Query 025542
Match_columns 251
No_of_seqs 135 out of 328
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 12:27:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rga_A Epoxide hydrolase; NTF2 99.5 6.1E-13 2.1E-17 119.4 13.9 118 87-237 136-275 (283)
2 2a15_A Hypothetical protein RV 99.5 1.5E-12 5.2E-17 101.7 13.6 120 89-244 7-137 (139)
3 3dxo_A Uncharacterized snoal-l 99.4 1.1E-12 3.9E-17 102.8 11.1 111 88-236 5-119 (121)
4 4h3u_A Hypothetical protein; s 99.4 3.7E-12 1.3E-16 102.9 12.6 109 105-248 39-151 (158)
5 2gex_A SNOL; alpha+beta barrel 99.4 1E-11 3.4E-16 99.3 14.7 117 88-237 3-127 (152)
6 3rga_A Epoxide hydrolase; NTF2 99.4 2.3E-12 7.8E-17 115.6 11.6 115 87-236 4-125 (283)
7 3hk4_A MLR7391 protein; NTF2-l 99.3 2E-11 6.9E-16 99.0 11.5 112 84-233 18-136 (136)
8 2gey_A ACLR protein; alpha+bet 99.3 6.8E-11 2.3E-15 95.4 14.0 115 88-237 3-125 (158)
9 2f99_A Aklanonic acid methyl e 99.3 3E-11 1E-15 97.3 11.7 119 90-244 12-141 (153)
10 3k0z_A Putative polyketide cyc 99.3 2.7E-11 9.2E-16 98.8 11.5 117 89-244 34-153 (159)
11 3f9s_A Putative polyketide cyc 99.3 4.1E-11 1.4E-15 94.7 12.0 113 92-237 9-134 (146)
12 3fh1_A Uncharacterized NTF2-li 99.3 6.2E-11 2.1E-15 92.4 12.2 110 84-234 12-128 (129)
13 3mso_A Steroid delta-isomerase 99.2 1.7E-10 5.9E-15 93.5 14.4 116 89-244 9-129 (143)
14 1oh0_A Steroid delta-isomerase 99.2 9.7E-11 3.3E-15 89.6 11.9 116 87-238 5-125 (131)
15 1ohp_A Steroid delta-isomerase 99.2 2E-10 7E-15 85.7 12.9 112 88-237 4-120 (125)
16 3ec9_A Uncharacterized NTF2-li 99.2 1.3E-10 4.5E-15 91.0 12.1 118 92-247 15-140 (140)
17 1sjw_A Nogalonic acid methyl e 99.2 1.1E-10 3.9E-15 91.3 11.4 111 93-237 6-127 (144)
18 3ehc_A Snoal-like polyketide c 99.2 7E-11 2.4E-15 91.6 9.9 115 91-244 5-127 (128)
19 3kkg_A Putative snoal-like pol 99.2 1.9E-10 6.6E-15 91.0 12.0 118 92-244 12-140 (146)
20 3fgy_A Uncharacterized NTF2-li 99.2 5.1E-11 1.8E-15 92.3 8.5 121 89-247 5-132 (135)
21 3dm8_A Uncharacterized protein 99.2 1.6E-10 5.4E-15 92.2 10.5 119 90-245 5-133 (143)
22 3ebt_A Uncharacterized NTF2-li 99.2 2.7E-10 9.2E-15 87.7 10.8 112 92-239 6-127 (132)
23 3h3h_A Uncharacterized snoal-l 99.1 2.1E-10 7.2E-15 88.6 9.6 107 85-234 4-121 (122)
24 3i0y_A Putative polyketide cyc 99.1 7.1E-10 2.4E-14 86.1 12.0 118 92-244 11-138 (140)
25 1z1s_A Hypothetical protein PA 99.1 2.3E-10 7.9E-15 93.1 8.4 112 92-237 26-145 (163)
26 3f7x_A Putative polyketide cyc 99.1 1.5E-09 5.2E-14 87.7 12.8 117 93-244 24-150 (151)
27 3f8x_A Putative delta-5-3-keto 99.0 5.6E-09 1.9E-13 86.0 14.0 110 92-243 23-137 (148)
28 3er7_A Uncharacterized NTF2-li 99.0 2.8E-09 9.6E-14 86.4 10.2 103 109-244 27-129 (131)
29 1nww_A Limonene-1,2-epoxide hy 99.0 8.8E-09 3E-13 81.1 12.8 114 89-238 22-139 (149)
30 3f8h_A Putative polyketide cyc 99.0 4.1E-09 1.4E-13 85.2 11.2 116 94-244 23-148 (150)
31 1s5a_A Hypothetical protein YE 99.0 3.5E-09 1.2E-13 82.8 9.6 114 91-237 12-133 (150)
32 3grd_A Uncharacterized NTF2-su 98.9 2E-09 6.9E-14 83.3 7.1 115 92-239 7-129 (134)
33 3g8z_A Protein of unknown func 98.9 1E-08 3.6E-13 82.2 11.1 111 92-237 23-140 (148)
34 2bng_A MB2760; epoxide hydrola 98.9 2E-08 6.9E-13 79.7 12.6 123 90-250 16-146 (149)
35 1tuh_A BAL32A, hypothetical pr 98.8 4.4E-08 1.5E-12 78.3 12.5 113 88-237 28-149 (156)
36 3g16_A Uncharacterized protein 98.8 2.7E-08 9.3E-13 83.3 11.4 120 84-240 5-131 (156)
37 3jum_A Phenazine biosynthesis 98.7 4.7E-07 1.6E-11 77.9 13.8 99 109-237 60-166 (185)
38 2k54_A Protein ATU0742; protei 98.6 4.1E-07 1.4E-11 69.6 10.6 107 93-237 7-117 (123)
39 3hx8_A MLR2180 protein, putati 98.6 2.9E-06 9.9E-11 64.0 14.8 119 88-237 4-127 (129)
40 3dmc_A NTF2-like protein; stru 98.5 3.1E-06 1E-10 67.2 13.0 112 88-236 11-130 (134)
41 3en8_A Uncharacterized NTF-2 l 98.4 2.9E-06 9.8E-11 66.9 11.1 104 88-235 4-112 (128)
42 3g0k_A Putative membrane prote 98.4 5.6E-06 1.9E-10 67.0 12.8 108 89-235 27-136 (148)
43 3ff0_A Phenazine biosynthesis 98.4 1E-05 3.6E-10 68.3 14.2 99 109-237 38-144 (163)
44 3f14_A Uncharacterized NTF2-li 98.2 2.2E-05 7.6E-10 59.8 12.4 104 93-232 4-110 (112)
45 3flj_A Uncharacterized protein 98.2 1.8E-05 6E-10 66.2 11.7 99 105-243 32-135 (155)
46 3ff2_A Uncharacterized cystati 98.1 1E-05 3.4E-10 61.5 8.6 108 86-230 2-114 (117)
47 3h51_A Putative calcium/calmod 97.9 0.00055 1.9E-08 54.5 14.3 112 91-233 21-139 (156)
48 3ke7_A Putative ketosteroid is 97.8 0.00069 2.4E-08 54.8 13.7 98 105-235 28-129 (134)
49 3d9r_A Ketosteroid isomerase-l 97.7 0.0014 4.9E-08 49.5 13.5 114 89-234 11-131 (135)
50 3f40_A Uncharacterized NTF2-li 97.6 0.00032 1.1E-08 54.2 8.8 99 94-238 11-111 (114)
51 3f7s_A Uncharacterized NTF2-li 97.5 0.0023 7.9E-08 49.6 12.4 63 92-155 10-77 (142)
52 2ux0_A Calcium-calmodulin depe 97.5 0.0017 5.7E-08 50.5 11.5 65 90-156 14-84 (143)
53 3gzb_A Putative snoal-like pol 97.4 0.0018 6.2E-08 53.7 11.5 113 93-236 23-145 (154)
54 2gxf_A Hypothetical protein YY 97.4 0.0012 4E-08 51.7 9.9 106 105-240 17-129 (142)
55 3rob_A Uncharacterized conserv 97.3 0.0047 1.6E-07 49.5 13.1 113 89-232 16-133 (139)
56 3bb9_A Putative orphan protein 97.3 0.0024 8.3E-08 50.3 10.6 51 105-155 44-97 (148)
57 3gwr_A Putative calcium/calmod 96.8 0.02 6.8E-07 45.9 12.2 66 86-156 8-78 (144)
58 3cu3_A Domain of unknown funct 96.3 0.068 2.3E-06 42.9 11.9 51 92-143 18-71 (172)
59 3lyg_A NTF2-like protein of un 96.2 0.048 1.6E-06 44.0 10.6 112 86-239 2-117 (120)
60 2rfr_A Uncharacterized protein 96.0 0.1 3.5E-06 40.4 11.5 48 92-140 21-71 (155)
61 3gzr_A Uncharacterized protein 95.7 0.26 9E-06 39.2 12.9 59 91-150 7-69 (146)
62 2chc_A Protein RV3472; hypothe 95.5 0.26 8.9E-06 39.1 12.2 51 92-143 16-68 (170)
63 3b8l_A Uncharacterized protein 95.0 0.3 1E-05 38.5 11.1 49 92-141 30-84 (163)
64 1tp6_A Hypothetical protein PA 94.8 0.28 9.4E-06 38.3 10.2 48 109-156 31-78 (128)
65 3soy_A NTF2-like superfamily p 94.7 0.23 7.7E-06 39.5 9.6 33 105-137 24-60 (145)
66 3cnx_A Uncharacterized protein 94.6 0.37 1.3E-05 40.2 11.1 69 86-156 9-97 (170)
67 2r4i_A Uncharacterized protein 94.6 0.42 1.4E-05 35.0 10.3 50 105-156 20-71 (123)
68 3a76_A Gamma-hexachlorocyclohe 93.9 0.45 1.5E-05 38.5 9.9 48 92-140 33-84 (176)
69 3ef8_A Putative scyalone dehyd 93.7 1.1 3.7E-05 35.1 11.6 50 92-142 13-65 (150)
70 4i4k_A Uncharacterized protein 93.7 0.69 2.4E-05 36.2 10.4 52 92-144 21-74 (143)
71 3fsd_A NTF2-like protein of un 93.4 0.83 2.9E-05 35.0 10.3 50 105-156 28-79 (134)
72 3ecf_A NTF2-like protein; stru 93.3 0.75 2.5E-05 37.2 9.9 59 86-146 2-62 (130)
73 2f86_B Hypothetical protein K1 90.6 3 0.0001 33.2 10.7 49 105-155 26-79 (143)
74 2rgq_A Domain of unknown funct 90.4 4.9 0.00017 30.9 13.1 50 92-142 12-63 (144)
75 3b7c_A Uncharacterized protein 89.2 2.6 9E-05 31.6 8.9 38 105-142 19-60 (122)
76 3ejv_A Uncharacterized protein 87.5 3.2 0.00011 34.0 9.0 53 89-142 25-88 (179)
77 3mg1_A OCP, orange carotenoid 81.4 21 0.00073 33.0 12.3 102 95-231 198-303 (323)
78 4gb5_A Uncharacterized protein 55.7 67 0.0023 24.6 13.3 53 91-144 12-72 (159)
79 2rcd_A Uncharacterized protein 49.9 33 0.0011 25.5 5.7 50 104-155 27-80 (129)
80 1idp_A Scytalone dehydratase; 39.8 1.1E+02 0.0039 25.0 7.9 46 92-138 19-71 (172)
81 1gy7_A Nuclear transport facto 36.3 72 0.0025 24.5 5.8 66 87-155 4-70 (125)
82 1zo2_A NTF2, nuclear transport 26.1 2.1E+02 0.0071 22.0 6.9 66 87-155 10-76 (129)
83 1njh_A Protein YOJF; structura 25.9 95 0.0032 24.8 4.8 25 199-226 71-95 (119)
84 2qiy_A UBP3-associated protein 25.1 1E+02 0.0035 24.5 5.0 67 87-155 10-93 (154)
85 1gy6_A Nuclear transport facto 22.8 1.4E+02 0.0048 22.9 5.3 64 88-155 7-72 (127)
86 2owp_A Hypothetical protein BX 20.0 2.6E+02 0.0091 21.1 6.3 37 105-141 25-65 (129)
No 1
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.46 E-value=6.1e-13 Score=119.35 Aligned_cols=118 Identities=16% Similarity=0.119 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeeh
Q 025542 87 GIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVS 162 (251)
Q Consensus 87 ~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~ 162 (251)
+.+++.+.+++.|+.. .+++ .+.++|++||+|.||.. .++|++++++++..+... .. .+.+......
T Consensus 136 ~~~~~~~~v~~~~~a~--~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~~~-~~-~~~~~~~~~~----- 206 (283)
T 3rga_A 136 DEERRKELAREHCLRI--NDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVGS-NV-RETAGLTVAG----- 206 (283)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHHHT-TC-EEEEEEEEEC-----
T ss_pred ChHHHHHHHHHHHHHH--HcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhhcc-Cc-EEEEeeEEec-----
Confidence 4455566666666644 6777 78999999999999986 589999999999999876 32 4433332210
Q ss_pred hhccccccccccccccccCCCceeeccceeeEEEEEEEE-----------------ee-CCCCCeeEEEEEEEEEEcCCC
Q 025542 163 LMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTY-----------------LK-LPWKPLISIDGSTVYELNDEL 224 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~-----------------lk-LPw~P~i~v~G~T~~~fd~~G 224 (251)
..|+.+. ++|+|++. |+ +|-+..+.++|++.|+||++|
T Consensus 207 -----------------~~g~~aa-------~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~~~~~~dG 262 (283)
T 3rga_A 207 -----------------QDGRHAA-------VTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDADG 262 (283)
T ss_dssp -----------------TTSSEEE-------EEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEEEEECTTS
T ss_pred -----------------CCCCEEE-------EEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEEEEECCCc
Confidence 1233454 99999998 22 466778999999999999889
Q ss_pred CEEEEEEeccCCh
Q 025542 225 KITRHAESWNVSA 237 (251)
Q Consensus 225 kI~~H~DyWD~sa 237 (251)
||++|++|||.+.
T Consensus 263 kI~~~r~yw~~~d 275 (283)
T 3rga_A 263 LIDEMRAYWGATD 275 (283)
T ss_dssp CEEEEEEECCGGG
T ss_pred cEEEEEEeeChhh
Confidence 9999999999875
No 2
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=99.45 E-value=1.5e-12 Score=101.73 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCcc---------ccChHHHHHHHHHhhccccCceEEEeeeeEe
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIR---------FRGTELYSRNLRLLVPFFEYPSIGLQNIEKF 157 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~---------f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~ 157 (251)
+++.+.+++.|+.. .+++ ...++|++||+|.||... ++|+++++++++.+...+ ...+.+.+....
