BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025542
         (251 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q59KI4|INO80_CANAL Putative DNA helicase INO80 OS=Candida albicans (strain SC5314 / ATCC
            MYA-2876) GN=INO80 PE=3 SV=1
          Length = 1387

 Score = 31.6 bits (70), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 131  ELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTALGGHIFLLPY 190
            E Y ++  L +P F+Y +I + ++++F+     +      ++  L      GGH  L+ +
Sbjct: 1205 EQYPKSNMLPMPIFDYSNIRMPSMDRFIAESGKL-----AKLDELLIDLKRGGHRILIYF 1259

Query: 191  -LLRISLICRTYLKLPWKPLISIDGSTVYELNDEL 224
             + R+  I   YL       I +DGST  E   E+
Sbjct: 1260 QMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294


>sp|P35144|TPIS_BACMD Triosephosphate isomerase OS=Bacillus megaterium (strain DSM 319)
           GN=tpiA PE=3 SV=1
          Length = 251

 Score = 31.2 bits (69), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 5   HWFGQTHQSVNRRSILGSIHGVK--CCSGTVNDGNKNTNNKTATPQILKFAVSGVTE 59
             F +T ++VN+++I    HG+    C G  N+  +    KT     ++ A++G+T+
Sbjct: 100 EMFAETDETVNQKTIAAFKHGLTPIVCCGETNEEYEQDQTKTVVANQVQKALAGLTD 156


>sp|Q751J3|ATM_ASHGO Serine/threonine-protein kinase TEL1 OS=Ashbya gossypii (strain ATCC
            10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TEL1
            PE=3 SV=1
          Length = 2768

 Score = 31.2 bits (69), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 106  TGIFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYP 147
            T +F + IY +D + +   +  R   LYS  L  L PF  +P
Sbjct: 1401 TSLFENTIYHDDSLLDTELLDHRALNLYSEILSFLPPFTGFP 1442


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.140    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,432,675
Number of Sequences: 539616
Number of extensions: 3765015
Number of successful extensions: 7933
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7927
Number of HSP's gapped (non-prelim): 18
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)