BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025541
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 216 bits (551), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 149/228 (65%), Gaps = 15/228 (6%)
Query: 1 MSYYTPSCCSSP----PKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRR---R 53
MSY P+ P P +S+ S +LK+YQAFIFSVPI FTFI+L + Y+ YLRR
Sbjct: 1 MSYSDPNQNPIPETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTN 60
Query: 54 VDWSSLRMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQA 113
VDWSSL MR + +S AELGL K++REMLP+VIYKESF ++D+QCSVCL DYQA
Sbjct: 61 VDWSSLGMRGGTFVPTNNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQA 120
Query: 114 EDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVT 173
E+KLQQ+P+CGH FHM+CID WLT+HTTCPLCRLSL+ K S +LS E + S
Sbjct: 121 EEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLI--PKPSLDLSHQSTEIV---SSI 175
Query: 174 ENADGASDQQRSEAYEEPQAVEHS---ESRNEDGSTLQNGPKEQGRSS 218
EN++G + ++ +A+ H+ E N D + +E R+S
Sbjct: 176 ENSNGGEASTQPDSQSATEAISHTDDVEEGNRDSQEVSKETEENDRNS 223
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Query: 15 SSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEIS 74
+++ S ELK+YQAFIFSVPI FTFI+L LFYL YLRR D SSL MRT+ N +S
Sbjct: 13 AATSSPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRTTFIPGN--SLS 70
Query: 75 RAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDH 134
ELGL KELREMLPIV++KESF++ D+QCSVCL DYQ DKLQQIP C H FHMDCID
Sbjct: 71 TIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDL 130
Query: 135 WLTTHTTCPLCRLSLL 150
WLT+HTTCPLCRL+L+
Sbjct: 131 WLTSHTTCPLCRLALI 146
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 136/224 (60%), Gaps = 21/224 (9%)
Query: 1 MSYYTPSCCSSPPKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRR---RVDWS 57
MS+ P + P +S+ S LK FI VPI I+LL+ Y+ +RR VDWS
Sbjct: 1 MSFIDPR--TYIPSNSTESQILKF--TFIVCVPICVILIVLLVLYI--MRRNSNTNVDWS 54
Query: 58 SLRMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKL 117
SL + TNN +S AELGL K++REMLPIVIYKESF++ DTQCSVCL DYQAE+KL
Sbjct: 55 SLG--GFVPTNN--NLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKL 110
Query: 118 QQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENAD 177
QQ+P+CGH FHM+CID WLT+HTTCPLCRLSL+ D+ ++I+ S EN +
Sbjct: 111 QQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSV-----DLSHQSIEIVSSIENTN 165
Query: 178 GASDQQRSEAYEEPQAVEH---SESRNEDGSTLQNGPKEQGRSS 218
G + ++ +A+ H E N D + +E R+S
Sbjct: 166 GGEASTQPDSQSATEAIIHIDDVEEGNRDSIEVVKESEENDRNS 209
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
Query: 19 SAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSS----LRMRTSLHTNNVDEIS 74
+ +LK+YQAFIFS+PI F+ IL LLFYLFYL+RR SS + +S H + S
Sbjct: 16 AIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPS 75
Query: 75 RAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDH 134
L +K EL++ L +V++ E RD+ C VCL +++ +++L ++P C H FH+DCI
Sbjct: 76 VCLLDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHL 135
Query: 135 WLTTHTTCPLCRLSL 149
WL +H TCPLCR S+
Sbjct: 136 WLYSHNTCPLCRSSV 150
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 25/136 (18%)
Query: 34 IFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAEL--------------G 79
IFF +L L +YL+++R + SS + +N E S ++ G
Sbjct: 63 IFFICSILHLLVRYYLKKKRSNLSS----SPNESNQNPEFSDSDTYQRQLQQLFHLHDSG 118
Query: 80 LKKELREMLPIVIYKESFSIRDTQ----CSVCLADYQAEDKLQQIPACGHAFHMDCIDHW 135
L + L + LP+ +YKE I+ T+ C+VCL ++ +DKL+ +P C HAFH+DCID W
