
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=64.11 E-value=4.3 Score=37.12 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=33.9
Q ss_pred ceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 205 TRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 205 i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
+||+-.|+++++.+.+++....+|++.+|++.+. |+|.
T Consensus 280 iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPdl~ 318 (362)
T 4ab4_A 280 GPYIVNERFDKASANAALASGKADAVAFGVPFIANPDLP 318 (362)
T ss_dssp SCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHH
Confidence 6898888899999999999888999999999996 7653
No 168
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=64.08 E-value=5.4 Score=37.13 Aligned_cols=49 Identities=16% Similarity=0.268 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHHHH
Q 025540 185 VHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEFID 243 (251)
Q Consensus 185 ~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F~~ 243 (251)
..+.||+.+ ..++||+-.|++ +++.+.+++.. +|++.+|++.+. |+|..
T Consensus 307 ~a~~Ik~~v--------~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ 357 (419)
T 3l5a_A 307 VNQIVYEHL--------AGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVH 357 (419)
T ss_dssp HHHHHHHHH--------TTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHH
T ss_pred HHHHHHHHc--------CCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHH
Confidence 455666654 235899999997 67888888887 999999999986 77643
No 169
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=62.92 E-value=79 Score=27.67 Aligned_cols=128 Identities=20% Similarity=0.146 Sum_probs=69.1
Q ss_pred ccccccccHHHH-HhCCCCEEEeCchhhc-ccc-cc-ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHH
Q 025540 73 GAFTGEISAEML-VNLEIPWVILGHSERR-LIL-NE-LNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT 148 (251)
Q Consensus 73 Ga~TGeiS~~mL-kd~G~~~viiGHSERR-~~f-~E-td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql 148 (251)
|.|.-+-....| ++.|++.|=+-|.... .++ ++ .-+.+.+-+..|.++||.+|+.+-.... .+.....+...+..
T Consensus 66 ~~~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~-~~~~~~~~~~~~~w 144 (327)
T 3pzt_A 66 GEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILND-GNPNQNKEKAKEFF 144 (327)
T ss_dssp GGGCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSS-CSTTTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCC-CCchHHHHHHHHHH
Confidence 444444455666 7999999988776421 111 11 1355667889999999999998864321 01111222233333
Q ss_pred HHHHhccCCCCCeEEEEc----ccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC
Q 025540 149 KAIADRVSSWSNIVLAYE----PVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV 213 (251)
Q Consensus 149 ~~~l~~i~~~~~~iIAYE----PvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV 213 (251)
+.+......... || || |..-. +-...-.+.++++.+.||+. +.+-+|++||.-
T Consensus 145 ~~~a~r~k~~p~-Vi-~el~NEp~~~~-~w~~~~~~~~~~~~~~IR~~---------dp~~~I~v~~~~ 201 (327)
T 3pzt_A 145 KEMSSLYGNTPN-VI-YEIANEPNGDV-NWKRDIKPYAEEVISVIRKN---------DPDNIIIVGTGT 201 (327)
T ss_dssp HHHHHHHTTCTT-EE-EECCSCCCSSC-CTTTTHHHHHHHHHHHHHHH---------CSSSCEEECCHH
T ss_pred HHHHHHhCCCCc-EE-EEeccCCCCCc-ccHHHHHHHHHHHHHHHHhh---------CCCCEEEEeCCc
Confidence 333332222333 44 64 43100 00011135577888888875 456778888853
No 170
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=62.69 E-value=76 Score=27.46 Aligned_cols=130 Identities=12% Similarity=0.009 Sum_probs=72.2
Q ss_pred HHHHHhCCCCEEEeCc----hhhcccc--ccChHHHHHHHHHHHHCCCeEEEEe-----CCcHHHHhcCCcHHHHHHHHH
Q 025540 81 AEMLVNLEIPWVILGH----SERRLIL--NELNEFVGDKVAYALSQGLKVIACV-----GETLEQREAGSTMDVVAAQTK 149 (251)
Q Consensus 81 ~~mLkd~G~~~viiGH----SERR~~f--~Etd~~i~~Kv~~al~~gl~pIlCi-----GE~~~~r~~g~~~~~~~~Ql~ 149 (251)
.+.|++.|++.+.+|+ .|.|..+ +.+-+.+-+-++.+.+.|+.+-..+ ||+.++. .+-+.
T Consensus 145 l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~---------~~~~~ 215 (348)
T 3iix_A 145 YEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDL---------VDDLL 215 (348)
T ss_dssp HHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHH---------HHHHH
T ss_pred HHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHH---------HHHHH
Confidence 4567788999998874 3433332 2477788888999999999643322 5666544 22222
Q ss_pred HHHhccCCCCC-eEEEEcccCccCCC----CCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEc-cCCCcccHHHHhc
Q 025540 150 AIADRVSSWSN-IVLAYEPVWAIGTG----KVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYG-GSVNGANCKELAA 223 (251)
Q Consensus 150 ~~l~~i~~~~~-~iIAYEPvWAIGtG----~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYG-GSV~~~n~~~l~~ 223 (251)
- +..+. ... -+..|-|.- ||. .+.++++..++++..|..+.. ..+++--+ +...++ ..+.+.
T Consensus 216 ~-l~~l~-~~~i~i~~~~p~~--gt~l~~~~~~~~~e~~~~~a~~R~~lp~-------~~i~~~~~~~~~~~~-~~~~~l 283 (348)
T 3iix_A 216 F-LKEHD-FDMVGIGPFIPHP--DTPLANEKKGDFTLTLKMVALTRILLPD-------SNIPATTAMGTIVPG-GREITL 283 (348)
T ss_dssp H-HHHHT-CSEECCEECCCCT--TSTTTTSCCCCHHHHHHHHHHHHHHSTT-------SBCBCCHHHHHHSTT-HHHHHH
T ss_pred H-HHhcC-CCEEeeeeeecCC--CCCcccCCCCCHHHHHHHHHHHHHHCCC-------CCchhcchhhhcCHH-HHHHHH
Confidence 1 22221 111 123444532 442 235788888999988876532 12332101 123343 335555
Q ss_pred CCCCCEEE
Q 025540 224 QPDVDGFL 231 (251)
Q Consensus 224 ~~~vDG~L 231 (251)
..++|.++
T Consensus 284 ~~Gan~i~ 291 (348)
T 3iix_A 284 RCGANVIM 291 (348)
T ss_dssp TTTCCEEC
T ss_pred hcCCcEEe
Confidence 66888877
No 171
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=62.61 E-value=29 Score=32.75 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=25.2
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccC
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl 237 (251)
++||+-.|+|. ++.+...+. .+.||+.+|++-+
T Consensus 334 ~iPVIa~GGI~~~~di~kala-~GAd~V~iGs~f~ 367 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIA-AGASCVMVGSMFA 367 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTTT
T ss_pred CCeEEEeCCCCCHHHHHHHHH-cCCCeEEecHHHh
Confidence 48999999986 555555544 5899999999754
No 172
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=62.46 E-value=46 Score=28.87 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=37.8
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhc-------cccc-cChHHHHHHHHHHHHCCCeEEEEe
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERR-------LILN-ELNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR-------~~f~-Etd~~i~~Kv~~al~~gl~pIlCi 128 (251)
.++-+-..+.|+++|++.|=+.=+-.+ -.++ +.-+.+.+-+..|.++||.+||.+
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildl 97 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISL 97 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 456666778899999999966422111 0112 234556788899999999999976
No 173
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=61.87 E-value=4 Score=37.46 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=34.9
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-+|+++++.+.+++....+|++.+|++.+. |+|.
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~ 346 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLV 346 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHH
Confidence 47999999999999999999888999999999996 7654
No 174
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=61.70 E-value=78 Score=27.22 Aligned_cols=91 Identities=8% Similarity=0.188 Sum_probs=61.0
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.+. .+-+|.|+|.| .+.+|..+||.+++++.+.||+. +++ |
T Consensus 164 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~i 230 (284)
T 3cx3_A 164 LTKKFQPKFEKAT--QKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTY-----------KVKTI 230 (284)
T ss_dssp HHHHHHHHHHSCS--CCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHT-----------TCCCE
T ss_pred HHHHHHHHHhcCC--CCEEEEECCchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 4444555555442 34567787765 45678999999999999999863 344 6
Q ss_pred EEccCCCcccHHHHhcCCCCCEEEE---cCccCc-hHHHHHHHH
Q 025540 208 IYGGSVNGANCKELAAQPDVDGFLV---GGASLK-PEFIDIIKS 247 (251)
Q Consensus 208 lYGGSV~~~n~~~l~~~~~vDG~LV---G~asl~-~~F~~Ii~~ 247 (251)
++-=.+++..+..++...++.-+.+ ++..-. .+|.++++.
T Consensus 231 f~e~~~~~~~~~~ia~~~g~~v~~l~~l~~~~~~~~~Y~~~m~~ 274 (284)
T 3cx3_A 231 FTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEE 274 (284)
T ss_dssp EECSSSCCHHHHHHHSSSSCCEEECCCSSSCCCSSCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHHHHcCCeEEEecCcccCCCCcccHHHHHHH
Confidence 7778888999999998888775544 222111 356666553
No 175
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=61.05 E-value=17 Score=31.09 Aligned_cols=82 Identities=13% Similarity=0.076 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHCCCeEEEEe-----CCcHHHH-hcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHH
Q 025540 107 NEFVGDKVAYALSQGLKVIACV-----GETLEQR-EAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlCi-----GE~~~~r-~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e 180 (251)
-+.+.+-+..|.+.|...|+|. |...... ......+.+.+.|+.+.+.. ....+.|++||.+--.+....+++
T Consensus 106 ~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~gv~l~lEn~~~~~~~~~~~~~ 184 (309)
T 2hk0_A 106 KAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFA-NDLGINLCIEVLNRFENHVLNTAA 184 (309)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHH-HHTTCEEEEECCCTTTCSSCCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHH-HHcCCEEEEeecccccccccCCHH
Confidence 3456677888888888887764 3210000 00011222333333332211 123588999998533333445777
Q ss_pred HHHHHHHHH
Q 025540 181 QAQEVHFEL 189 (251)
Q Consensus 181 ~i~~~~~~I 189 (251)
++.++++.+
T Consensus 185 ~~~~l~~~v 193 (309)
T 2hk0_A 185 EGVAFVKDV 193 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 766655544
No 176
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=61.01 E-value=8.1 Score=35.80 Aligned_cols=51 Identities=20% Similarity=0.278 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCc
Q 025540 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 180 e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~a 235 (251)
.+..+..+.+|+.+.+.- .+.++|...|+++++|+.++... ++|.+-||..
T Consensus 250 gd~~~~v~~v~~~ld~~G----~~~~~I~aSggl~~~~i~~l~~~-GvD~~gvGt~ 300 (398)
T 2i1o_A 250 GNFEALIREVRWELALRG----RSDIKIMVSGGLDENTVKKLREA-GAEAFGVGTS 300 (398)
T ss_dssp SCHHHHHHHHHHHHHHTT----CTTSEEEEESSCCHHHHHHHHHT-TCCEEEECHH
T ss_pred ccHHHHHHHHHHHHHhCC----CCceEEEEeCCCCHHHHHHHHHc-CCCEEEeCcc
Confidence 777888888888876642 13589999999999999999976 6899999973
No 177
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.97 E-value=61 Score=29.34 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=27.5
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccC
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl 237 (251)
++||+--|+|. ++++.+.+. .+.|++.+|++-+
T Consensus 256 ~ipVia~GGI~~~~d~~~ala-~GAd~V~iG~~~l 289 (404)
T 1eep_A 256 NICIIADGGIRFSGDVVKAIA-AGADSVMIGNLFA 289 (404)
T ss_dssp SCEEEEESCCCSHHHHHHHHH-HTCSEEEECHHHH
T ss_pred CceEEEECCCCCHHHHHHHHH-cCCCHHhhCHHHh
Confidence 59999988886 677777776 6899999999864
No 178
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=60.95 E-value=44 Score=28.82 Aligned_cols=73 Identities=8% Similarity=0.088 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-
Q 025540 143 VVAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR- 206 (251)
Q Consensus 143 ~~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~- 206 (251)
.+..+++..++.++ .+-+|.|+|.| .+.+|..+||.+++++.+.||+. +++
T Consensus 160 ~Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 226 (284)
T 2prs_A 160 STETQVGNELAPLK--GKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQ-----------KATC 226 (284)
T ss_dssp HHHHHHHHHHGGGT--TCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHT-----------TCCE
T ss_pred HHHHHHHHHHhcCC--CCeEEEECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 34455555565543 35577888854 45678999999999999999863 455
Q ss_pred EEEccCCCcccHHHHhcCCCCC
Q 025540 207 IIYGGSVNGANCKELAAQPDVD 228 (251)
Q Consensus 207 ilYGGSV~~~n~~~l~~~~~vD 228 (251)
|+|--.+++..+..++...++-
T Consensus 227 if~e~~~~~~~~~~ia~~~g~~ 248 (284)
T 2prs_A 227 VFAEPQFRPAVVESVARGTSVR 248 (284)
T ss_dssp EEECTTSCSHHHHHHTTTSCCE
T ss_pred EEEeCCCChHHHHHHHHHcCCe
Confidence 5566678888898888877765
No 179
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=60.85 E-value=85 Score=27.73 Aligned_cols=48 Identities=15% Similarity=-0.075 Sum_probs=35.1
Q ss_pred cHHHHHhCCCCEEEeC-chhhccccccChHHHHHHHHHHHHCCCeEEEEe
Q 025540 80 SAEMLVNLEIPWVILG-HSERRLILNELNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 80 S~~mLkd~G~~~viiG-HSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCi 128 (251)
....||+.|+++|=+. |-|... -..+.+.+-+.+++|.++||++++-+
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~~-g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPAD-GNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCTT-CTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCCEEEEeeeeCCCC-CcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5688899999999875 322221 12245667788999999999999975
No 180
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=60.69 E-value=5.4 Score=34.59 Aligned_cols=187 Identities=11% Similarity=0.041 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHhhccCCCCCCceeEEEcCccccHHHHHhhcC-CC--ceEeeecccccCCcccccc---ccHHHHHhCCC
Q 025540 16 TPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFVFLGLVKSSLR-PG--FHVAAQNCWVKKGGAFTGE---ISAEMLVNLEI 89 (251)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~-~~--i~vgAQn~~~~~~Ga~TGe---iS~~mLkd~G~ 89 (251)
+.++..+++++..+. ++.-++.+ ..++.... .. .+ +.+.+=- + .. |+.|-+ -+++...+.|+
T Consensus 39 ~~~di~~~~~~a~~~------~~~av~v~-~~~v~~~~--~~~~~liv~~~~~~-~-~~-g~~~~~~~~~~ve~Ai~~Ga 106 (263)
T 1w8s_A 39 DSADPEYILRLARDA------GFDGVVFQ-RGIAEKYY--DGSVPLILKLNGKT-T-LY-NGEPVSVANCSVEEAVSLGA 106 (263)
T ss_dssp GGGCHHHHHHHHHHH------TCSEEEEC-HHHHHHHC--CSSSCEEEECEECC-T-TC-CSSCCCEESSCHHHHHHTTC
T ss_pred chhhHHHHHHHHHhh------CCCEEEEC-HHHHHHhh--cCCCcEEEEEeCCC-C-cC-CCCccchHHHHHHHHHHCCC
Confidence 567777777766552 23333333 33444433 32 33 2221111 1 11 333322 35777888999
Q ss_pred CEEEe----CchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcC--CcHHHHHHHHHHHHhccCCCCCeE-
Q 025540 90 PWVIL----GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAG--STMDVVAAQTKAIADRVSSWSNIV- 162 (251)
Q Consensus 90 ~~vii----GHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g--~~~~~~~~Ql~~~l~~i~~~~~~i- 162 (251)
+.|-+ |.-+ ..+.-+.+.+-...|.+.|+..|+=.-- ...+-+ .+.+.+..-.+...+ . ...++
T Consensus 107 ~~v~~~~nig~~~----~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~a~~-~--GAD~vk 177 (263)
T 1w8s_A 107 SAVGYTIYPGSGF----EWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARIALE-L--GADAMK 177 (263)
T ss_dssp SEEEEEECTTSTT----HHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHHHHH-H--TCSEEE
T ss_pred CEEEEEEecCCcC----HHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHHHHH-c--CCCEEE
Confidence 98854 4211 1223344555556666788886652111 000000 133333221122221 1 11222
Q ss_pred EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcc-------cHHHHhcCCCCCEEEEcCc
Q 025540 163 LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGA-------NCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 163 IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~-------n~~~l~~~~~vDG~LVG~a 235 (251)
.-| | .+++.++++.+.. ..+||+-=|+++.+ |+.+.+. .+.||+.+|++
T Consensus 178 t~~-~---------~~~e~~~~~~~~~-------------~~~pV~asGGi~~~~~~~~l~~i~~~~~-aGA~Gvsvgra 233 (263)
T 1w8s_A 178 IKY-T---------GDPKTFSWAVKVA-------------GKVPVLMSGGPKTKTEEDFLKQVEGVLE-AGALGIAVGRN 233 (263)
T ss_dssp EEC-C---------SSHHHHHHHHHHT-------------TTSCEEEECCSCCSSHHHHHHHHHHHHH-TTCCEEEESHH
T ss_pred EcC-C---------CCHHHHHHHHHhC-------------CCCeEEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEEehh
Confidence 222 2 2566655443221 12488888888866 5555444 79999999999
Q ss_pred cCc-hHHHHHHHH
Q 025540 236 SLK-PEFIDIIKS 247 (251)
Q Consensus 236 sl~-~~F~~Ii~~ 247 (251)
-++ ++-...++.
T Consensus 234 I~~~~dp~~~~~~ 246 (263)
T 1w8s_A 234 VWQRRDALKFARA 246 (263)
T ss_dssp HHTSTTHHHHHHH
T ss_pred hcCCcCHHHHHHH
Confidence 988 554444444
No 181
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=60.32 E-value=5.2 Score=35.10 Aligned_cols=154 Identities=14% Similarity=0.150 Sum_probs=86.9
Q ss_pred EcCccccHHHHHhhcCCCceEeeecccccCCcc--ccc-cc-----cHHHHHhCCCCEEEeCchhhccccccChHHHHHH
Q 025540 42 VSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGA--FTG-EI-----SAEMLVNLEIPWVILGHSERRLILNELNEFVGDK 113 (251)
Q Consensus 42 i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga--~TG-ei-----S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~K 113 (251)
+.|++-.+..+.+.+.-++.+ |=....|- |+- |+ ...+++++|++.+.+|=--. =++-|....++
T Consensus 36 lTPS~g~i~~~~~~~~ipv~v----MIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~---dg~iD~~~~~~ 108 (256)
T 1twd_A 36 LTPSLGVLKSVRQRVTIPVHP----IIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDV---DGNVDMPRMEK 108 (256)
T ss_dssp BCCCHHHHHHHHHHCCSCEEE----BCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT---TSSBCHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCceEE----EECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECC---CCCcCHHHHHH
Confidence 669988888877664312211 11112232 332 22 55688999999999997633 24566666666
Q ss_pred HHHHHHCCCeEEEE--eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHH
Q 025540 114 VAYALSQGLKVIAC--VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRK 191 (251)
Q Consensus 114 v~~al~~gl~pIlC--iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~ 191 (251)
+..+. .|+...+- +.... ....-.+||... + .+++. =+|..++. .+-...|++
T Consensus 109 Li~~a-~~~~vTFHRAfD~~~-------d~~~ale~L~~l--G---~~rIL---------TSG~~~~a---~~g~~~L~~ 163 (256)
T 1twd_A 109 IMAAA-GPLAVTFHRAFDMCA-------NPLYTLNNLAEL--G---IARVL---------TSGQKSDA---LQGLSKIME 163 (256)
T ss_dssp HHHHH-TTSEEEECGGGGGCS-------CHHHHHHHHHHH--T---CCEEE---------ECTTSSST---TTTHHHHHH
T ss_pred HHHHh-CCCcEEEECchhccC-------CHHHHHHHHHHc--C---CCEEE---------CCCCCCCH---HHHHHHHHH
Confidence 66544 58876661 11111 111123333332 2 23332 13444442 233445555
Q ss_pred HHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcC
Q 025540 192 WLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGG 234 (251)
Q Consensus 192 ~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~ 234 (251)
.+.. . + .+.|+-||+|+++|+.++. ..+++-+=.++
T Consensus 164 Lv~~-a----~-~i~Im~GgGv~~~Ni~~l~-~tGv~e~H~Sa 199 (256)
T 1twd_A 164 LIAH-R----D-APIIMAGAGVRAENLHHFL-DAGVLEVHSSA 199 (256)
T ss_dssp HHTS-S----S-CCEEEEESSCCTTTHHHHH-HHTCSEEEECC
T ss_pred HHHh-h----C-CcEEEecCCcCHHHHHHHH-HcCCCeEeECC
Confidence 5432 1 2 7899999999999999998 77777766543
No 182
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=60.32 E-value=54 Score=30.50 Aligned_cols=124 Identities=18% Similarity=0.120 Sum_probs=66.9
Q ss_pred ccccccHHHHHhCCCCEEEeC-chhhccc-----ccc--ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHH
Q 025540 75 FTGEISAEMLVNLEIPWVILG-HSERRLI-----LNE--LNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAA 146 (251)
Q Consensus 75 ~TGeiS~~mLkd~G~~~viiG-HSERR~~-----f~E--td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~ 146 (251)
|.-+-..+.+|++|++.|=|. +.++-.+ .++ .-+.+.+-|..|.++||.+||.+.... .....+.+...+
T Consensus 39 ~~~~~d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~~--~~~~~~~~~~~~ 116 (491)
T 2y8k_A 39 AAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGNGA--NNGNHNAQWARD 116 (491)
T ss_dssp CCCHHHHGGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHHHHHHHHHHHHTCEEEEEEECTT--CTTCCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECceeecccccCCCccChhHHHHHHHHHHHHHHHCCCEEEEECCCCC--CCccccHHHHHH
Confidence 344566788999999998553 1111111 122 135677889999999999999987531 111122333333
Q ss_pred HHHHHHhccCCCCCeEEEE----ccc-CccCCCC-CC----CHHHHHHHHHHHHHHHHhcCCccccCcceEEEcc
Q 025540 147 QTKAIADRVSSWSNIVLAY----EPV-WAIGTGK-VA----TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211 (251)
Q Consensus 147 Ql~~~l~~i~~~~~~iIAY----EPv-WAIGtG~-~a----~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGG 211 (251)
-++.+........+ +| | ||. |.-.... .. =.+..+++++.||+. +.+-.|+.||
T Consensus 117 ~w~~iA~ryk~~p~-Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~---------dp~~~I~v~g 180 (491)
T 2y8k_A 117 FWKFYAPRYAKETH-VL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTY---------APETPVLLFS 180 (491)
T ss_dssp HHHHHHHHHTTCTT-EE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHH---------CTTSCEEEEE
T ss_pred HHHHHHHHhCCCCc-eE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhh---------CCCcEEEEec
Confidence 33333332222233 33 6 674 3210000 00 134557788888875 4456788876
No 183
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=60.19 E-value=13 Score=33.21 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+|++++++++.++ .+++|.-=|+|+++|+.+++. .++|++-||+...+
T Consensus 238 ~~~~~l~~av~~i~------------~~v~ieaSGGI~~~~i~~~a~-tGVD~isvG~lt~s 286 (298)
T 3gnn_A 238 FTLDMMRDAVRVTE------------GRAVLEVSGGVNFDTVRAIAE-TGVDRISIGALTKD 286 (298)
T ss_dssp CCHHHHHHHHHHHT------------TSEEEEEESSCSTTTHHHHHH-TTCSEEECGGGGTS
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEEcCCCHHHHHHHHH-cCCCEEEECCeecC
Confidence 46888887776552 358899999999999999885 89999999987654
No 184
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=60.15 E-value=21 Score=29.37 Aligned_cols=83 Identities=16% Similarity=0.061 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccC--CCCCCCHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIG--TGKVATPAQA 182 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIG--tG~~a~~e~i 182 (251)
.-+.+.+-+..|.+.|...|++ .|............+.+.+.++.+.+... ...+.|++||.---+ +....+++++
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~l~~E~~~~~~~~~~~~~~~~~~ 161 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFA-PHGKRILVEALSPGVKPHYLFSSQYQA 161 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHG-GGTCEEEECCCCTTTSTTBSCCSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HcCCEEEEEeCCccCCCcCccCCHHHH
Confidence 4456678888888899887766 35321100000111223333333332211 235889999972111 2233567766
Q ss_pred HHHHHHH
Q 025540 183 QEVHFEL 189 (251)
Q Consensus 183 ~~~~~~I 189 (251)
.++++.+
T Consensus 162 ~~l~~~~ 168 (260)
T 1k77_A 162 LAIVEEV 168 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5554443
No 185
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=59.82 E-value=21 Score=29.90 Aligned_cols=79 Identities=13% Similarity=-0.026 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHH
Q 025540 107 NEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEV 185 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~ 185 (251)
-+.+.+-+..|.+.|...|++ .|-...........+.+.+.|+.+.+.. ....+.++|||.+ +....+++++.++
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~~---~~~~~~~~~~~~l 158 (286)
T 3dx5_A 83 IEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELF-AQHNMYVLLETHP---NTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHH-HHTTCEEEEECCT---TSTTSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHH-HHhCCEEEEecCC---CcCcCCHHHHHHH
Confidence 455667788888888887754 4542211100011222333333333211 1235788889864 1222466665555
Q ss_pred HHHH
Q 025540 186 HFEL 189 (251)
Q Consensus 186 ~~~I 189 (251)
++.+
T Consensus 159 ~~~~ 162 (286)
T 3dx5_A 159 LGEV 162 (286)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 4443
No 186
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=59.57 E-value=11 Score=30.15 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+.+.+.++++.+|+. + .++++|+.||.+.+... +.+...++|+++..++++.