T Consensus 7 ~~~~~~v~~~~~a~--~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~-~~~~~~~~~~i~ 83 (139)
T 2a15_A 7 SPALIASQSSWRCV--QAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN-RLTVTCEETFPS 83 (139)
T ss_dssp CHHHHHHHHHHHHH--HTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT-TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHH--hCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhcccc-eeEEeccCceEe
Confidence 44555555555543 5677 788999999999999764 799999999999998777 666655432210
Q ss_pred eeeehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 158 VFLVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 158 ~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
..|+.+ .+.|++++.+ |-+..+.+.|+..|+++++|||++|++|||..+
T Consensus 84 ----------------------~~g~~~-------~~~~~~~~~~--~~G~~~~~~~~~~~~~~~dGkI~~~~~y~d~~~ 132 (139)
T 2a15_A 84 ----------------------SSPDEI-------AHILVLHSEF--DGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDM 132 (139)
T ss_dssp ----------------------SSTTEE-------EEEEEEEEEE--TTTEEEEEEEEEEEEECTTSCEEEEEEECCGGG
T ss_pred ----------------------ecCCEE-------EEEEEEEEEe--CCCCEEEEEEEEEEEECCCCeEEEeehhcCHHH
Confidence 012223 3899998654 455568899999999987899999999999765
Q ss_pred hhHhhhh
Q 025542 238 LEAVGQI 244 (251)
Q Consensus 238 ~~al~Q~ 244 (251)
.++|+
T Consensus 133 --~~~ql 137 (139)
T 2a15_A 133 --MTFGN 137 (139)
T ss_dssp --CEEEC
T ss_pred --HHhhh
Confidence 34454
No 3
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=99.42 E-value=1.1e-12 Score=102.77 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhhhhcccC---CccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEe-eeeEeeeeehh
Q 025542 88 IDDIVTILRSDYENAYFVTG---IFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQ-NIEKFVFLVSL 163 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg---~~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~-~~e~~~~~~~~ 163 (251)
+++++++..+-|+.. +.. +.+.++|++|++|.||...++|++++.+++..+...+..++|.++ .+..
T Consensus 5 ~~~~v~ry~~aw~~~--d~~~~~~~l~~l~a~D~~~~dP~~~~~G~~ai~~~~~~~~~~~~~~~f~~~~~~~~------- 75 (121)
T 3dxo_A 5 HLTIAQTYLAAWNEE--DNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFPGYRFVLAGTPDG------- 75 (121)
T ss_dssp HHHHHHHHHHHHHCS--CHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHSTTCEEEEEEEEEE-------
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCeEEECCCCCcCCHHHHHHHHHHHHHHCCCcEEEEccCcce-------
Confidence 345566666555533 221 258999999999999999999999999999999999988899886 4432
Q ss_pred hccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCC
Q 025542 164 MVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVS 236 (251)
Q Consensus 164 ~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~s 236 (251)
. ++.++.+|+|. + +.+ ...+.|++.++|+++|||+++..+||.-
T Consensus 76 -----------------~-------~~~~~~~w~~~---~-~~g-~~~~~G~d~l~~~~dGrI~~~~~f~d~~ 119 (121)
T 3dxo_A 76 -----------------H-------GNFTRFSWRLI---S-PDG-DDVAGGTDVVSLNTEGRIDNVVGFLDGA 119 (121)
T ss_dssp -----------------E-------TTEEEEEEEEE---C-TTS-CEEEEEEEEEEECTTSSEEEEEEEEEC-
T ss_pred -----------------e-------CCEEEEEEEEe---C-CCC-CceeeEEEEEEECCCCCEEEEEEecCCC
Confidence 1 12234999997 1 333 4679999999999889999999999964
No 4
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=99.39 E-value=3.7e-12 Score=102.88 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=85.4
Q ss_pred ccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccccccccccccccc
Q 025542 105 VTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTA 180 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~ 180 (251)
..+| -..++|++||+|.||.. .++|++++++.+..+...+.+.++++.++..
T Consensus 39 n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~~~~~d~~~~v~~~~~------------------------ 94 (158)
T 4h3u_A 39 TGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIENVHVTITKAYR------------------------ 94 (158)
T ss_dssp HSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEE------------------------
T ss_pred HcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhhccCCccceeEeEEee------------------------
Confidence 3555 67899999999999975 5899999999999998888877887776653
Q ss_pred CCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhhhhcCCC
Q 025542 181 LGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVGQIFTPG 248 (251)
Q Consensus 181 ~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~Q~~~p~ 248 (251)
.|+.. .++|++++.++-. +..+.+.|++.++++ +|||++|+||||.. +.++|+=-|.
T Consensus 95 ~gd~v-------~~~~~~~gt~~~t-G~~~~~~~~~v~~~~-dGkI~~~~~y~D~~--~ll~QlGlp~ 151 (158)
T 4h3u_A 95 AGDHV-------TIEAVYGGHIKGA-PTPFAVPMATLLRTR-GEEITSDQDYYSLS--SVLAQSGLPA 151 (158)
T ss_dssp ETTEE-------EEEEEEEEEETTS-SSCEEEEEEEEEEEE-TTEEEEEEEEECHH--HHHHHHTCCT
T ss_pred cCceE-------EEEEEEEEEecCc-cCcceeeeEEEEEEE-CCEEEEEEEEECHH--HHHHHcCCCC
Confidence 12223 3999999998632 346899999999998 49999999999974 4566764443
No 5
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.39 E-value=1e-11 Score=99.31 Aligned_cols=117 Identities=13% Similarity=0.032 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhc
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMV 165 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~ 165 (251)
.++..+.+++.|+.. ..++ ...++|++||+|.||...+.|++.+++.+..+...+.+.++++.++...
T Consensus 3 ~~~~~~~v~~~~~a~--~~~d~~~~~~~~a~D~v~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 72 (152)
T 2gex_A 3 TTANKERCLEMVAAW--NRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFPDLRLDVRSIVGE-------- 72 (152)
T ss_dssp HHHHHHHHHHHHHHH--HTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCTTCEEEEEEEEEE--------
T ss_pred hhHHHHHHHHHHHHH--hCCCHHHHHHHcCCCeEEeCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEEe--------
Confidence 344556666666642 5666 6789999999999987789999999999999988887788887766431
Q ss_pred cccccccccccccccCCCceeeccceeeEEEEEEEEeeC------CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 166 GRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKL------PWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 166 ~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkL------Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+ .|.++|++++.+.- |-+..+.+.|++.++++++|||++|.+|||..+
T Consensus 73 ----------------gd-------~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~d~GkI~e~~~~~D~~~ 127 (152)
T 2gex_A 73 ----------------GD-------RVMLRITCSATHQGVFMGIAPTGRKVRWTYLEELRFSEAGKVVEHWDVFNFSP 127 (152)
T ss_dssp ----------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEECTTSCEEEEEEEEECHH
T ss_pred ----------------CC-------EEEEEEEEEEEecCCcCCcCCCCCEEEEEEEEEEEEecCCEEEEEEEeccHHH
Confidence 12 23399999998841 456678999999999986699999999999755
No 6
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.38 E-value=2.3e-12 Score=115.62 Aligned_cols=115 Identities=12% Similarity=0.001 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeeh
Q 025542 87 GIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVS 162 (251)
Q Consensus 87 ~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~ 162 (251)
+.++..+.+++.|+.. .+++ .+.++|++|++|.||.. .++|+++++++|..+...+.. +++.....
T Consensus 4 ~~~~~~~~v~~~~~~~--~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~~~~~~--~~~~~~~~------ 73 (283)
T 3rga_A 4 AETVRKEVALEYCRRV--NAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAVH--EEPGRPYA------ 73 (283)
T ss_dssp CHHHHHHHHHHHHHHH--HHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHTTCE--EEECCCBC------
T ss_pred ChHHHHHHHHHHHHHH--hcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHHhhcCc--eEEEEEEe------
Confidence 4455666677777644 5677 78999999999999986 689999999999998876643 43322211
Q ss_pred hhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCC---eeEEEEEEEEEEcCCCCEEEEEEeccCC
Q 025542 163 LMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKP---LISIDGSTVYELNDELKITRHAESWNVS 236 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P---~i~v~G~T~~~fd~~GkI~~H~DyWD~s 236 (251)
...|+.+. ++|+|++.++ .+| .+.+.|++.++||++|||++|+||||.+
T Consensus 74 ----------------~~~G~~v~-------~~~~~~~~~~--g~~~g~~v~~~gi~v~r~d~dGkI~~~rdyw~~~ 125 (283)
T 3rga_A 74 ----------------AHDGTSVV-------LPATVTVGAP--GAPPQRRGRTRVMGVIEVGEDGLIREMRVMWGVT 125 (283)
T ss_dssp ----------------CSSSSEEE-------EEEEEEECST--TCCGGGCEEEEEEEEEEECTTSCEEEEEEECCGG
T ss_pred ----------------eeeCCEEE-------EEEEEEEEeC--CCCccceEEEEEEEEEEECCCCcEEEEEEEECcc
Confidence 01233344 8999998853 444 5899999999999899999999999985
No 7
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=99.30 E-value=2e-11 Score=98.99 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=83.9
Q ss_pred ccCCHHHHHHHHHHHhhhhhcccCC---ccccccccceeeeCC----CccccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 84 LVSGIDDIVTILRSDYENAYFVTGI---FTSEIYAEDCIFEDP----TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 84 ~~~~~~~ll~~L~~Dy~~~Yfvtg~---~~~~iY~eD~~F~DP----~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
...++.++++++.+-. ..|+ .+.++|++||+|.|| .....|+++++++++.+..+++.+.+++.++..
T Consensus 18 ~~~~~kevv~r~~e~~-----~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~~~~~~i~~~~v 92 (136)
T 3hk4_A 18 QGMTIAEIAKDFTELL-----KQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQENHEVHGGSVEGPYV 92 (136)
T ss_dssp -CCCHHHHHHHHHHHH-----HTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHH-----HcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHHhcCCeeeeeecceEE
Confidence 3455566655555443 3555 469999999999999 456899999999999998877766677765542
Q ss_pred eeeeehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEec
Q 025542 157 FVFLVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESW 233 (251)
Q Consensus 157 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyW 233 (251)
. |+ .+.++|+|++.++ |-+.++.++|++.+++. +|||++|+=|+
T Consensus 93 ~------------------------gd-------~v~v~~~~~gth~-~tG~~i~~~~i~v~rv~-DGkIv~~rffy 136 (136)
T 3hk4_A 93 N------------------------GD-------QFALRFKFDVTPK-ATGERVTMDEVGLYTVK-NGKITEERFYY 136 (136)
T ss_dssp E------------------------TT-------EEEEEEEEEEEET-TTCCCEEEEEEEEEEEE-TTEEEEEEEEC
T ss_pred c------------------------CC-------EEEEEEEEEEEEC-CCCcEEEEEEEEEEEEE-CCEEEEEEecC
Confidence 1 11 2339999999997 45668999999999996 59999998553
No 8
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=99.28 E-value=6.8e-11 Score=95.41 Aligned_cols=115 Identities=7% Similarity=-0.040 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhc
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMV 165 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~ 165 (251)
.++..+.+++.|+. +..++ ...++|++||+|.|| ..+.|++.+++.++.+...+.+.++++.++...
T Consensus 3 ~~~~~~~v~~~~~a--~~~~D~~~~~~~~a~D~v~~~p-~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 71 (158)
T 2gey_A 3 MAERKALCLEMVAA--WNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFPDLQLEVKSIMAE-------- 71 (158)
T ss_dssp HHHHHHHHHHHHHH--HHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHSTTCEEEEEEEEEE--------
T ss_pred hHHHHHHHHHHHHH--HcCCCHHHHHHHcCCCeEEeCC-CCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEEe--------
Confidence 34455666666662 35666 678999999999999 578999999999999988887888888776431
Q ss_pred cccccccccccccccCCCceeeccceeeEEEEEEEEee------CCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 166 GRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLK------LPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 166 ~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk------LPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+ .|.++|++++.+. .|-+..+.+.|++.|+++ +|||++|.+|||...
T Consensus 72 ----------------gd-------~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~-dGkI~e~~~~~D~~~ 125 (158)
T 2gey_A 72 ----------------ED-------RVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRFV-DGKVVEHWDVINMRP 125 (158)
T ss_dssp ----------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE-TTEEEEEEEEEECHH
T ss_pred ----------------CC-------EEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEecCHHH
Confidence 12 2339999999874 245567889999999998 599999999999765
No 9
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=99.28 E-value=3e-11 Score=97.25 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=91.8
Q ss_pred HHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCcc--ccChHHHHHHHHHhhcccc-CceEEEeeeeEeeeeehhh
Q 025542 90 DIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIR--FRGTELYSRNLRLLVPFFE-YPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 90 ~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~--f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~~~~~~~~~ 164 (251)
+-.+.+++.|+. |..++ ...++|++|+.|.||... ..|++.+++.+..+...+. +.++++.++...
T Consensus 12 ~~~~~v~~~~~a--~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~~~~~p~d~~~~i~~~~~~------- 82 (153)
T 2f99_A 12 EQIAAVRRMVEA--YNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEVGIEER------- 82 (153)
T ss_dssp HHHHHHHHHHHH--HHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEEEEEEE-------
T ss_pred HHHHHHHHHHHH--HhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHCCCCcEEEEEEEEEe-------
Confidence 335556666662 24555 688999999999999877 4999999999999988887 888888776531
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeC------CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKL------PWKPLISIDGSTVYELNDELKITRHAESWNVSAL 238 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkL------Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~ 238 (251)
|+ .|.++|++++.+.- |-+..+.+.|++.|+++ +|||++|.+|||..+
T Consensus 83 -----------------gd-------~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v~-dGkI~e~~~~~D~~~- 136 (153)
T 2f99_A 83 -----------------AD-------WVRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHFV-DGKIHHHRDWPDYQG- 136 (153)
T ss_dssp -----------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE-TTEEEEEEEEECHHH-
T ss_pred -----------------CC-------EEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEecCHHH-
Confidence 11 23399999999841 45667899999999998 599999999999755
Q ss_pred hHhhhh
Q 025542 239 EAVGQI 244 (251)
Q Consensus 239 ~al~Q~ 244 (251)
.++|+
T Consensus 137 -~~~ql 141 (153)
T 2f99_A 137 -TYRQL 141 (153)
T ss_dssp -HHHHT
T ss_pred -HHHhc
Confidence 45554
No 10
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=99.28 E-value=2.7e-11 Score=98.85 Aligned_cols=117 Identities=14% Similarity=0.055 Sum_probs=90.8
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC-ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhc
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMV 165 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~ 165 (251)
+.-++.+++.|+. |..++ ...++|++|+.|.+|. ....|++.+++.+..+...+.+.++++.++..