Sbjct: 119 LDQALIDALPVFLYKE---IKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTW 175
Query: 136 LTTHTTCPLCRLSLLA 151
L +++TCPLCR +L +
Sbjct: 176 LLSNSTCPLCRGTLFS 191
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 88 LPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRL 147
LPIV +++ +CS+CL++ DK + +P C H+FH++CID W +H+TCP+CR
Sbjct: 111 LPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRN 170
Query: 148 SLLAPAKASSELSDIQQETIQESSVTENADGASDQQRSEAYEEPQAV------EHSESRN 201
++L P +ASS+ + + + + T N A Q + + E P V + + N
Sbjct: 171 TVLGPEQASSKRVEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGN 230
Query: 202 EDGSTLQNGPKEQGRS 217
+ T ++G G S
Sbjct: 231 TNVGTQEDGAAGNGAS 246
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 79 GLKKELREMLPIVIYKESFSIRDT--QCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
G+ + + LP+ YK +++ C+VCL +++ EDKL+ +P C HAFHMDCID WL
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWL 166
Query: 137 TTHTTCPLCR 146
+H+TCPLCR
Sbjct: 167 LSHSTCPLCR 176
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 79 GLKKELREMLPIVIYKE--SFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
G+ + L + LP+ YK I C VCL +++ EDKL+ +P C HAFH++CID WL
Sbjct: 99 GVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158
Query: 137 TTHTTCPLCRLSLLAPAKASSELS 160
+H+TCPLCR +LL+ + LS
Sbjct: 159 LSHSTCPLCRSNLLSGFSSHHNLS 182
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 29 IFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISR----AELGLKKEL 84
+ + + F I ++F + RR +S + S + ++ R GL E
Sbjct: 52 VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111
Query: 85 REMLPIVIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHT 140
E P +Y E ++R +C+VCL +++ ++ L+ +P C H FH DC+D WL+ H+
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171
Query: 141 TCPLCRLSLL 150
TCPLCR L+
Sbjct: 172 TCPLCRADLV 181
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 11 SPPKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNV 70
SPP S L A S+ + +FI+L + + D ++ + L +
Sbjct: 5 SPPASG---VGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAA 61
Query: 71 DEISRAELGLKKELREMLPIVIYKESFSI---RDTQCSVCLADYQAEDKLQQIPACGHAF 127
+ +LGL + + E P ++ +S + + CS+CL DY+A + ++ IP C H F
Sbjct: 62 E----VKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCF 117
Query: 128 HMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQ 168
H DC+D WL T TCPLCR S AP++ ++ LSD+ Q
Sbjct: 118 HTDCVDEWLRTSATCPLCRNS-PAPSRLATPLSDLVPLAFQ 157
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 74 SRAELGLKKELREMLPIVIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHM 129
SRA GL+KE+ E P +Y E ++ +C++CL++++ ++ L+ +P C H FH
Sbjct: 89 SRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHA 148
Query: 130 DCIDHWLTTHTTCPLCRLSL-LAPAKASSELS-DIQQETIQESSVTENADGASDQQRSEA 187
+CID WL++ +TCP+CR +L L P ++ L+ D++ +Q+ + G S RS +
Sbjct: 149 NCIDVWLSSWSTCPVCRANLSLKPGESYPYLNMDVETGGVQKLPNERSLTGNSVTTRSRS 208
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 18/113 (15%)
Query: 79 GLKKELREMLPIVIYKESFSIRDT-----------QCSVCLADYQAEDKLQQIPACGHAF 127
GL + + LP+ YKE C+VCL ++ +DKL+ +P C HAF
Sbjct: 107 GLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAF 166
Query: 128 HMDCIDHWLTTHTTCPLCRLSLLAPAKASS----ELSDIQQETIQESSVTENA 176
H++CID WL +++TCPLCR +L +P + + DI+++ E VTEN
Sbjct: 167 HLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIRED---EEGVTENG 216