T Consensus 81 ~~~~~~~~~i~~L~~~-----g---~~~i~v~vGG~~~~~~~-~~l~~~G~d~v~~~~~~~~ 133 (161)
T 2yxb_A 81 AHLHLMKRLMAKLREL-----G---ADDIPVVLGGTIPIPDL-EPLRSLGIREIFLPGTSLG 133 (161)
T ss_dssp CHHHHHHHHHHHHHHT-----T---CTTSCEEEEECCCHHHH-HHHHHTTCCEEECTTCCHH
T ss_pred hhHHHHHHHHHHHHhc-----C---CCCCEEEEeCCCchhcH-HHHHHCCCcEEECCCCCHH
Confidence 4577778788777763 1 13599999998866554 3567799999888787653
No 187
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=59.41 E-value=4.7 Score=36.88 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=34.7
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-+|.++++.+.+++....+|++.+|++.+. |++.
T Consensus 301 ~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~ 340 (376)
T 1icp_A 301 KGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLP 340 (376)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCccHH
Confidence 47999999999999999999888999999999996 6643
No 188
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=59.40 E-value=8 Score=29.99 Aligned_cols=63 Identities=11% Similarity=0.121 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-Cc-ccH---HHHhcCCCCCEEEEcCccCchHHHHHHH
Q 025540 176 VATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NG-ANC---KELAAQPDVDGFLVGGASLKPEFIDIIK 246 (251)
Q Consensus 176 ~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~-~n~---~~l~~~~~vDG~LVG~asl~~~F~~Ii~ 246 (251)
+.+.+++.++++.+|+. + .++++|+.||.. .+ +.. .+.+...++|+++--|....+-...+.+
T Consensus 65 ~~~~~~~~~~i~~l~~~-----g---~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~~~~~~~l~~ 132 (137)
T 1ccw_A 65 GQGEIDCKGLRQKCDEA-----G---LEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPEVGIADLKK 132 (137)
T ss_dssp STHHHHHTTHHHHHHHT-----T---CTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhc-----C---CCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCHHHHHHHHHH
Confidence 34566777777777753 1 225899999984 43 332 4578889999999777765543333333
No 189
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=58.80 E-value=16 Score=31.79 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHCCCeEEEE
Q 025540 108 EFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC 127 (251)
+.+.+-+..|.+.|...|++
T Consensus 109 ~~~~~~i~~A~~lG~~~v~~ 128 (335)
T 2qw5_A 109 EYLKSRVDITAALGGEIMMG 128 (335)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEec
Confidence 45667777888888887755
No 190
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=58.56 E-value=9.4 Score=34.47 Aligned_cols=47 Identities=21% Similarity=0.131 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|++++++++.++ .+++|.-=|+++++|+.+++. .+||++-||...
T Consensus 260 ~~~~~l~~av~~l~------------~~v~ieaSGGIt~~~I~~~a~-tGVD~isvGalt 306 (320)
T 3paj_A 260 FSLEMMREAVKINA------------GRAALENSGNITLDNLKECAE-TGVDYISVGALT 306 (320)
T ss_dssp CCHHHHHHHHHHHT------------TSSEEEEESSCCHHHHHHHHT-TTCSEEECTHHH
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEECCCCHHHHHHHHH-cCCCEEEECcee
Confidence 47888888776654 358899999999999999886 789999999843
No 191
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=58.37 E-value=24 Score=31.65 Aligned_cols=63 Identities=10% Similarity=-0.092 Sum_probs=41.5
Q ss_pred ceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhcccc
Q 025540 37 VVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLIL 103 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f 103 (251)
+.+.++.+-.+....+.+... -++.+-+ |+.. |..|...|.+.|+++|++.|+.|++-=|...
T Consensus 202 GAd~i~~e~~~~~e~~~~i~~~l~~P~la-n~~~---~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~ 265 (318)
T 1zlp_A 202 GADATFVEAPANVDELKEVSAKTKGLRIA-NMIE---GGKTPLHTPEEFKEMGFHLIAHSLTAVYATA 265 (318)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHSCSEEEE-EECT---TSSSCCCCHHHHHHHTCCEEEECSHHHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHhcCCCEEE-Eecc---CCCCCCCCHHHHHHcCCeEEEEchHHHHHHH
Confidence 455566554444444433332 2355555 7653 4467889999999999999999999776543
No 192
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=57.24 E-value=57 Score=30.36 Aligned_cols=124 Identities=15% Similarity=0.054 Sum_probs=67.4
Q ss_pred cHHHHHhCCCCEEEeCchhhccc----------------ccc-ChHHHHHHHHHHHHCCCeEEEEeCCcHHHH------h
Q 025540 80 SAEMLVNLEIPWVILGHSERRLI----------------LNE-LNEFVGDKVAYALSQGLKVIACVGETLEQR------E 136 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~----------------f~E-td~~i~~Kv~~al~~gl~pIlCiGE~~~~r------~ 136 (251)
..+.+++.|.+.|=+--+-.|.. .++ .-+.+.+-|..|.++||.+|+++=...... .
T Consensus 89 ~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~~~~W~~ 168 (458)
T 3qho_A 89 MLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHIEPLWYT 168 (458)
T ss_dssp HHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSCCSSSCB
T ss_pred HHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccCCCccCC
Confidence 45678999999987754433311 111 235677889999999999999874321000 0
Q ss_pred cCCcHHHHHHHHHHHHhccCCCCCeEEEE----cccCcc--------------CCCCCCC--HHHHHHHHHHHHHHHHhc
Q 025540 137 AGSTMDVVAAQTKAIADRVSSWSNIVLAY----EPVWAI--------------GTGKVAT--PAQAQEVHFELRKWLLAN 196 (251)
Q Consensus 137 ~g~~~~~~~~Ql~~~l~~i~~~~~~iIAY----EPvWAI--------------GtG~~a~--~e~i~~~~~~IR~~l~~~ 196 (251)
...+.+...+-.+.+.+..... +-+|+| ||.-.- |.+.+++ ...++++.+.||+.
T Consensus 169 ~~~~~~~~~~~w~~lA~ryk~~-p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~---- 243 (458)
T 3qho_A 169 EDFSEEDFINTWIEVAKRFGKY-WNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKV---- 243 (458)
T ss_dssp TTBCHHHHHHHHHHHHHHHTTS-TTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHH----
T ss_pred chhhHHHHHHHHHHHHHHhCCC-CCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHh----
Confidence 0012222222222222222222 334555 565321 1122222 34578888899875
Q ss_pred CCccccCcceEEEccCC
Q 025540 197 TSPEIAAATRIIYGGSV 213 (251)
Q Consensus 197 ~~~~~~~~i~ilYGGSV 213 (251)
+.+..|++||--
T Consensus 244 -----dp~~lIiv~G~~ 255 (458)
T 3qho_A 244 -----APHWLIFVEGTQ 255 (458)
T ss_dssp -----CTTCEEEECCBS
T ss_pred -----CCCCEEEEcCCc
Confidence 456788888754
No 193
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=57.00 E-value=59 Score=33.35 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=31.9
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc--h-HHHHHHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK--P-EFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~--~-~F~~Ii~~ 247 (251)
++||+.-|+| +++.+.+++. .+.|++.||++.+. + -+.++.+.
T Consensus 787 ~ipvi~~GGI~s~~da~~~l~-~Ga~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 787 GFPILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp TCCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTSCTTHHHHHHHH
T ss_pred CCCEEEecCcCCHHHHHHHHH-cCCCEEEEeeccccCCccHHHHHHHH
Confidence 4899999999 5566777666 79999999998884 3 34444443
No 194
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=56.87 E-value=22 Score=29.95 Aligned_cols=79 Identities=19% Similarity=0.098 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEe--CCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHH
Q 025540 107 NEFVGDKVAYALSQGLKVIACV--GETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQE 184 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlCi--GE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~ 184 (251)
-+.+.+-+..|.+.|...|++. |... .....+..+.+.+.++.+.+.. .+ +.|++||..--.+....+++++.+
T Consensus 112 ~~~~~~~i~~A~~lG~~~v~~~~~g~~~-~~~~~~~~~~~~~~l~~l~~~a--~~-v~l~lEn~~~~~~~~~~~~~~~~~ 187 (290)
T 2zvr_A 112 IERVVKHTEVAGMFGALVIIGLVRGRRE-GRSYEETEELFIESMKRLLELT--EH-AKFVIEPLNRYETDFINTIDDALR 187 (290)
T ss_dssp HHHHHHHHHHHHHHTCEEEESGGGCCCT-TSCHHHHHHHHHHHHHHHHHHC--SS-CCEEECCCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCCCC-CcCHHHHHHHHHHHHHHHHHHh--cc-CEEEEEeCCCcCccccCCHHHHHH
Confidence 3556778888889999888744 5310 0000011223334444443322 22 889999973112334457777666
Q ss_pred HHHHH
Q 025540 185 VHFEL 189 (251)
Q Consensus 185 ~~~~I 189 (251)
+++.+
T Consensus 188 l~~~~ 192 (290)
T 2zvr_A 188 ILRKI 192 (290)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 55544
No 195
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=56.81 E-value=15 Score=31.09 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEEeCCcH-HHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHH
Q 025540 107 NEFVGDKVAYALSQGLKVIACVGETL-EQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEV 185 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlCiGE~~-~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~ 185 (251)
-+.+.+-+..|.+.|...|++.|-.. ......+..+.+.+.|+.+.+... ...+.|++||.+ +....+++++.++
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~Gv~l~lEn~~---~~~~~~~~~~~~l 182 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMAS-RAQVTLAMEIMD---YPLMNSISKALGY 182 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHH-HHTCEEEEECCS---SGGGCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHH-HhCCEEEEeeCC---CcccCCHHHHHHH
Confidence 34566777778888887776654321 000000011222333333222111 124778889875 1223466665555
Q ss_pred HHHH
Q 025540 186 HFEL 189 (251)
Q Consensus 186 ~~~I 189 (251)
++.+
T Consensus 183 ~~~v 186 (295)
T 3cqj_A 183 AHYL 186 (295)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 5444
No 196
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=56.41 E-value=29 Score=30.23 Aligned_cols=88 Identities=11% Similarity=0.197 Sum_probs=56.5
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccCc-------------cCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-EEE
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVWA-------------IGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-IIY 209 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvWA-------------IGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-ilY 209 (251)
|..+++..++.+. .+.+|.|+|.|. .|.|..+||.+++++.+.||+. +++ |+|
T Consensus 177 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~If~ 243 (291)
T 1pq4_A 177 LNQELGQILQPLP--QRKFIVFHPSWAYFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKEN-----------NLTMVFG 243 (291)
T ss_dssp HHHHHHHHHTTCS--CCEEEESSCCCHHHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTT-----------TCCEEEE
T ss_pred HHHHHHHHHhCCC--CCEEEEECCchHHHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHc-----------CCCEEEE
Confidence 4444555555442 455777888763 4557889999999999999853 455 567
Q ss_pred ccCCCcccHHHHhcCCCCCEEEEcCccCchHHHHHHH
Q 025540 210 GGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246 (251)
Q Consensus 210 GGSV~~~n~~~l~~~~~vDG~LVG~asl~~~F~~Ii~ 246 (251)
--.+++..+..++...++-=+.+ -+|..+|.++++
T Consensus 244 e~~~~~~~~~~ia~~~g~~v~~l--d~l~~~Y~~~m~ 278 (291)
T 1pq4_A 244 ETQFSTKSSEAIAAEIGAGVELL--DPLAADWSSNLK 278 (291)
T ss_dssp ETTSCCHHHHHHHHHHTCEEEEE--CTTCSSHHHHHH
T ss_pred eCCCChHHHHHHHHHcCCeEEEE--cCchhhHHHHHH
Confidence 88888888888877766543322 122234555554
No 197
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=56.28 E-value=13 Score=31.19 Aligned_cols=147 Identities=10% Similarity=0.061 Sum_probs=93.1
Q ss_pred eeEEEcCccccHHHHHhhcC--CCceEeeecccccCCccccccccHHHHHh-CCCCEEEeCchhhccccccChHHHHHHH
Q 025540 38 VEVVVSPPFVFLGLVKSSLR--PGFHVAAQNCWVKKGGAFTGEISAEMLVN-LEIPWVILGHSERRLILNELNEFVGDKV 114 (251)
Q Consensus 38 ~~v~i~Pp~~~L~~~~~~~~--~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd-~G~~~viiGHSERR~~f~Etd~~i~~Kv 114 (251)
+-+++.-....|..+.+.++ .+..+- |++- -.|=-.-+...+.|++ .+++++|-=|+ .-+
T Consensus 32 ~ifll~g~i~~l~~~v~~lk~~~K~v~V--h~Dl-i~Gls~d~~ai~fL~~~~~pdGIIsTk~--------------~~i 94 (192)
T 3kts_A 32 YMVMLETHVAQLKALVKYAQAGGKKVLL--HADL-VNGLKNDDYAIDFLCTEICPDGIISTRG--------------NAI 94 (192)
T ss_dssp EEEECSEETTTHHHHHHHHHHTTCEEEE--EGGG-EETCCCSHHHHHHHHHTTCCSEEEESCH--------------HHH
T ss_pred EEEEecCcHHHHHHHHHHHHHcCCeEEE--ecCc-hhccCCcHHHHHHHHhCCCCCEEEeCcH--------------HHH
Confidence 33444445556677666665 332222 5542 2233445678899998 49999987665 678
Q ss_pred HHHHHCCCeEEEEe--CCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHH
Q 025540 115 AYALSQGLKVIACV--GETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKW 192 (251)
Q Consensus 115 ~~al~~gl~pIlCi--GE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~ 192 (251)
+.|.+.||.+|.=+ =++.. ++..++.++..++..+=+=| |. -|+ +.+.+|+.
T Consensus 95 ~~Ak~~gL~tIqR~FliDS~a--------------l~~~~~~i~~~~PD~iEiLP------Gi--~p~----iI~~i~~~ 148 (192)
T 3kts_A 95 MKAKQHKMLAIQRLFMIDSSA--------------YNKGVALIQKVQPDCIELLP------GI--IPE----QVQKMTQK 148 (192)
T ss_dssp HHHHHTTCEEEEEEECCSHHH--------------HHHHHHHHHHHCCSEEEEEC------TT--CHH----HHHHHHHH
T ss_pred HHHHHCCCeEEEEEEEEEcch--------------HHHHHHHHhhcCCCEEEECC------ch--hHH----HHHHHHHh
Confidence 89999999877422 12221 11222222223455555556 32 254 44455554
Q ss_pred HHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccC
Q 025540 193 LLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 193 l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
+ ++||+-||-|+.....+-+-..+.|++-.|...|
T Consensus 149 ~----------~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 149 L----------HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp H----------CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred c----------CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 3 3899999999999999999999999999998765
No 198
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=56.03 E-value=95 Score=29.87 Aligned_cols=119 Identities=12% Similarity=0.068 Sum_probs=72.6
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcH--HHHhcCCcHHHHHHHHHHHHhccCCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETL--EQREAGSTMDVVAAQTKAIADRVSSW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~--~~r~~g~~~~~~~~Ql~~~l~~i~~~ 158 (251)
.++||++|++.|=+=|-+-+.. .+ +-+..+-++||.+|+.+.... -.+......+...++++..++.....
T Consensus 93 i~LmK~~GiN~VRvy~~~P~~~---~d----~~ldl~~~~GIyVIle~~~p~~~i~~~~P~~~~~~~~r~~~~V~ry~nh 165 (555)
T 2w61_A 93 IPFLKMLGVNTLRVYAIDPTKS---HD----ICMEALSAEGMYVLLDLSEPDISINRENPSWDVHIFERYKSVIDAMSSF 165 (555)
T ss_dssp HHHHHHHTCSEEEECCCCTTSC---CH----HHHHHHHHTTCEEEEESCBTTBSCCTTSCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEeccCCCCC---hH----HHHHHHHhcCCEEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4678999999997755554321 13 567788999999999975321 11222234444555566655544333
Q ss_pred CCeE---EEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC
Q 025540 159 SNIV---LAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 212 (251)
Q Consensus 159 ~~~i---IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS 212 (251)
.+++ +.-|+.. |........++..+++.+|+++++.. -+.|+|=|-+.
T Consensus 166 P~Vi~W~vGNE~~~--~~~~~~~~~y~~aa~r~~~~~lk~~d----~R~IpVgy~~a 216 (555)
T 2w61_A 166 PNLLGYFAGNQVTN--DHTNTFASPFVKAAIRDAKEYISHSN----HRKIPVGYSTN 216 (555)
T ss_dssp TTEEEEEEEESSSC--STTCGGGHHHHHHHHHHHHHHHHHSS----SCCCCEEEEEC
T ss_pred CcEEEEEeCccccC--CCccchhhHHHHHHHHHHHHHHHhcC----CCcceeecccc
Confidence 3433 3457642 22222345678888999999998752 23478888774
No 199
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=54.82 E-value=64 Score=27.72 Aligned_cols=133 Identities=17% Similarity=0.098 Sum_probs=68.0
Q ss_pred ccccccHHHHH-hCCCCEEEeCchhhc-ccc-ccC-hHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHH
Q 025540 75 FTGEISAEMLV-NLEIPWVILGHSERR-LIL-NEL-NEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA 150 (251)
Q Consensus 75 ~TGeiS~~mLk-d~G~~~viiGHSERR-~~f-~Et-d~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~ 150 (251)
|.-+-+...|+ +.|++.|=+-|.-.. .++ ++. -+.+.+-+..|.++||.+|+-+=.... .+.....+...+..+.
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~-~~~~~~~~~~~~~w~~ 121 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSD-NDPNIYKEEAKDFFDE 121 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSS-CSTTTTHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCC-CCchHHHHHHHHHHHH
Confidence 43344556676 899999977664311 111 222 345567789999999999998754311 0111222222333333
Q ss_pred HHhccCCCCCeEEEEccc-CccCCCCCC--C-HHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHH
Q 025540 151 IADRVSSWSNIVLAYEPV-WAIGTGKVA--T-PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCK 219 (251)
Q Consensus 151 ~l~~i~~~~~~iIAYEPv-WAIGtG~~a--~-~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~ 219 (251)
+......... || ||.. .--+....- . .+..+++.+.||+. +.+-+|++||.--..+..
T Consensus 122 ia~r~~~~~~-Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~---------dp~~~I~v~~~~w~~~~~ 183 (303)
T 7a3h_A 122 MSELYGDYPN-VI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNN---------DPNNIIIVGTGTWSQDVH 183 (303)
T ss_dssp HHHHHTTCTT-EE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTT---------CSSSCEEECCHHHHTBHH
T ss_pred HHHHhCCCCe-EE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhh---------CCCCEEEEeCCCcccchh
Confidence 3332222333 45 7532 001111111 1 24567777788754 445678888764333333
No 200
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.40 E-value=8.9 Score=33.51 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=33.5
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc--hH-HHHHHHH
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK--PE-FIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~--~~-F~~Ii~~ 247 (251)
++||+..|+|+ ++++.+++. .+.|++.||++.+. +. |.+|.+.
T Consensus 244 ~ipvi~~GGI~~~~da~~~l~-~GAd~V~ig~~~l~~~p~~~~~i~~~ 290 (314)
T 2e6f_A 244 DKLVFGCGGVYSGEDAFLHIL-AGASMVQVGTALQEEGPGIFTRLEDE 290 (314)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-HTCSSEEECHHHHHHCTTHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEEchhhHhcCcHHHHHHHHH
Confidence 59999999996 778888774 68999999999883 43 5555544
No 201
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=54.40 E-value=82 Score=28.65 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=43.5
Q ss_pred CCceEeeecccccCCccccc--cccHHHHHhCCCCEEEeCc-hhhc--------------cccc--------c-ChHHHH
Q 025540 58 PGFHVAAQNCWVKKGGAFTG--EISAEMLVNLEIPWVILGH-SERR--------------LILN--------E-LNEFVG 111 (251)
Q Consensus 58 ~~i~vgAQn~~~~~~Ga~TG--eiS~~mLkd~G~~~viiGH-SERR--------------~~f~--------E-td~~i~ 111 (251)
.++.+..-|+++..... .- +--.++++++|++.|=+.| ++.. -.|+ | .-+.+.
T Consensus 25 kp~~f~G~N~y~~~~~~-~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD 103 (383)
T 3pzg_A 25 KEFRFIGSNNYYMHYKS-NRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLD 103 (383)
T ss_dssp --CCEEEEECSCTTTSC-HHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHH
T ss_pred EEEEEEEEEecccccCC-HHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHH
Confidence 35666667777654311 11 1235678899999987754 3221 1121 1 134566
Q ss_pred HHHHHHHHCCCeEEEEeCC
Q 025540 112 DKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 112 ~Kv~~al~~gl~pIlCiGE 130 (251)
+-+..|.++||.+||++..