T Consensus 34 ~~n~~~v~~~~~a--~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~~~~~~~~~pd~~~~i~~~~~--------- 102 (159)
T 3k0z_A 34 TEMVHAAQRFYAF--WDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVPNIHCEIEDLLV--------- 102 (159)
T ss_dssp HHHHHHHHHHHHH--HHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHHHHHHHTTCCSEEEEEEEEEE---------
T ss_pred HHHHHHHHHHHHH--HhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEE---------
Confidence 3445666666652 25566 6788999999999996 58999999999999998888777887776543
Q ss_pred cccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhhhh
Q 025542 166 GRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVGQI 244 (251)
Q Consensus 166 ~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~Q~ 244 (251)
+ |+ .|.++|++++.++ +..+.+.|++.|++. +|||++|.+|||... .++|+
T Consensus 103 ----~-----------gd-------~v~~~~~~~gt~~---G~~v~~~~~~i~r~~-dGkI~e~~~~~D~~~--ll~QL 153 (159)
T 3k0z_A 103 ----V-----------GD-------KVTARLSFTGTHN---DKKIDFFAIDILHVK-DGKITEDWHLEDNLT--LKQQL 153 (159)
T ss_dssp ----E-----------TT-------EEEEEEEEEEEET---TEEEEEEEEEEEEEE-TTEEEEEEEEECHHH--HHHHT
T ss_pred ----E-----------CC-------EEEEEEEEEEEEC---CeEEEEEEEEEEEEE-CCEEEEEEEeeCHHH--HHHHc
Confidence 1 11 2339999999987 557899999999997 599999999999765 44443
No 11
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=99.28 E-value=4.1e-11 Score=94.71 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=86.8
Q ss_pred HHHHHHHhhhhhcccCC--cccccccccee-eeCCC----ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCI-FEDPT----IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~-F~DP~----~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~ 164 (251)
.+.+++.|+.. |..++ ...++|++||+ +.+|. ....|++.+++.+..+...+.+.++++.++...
T Consensus 9 ~~~v~~~~~~~-~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~~------- 80 (146)
T 3f9s_A 9 KEILTQFTREV-WSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDIQGLFAD------- 80 (146)
T ss_dssp HHHHHHHHHHH-TTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHSTTCEEEEEEEEEE-------
T ss_pred HHHHHHHHHHH-HcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCCCcEEEEEEEEEe-------
Confidence 44555555432 23555 67899999999 99994 468999999999999988888888888766431
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeC------CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKL------PWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkL------Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+ .|.++|++++.+.- |-+..+.+.|++.++++ +|||++|.+|||..+
T Consensus 81 -----------------gd-------~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~-dGkI~e~~~~~D~~~ 134 (146)
T 3f9s_A 81 -----------------GD-------AVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFD-GNRLTGHWQITDRLG 134 (146)
T ss_dssp -----------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE-ETEEEEEEEEECHHH
T ss_pred -----------------CC-------EEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEEeCHHH
Confidence 11 23399999999852 33557889999999998 599999999999765
No 12
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.26 E-value=6.2e-11 Score=92.42 Aligned_cols=110 Identities=14% Similarity=0.100 Sum_probs=85.2
Q ss_pred ccCCHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC-----ccccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 84 LVSGIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-----IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 84 ~~~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-----~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
+.++.++..+.+++.|+.. ..++ .+.++|++||+|.||. ..++|++++++.+.. ...+.+.++++.++..
T Consensus 12 ~~m~~~~~~~~v~~~~~a~--~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~~~~~~i~~~~~ 88 (129)
T 3fh1_A 12 PDDRSEQTAEIMRRFNDVF--QLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IATQPGTRFDLEETFV 88 (129)
T ss_dssp CCTTHHHHHHHHHHHHHHH--HTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHH-HHHCTTCEEEEEEEEE
T ss_pred CCCCchhHHHHHHHHHHHH--HccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHH-HhcCCCceEEEeEEEE
Confidence 4567777778888888732 5666 7889999999999974 356999999999988 6666667787766643
Q ss_pred eeeeehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEecc
Q 025542 157 FVFLVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWN 234 (251)
Q Consensus 157 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD 234 (251)
.|+.+. ++|++++ +..+.+.|++.|+++ +|||++|.+||+
T Consensus 89 ------------------------~gd~v~-------~~~~~~~------G~~~~~~~~~~~~~~-dGkI~e~~~y~~ 128 (129)
T 3fh1_A 89 ------------------------AGDRAT-------IRWRYWM------ADGNSVRGVNLMRVQ-DGRIVEAMGYVK 128 (129)
T ss_dssp ------------------------ETTEEE-------EEEEEEC------TTSCEEEEEEEEEEE-TTEEEEEEEEEC
T ss_pred ------------------------cCCEEE-------EEEEEEC------CCeeEEeceEEEEEc-CCEEEEEEEEEc
Confidence 122232 8999876 346889999999998 599999999997
No 13
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=99.24 E-value=1.7e-10 Score=93.50 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC--ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhh
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~ 164 (251)
+...+.+++.|+.. .+|+ .+.++|++||+|.||. ..++|++.+.++|..+...+. .|.++.....
T Consensus 9 ~~~~~~~~~~~~a~--~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~~~~~--~f~~~~~~~~------- 77 (143)
T 3mso_A 9 ANAAATLAEWHGLI--ARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVFE--DFAYHRQLAS------- 77 (143)
T ss_dssp HHHHHHHHHHHHHH--HTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCE--EEEEEEEEEE-------
T ss_pred HHHHHHHHHHHHHH--hcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHHhhCC--ceEEEEEEEc-------
Confidence 34456677777644 5677 7999999999999999 889999999999999988775 5766554321
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCC-hhhHhhh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVS-ALEAVGQ 243 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~s-a~~al~Q 243 (251)
+++.. +.|+|++.+. + ..+.|++.++||++|||++.+.+||.- +..+|.+
T Consensus 78 -----------------~dg~~-------~~~~f~~~~~---g--~~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~ 128 (143)
T 3mso_A 78 -----------------ADGRS-------VVLEFSARVG---E--RELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGE 128 (143)
T ss_dssp -----------------TTSSE-------EEEEEEEEET---T--EEEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHH
T ss_pred -----------------cCCCE-------EEEEEEEEEC---C--EEEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHH
Confidence 11122 4555555532 2 289999999999889999999999973 4455544
Q ss_pred h
Q 025542 244 I 244 (251)
Q Consensus 244 ~ 244 (251)
.
T Consensus 129 ~ 129 (143)
T 3mso_A 129 E 129 (143)
T ss_dssp H
T ss_pred H
Confidence 3
No 14
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=99.24 E-value=9.7e-11 Score=89.61 Aligned_cols=116 Identities=14% Similarity=0.098 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeeh
Q 025542 87 GIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVS 162 (251)
Q Consensus 87 ~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~ 162 (251)
+.++..+.+++.|+.. .+|+ .+.++|++|+.|.+|.. .++|++++++.+..+...+....+.+..+..
T Consensus 5 ~~~~~~~~v~~~~~a~--~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~------ 76 (131)
T 1oh0_A 5 TAQEVQGLMARYIELV--DVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRA------ 76 (131)
T ss_dssp CHHHHHHHHHHHHHHH--HHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSCCEEEESSCCEE------
T ss_pred CHHHHHHHHHHHHHHH--hCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHHhhccceeEeecceEEE------
Confidence 3455555566655533 5676 67899999999999976 8999999999999987766543444433321
Q ss_pred hhccccccccccccccccCCCce-eeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChh
Q 025542 163 LMVGRREGRMRGLHNSTALGGHI-FLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSAL 238 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~-~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~ 238 (251)
.|+.+ . +.|++++.. -+..+.+.|+..|++|++|||.++++|||..+.
T Consensus 77 ------------------~g~~~~~-------~~~~~~~~~---~G~~~~~~~~~~~~~~~dGkI~~~~~~~d~~~l 125 (131)
T 1oh0_A 77 ------------------SHNGCGA-------MPFRVEMVW---NGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNL 125 (131)
T ss_dssp ------------------CSSSEEE-------EEEEEEEES---SSSEEEEEEEEEEEECTTSCEEEEEEECCGGGE
T ss_pred ------------------CCCeEEE-------EEEEEEEEe---CCcEEEEEEEEEEEECCCCcEEhHHhhcChhhh
Confidence 22223 3 899998842 344688999999999888999999999998654
No 15
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=99.23 E-value=2e-10 Score=85.71 Aligned_cols=112 Identities=10% Similarity=0.103 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC--ccccChHHHHHHHHHhhccccCceEEEe-eeeEeeeeeh
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFEYPSIGLQ-NIEKFVFLVS 162 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~~~~f~l~-~~e~~~~~~~ 162 (251)
.+++.+.+++.|+.. .+++ ...++|++||+|.+|. ..+.|++++++.+..+...+. .+.+. ++..
T Consensus 4 ~~~~~~~v~~~~~a~--~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~--~~~~~~~~~~------ 73 (125)
T 1ohp_A 4 PEHMTAVVQRYVAAL--NAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPL--AVELTQEVRA------ 73 (125)
T ss_dssp HHHHHHHHHHHHHHH--HHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSCC--EEEECSCCEE------
T ss_pred HHHHHHHHHHHHHHH--hCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhcccCc--eEEEeeeEEE------
Confidence 445555566655533 5677 6789999999999995 489999999999998876653 55554 3331
Q ss_pred hhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 163 LMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
.|+.+ .+.|++++.+ +. ..+.+.|+..|+++++|||+++++|||..+
T Consensus 74 ------------------~g~~~-------~~~~~~~~~~--~g-~~~~~~~~~~~~~~~dGkI~~~~~~~d~~~ 120 (125)
T 1ohp_A 74 ------------------VANEA-------AFAFIVSFEY--QG-RKTVVAPIDHFRFNGAGKVVSMRALFGEKN 120 (125)
T ss_dssp ------------------ETTEE-------EEEEEEEEEE--TT-EEEEECCEEEEEECTTSCEEEEEEECCGGG
T ss_pred ------------------eCCEE-------EEEEEEEEEe--cC-ceEEEEEEEEEEECCCCcEEEEEEEEChhh
Confidence 12223 3899998854 33 356788999999987799999999999765
No 16
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=99.22 E-value=1.3e-10 Score=90.97 Aligned_cols=118 Identities=12% Similarity=0.044 Sum_probs=87.8
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCC-----ccccChHHHH-HHHHHhhccccCceEEEeeeeEeeeeehh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-----IRFRGTELYS-RNLRLLVPFFEYPSIGLQNIEKFVFLVSL 163 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-----~~f~Gld~y~-~~~~~L~~~~~~~~f~l~~~e~~~~~~~~ 163 (251)
.+.+++.|+.. ..|+ .+.++|++||+|.+|. ..++|++++. +.+..|...+...++++.++..
T Consensus 15 ~~~v~~~~~a~--~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~------- 85 (140)
T 3ec9_A 15 YQIVADHYAAS--DRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHD------- 85 (140)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEEEEEEEEEEEEE-------
T ss_pred HHHHHHHHHHH--hCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHHhhCCcceeEEEEEEE-------
Confidence 45666777633 5676 6789999999999985 4689999996 6788888777666777766542
Q ss_pred hccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhhh
Q 025542 164 MVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVGQ 243 (251)
Q Consensus 164 ~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~Q 243 (251)
.|+ .|.+.|++++.++ +-+..+.+.++..|++. +|||++|++|||..+ +.+
T Consensus 86 -----------------~gd-------~v~v~~~~~~~~~-~tG~~~~~~~~~v~~v~-dGkI~~~~~y~D~~~---~~~ 136 (140)
T 3ec9_A 86 -----------------AGD-------TVIGVGRYSGTYR-RTGKSFECRVAHVWRVD-AGKIVHFEQFTDTLL---VAQ 136 (140)
T ss_dssp -----------------ETT-------EEEEEEEEEEEET-TTCCEEEEEEEEEEEEE-TTEEEEEEEEEBHHH---HHH
T ss_pred -----------------cCC-------EEEEEEEEEEEEc-CCCCEEEeEEEEEEEEE-CCEEEEEEEEEcHHH---HHH
Confidence 112 2238899999875 34556888999999997 599999999999754 445
Q ss_pred hcCC
Q 025542 244 IFTP 247 (251)
Q Consensus 244 ~~~p 247 (251)
+|+|
T Consensus 137 a~~p 140 (140)
T 3ec9_A 137 AMQP 140 (140)
T ss_dssp HHCC
T ss_pred hhCc
Confidence 5554
No 17
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.21 E-value=1.1e-10 Score=91.28 Aligned_cols=111 Identities=16% Similarity=0.118 Sum_probs=85.0
Q ss_pred HHHHHHhhhhhcccCC--ccccccccceeeeCCCccc--cChHHHHHHHHHhhcccc-CceEEEeeeeEeeeeehhhccc
Q 025542 93 TILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRF--RGTELYSRNLRLLVPFFE-YPSIGLQNIEKFVFLVSLMVGR 167 (251)
Q Consensus 93 ~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f--~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~~~~~~~~~~~~ 167 (251)
+.+++.|+. +..++ ...++|++||+|.+|.... .|++.+++.+..+...+. +.++++.++...
T Consensus 6 ~~v~~~~~a--~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 73 (144)
T 1sjw_A 6 EIVRRMVSA--FNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIEER---------- 73 (144)
T ss_dssp HHHHHHHHH--HHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEEEEEEEE----------
T ss_pred HHHHHHHHH--HhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEEEEEEe----------
Confidence 444445541 23455 7789999999999997653 899999999999988887 788887776431
Q ss_pred cccccccccccccCCCceeeccceeeEEEEEEEEee------CCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 168 REGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLK------LPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 168 ~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk------LPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+ .|.++|++++.+. .|-+..+.+.|++.++++ +|||++|.+|||..+
T Consensus 74 --------------gd-------~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~-dGkI~~~~~~~D~~~ 127 (144)
T 1sjw_A 74 --------------GP-------WVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIV-DGKIRDHRDWPDFQG 127 (144)
T ss_dssp --------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE-TTEEEEEEEEECHHH
T ss_pred --------------CC-------EEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEecCHHH
Confidence 11 2339999999983 144557889999999998 599999999999754
No 18
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=7e-11 Score=91.60 Aligned_cols=115 Identities=12% Similarity=-0.002 Sum_probs=86.8
Q ss_pred HHHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccc
Q 025542 91 IVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRR 168 (251)
Q Consensus 91 ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~ 168 (251)
..+.+++.|+.. ..++ ...++|++|+.|.+ ...|++.+++.+..+...+.+.+++++++..