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 29 IFSVPIFFTFILLLL-FYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAELGLKKELREM 87
+F+V + F+ LL Y+ + R D S+ R N ++ S GL + E
Sbjct: 49 VFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFR-----NRANDGSSRRGGLDNAVVES 103
Query: 88 LPIVIY---KES-FSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCP 143
P+ Y KES +D +C++CL + + + ++ +P C H FH+DCID WL +H TCP
Sbjct: 104 FPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCP 163
Query: 144 LCRLSLLAPA-KASSELSDIQQETIQESSVT--ENADGASDQQR------SEAYEEPQAV 194
+CR +L A + K E + +++ V E + A R S + +
Sbjct: 164 VCRSNLTAKSNKPGDEDDGVPLAAMRDHVVVDIETVEVAKSHHRRLSSEISGKFPRSNST 223
Query: 195 EHSESRNEDGS 205
HS R DG+
Sbjct: 224 GHSMDRFSDGT 234
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 74 SRAELGLKKELREMLPIVIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHM 129
SRA GL+KEL E PI +Y E ++ +C++CL+++ ++ L+ +P C H FH
Sbjct: 89 SRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHA 148
Query: 130 DCIDHWLTTHTTCPLCRLSL-LAPAKA 155
+CID WL++ +TCP CR +L L P ++
Sbjct: 149 NCIDVWLSSQSTCPACRANLSLKPGES 175
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 70 VDEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHM 129
VD + G+KK +++P+ Y ++ T+C +CL D+ + ++ +P C H FH+
Sbjct: 79 VDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHV 138
Query: 130 DCIDHWLTTHTTCPLCRLSLL---APAKASSELSDI 162
CID WL +H++CP CR SLL PA S D+
Sbjct: 139 KCIDTWLLSHSSCPTCRQSLLEHQTPANGSRRGDDV 174
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 80 LKKELREMLPIVIY---KESFSIRDT--QCSVCLADYQAEDKLQQIPACGHAFHMDCIDH 134
L KE+ E P +Y K + + +C+VCLA++ D+L+ +PAC H FH DCID
Sbjct: 104 LDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDP 163
Query: 135 WLTTHTTCPLCRLSLLAP--AKASSELSDI 162
WL TCPLCR +L AP + A++E SD+
Sbjct: 164 WLAAAVTCPLCRANLTAPPVSLAAAESSDL 193
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 79 GLKKELREMLPIVIYKESFSIRDT--QCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
G+KK+ +MLP+V Y ++ +C +CL+D+ A ++L+ +P C H FH+ CID WL
Sbjct: 103 GIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWL 162
Query: 137 TTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENAD 177
T H TCP CR L+ + LSD ++ TE+ D
Sbjct: 163 TQHMTCPKCRHCLVDTCQ--KVLSDCDAADQVAATATESID 201
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 28 FIFSVPIFFTFILLLLFYLF------------YLRRRRVDWSSLRMRTSLHTNNVDEISR 75
FI V +FF + F F R R S R+ TS+ + R
Sbjct: 55 FILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRR 114
Query: 76 AELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHW 135
GL + LP+ Y ++ R+ C +CL+D++ + ++ IP CGH FH+DC+D W
Sbjct: 115 ---GLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171
Query: 136 LTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENAD 177
L+++ TCPLCR + L K Q++ +E + D
Sbjct: 172 LSSYVTCPLCRSNQLFSDKDLGMQEPPDQDSAEEHDTCDGVD 213
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 13 PKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLR----RRRVDWSSLRMRTS---- 64
P++SS + I + I T LL+ +Y+F ++ ++D R R+S
Sbjct: 32 PRTSSSGTNFPILA--IAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNP 89
Query: 65 LHTNNVDEISRAELGLKKELREMLPIVIYK--------ESFSIRDTQCSVCLADYQAEDK 116
L + E++R GL + +P+ +K E S +CSVCL ++Q ++K
Sbjct: 90 LMIYSPHEVNR---GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146
Query: 117 LQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSEL 159
L+ IP C H FH+DCID WL + CPLCR S+ A + +L
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDL 189