T Consensus 104 ~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 104 YTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHHHHTCEEEEECCB
T ss_pred HHHHHHHHCCCEEEEEccc
Confidence 7888899999999999864
No 202
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=53.94 E-value=23 Score=31.00 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=67.5
Q ss_pred HhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEE
Q 025540 85 VNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLA 164 (251)
Q Consensus 85 kd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIA 164 (251)
+.+|++.|++=-+= + +++.+..=...|.+.||.+++-|=... +++.++. ...-+|-
T Consensus 123 r~~GADaILLI~a~----L--~~~~l~~l~~~A~~lGl~~LvEVh~~~--------------El~rAl~----~~a~iIG 178 (258)
T 4a29_A 123 YNLGADTVLLIVKI----L--TERELESLLEYARSYGMEPLILINDEN--------------DLDIALR----IGARFIG 178 (258)
T ss_dssp HHHTCSEEEEEGGG----S--CHHHHHHHHHHHHHTTCCCEEEESSHH--------------HHHHHHH----TTCSEEE
T ss_pred HHcCCCeeehHHhh----c--CHHHHHHHHHHHHHHhHHHHHhcchHH--------------HHHHHhc----CCCcEEE
Confidence 44588888763321 1 456677788899999999999886432 2223443 1111221
Q ss_pred EcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 165 YEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 165 YEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
+=- +-.-|-. .+.+...+ ++ ... ..++.++--++++.......+...++||+|||.+-++
T Consensus 179 INN-RnL~tf~-vdl~~t~~----L~----~~i----p~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr 238 (258)
T 4a29_A 179 IMS-RDFETGE-INKENQRK----LI----SMI----PSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMR 238 (258)
T ss_dssp ECS-BCTTTCC-BCHHHHHH----HH----TTS----CTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHH
T ss_pred EeC-CCccccc-cCHHHHHH----HH----hhC----CCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhC
Confidence 100 0001111 12333222 11 222 2346677778887777777788899999999988776
No 203
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=53.85 E-value=17 Score=32.13 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=40.7
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.+|..-|. +|++++++++.++ ..+++.-=|+|+++|+.+++. .++|++-||++-
T Consensus 218 D~I~ld~~---------~~~~~k~av~~v~------------~~ipi~AsGGIt~eni~~~a~-tGvD~IsVgs~~ 271 (286)
T 1x1o_A 218 DLILLDNF---------PLEALREAVRRVG------------GRVPLEASGNMTLERAKAAAE-AGVDYVSVGALT 271 (286)
T ss_dssp SEEEEESC---------CHHHHHHHHHHHT------------TSSCEEEESSCCHHHHHHHHH-HTCSEEECTHHH
T ss_pred CEEEECCC---------CHHHHHHHHHHhC------------CCCeEEEEcCCCHHHHHHHHH-cCCCEEEEcHHH
Confidence 45666663 7788776665543 247899999999999999876 789999998743
No 204
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=53.45 E-value=39 Score=28.26 Aligned_cols=21 Identities=14% Similarity=0.032 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEE
Q 025540 107 NEFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlC 127 (251)
-+.+.+-+..|.+.|...|++
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~ 121 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGL 121 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEE
Confidence 345556677777777776665
No 205
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=53.03 E-value=1.1e+02 Score=26.37 Aligned_cols=160 Identities=19% Similarity=0.107 Sum_probs=91.0
Q ss_pred cCCCHHHHHHHHHHhhccCCCCCCceeEEEc------CccccHHHHHhhcC--CCceEeeecccccCCccccccccHHHH
Q 025540 13 CNGTPEEVKKIVSVLNEGQVPSSDVVEVVVS------PPFVFLGLVKSSLR--PGFHVAAQNCWVKKGGAFTGEISAEML 84 (251)
Q Consensus 13 mn~~~~~~~~~~~~l~~~~~~~~~~~~v~i~------Pp~~~L~~~~~~~~--~~i~vgAQn~~~~~~Ga~TGeiS~~mL 84 (251)
...+.++..++++.|.+.-. +.+++..+ |.+.....+...+. .++.+.+ +- ...-..+.+
T Consensus 22 ~~~~~e~k~~i~~~L~~~Gv---~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~--l~-------~~~~~i~~a 89 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGL---SVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPV--LT-------PNLKGFEAA 89 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTC---SEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCE--EC-------CSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCc---CEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEE--Ec-------CCHHhHHHH
Confidence 34668888899998877422 34666553 33334444444433 1222111 00 123347889
Q ss_pred HhCCCCEEEeC--chhh------ccccccChHHHHHHHHHHHHCCCeEEEEeCCcHH-HHhcCCcHHHHHHHHHHHHhcc
Q 025540 85 VNLEIPWVILG--HSER------RLILNELNEFVGDKVAYALSQGLKVIACVGETLE-QREAGSTMDVVAAQTKAIADRV 155 (251)
Q Consensus 85 kd~G~~~viiG--HSER------R~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~-~r~~g~~~~~~~~Ql~~~l~~i 155 (251)
.+.|++.+-+- -||- |+...|.-+.+.+-++.|.+.|+.+-+++.-+.. +.+.--+.+.+.+.++.+.+ .
T Consensus 90 ~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 168 (298)
T 2cw6_A 90 VAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYS-M 168 (298)
T ss_dssp HHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHH-T
T ss_pred HHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH-c
Confidence 99999986543 2332 2334455567777789999999998655432110 01111345666666666554 2
Q ss_pred CCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHH
Q 025540 156 SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL 193 (251)
Q Consensus 156 ~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l 193 (251)
. ...+.|+= |--.++|+++.++++.+|+.+
T Consensus 169 G-a~~i~l~D-------T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 169 G-CYEISLGD-------TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp T-CSEEEEEE-------TTSCCCHHHHHHHHHHHHHHS
T ss_pred C-CCEEEecC-------CCCCcCHHHHHHHHHHHHHhC
Confidence 1 23344541 222478999999999999864
No 206
>3hmc_A Putative prophage lambdaba04, glycosyl hydrolase, 25; endolysin; HET: MES; 1.44A {Bacillus anthracis} SCOP: c.1.8.0 PDB: 2nw0_A
Probab=53.02 E-value=85 Score=25.43 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=52.7
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeE---EE-EeCCcHHHHhcCCcHHHHHHHHH
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV---IA-CVGETLEQREAGSTMDVVAAQTK 149 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~p---Il-CiGE~~~~r~~g~~~~~~~~Ql~ 149 (251)
.|.|+|... ++..|+++|+|==+|-..+ .|.....-++.|.++||.. .+ |.+.+.+ -..|.+
T Consensus 12 ~~Qg~idw~-~~~~gi~FviiKateG~~~---~D~~f~~n~~~A~~aGl~vG~Yhf~~~~~~~~----------a~~qA~ 77 (192)
T 3hmc_A 12 KWNGDINWS-IAKQHIDFIIARVQDGSNY---VDPLYKGYVQAMKQHGIPFGNYAFCRFVSIAD----------AKKEAQ 77 (192)
T ss_dssp GGGCSCCHH-HHGGGEEEEEEEEEESTTC---BCSSHHHHHHHHHHTTCCEEEEEECCCCSHHH----------HHHHHH
T ss_pred CCCCCCCHH-HHhCCCCEEEEEEeeCCCc---cChHHHHHHHHHHHcCCeEEEEEEeecCCchH----------HHHHHH
Confidence 367899999 7788999999977775544 3555668899999999973 12 2222211 123555
Q ss_pred HHHhccC-CCCCeEEEEcc
Q 025540 150 AIADRVS-SWSNIVLAYEP 167 (251)
Q Consensus 150 ~~l~~i~-~~~~~iIAYEP 167 (251)
-.+..+. ...++++-+|.
T Consensus 78 ~f~~~~~~~~~p~~lD~E~ 96 (192)
T 3hmc_A 78 DFWNRGDKSATVWVADVEV 96 (192)
T ss_dssp HHHHHSCTTCSCEEEEECS
T ss_pred HHHHhcCcccCceEEEecC
Confidence 5555554 23467889995
No 207
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=52.99 E-value=1e+02 Score=25.91 Aligned_cols=69 Identities=19% Similarity=0.206 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEccc-CccCCCCCCCHHHHHHHH
Q 025540 108 EFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPV-WAIGTGKVATPAQAQEVH 186 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPv-WAIGtG~~a~~e~i~~~~ 186 (251)
+.+.+-+..|.+.|...|++ |-. .+...+.+.+.|+.+.+.. ..+.|+|||. |. ...+++++.+++
T Consensus 105 ~~~~~~i~~A~~lGa~~v~~-g~~-----~~~~~~~~~~~l~~l~~~a---~Gv~l~lE~~~~~----~~~~~~~~~~l~ 171 (296)
T 2g0w_A 105 KKEQTTFHMARLFGVKHINC-GLL-----EKIPEEQIIVALGELCDRA---EELIIGLEFMPYS----GVADLQAAWRVA 171 (296)
T ss_dssp HHHHHHHHHHHHHTCCEEEE-CCC-----SCCCHHHHHHHHHHHHHHH---TTSEEEEECCTTS----SSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEE-cCC-----CCCCHHHHHHHHHHHHHHh---cCCEEEEEecCCC----CCCCHHHHHHHH
Confidence 45667788888889887765 532 1112445555565555432 5688999996 32 245677766655
Q ss_pred HHH
Q 025540 187 FEL 189 (251)
Q Consensus 187 ~~I 189 (251)
+.+
T Consensus 172 ~~v 174 (296)
T 2g0w_A 172 EAC 174 (296)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 208
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=52.18 E-value=46 Score=27.32 Aligned_cols=82 Identities=16% Similarity=0.018 Sum_probs=43.5
Q ss_pred ChHHHHHHHHHHHHCCCeEEEEe-CCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIACV-GETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQE 184 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlCi-GE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~ 184 (251)
.-+.+.+-+..|.+.|...|++. |.........+..+.+.+.++.+.+... ...+.|++||.+--++ ...+++++.+
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~l~lEn~~~~~~-~~~~~~~~~~ 159 (278)
T 1i60_A 82 IITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAE-PYGVKIALEFVGHPQC-TVNTFEQAYE 159 (278)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCTTB-SSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEecCCccc-hhcCHHHHHH
Confidence 34556677888888888877664 3211000000112333344444333211 2368899999864333 3457777766
Q ss_pred HHHHH
Q 025540 185 VHFEL 189 (251)
Q Consensus 185 ~~~~I 189 (251)
+++.+
T Consensus 160 l~~~~ 164 (278)
T 1i60_A 160 IVNTV 164 (278)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66554
No 209
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=52.02 E-value=22 Score=30.94 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=33.3
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~~Ii~~~ 248 (251)
++|||+++-+-...-.+.+...+.||+++|-+.|+ +++.++++.+
T Consensus 113 ~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a 158 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRT 158 (272)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHH
T ss_pred CCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHH
Confidence 48999998765554346667789999999999998 5565555543
No 210
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=51.77 E-value=1e+02 Score=25.57 Aligned_cols=116 Identities=11% Similarity=0.117 Sum_probs=70.0
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEE---EEeCCcHHHHhcCCcHHHHHHHHHH
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI---ACVGETLEQREAGSTMDVVAAQTKA 150 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI---lCiGE~~~~r~~g~~~~~~~~Ql~~ 150 (251)
.|.|+|....|+..|+++|+|==+|=..+ .|.....-++.|.++||..= ++-..+. -.+|.+-
T Consensus 23 ~~Qg~idw~~vk~~gi~FviiKateG~~~---~D~~f~~n~~~A~~aGl~vG~Yhf~~~~s~-----------a~~qA~~ 88 (220)
T 2wag_A 23 SYQGDIDWRELEKQNMKFAFIKATEGSAF---VDKYFSKNWTNANKTSMRVGAYHFFSFDSK-----------GETQAEQ 88 (220)
T ss_dssp GGGCSCCHHHHHTTTCCEEEEEEEETTTE---ECTTHHHHHHHHHTSSSEEEEEEECCTTSC-----------HHHHHHH
T ss_pred CCCCCCCHHHHHHCCCCEEEEEEecCCCc---cChHHHHHHHHHHHCCCeEEEEEEecCCCh-----------HHHHHHH
Confidence 37789999999999999999965655433 35566788999999999642 2222211 1345556
Q ss_pred HHhccCC---CCCeEEEEcccCccCC--CCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEcc
Q 025540 151 IADRVSS---WSNIVLAYEPVWAIGT--GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211 (251)
Q Consensus 151 ~l~~i~~---~~~~iIAYEPvWAIGt--G~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGG 211 (251)
.++.+.. .-++++-+|.. +. ....+++++.+.++..-+.+.+.+| .-++||-.
T Consensus 89 f~~~~~~~~~~lp~~lDvE~~---~~~~~~~~s~~~~~~~~~~f~~~v~~~~G-----~~p~iYt~ 146 (220)
T 2wag_A 89 FIRNVPKYKQALPPVIDVEFY---ANKKDNPPKREDVTKELSVMIEMLEKHYG-----KKVILYAT 146 (220)
T ss_dssp HHHHSCCCTTSCCCEEEECCC---TTGGGSCCCHHHHHHHHHHHHHHHHHHHC-----SCCEEEEC
T ss_pred HHHhccccCCCCceEEEEecc---CCcccCCCCHHHHHHHHHHHHHHHHHHHC-----CceEEEec
Confidence 6666542 23577888862 11 0124666554433333334444332 24799964
No 211
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=51.42 E-value=48 Score=31.09 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=27.7
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+--|+|+ +.++...+. .+.|++.+|++-+.
T Consensus 358 ~ipVia~GGI~~~~di~kala-~GAd~V~iG~~~l~ 392 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALA-LGASTVMMGSLLAA 392 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTTTT
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCeeeECHHHHc
Confidence 58999988886 577777666 58999999997765
No 212
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=51.12 E-value=25 Score=26.35 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=32.6
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
.|...+++|++.||+.||+|+- ++ .-.....++|++++.+...+
T Consensus 53 ~g~~~~~~l~~~gv~~vi~~~i------G~------~a~~~L~~~GI~v~~~~~~~ 96 (124)
T 1eo1_A 53 AGIRTAQIIANNGVKAVIASSP------GP------NAFEVLNELGIKIYRATGTS 96 (124)
T ss_dssp CSTTHHHHHHHTTCCEEEECCS------SH------HHHHHHHHHTCEEEECCSCC
T ss_pred CCHHHHHHHHHCCCCEEEECCc------CH------HHHHHHHHCCCEEEEcCCCC
Confidence 4668899999999999999973 43 22344456799999865544
No 213
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=50.18 E-value=37 Score=29.31 Aligned_cols=26 Identities=19% Similarity=0.087 Sum_probs=23.7
Q ss_pred CccccccccHHHHHhCCCCEEEeCch
Q 025540 72 GGAFTGEISAEMLVNLEIPWVILGHS 97 (251)
Q Consensus 72 ~Ga~TGeiS~~mLkd~G~~~viiGHS 97 (251)
.|.+|-..|.+.|+++|++.|+.|.+
T Consensus 213 ~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 213 PVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp TTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred CCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 45678899999999999999999998
No 214
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=49.68 E-value=17 Score=30.41 Aligned_cols=44 Identities=30% Similarity=0.305 Sum_probs=33.2
Q ss_pred cceEEEccCCCc------ccHHHHhcCCCCCEEEEcCccCc--hHHHHHHHH
Q 025540 204 ATRIIYGGSVNG------ANCKELAAQPDVDGFLVGGASLK--PEFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~------~n~~~l~~~~~vDG~LVG~asl~--~~F~~Ii~~ 247 (251)
++||..++..++ +...+.+...++||+.++....+ ..+.+.++.
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~ 131 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIARE 131 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHH
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHH
Confidence 368888887787 67778888899999999976665 356555554
No 215
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=49.64 E-value=36 Score=30.09 Aligned_cols=60 Identities=13% Similarity=0.067 Sum_probs=38.2
Q ss_pred ceeEEEcCccccH---HHHHhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccc
Q 025540 37 VVEVVVSPPFVFL---GLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLI 102 (251)
Q Consensus 37 ~~~v~i~Pp~~~L---~~~~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~ 102 (251)
+.+.++.+..+.. ..+.+.+. +.+-+ |+-. |..|...+.+.|+++|++.|++|++-=|..
T Consensus 180 GAd~i~~e~~~~~~~~~~i~~~~~--iP~~~-N~~~---~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa 242 (295)
T 1xg4_A 180 GAEMLFPEAITELAMYRQFADAVQ--VPILA-NITE---FGATPLFTTDELRSAHVAMALYPLSAFRAM 242 (295)
T ss_dssp TCSEEEETTCCSHHHHHHHHHHHC--SCBEE-ECCS---SSSSCCCCHHHHHHTTCSEEEESSHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHcC--CCEEE-Eecc---cCCCCCCCHHHHHHcCCCEEEEChHHHHHH
Confidence 4555555544443 34444443 22222 4432 335788999999999999999999977654
No 216
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=49.60 E-value=92 Score=26.81 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=33.7
Q ss_pred ccccccHHHHHhCCCCEEEeCchhhc-------ccccc-ChHHHHHHHHHHHHCCCeEEEEeC
Q 025540 75 FTGEISAEMLVNLEIPWVILGHSERR-------LILNE-LNEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 75 ~TGeiS~~mLkd~G~~~viiGHSERR-------~~f~E-td~~i~~Kv~~al~~gl~pIlCiG 129 (251)
++-+-..+.|++.|++.|=+.=+-.+ -.+++ .-+.+.+-|..|.++||.+|+.+-
T Consensus 28 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh 90 (343)
T 1ceo_A 28 FITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMH 90 (343)
T ss_dssp HSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 33344556777888877755422111 01121 234566788999999999999764
No 217
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=49.59 E-value=13 Score=30.56 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=32.1
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hH-HHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~-F~~Ii~~ 247 (251)
++|++.+|.++.-...+.+...++|++.+|...+. ++ +.++++.
T Consensus 77 ~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHH
Confidence 48999999888544445555578999999999886 44 5566554
No 218
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=49.28 E-value=97 Score=25.27 Aligned_cols=75 Identities=15% Similarity=0.046 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-CCcHHHHhcCCcHHHH-HHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHH
Q 025540 108 EFVGDKVAYALSQGLKVIACV-GETLEQREAGSTMDVV-AAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEV 185 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlCi-GE~~~~r~~g~~~~~~-~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~ 185 (251)
+.+.+-+..|.+.|...|++. |... .+..+.+ .+.++.+.+... ...+.|++||.. -.+....+++++.++
T Consensus 85 ~~~~~~i~~a~~lG~~~v~~~~g~~~-----~~~~~~~~~~~l~~l~~~a~-~~gv~l~~E~~~-~~~~~~~~~~~~~~l 157 (272)
T 2q02_A 85 KKTEGLLRDAQGVGARALVLCPLNDG-----TIVPPEVTVEAIKRLSDLFA-RYDIQGLVEPLG-FRVSSLRSAVWAQQL 157 (272)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSS-----BCCCHHHHHHHHHHHHHHHH-TTTCEEEECCCC-STTCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEccCCCc-----hhHHHHHHHHHHHHHHHHHH-HcCCEEEEEecC-CCcccccCHHHHHHH
Confidence 345677888888898877653 3221 0233334 445544443211 245889999985 222344567766655
Q ss_pred HHHH
Q 025540 186 HFEL 189 (251)
Q Consensus 186 ~~~I 189 (251)
++.+
T Consensus 158 ~~~v 161 (272)
T 2q02_A 158 IREA 161 (272)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 219
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=49.02 E-value=9.7 Score=32.83 Aligned_cols=43 Identities=14% Similarity=-0.116 Sum_probs=34.2
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCchHHHHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 246 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~~~F~~Ii~ 246 (251)
++||+.++-+....-.+.+...+.||+++|.+.+++.+.++++
T Consensus 106 ~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~ 148 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGAYLE 148 (254)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHH
T ss_pred CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHHHHHH
Confidence 4899999998888666668889999999999988744455544
No 220
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.79 E-value=81 Score=29.24 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=25.9
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccC
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
++||+--|+| ++..+...+. .+.|++.+|++-+
T Consensus 340 ~ipvia~GGI~~~~di~kala-~GAd~V~iGr~~l 373 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALA-AGAESVMVGSIFA 373 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHh
Confidence 5899998888 5666666665 5899999998764
No 221
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=48.28 E-value=37 Score=29.90 Aligned_cols=74 Identities=7% Similarity=0.125 Sum_probs=50.3
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccC---------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcce-E
Q 025540 144 VAAQTKAIADRVSSWSNIVLAYEPVW---------------AIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATR-I 207 (251)
Q Consensus 144 ~~~Ql~~~l~~i~~~~~~iIAYEPvW---------------AIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~-i 207 (251)
+.++++..++.+. .+.+|.|+|.| .+.++..+||.+++++.+.||+ .+++ |
T Consensus 177 Ld~~~~~~l~~~~--~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~I 243 (312)
T 2o1e_A 177 LDKLYRTTAKKAE--KKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKE-----------HNVKVI 243 (312)
T ss_dssp HHHHHHHHHHSCS--CCEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTS-----------SCCCEE
T ss_pred HHHHHHHHhhccC--CCEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHH-----------cCCCEE
Confidence 4444555555442 34566666654 4667899999999999998884 3465 5
Q ss_pred EEccCCCcccHHHHhcCCCCCEE
Q 025540 208 IYGGSVNGANCKELAAQPDVDGF 230 (251)
Q Consensus 208 lYGGSV~~~n~~~l~~~~~vDG~ 230 (251)
+|-=.+++..+..++...++--+
T Consensus 244 f~e~~~~~~~~~~ia~e~g~~v~ 266 (312)
T 2o1e_A 244 YFEEIASSKVADTLASEIGAKTE 266 (312)
T ss_dssp ECSSCCCHHHHHHHHHHTCCEEE
T ss_pred EEeCCCChHHHHHHHHHhCCcEE
Confidence 55677788888888877776533
No 222
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=48.18 E-value=1.6e+02 Score=26.68 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.9
Q ss_pred eEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 206 RIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 206 ~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
||+--|+|. ++++...+. .+.|++.+|++-+.
T Consensus 201 PVIAdGGI~~~~di~kALa-~GAd~V~iGr~f~~ 233 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALA-FGADFVMIGGMLAG 233 (361)
T ss_dssp EEEEESCCCSHHHHHHHHH-TTCSEEEESGGGTT
T ss_pred CEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 899888885 777777766 68999999998664
No 223
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=47.57 E-value=29 Score=31.16 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=40.1
Q ss_pred CCccccc---cccHHHHHhCCCCEEEeC--------chhh-ccccc--cChHHHHHHHHHHHHCCCeEEE
Q 025540 71 KGGAFTG---EISAEMLVNLEIPWVILG--------HSER-RLILN--ELNEFVGDKVAYALSQGLKVIA 126 (251)
Q Consensus 71 ~~Ga~TG---eiS~~mLkd~G~~~viiG--------HSER-R~~f~--Etd~~i~~Kv~~al~~gl~pIl 126 (251)
..|+|+. .-+...|++.||++|-|= ||.- +--.+ ++++.+...++.|.+.||.+++
T Consensus 46 ~~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 46 QHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp BTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3455554 257788999999999883 3321 11111 3899999999999999999987
No 224
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=47.11 E-value=13 Score=33.64 Aligned_cols=149 Identities=16% Similarity=0.166 Sum_probs=83.1
Q ss_pred cccccHHHHHhCCCCEEEe---Cchhhcccc-ccChHHHHHHHHHHHHCCCeEEEEe---CC-----cHHHHhcCCcHHH
Q 025540 76 TGEISAEMLVNLEIPWVIL---GHSERRLIL-NELNEFVGDKVAYALSQGLKVIACV---GE-----TLEQREAGSTMDV 143 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~vii---GHSERR~~f-~Etd~~i~~Kv~~al~~gl~pIlCi---GE-----~~~~r~~g~~~~~ 143 (251)
.-..|++-++++|++.|=+ =|++--.-+ .+-.+.+.+=...|.+.||.-++=+ +. ...+. +....+.