T Consensus 5 ~~~~v~~~~~~~--~~~d~~~~~~~~a~d~~~~~---~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~------------ 67 (128)
T 3ehc_A 5 LNDIYLAYLDSL--NHQAFDELGTFVDDNVEHNG---RPFGLSGYRDMLVKDFADIPDLRFEAEILVS------------ 67 (128)
T ss_dssp HHHHHHHHHHHH--HTTCGGGGGGTEEEEEEETT---BCCHHHHHHHHHHHHHHHCTTCCCCEEEEEE------------
T ss_pred HHHHHHHHHHHH--hcCCHHHHHHhcCcceEeCC---CCCCHHHHHHHHHHHHhhCCCceEEEEEEEE------------
Confidence 345555556522 4555 67899999999986 5699999999999998888888888876642
Q ss_pred ccccccccccccCCCceeeccceeeEEEEEEEEee------CCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhh
Q 025542 169 EGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLK------LPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVG 242 (251)
Q Consensus 169 e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk------LPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~ 242 (251)
.|+ .|.++|++++.++ .|-+..+.+.|++.|++. +|||++|.+|||..+. ++
T Consensus 68 ------------~gd-------~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~-dGkI~e~~~~~D~~~~--~~ 125 (128)
T 3ehc_A 68 ------------DAT-------RLAARLFFDCTPKSIFMDLPVNGRRVQFCEHVFYDFE-QAKIRRVWSVLDKVAI--ER 125 (128)
T ss_dssp ------------CSS-------EEEEEEEEEECCSSEETTEECTTCCEEEEEEEEEEEE-TTEEEEEEEEECHHHH--HH
T ss_pred ------------ECC-------EEEEEEEEEEEEcCcccCCCCCCCEEEEEEEEEEEEe-CCEEEEEEEccCHHHH--HH
Confidence 112 2339999999974 245667899999999998 4999999999996543 44
Q ss_pred hh
Q 025542 243 QI 244 (251)
Q Consensus 243 Q~ 244 (251)
|+
T Consensus 126 Ql 127 (128)
T 3ehc_A 126 QL 127 (128)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 19
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=99.19 E-value=1.9e-10 Score=91.00 Aligned_cols=118 Identities=11% Similarity=0.043 Sum_probs=89.9
Q ss_pred HHHHHHHhhhhhcccCC----ccccccccceeee-CCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcc
Q 025542 92 VTILRSDYENAYFVTGI----FTSEIYAEDCIFE-DPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVG 166 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~----~~~~iY~eD~~F~-DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~ 166 (251)
.+.+++.|+.. +..++ ...++|++||.|. .|.....|++.+++.+..+...+.+.++++.++...
T Consensus 12 ~~~v~~~~~~~-~~~~d~~~~~~~~~~a~d~~~~~~~~~~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~~--------- 81 (146)
T 3kkg_A 12 VETVLRLFDEG-WGAQDGWRDVWRETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFPRLEVVVENVTVE--------- 81 (146)
T ss_dssp HHHHHGGGTTT-STTSTTHHHHHHHHEEEEEEEEETTSCCEESHHHHHHHHHHHHHHSTTCEEEEEEEEEE---------
T ss_pred HHHHHHHHHHH-HcCCCcHHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEEe---------
Confidence 45666666633 24555 5678999999999 455789999999999999988888888887766531
Q ss_pred ccccccccccccccCCCceeeccceeeEEEEEEEEeeC------CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhH
Q 025542 167 RREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKL------PWKPLISIDGSTVYELNDELKITRHAESWNVSALEA 240 (251)
Q Consensus 167 ~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkL------Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~a 240 (251)
|+ .|.++|++++.+.- |-+..+.+.|++.+++. +|||++|.+|||..+ .
T Consensus 82 ---------------gd-------~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~-dGkI~e~~~~~D~~~--l 136 (146)
T 3kkg_A 82 ---------------GD-------NVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLA-DGQVIEMRYFTDLLA--V 136 (146)
T ss_dssp ---------------TT-------EEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE-TTEEEEEEEEECHHH--H
T ss_pred ---------------CC-------EEEEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEecCHHH--H
Confidence 11 23399999999852 34556889999999997 599999999999854 4
Q ss_pred hhhh
Q 025542 241 VGQI 244 (251)
Q Consensus 241 l~Q~ 244 (251)
++|+
T Consensus 137 ~~Ql 140 (146)
T 3kkg_A 137 MTAI 140 (146)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5554
No 20
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=99.19 E-value=5.1e-11 Score=92.31 Aligned_cols=121 Identities=15% Similarity=0.040 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc-----cccChHHHHHHHHHhhccccCceEEEeeeeEeeeee
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI-----RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLV 161 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~-----~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~ 161 (251)
++..+.+++.|+.. .+|+ ...++|++||.|.+|.. .++|++.+++.+..+...+...++++.++..
T Consensus 5 ~~~~~~v~~~~~a~--~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~----- 77 (135)
T 3fgy_A 5 QENVQIVKDFFAAM--GRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEISYPEPPEFVA----- 77 (135)
T ss_dssp HHHHHHHHHHHHHH--HHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHHEEEECSSCCEEEE-----
T ss_pred chHHHHHHHHHHHH--HcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHHHhhCcceeeeEEEEE-----
Confidence 45566777777743 5677 67899999999999873 5799999999999987766544444443321
Q ss_pred hhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHh
Q 025542 162 SLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAV 241 (251)
Q Consensus 162 ~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al 241 (251)
.|+ .|.+.|++++.++- -+..+.+.++..|++. +|||++|++|||..+ +
T Consensus 78 -------------------~gd-------~v~v~~~~~~~~~~-~G~~~~~~~~~~~~~~-dGkI~~~~~y~D~~~---l 126 (135)
T 3fgy_A 78 -------------------QGE-------RVLVVGFATGRVKS-TNRTFEDDWVFAITVR-KSKVTSIREYIDTLA---L 126 (135)
T ss_dssp -------------------ETT-------EEEEEEEEEEEETT-TCCEEEEEEEEEEEEE-TTEEEEEEEECBHHH---H
T ss_pred -------------------cCC-------EEEEEEEEeEEEcC-CCCEecccEEEEEEEE-CCEEEEEEEEecHHH---H
Confidence 112 23389999998753 3446889999999995 599999999999755 4
Q ss_pred hhhcCC
Q 025542 242 GQIFTP 247 (251)
Q Consensus 242 ~Q~~~p 247 (251)
.++|.|
T Consensus 127 ~~a~~~ 132 (135)
T 3fgy_A 127 ARATNF 132 (135)
T ss_dssp HHHTTT
T ss_pred HHHhcC
Confidence 445555
No 21
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=99.17 E-value=1.6e-10 Score=92.20 Aligned_cols=119 Identities=8% Similarity=-0.100 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC--------ccccChHHHHHHHHHhhccccCceEEEeeeeEeee
Q 025542 90 DIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--------IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVF 159 (251)
Q Consensus 90 ~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--------~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~ 159 (251)
++.+.+++.|+.+ ..|+ ...++|++||.|.+|- ...+|++++.++++.|...+...+++++++..
T Consensus 5 ~~~~~v~~~~~a~--~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~~~~~~~~~~~--- 79 (143)
T 3dm8_A 5 SLWRFSRALHRAL--NDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYRYHRESVML--- 79 (143)
T ss_dssp HHHHHHHHHHHHH--HHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEE---
T ss_pred hHHHHHHHHHHHH--HCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcCcceEEEEEEEE---
Confidence 4567777778754 5777 6789999999999974 35899999999999998888777788876653
Q ss_pred eehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhh
Q 025542 160 LVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALE 239 (251)
Q Consensus 160 ~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~ 239 (251)
.|+.+. +.+++++.. .+-+..+.+.++..+++.+ |||++|++|||..++
T Consensus 80 ---------------------~gd~v~-------v~~~~~~~~-~~tG~~~~~~~~~~~~v~d-GkI~~~r~y~D~~~l- 128 (143)
T 3dm8_A 80 ---------------------GIDSAA-------SMVRYSLTA-AGTNRPISVRMALFTQFQN-GRLTNLRMVLDTFDL- 128 (143)
T ss_dssp ---------------------CSSEEE-------EEEEEEEEE-TTTCCEEEEEEEEEEEEET-TEEEEEEEEECHHHH-
T ss_pred ---------------------cCCeEE-------EEEEEEEEE-eCCCCEEEEEEEEEEEEEC-CEEEEEEEEEcHHHH-
Confidence 122232 455555443 3556678999999999974 999999999998654
Q ss_pred Hhhhhc
Q 025542 240 AVGQIF 245 (251)
Q Consensus 240 al~Q~~ 245 (251)
++|++
T Consensus 129 -~~q~~ 133 (143)
T 3dm8_A 129 -VEQAL 133 (143)
T ss_dssp -HHHHH
T ss_pred -HHHHh
Confidence 35554
No 22
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=99.15 E-value=2.7e-10 Score=87.68 Aligned_cols=112 Identities=11% Similarity=0.066 Sum_probs=84.5
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCC--------ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeee
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--------IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLV 161 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--------~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~ 161 (251)
++.+++.|+.. .+|+ ...++|++||+|.+|. ..++|++.+++.+..+...+.+.+++++++..
T Consensus 6 ~~~v~~~~~a~--~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 78 (132)
T 3ebt_A 6 MQTVRESYEAF--HRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFIE----- 78 (132)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEEEEEEEEEEE-----
T ss_pred HHHHHHHHHHH--hccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCCceEEEEeEEEE-----
Confidence 45566666542 5666 5678999999999984 48899999999999998877766777766542
Q ss_pred hhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhh
Q 025542 162 SLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALE 239 (251)
Q Consensus 162 ~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~ 239 (251)
.|+.. .+.|++++. .|-+..+.+.++..+++. +|||++|++|||..+..
T Consensus 79 -------------------~gd~v-------~v~~~~~~~--~~~G~~~~~~~~~v~~~~-dGkI~~~~~y~D~~~~~ 127 (132)
T 3ebt_A 79 -------------------SGERI-------VVLGTRRVT--AVNGRSATLKFVHVWRFE-NGRAVTFEDHFDTAEMI 127 (132)
T ss_dssp -------------------ETTEE-------EEEEEEEEE--ETTSCEEEEEEEEEEEEE-TTEEEEEEEECCHHHHH
T ss_pred -------------------eCCEE-------EEEEEEEEE--eCCCCEEeeeEEEEEEEE-CCEEEEEEEEeeHHHHH
Confidence 11222 388999876 244556889999999996 59999999999975543
No 23
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=99.14 E-value=2.1e-10 Score=88.59 Aligned_cols=107 Identities=12% Similarity=0.030 Sum_probs=79.9
Q ss_pred cCCHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC---------ccccChHHHHHHHHHhhccccCceEEEee
Q 025542 85 VSGIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT---------IRFRGTELYSRNLRLLVPFFEYPSIGLQN 153 (251)
Q Consensus 85 ~~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~---------~~f~Gld~y~~~~~~L~~~~~~~~f~l~~ 153 (251)
+++.+++.+.+++.|+.. ..++ .+.++|++||+|.||. ..++|+++++++++.++..+.+.+|++.+
T Consensus 4 ~m~~~~~~~~~~~~~~a~--n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~ 81 (122)
T 3h3h_A 4 PITQAFAQQFSREWIDAW--NAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIPDLHFEWIA 81 (122)
T ss_dssp CCCHHHHHHHHHHHHHHH--HTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCTTCCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHH--hccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 466666666666666633 5667 6789999999999993 67999999999999998888888888766
Q ss_pred eeEeeeeehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEec
Q 025542 154 IEKFVFLVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESW 233 (251)
Q Consensus 154 ~e~~~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyW 233 (251)
+.. . . ..|+|++..+ -+..+ +..++||++|||++++.||
T Consensus 82 ~~~-------------~--------------~--------~~~~~~~~~~--~G~~~----~~~~~~~~dGkI~~~~~~~ 120 (122)
T 3h3h_A 82 TLA-------------G--------------V--------DSVAIHYRGA--KGRLA----LEVFHFGPDRRVVKALAHY 120 (122)
T ss_dssp EEE-------------C--------------S--------SEEEEEEECG--GGCEE----EEEEEECTTSSEEEEEEEE
T ss_pred EEe-------------c--------------C--------cEEEEEEECC--CCCEE----EEEEEECCCCcEEEEEEEe
Confidence 532 1 0 3466666543 22222 7889998889999999999
Q ss_pred c
Q 025542 234 N 234 (251)
Q Consensus 234 D 234 (251)
+
T Consensus 121 ~ 121 (122)
T 3h3h_A 121 A 121 (122)
T ss_dssp C
T ss_pred c
Confidence 7
No 24
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=99.12 E-value=7.1e-10 Score=86.11 Aligned_cols=118 Identities=15% Similarity=0.193 Sum_probs=81.7
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCC-ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRR 168 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~ 168 (251)
.+.+++.|+.. ..++ ...++|++||.|..|. ..+.|++.+++.++.+...+. ..+..+....
T Consensus 11 ~~~v~~~~~a~--~~~D~~~~~~l~a~D~~~~~p~~~~~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~---------- 75 (140)
T 3i0y_A 11 TGLVQAYYEAF--NRGDWDAMLAFLAEDVAHDLNQGPREIGRAAFASFLQRMNDSYR---EQLRDIVVTA---------- 75 (140)
T ss_dssp HHHHHHHHHHH--HHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHEE---EEEEEEEEEE----------
T ss_pred HHHHHHHHHHH--HcCCHHHHHHHcCCcEEEEcCCCCceEcHHHHHHHHHHHhhhcc---hhhhheeeee----------
Confidence 45555666533 4566 6789999999999984 679999999999888754432 2333332110
Q ss_pred ccccccccccccCCCceeeccceeeEEEEEEEEee--C-----CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHh
Q 025542 169 EGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLK--L-----PWKPLISIDGSTVYELNDELKITRHAESWNVSALEAV 241 (251)
Q Consensus 169 e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk--L-----Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al 241 (251)
.+.|+.+ .++|++++.+. + |-+..+.+.|++.++++ +|||++|++|||... .+
T Consensus 76 ----------~~~gd~v-------~~~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~~-dGkI~~~~~y~D~~~--~~ 135 (140)
T 3i0y_A 76 ----------NDEGTRV-------GAEYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDVR-DGQITRVTNYYNLQE--WI 135 (140)
T ss_dssp ----------CTTSSEE-------EEEEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEEE-TTEEEEEEEEECHHH--HH
T ss_pred ----------cccCCEE-------EEEEEEEEEeecccCCCcCCCCCEEEEEeeEEEEEE-CCEEEEEEEEcCHHH--HH
Confidence 0112223 38999999985 2 33446789999999998 599999999999654 45
Q ss_pred hhh
Q 025542 242 GQI 244 (251)
Q Consensus 242 ~Q~ 244 (251)
+|+
T Consensus 136 ~Ql 138 (140)
T 3i0y_A 136 AQV 138 (140)
T ss_dssp HHH
T ss_pred Hhh
Confidence 554
No 25
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=99.09 E-value=2.3e-10 Score=93.11 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=78.6
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCc------cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI------RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSL 163 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~------~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~ 163 (251)
.+.+++.|+.. ..++ .+.++|++||+|.+|.. .++|+++++++++.+...+... +..+....
T Consensus 26 ~~~v~~~~~a~--~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~~~---~~~~~~~~----- 95 (163)
T 1z1s_A 26 KEILVHSLRLL--ENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTVR---FTDVQFYE----- 95 (163)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEEEE---ECCCEEEC-----
T ss_pred HHHHHHHHHHH--HCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHHHhCccc---eeeeEEEE-----
Confidence 34445555533 4566 77899999999999954 4899999999998887655432 22221100
Q ss_pred hccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 164 MVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 164 ~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
.+.|+.+. +.|++++.++-. +..+.+.|++.+++++ |||++|++|||...