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 78 LGLKKELREMLPIVIYKESFSIRD-TQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
+GL + + +V +K+ I D T+CSVCL +++ ++ L+ +P C HAFH++CID WL
Sbjct: 108 VGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
Query: 137 TTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENADGASDQQRS 185
+H CPLCR +L + + ++ + ESS + G D RS
Sbjct: 168 LSHKNCPLCRAPVLLITEPPHQETETNHQPDSESS--NDLRGRQDSSRS 214
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 23/164 (14%)
Query: 90 IVIYK----ESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLC 145
I +YK + F + + CSVCL+++Q + L+ +P C HAFH+ CID WL +H+ CPLC
Sbjct: 142 ITVYKYRKMDGF-VESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLC 200
Query: 146 RLSLLAPAKASSELSDIQQETI----------QESSVTENADGASDQQRSEAYEE---PQ 192
R ++ ++ E+ D+ + I +S V N D + + R+E E P+
Sbjct: 201 RAFIV--TSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPK 258
Query: 193 AVEHSESRNEDGSTLQNGPKEQGRSSHSL-DHEREVRDTTNETG 235
E +SR DG ++ G S+ D RE+ D G
Sbjct: 259 PPEMQDSR--DGEERRSASLNSGGGVVSIADILREIEDDEESAG 300
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 4 YTPSCCSSPPKSSSVSAELKVYQAFI---FSVPIFFTFILLLLFYLFYLR-RRRVDWSSL 59
Y + PP + S K A I FS+ TF+LL+ F+ R D
Sbjct: 19 YVSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGE 78
Query: 60 RMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIRDT-QCSVCLADYQAEDKLQ 118
R+R + S GL K+ E LP + ++ +CSVCL+ ++ + L+
Sbjct: 79 RIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILR 138
Query: 119 QIPACGHAFHMDCIDHWLTTHTTCPLCR--------LSLLAPAKASSELSDIQQETIQES 170
+P C HAFH+ CID WL H TCPLCR LS+L + S + + Q ET +E
Sbjct: 139 LLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILN-QSETREED 197
Query: 171 SVTE 174
S E
Sbjct: 198 SRLE 201
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 74 SRAELGLKKELREMLPIVIYKE--SFSIRD--TQCSVCLADYQAEDKLQQIPACGHAFHM 129
SR G+ K++ E P +Y E +F I + +C++CL +++ E+ L+ +P C H FH
Sbjct: 86 SRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHA 145
Query: 130 DCIDHWLTTHTTCPLCRLSL 149
+CID WL++ +TCP+CR +L
Sbjct: 146 NCIDEWLSSRSTCPVCRANL 165
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 38 FILLLLFYLFY------LRRRRVDWSSLRMRTSLHTNNVDEISRA-ELGLKKELREMLPI 90
I+++L +F+ + RR +L M + N + + E GL + E P
Sbjct: 41 IIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPT 100
Query: 91 VIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCR 146
Y ++R +C VCL +++ ++ L+ IP C H FH CID WL + TTCPLCR
Sbjct: 101 FPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR 160
Query: 147 LSLL-APAKA-SSELSDIQQETIQES 170
+L+ P ++ SSE+ + +ET Q S
Sbjct: 161 ANLVPVPGESVSSEIPGLARETGQNS 186
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 71 DEISRAELGLKKELREMLPIVIYKE---SFSIRD-----TQCSVCLADYQAEDKLQQIPA 122
D + LGL +E+ + P + Y+E S+S++ + CS+CLADY+ D ++ +P
Sbjct: 88 DTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPD 147
Query: 123 CGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDI 162
C H FH +C+D WL H TCP+CR S L P+ A + ++D+
Sbjct: 148 CNHLFHDNCVDPWLRLHPTCPVCRTSPL-PSPAMTPVADV 186
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 76 AELGLKKELREMLPIVIYKESF-SIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDH 134
A GLKK+ + +P+ +Y ++ T+C +CL D++ +K++ +P C H FH+ CID
Sbjct: 85 AATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 144
Query: 135 WLTTHTTCPLCRLSLL 150
WL + ++CP CR SLL
Sbjct: 145 WLLSRSSCPTCRQSLL 160