T Consensus 111 l~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~-a~~~p~~ 189 (332)
T 3iv3_A 111 LVDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEF-AKVKVHK 189 (332)
T ss_dssp CTTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHH-HTTHHHH
T ss_pred ccccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhh-hccCHHH
Confidence 4456899999999997633 233211101 1223567777889999999877622 32 21121 1223444
Q ss_pred HHHHHHHHH-hccCCCCCeEEEEc-cc-----CccCCCCCC-CHHHHHHHHHHHHHHHHhcCCccccCcceEEE-ccCCC
Q 025540 144 VAAQTKAIA-DRVSSWSNIVLAYE-PV-----WAIGTGKVA-TPAQAQEVHFELRKWLLANTSPEIAAATRIIY-GGSVN 214 (251)
Q Consensus 144 ~~~Ql~~~l-~~i~~~~~~iIAYE-Pv-----WAIGtG~~a-~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilY-GGSV~ 214 (251)
+..=++..- .. +...++=-| |. ...|.|.++ |-++ .++..++... +..+|++| +|+++
T Consensus 190 V~~a~R~~~~~e---lGaDv~Kve~p~~~~~v~g~~~~~~~y~~~e---a~~~f~~~~~-------a~~~P~v~lsgG~~ 256 (332)
T 3iv3_A 190 VNDAMKVFSAER---FGIDVLKVEVPVNMVYVEGFAEGEVVYSKEE---AAQAFREQEA-------STDLPYIYLSAGVS 256 (332)
T ss_dssp HHHHHHHHTSGG---GCCSEEEECCSSCGGGBTTTCSSCCCBCHHH---HHHHHHHHHH-------TCSSCEEEECTTCC
T ss_pred HHHHHHHHhhcC---cCCcEEEEecCCChhhhcccccccccccHHH---HHHHHHHHHh-------cCCCCEEEECCCCC
Confidence 555555441 11 223333222 32 234455444 4443 4445555432 34689776 88887
Q ss_pred cccHHHHh---cCCCC--CEEEEcCccCc
Q 025540 215 GANCKELA---AQPDV--DGFLVGGASLK 238 (251)
Q Consensus 215 ~~n~~~l~---~~~~v--DG~LVG~asl~ 238 (251)
.+...+.+ ...+. .|+++|++.++
T Consensus 257 ~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq 285 (332)
T 3iv3_A 257 AELFQETLVFAHKAGAKFNGVLCGRATWA 285 (332)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcceEEeeHHHHH
Confidence 66554443 34566 99999999998
No 225
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=46.68 E-value=1.2e+02 Score=25.04 Aligned_cols=29 Identities=17% Similarity=-0.042 Sum_probs=16.2
Q ss_pred CceeEEEcCccccHHHHHhhcC-CCceEee
Q 025540 36 DVVEVVVSPPFVFLGLVKSSLR-PGFHVAA 64 (251)
Q Consensus 36 ~~~~v~i~Pp~~~L~~~~~~~~-~~i~vgA 64 (251)
+.+++....+...+..+.+.+. .++.+.+
T Consensus 53 ~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 53 VGFEPGGGGLAGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp CEEECBSTTCGGGHHHHHHHHTTSSCEECE
T ss_pred CEEEecCCchHHHHHHHHHHHHHcCCeEEE
Confidence 4566555433455666666665 5566544
No 226
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=46.11 E-value=30 Score=28.74 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHH
Q 025540 107 NEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEV 185 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~ 185 (251)
-+.+.+-+..|.+.|...|++ .|..... ......+.+.+.|+.+++ ....+.|++||.+--++-...+++++.++
T Consensus 88 ~~~~~~~i~~A~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~~l~~l~~---~~~gv~l~lEn~~~~~~~~~~~~~~~~~l 163 (287)
T 2x7v_A 88 VELLKKEVEICRKLGIRYLNIHPGSHLGT-GEEEGIDRIVRGLNEVLN---NTEGVVILLENVSQKGGNIGYKLEQLKKI 163 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCEECTTS-CHHHHHHHHHHHHHHHHT---TCCSCEEEEECCCCCTTEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCC-CHHHHHHHHHHHHHHHHc---ccCCCEEEEeCCCCCCCccCCCHHHHHHH
Confidence 345667778888888876654 3432100 000112233334444433 22578899999863332222467776666
Q ss_pred HHHH
Q 025540 186 HFEL 189 (251)
Q Consensus 186 ~~~I 189 (251)
++.+
T Consensus 164 ~~~~ 167 (287)
T 2x7v_A 164 RDLV 167 (287)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5554
No 227
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=45.68 E-value=44 Score=28.33 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=45.4
Q ss_pred ChHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccC-CCCCeEEEEcccCccCCCCCCCHHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVS-SWSNIVLAYEPVWAIGTGKVATPAQAQ 183 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~-~~~~~iIAYEPvWAIGtG~~a~~e~i~ 183 (251)
+-+.+.+-+..|.+.|...|++ .|-.. +...+.-.+++...+..+. ....+.|++||..-.++-...+++++.
T Consensus 92 ~~~~~~~~i~~A~~lGa~~vv~h~g~~~-----~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~ 166 (303)
T 3aal_A 92 GVDFLRAEIERTEAIGAKQLVLHPGAHV-----GAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELA 166 (303)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCEECT-----TSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcCC-----CCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHH
Confidence 3455667788888999887765 34221 1122223333333343332 125789999998633432334788877
Q ss_pred HHHHHHH
Q 025540 184 EVHFELR 190 (251)
Q Consensus 184 ~~~~~IR 190 (251)
++++.+.
T Consensus 167 ~li~~v~ 173 (303)
T 3aal_A 167 YIIDGVA 173 (303)
T ss_dssp HHHHHCT
T ss_pred HHHHhcC
Confidence 6666553
No 228
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=45.04 E-value=1.2e+02 Score=27.47 Aligned_cols=49 Identities=6% Similarity=-0.033 Sum_probs=32.7
Q ss_pred HHHHHhCCCCEEEeCchhhc---------------cccccC-hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 81 AEMLVNLEIPWVILGHSERR---------------LILNEL-NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR---------------~~f~Et-d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
.+++|++|++.|=+.+++.. -.++|+ -+.+.+-+..|.++||.+|+++-
T Consensus 68 l~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 68 LDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 56889999999988632210 112221 23344678889999999999865
No 229
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=44.92 E-value=19 Score=29.91 Aligned_cols=79 Identities=11% Similarity=0.070 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCc-HHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEccc-----CccCCCCCCCHH
Q 025540 108 EFVGDKVAYALSQGLKVIAC-VGET-LEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPV-----WAIGTGKVATPA 180 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC-iGE~-~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPv-----WAIGtG~~a~~e 180 (251)
+.+.+-+..|.+.|...|++ ++.. ...++ ...+.+.+.|+.+.+.. ....+.++|||. |-..+....+++
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~--~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3u0h_A 84 SLLPDRARLCARLGARSVTAFLWPSMDEEPV--RYISQLARRIRQVAVEL-LPLGMRVGLEYVGPHHLRHRRYPFVQSLA 160 (281)
T ss_dssp HTHHHHHHHHHHTTCCEEEEECCSEESSCHH--HHHHHHHHHHHHHHHHH-GGGTCEEEEECCCCGGGCCSSEECCCSHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeecCCCCCcch--hhHHHHHHHHHHHHHHH-HHcCCEEEEEeccccccccccccccCCHH
Confidence 44557788888888887663 2211 00000 12223334444433211 134588999986 222222345677
Q ss_pred HHHHHHHHH
Q 025540 181 QAQEVHFEL 189 (251)
Q Consensus 181 ~i~~~~~~I 189 (251)
++.++++.+
T Consensus 161 ~~~~l~~~v 169 (281)
T 3u0h_A 161 DLKTFWEAI 169 (281)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 766555443
No 230
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=43.94 E-value=18 Score=30.19 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=37.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 171 IGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 171 IGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
=|||++.+-+.+++. . . ...|++-.|+++|+|..+.+ ..+.+|+=|.+..
T Consensus 128 gGtG~~fdW~~l~~~------~-~--------~~~p~~LAGGL~peNV~~ai-~~~p~gVDvsSGv 177 (203)
T 1v5x_A 128 PGSGEAYPRAWAKPL------L-A--------TGRRVILAGGIAPENLEEVL-ALRPYALDLASGV 177 (203)
T ss_dssp TTSCCCCCGGGGHHH------H-H--------TTSCEEECSSCCSTTHHHHH-HHCCSEEEESGGG
T ss_pred CCCCCccCHHHHHhh------h-c--------cCCcEEEECCCCHHHHHHHH-hcCCCEEEeCCce
Confidence 489999887665431 1 1 13689999999999998877 6688898877653
No 231
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=43.55 E-value=13 Score=32.99 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHHHHhcC-CccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 178 TPAQAQEVHFELRKWLLANT-SPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 178 ~~e~i~~~~~~IR~~l~~~~-~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++++++++.++.. . | -++++|.-=|+|+++|+.+++. .++|++-||++-.+
T Consensus 229 ~~~~l~~~v~~l~~~----~~g---~~~v~I~ASGGIt~~ni~~~~~-~GvD~i~vGs~i~~ 282 (294)
T 3c2e_A 229 KGDGLKMCAQSLKNK----WNG---KKHFLLECSGGLNLDNLEEYLC-DDIDIYSTSSIHQG 282 (294)
T ss_dssp ---------------------------CCEEEEECCCCC------CC-CSCSEEECGGGTSS
T ss_pred CHHHHHHHHHHhccc----ccC---CCCeEEEEECCCCHHHHHHHHH-cCCCEEEEechhcC
Confidence 577777776555421 0 0 1348899999999999998764 78999999987543
No 232
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.53 E-value=12 Score=36.27 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=34.7
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-.|++ +++++.+++....+|++.+|++.+. |+|.
T Consensus 280 ~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~ 320 (671)
T 1ps9_A 280 SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELL 320 (671)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHH
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHH
Confidence 5899999999 7899999999888999999999986 7654
No 233
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=43.23 E-value=45 Score=29.11 Aligned_cols=69 Identities=13% Similarity=-0.014 Sum_probs=46.7
Q ss_pred eEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-h
Q 025540 161 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P 239 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~ 239 (251)
+-+.=||.|-=| ++++++ .||+. -++|||..+-+.+.--..-+...+.|++|++-+.|+ +
T Consensus 96 IsVltd~~~f~G-----s~~~L~----~ir~~----------v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~ 156 (272)
T 3tsm_A 96 LSVLTDTPSFQG-----APEFLT----AARQA----------CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDD 156 (272)
T ss_dssp EEEECCSTTTCC-----CHHHHH----HHHHT----------SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHH
T ss_pred EEEeccccccCC-----CHHHHH----HHHHh----------cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHH
Confidence 445557766543 466664 34432 258999998876665556677889999999999998 5
Q ss_pred HHHHHHHHH
Q 025540 240 EFIDIIKSA 248 (251)
Q Consensus 240 ~F~~Ii~~~ 248 (251)
...++++.+
T Consensus 157 ~l~~l~~~a 165 (272)
T 3tsm_A 157 LAKELEDTA 165 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 234
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=43.14 E-value=33 Score=30.43 Aligned_cols=49 Identities=6% Similarity=-0.072 Sum_probs=34.2
Q ss_pred ccHHHHHhCCCCEEEeC-chhhccccccChHHHHHHHHHHHHCCCeEEEEe
Q 025540 79 ISAEMLVNLEIPWVILG-HSERRLILNELNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 79 iS~~mLkd~G~~~viiG-HSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCi 128 (251)
-....||++|+++|=+. +-+.+.- .-+.+.+.+.+++|.++||++++.+
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~~g-~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPSDG-SYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCTTC-TTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHcCCCEEEEEEEECCCCC-ccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35788999999999881 1000000 1224667778999999999999985
No 235
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=43.03 E-value=27 Score=27.06 Aligned_cols=29 Identities=28% Similarity=0.323 Sum_probs=24.3
Q ss_pred ccCccCCCCCCCHHHHHHHHHHHHHHHHh
Q 025540 167 PVWAIGTGKVATPAQAQEVHFELRKWLLA 195 (251)
Q Consensus 167 PvWAIGtG~~a~~e~i~~~~~~IR~~l~~ 195 (251)
|+|.-+.....++++.+++.+.||+.|.+
T Consensus 107 ~vw~~~~~~~~~~eel~~~~~~ir~~L~~ 135 (137)
T 3ohe_A 107 PVWGKQPPVPYTEEQQASVKAKLQPLLEQ 135 (137)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 77866666778899999999999998864
No 236
>2ww5_A LYTC autolysin, 1,4-beta-N-acetylmuramidase; hydrolase, glycosidase, choline-binding protein; 1.61A {Streptococcus pneumoniae} PDB: 2wwd_A* 2wwc_A
Probab=42.73 E-value=1.7e+02 Score=27.07 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=38.1
Q ss_pred cccccc-cHHHH-HhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeE
Q 025540 74 AFTGEI-SAEML-VNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124 (251)
Q Consensus 74 a~TGei-S~~mL-kd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~p 124 (251)
.|.|.| ....| ++.|+++|+|==+|. .+ .|.....-++.|.++||..
T Consensus 276 ~~Qg~i~dw~~v~k~~Gi~FviiKateG-~~---~D~~f~~n~~~A~~aGl~v 324 (468)
T 2ww5_A 276 EHNGRINDWKKVIDENEVDGVIVRLGYS-GK---EDKELAHNIKELNRLGIPY 324 (468)
T ss_dssp GGGCCCSCHHHHHHHHTCCEEEEEEEET-TE---ECTTHHHHHHHHHHHTCCE
T ss_pred ccCCcHHHHHHHHHhCCCcEEEEEEecC-Cc---cCHHHHHHHHHHHHcCCce
Confidence 467888 78888 589999999988887 43 4666778899999999974
No 237
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=42.46 E-value=1.6e+02 Score=25.26 Aligned_cols=76 Identities=11% Similarity=0.157 Sum_probs=43.0
Q ss_pred ceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccc----ccHHHHHhCCCCEEEeCchhhccccccCh-HHHH
Q 025540 37 VVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGE----ISAEMLVNLEIPWVILGHSERRLILNELN-EFVG 111 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGe----iS~~mLkd~G~~~viiGHSERR~~f~Etd-~~i~ 111 (251)
+++=+||+| ..+..+++.....+.+-.--+-+ .|+-.|+ .++....+.|+++.++| |-.|+-.| ....
T Consensus 157 G~dGvV~s~-~e~~~ir~~~~~~f~~vtPGIr~--~g~~~gDQ~Rv~T~~~a~~aGad~iVvG----r~I~~a~dp~~a~ 229 (259)
T 3tfx_A 157 GADGVICSP-LEVKKLHENIGDDFLYVTPGIRP--AGNAKDDQSRVATPKMAKEWGSSAIVVG----RPITLASDPKAAY 229 (259)
T ss_dssp TCCEEECCG-GGHHHHHHHHCSSSEEEECCCCC--C-----------CHHHHHHTTCSEEEEC----HHHHTSSSHHHHH
T ss_pred CCCEEEECH-HHHHHHHhhcCCccEEEcCCcCC--CCCCcCCccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHHH
Confidence 466678887 44566666665444432222222 4445566 67888999999999999 56776544 3344
Q ss_pred HHHHHHHH
Q 025540 112 DKVAYALS 119 (251)
Q Consensus 112 ~Kv~~al~ 119 (251)
++++..++
T Consensus 230 ~~i~~~~~ 237 (259)
T 3tfx_A 230 EAIKKEFN 237 (259)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 45554443
No 238
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=41.76 E-value=91 Score=25.63 Aligned_cols=76 Identities=14% Similarity=0.005 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHH
Q 025540 106 LNEFVGDKVAYALSQGLKVIAC-VGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQE 184 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlC-iGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~ 184 (251)
+-+.+.+-+..|.+.|...|++ .|-. +. +.+.+.++.+++.......+.|++||.+--|+-..-+++++.+
T Consensus 86 ~~~~~~~~i~~a~~lGa~~vv~h~g~~------~~--~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~ 157 (270)
T 3aam_A 86 SVASLADDLEKAALLGVEYVVVHPGSG------RP--ERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAW 157 (270)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCBS------CH--HHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCC------CH--HHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHH
Confidence 4455667788888888876654 4543 11 3444455554443210246889999986444433347888776
Q ss_pred HHHHH
Q 025540 185 VHFEL 189 (251)
Q Consensus 185 ~~~~I 189 (251)
+++.+
T Consensus 158 l~~~v 162 (270)
T 3aam_A 158 LVADT 162 (270)
T ss_dssp HHTTS
T ss_pred HHHhC
Confidence 65543
No 239
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=41.55 E-value=30 Score=30.54 Aligned_cols=55 Identities=9% Similarity=0.047 Sum_probs=39.8
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEc-cCCCcccHHHHh---cCCCCCEEEEcCc
Q 025540 173 TGKV--ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYG-GSVNGANCKELA---AQPDVDGFLVGGA 235 (251)
Q Consensus 173 tG~~--a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYG-GSV~~~n~~~l~---~~~~vDG~LVG~a 235 (251)
||.. .|.++=.++.+...+.. +..+||+-| |+-+...+.+++ ...++||+|+--=
T Consensus 52 TGE~~~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 52 FSEQFAITDDERDVLTRTILEHV--------AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp GGTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred ccCcccCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3444 47777777777776653 346999999 777888887754 4678999999753
No 240
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=41.31 E-value=1.5e+02 Score=27.80 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccC
Q 025540 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 178 ~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl 237 (251)
+..-+.++.+..++.+.+ + +..+||+--|++...-....+-..+.|++.+|+.-+
T Consensus 331 ~~~~l~~v~~~~~~~~~~-~----~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~ 385 (503)
T 1me8_A 331 QATAVIDVVAERNKYFEE-T----GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFA 385 (503)
T ss_dssp HHHHHHHHHHHHHHHHHH-H----SEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred hHHHHHHHHHHHHHHhhh-c----CCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 445555666665554332 1 236899998888776666666667999999998643
No 241
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=41.27 E-value=1.5e+02 Score=24.31 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=69.7
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEE----EEeCCcHHHHhcCCcHHHHHHHHH
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI----ACVGETLEQREAGSTMDVVAAQTK 149 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI----lCiGE~~~~r~~g~~~~~~~~Ql~ 149 (251)
.|.|.|....|+..|+++|+|==+|-..+ .|.....-++.|.++||..= .|.+.+. -..|.+
T Consensus 12 ~~qg~idw~~v~~~gi~FviiKateG~~~---~D~~f~~n~~~A~~aGl~vG~Yhf~~~~~~~-----------a~~qA~ 77 (217)
T 1jfx_A 12 HWQGSINWSSVKSAGMSFAYIKATEGTNY---KDDRFSANYTNAYNAGIIRGAYHFARPNASS-----------GTAQAD 77 (217)
T ss_dssp GGGCSCCHHHHHHTTCCEEEEEEEETTTE---ECTTHHHHHHHHHHTTCEEEEEEECCTTTSC-----------HHHHHH
T ss_pred CCCCCCCHHHHHhCCCCEEEEEEecCCCc---cChHHHHHHHHHHHCCCeEEEEEEeeCCCCC-----------HHHHHH
Confidence 36789999999999999999966654433 35556788999999999631 2332211 135666
Q ss_pred HHHhccC---C---CCCeEEEEccc-CccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEcc
Q 025540 150 AIADRVS---S---WSNIVLAYEPV-WAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211 (251)
Q Consensus 150 ~~l~~i~---~---~~~~iIAYEPv-WAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGG 211 (251)
-.+..+. . .-++++-+|.. |.- +-...++++..+.+...-+.+.+.+| .-++||-.
T Consensus 78 ~f~~~~~~~~~~~~~lp~~lD~E~~~~~~-~~~~~~~~~~~~~~~~f~~~v~~~~G-----~~~~iYt~ 140 (217)
T 1jfx_A 78 YFASNGGGWSRDNRTLPGVLDIEHNPSGA-MCYGLSTTQMRTWINDFHARYKARTT-----RDVVIYTT 140 (217)
T ss_dssp HHHHTTCCCCCSSSBCCCEEECCSCSSSC-TTTTCCHHHHHHHHHHHHHHHHHHHS-----SCCEEEEC
T ss_pred HHHHHhhccCCCCCCcCeEEEeecCCCCc-ccCCCCHHHHHHHHHHHHHHHHHHHC-----CCeEEEec
Confidence 7777662 1 12467888853 211 11124555544333332333333322 34789975
No 242
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=41.27 E-value=29 Score=26.76 Aligned_cols=44 Identities=7% Similarity=-0.001 Sum_probs=33.2
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcH
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETL 132 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~ 132 (251)
.|...+..|++.||+.||.|.--. +....|+.|++++.+.+.+.
T Consensus 67 ~g~~~~~~L~~~gv~~VI~g~iG~-------------~a~~~L~~GI~v~~~~~~~v 110 (136)
T 2re2_A 67 RGVFMLKSALDHGANALVLSEIGS-------------PGFNFIKNKMDVYIVPEMPV 110 (136)
T ss_dssp HHHHHHHHHHHTTCSEEEESCCBH-------------HHHHHHTTTSEEEECCSCBH
T ss_pred ccHHHHHHHHHcCCCEEEECCCCH-------------hHHHHHHCCCEEEEcCCCCH
Confidence 356789999999999999997533 34455555999999866554
No 243
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=41.06 E-value=28 Score=33.10 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcC-CCCCEEEEcC
Q 025540 185 VHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQ-PDVDGFLVGG 234 (251)
Q Consensus 185 ~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~-~~vDG~LVG~ 234 (251)
+.+.+|+.+.+. | .+.++|+++|+++++|+.++... .++|.+-||.
T Consensus 271 l~~~~r~~ld~~-G---~~~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT 317 (494)
T 2f7f_A 271 ISKRVREQLDEA-G---FTEAKIYASNDLDENTILNLKMQKSKIDVWGVGT 317 (494)
T ss_dssp HHHHHHHHHHHT-T---CTTCEEEECSSCCHHHHHHHHHTTCCCCEEEECH
T ss_pred HHHHHHHHHHhC-C---CCceEEEEECCCCHHHHHHHHHcCCCEEEEecCc
Confidence 334455555432 2 13589999999999999999874 2378888886
No 244
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.99 E-value=1.6e+02 Score=25.33 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=37.5
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHH---hcCCCCCEEEEcCccC
Q 025540 173 TGKV--ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKEL---AAQPDVDGFLVGGASL 237 (251)
Q Consensus 173 tG~~--a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l---~~~~~vDG~LVG~asl 237 (251)
||.. .|.++=.++.+..++.. +..+||+-|=+- +...+.++ +...++||+|+--=..
T Consensus 45 tGE~~~Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 45 TGESATLNHDEHADVVMMTLDLA--------DGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp TTTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred ccchhhCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4554 46777777777776653 345888888554 55666655 4567899999976443
No 245
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=40.91 E-value=38 Score=28.13 Aligned_cols=80 Identities=15% Similarity=0.009 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-----CCcHHHHhcCCcHHHHHHHHHHHHhccC---CCCCeEEEEcccCccCCCCCCCH
Q 025540 108 EFVGDKVAYALSQGLKVIACV-----GETLEQREAGSTMDVVAAQTKAIADRVS---SWSNIVLAYEPVWAIGTGKVATP 179 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlCi-----GE~~~~r~~g~~~~~~~~Ql~~~l~~i~---~~~~~iIAYEPvWAIGtG~~a~~ 179 (251)
+.+.+-+..|.+.|...|++. |.+. ...+...+.-.+++...+..+. ....+.|++||..--.+....++
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~ 165 (290)
T 2qul_A 88 EYVKRLLDDCHLLGAPVFAGLTFCAWPQSP--PLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDA 165 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEEEESSCCC--CTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSH
T ss_pred HHHHHHHHHHHHcCCCEEEeeccccCCccc--CCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCH
Confidence 456677777888888776642 4310 0001111111222222233221 12357899999743233344577
Q ss_pred HHHHHHHHHH
Q 025540 180 AQAQEVHFEL 189 (251)
Q Consensus 180 e~i~~~~~~I 189 (251)
+++.++++.+
T Consensus 166 ~~~~~l~~~~ 175 (290)
T 2qul_A 166 KEAIAFADAV 175 (290)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 7766555443
No 246
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=40.45 E-value=1.3e+02 Score=24.51 Aligned_cols=119 Identities=14% Similarity=0.022 Sum_probs=69.8
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeE-E---EEeCCcHHHHhcCCcHHHHHHHHH
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV-I---ACVGETLEQREAGSTMDVVAAQTK 149 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~p-I---lCiGE~~~~r~~g~~~~~~~~Ql~ 149 (251)
.|.|+|....|+..|+++|+|==+|-..+ .|.....-++.|.++||.. . .|.+.+ + -.+|.+
T Consensus 11 ~~qg~idw~~v~~~gi~FviiKateG~~~---~D~~f~~n~~~A~~aGl~vG~Yhf~~~~~~-~----------a~~qA~ 76 (210)
T 2x8r_A 11 NHQKSVNFEAAKKDGAQFVMIKATEGTTY---KDTVFNSHYTGATKAGLLRGGYHFARPDKS-T----------GSTQAK 76 (210)
T ss_dssp TTCSCCCHHHHHHTTEEEEEEEEEETTTE---ECTTHHHHHHHHHHTTCEEEEEEECCTTSS-C----------HHHHHH
T ss_pred CCCCCCCHHHHHhCCCcEEEEEEecCCCc---cChHHHHHHHHHHHCCCeeEEEEEeecCCC-c----------HHHHHH
Confidence 37789999999999999999966665433 3556678899999999964 1 233322 1 234666
Q ss_pred HHHhccCC------CCCeEEEEccc-CccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC
Q 025540 150 AIADRVSS------WSNIVLAYEPV-WAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 212 (251)
Q Consensus 150 ~~l~~i~~------~~~~iIAYEPv-WAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS 212 (251)
-.++.+.. .-++++-+|.. |. .+....+++++.+.+...-+.+.+.+| .-++||-+.