T Consensus 96 ---------------~~~g~~vv-------~~~~~~g~~~~t-G~~~~~~~~~v~~v~d-GkI~~~~~y~D~~~ 145 (163)
T 1z1s_A 96 ---------------TADPDLAI-------GEFHGDGVATVS-GGKLAQDYISVLRTRD-GQILLYRDFWNPLR 145 (163)
T ss_dssp ---------------CSSTTEEE-------EEEEEEEEETTT-CCEEEEEEEEEEEEET-TEEEEEEEEECHHH
T ss_pred ---------------EeCCCEEE-------EEEEEEEEEeCC-CCEEccceEEEEEecC-CEEEEEEeecCHHH
Confidence 01222233 899999987533 3458999999999986 99999999999754
No 26
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=99.09 E-value=1.5e-09 Score=87.71 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=80.8
Q ss_pred HHHHHHhhhhhcccCC--ccccccccceeeeCCC-ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccc
Q 025542 93 TILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRRE 169 (251)
Q Consensus 93 ~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e 169 (251)
+.+++.|+.. ..++ ...++|++|++|..|. ..+.|++++++.+..+...+ ...+..+....
T Consensus 24 ~lv~~~~~a~--~~~D~~~l~~l~a~D~v~~~p~g~~~~G~e~i~~~~~~~~~~~---~~~~~~~~~~~----------- 87 (151)
T 3f7x_A 24 ELVNAYYAAF--NAGDMPAFLALLSEDVIHDINQGERQMGKARFAAFMEKMNRCY---RERLADIVVMQ----------- 87 (151)
T ss_dssp HHHHHHHHHH--HHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHE---EEEEEEEEEEE-----------
T ss_pred HHHHHHHHHH--HcCCHHHHHHhcCCCEEEECCCCCCcCCHHHHHHHHHHHHHhh---ccceeEEEEEE-----------
Confidence 3444445422 4566 6789999999998765 57999999999998886554 23333332110
Q ss_pred cccccccccccCCCceeeccceeeEEEEEEEEee-------CCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhh
Q 025542 170 GRMRGLHNSTALGGHIFLLPYLLRISLICRTYLK-------LPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVG 242 (251)
Q Consensus 170 ~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk-------LPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~ 242 (251)
.+.|+. |.++|++++.+. +|-+..+.+.|++.+++. +|||+++++|||.+ +.++
T Consensus 88 ---------~~~gd~-------v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~~-dGkI~~~~~y~D~~--~~l~ 148 (151)
T 3f7x_A 88 ---------NADGSR-------AAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYIH-CGKIARVTNYYNLN--DWVE 148 (151)
T ss_dssp ---------CTTSSE-------EEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEEE-TTEEEEEEEEECHH--HHHH
T ss_pred ---------ecCCCE-------EEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEEE-CCEEEEEEEECCHH--HHHH
Confidence 012222 339999999963 244557889999999998 59999999999975 4455
Q ss_pred hh
Q 025542 243 QI 244 (251)
Q Consensus 243 Q~ 244 (251)
|+
T Consensus 149 Ql 150 (151)
T 3f7x_A 149 QV 150 (151)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 27
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=99.02 E-value=5.6e-09 Score=85.97 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=79.5
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGR 167 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~ 167 (251)
.+.+++.++.. .+|+ .+.++|++||+|.||.. .++|.+++.+++..+...+ +.|.++....
T Consensus 23 ~~~l~~f~~a~--~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~~~~~--~~f~~~~~~~----------- 87 (148)
T 3f8x_A 23 QSGLQEWHRII--AEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAVFSVL--ENFQYARHFS----------- 87 (148)
T ss_dssp HHHHHHHHHHH--HHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHC--EEEEEEEEEE-----------
T ss_pred HHHHHHHHHHH--HcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhC--CCEEEEEEEE-----------
Confidence 34444444422 5676 79999999999999975 5999999999999998776 5666654332
Q ss_pred cccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCC-hhhHhhh
Q 025542 168 REGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVS-ALEAVGQ 243 (251)
Q Consensus 168 ~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~s-a~~al~Q 243 (251)
.|+.+. +.|+++. + ...+.|+..++||++|||++.+-+|+.- +..+|.+
T Consensus 88 -------------~g~~~~-------l~f~~~~------~-g~~v~Gvdvl~~d~dGkI~~~~~~~~P~~~~~~l~~ 137 (148)
T 3f8x_A 88 -------------SKSGYV-------LEFNANM------G-DELLTGVDLIEFNDAGKITDLVVMMRPASVVIDLSV 137 (148)
T ss_dssp -------------CSSEEE-------EEEEEEE------T-TEEEEEEEEEEECTTSCEEEEEEEEECHHHHHHHHH
T ss_pred -------------eCCeEE-------EEEEEEE------C-CEEEEEEEEEEECCCCcEEEEEEEEchHHHHHHHHH
Confidence 122333 6677552 1 2578999999999999999999999973 4444433
No 28
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=98.98 E-value=2.8e-09 Score=86.36 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=76.9
Q ss_pred ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccccccccccccccCCCceeec
Q 025542 109 FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTALGGHIFLL 188 (251)
Q Consensus 109 ~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~ 188 (251)
.+.++|+||+++..|...++|+++++..+..+...+.+.++.++.....+ .|+...
T Consensus 27 ~l~~Lfa~Dav~~~~~~~~~G~~ai~~F~~~~~~a~~~~~~~~~~~v~~~----------------------~gd~~~-- 82 (131)
T 3er7_A 27 DLISLFSDEITFVLNGQEQHGIDAWKQFVRMVFTANQDIKHMYAGWVPSE----------------------TGDTME-- 82 (131)
T ss_dssp HHHHTEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEEEEEEECCCEECS----------------------STTCEE--
T ss_pred HHHHHhCCCeEecCCCCCcCChHHHHHHHHHHHhhCcCceEEEEEEEEec----------------------CCCEEE--
Confidence 67888999999966677789999999999998777766666554433211 122233
Q ss_pred cceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhhhh
Q 025542 189 PYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVGQI 244 (251)
Q Consensus 189 p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~Q~ 244 (251)
++|++++.++ -+..+.++|++.++|+++|||++++-++|..+. |+|+
T Consensus 83 -----~~w~~~g~~~--~G~~~~~~g~dv~~fd~dGkI~~~~~~~d~~~~--~~q~ 129 (131)
T 3er7_A 83 -----TRWAVCGKSA--DGSVFTQDGTDIARLNADGKIVYLANVPDDTAM--FNQY 129 (131)
T ss_dssp -----EEEEEEEEET--TSCEEEEEEEEEEEECTTSCEEEEEEEECCC--------
T ss_pred -----EEEEEEEEEC--CCCEEEEeeeEEEEEcCCCcEEEEEEccChHHH--HHHh
Confidence 9999999954 566899999999999988999999999998765 5554
No 29
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=98.98 E-value=8.8e-09 Score=81.09 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC-ccccChHHHHHHHHHhhccccCc-eEEEeeeeEeeeeehhh
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-IRFRGTELYSRNLRLLVPFFEYP-SIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-~~f~Gld~y~~~~~~L~~~~~~~-~f~l~~~e~~~~~~~~~ 164 (251)
++..+.+++.|+.. ..++ .+.++|++|++|.||- ..++|++.+++++..+...+. . ++++.++..
T Consensus 22 ~~~~~~v~~~~~a~--~~~D~~~l~~l~a~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~-------- 90 (149)
T 1nww_A 22 TPDEKIVLEFMDAL--TSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMS-IDAVETFHIGS-------- 90 (149)
T ss_dssp SHHHHHHHHHHHHG--GGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHHHHEE-EEEEEEEEEEE--------
T ss_pred cCHHHHHHHHHHHH--hcCCHHHHHHHhCCCEEEEcCCCCCccCHHHHHHHHHHHHhhCC-cceEEEEEEEe--------
Confidence 34455555556543 5677 6789999999999985 578999999999998876654 3 444433321
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSAL 238 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~ 238 (251)
.|+... +.|+.++.++ |-+..+.+.+++.+++++ |||+++++|||....
T Consensus 91 ----------------~gd~v~-------~~~~~~~~~~-~~G~~~~~~~~~~~~~~d-GkI~~~~~~~d~~~l 139 (149)
T 1nww_A 91 ----------------SNGLVY-------TERVDVLRAL-PTGKSYNLSILGVFQLTE-GKITGWRDYFDLREF 139 (149)
T ss_dssp ----------------ETTEEE-------EEEEEEEEET-TTCCEEEEEEEEEEEEET-TEEEEEEEECCHHHH
T ss_pred ----------------cCCEEE-------EEEEEEEEEc-CCCCEEEEeeEEEEEEeC-CEEEEEehhcCHHHH
Confidence 112222 7787777663 344567899999999986 999999999997543
No 30
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=98.98 E-value=4.1e-09 Score=85.24 Aligned_cols=116 Identities=13% Similarity=0.096 Sum_probs=79.5
Q ss_pred HHHHHhhhhhcccCC--ccccccccceeee-CCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccccc
Q 025542 94 ILRSDYENAYFVTGI--FTSEIYAEDCIFE-DPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREG 170 (251)
Q Consensus 94 ~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~-DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~ 170 (251)
.+++.|+.. ..++ ...++|++||.+. +|...++|++++++.+..+...+.. .+.++.... .
T Consensus 23 ~v~~~~~a~--n~~D~~~l~~l~a~D~v~~~~~~~~~~G~e~i~~~~~~~~~~~~~---~~~~~~~~~-----------~ 86 (150)
T 3f8h_A 23 TIARYFDAF--NAGDTDGMLACLSEDVAHHVNEGNIRVGKEKFAAFCAHMSHCYKE---ELTDMVIFA-----------T 86 (150)
T ss_dssp HHHHHHHHH--HHTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEE---EEEEEEEEE-----------C
T ss_pred HHHHHHHHH--HccCHHHHHHHcCCCeEEeCCCCcceeCHHHHHHHHHHHHHhCCc---cccceEEEE-----------e
Confidence 344444322 4566 6789999999963 4567899999999999988766643 233332110 0
Q ss_pred ccccccccccCCCceeeccceeeEEEEEEEEee--C-----CCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhhHhhh
Q 025542 171 RMRGLHNSTALGGHIFLLPYLLRISLICRTYLK--L-----PWKPLISIDGSTVYELNDELKITRHAESWNVSALEAVGQ 243 (251)
Q Consensus 171 ~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lk--L-----Pw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~al~Q 243 (251)
+.|+ .|.++|+|++.+. + |-+..+.+.|++.+++.+ |||+++++|||... .++|
T Consensus 87 ---------~~gd-------~v~~~~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~~d-GkI~~~~~y~D~~~--~~~Q 147 (150)
T 3f8h_A 87 ---------PDAT-------RAAAEYTVNGTYLATDEGLPEARQQSYKLPAGSFFDLRD-GLITRVTTYYNLSD--WIKQ 147 (150)
T ss_dssp ---------TTSS-------EEEEEEEEEEEECSCCTTSCCCSSEEEEEEEEEEEEEET-TEEEEEEEEECHHH--HHHH
T ss_pred ---------cCCC-------EEEEEEEEEEEEecCCCCCcCCCCCEEEEeeeEEEEEeC-CEEEEEEEECCHHH--HHHH
Confidence 1122 2339999999985 2 344478899999999985 99999999999754 4444
Q ss_pred h
Q 025542 244 I 244 (251)
Q Consensus 244 ~ 244 (251)
+
T Consensus 148 l 148 (150)
T 3f8h_A 148 V 148 (150)
T ss_dssp H
T ss_pred h
Confidence 3
No 31
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=98.95 E-value=3.5e-09 Score=82.83 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=77.5
Q ss_pred HHHHHHHHhhhhhcccCC--ccccccccceeeeCCC---c---cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeeh
Q 025542 91 IVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT---I---RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVS 162 (251)
Q Consensus 91 ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~---~---~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~ 162 (251)
..+.+++.|+.. ..++ .+.++|++||+|.+|. . .++|++++++++..+...+.. +.+.......
T Consensus 12 ~~~~v~~~~~a~--~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~~--~~~~~~~~~~---- 83 (150)
T 1s5a_A 12 ACETLRKFMAYM--LEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHL--SSFTAPTVYR---- 83 (150)
T ss_dssp HHHHHHHHHHHH--HTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEEE--EEECCCEEEE----
T ss_pred HHHHHHHHHHHH--hcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhhhcCCc--ccceeEEEEE----
Confidence 344555555532 5666 6789999999999984 2 589999999999888665543 2221111000
Q ss_pred hhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 163 LMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
...|+.+. +.|++++.++- -+..+.+.++..+++. +|||+++++|||..+
T Consensus 84 ----------------~~~gd~v~-------~~~~~~~~~~~-~G~~~~~~~~~~~~~~-dGkI~~~~~~~d~~~ 133 (150)
T 1s5a_A 84 ----------------SADSNTVI-------AEFQCDGHVIE-TGLPYRQSYISVIETR-DGRIVRYRDYWNPLV 133 (150)
T ss_dssp ----------------BSSSSEEE-------EEEEEEEEETT-TCCBCCCEEEEEEEEE-TTEEEEEEEEECHHH
T ss_pred ----------------ecCCCEEE-------EEEEEEEEEcC-CCCEEEEEEEEEEEEe-CCEEEEEEEeeChHH
Confidence 01222233 89999988653 3345678999999995 599999999999754
No 32
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=98.92 E-value=2e-09 Score=83.33 Aligned_cols=115 Identities=13% Similarity=0.113 Sum_probs=82.4
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCC-----ccccChHHHHH-HHHHhhccccCceEEEeeeeEeeeeehh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-----IRFRGTELYSR-NLRLLVPFFEYPSIGLQNIEKFVFLVSL 163 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-----~~f~Gld~y~~-~~~~L~~~~~~~~f~l~~~e~~~~~~~~ 163 (251)
.+.+++.|+.. ..|+ ...++|++||.|.+|. ..++|++++.+ .+..|...+.+.++++.++...
T Consensus 7 ~~~v~~~~~a~--~~~D~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 78 (134)
T 3grd_A 7 LEIIRSTYEGS--ASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLGSEWNDYKASVNMYHEV------ 78 (134)
T ss_dssp HHHHHTTTSSC--HHHHHHHHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHHHHHEEEEEEEEEEEEEB------
T ss_pred HHHHHHHHHHH--hcCCHHHHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHHHhhccccccchhheeee------
Confidence 45666666642 4565 6789999999999985 36799999985 7888877776555655544110
Q ss_pred hccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhh
Q 025542 164 MVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALE 239 (251)
Q Consensus 164 ~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~ 239 (251)
+.|+. |.+.|++++.++ |-+..+.+.++..+++. +|||+++++|||..+..
T Consensus 79 ----------------~~gd~-------v~v~~~~~~~~~-~tG~~~~~~~~~v~~~~-dGkI~~~~~y~D~~~~~ 129 (134)
T 3grd_A 79 ----------------SGKDV-------IIAEGMYSGVYK-DTGKSFEAEFVHVWQLE-NGKIVKFKQYVDSHLVR 129 (134)
T ss_dssp ----------------TTSSE-------EEEEEEEEEEET-TTCCEEEEEEEEEEEEE-TTEEEEEEEEECHHHHH
T ss_pred ----------------cCCCE-------EEEEEEEeeEEC-CCCCEeeeeEEEEEEEE-CCEEEEEEEEechHHHH
Confidence 01222 238899998875 34456889999999997 59999999999976543
No 33
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=98.91 E-value=1e-08 Score=82.16 Aligned_cols=111 Identities=16% Similarity=0.183 Sum_probs=78.6
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCc-----cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI-----RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~-----~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~ 164 (251)
.+.+++.|+.. ..|+ .+.++|++||+|.+|.. .++|++.+.+.+..+...+. ..+.+..+....