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 80 LKKELREMLPIVIYKESFSIRD--TQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLT 137
+ + + LP++ YK +R + C+VCL ++ AED+L+ +P C HAFH++CID WL
Sbjct: 96 IDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 138 THTTCPLCR 146
T++TCPLCR
Sbjct: 156 TNSTCPLCR 164
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 28 FIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAEL-GLKKELRE 86
I V +FF L F+ Y+RR + N +R + GL + E
Sbjct: 67 MIVLVSVFF----FLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIE 122
Query: 87 MLPIVIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTC 142
P Y ++R +CSVCL +++ ++ L+ IP C H FH CID WL +HTTC
Sbjct: 123 TFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTC 182
Query: 143 PLCRLSLLAPAKASSELSDIQQETIQESSVTENADGASDQQRSEAYEEPQAVE 195
PLCR L+ P S +S IQ + + +G D+ RS + + +E
Sbjct: 183 PLCRADLI-PVPGESIVS-IQIPGLVNDPPGSDPNG--DRIRSLGSPDARLIE 231
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 41 LLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIR 100
L L+Y +YL R SS RT+ + + S GL + + LPI + ++
Sbjct: 18 LHLYYRWYLLR-----SSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTALF 72
Query: 101 DTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELS 160
+CSVCL++++ + + +P C H FH+ CID W +H++CPLCR + A
Sbjct: 73 AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSM 132
Query: 161 D-----IQQETIQESSVTENADGASDQQRSEAYEEPQAVEHSE 198
D I +++ E + D ++ +P A+E S+
Sbjct: 133 DEVAISISDPVYGDTNHHEGTETTGDSVPEDSQRKPAAIEISQ 175
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 79 GLKKELREMLPIVIYKES-FSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLT 137
GLKK + P+ Y I T+C++CL ++ ++++ +P C H+FHM CID WL
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
Query: 138 THTTCPLCRLSLLAPAKASSE 158
+H++CP CR SL+ A SE
Sbjct: 139 SHSSCPNCRHSLIEVHVAGSE 159
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 93 YKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAP 152
++ F I T CS+CL ++ ++ L+ +P C H FH+ CID WL +H+ CPLCR ++ P
Sbjct: 144 HQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVP 203
Query: 153 AKASSELSDIQQETIQESSVTENADG--ASDQQRSEA 187
E + + +S +A+G D R E
Sbjct: 204 TTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDHREEV 240
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 81 KKELREMLPIV----IYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
+ + + LPI + + S S+ C+VCL+ ++ ED+L+ +P C HAFH DCID WL
Sbjct: 90 RSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL 149
Query: 137 TTHTTCPLCRLSLLA 151
++ TCPLCR L A
Sbjct: 150 VSNQTCPLCRSPLFA 164
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 73 ISRAELGLKKELREMLPIVIY--KESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMD 130
++ A GLKK++ + LP + + + S + +C++CLA++ A D+L+ +P CGH FH+
Sbjct: 78 VAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVA 137
Query: 131 CIDHWLTTHTTCPLCR 146
CID WL +H++CP CR
Sbjct: 138 CIDTWLGSHSSCPSCR 153
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 79 GLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTT 138
GL ++ + + +V++K + +C+VCL+D DK + +P C H FH+DCID W +
Sbjct: 95 GLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQS 154
Query: 139 HTTCPLCR 146
H+TCPLCR
Sbjct: 155 HSTCPLCR 162
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 79 GLKKELREMLPIVIYKESFS-IRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLT 137
GL++ + + I YK I T C VCL +++ ++ L+ +P C HAFH+ CID WL+