T Consensus 77 ~f~~~~~~~~~~~~~lp~~lD~E~~~~~-~~~~~~~~~~~~~~~~~f~~~v~~~~G-----~~p~iYt~~ 140 (210)
T 2x8r_A 77 FFLKNGGGWSDDNRTLPGMLDIEYNPYG-ATCYGLSHSQMVAWIHDFVNEYHHATS-----RWPMIYTTA 140 (210)
T ss_dssp HHHTTTCCCCSSSSBCCCEEECCCCTTS-CGGGGCCHHHHHHHHHHHHHHHHHHHS-----SCCEEEECH
T ss_pred HHHHHhcccCCCCCccceEEeeeccCCc-ccccCCCHHHHHHHHHHHHHHHHHHHC-----CccEEEcCH
Confidence 66766531 12457888852 11 111123555543333333333433322 357999753
No 247
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=40.42 E-value=1.8e+02 Score=25.18 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=33.0
Q ss_pred cHHHHHhCCCCEEEeCc-hh--------hccccccC-hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 80 SAEMLVNLEIPWVILGH-SE--------RRLILNEL-NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 80 S~~mLkd~G~~~viiGH-SE--------RR~~f~Et-d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
-.+++|++|++.|=+.| ++ ....|+|. -+.+.+-+..|.++||.+|+++-
T Consensus 47 dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~ 106 (373)
T 1rh9_A 47 TFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLV 106 (373)
T ss_dssp HHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 35788999999998764 22 01112221 23445667789999999999763
No 248
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=40.37 E-value=1.5e+02 Score=26.26 Aligned_cols=56 Identities=18% Similarity=0.121 Sum_probs=37.8
Q ss_pred ccccccHHHHHhCCCCEEEeCchhhccc-------cccC-hHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 75 FTGEISAEMLVNLEIPWVILGHSERRLI-------LNEL-NEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 75 ~TGeiS~~mLkd~G~~~viiGHSERR~~-------f~Et-d~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
++-+-....|++.|++.|=+.=+-.|.+ +++. -+.+.+-|..|.++||.+||.+--
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 3444456788999999996643322221 1111 345778889999999999999753
No 249
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=39.96 E-value=1.1e+02 Score=27.02 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC-CCcccHHHH---hcCCCCCEEEEcCc
Q 025540 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS-VNGANCKEL---AAQPDVDGFLVGGA 235 (251)
Q Consensus 178 ~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS-V~~~n~~~l---~~~~~vDG~LVG~a 235 (251)
|.++=.++.+...+.. +..+||+-|=+ -+...+.++ +...++||+|+--=
T Consensus 73 s~~Er~~v~~~~v~~~--------~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 73 THEEHKRIIELCVEQV--------AKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp CHHHHHHHHHHHHHHH--------TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHHh--------CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5665555666555543 23467777743 455555443 34567888888763
No 250
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=39.90 E-value=1e+02 Score=26.89 Aligned_cols=107 Identities=16% Similarity=0.077 Sum_probs=62.8
Q ss_pred ccccc---HHHHHhCCCCEEEeCc----hhhcccc--ccChHHHHHHHHHHHHCCCeE----EEEeCCcHHHHhcCCcHH
Q 025540 76 TGEIS---AEMLVNLEIPWVILGH----SERRLIL--NELNEFVGDKVAYALSQGLKV----IACVGETLEQREAGSTMD 142 (251)
Q Consensus 76 TGeiS---~~mLkd~G~~~viiGH----SERR~~f--~Etd~~i~~Kv~~al~~gl~p----IlCiGE~~~~r~~g~~~~ 142 (251)
.|.++ .+.|++.|++.+.+|. .|-|+.+ +-+-+.+-+-++.+.+.|+.+ |+-+|||.+++.
T Consensus 147 ~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~------ 220 (350)
T 3t7v_A 147 PGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTI------ 220 (350)
T ss_dssp CSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHH------
T ss_pred CCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHH------
Confidence 35555 5678999999988774 2323222 245667777889999999862 122367776652
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEcccCccCCC----CCCCHHHHHHHHHHHHHHHH
Q 025540 143 VVAAQTKAIADRVSSWSNIVLAYEPVWAIGTG----KVATPAQAQEVHFELRKWLL 194 (251)
Q Consensus 143 ~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG----~~a~~e~i~~~~~~IR~~l~ 194 (251)
+-+. .+..+....--+..|-|. =||. .++++++..++++..|-.+.
T Consensus 221 ---~~l~-~l~~l~~~~v~~~~f~p~--~gT~l~~~~~~~~~e~l~~ia~~Rl~lp 270 (350)
T 3t7v_A 221 ---LSLR-GMSTNDPDMVRVMTFLPQ--EGTPLEGFRDKSNLSELKIISVLRLMFP 270 (350)
T ss_dssp ---HHHH-HHHHTCCSEEEEEECCCC--TTSTTTTCCCCCCCCHHHHHHHHHHHST
T ss_pred ---HHHH-HHHhCCCCEEEecceeeC--CCCcCccCCCCChHHHHHHHHHHHHhCC
Confidence 2222 222222111123556663 2442 23578888889998887653
No 251
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=39.84 E-value=35 Score=25.09 Aligned_cols=44 Identities=23% Similarity=0.273 Sum_probs=32.7
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
.|...++.|++.||+.||.|+- ++.- .....++|++++.+...+
T Consensus 50 ~g~~~~~~l~~~gv~~vi~~~i------G~~a------~~~L~~~GI~v~~~~~~~ 93 (116)
T 1rdu_A 50 TGPKVVQSLVSKGVEYLIASNV------GRNA------FETLKAAGVKVYRFEGGT 93 (116)
T ss_dssp SSCSHHHHHHTTTCCEEECSSC------CSSC------HHHHHTTTCEEECCCSCB
T ss_pred ccHHHHHHHHHcCCCEEEECCC------CHhH------HHHHHHCCCEEEECCCCC
Confidence 3568899999999999999973 4433 344556899999865444
No 252
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=39.73 E-value=54 Score=38.15 Aligned_cols=68 Identities=22% Similarity=0.251 Sum_probs=41.7
Q ss_pred eEEEEcccCccCCCCCCC-HHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHH-Hh----------cCCCCC
Q 025540 161 IVLAYEPVWAIGTGKVAT-PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKE-LA----------AQPDVD 228 (251)
Q Consensus 161 ~iIAYEPvWAIGtG~~a~-~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~-l~----------~~~~vD 228 (251)
.+|..|-+-|-|..-..+ .+.+-++...||+ ..++||+-||++....... .+ -..+.|
T Consensus 572 y~vv~~G~eaGGH~g~~~~~~ll~~~~~~ir~----------~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAd 641 (3089)
T 3zen_D 572 VIVHIEGGRAGGHHSWEDLDDLLLATYSELRS----------RSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPID 641 (3089)
T ss_dssp EEEEECCSSSSEECCSCCHHHHHHHHHHHHTT----------CTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCS
T ss_pred EEEEEeCCCcCCCCCcccHHHHHHHHHHHHhh----------cCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCC
Confidence 367788777766433222 2222222233332 2469999999986654444 44 156799
Q ss_pred EEEEcCccCc
Q 025540 229 GFLVGGASLK 238 (251)
Q Consensus 229 G~LVG~asl~ 238 (251)
|+.||.+-+.
T Consensus 642 GV~vGTrfl~ 651 (3089)
T 3zen_D 642 GILVGTAAMA 651 (3089)
T ss_dssp EEECSSTTTT
T ss_pred EEEecHHHHh
Confidence 9999998774
No 253
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=38.47 E-value=27 Score=31.80 Aligned_cols=58 Identities=14% Similarity=0.020 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhcCCccccCcceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccC-c-h-HHHHHHHHH
Q 025540 182 AQEVHFELRKWLLANTSPEIAAATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASL-K-P-EFIDIIKSA 248 (251)
Q Consensus 182 i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl-~-~-~F~~Ii~~~ 248 (251)
.-+++..|++.+ ..++||+.-|+|.. +.+.+++. .+.|++.||++.+ + + -|.+|.+.+
T Consensus 284 a~~~v~~i~~~v--------~~~ipvI~~GGI~s~~da~~~l~-~GAd~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 284 STQTIREMYALT--------QGRVPIIGVGGVSSGQDALEKIR-AGASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HHHHHHHHHHHT--------TTCSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHc--------CCCceEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHhcCcHHHHHHHHHH
Confidence 345555555542 23689999888864 55555554 7999999999986 3 4 355665543
No 254
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=38.15 E-value=60 Score=27.68 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCC-cHHHH----hcCCcHHHHHHHHHHHHhccCCCCCeE-EEEcc--cCccCCCCCCC
Q 025540 108 EFVGDKVAYALSQGLKVIAC-VGE-TLEQR----EAGSTMDVVAAQTKAIADRVSSWSNIV-LAYEP--VWAIGTGKVAT 178 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC-iGE-~~~~r----~~g~~~~~~~~Ql~~~l~~i~~~~~~i-IAYEP--vWAIGtG~~a~ 178 (251)
+.+.+-+..|.+.|...|++ .|- +.... ......+.+.+.|+.+.+... ...+. |++|| .+ .....+
T Consensus 114 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~Gv~~l~lE~~~~~---~~~~~t 189 (316)
T 3qxb_A 114 QHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAK-RQGLSMLYVEPVPLA---TEFPSS 189 (316)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHH-HHTCCEEEECCCSCT---TBSSCS
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEEecCCc---cccCCC
Confidence 44567788888899988765 332 11100 000112233333433332111 22477 99999 43 223346
Q ss_pred HHHHHHHHHHH
Q 025540 179 PAQAQEVHFEL 189 (251)
Q Consensus 179 ~e~i~~~~~~I 189 (251)
++++.++++.+
T Consensus 190 ~~~~~~l~~~v 200 (316)
T 3qxb_A 190 AADAARLMADL 200 (316)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77776666555
No 255
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=37.98 E-value=69 Score=27.90 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=17.2
Q ss_pred CEEEeCchhhccccccChHHHHHHHHHHHHCCCeE
Q 025540 90 PWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124 (251)
Q Consensus 90 ~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~p 124 (251)
-.+|.||.+.+. | |..+.+.=++.+.+.|-.+
T Consensus 25 iLII~aHP~~~S-~--n~aL~~~~~~~l~~~G~eV 56 (280)
T 4gi5_A 25 VLLIYAHPEPRS-L--NGALKNFAIRHLQQAGHEV 56 (280)
T ss_dssp EEEEECCSCTTS-H--HHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEeCCCCcc-H--HHHHHHHHHHHHHHCCCeE
Confidence 358899997543 2 2233333344555666554
No 256
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=36.95 E-value=32 Score=33.59 Aligned_cols=49 Identities=18% Similarity=-0.075 Sum_probs=39.5
Q ss_pred cHHHHHhCCCCEEEe-----CchhhccccccC-hHHHHHHHHHHHHCCCeEEEEe
Q 025540 80 SAEMLVNLEIPWVIL-----GHSERRLILNEL-NEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 80 S~~mLkd~G~~~vii-----GHSERR~~f~Et-d~~i~~Kv~~al~~gl~pIlCi 128 (251)
...++|++|++.|-+ .|--++-.|+-+ +..+.+=++.|.++||.+|++.
T Consensus 37 ~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~Vilrp 91 (595)
T 4e8d_A 37 SLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRP 91 (595)
T ss_dssp HHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEec
Confidence 356899999999999 787776666543 4457788999999999999983
No 257
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=36.45 E-value=36 Score=26.88 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=26.1
Q ss_pred ccCccCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 025540 167 PVWAIGTGKVATPAQAQEVHFELRKWLLANT 197 (251)
Q Consensus 167 PvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~ 197 (251)
|+|.-+.....++++.+++.+.||+.|.+..
T Consensus 107 ~vw~~~~~~~~~~eel~~~a~kIr~~L~~~~ 137 (149)
T 3i24_A 107 PVWGNTTGVIRAQSSQTQLVDLLRDKLSNIS 137 (149)
T ss_dssp CSTTCSCCCBCCHHHHHHHHHHHHHHHTTST
T ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 8887767777899999999999999987644
No 258
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=36.32 E-value=1.7e+02 Score=25.58 Aligned_cols=58 Identities=12% Similarity=0.082 Sum_probs=39.0
Q ss_pred cccccccHHHHHhCCCCEEEeCchhhcc-------ccccC-hHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 74 AFTGEISAEMLVNLEIPWVILGHSERRL-------ILNEL-NEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 74 a~TGeiS~~mLkd~G~~~viiGHSERR~-------~f~Et-d~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
++|-+-....|++.|++.|=|-=+=.|. .+++. -+.+.+-|..|.++||.+||.+=-.
T Consensus 41 p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 41 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 4555556778899999998654332221 11221 2567788999999999999987543
No 259
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=35.74 E-value=16 Score=32.43 Aligned_cols=47 Identities=23% Similarity=0.298 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
.++++++++++.++ ..++|.-=|+++++|+.+++. .++|++-||+.-
T Consensus 237 ~~~e~l~~~v~~~~------------~~~~I~ASGGIt~~~i~~~a~-~GvD~isvGsli 283 (296)
T 1qap_A 237 FNTDQMREAVKRVN------------GQARLEVSGNVTAETLREFAE-TGVDFISVGALT 283 (296)
T ss_dssp CCHHHHHHHHHTTC------------TTCCEEECCCSCHHHHHHHHH-TTCSEEECSHHH
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEECCCCHHHHHHHHH-cCCCEEEEeHHH
Confidence 78888877665432 347899999999999999876 679999999743
No 260
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=35.24 E-value=38 Score=28.07 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=14.0
Q ss_pred CceeEEEc--CccccHHHHHhhcC-CCceEe
Q 025540 36 DVVEVVVS--PPFVFLGLVKSSLR-PGFHVA 63 (251)
Q Consensus 36 ~~~~v~i~--Pp~~~L~~~~~~~~-~~i~vg 63 (251)
+.+++... +|...+..+++.+. .++.+.
T Consensus 38 ~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (264)
T 1yx1_A 38 QRVELREELFAGPPDTEALTAAIQLQGLECV 68 (264)
T ss_dssp SEEEEEGGGCSSCCCHHHHHHHHHHTTCEEE
T ss_pred CEEEEEHHhcCCCHHHHHHHHHHHHcCCEEE
Confidence 45676522 22125666666555 555543
No 261
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=35.21 E-value=24 Score=29.97 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=30.1
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCc
Q 025540 171 IGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGA 235 (251)
Q Consensus 171 IGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~a 235 (251)
=|||++-+-+.+... . .+.|++-.|+.||+|..+.+...+-.|+=|-+.
T Consensus 156 GGtG~~fDW~~~~~~----~------------~~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSG 204 (228)
T 4aaj_A 156 AGSGKLHDLRVSSLV----A------------RKIPVIVAGGLNAENVEEVIKVVKPYGVDVSSG 204 (228)
T ss_dssp ------CCCHHHHHH----H------------HHSCEEEESSCCTTTHHHHHHHHCCSEEEESGG
T ss_pred CCCcCcCChHHHHHh----h------------hcCCeEEECCCCHHHHHHHHHHhCCCEEEeCCC
Confidence 489999876543321 1 136899999999999999887666677766543
No 262
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=35.06 E-value=2.6e+02 Score=25.35 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=36.2
Q ss_pred ccccccHHHHHhCCCCEEEeCchhhc-------cccccChHHHHHHHHHHHHCCCeEEEEe
Q 025540 75 FTGEISAEMLVNLEIPWVILGHSERR-------LILNELNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 75 ~TGeiS~~mLkd~G~~~viiGHSERR-------~~f~Etd~~i~~Kv~~al~~gl~pIlCi 128 (251)
|.-|-....||+.|++.|=|.=+=.+ .+....-+.+.+-|..|.++||.+||.+
T Consensus 73 ~ite~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 73 WITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HSCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCcHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEe
Confidence 44455677888888888765432111 1111124667788999999999999986
No 263
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=34.66 E-value=31 Score=30.39 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=31.4
Q ss_pred CcceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc--hH-HHHHHH
Q 025540 203 AATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK--PE-FIDIIK 246 (251)
Q Consensus 203 ~~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~--~~-F~~Ii~ 246 (251)
.++||+--|+|. ++.+.+.+. .+.|++.+|++.+- +. |.+|.+
T Consensus 288 ~~ipVi~~GGI~~~~da~~~l~-~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 288 GRLPIIGVGGIDSVIAAREKIA-AGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp TSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHH-CCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 358999999986 566666665 68999999999873 54 445543
No 264
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=34.05 E-value=21 Score=32.24 Aligned_cols=45 Identities=24% Similarity=0.235 Sum_probs=32.1
Q ss_pred CcceEEEccCCCcc-cHHHHhcCCCCCEEEEcCc-cCc-h-HHHHHHHHH
Q 025540 203 AATRIIYGGSVNGA-NCKELAAQPDVDGFLVGGA-SLK-P-EFIDIIKSA 248 (251)
Q Consensus 203 ~~i~ilYGGSV~~~-n~~~l~~~~~vDG~LVG~a-sl~-~-~F~~Ii~~~ 248 (251)
.++||+--|+|... .+.+++ ..+.|++.||++ .+. + -|.+|.+.+
T Consensus 274 ~~ipIIg~GGI~s~~da~~~l-~aGAd~V~igra~~~~gP~~~~~i~~~L 322 (345)
T 3oix_A 274 PSIQIIGTGGVXTGRDAFEHI-LCGASMVQIGTALHQEGPQIFKRITKEL 322 (345)
T ss_dssp TTSEEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred CCCcEEEECCCCChHHHHHHH-HhCCCEEEEChHHHhcChHHHHHHHHHH
Confidence 36899988888764 455555 478999999999 555 4 456666543
No 265
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=34.04 E-value=17 Score=31.12 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=6.6
Q ss_pred HhCCCCEEEeCch
Q 025540 85 VNLEIPWVILGHS 97 (251)
Q Consensus 85 kd~G~~~viiGHS 97 (251)
.+.||+..|-|+-
T Consensus 183 ~~~gaD~~iTGd~ 195 (247)
T 1nmo_A 183 ARFGVDAFITGEV 195 (247)
T ss_dssp HHHCCSEEEESCC
T ss_pred HHcCCCEEEEcCc
Confidence 3445555555543
No 266
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=33.91 E-value=1.9e+02 Score=23.88 Aligned_cols=82 Identities=7% Similarity=0.033 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHCCCeEEEEe-CCcHH-HHhcCC----cHHHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCCCCHH
Q 025540 107 NEFVGDKVAYALSQGLKVIACV-GETLE-QREAGS----TMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlCi-GE~~~-~r~~g~----~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e 180 (251)
-+.+.+-+..|.+.|...|.++ .-... ....+. ..+.+.+.|+.+.+.. ....+.|++||..--.+....+++
T Consensus 87 ~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lEn~~~~~~~~~~~~~ 165 (294)
T 3vni_A 87 KAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVA-EACGVDFCLEVLNRFENYLINTAQ 165 (294)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHH-HHTTCEEEEECCCTTTCSSCCSHH
T ss_pred HHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHH-HHcCCEEEEEecCcccCcccCCHH
Confidence 3455567777888888777642 11000 000011 1223333333333211 123578999997322233344677
Q ss_pred HHHHHHHHH
Q 025540 181 QAQEVHFEL 189 (251)
Q Consensus 181 ~i~~~~~~I 189 (251)
++.++++.+
T Consensus 166 ~~~~l~~~v 174 (294)
T 3vni_A 166 EGVDFVKQV 174 (294)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 766655544
No 267
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.69 E-value=2.4e+02 Score=24.48 Aligned_cols=57 Identities=30% Similarity=0.353 Sum_probs=37.1
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHh---cCCCCCEEEEcCccC
Q 025540 173 TGKV--ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELA---AQPDVDGFLVGGASL 237 (251)
Q Consensus 173 tG~~--a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~---~~~~vDG~LVG~asl 237 (251)
||.. .|.++=.++.+..++.. +..+||+-|=+- +...+.+++ ...++||+|+--=..
T Consensus 60 tGE~~~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 60 TGESPTTTAAEKLELLKAVREEV--------GDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHHHHH--------TTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred ccChhhCCHHHHHHHHHHHHHHh--------CCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4554 46777677777766653 345888888554 556665554 457899999976443
No 268
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=33.32 E-value=18 Score=35.57 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=34.4
Q ss_pred cceEEEccCC-CcccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV-~~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+-.|++ +++.+.+++....+|++.+|++.+. |+|.
T Consensus 291 ~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~ 331 (729)
T 1o94_A 291 KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLP 331 (729)
T ss_dssp SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHH
Confidence 5899999999 5899999999888999999999996 7654
No 269
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=33.13 E-value=1.5e+02 Score=26.02 Aligned_cols=56 Identities=14% Similarity=0.038 Sum_probs=35.7
Q ss_pred ccccccHHHH-HhCCCCEEEeCchhhcc--ccccC-hHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 75 FTGEISAEML-VNLEIPWVILGHSERRL--ILNEL-NEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 75 ~TGeiS~~mL-kd~G~~~viiGHSERR~--~f~Et-d~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
|+-+-....| ++.|++.|=+-|+-... .+++. -+.+.+-+..|.++||.+||-+=.
T Consensus 53 ~~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 53 IVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp GCSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3334455666 49999999776652100 11111 245667789999999999986543
No 270
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=33.08 E-value=62 Score=23.95 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=30.2
Q ss_pred ccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 79 ISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 79 iS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
-.++.|++.||+.||.|.- ++ .-.....++|++++.+...+
T Consensus 54 ~~~~~L~~~gv~~vi~~~i------G~------~a~~~L~~~GI~v~~~~~~~ 94 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGI------GR------RAIEYFNSLGISVVTGVYGR 94 (121)
T ss_dssp HHHHHHHHTTCCEEECSBC------CH------HHHHHHHHTTCEEECSBCSB
T ss_pred HHHHHHHHcCCCEEEECCC------CH------hHHHHHHHCCCEEEECCCCC
Confidence 6789999999999999963 43 23344557899999765444
No 271
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=32.11 E-value=49 Score=27.59 Aligned_cols=23 Identities=13% Similarity=0.078 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHHCCCeEEEEe
Q 025540 106 LNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlCi 128 (251)
.-+.+.+-+..|.+.|...|++.