T Consensus 23 ~~~v~~~~~a~--~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~-~~~~~~~i~~~~------ 93 (148)
T 3g8z_A 23 IDIAKSYITAI--QTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSN-GTFAISRADDYM------ 93 (148)
T ss_dssp HHHHHHHHHHH--HHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHHTT-TCCEEEEEEEEE------
T ss_pred HHHHHHHHHHH--hcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHHHHhcC-CceEEEecceEE------
Confidence 45555666543 4666 57899999999999965 37999999999999887774 234443322100
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
+.|+.. .++|++++.. -+..+.+.|+..+++. +|||++|++|||..+
T Consensus 94 ---------------~~gd~v-------~v~~~~~~~~---~G~~~~~~~~~v~~~~-dGkI~e~~~y~D~~~ 140 (148)
T 3g8z_A 94 ---------------ASGDWV-------AITLEFSGQA---NGVTLKQAGVDLLRIE-DGKIVEVRLFSADQT 140 (148)
T ss_dssp ---------------EETTEE-------EEEEEEEEEE---TTEEEEEEEEEEEEEE-TTEEEEEEEEESCHH
T ss_pred ---------------ecCCEE-------EEEEEEEEEe---CCcEEEeeEEEEEEEE-CCEEEEEEEecCCHH
Confidence 012222 3889888863 3456788999999994 699999999999754
No 34
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=98.90 E-value=2e-08 Score=79.73 Aligned_cols=123 Identities=12% Similarity=0.137 Sum_probs=83.5
Q ss_pred HHHHHHHHHhhhhhcccCC--ccccccccceeeeCC-CccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcc
Q 025542 90 DIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDP-TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVG 166 (251)
Q Consensus 90 ~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP-~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~ 166 (251)
+..+.+++.|+.. ..|+ .+.++|++||+|.+| ...++|++.+++.+..+...+ ..++++.++..
T Consensus 16 ~~~~~v~~f~~a~--~~gD~~~l~~l~a~D~v~~~~~~~~~~G~~~i~~~~~~~~~~~-~~~~~i~~~~~---------- 82 (149)
T 2bng_A 16 EAIRAVEAFLNAL--QNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRV-GFEVKIHRIGA---------- 82 (149)
T ss_dssp HHHHHHHHHHHHH--HHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTTTTC-EEEEEEEEEEE----------
T ss_pred CHHHHHHHHHHHH--hcCCHHHHHHHcCCCEEEEeCCCCCccCHHHHHHHHHHHHhhc-CcEEEEEEEEE----------
Confidence 3455566666543 5666 678999999999954 567899999999999887655 45666655542
Q ss_pred ccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChh-----hHh
Q 025542 167 RREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSAL-----EAV 241 (251)
Q Consensus 167 ~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~-----~al 241 (251)
.|+... +.|...+.+ .+..+.+.++..|++. +|||+++++|||.... .+|
T Consensus 83 --------------~g~~vv-------~~~~~~~~~---~G~~~~~~~~~~~~v~-dGkI~~~~~y~D~~~l~~~l~~~~ 137 (149)
T 2bng_A 83 --------------DGAAVL-------TERTDALII---GPLRVQFWVCGVFEVD-DGRITLWRDYFDVYDMFKGLLRGL 137 (149)
T ss_dssp --------------ETTEEE-------EEEEEEEEE---TTEEEEEEEEEEEEEE-TTEEEEEEEECCHHHHHHHHHHHH
T ss_pred --------------eCCEEE-------EEEEEEEEE---CCeEEEEEEEEEEEEE-CCEEEEEEEEcChHHHHHHHHHHH
Confidence 112222 444433433 2345789999999996 5999999999998642 355
Q ss_pred hhhcCCCCC
Q 025542 242 GQIFTPGDR 250 (251)
Q Consensus 242 ~Q~~~p~~r 250 (251)
+-++.|.-|
T Consensus 138 ~~~~~~~~~ 146 (149)
T 2bng_A 138 VALVVPSLK 146 (149)
T ss_dssp HHTTSCC--
T ss_pred Hhhhccccc
Confidence 566777765
No 35
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=98.84 E-value=4.4e-08 Score=78.29 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCcc-----ccChHHHHHHHHHhhcccc-CceEEEeeeeEeee
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIR-----FRGTELYSRNLRLLVPFFE-YPSIGLQNIEKFVF 159 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~-----f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~~~~ 159 (251)
.++..+.+++.|+.. ..|+ .+.++|++||.|.+|... ++|++++++.+..+..+.+ ..++++..+..
T Consensus 28 ~~~~~~~v~~~~~a~--~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~i~~~~~--- 102 (156)
T 1tuh_A 28 AEQNAETVRRGYAAF--NSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLLHVLK--- 102 (156)
T ss_dssp HHHHHHHHHHHHHHH--HHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHTTTTCCEEEEEEEEE---
T ss_pred cchHHHHHHHHHHHH--hCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHHHhhcCCceEEEEEEEEE---
Confidence 344566667777633 5677 668999999999999753 6999999999998876654 45566655532
Q ss_pred eehhhccccccccccccccccCCC-ceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 160 LVSLMVGRREGRMRGLHNSTALGG-HIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 160 ~~~~~~~~~e~~~~~~~~~~~~~g-~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
.|+ .+. +.|++ +.++ -+..+.+.++..|++. +|||+++++|||...
T Consensus 103 ---------------------~gd~~v~-------~~~~~-~~~~--~G~~~~~~~~~~~~~~-dGkI~~~~~~~D~~~ 149 (156)
T 1tuh_A 103 ---------------------SDDGRVI-------GIHRN-TAER--GGKRLDVGCCIVFEFK-NGRVIDGREHFYDLY 149 (156)
T ss_dssp ---------------------CTTSCEE-------EEEEE-EEEE--TTEEEEEEEEEEEEEE-TTEEEEEEEEESSHH
T ss_pred ---------------------cCCCEEE-------EEEEE-EEec--CCcEEeeeeEEEEEEE-CCEEEEEEEecCCHH
Confidence 122 233 78888 5543 4556789999999996 599999999999754
No 36
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=98.83 E-value=2.7e-08 Score=83.32 Aligned_cols=120 Identities=12% Similarity=0.058 Sum_probs=89.8
Q ss_pred ccCCHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC----ccccChHHHHHHHHHhhccccCceEEEeeeeEe
Q 025542 84 LVSGIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT----IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKF 157 (251)
Q Consensus 84 ~~~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~----~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~ 157 (251)
+.++.+...+.|++.|+.. ..|| .+.++|++||+|.+|- ..++|+++++..|..+...+ +.++.+..+...
T Consensus 5 ~~Ms~~~~~~~v~ry~~A~--n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~~~~-d~~~~~e~i~v~ 81 (156)
T 3g16_A 5 PTLSRAAMEKVIRTYYDGC--NEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAVETL-GSYWTIDALVID 81 (156)
T ss_dssp CCCCHHHHHHHHHHHHHHH--HTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHHHHH-CEEEEEEEEEEE
T ss_pred ccccchhHHHHHHHHHHHH--HcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHHhhc-CceEEEEEEEEe
Confidence 4567778888888888844 6888 7899999999999765 25799999999999887766 345555444321
Q ss_pred eeeehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcC-CCCEEEEEEeccCC
Q 025542 158 VFLVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELND-ELKITRHAESWNVS 236 (251)
Q Consensus 158 ~~~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~-~GkI~~H~DyWD~s 236 (251)
..|..+. +.|+|++..+ -+.+.|+..|.|+. +|||+++++||+..
T Consensus 82 ----------------------~dG~~av-------~Ewt~~~T~~-----g~~~~~~~~f~f~~~DGKI~~~r~Y~~~~ 127 (156)
T 3g16_A 82 ----------------------AETAEAA-------IEWTHFKTNQ-----DKVLRGAECVEFDRASGLIREIRAFYASP 127 (156)
T ss_dssp ----------------------TTTTEEE-------EEEEEEEGGG-----TEEEEEEEEEEEETTTTEEEEEEEEESCC
T ss_pred ----------------------cCCCEEE-------EEEEEEEeCC-----CeeEecceEEEEEecCCEEEEEeeecCCc
Confidence 0122333 8999997643 27789999999974 59999999999987
Q ss_pred hhhH
Q 025542 237 ALEA 240 (251)
Q Consensus 237 a~~a 240 (251)
+...
T Consensus 128 ~~~~ 131 (156)
T 3g16_A 128 QAEG 131 (156)
T ss_dssp CCTT
T ss_pred cccC
Confidence 6544
No 37
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=98.65 E-value=4.7e-07 Score=77.95 Aligned_cols=99 Identities=14% Similarity=0.022 Sum_probs=74.1
Q ss_pred ccccccccceeeeCCCcc------ccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccccccccccccccCC
Q 025542 109 FTSEIYAEDCIFEDPTIR------FRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTALG 182 (251)
Q Consensus 109 ~~~~iY~eD~~F~DP~~~------f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~ 182 (251)
...++|++|+.+..|+.. ++|++++.+++..+...+....+....+... .|
T Consensus 60 ~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d~~~~~~~v~~t-----------------------aD 116 (185)
T 3jum_A 60 KRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFET-----------------------QD 116 (185)
T ss_dssp GGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTTCEEEEEEEECC-----------------------SS
T ss_pred HHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCCCeeeEEEEEEe-----------------------cC
Confidence 578999999999988654 8999999999998887776544433222210 11
Q ss_pred CceeeccceeeEEEEEEEEeeCCCCC--eeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 183 GHIFLLPYLLRISLICRTYLKLPWKP--LISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 183 g~~~i~p~~v~~~Wrm~~~lkLPw~P--~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+.|.+.|+.++...-..+| ......+..+++.+ |||++++||||.-+
T Consensus 117 ------pd~VvvE~~~~Gtv~~TGkp~~~Y~~~yi~V~rVrD-GKIv~~ReY~Dpl~ 166 (185)
T 3jum_A 117 ------PNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFEN-GLIKEQREFMNPCE 166 (185)
T ss_dssp ------TTEEEEEEEEEEEECCTTSCCEEEEEEEEEEEEEET-TEEEEEEEEECHHH
T ss_pred ------CCEEEEEEEEEEEEcCCCCccceEEEeEEEEEEEEC-CEEEEEEEecCHHH
Confidence 33344889888877656666 46788899999985 99999999999754
No 38
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=98.59 E-value=4.1e-07 Score=69.58 Aligned_cols=107 Identities=9% Similarity=-0.093 Sum_probs=73.8
Q ss_pred HHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccc
Q 025542 93 TILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRR 168 (251)
Q Consensus 93 ~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~ 168 (251)
+.+++.|+.. ..++ ...++|++|+.+.||-. .++|.+++++.++.++.. .+.++++.+...
T Consensus 7 ~~v~~~~~a~--n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~~~~-~~~~~~~~~~~~------------ 71 (123)
T 2k54_A 7 LPVQKQLEAY--NARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKE-PDLYGELLTRVI------------ 71 (123)
T ss_dssp HHHHHHHHHH--HHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHHTTC-TTCEEEEEEEEE------------
T ss_pred HHHHHHHHHH--HhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHHcCC-CCcEEEEEEEEE------------
Confidence 3344444422 4566 57799999999998754 589999999999988655 344555544432
Q ss_pred ccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 169 EGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 169 e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
+ | +.|.+.|++++..+ .+ ...+.++..|++. +|||++|.+|||...
T Consensus 72 -~-----------g-------d~v~~~~~~~g~~~--~~-~~~~~~~~vf~v~-dGkI~~~~~~~d~~~ 117 (123)
T 2k54_A 72 -V-----------G-------NVVIDHETVTRNFP--EG-KGEVDVACIYEVE-NGRIAKAWFKIGEPR 117 (123)
T ss_dssp -E-----------T-------TEEEEEEEEECCBT--TB-CCEEEEEEEEEEE-TTEEEEEEEEEEEEE
T ss_pred -E-----------C-------CEEEEEEEEEeECC--CC-ceEEEEEEEEEEE-CCEEEEEEEEcCChh
Confidence 1 1 12337888877532 22 2378999999995 599999999998754
No 39
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=98.58 E-value=2.9e-06 Score=63.96 Aligned_cols=119 Identities=13% Similarity=0.163 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC-ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhh
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT-IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~-~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~ 164 (251)
+.+.++.+.+.|... |.+++ .+.++|++|+.|.+|. ..++|++++++++..+... ..+.+.++..+...
T Consensus 4 ~~~~I~~~~~~~~~a-~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~-~~~~~~~~~~~v~~------ 75 (129)
T 3hx8_A 4 AKEAIEAANADFVKA-YNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDM-GISELKLTTLDVQE------ 75 (129)
T ss_dssp HHHHHHHHHHHHHHH-HHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHT-TCEEEEEEEEEEEE------
T ss_pred HHHHHHHHHHHHHHH-HHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhC-CCceEEEEEEEEEc------
Confidence 344455555555543 46777 6789999999999996 4589999999999887653 11344444333211
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEE--EEEcCCCCEEEEEEeccCCh
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTV--YELNDELKITRHAESWNVSA 237 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~--~~fd~~GkI~~H~DyWD~sa 237 (251)
.|+.+++ +..|+|++ ..+-+..+.+.|..+ |+..++|+..-+.|+|+...
T Consensus 76 ----------------~gd~A~~-----~~~~~~~~--~~~~G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~~~~ 127 (129)
T 3hx8_A 76 ----------------SGDFAFE-----SGSFSLKA--PGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDP 127 (129)
T ss_dssp ----------------ETTEEEE-----EEEEEEEE--ECTTSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred ----------------CCCEEEE-----EEEEEEEe--eCCCCCeeeeeEEEEEEEEECCCCcEEEEEeeccccc
Confidence 2233442 25565554 344555566667654 55554799999999998753
No 40
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=98.47 E-value=3.1e-06 Score=67.24 Aligned_cols=112 Identities=13% Similarity=0.016 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc----cccChHHHHHHHHHhhccccC-ceEE-EeeeeEeee
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI----RFRGTELYSRNLRLLVPFFEY-PSIG-LQNIEKFVF 159 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~----~f~Gld~y~~~~~~L~~~~~~-~~f~-l~~~e~~~~ 159 (251)
++.+.+.+.++|+.. .+|+ -+.+++++|+.+..|-. .++|.+++.+.+..|...+.. ..+. ++.+..