Sbjct: 151 GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLS 210
Query: 138 THTTCPLCRLSL 149
+HT CPLCR +
Sbjct: 211 SHTNCPLCRAGI 222
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 79 GLKKELREMLPIVIYKESFSI--RDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
G+KK+ M P+V Y ++ D +C +CL+D+ + ++L+ +P C H FH+ CID WL
Sbjct: 108 GIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
Query: 137 TTHTTCPLCRLSLL 150
H TCP CR L+
Sbjct: 168 QQHLTCPKCRNCLV 181
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 13 PKSSSVSAELKVYQAFIFSVP-IFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVD 71
P S+ K+ A + S+ + L L+ F LRRRR + L + + + +
Sbjct: 20 PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPV---IFRHPFE 76
Query: 72 EISRAELGLKKELREMLPI--VIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHM 129
R GL + LP V + + T+C+VCL+ + +DK +++P C H FH+
Sbjct: 77 MPKR---GLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHV 133
Query: 130 DCIDHWLTTHTTCPLCR 146
DC+D WLTT +TCP+CR
Sbjct: 134 DCVDTWLTTCSTCPVCR 150
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 75 RAELGLKKELREMLPIVIYKESFSIR----DTQCSVCLADYQAEDKLQQIPACGHAFHMD 130
R GL K++ P +Y + ++ +C++CL +++ E+ L+ +P C HAFH
Sbjct: 95 RTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHAS 154
Query: 131 CIDHWLTTHTTCPLCRLSLLAPAKASSE 158
CID WL++ +TCP+CR SL P K S+
Sbjct: 155 CIDVWLSSRSTCPVCRASL--PPKPGSD 180
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 79 GLKKELREMLPIVIYKESFSIRDT--QCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
G+KK+ M P+V Y ++ +C +CL+D+ + ++L+ +P C H FH+ CID WL
Sbjct: 108 GIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
Query: 137 TTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENA 176
H TCP CR L+ + L D Q S+ TE+
Sbjct: 168 QHHLTCPKCRHCLVETCQKI--LGDFSQADSMASTPTESV 205
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 32 VPIFFTFILLLLFYLFYLR----RRRVDWSSLRMRTSLHTNNVDE--ISRAEL---GLKK 82
+ I T LL+ +Y+F ++ R+D + N+ D + EL GL +
Sbjct: 42 IGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPELRSRGLDE 101
Query: 83 ELREMLPIVIYKESFSIRDT---------------QCSVCLADYQAEDKLQQIPACGHAF 127
+ +PI +K+ + D +CSVCL+++Q E+KL+ IP C H F
Sbjct: 102 SVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLF 161
Query: 128 HMDCIDHWLTTHTTCPLCR 146
H+DCID WL + CPLCR
Sbjct: 162 HIDCIDVWLQNNANCPLCR 180
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 79 GLKKELREMLPIVIYKE-SFSI-RDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWL 136
GL + + LP+ +Y + S+ + C+VCL ++ DKL+ +P C HAFH+ CID WL
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL 239
Query: 137 TTHTTCPLCRLSL 149
+++TCPLCR SL
Sbjct: 240 LSNSTCPLCRRSL 252
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 73 ISRAELGLKKELREMLPIVIYKESFSIRD-TQCSVCLADYQAEDKLQQIPACGHAFHMDC 131
IS GL + + + + + YK D + CSVCL++++ + L+ +P C HAFH+ C
Sbjct: 110 ISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPC 169
Query: 132 IDHWLTTHTTCPLCR 146
ID WL +H+ CPLCR
Sbjct: 170 IDTWLKSHSNCPLCR 184
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 76 AELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHW 135
A GL + + LP+ + + +C+VCL++++ + + +P C H FH+DCID W
Sbjct: 91 ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 136 LTTHTTCPLCRLSLLAPAKASSELSDIQQETI--------------QESSVTENADGASD 181
+H+TCPLCR + + A S + ++E + S +T+ G+
Sbjct: 151 FHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDEPHGSGS 210