T Consensus 88 ~~~~~~~~i~~a~~lG~~~v~~~ 110 (301)
T 3cny_A 88 ASEAFEKHCQYLKAINAPVAVVS 110 (301)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEec
Confidence 34556677788888888776654
No 272
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=31.61 E-value=78 Score=29.09 Aligned_cols=50 Identities=14% Similarity=-0.021 Sum_probs=35.0
Q ss_pred ccHHHHHhCCCCEEEeC-chhhcc----ccc---cChHHHHHHHHHHHHCCCeEEEEe
Q 025540 79 ISAEMLVNLEIPWVILG-HSERRL----ILN---ELNEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 79 iS~~mLkd~G~~~viiG-HSERR~----~f~---Etd~~i~~Kv~~al~~gl~pIlCi 128 (251)
-....|++.|+++|=|- +-+... .++ -+.+.+.+.+++|.++||++++-+
T Consensus 52 d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldf 109 (399)
T 1ur4_A 52 DIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF 109 (399)
T ss_dssp CHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 36788999999999762 111110 011 245677788999999999999975
No 273
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=31.06 E-value=29 Score=32.32 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=33.2
Q ss_pred CcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc--h-HHHHHHHHH
Q 025540 203 AATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK--P-EFIDIIKSA 248 (251)
Q Consensus 203 ~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~--~-~F~~Ii~~~ 248 (251)
.++||+.-|+|.......-+-..+.|++.||++.+- + -|.+|.+.+
T Consensus 344 ~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L 392 (415)
T 3i65_A 344 KQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKREL 392 (415)
T ss_dssp TCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHH
Confidence 368999999988755544444489999999999874 4 356666543
No 274
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=30.98 E-value=60 Score=27.81 Aligned_cols=61 Identities=13% Similarity=0.106 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCCCeEEEEcccC
Q 025540 106 LNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVW 169 (251)
Q Consensus 106 td~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~~~iIAYEPvW 169 (251)
..+.+.+-+..|.+.|...|+|-|-... ......+.+.+.|+.+.+.. ....+.|+|||..
T Consensus 112 ~~~~~~~~i~~A~~lG~~~v~~~~~~~~--~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lEn~~ 172 (305)
T 3obe_A 112 FDEFWKKATDIHAELGVSCMVQPSLPRI--ENEDDAKVVSEIFNRAGEIT-KKAGILWGYHNHS 172 (305)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCC--SSHHHHHHHHHHHHHHHHHH-HTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCCCCCC--CCHHHHHHHHHHHHHHHHHH-HHcCCEEEEecCc
Confidence 3456778899999999999998653210 00001122333333333211 1346899999975
No 275
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=30.81 E-value=2e+02 Score=24.77 Aligned_cols=52 Identities=21% Similarity=0.164 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHh---cCCCCCEEEEcCcc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELA---AQPDVDGFLVGGAS 236 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~---~~~~vDG~LVG~as 236 (251)
.|.++=.++.+..++.. +..+||+.|-+- +...+.+++ ...++||+|+--=+
T Consensus 51 Ls~~Er~~v~~~~~~~~--------~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (291)
T 3a5f_A 51 MTETERKETIKFVIDKV--------NKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPY 106 (291)
T ss_dssp SCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHh--------CCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 35555555555555442 234666666443 334444333 34567777776533
No 276
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=30.50 E-value=28 Score=28.65 Aligned_cols=20 Identities=15% Similarity=0.032 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHCCCeEEEE
Q 025540 108 EFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC 127 (251)
+.+.+-+..|.+.|...|++
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~ 102 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVL 102 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEE
Confidence 34556666666677665544
No 277
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=30.46 E-value=2.5e+02 Score=23.75 Aligned_cols=49 Identities=16% Similarity=0.068 Sum_probs=32.3
Q ss_pred HHHH-HhCCCCEEEeCchhhccc--cccC--hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 81 AEML-VNLEIPWVILGHSERRLI--LNEL--NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 81 ~~mL-kd~G~~~viiGHSERR~~--f~Et--d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
...| ++.|++.|=+.|+-...- .++. -+.+.+-+..|.++||.+|+.+-
T Consensus 48 ~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 48 LDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 4545 579999998877532110 1111 14556678999999999999874
No 278
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=30.17 E-value=50 Score=26.04 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=24.2
Q ss_pred cccCccCCCCCCCHHHHHHHHHHHHHHHH
Q 025540 166 EPVWAIGTGKVATPAQAQEVHFELRKWLL 194 (251)
Q Consensus 166 EPvWAIGtG~~a~~e~i~~~~~~IR~~l~ 194 (251)
.|+|.-+.....++++.+++.+.||+.+.
T Consensus 111 ~pvw~~~~~~~~~~eel~~~a~~Ir~~L~ 139 (149)
T 3i4s_A 111 RPVWGVMQPLAHDATEVQNFISALRRKIW 139 (149)
T ss_dssp SCCTTTSCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ccccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 57887766677899999999999998874
No 279
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=30.03 E-value=95 Score=27.53 Aligned_cols=29 Identities=28% Similarity=0.185 Sum_probs=24.0
Q ss_pred ccccccHHHHHhCCCCEEEeCchhhcccc
Q 025540 75 FTGEISAEMLVNLEIPWVILGHSERRLIL 103 (251)
Q Consensus 75 ~TGeiS~~mLkd~G~~~viiGHSERR~~f 103 (251)
-|...|.+.|+++|++.|+.|.+==|..+
T Consensus 223 ~tp~~~~~eL~~lGv~~v~~~~~~~raa~ 251 (305)
T 3ih1_A 223 KTPYYSAEEFANMGFQMVIYPVTSLRVAA 251 (305)
T ss_dssp SSCCCCHHHHHHTTCSEEEECSHHHHHHH
T ss_pred CCCCCCHHHHHHcCCCEEEEchHHHHHHH
Confidence 35668999999999999999988766543
No 280
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.78 E-value=65 Score=25.62 Aligned_cols=62 Identities=24% Similarity=0.236 Sum_probs=42.7
Q ss_pred ccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHH
Q 025540 77 GEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAA 146 (251)
Q Consensus 77 GeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~ 146 (251)
|..-+++|++.|++.+ ++....++ +.|.+.++.+++.+-..|++.|-+--. ..+-|.+.+.+
T Consensus 29 ~~~l~~~l~~~G~~v~------~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g-~~D~t~eal~~ 90 (164)
T 3pzy_A 29 GPIITEWLAQQGFSSA------QPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA-PTDSTPDQTVA 90 (164)
T ss_dssp HHHHHHHHHHTTCEEC------CCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS-TTCCHHHHHHT
T ss_pred HHHHHHHHHHCCCEEE------EEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC-CCccHHHHHHH
Confidence 3445788999987654 34455667 889999999998778889998876432 23445555543
No 281
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=29.41 E-value=50 Score=32.64 Aligned_cols=50 Identities=16% Similarity=-0.077 Sum_probs=40.1
Q ss_pred cHHHHHhCCCCEEEe-----CchhhccccccC-hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 80 SAEMLVNLEIPWVIL-----GHSERRLILNEL-NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 80 S~~mLkd~G~~~vii-----GHSERR~~f~Et-d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
-..++|++|++.|-+ .|--++-.|.=+ +..+.+=++.|.++||.+|++.|
T Consensus 45 ~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~G 100 (654)
T 3thd_A 45 RLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 100 (654)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccC
Confidence 467899999999999 887776555533 34577889999999999999974
No 282
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.30 E-value=1.7e+02 Score=23.85 Aligned_cols=18 Identities=22% Similarity=0.416 Sum_probs=8.6
Q ss_pred HHHHHHHHHHCCCeEEEE
Q 025540 110 VGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 110 i~~Kv~~al~~gl~pIlC 127 (251)
+.+-++.|.+.|...|++
T Consensus 93 ~~~~i~~A~~lGa~~v~~ 110 (262)
T 3p6l_A 93 WEKMFKFAKAMDLEFITC 110 (262)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEe
Confidence 444445555555544444
No 283
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=29.25 E-value=55 Score=27.47 Aligned_cols=51 Identities=10% Similarity=0.104 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEcccCccCCCCC-CCHHHH-HHHHHHHHHHHHh
Q 025540 142 DVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV-ATPAQA-QEVHFELRKWLLA 195 (251)
Q Consensus 142 ~~~~~Ql~~~l~~i~~~~~~iIAYEPvWAIGtG~~-a~~e~i-~~~~~~IR~~l~~ 195 (251)
+.|.+-.++.|......+--.||+ | +||||.- -+++++ +-+.+.||+++.+
T Consensus 130 ~~L~~~y~~~L~~A~~~~i~SIAf-P--~IstG~~g~P~~~aA~i~~~av~~fl~~ 182 (214)
T 3q6z_A 130 YLLRRAVQLSLCLAEKYKYRSIAI-P--AISSGVFGFPLGRCVETIVSAIKENFQF 182 (214)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEE-C--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 344444555554322122224666 7 8999876 245554 5678889888754
No 284
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=29.19 E-value=2.3e+02 Score=25.48 Aligned_cols=16 Identities=38% Similarity=0.414 Sum_probs=10.4
Q ss_pred CCHHHHHHHHHHHHHH
Q 025540 177 ATPAQAQEVHFELRKW 192 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~ 192 (251)
++|.++.+.++.+|+.
T Consensus 170 ~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 170 ATPRQVYALVREVRRV 185 (382)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 4577777666666654
No 285
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=28.83 E-value=2.5e+02 Score=23.60 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=40.7
Q ss_pred CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhcccccc--ChHHHHHHHHHHHHCCCeEEE
Q 025540 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNE--LNEFVGDKVAYALSQGLKVIA 126 (251)
Q Consensus 58 ~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~E--td~~i~~Kv~~al~~gl~pIl 126 (251)
....+|.+...+...=...=+...+.++++|.++|.+....-+..+.. +++.+.+=-+.+.++||.+..
T Consensus 18 ~~~~lgi~~~~~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 18 QGMKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp -CCCEEEEGGGGTTTSCSHHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccceecchHHHhccCCHHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 456789888877655222223445778999999999976543322211 122333333445579998754
No 286
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=28.67 E-value=43 Score=30.28 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=32.6
Q ss_pred cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc--h-HHHHHHHHH
Q 025540 204 ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK--P-EFIDIIKSA 248 (251)
Q Consensus 204 ~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~--~-~F~~Ii~~~ 248 (251)
++||+.-|+|.. +.+.+++ ..+.|++.||++.+. + -|.+|.+.+
T Consensus 277 ~ipII~~GGI~s~~da~~~l-~aGAd~V~vgra~l~~GP~~~~~i~~~l 324 (354)
T 4ef8_A 277 GKLIFGCGGVYTGEDAFLHV-LAGASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp TSEEEEESCCCSHHHHHHHH-HHTEEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHH-HcCCCEEEEhHHHHHhCHHHHHHHHHHH
Confidence 589999999864 5555666 479999999999885 4 355665543
No 287
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=28.51 E-value=2.5e+02 Score=23.11 Aligned_cols=107 Identities=13% Similarity=0.049 Sum_probs=56.7
Q ss_pred HHHHHhCCCCEEEeCchhhccccc--------cChHHHHHHHHHHHHCCCeEEEEe-CCcHHH-H--hcCCcHHHHHHHH
Q 025540 81 AEMLVNLEIPWVILGHSERRLILN--------ELNEFVGDKVAYALSQGLKVIACV-GETLEQ-R--EAGSTMDVVAAQT 148 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~--------Etd~~i~~Kv~~al~~gl~pIlCi-GE~~~~-r--~~g~~~~~~~~Ql 148 (251)
.+.|++.|.+.+-+....+. .+. +.-+.+.+-+..|.+.|...|++. |-.... + ...+..+.+.+.|
T Consensus 70 ~~~l~~~gl~v~~~~~~~~~-~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l 148 (287)
T 3kws_A 70 KQALNGRNIKVSAICAGFKG-FILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQF 148 (287)
T ss_dssp HHHHTTSSCEECEEECCCCS-CTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEecCCCC-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHH
Confidence 36677889988655333221 222 223566778888999999987763 310000 0 0112334445555
Q ss_pred HHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHH
Q 025540 149 KAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFEL 189 (251)
Q Consensus 149 ~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~I 189 (251)
+.+.+... ...+.|+|||.---.+....+++++.++++.+
T Consensus 149 ~~l~~~a~-~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 149 NEMGTFAA-QHGTSVIFEPLNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp HHHHHHHH-HTTCCEEECCCCTTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCEEEEEecCcccCcccCCHHHHHHHHHHc
Confidence 44443221 23578999965211233445777766555444
No 288
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.19 E-value=46 Score=32.46 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=39.0
Q ss_pred HHHHHhCCCCEEEeC-----chhhccccccC-hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 81 AEMLVNLEIPWVILG-----HSERRLILNEL-NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 81 ~~mLkd~G~~~viiG-----HSERR~~f~Et-d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
.+++|++|++.|-++ |--++-.|+.+ .+.+.+=++.|.++||.+|++.|
T Consensus 43 l~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 43 IKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp HHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 468999999999999 87776566554 23455668999999999999876
No 289
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=28.10 E-value=2.4e+02 Score=22.91 Aligned_cols=132 Identities=8% Similarity=0.042 Sum_probs=62.9
Q ss_pred cHHHHHhCCCCEEEe-Cchhhcccccc-ChHHHHHHHHHHHHCCCeE--EEEeCC--------cHHHHhcCCcHHHHHHH
Q 025540 80 SAEMLVNLEIPWVIL-GHSERRLILNE-LNEFVGDKVAYALSQGLKV--IACVGE--------TLEQREAGSTMDVVAAQ 147 (251)
Q Consensus 80 S~~mLkd~G~~~vii-GHSERR~~f~E-td~~i~~Kv~~al~~gl~p--IlCiGE--------~~~~r~~g~~~~~~~~Q 147 (251)
..+.++++|.++|.+ .+..+.....+ +++.+.+--+.+.++||.+ +.|-+- ..+.|+ ++.+.+.+.
T Consensus 17 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~--~~~~~~~~~ 94 (285)
T 1qtw_A 17 AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALE--KSRDAFIDE 94 (285)
T ss_dssp HHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHH--HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHH--HHHHHHHHH
Confidence 457789999999999 33332211111 2334444444556789985 444331 111121 123334444
Q ss_pred HHHHHhccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEcc------CC--CcccHH
Q 025540 148 TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG------SV--NGANCK 219 (251)
Q Consensus 148 l~~~l~~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGG------SV--~~~n~~ 219 (251)
++.+- .+. .+. |..-|-+.- +.....+..+.+.+.+++.+++.+ .+++.+=- .+ +++.+.
T Consensus 95 i~~A~-~lG--a~~-v~~~~g~~~--~~~~~~~~~~~~~~~l~~l~a~~~------gv~l~lEn~~~~~~~~~~~~~~~~ 162 (285)
T 1qtw_A 95 MQRCE-QLG--LSL-LNFHPGSHL--MQISEEDCLARIAESINIALDKTQ------GVTAVIENTAGQGSNLGFKFEHLA 162 (285)
T ss_dssp HHHHH-HTT--CCE-EEECCCBCT--TTSCHHHHHHHHHHHHHHHHHHCS------SCEEEEECCCCCTTBCCSSHHHHH
T ss_pred HHHHH-HcC--CCE-EEECcCCCC--CCCCHHHHHHHHHHHHHHHHhccC------CCEEEEecCCCCCCcccCCHHHHH
Confidence 43322 222 222 333442221 111234455777888888765433 46666521 11 455566
Q ss_pred HHhcCC
Q 025540 220 ELAAQP 225 (251)
Q Consensus 220 ~l~~~~ 225 (251)
+++..-
T Consensus 163 ~l~~~v 168 (285)
T 1qtw_A 163 AIIDGV 168 (285)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 776643
No 290
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=27.29 E-value=2.7e+02 Score=24.00 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=52.8
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhc
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR 154 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~ 154 (251)
.+..+++|.++|.|.--= ..=+.+.-.+=++.+.+.|++++.=+|-...+.+.-.+.+.+.+|++..|+.
T Consensus 91 l~~~k~lGf~~iEiS~G~----i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeA 160 (251)
T 1qwg_A 91 LNECEKLGFEAVEISDGS----SDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDA 160 (251)
T ss_dssp HHHHHHHTCCEEEECCSS----SCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCc----ccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHC
Confidence 467889999999885321 1223444446788899999999999998777666667888899999888874
No 291
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=27.14 E-value=80 Score=24.20 Aligned_cols=41 Identities=20% Similarity=0.159 Sum_probs=30.4
Q ss_pred ccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCc
Q 025540 79 ISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGET 131 (251)
Q Consensus 79 iS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~ 131 (251)
-.++.|++.||+.||+|.- ++ .-.....++|++|+.....+
T Consensus 67 ~~a~~L~~~gv~vVI~g~I------G~------~a~~~L~~~GI~v~~~~~g~ 107 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGI------GR------RAIAAFEAMGVKVIKGASGT 107 (136)
T ss_dssp CHHHHHHHTTCSEEECSCC------CH------HHHHHHHHTTCEEECSCCSB
T ss_pred HHHHHHHHCCCCEEEECCC------CH------HHHHHHHHCCCEEEecCCCC
Confidence 6789999999999999964 33 23445557899999765444
No 292
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.89 E-value=2.9e+02 Score=23.46 Aligned_cols=159 Identities=14% Similarity=0.082 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHhhccCCCCCCceeEEEcCccc------cHHHHHhhcC--CCceEeeecccccCCccccccccHHHHH
Q 025540 14 NGTPEEVKKIVSVLNEGQVPSSDVVEVVVSPPFV------FLGLVKSSLR--PGFHVAAQNCWVKKGGAFTGEISAEMLV 85 (251)
Q Consensus 14 n~~~~~~~~~~~~l~~~~~~~~~~~~v~i~Pp~~------~L~~~~~~~~--~~i~vgAQn~~~~~~Ga~TGeiS~~mLk 85 (251)
..+.++..++++.+.+.-. +.+++..+.... ....+.+.+. .++.+.+-- +..-..+...
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv---~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~---------~n~~~i~~a~ 89 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGY---ARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV---------PNMKGYEAAA 89 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTC---SEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC---------SSHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCc---CEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe---------CCHHHHHHHH
Confidence 3668888999988866322 345554422211 2233333333 234433211 1134467788
Q ss_pred hCCCCEEEeC------chhh--ccccccChHHHHHHHHHHHHCCCeEEEEeCCcHH-HHhcCCcHHHHHHHHHHHHhccC
Q 025540 86 NLEIPWVILG------HSER--RLILNELNEFVGDKVAYALSQGLKVIACVGETLE-QREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 86 d~G~~~viiG------HSER--R~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~-~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
+.|++.|-+- |.++ ++-+.|.-+.+.+-++.|.+.|+.+-..++-+.. +...--+.+.+.+-++.+.+. .
T Consensus 90 ~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G 168 (295)
T 1ydn_A 90 AAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL-G 168 (295)
T ss_dssp HTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH-T
T ss_pred HCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc-C
Confidence 9999988776 3333 3344556666667789999999998633332210 001113455666666554431 1
Q ss_pred CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHH
Q 025540 157 SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL 193 (251)
Q Consensus 157 ~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l 193 (251)
...+.|+= .+|. ++|+++.+.++.||+.+
T Consensus 169 -~d~i~l~D----t~G~---~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 169 -CHEVSLGD----TIGR---GTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp -CSEEEEEE----TTSC---CCHHHHHHHHHHHHTTS
T ss_pred -CCEEEecC----CCCC---cCHHHHHHHHHHHHHhC
Confidence 23455551 3443 68999999999998753
No 293
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=26.51 E-value=2.7e+02 Score=22.87 Aligned_cols=67 Identities=10% Similarity=0.026 Sum_probs=43.0
Q ss_pred eEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC
Q 025540 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE 130 (251)
Q Consensus 61 ~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE 130 (251)
++|.+..++.+.=..+=+-..+.++++|.++|.+.... +..-+++.+.+--+.+.++||.+..|.+-
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~---~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 69 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASP---LPFYSDIQINELKACAHGNGITLTVGHGP 69 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTT---GGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcc---cCCcCHHHHHHHHHHHHHcCCeEEEeecC
Confidence 46666666544222233556778999999999987543 11224555555556667899998887653
No 294
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=26.40 E-value=26 Score=34.09 Aligned_cols=39 Identities=10% Similarity=-0.004 Sum_probs=33.9
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc-hHHH
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK-PEFI 242 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~-~~F~ 242 (251)
++||+.-|+++ ++.+.+++....+|++.+|++.+- |+|.
T Consensus 294 ~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~ 334 (690)
T 3k30_A 294 TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLP 334 (690)
T ss_dssp SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHH
Confidence 58999999996 788999999888999999999996 7653
No 295
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=26.37 E-value=3.9e+02 Score=26.09 Aligned_cols=108 Identities=7% Similarity=0.080 Sum_probs=60.7
Q ss_pred HHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEe---CCcHHHHhcCCcHHHHHHHHHHHHhccCC
Q 025540 81 AEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV---GETLEQREAGSTMDVVAAQTKAIADRVSS 157 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCi---GE~~~~r~~g~~~~~~~~Ql~~~l~~i~~ 157 (251)
..++|++|++.+=+-| +-+++ .=+..|-+.||-++.-+ |.. .... .+...++++..+.....
T Consensus 324 l~l~k~~G~N~iR~~h------~p~~~----~~~dlcDe~Gi~V~~E~~~~~~~----~~~~-~~~~~~~~~~~v~r~rN 388 (692)
T 3fn9_A 324 LAAIMDVGATTVRFAH------YQQSD----YLYSRCDTLGLIIWAEIPCVNRV----TGYE-TENAQSQLRELIRQSFN 388 (692)
T ss_dssp HHHHHHHTCCEEEETT------SCCCH----HHHHHHHHHTCEEEEECCCBSCC----CSSC-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCEEEecC------CCCcH----HHHHHHHHCCCEEEEcccccCCC----CCHH-HHHHHHHHHHHHHHhcC
Confidence 4588999999998876 23444 45788999999988532 221 1112 45566777776654332
Q ss_pred CCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC
Q 025540 158 WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV 213 (251)
Q Consensus 158 ~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV 213 (251)
.+-||. |.+|.-.....+...+..+.+.+++++.. +.-++.|+..-
T Consensus 389 -HPSIi~----Ws~gNE~~~~~~~~~~~~~~l~~~~k~~D-----ptRpvt~~~~~ 434 (692)
T 3fn9_A 389 -HPSIYV----WGLHNEVYQPHEYTAALTRSLHDLAKTED-----PDRYTVSVNGY 434 (692)
T ss_dssp -CTTEEE----EEEEESCCSSHHHHHHHHHHHHHHHHHHC-----TTSEEEEEESS
T ss_pred -CCcceE----EEeccccCcccccHHHHHHHHHHHHHHHC-----CCCCEEEeCCC
Confidence 234444 66663222222333444445555554432 34566776544
No 296
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=26.32 E-value=1.6e+02 Score=24.61 Aligned_cols=45 Identities=11% Similarity=-0.103 Sum_probs=22.9
Q ss_pred HHHHHHhhccCCCCCCceeEEEcCccccH--HHHHhhcCCC-ceEeeecccccCC
Q 025540 21 KKIVSVLNEGQVPSSDVVEVVVSPPFVFL--GLVKSSLRPG-FHVAAQNCWVKKG 72 (251)
Q Consensus 21 ~~~~~~l~~~~~~~~~~~~v~i~Pp~~~L--~~~~~~~~~~-i~vgAQn~~~~~~ 72 (251)
..+++.+.+ .+...++.|+.... ....+.+ +. +.-|..|+++.-.