T Consensus 11 ~~~~~~~~~~f~~A~--~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~--- 85 (134)
T 3dmc_A 11 LKVAHQGFEFFTQGL--ATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLDRVTS--- 85 (134)
T ss_dssp HHHHHHHHHHHHHHH--HHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEEEEEE---
T ss_pred HHHHHHHHHHHHHHH--HcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHHHhhcCCceeEEEEEEEe---
Confidence 344455555566543 5777 68899999999999987 689999999999999877652 3444 444432
Q ss_pred eehhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCC
Q 025542 160 LVSLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVS 236 (251)
Q Consensus 160 ~~~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~s 236 (251)
+|+.+ .+.|+..+.++ . .......+..+++.+ |||++.+||||.-
T Consensus 86 ---------------------~G~~v-------vve~~~~g~~~--g-~~y~~~~~~~f~v~d-GkI~~~r~Y~d~~ 130 (134)
T 3dmc_A 86 ---------------------NETTV-------VFEFRDEGLFL--G-KPYKNRVAVSFDVRG-DKICSYREYFGSD 130 (134)
T ss_dssp ---------------------CSSEE-------EEEEEEEEEET--T-EEEEEEEEEEEEEET-TEEEEEEEEECSC
T ss_pred ---------------------cCCEE-------EEEEEEEEEEc--C-cEeeccEEEEEEEEC-CEEEEEEEEECCC
Confidence 12222 27888888764 3 345677788899975 9999999999974
No 41
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=98.40 E-value=2.9e-06 Score=66.91 Aligned_cols=104 Identities=14% Similarity=0.173 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc--cccChHHHHHHHHHhhccccCce-EEEeeeeEeeeeeh
Q 025542 88 IDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI--RFRGTELYSRNLRLLVPFFEYPS-IGLQNIEKFVFLVS 162 (251)
Q Consensus 88 ~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~--~f~Gld~y~~~~~~L~~~~~~~~-f~l~~~e~~~~~~~ 162 (251)
.++..+.+++.|+.+ ..|+ ...++|++|+.+.+|.. .++|+++|.+.+..+- .... +++..+..
T Consensus 4 ~~~~~~~v~~~~~a~--~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~~---~~~~~~~i~~~~a------ 72 (128)
T 3en8_A 4 EEKIREALNAHWQAS--AAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHP---GKPAGFEVRRIQG------ 72 (128)
T ss_dssp HHHHHHHHHHHHHHH--HHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTT---CSCSEEEEEEEEE------
T ss_pred HHHHHHHHHHHHHHH--HcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHCC---CCCcceEEEEEEE------
Confidence 344556666666533 5677 68899999999999963 5899999998765542 2222 66655532
Q ss_pred hhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccC
Q 025542 163 LMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNV 235 (251)
Q Consensus 163 ~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~ 235 (251)
.|+.+. +.|+.+. .+ ..+.++..+++. +|||+++++|||-
T Consensus 73 ------------------~G~~vv-------~~~~~~~-----~g--~~~~~~~v~~v~-dGkI~~~~~y~~~ 112 (128)
T 3en8_A 73 ------------------EGNLWI-------TEYSISY-----NG--RPAYTVSIMEFR-NGKVVHETQYFSD 112 (128)
T ss_dssp ------------------ETTEEE-------EEEEEEE-----TT--EEEEEEEEEEEE-TTEEEEEEEEEEC
T ss_pred ------------------CCCEEE-------EEEEEec-----CC--EEEEEEEEEEEc-CCEEEEEEEeCCC
Confidence 223333 6666542 11 578889999998 5999999999995
No 42
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=5.6e-06 Score=67.02 Aligned_cols=108 Identities=7% Similarity=-0.023 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcc
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVG 166 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~ 166 (251)
++-.+.+++.|+.. |..++ ...++|++|+++-+|.. ..|++.+++.++.|...+.+.++++..+..
T Consensus 27 ~~nk~lV~~f~~~a-~~~~D~~~~~~~~a~D~v~h~P~~-~~G~e~~~~~~~~~~~~~pd~~~~i~~iia---------- 94 (148)
T 3g0k_A 27 QANHDLVIEMYNKV-LIAMDSSAVDRYIAPGYVQHSSLA-EPSVEALKGFLDRVRAESPDARQTIHRSFV---------- 94 (148)
T ss_dssp HHHHHHHHHHHHHT-TTTTCGGGGGGTEEEEEEECCSSS-CSSHHHHHHHHHHHHHHCCSCEEEEEEEEE----------
T ss_pred HHHHHHHHHHHHHH-HhcCCHHHHHHhcCcCeEEcCCCC-CCCHHHHHHHHHHHHHhCCCceEEEEEEEE----------
Confidence 44466777777744 24566 67899999999999965 599999999999998777777787776653
Q ss_pred ccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccC
Q 025542 167 RREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNV 235 (251)
Q Consensus 167 ~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~ 235 (251)
+ |+ .|.++|++++ .|.+ ..+.|+..|+|. +|||++|-|.++.
T Consensus 95 ---e-----------GD-------~V~~~~~~~~---~~~g--~~~~~~difr~~-dGkIvEhWd~~q~ 136 (148)
T 3g0k_A 95 ---D-----------GD-------HVITHTHVER---WPGD--AGLAVVDIFRVE-GGMIVEHWDVIQD 136 (148)
T ss_dssp ---E-----------TT-------EEEEEEEEEC---STTC--CCEEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred ---E-----------CC-------EEEEEEEEEE---CCCC--ccEEEEEEEEEE-CCEEEEEcccccc
Confidence 1 11 2338999874 2333 357899999998 5999998666654
No 43
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=98.35 E-value=1e-05 Score=68.29 Aligned_cols=99 Identities=23% Similarity=0.227 Sum_probs=72.2
Q ss_pred cccccccccee---ee-CC--CccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccccccccccccccCC
Q 025542 109 FTSEIYAEDCI---FE-DP--TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTALG 182 (251)
Q Consensus 109 ~~~~iY~eD~~---F~-DP--~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~ 182 (251)
...++|++|++ +. +| -..++|++++.+++..+...+..- .+..+.... . .|
T Consensus 38 ~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~~~--~~~~~~i~~-----------t----------~D 94 (163)
T 3ff0_A 38 RRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDW--EWYNIKVFE-----------T----------DD 94 (163)
T ss_dssp GGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHSTTC--EEEEEEEEE-----------B----------SS
T ss_pred HHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCCCc--eeeeEEEEE-----------c----------CC
Confidence 57999999999 87 32 234899999999999887777553 333333211 1 11
Q ss_pred CceeeccceeeEEEEEEEEeeCCCCC--eeEEEEEEEEEEcCCCCEEEEEEeccCCh
Q 025542 183 GHIFLLPYLLRISLICRTYLKLPWKP--LISIDGSTVYELNDELKITRHAESWNVSA 237 (251)
Q Consensus 183 g~~~i~p~~v~~~Wrm~~~lkLPw~P--~i~v~G~T~~~fd~~GkI~~H~DyWD~sa 237 (251)
|+.|-+.|++.+.++-+.+| ......+..+++.+ |||++++||||.-+
T Consensus 95 ------pd~vvvE~~~~g~i~~tG~~~~~y~~~yi~v~~vrd-GkI~~~ReY~dp~~ 144 (163)
T 3ff0_A 95 ------PNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDD-GKIKRNREFMNVFQ 144 (163)
T ss_dssp ------TTEEEEEEEEEEEECCTTSCCEEEEEEEEEEEEEET-TEEEEEEEEECHHH
T ss_pred ------CCEEEEEEEEEEEEcCCCcccccEEEeEEEEEEEeC-CEEEEEEeecCHHH
Confidence 34455999999998766665 25677889999975 99999999999754
No 44
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=98.23 E-value=2.2e-05 Score=59.80 Aligned_cols=104 Identities=11% Similarity=0.035 Sum_probs=79.2
Q ss_pred HHHHHHhhhhhcccCC--ccccccccceeeeCC-CccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccc
Q 025542 93 TILRSDYENAYFVTGI--FTSEIYAEDCIFEDP-TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRRE 169 (251)
Q Consensus 93 ~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP-~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e 169 (251)
+.+++.|+.+ ..|+ ...+++++||.+.-| ...+.|.+++.+.+..|...+....++++++..
T Consensus 4 ~~v~~~~~a~--~~gD~~~~~~~ladDv~w~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~i~------------- 68 (112)
T 3f14_A 4 TTHYSIAQHF--SSGDFPAVYACFNDIIEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTNDNVIQ------------- 68 (112)
T ss_dssp HHHHHHHHHH--HTTCGGGTGGGEEEEEEEEETTTEEEESHHHHHHHHHHHHHHHHTSEEEEEEEEE-------------
T ss_pred HHHHHHHHHH--HcCCHHHHHHhcCCceEEEEcCCccEecHHHHHHHHHHHHhhcCCcEEEEEEEEE-------------
Confidence 4566666644 5677 567899999999865 456899999999999998877667888888653
Q ss_pred cccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEe
Q 025542 170 GRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAES 232 (251)
Q Consensus 170 ~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~Dy 232 (251)
+ |+. |.+.|++++..+ .+..+...++..|+|.+ |||++.++|
T Consensus 69 ~-----------Gd~-------Vvv~~~~~~~~~--~g~~~~~~~~~vf~~~d-GkI~e~~~Y 110 (112)
T 3f14_A 69 N-----------ENQ-------IVIEGKCRYFDA--EGKEAFVSYCDIYRFEN-DTIKTITSY 110 (112)
T ss_dssp C-----------SSE-------EEEEEEEEEECT--TSCEEEEEEEEEEEEET-TEEEEEEEE
T ss_pred e-----------CCE-------EEEEEEEEEEeC--CCCEEEEEEEEEEEEeC-CEEEEEEEE
Confidence 1 121 238888887643 45568899999999984 999999988
No 45
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=98.18 E-value=1.8e-05 Score=66.18 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=71.1
Q ss_pred ccCC--ccccccccceeeeCCC--ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccccccccccccccc
Q 025542 105 VTGI--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTA 180 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~ 180 (251)
.+|| .+.++|+|||+|.+|. ..+.|.++..+++..+...+. .|.++....
T Consensus 32 ~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~~~~~~--df~~~~~~v------------------------ 85 (155)
T 3flj_A 32 AKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQVFS--EFRYRRIMG------------------------ 85 (155)
T ss_dssp TTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHHEE--EEEEEEEEE------------------------
T ss_pred HhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCC--CcEEEEEEE------------------------
Confidence 4677 7899999999999994 578999999999998877664 454433221
Q ss_pred CCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccC-ChhhHhhh
Q 025542 181 LGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNV-SALEAVGQ 243 (251)
Q Consensus 181 ~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~-sa~~al~Q 243 (251)
+|+.+. +.|+.+. . ...++|+..++||++|||.+..=-++. ++..+|.+
T Consensus 86 ~G~~av-------l~f~~~~--~-----g~~v~gvd~~~fdedGkI~e~~vm~rP~k~l~al~~ 135 (155)
T 3flj_A 86 EGKDWA-------LEFQCKV--G-----ELDAVGVDLITLNEGGLIQDFEVVMRPYKTVGALRD 135 (155)
T ss_dssp ETTEEE-------EEEEEEE--T-----TEEEEEEEEEEECTTSSEEEEEEEEECHHHHHHHHH
T ss_pred cCCEEE-------EEEEEEE--C-----CEEEEEEEEEEEcCCCCEEEEEEEEChHHHHHHHHH
Confidence 122333 5555432 1 257899999999999999999888776 34444443
No 46
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.14 E-value=1e-05 Score=61.50 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCC--CccccChHHHHHHHHHhhccccCceEEEeeeeEeeeee
Q 025542 86 SGIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDP--TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLV 161 (251)
Q Consensus 86 ~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP--~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~ 161 (251)
++.+++++.+-+-|. .++ ...++|++|+.+-+| .....|++++++.++.+...+.+.+++++.+..
T Consensus 2 m~~~~~v~~~~~a~n-----~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p~~~~~i~~~~~----- 71 (117)
T 3ff2_A 2 MSNLETAKAMIAAYN-----AQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQNHAEIKDAQQ----- 71 (117)
T ss_dssp CCHHHHHHHHHHHHH-----TTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCTTCEEEEEEEEE-----
T ss_pred cCHHHHHHHHHHHHc-----ccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCCCceEEEEEEEE-----
Confidence 344555555544443 444 456899999999998 456899999999999888776566777766643
Q ss_pred hhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCC-eeEEEEEEEEEEcCCCCEEEEE
Q 025542 162 SLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKP-LISIDGSTVYELNDELKITRHA 230 (251)
Q Consensus 162 ~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P-~i~v~G~T~~~fd~~GkI~~H~ 230 (251)
+ |+ .|.++|++++...-..+| ...+.++..|++. +|||++|-
T Consensus 72 --------~-----------Gd-------~V~~~~~~~~~~~~~G~~~~~~~~~~~ifr~~-dGkI~e~W 114 (117)
T 3ff2_A 72 --------V-----------GT-------YVLMREHVTRGPATDGSPLVEPFDVVAVYSFE-GDKCSRVE 114 (117)
T ss_dssp --------E-----------TT-------EEEEEEEEECCSCSSSCCCCCCEEEEEEEEEE-TTEEEEEE
T ss_pred --------E-----------CC-------EEEEEEEEEecCCCCCCcccccEEEEEEEEEE-CCEEEEEE
Confidence 1 11 233788887652111332 1567889999995 59999984
No 47
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=97.85 E-value=0.00055 Score=54.50 Aligned_cols=112 Identities=13% Similarity=0.056 Sum_probs=66.2
Q ss_pred HHHHHHHHhhhhhcccCC--ccccccccceeeeCCC--ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcc
Q 025542 91 IVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVG 166 (251)
Q Consensus 91 ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~ 166 (251)
.+..+.+.|.+. +.++| .+.++|++|+.|.||. ..++|++.++.++..++.......+..+.++.
T Consensus 21 ~I~~~~~~~~~A-~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i~~---------- 89 (156)
T 3h51_A 21 EVAALFDTWNAA-LATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRL---------- 89 (156)
T ss_dssp HHHHHHHHHHHH-HHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEEEE----------
T ss_pred HHHHHHHHHHHH-HHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEEEE----------
Confidence 344444444433 36787 7889999999999976 35799999999999887654333344443331
Q ss_pred ccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEc-CCC--CEEEEEEec
Q 025542 167 RREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELN-DEL--KITRHAESW 233 (251)
Q Consensus 167 ~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd-~~G--kI~~H~DyW 233 (251)
..++.++ +.|++++....+-+....+.|.-++.+. .+| ||+.|--+.
T Consensus 90 -------------~~gd~A~-------~~~~~~~~~~~~~G~~~~~~~r~t~v~~r~dG~WkIv~~H~S~ 139 (156)
T 3h51_A 90 -------------LDDDSAV-------DAGVYTFTLTDKNGKKSDVQARYTFVYEKRDGKWLIINHHSSA 139 (156)
T ss_dssp -------------CSSSEEE-------EEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred -------------ecCCeEE-------EEEEEEEEEEcCCCCeEEEEeEEEEEEEEECCEEEEEEEeecC
Confidence 0123344 5555555544333434556666554442 246 777664443
No 48
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=97.77 E-value=0.00069 Score=54.83 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=68.2
Q ss_pred ccCC--ccccccccceeeeCCCcc--ccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhcccccccccccccccc
Q 025542 105 VTGI--FTSEIYAEDCIFEDPTIR--FRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTA 180 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~~~--f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~ 180 (251)
.+|+ ...++|++|+.|-||+.. ++|++.|+.+|+++... ...++++.+.....