Query: 182 QQ--RSEAYEEPQAVE---HSESRNEDGSTLQNGPKEQ 214
Q R ++ +P A+E + S ED T ++ P Q
Sbjct: 211 SQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQ 248
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 73 ISRAELGLKKELREMLPIVIYKESFSIRD--TQCSVCLADYQAEDKLQQIPACGHAFHMD 130
++ A GLKK++ LP + Y + +C++CL ++ A D+L+ +P CGH FH+
Sbjct: 71 VAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVS 130
Query: 131 CIDHWLTTHTTCPLCR 146
CID WL +H++CP CR
Sbjct: 131 CIDTWLGSHSSCPSCR 146
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 25 YQAFIFSVPIFFTFILLLLFYLFY-LRRRRVDWSSLRMRTSLHTNNVDEISRAEL-GLKK 82
Y F SV F + +++FY RR R + R + L + I R +L LK+
Sbjct: 206 YSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQ 265
Query: 83 ELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTC 142
RE+ P C+VC+ Y+ D L +I C H FH C+D WL H TC
Sbjct: 266 GDREIGP----------DGDSCAVCIELYKPND-LVRILTCNHIFHKTCVDPWLLEHRTC 314
Query: 143 PLCRLSLLAPAKASSELSD--IQQETIQESSVTENADGASDQQRSE----------AYEE 190
P+C+ +L ++ D + + + ++ +A + RSE +E
Sbjct: 315 PMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYASVQGADE 374
Query: 191 PQAVEHSESRNED 203
P EH +S NE+
Sbjct: 375 PPLEEHVQSTNEN 387
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 75 RAELGLKKELREMLPIVIYKESFSIRDT-QCSVCLADYQAEDKLQQIPACGHAFHMDCID 133
R G+ + + E LP+ + +D +C+VCLA ++ + L+ +P C HAFH++C+D
Sbjct: 116 RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 175
Query: 134 HWLTTHTTCPLCR 146
WL H+TCPLCR
Sbjct: 176 TWLDAHSTCPLCR 188
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 74 SRAELGLKKELREMLPIVIYKESFSIRDTQ--CSVCLADYQAEDKLQQIPACGHAFHMDC 131
+R + GL + +P+ +Y+E+ D + C +CL ++A D +++ CGH FH++C
Sbjct: 106 TRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVEC 165
Query: 132 IDHWLTTHTTCPLCRLSLLAPAKASSEL----SDIQQET---IQESSVTENADGASDQQR 184
ID WL++H+TCPLCR +LA L + +++E +Q S EN S +R
Sbjct: 166 IDMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAEVRLQMSPAGENESNVSGDRR 225
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 79 GLKKELREMLPIVIYKESFSIRDTQC-SVCLADYQAEDKLQQIPACGHAFHMDCIDHWLT 137
GL ++ + P ++Y E+ C ++CL DY+ + L+Q+P C H FH+ CID WL
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 138 THTTCPLCRLSLLAPAKASSELSDI 162
+ TCP+CR S L P S+ L+++
Sbjct: 181 LNPTCPVCRTSPL-PTPLSTPLAEV 204
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 31 SVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAELGLKKELREMLPI 90
SV + F ++++L + Y R + R S + L + + + +PI
Sbjct: 32 SVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVLDKIPI 91
Query: 91 VIY---KESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRL 147
+Y +CSVCL++++ ED+ + +P CGH+FH+DCID W + +TCPLCR
Sbjct: 92 FVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRA 151
Query: 148 SLLAP 152
+ P
Sbjct: 152 PVQPP 156
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 79 GLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTT 138
GL KE + L + + E+ +++ CSVC+ +Y +KL+++P C H +H+ CID WL+
Sbjct: 547 GLTKEQIDNLAMRSFGENDALK--TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSE 603
Query: 139 HTTCPLCRLSLLAPAKASS 157
++TCP+CR ++LA S
Sbjct: 604 NSTCPICRRAVLASGNRES 622
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,369,868
Number of Sequences: 539616
Number of extensions: 3362015
Number of successful extensions: 14390
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 13801
Number of HSP's gapped (non-prelim): 757
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)