Citrus Sinensis ID: 025541

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
MSYYTPSCCSSPPKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENADGASDQQRSEAYEEPQAVEHSESRNEDGSTLQNGPKEQGRSSHSLDHEREVRDTTNETGEHEQSRRIPDLTLKSP
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccccHHHHHHcccEEEEccccccccccEEEccccccccEEEcccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
********************ELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVD**********************LGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLA*********************************************************************************************D******
xxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MSYYTPSCCSSPPKSSSVSAELKVYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWSSLRMRTSLHTNNVDEISRAELGLKKELREMLPIVIYKESFSIRDTQCSVCLADYQAEDKLQQIPACGHAFHMDCIDHWLTTHTTCPLCRLSLLAPAKASSELSDIQQETIQESSVTENADGASDQQRSEAYEEPQAVEHSESRNEDGSTLQNGPKEQGRSSHSLDHEREVRDTTNETGEHEQSRRIPDLTLKSP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
RING-H2 finger protein ATL7 probableQ9SN28

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2L0B, chain A
Confidence level:very confident
Coverage over the Query: 73-151
View the alignment between query and template
View the model in PyMOL
Template: 2JWA, chain A
Confidence level:probable
Coverage over the Query: 24-53
View the alignment between query and template
View the model in PyMOL