T Consensus 31 ~~~~~~l~~------aG~~pv~lp~~~~~~~~~~l~~~-DGlil~GG~~v~P~~y 78 (254)
T 3fij_A 31 QRYVDAIQK------VGGFPIALPIDDPSTAVQAISLV-DGLLLTGGQDITPQLY 78 (254)
T ss_dssp HHHHHHHHH------HTCEEEEECCCCGGGHHHHHHTC-SEEEECCCSCCCGGGG
T ss_pred HHHHHHHHH------CCCEEEEEeCCCchHHHHHHhhC-CEEEECCCCCCChhhc
Confidence 445555544 23466677876543 3222222 23 4567788765433
No 297
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=26.31 E-value=2e+02 Score=24.74 Aligned_cols=50 Identities=14% Similarity=0.116 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCC-CcccHHHHh---cCCCCCEEEEcC
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSV-NGANCKELA---AQPDVDGFLVGG 234 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV-~~~n~~~l~---~~~~vDG~LVG~ 234 (251)
.|.++=.++.+..++.. +..+||+.|-+- +...+.+++ ...++||+|+--
T Consensus 53 Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 53 VGSRERQAILSSFIAAG--------IAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp SCHHHHHHHHHHHHHTT--------CCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 35666555655555431 345788877443 555555554 356889998875
No 298
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=26.29 E-value=1.4e+02 Score=25.88 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=36.6
Q ss_pred ceeEEEcCccccHHHH---HhhcCCCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhcccc
Q 025540 37 VVEVVVSPPFVFLGLV---KSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLIL 103 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~---~~~~~~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f 103 (251)
+.+.++.|-.+....+ .+.+. +.+ |+-. .++-.|.+.|+++|++.|+.|.+-=|...
T Consensus 181 GAd~i~~e~~~~~~~~~~i~~~~~--~P~---n~~~-----~~~~~~~~eL~~lGv~~v~~~~~~~raa~ 240 (275)
T 2ze3_A 181 GADGIFVPLALQSQDIRALADALR--VPL---NVMA-----FPGSPVPRALLDAGAARVSFGQSLMLATL 240 (275)
T ss_dssp TCSEEECTTCCCHHHHHHHHHHCS--SCE---EEEC-----CTTSCCHHHHHHTTCSEEECTTHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHhcC--CCE---EEec-----CCCCCCHHHHHHcCCcEEEEChHHHHHHH
Confidence 4566666554444444 44443 333 3321 13578899999999999999999777543
No 299
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=26.23 E-value=20 Score=27.67 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=9.9
Q ss_pred cccCCccccccccHHHHHhCCCCEEEeCchh
Q 025540 68 WVKKGGAFTGEISAEMLVNLEIPWVILGHSE 98 (251)
Q Consensus 68 ~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSE 98 (251)
+....|||||.+-+.| .+=++.-+.||.|
T Consensus 4 ~~~~~~~~~~~~~~~~--~l~vKayl~~~~~ 32 (117)
T 2ktr_A 4 DTNNDGAYEGDELHMG--SLTVKAYLLGKEE 32 (117)
T ss_dssp ------------------CEEEEEEEECSSS
T ss_pred ecCCccceeccccccc--cEEEEEEEecCCC
Confidence 3467899999999888 4667778889877
No 300
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=26.18 E-value=27 Score=31.44 Aligned_cols=40 Identities=8% Similarity=0.109 Sum_probs=35.6
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc-hHHHH
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFID 243 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~-~~F~~ 243 (251)
..+|+.||..+++.+.+++..-.+|.+.+|++.|- |+|..
T Consensus 286 ~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~ 326 (358)
T 4a3u_A 286 KPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPR 326 (358)
T ss_dssp CSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHH
T ss_pred CCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHH
Confidence 36899999999999999999989999999999996 87754
No 301
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.60 E-value=64 Score=32.26 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+.+.+.++++.+|+. | ..+++|+.|| +-|....+.+...++|+++--|....
T Consensus 659 ~~~~~~~~vi~~L~~~-----G---~~~i~VivGG-~~p~~d~~~l~~~GaD~~f~~gt~~~ 711 (727)
T 1req_A 659 GHLTLVPALRKELDKL-----G---RPDILITVGG-VIPEQDFDELRKDGAVEIYTPGTVIP 711 (727)
T ss_dssp CHHHHHHHHHHHHHHT-----T---CTTSEEEEEE-SCCGGGHHHHHHTTEEEEECTTCCHH
T ss_pred hHHHHHHHHHHHHHhc-----C---CCCCEEEEcC-CCccccHHHHHhCCCCEEEcCCccHH
Confidence 3466677777777654 1 2358999999 44444567788899999998666654
No 302
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=25.56 E-value=1.7e+02 Score=26.87 Aligned_cols=75 Identities=20% Similarity=0.305 Sum_probs=41.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhc---CCccccCcceEEEccC---CCcccHHHHhcCCCCCEEEEcCccCc---hHHHH
Q 025540 173 TGKVATPAQAQEVHFELRKWLLAN---TSPEIAAATRIIYGGS---VNGANCKELAAQPDVDGFLVGGASLK---PEFID 243 (251)
Q Consensus 173 tG~~a~~e~i~~~~~~IR~~l~~~---~~~~~~~~i~ilYGGS---V~~~n~~~l~~~~~vDG~LVG~asl~---~~F~~ 243 (251)
|.-+++.+++++..+.=.+|+.+. .......-..|+-||. ....-+.++. ..+.||.-|||.|+- +.+.+
T Consensus 157 ~~~~~~~~~~~~sv~rT~rWa~r~~~~~~~~~~~lfgiVQGg~~~dLR~~sa~~l~-~~~~~GyaIGGlsvGe~~~~~~~ 235 (381)
T 2ash_A 157 PVPDADYEEVKEATERTYRWALRSKKAFKTENQALFGIVQGGIYPDLRRESALQLT-SIGFDGYAIGGLSIGEERSLTLE 235 (381)
T ss_dssp CC--CCHHHHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCHHHHHHHHHHHH-TTCCSEEEECSCSSSSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEcCCCCHHHHHHHHHHHH-hcCCceEEecCcccCCCHHHHHH
Confidence 344677788766555444454321 1111011235555554 2223344544 457999999998873 57888
Q ss_pred HHHHH
Q 025540 244 IIKSA 248 (251)
Q Consensus 244 Ii~~~ 248 (251)
+++.+
T Consensus 236 ~l~~~ 240 (381)
T 2ash_A 236 MTEVT 240 (381)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 303
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=25.44 E-value=31 Score=31.00 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHCCCeEEEE
Q 025540 108 EFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC 127 (251)
+.+.+.+..|.+.|...|++
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv 135 (394)
T 1xla_A 116 AKVLHNIDLAAEMGAETFVM 135 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEE
Confidence 45667788888888876654
No 304
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=25.37 E-value=16 Score=20.22 Aligned_cols=7 Identities=57% Similarity=1.564 Sum_probs=5.5
Q ss_pred EEcccCc
Q 025540 164 AYEPVWA 170 (251)
Q Consensus 164 AYEPvWA 170 (251)
-|||-|-
T Consensus 14 kyepfwe 20 (26)
T 1nrp_R 14 KYEPFWE 20 (26)
T ss_pred ccCcccc
Confidence 5999994
No 305
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=25.26 E-value=46 Score=30.45 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=28.6
Q ss_pred CcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 203 AATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 203 ~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++++|+--|+|....+..-+-..+.|++.||++-+.
T Consensus 306 ~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 306 GKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp TSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 358999999988766655555589999999998764
No 306
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=25.24 E-value=1.5e+02 Score=26.07 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=39.2
Q ss_pred ceeEEEcCccccHHHHHhhcC-CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccc
Q 025540 37 VVEVVVSPPFVFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLI 102 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~~~~~~-~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~ 102 (251)
+.|.++.|.......+..... -++.+-+ |+- . |.-|...|.+.|+++|++.|+.|++==|..
T Consensus 184 GAD~if~~~~~~~ee~~~~~~~~~~Pl~~-n~~--~-~g~tp~~~~~eL~~lGv~~v~~~~~~~raa 246 (298)
T 3eoo_A 184 GADMIFPEAMKTLDDYRRFKEAVKVPILA-NLT--E-FGSTPLFTLDELKGANVDIALYCCGAYRAM 246 (298)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHCSCBEE-ECC--T-TSSSCCCCHHHHHHTTCCEEEECSHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHcCCCeEE-Eec--c-CCCCCCCCHHHHHHcCCeEEEEchHHHHHH
Confidence 456666665556666554332 1222222 332 2 223677899999999999999998877654
No 307
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=25.06 E-value=31 Score=30.59 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=27.3
Q ss_pred cceEEEccCCC-cccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~-~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+-.|+|. ++.+.+.+. .+.|+++||++-+.
T Consensus 251 ~ipvia~GGI~~~~d~~k~l~-~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 251 ASTMIASGGLQDALDVAKAIA-LGASCTGMAGHFLK 285 (349)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHH
Confidence 58999999987 566666555 59999999998765
No 308
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.75 E-value=2.1e+02 Score=23.22 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=9.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEE
Q 025540 107 NEFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 107 d~~i~~Kv~~al~~gl~pIlC 127 (251)
.+.+.+-++.|.+.|...|+|
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEe
Confidence 334444444444444444443
No 309
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=23.79 E-value=2.4e+02 Score=23.99 Aligned_cols=42 Identities=7% Similarity=-0.096 Sum_probs=27.4
Q ss_pred HHHHHHHHCCCeEEEE--eCCcHHHHhcCCcHHHHHHHHHHHHh
Q 025540 112 DKVAYALSQGLKVIAC--VGETLEQREAGSTMDVVAAQTKAIAD 153 (251)
Q Consensus 112 ~Kv~~al~~gl~pIlC--iGE~~~~r~~g~~~~~~~~Ql~~~l~ 153 (251)
..+...++.|..||++ ++-+.+..-..-+.|.+...+...|.
T Consensus 134 ~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~ 177 (266)
T 3k4o_A 134 SAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELK 177 (266)
T ss_dssp HHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcC
Confidence 5889999999999998 23332111112256777777777775
No 310
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=23.63 E-value=38 Score=28.18 Aligned_cols=51 Identities=14% Similarity=0.062 Sum_probs=37.0
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCcc
Q 025540 171 IGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 236 (251)
Q Consensus 171 IGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~as 236 (251)
=|||++.+-+.+.+.. ....|++-.|+++|+|..+.+...+.+|+=|.+..
T Consensus 133 GGtG~~fdw~~l~~~~---------------~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 133 GGSGKTFDWSLILPYR---------------DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp SSCCSCCCGGGTGGGG---------------GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGG
T ss_pred CCCCCccCHHHHHhhh---------------cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCce
Confidence 3799998775543210 11368999999999999888776677888777653
No 311
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=23.42 E-value=50 Score=28.51 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCcceEE---EccCCCcccHHHHhcC----CCCCEEEEcCccCch
Q 025540 179 PAQAQEVHFELRKWLLANTSPEIAAATRII---YGGSVNGANCKELAAQ----PDVDGFLVGGASLKP 239 (251)
Q Consensus 179 ~e~i~~~~~~IR~~l~~~~~~~~~~~i~il---YGGSV~~~n~~~l~~~----~~vDG~LVG~asl~~ 239 (251)
.+.++++.++|+.++... .+-....+-|. |||---|.=+..+... -++.|++||...+++
T Consensus 122 ~~~a~~~~~fl~~f~~~f-p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 122 NRTAHDSYAFLAKWFERF-PHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp HHHHHHHHHHHHHHHHHC-GGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred HHHHHHHHHHHHHHHHhC-HHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 456788999999998742 21112233333 7888888888888753 578999999999983
No 312
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.42 E-value=1.1e+02 Score=24.59 Aligned_cols=63 Identities=17% Similarity=0.157 Sum_probs=43.6
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHC-CCeEEEEeCCcHHHHhcCCcHHHHH
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ-GLKVIACVGETLEQREAGSTMDVVA 145 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~-gl~pIlCiGE~~~~r~~g~~~~~~~ 145 (251)
.|..-+++|++.|++-+- +....++-+.|.+.++.+++. +...|++.|-+--. ..+-|.+.+.
T Consensus 41 n~~~L~~~l~~~G~~v~~------~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g-~~D~t~eal~ 104 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIG------YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS-PTDITVETIR 104 (178)
T ss_dssp HHHHHHHHHHHTTCEEEE------EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS-TTCCHHHHHG
T ss_pred HHHHHHHHHHHCCCEEEE------EEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCcchHHHHH
Confidence 344567899999987653 344567778899999999976 68899999876422 1234555544
No 313
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=23.37 E-value=3e+02 Score=22.34 Aligned_cols=48 Identities=15% Similarity=0.017 Sum_probs=30.0
Q ss_pred HHHHHhCCCCEEEe-Cchhhcc-------------ccccC-hHHHHHHHHHHHHCCCeEEEEe
Q 025540 81 AEMLVNLEIPWVIL-GHSERRL-------------ILNEL-NEFVGDKVAYALSQGLKVIACV 128 (251)
Q Consensus 81 ~~mLkd~G~~~vii-GHSERR~-------------~f~Et-d~~i~~Kv~~al~~gl~pIlCi 128 (251)
.+.+|++|++.|=+ +|++-.. ..+++ -+.+..-+..|-++||.+|+++
T Consensus 48 l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 48 FKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 45788999998833 3333211 01111 2334466788999999999987
No 314
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=23.31 E-value=51 Score=29.78 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=28.2
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
+++|+--|+|.......-+-..+.|+++||++-|.
T Consensus 284 ~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~ 318 (368)
T 2nli_A 284 RVPIVFDSGVRRGEHVAKALASGADVVALGRPVLF 318 (368)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 58999999998776665555589999999997664
No 315
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=23.27 E-value=3.8e+02 Score=23.54 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=43.5
Q ss_pred ceeEEEcCccccHHHHHhhcCCCceEeeecccccCCcccccc----ccHHHHHhCCCCEEEeCchhhccccccCh-HHHH
Q 025540 37 VVEVVVSPPFVFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGE----ISAEMLVNLEIPWVILGHSERRLILNELN-EFVG 111 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~~~~~~~~i~vgAQn~~~~~~Ga~TGe----iS~~mLkd~G~~~viiGHSERR~~f~Etd-~~i~ 111 (251)
+++-+||+|.- +..+++.....+.+-.--+.+ .|+-.|+ .++....+.|+++.++| |-.|+-.| ....
T Consensus 171 G~dGvV~s~~E-~~~IR~~~~~~fl~VTPGIr~--qG~~~~DQ~Rv~t~~~a~~aGAd~iVvG----r~I~~a~dp~~a~ 243 (303)
T 3ru6_A 171 GLDGMVCSVFE-SKKIKEHTSSNFLTLTPGIRP--FGETNDDQKRVANLAMARENLSDYIVVG----RPIYKNENPRAVC 243 (303)
T ss_dssp TCSEEECCTTT-HHHHHHHSCTTSEEEECCCCT--TC--------CCSHHHHHHTTCSEEEEC----HHHHTSSCHHHHH
T ss_pred CCCEEEECHHH-HHHHHHhCCCccEEECCCcCc--ccCCcccccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHHH
Confidence 46678887654 566666655444332333332 2444565 48888899999999999 56776444 3344
Q ss_pred HHHHHHH
Q 025540 112 DKVAYAL 118 (251)
Q Consensus 112 ~Kv~~al 118 (251)
++++..+
T Consensus 244 ~~i~~~i 250 (303)
T 3ru6_A 244 EKILNKI 250 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 316
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=23.19 E-value=19 Score=20.14 Aligned_cols=7 Identities=57% Similarity=1.564 Sum_probs=5.5
Q ss_pred EEcccCc
Q 025540 164 AYEPVWA 170 (251)
Q Consensus 164 AYEPvWA 170 (251)
-|||-|-
T Consensus 14 kyepfwe 20 (27)
T 1nro_R 14 KYEPFWE 20 (27)
T ss_pred ccCcccc
Confidence 5999983
No 317
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=23.07 E-value=53 Score=33.94 Aligned_cols=49 Identities=14% Similarity=-0.065 Sum_probs=40.0
Q ss_pred HHHHHhCCCCEEEe-----CchhhccccccC-hHHHHHHHHHHHHCCCeEEEEeC
Q 025540 81 AEMLVNLEIPWVIL-----GHSERRLILNEL-NEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 81 ~~mLkd~G~~~vii-----GHSERR~~f~Et-d~~i~~Kv~~al~~gl~pIlCiG 129 (251)
.+++|++|++.|-+ -|-.++-.|.-+ ...+.+=++.|.++||.+|++.|
T Consensus 42 l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 42 FEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp HHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 57899999999999 677777666544 33456888999999999999998
No 318
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=23.04 E-value=75 Score=31.94 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
.+.+.+.++++.+|+. | ..+++|+.|| +-|....+.+...++|+++-=|....
T Consensus 667 ~~~~~~~~vi~~Lr~~-----G---~~dv~VivGG-~~P~~d~~~l~~~GaD~~f~pgtd~~ 719 (762)
T 2xij_A 667 GHKTLVPELIKELNSL-----G---RPDILVMCGG-VIPPQDYEFLFEVGVSNVFGPGTRIP 719 (762)
T ss_dssp CHHHHHHHHHHHHHHT-----T---CTTSEEEEEE-SCCGGGHHHHHHHTCCEEECTTCCHH
T ss_pred HHHHHHHHHHHHHHhc-----C---CCCCEEEEeC-CCCcccHHHHHhCCCCEEeCCCCCHH
Confidence 3466667777777754 1 2358899998 66666667788899999988555444
No 319
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=23.04 E-value=3.6e+02 Score=23.67 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=76.2
Q ss_pred cHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCCC
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS 159 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~~ 159 (251)
-.+...+.|++.+.|-- ..+|. +....-++.|.++|+.+++++-.. ...+.+.+.+..+.+.+. . ..
T Consensus 98 ~i~~a~~aGvd~v~I~~-----~~s~~-~~~~~~i~~ak~~G~~v~~~~~~a-----~~~~~e~~~~ia~~~~~~-G-a~ 164 (345)
T 1nvm_A 98 DLKNAYQAGARVVRVAT-----HCTEA-DVSKQHIEYARNLGMDTVGFLMMS-----HMIPAEKLAEQGKLMESY-G-AT 164 (345)
T ss_dssp HHHHHHHHTCCEEEEEE-----ETTCG-GGGHHHHHHHHHHTCEEEEEEEST-----TSSCHHHHHHHHHHHHHH-T-CS
T ss_pred HHHHHHhCCcCEEEEEE-----eccHH-HHHHHHHHHHHHCCCEEEEEEEeC-----CCCCHHHHHHHHHHHHHC-C-CC
Confidence 46778899999987742 12222 234566778889999999887211 123456677776665542 1 11
Q ss_pred CeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEE------ccCCCcccHHHHhcCCCCCEEEEc
Q 025540 160 NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIY------GGSVNGANCKELAAQPDVDGFLVG 233 (251)
Q Consensus 160 ~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilY------GGSV~~~n~~~l~~~~~vDG~LVG 233 (251)
+|.. =+|--..+|+++.+.++.+|+.+. +++||-+ |=+|-..-+.--+...-|||.+.|
T Consensus 165 --~i~l-----~DT~G~~~P~~v~~lv~~l~~~~~--------~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~G 229 (345)
T 1nvm_A 165 --CIYM-----ADSGGAMSMNDIRDRMRAFKAVLK--------PETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAG 229 (345)
T ss_dssp --EEEE-----ECTTCCCCHHHHHHHHHHHHHHSC--------TTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred --EEEE-----CCCcCccCHHHHHHHHHHHHHhcC--------CCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchh
Confidence 2221 134334579999999999997631 2477777 655544333334444557877755
No 320
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.04 E-value=94 Score=26.87 Aligned_cols=44 Identities=18% Similarity=0.096 Sum_probs=32.8
Q ss_pred cceEEEccCCCc------ccHHHHhcCCCCCEEEEcCccCc--hHHHHHHHH
Q 025540 204 ATRIIYGGSVNG------ANCKELAAQPDVDGFLVGGASLK--PEFIDIIKS 247 (251)
Q Consensus 204 ~i~ilYGGSV~~------~n~~~l~~~~~vDG~LVG~asl~--~~F~~Ii~~ 247 (251)
++|++.=+-.|| ++..+-+...++||+++....++ ..|.+.++.
T Consensus 95 ~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~ 146 (267)
T 3vnd_A 95 DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKA 146 (267)
T ss_dssp TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHH
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHH
Confidence 466654455555 77788888899999999988776 467777765
No 321
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=22.91 E-value=2.6e+02 Score=22.63 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEE
Q 025540 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125 (251)
Q Consensus 58 ~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pI 125 (251)
..+++|.|..++.+ ++=+-..+.++++|.++|.+.-. + ..+.-+++.+.+=.+.+.++||.+.
T Consensus 16 ~~~klg~~~~~~~~---~~~~~~l~~~~~~G~~~vEl~~~-~-~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 16 NPFHLGMAGYTFVN---FDLDTTLKTLERLDIHYLCIKDF-H-LPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp CSSEEEECGGGGTT---SCHHHHHHHHHHTTCCEEEECTT-T-SCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEEeecC---CCHHHHHHHHHHhCCCEEEEecc-c-CCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 46889999988765 34466788899999999998743 1 1133455556555566668999854
No 322
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=22.65 E-value=92 Score=19.00 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=19.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Q 025540 173 TGKVATPAQAQEVHFELRKWLLA 195 (251)
Q Consensus 173 tG~~a~~e~i~~~~~~IR~~l~~ 195 (251)
-|.-|++|+..+-...+|.++.-
T Consensus 8 PG~dA~~Eela~Y~~~LrhYiNl 30 (36)
T 2bf9_A 8 PGDDAPVEDLIRFYNDLQQYLNV 30 (36)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 36779999999999999998754
No 323
>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*
Probab=22.35 E-value=1.2e+02 Score=27.91 Aligned_cols=69 Identities=17% Similarity=0.212 Sum_probs=47.4
Q ss_pred ccCCCCC--------CCHHHHHHHHHHHHHHHHhcCCcccc--CcceEE---EccCCCcccHHHHhcC----CCCCEEEE
Q 025540 170 AIGTGKV--------ATPAQAQEVHFELRKWLLANTSPEIA--AATRII---YGGSVNGANCKELAAQ----PDVDGFLV 232 (251)
Q Consensus 170 AIGtG~~--------a~~e~i~~~~~~IR~~l~~~~~~~~~--~~i~il---YGGSV~~~n~~~l~~~----~~vDG~LV 232 (251)
-+|||-+ -+.+.+++++.+|+.++... ..-.. ..+-|. |||---|.=+..+... .++.|++|
T Consensus 96 PvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~-p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~I 174 (421)
T 1cpy_A 96 PVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQF-PEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp STTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHC-TTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEE
T ss_pred CCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhC-HHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEe
Confidence 3588754 12456789999999998753 22112 233333 7888888888888764 57899999
Q ss_pred cCccCch
Q 025540 233 GGASLKP 239 (251)
Q Consensus 233 G~asl~~ 239 (251)
|..-.++
T Consensus 175 GNg~~dp 181 (421)
T 1cpy_A 175 GNGLTDP 181 (421)
T ss_dssp ESCCCCH
T ss_pred cCcccCh
Confidence 9988873
No 324
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=22.24 E-value=81 Score=29.12 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=28.4
Q ss_pred cceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 204 ATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 204 ~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++||+..|+|.......-+...+.|++.+|++-+.
T Consensus 336 ~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 336 GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAG 370 (491)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred CCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhC
Confidence 58999999988766655555679999999998763
No 325
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=22.19 E-value=2e+02 Score=25.43 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=45.9
Q ss_pred ceeEEEcCccccHHHHHhhcC--CCceEeeecccccCCccccccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHH
Q 025540 37 VVEVVVSPPFVFLGLVKSSLR--PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKV 114 (251)
Q Consensus 37 ~~~v~i~Pp~~~L~~~~~~~~--~~i~vgAQn~~~~~~Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv 114 (251)
+.|.++.|.......+..... .+..+-+ |+- . |.-|..+|.+.|+++|++.|+.+.+--|..+.-- .+-.
T Consensus 183 GAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~-n~~--~-~g~~p~~~~~eL~~lGv~~v~~~~~~~raa~~A~----~~~~ 254 (302)
T 3fa4_A 183 GADVGFLEGITSREMARQVIQDLAGWPLLL-NMV--E-HGATPSISAAEAKEMGFRIIIFPFAALGPAVAAM----REAM 254 (302)
T ss_dssp TCSEEEETTCCCHHHHHHHHHHTTTSCEEE-ECC--T-TSSSCCCCHHHHHHHTCSEEEETTTTHHHHHHHH----HHHH
T ss_pred CCCEEeecCCCCHHHHHHHHHHhcCCceeE-EEe--c-CCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHH----HHHH
Confidence 456666665555555544332 1122211 332 2 2335678999999999999999999887654332 2344
Q ss_pred HHHHHCCC
Q 025540 115 AYALSQGL 122 (251)
Q Consensus 115 ~~al~~gl 122 (251)
+..++.|-
T Consensus 255 ~~i~~~g~ 262 (302)
T 3fa4_A 255 EKLKRDGI 262 (302)
T ss_dssp HHHHHHSS
T ss_pred HHHHHcCC
Confidence 44455554
No 326
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=22.16 E-value=4.3e+02 Score=23.78 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=15.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCCcH
Q 025540 110 VGDKVAYALSQGLKVIACVGETL 132 (251)
Q Consensus 110 i~~Kv~~al~~gl~pIlCiGE~~ 132 (251)
+.+=++..+++|..-|+..|.|-
T Consensus 82 l~~lv~~li~~Gv~Gl~v~GTTG 104 (360)
T 4dpp_A 82 YDDLVNIQIQNGAEGVIVGGTTG 104 (360)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHcCCCEEEeccccc
Confidence 44455666778888888777653
No 327
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=22.10 E-value=50 Score=26.13 Aligned_cols=44 Identities=7% Similarity=-0.062 Sum_probs=27.1
Q ss_pred EEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccH
Q 025540 164 AYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANC 218 (251)
Q Consensus 164 AYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~ 218 (251)
+|.|.-. ..-..+++++++++.+.|++ +++.-|+.||++...++
T Consensus 7 ~~~~~~~-~~~~~~~~~~v~~aa~~L~~----------AkrPvil~G~g~~~~~a 50 (170)
T 3cf4_G 7 NTKLFTS-YGVNTSKAVSPEMAAKIISK----------AKRPLLMVGTLALDPEL 50 (170)
T ss_dssp CCCCSSC-SCSCCCEECCHHHHHHHHHH----------CSSEEEEECSTTCCHHH
T ss_pred CCccccc-CCCCCcCHHHHHHHHHHHHc----------CCCCEEEECCCccchhH
Confidence 4555433 33345666778888887765 45555777777875554
No 328
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=21.97 E-value=1.1e+02 Score=24.97 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=43.8
Q ss_pred cccccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHH
Q 025540 76 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVA 145 (251)
Q Consensus 76 TGeiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~ 145 (251)
.|..-+.+|++.|++.+- +....++-+.|.+.++.+++.+...|++.|-+--. ..+-|.+.+.
T Consensus 50 n~~~L~~~L~~~G~~v~~------~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g-~~D~t~eal~ 112 (185)
T 3rfq_A 50 SGPLVTELLTEAGFVVDG------VVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT-PRDVTPESTR 112 (185)
T ss_dssp HHHHHHHHHHHTTEEEEE------EEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS-TTCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE------EEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CcccHHHHHH
Confidence 344567889999977653 34557777889999999987788899999877422 2334555544
No 329
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=21.33 E-value=88 Score=25.35 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=27.1
Q ss_pred EEEccCCCcc--cHHHHhcCCCCCEEEEcCccCc-hHHHHHH
Q 025540 207 IIYGGSVNGA--NCKELAAQPDVDGFLVGGASLK-PEFIDII 245 (251)
Q Consensus 207 ilYGGSV~~~--n~~~l~~~~~vDG~LVG~asl~-~~F~~Ii 245 (251)
++.=|+|+++ |+.+.+. .+.|++.+|++-+. ++..+.+
T Consensus 158 ~iv~gGI~~~g~~~~~~~~-aGad~vvvGr~I~~a~dp~~~~ 198 (208)
T 2czd_A 158 KILAPGIGAQGGKAKDAVK-AGADYIIVGRAIYNAPNPREAA 198 (208)
T ss_dssp EEEECCCCSSTTHHHHHHH-HTCSEEEECHHHHTSSSHHHHH
T ss_pred EEEECCCCCCCCCHHHHHH-cCCCEEEEChHHhcCCCHHHHH
Confidence 4467789987 7777664 58999999998776 3433333
No 330
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=21.25 E-value=48 Score=24.97 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=31.7
Q ss_pred CCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeC
Q 025540 89 IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVG 129 (251)
Q Consensus 89 ~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiG 129 (251)
++.++.|-+.+ + -..+..+...++..+++|+.+..|..
T Consensus 42 V~i~~~G~~v~--L-~~~~~~l~~~~~~~~~~Gv~~~aC~~ 79 (117)
T 2fb6_A 42 INIILWGASVK--L-VANDTQVQTEILEMLQSGITIEACQD 79 (117)
T ss_dssp EEEEECSHHHH--H-HHHCHHHHHHHHHHHHHTCEEEEEHH
T ss_pred EEEEEECCeee--e-ccCCccHHHHHHHHHHcCCeEEEeHH
Confidence 78888999998 3 34456689999999999999999976
No 331
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=21.15 E-value=43 Score=31.85 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=29.0
Q ss_pred cCcceEEEccCCCcccHHHHhcCCCCCEEEEcCccCc
Q 025540 202 AAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 202 ~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
..+++|+--|+|.......-+-..+.|++.||++-|-
T Consensus 401 ~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 401 KDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLY 437 (511)
T ss_dssp BTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 3469999988888766655555579999999998764
No 332
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=21.08 E-value=3.4e+02 Score=25.03 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=72.3
Q ss_pred HHHHHhCCCCEE-----E-eC-chhhccccccChHHHHHHHHHHHHCCCeEEE-----EeCCcHHHHhcCCcHHHHHHHH
Q 025540 81 AEMLVNLEIPWV-----I-LG-HSERRLILNELNEFVGDKVAYALSQGLKVIA-----CVGETLEQREAGSTMDVVAAQT 148 (251)
Q Consensus 81 ~~mLkd~G~~~v-----i-iG-HSERR~~f~Etd~~i~~Kv~~al~~gl~pIl-----CiGE~~~~r~~g~~~~~~~~Ql 148 (251)
...-+..||++. | |+ |.--..-..|.-...++=...|.++||.||| +=|+..-+|-.--|+.++....
T Consensus 164 ~a~y~~~Ga~FAKWRsViki~~~~PS~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~ 243 (391)
T 2qap_A 164 ASAYYKKGCRFCKWRNVYKIQNGTVSESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVV 243 (391)
T ss_dssp HHHHHHTTCCEEEEEEEECCBTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcceeeeeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHH
Confidence 455678896653 2 22 3333444556667777788899999999997 3344432332223333333333
Q ss_pred HHHHhccC-CCCCeEEEEcccCcc-C--CCCCCCHHHHHH-HHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHh-
Q 025540 149 KAIADRVS-SWSNIVLAYEPVWAI-G--TGKVATPAQAQE-VHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELA- 222 (251)
Q Consensus 149 ~~~l~~i~-~~~~~iIAYEPvWAI-G--tG~~a~~e~i~~-~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~- 222 (251)
+.+-+ -. -++-.++ .|--.+ | ..+.++||++.+ .+..+|..+--. -..|-.|=|| -+.+.+...+
T Consensus 244 kaL~d-~~V~LegtLL--KPnMv~pG~~~~~k~s~eevA~~Tv~~L~rtVPpa-----VpgIvFLSGG-qSeeeAt~~Ln 314 (391)
T 2qap_A 244 AALQR-HGVIWEGCLL--KPNMVVPGAESGKTAAPEQVAHYTVMTLARTMPAM-----LPGVMFLSGG-LSEVQASEYLN 314 (391)
T ss_dssp HHHHH-HTCCGGGCEE--CCCCCCCCTTSSCCCCHHHHHHHHHHHHHHHSBTT-----CCEEEECCTT-CCHHHHHHHHH
T ss_pred HHhcC-CeEEecCccc--cCcccccCccccccCCHHHHHHHHHHHHhhcCCCc-----cCeeeeCCCC-CCHHHHHHHHh
Confidence 33221 11 1222222 443322 2 234578888864 777777765321 1334445555 4555555555
Q ss_pred cCCCCC
Q 025540 223 AQPDVD 228 (251)
Q Consensus 223 ~~~~vD 228 (251)
....++
T Consensus 315 A~N~~~ 320 (391)
T 2qap_A 315 AINNSP 320 (391)
T ss_dssp HHTTCC
T ss_pred ccccCC
Confidence 444444
No 333
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.04 E-value=1.5e+02 Score=23.52 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=36.7
Q ss_pred cccHHHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHC-CCeEEEEeCCc
Q 025540 78 EISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ-GLKVIACVGET 131 (251)
Q Consensus 78 eiS~~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~-gl~pIlCiGE~ 131 (251)
..-+++|++.|++.+ +.....++-+.|.+.++.+++. +-..|++.|=+
T Consensus 31 ~~l~~~L~~~G~~v~------~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~ 79 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVV------DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGT 79 (172)
T ss_dssp HHHHHHHHHTTCEEE------EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCC
T ss_pred HHHHHHHHHCCCeEe------EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCC
Confidence 345788999998654 3345567778899999999986 67888998866
No 334
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=20.94 E-value=5.9e+02 Score=26.16 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=61.0
Q ss_pred HHHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCeEEEEeCC-cHH-----H--HhcCCcHHHHHHHHHHHHh
Q 025540 82 EMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGE-TLE-----Q--REAGSTMDVVAAQTKAIAD 153 (251)
Q Consensus 82 ~mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE-~~~-----~--r~~g~~~~~~~~Ql~~~l~ 153 (251)
.++|++|++.|=+.|-. +++ .=...|-+.||-++..+.- +-. . .......+...++++..+.
T Consensus 379 ~lmK~~G~N~IR~~hyp------~~~----~~ydlcDe~Gi~V~~E~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~mV~ 448 (1010)
T 3bga_A 379 RLMKQHNINMVRNSHYP------THP----YWYQLCDRYGLYMIDEANIESHGMGYGPASLAKDSTWLTAHMDRTHRMYE 448 (1010)
T ss_dssp HHHHHTTCCEEEETTSC------CCH----HHHHHHHHHTCEEEEECSCBCGGGCSSTTCTTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEeCCCC------CCH----HHHHHHHHCCCEEEEccCccccCccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence 68899999999776643 333 4568899999999876421 000 0 0011233444556666555
Q ss_pred ccCCCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccC
Q 025540 154 RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 212 (251)
Q Consensus 154 ~i~~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGS 212 (251)
... ..+-||+ |.+|. .+...+.++++.+.+|+. .+.=+|.|+++
T Consensus 449 r~r-NHPSIi~----WslgN-E~~~g~~~~~l~~~ik~~---------DptRpV~~~~~ 492 (1010)
T 3bga_A 449 RSK-NHPAIVI----WSQGN-EAGNGINFERTYDWLKSV---------EKGRPVQYERA 492 (1010)
T ss_dssp HHT-TCTTEEE----EECCS-SSCCSHHHHHHHHHHHHH---------CSSSCEECGGG
T ss_pred HhC-CCCEEEE----EECcc-CcCcHHHHHHHHHHHHHH---------CCCCcEEeCCC
Confidence 432 2344554 56662 222334567777777764 23446778764
No 335
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.90 E-value=2.2e+02 Score=24.56 Aligned_cols=93 Identities=13% Similarity=0.177 Sum_probs=55.9
Q ss_pred cHHHHHhCCCCEEEeCchhhccccc----cChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHh-c
Q 025540 80 SAEMLVNLEIPWVILGHSERRLILN----ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-R 154 (251)
Q Consensus 80 S~~mLkd~G~~~viiGHSERR~~f~----Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~-~ 154 (251)
-..||+|+|++-+ ++|- ..-+++..-.++|.++|+ -+==.| |-..+-+.+=++.+|+ +
T Consensus 150 Aiaml~dmG~~Sv--------KffPm~Gl~~l~E~~avAka~a~~g~-~lEPTG--------GIdl~N~~~I~~i~l~aG 212 (249)
T 3m0z_A 150 AIALLKDMGGSSI--------KYFPMGGLKHRAEFEAVAKACAAHDF-WLEPTG--------GIDLENYSEILKIALDAG 212 (249)
T ss_dssp HHHHHHHTTCCEE--------EECCCTTTTTHHHHHHHHHHHHHTTC-EEEEBS--------SCCTTTHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCee--------eEeecCCcccHHHHHHHHHHHHHcCc-eECCCC--------CccHhhHHHHHHHHHHcC
Confidence 4679999998876 5553 445677888999999999 221122 2222223333333343 2
Q ss_pred cCC-CCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHH
Q 025540 155 VSS-WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL 193 (251)
Q Consensus 155 i~~-~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l 193 (251)
++. ..++ |--+=-=.||.| .||++++..+.+++++
T Consensus 213 v~~viPHI---YssIIDk~TG~T-rpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 213 VSKIIPHI---YSSIIDKASGNT-RPADVRQLLEMTKQLV 248 (249)
T ss_dssp CSCBCCBC---CGGGBCTTTCCB-CHHHHHHHHHHHHHHC
T ss_pred CCeecccc---cceeccCCCCCC-CHHHHHHHHHHHHHhh
Confidence 221 1222 433323367876 4999999999998763
No 336
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=20.89 E-value=47 Score=28.53 Aligned_cols=125 Identities=18% Similarity=0.166 Sum_probs=70.2
Q ss_pred HHHHHhCCCCEEEeC--chhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccCCC
Q 025540 81 AEMLVNLEIPWVILG--HSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW 158 (251)
Q Consensus 81 ~~mLkd~G~~~viiG--HSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~~~ 158 (251)
.+.+...|++++++- |+= ...+.+..-+..+...|..+++=|-... . .+|+.+++. . .
T Consensus 32 ~e~a~~~GaD~v~lDlE~~~------~~~~~~~~~~~a~~~~~~~~~VRv~~~~--------~----~~i~~~l~~-g-~ 91 (267)
T 2vws_A 32 AEIAATSGYDWLLIDGEHAP------NTIQDLYHQLQAVAPYASQPVIRPVEGS--------K----PLIKQVLDI-G-A 91 (267)
T ss_dssp HHHHHTTCCSEEEEETTTSC------CCHHHHHHHHHHHTTSSSEEEEECSSCC--------H----HHHHHHHHT-T-C
T ss_pred HHHHHhCCCCEEEEcCCCCC------CCHHHHHHHHHHHHhCCCcEEEEeCCCC--------H----HHHHHHHHh-C-C
Confidence 455667788888886 431 1234455555555456788888886431 1 456666652 1 2
Q ss_pred CCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHH----------H--HhcCC------ccccCcceEEEccCC----Ccc
Q 025540 159 SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKW----------L--LANTS------PEIAAATRIIYGGSV----NGA 216 (251)
Q Consensus 159 ~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~----------l--~~~~~------~~~~~~i~ilYGGSV----~~~ 216 (251)
..+++ .+.-|+++++++.+.+|.- + ...|| ...+++++ .+--| .-.
T Consensus 92 ~~I~~----------P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~--v~~~IEt~~av~ 159 (267)
T 2vws_A 92 QTLLI----------PMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLC--LLVQVESKTALD 159 (267)
T ss_dssp CEEEE----------CCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCE--EEEECCSHHHHH
T ss_pred CEEEe----------CCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccE--EEEEECCHHHHH
Confidence 23333 3677899988887766421 0 00011 00011122 22222 235
Q ss_pred cHHHHhcCCCCCEEEEcCccC
Q 025540 217 NCKELAAQPDVDGFLVGGASL 237 (251)
Q Consensus 217 n~~~l~~~~~vDG~LVG~asl 237 (251)
|+.+|+..+++||+++|..-|
T Consensus 160 ~~~eIa~~~gvd~l~iG~~DL 180 (267)
T 2vws_A 160 NLDEILDVEGIDGVFIGPADL 180 (267)
T ss_dssp THHHHHTSTTCCEEEECHHHH
T ss_pred HHHHHhCCCCCCEEEEChHHH
Confidence 899999999999999998643
No 337
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=20.84 E-value=95 Score=27.89 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCccccC-cceEEEccCCCc-ccHHHHhcCCCCCEEEEcCccCc
Q 025540 177 ATPAQAQEVHFELRKWLLANTSPEIAA-ATRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK 238 (251)
Q Consensus 177 a~~e~i~~~~~~IR~~l~~~~~~~~~~-~i~ilYGGSV~~-~n~~~l~~~~~vDG~LVG~asl~ 238 (251)
++.+.+.++.+..+..+.+. +. .+||+--|+|.. .++...+. .+.|++.+|++-+.
T Consensus 254 ~~~~~l~~v~~~~~~~~~~~-----~~~~ipvia~GGI~~~~dv~kala-lGA~~V~iG~~~l~ 311 (393)
T 2qr6_A 254 SMATAIADVAAARRDYLDET-----GGRYVHIIADGSIENSGDVVKAIA-CGADAVVLGSPLAR 311 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-----TSCCCEEEECSSCCSHHHHHHHHH-HTCSEEEECGGGGG
T ss_pred ChHHHHHHHHHHHHHhHhhc-----CCcceEEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHc
Confidence 45555666665544433221 12 389999999965 45555554 68999999998643
No 338
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=20.82 E-value=4.2e+02 Score=23.09 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=58.8
Q ss_pred HHHHHhCCCCEEEeCchhhccccc----cChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHh-cc
Q 025540 81 AEMLVNLEIPWVILGHSERRLILN----ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RV 155 (251)
Q Consensus 81 ~~mLkd~G~~~viiGHSERR~~f~----Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~-~i 155 (251)
..||+|+|++-+ ++|- ..-+++..-.++|.++|+ -+==.| |-..+-+.+=++.+|+ ++
T Consensus 174 iaml~dmG~~Sv--------KffPM~Gl~~leEl~avAkAca~~g~-~lEPTG--------GIdl~Nf~~I~~i~l~aGv 236 (275)
T 3m6y_A 174 IALVRDMGGNSL--------KYFPMKGLAHEEEYRAVAKACAEEGF-ALEPTG--------GIDKENFETIVRIALEANV 236 (275)
T ss_dssp HHHHHHHTCCEE--------EECCCTTTTTHHHHHHHHHHHHHHTC-EEEEBS--------SCCTTTHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCee--------eEeecCCcccHHHHHHHHHHHHHcCc-eECCCC--------CccHhHHHHHHHHHHHcCC
Confidence 579999998876 5553 445778888999999999 221122 3333333333444444 22
Q ss_pred CCCCCeE-EEEcccCccCCCCCCCHHHHHHHHHHHHHHHH
Q 025540 156 SSWSNIV-LAYEPVWAIGTGKVATPAQAQEVHFELRKWLL 194 (251)
Q Consensus 156 ~~~~~~i-IAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~ 194 (251)
+ +++ =-|--+=-=.||.|= ||++++..+.+++++.
T Consensus 237 ~---~viPHIYsSIIDk~TG~Tr-pedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 237 E---QVIPHVYSSIIDKETGNTK-VEAVRELLAVVKKLVD 272 (275)
T ss_dssp S---CBCCEECGGGBCTTTCCBC-HHHHHHHHHHHHHHHT
T ss_pred C---eecccccceeccCCCCCCC-HHHHHHHHHHHHHHHh
Confidence 2 221 125444344678764 9999999999998874
No 339
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=20.28 E-value=2.2e+02 Score=27.55 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=0.0
Q ss_pred HHHHHhCCCCEEEe----CchhhccccccChHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCCcHHHHHHHHHHHHhccC
Q 025540 81 AEMLVNLEIPWVIL----GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS 156 (251)
Q Consensus 81 ~~mLkd~G~~~vii----GHSERR~~f~Etd~~i~~Kv~~al~~gl~pIlCiGE~~~~r~~g~~~~~~~~Ql~~~l~~i~ 156 (251)
++.|.+.|++.+.| |||+. +-..++...+.--..-+..|..- |.+-...-+++..+.+.
T Consensus 286 ~~aLv~AGvD~iviD~ahGhs~~----------v~~~i~~ik~~~p~~~viaGNVa-------T~e~a~~Li~aGAD~vk 348 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGNSVY----------QIEFIKWIKQTYPKIDVIAGNVV-------TREQAAQLIAAGADGLR 348 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCCSHH----------HHHHHHHHHHHCTTSEEEEEEEC-------SHHHHHHHHHHTCSEEE
T ss_pred HHHHHhcCCcEEEEeccccccHH----------HHHHHHHHHhhCCcceEEecccc-------CHHHHHHHHHcCCCEEe
Q ss_pred --CCCCeEEEEcccCccCCCCCCCHHHHHHHHHHHHHHHHhcCCccccCcceEEEccCCCcccHHHHhcCCCCCEEEEcC
Q 025540 157 --SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGG 234 (251)
Q Consensus 157 --~~~~~iIAYEPvWAIGtG~~a~~e~i~~~~~~IR~~l~~~~~~~~~~~i~ilYGGSV~~~n~~~l~~~~~vDG~LVG~ 234 (251)
-..--+--=.-+..+|-+. ..-|-++.+..|+. .+||+--|+++..-....+--.+.|-+.+|+
T Consensus 349 VGiGpGSiCtTr~v~GvG~PQ---~tAi~~~a~~a~~~-----------~vpvIADGGI~~sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 349 IGMGSGSICITQEVMAVGRPQ---GTAVYAVAEFASRF-----------GIPCIADGGIGNIGHIAKALALGASAVMMGG 414 (556)
T ss_dssp ECSSCSTTBCCTTTCCSCCCH---HHHHHHHHHHHGGG-----------TCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred ecCCCCcccccccccCCCCcH---HHHHHHHHHHHHHc-----------CCCEEecCCcCcchHHHHHhhcCCCEEEEch
No 340
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=20.22 E-value=94 Score=25.77 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=26.8
Q ss_pred HHHhCCCCEEEeCchhhccccccChHHHHHHHHHHHHCCCe
Q 025540 83 MLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLK 123 (251)
Q Consensus 83 mLkd~G~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~gl~ 123 (251)
.+.+.|. ..++||.||-..+.+.. +.++.+.+.|+.
T Consensus 128 ~i~~~g~-~~vlaHp~r~~~~~~~~----~~l~~l~~~G~~ 163 (247)
T 2wje_A 128 KILMLGI-TPVIAHIERYDALENNE----KRVRELIDMGCY 163 (247)
T ss_dssp HHHTTTC-EEEETTGGGCGGGTTCH----HHHHHHHHTTCE
T ss_pred HHHHCCC-cEEEEehhhHHHHhhCH----HHHHHHHHCCCE
Confidence 3445554 77999999987776655 557778889987
No 341
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=20.21 E-value=1.4e+02 Score=25.29 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHCCCeEEEE
Q 025540 108 EFVGDKVAYALSQGLKVIAC 127 (251)
Q Consensus 108 ~~i~~Kv~~al~~gl~pIlC 127 (251)
+.+.+-+..|.+.|...|++
T Consensus 111 ~~~~~~i~~A~~lGa~~v~~ 130 (340)
T 2zds_A 111 AEIKDTARAAARLGVDTVIG 130 (340)
T ss_dssp HHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 44556667777777766554
No 342
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=20.01 E-value=2.1e+02 Score=25.04 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=26.0
Q ss_pred ccccccccHHHHHhCCCCEEEeCchhhcccc
Q 025540 73 GAFTGEISAEMLVNLEIPWVILGHSERRLIL 103 (251)
Q Consensus 73 Ga~TGeiS~~mLkd~G~~~viiGHSERR~~f 103 (251)
|.-|+..|.+.|+++|++.|+.|++-=|..+
T Consensus 212 ~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~ 242 (287)
T 3b8i_A 212 YGNPQLRDDARLARLGVRVVVNGHAAYFAAI 242 (287)
T ss_dssp TTCGGGCCHHHHHHTTEEEEECCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHcCCcEEEEChHHHHHHH
Confidence 3457889999999999999999999776543
Done!