T Consensus 28 ~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~-~~~~~ei~~p~V~v---------------------- 84 (134)
T 3ke7_A 28 ASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLP-PADHFDMIRPVVQV---------------------- 84 (134)
T ss_dssp HCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCC-CCSEEEEEEEEEEE----------------------
T ss_pred hCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccC-CcceEEEeCCeEEE----------------------
Confidence 4677 778999999999999966 99999999999986544 34578887765321
Q ss_pred CCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccC
Q 025542 181 LGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNV 235 (251)
Q Consensus 181 ~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~ 235 (251)
.|+.++ +.|.|+.... .+ ...+..+-.|+..++|+..-=-++|.+
T Consensus 85 ~gD~A~-------~~y~l~~~~~--~~-~~~~r~T~V~~r~~dG~W~ivH~H~S~ 129 (134)
T 3ke7_A 85 AQNIAV-------LTFNLDSYLS--DK-VIKWNCTEVYRRNPDNQWKIIQTHWSY 129 (134)
T ss_dssp ETTEEE-------EEEEEEEEET--TE-EEEEEEEEEEEECTTSBEEEEEEEEEE
T ss_pred eCceEE-------EEEEEEEeeC--CC-cEEEEEEEEEEEcCCCcEEEEEEeecc
Confidence 233465 8899887643 22 345666667888856754433445554
No 49
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=97.68 E-value=0.0014 Score=49.45 Aligned_cols=114 Identities=5% Similarity=-0.087 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCc-cccChHHHHHHHHHhhcccc-CceEEEeeeeEeeeeehhh
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI-RFRGTELYSRNLRLLVPFFE-YPSIGLQNIEKFVFLVSLM 164 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~-~f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~~~~~~~~~ 164 (251)
+++.+.+.+.++.. .+|+ ...++|++|+.|.+|-. .+.|++++.+.+..+...+. ...+++.++...
T Consensus 11 ~~i~~~~~~~~~a~--~~~D~~~~~~l~a~D~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~------- 81 (135)
T 3d9r_A 11 AVIEAAAIAYLTAF--NRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEVVQT------- 81 (135)
T ss_dssp HHHHHHHHHHHHHH--HTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEEEEE-------
T ss_pred HHHHHHHHHHHHHH--hcCCHHHHHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEEEEEEe-------
Confidence 33444444444433 6777 78899999999999865 46799999999988864332 233444444320
Q ss_pred ccccccccccccccccCCCceeeccceeeEEEEEEEEeeCC-CCCeeEEEEEE--EEEEcCCCCEEEEEEecc
Q 025542 165 VGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLP-WKPLISIDGST--VYELNDELKITRHAESWN 234 (251)
Q Consensus 165 ~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLP-w~P~i~v~G~T--~~~fd~~GkI~~H~DyWD 234 (251)
.|+.++ ++|.+++.+..+ -++.+...|.. .|+..++|+..-.+++|.
T Consensus 82 ----------------~gd~a~-------~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s 131 (135)
T 3d9r_A 82 ----------------SADWAF-------VRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTS 131 (135)
T ss_dssp ----------------ETTEEE-------EEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred ----------------cCCEEE-------EEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeec
Confidence 122243 777777665422 45555554543 455554687776777765
No 50
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=97.59 E-value=0.00032 Score=54.19 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=67.1
Q ss_pred HHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccccc
Q 025542 94 ILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGR 171 (251)
Q Consensus 94 ~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~ 171 (251)
.++++|+-. .+|+ .+.+++++||.|..|...+.|.+++.+.+..+.. .+.++.+..
T Consensus 11 ~v~~f~~A~--~~gD~~~l~~lla~Dvv~~~~~g~~~G~~~v~~~~~~~~~-----~~~~~~~~~--------------- 68 (114)
T 3f40_A 11 LVLEFIHAL--NTENFPAAKKRLNENFTFNGPMGHREGSERYMNDMEKMKF-----KYVVHKMFE--------------- 68 (114)
T ss_dssp HHHHHHHHH--HTTCHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHCC-----EEEEEEEEE---------------
T ss_pred HHHHHHHHH--HcCCHHHHHHhcCCCeEEECCCCcccCHHHHHHHHHHHHh-----heEEEEEEe---------------
Confidence 333444432 4677 6889999999999999999999999999988753 555555432
Q ss_pred cccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChh
Q 025542 172 MRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSAL 238 (251)
Q Consensus 172 ~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~ 238 (251)
+|+.+. +.|.... ..++ +.+...+++. +|||++...|+|..+.
T Consensus 69 ---------~G~~v~-------~~~~~~~----~g~~---~~~~~~~~v~-dGrI~~i~~~~dp~~l 111 (114)
T 3f40_A 69 ---------EGNDVC-------LIYDINM----NGKT---IAASGLYHLE-KGEITSLHVYFDPRPL 111 (114)
T ss_dssp ---------ETTEEE-------EEEEEEE----TTEE---EEEEEEEEEE-TTEEEEEEEECCCGGG
T ss_pred ---------cCCcEE-------EEEEEec----CCcE---eecceEEEEc-CCeEEEEEEEECChhh
Confidence 222233 4454332 1221 4556667776 4999999999998654
No 51
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=97.47 E-value=0.0023 Score=49.58 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=44.5
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCC--ccccChHHHHHHHHHhhcccc-CceEEEeeee
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFE-YPSIGLQNIE 155 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e 155 (251)
++.+.+.|... +.+|| ...++|++|+.+.+|. ..+.|++++++++..++..+. ...+++.++.
T Consensus 10 I~~l~~~~~~A-~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~~ 77 (142)
T 3f7s_A 10 IRQLIERWMQA-VRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLT 77 (142)
T ss_dssp HHHHHHHHHHH-HHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEEE
T ss_pred HHHHHHHHHHH-HHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeeeE
Confidence 44444444433 36788 6779999999998876 445799999999988776654 4467776654
No 52
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=97.47 E-value=0.0017 Score=50.47 Aligned_cols=65 Identities=14% Similarity=0.039 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhhhhcccCC--ccccccccceeeeCCC---ccccChHHHHHHHHHhhcccc-CceEEEeeeeE
Q 025542 90 DIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPT---IRFRGTELYSRNLRLLVPFFE-YPSIGLQNIEK 156 (251)
Q Consensus 90 ~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~---~~f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~ 156 (251)
++.+.+.+.++.. .+|| ...++|++|+.|.+|. +.++|.+.++.++..++.... ...+++.+...
T Consensus 14 ~I~~l~~~~~~A~--~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v 84 (143)
T 2ux0_A 14 EIIKITEQLIEAI--NNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHV 84 (143)
T ss_dssp HHHHHHHHHHHHH--HHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHH--HcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEE
Confidence 3444444444433 5777 7789999999999874 678999999999988865432 34667766543
No 53
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=97.41 E-value=0.0018 Score=53.75 Aligned_cols=113 Identities=19% Similarity=0.152 Sum_probs=74.6
Q ss_pred HHHHHHhhhhhcccC-C--ccccccccceeeeCCC--ccccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccc
Q 025542 93 TILRSDYENAYFVTG-I--FTSEIYAEDCIFEDPT--IRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGR 167 (251)
Q Consensus 93 ~~L~~Dy~~~Yfvtg-~--~~~~iY~eD~~F~DP~--~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~ 167 (251)
++|..-|-.. +|. + -+...|..|-+|.|-+ .+..|.+...+-++..-.-+-.-.|.+.++--++.+|
T Consensus 23 qqlA~~Yi~A--lT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH~gvLey~fnieHmfnsGsLV------ 94 (154)
T 3gzb_A 23 QQLAVKYMDA--LTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAHQGVLEYDFNIEHMYNAGSLV------ 94 (154)
T ss_dssp HHHHHHHHHH--HHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHTTTCCCCEEEEEEEEEETTEE------
T ss_pred HHHHHHHHHH--HhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHhhhheeeccChhhhccCCcEE------
Confidence 3455555433 344 2 5578999999999987 5788998887777554443334567777775443111
Q ss_pred cccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCC--ee--EEEEEEEEEEcCCC-CEEEEEEeccCC
Q 025542 168 REGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKP--LI--SIDGSTVYELNDEL-KITRHAESWNVS 236 (251)
Q Consensus 168 ~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P--~i--~v~G~T~~~fd~~G-kI~~H~DyWD~s 236 (251)
.. -...++.+...+-.+| .| .+.|.|++++|.++ ||.+|.|+||--
T Consensus 95 -----------------Vm------iGnY~~kGPg~qfgkpGkiId~aiPGVTtlklDm~~~Rv~eh~DlmDyq 145 (154)
T 3gzb_A 95 -----------------VM------IGNYHFKGPGEQFGKPGKIIDVAIPAVTSLKLDMLNRRVTEHVDLIDYQ 145 (154)
T ss_dssp -----------------EE------EEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEECHH
T ss_pred -----------------EE------EcceeecCchHHcCCCCceEEEecCceEEEeecCCccchhhhHhHHhHH
Confidence 01 1455566655432344 33 58999999999876 999999999963
No 54
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=97.40 E-value=0.0012 Score=51.65 Aligned_cols=106 Identities=10% Similarity=0.163 Sum_probs=61.5
Q ss_pred ccCC--ccccccccceee-eCCCccccChHHHHHHHHHhhccccC-ceEEEeeeeEeeeeehhhcccccccccccccccc
Q 025542 105 VTGI--FTSEIYAEDCIF-EDPTIRFRGTELYSRNLRLLVPFFEY-PSIGLQNIEKFVFLVSLMVGRREGRMRGLHNSTA 180 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F-~DP~~~f~Gld~y~~~~~~L~~~~~~-~~f~l~~~e~~~~~~~~~~~~~e~~~~~~~~~~~ 180 (251)
.+|+ ...++|++|+.| .+|-..++|++++++++..+...+.. +.+.+..+....
T Consensus 17 ~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~---------------------- 74 (142)
T 2gxf_A 17 QNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLE---------------------- 74 (142)
T ss_dssp HTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEE----------------------
T ss_pred HcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEE----------------------
Confidence 5777 688999999999 67877899999999999887665432 344443333211
Q ss_pred CCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEE--EEEcCCCC-EEEEEEeccCChhhH
Q 025542 181 LGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTV--YELNDELK-ITRHAESWNVSALEA 240 (251)
Q Consensus 181 ~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~--~~fd~~Gk-I~~H~DyWD~sa~~a 240 (251)
.|+.+. ++..|+|.+ . +-+..+.+.|..+ |+.+++|+ -+.|...|.-+..+.
T Consensus 75 ~gd~A~-----~~~~~~~~~--~-~~G~~~~~~g~~t~v~~r~~dG~Wri~~d~~~~~~~~~~ 129 (142)
T 2gxf_A 75 AGDTVL-----VLSQTLLDS--D-KKDSEYAMERRATYVFKKNAQGEWLCVIDNSYGTDLIGV 129 (142)
T ss_dssp ETTEEE-----EEEEEECCC------------EEEEEEEEEECTTSCEEEEEEETTGGGGTC-
T ss_pred cCCEEE-----EEEEEEEEE--C-CCCCeEeeeEEEEEEEEECCCCCEEEEEECCCCcccchh
Confidence 123344 337888776 2 2233456677544 44555675 345556665544443
No 55
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=97.35 E-value=0.0047 Score=49.49 Aligned_cols=113 Identities=11% Similarity=0.015 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhcccc-CceEEEeeeeEeeeeehhhc
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFE-YPSIGLQNIEKFVFLVSLMV 165 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~-~~~f~l~~~e~~~~~~~~~~ 165 (251)
+..++.|-+.|... |..|| .+.++|++|+.|..|-....|+++|.+.+......+. ...++++++..
T Consensus 16 e~aI~~l~~~~~~A-~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v--------- 85 (139)
T 3rob_A 16 ELAIRTVQYRWLEA-TRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQNDQRVIIEASATFEEIVI--------- 85 (139)
T ss_dssp HHHHHHHHHHHHHH-HHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEE---------
T ss_pred HHHHHHHHHHHHHH-HHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHHHHHhcCCCCceEEEEEEE---------
Confidence 33455555556433 46788 8899999999998775555699999998755433221 33455555543
Q ss_pred cccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEE--cCCCCEEEEEEe
Q 025542 166 GRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYEL--NDELKITRHAES 232 (251)
Q Consensus 166 ~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~f--d~~GkI~~H~Dy 232 (251)
.|+-++ ++..|++.+..+ .-++.+.+.|.....+ ..+|+-..++|.
T Consensus 86 ---------------~GD~A~-----~~~~~~~~~t~~-~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~ 133 (139)
T 3rob_A 86 ---------------VEPMAY-----TRTHLHIKVTPR-SGGAVRELAGHAMSIFRRSMFGEWQLARDA 133 (139)
T ss_dssp ---------------ETTEEE-----EEEEEEEEEEET-TSCCCEEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred ---------------cCCeEE-----EEEEEEEEEecC-CCCceeEeeccEEEEEEECCCCcEEEEEEh
Confidence 233466 236666655532 1556677777655444 367987777664
No 56
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=97.28 E-value=0.0024 Score=50.27 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=38.5
Q ss_pred ccCC--ccccccccceeeeCCCccccChHHHHH-HHHHhhccccCceEEEeeee
Q 025542 105 VTGI--FTSEIYAEDCIFEDPTIRFRGTELYSR-NLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~-~~~~L~~~~~~~~f~l~~~e 155 (251)
.++| .+.++|++|+.+-+|...++|++.|++ .+.....++....+++.++.
T Consensus 44 ~~~D~~~l~~l~a~Da~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (148)
T 3bb9_A 44 QMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQ 97 (148)
T ss_dssp HHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEEEEEEE
T ss_pred HhCCHHHHHHhhCCCeEEEeCCCccCCHHHHHHHhHHHHHHhccCceEEeeeEE
Confidence 4666 778899999998888877999999998 66555444555667766654
No 57
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=96.84 E-value=0.02 Score=45.87 Aligned_cols=66 Identities=8% Similarity=0.080 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHhhhhhcccCC--ccccccccc--eeeeCCCc-cccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 86 SGIDDIVTILRSDYENAYFVTGI--FTSEIYAED--CIFEDPTI-RFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 86 ~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD--~~F~DP~~-~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
.+++++.+.+.+-+ ..|| -+.++|++| +.|.+|.. .++|.++++++++.++.......+++.++..
T Consensus 8 ~~~~~~~~af~~A~-----~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~~~~i~~~~v~v 78 (144)
T 3gwr_A 8 PTPEAAEDAFYAAF-----EARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFGAAGRFRLQVKAVHE 78 (144)
T ss_dssp SSHHHHHHHHHHHH-----HHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHH-----HcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHcCCCcEEEEEEEEEE
Confidence 34555555544444 4566 678899998 89999974 6899999999998887654444555655553
No 58
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=96.27 E-value=0.068 Score=42.85 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=38.0
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCC-CccccChHHHHHHHHHhhcc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDP-TIRFRGTELYSRNLRLLVPF 143 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP-~~~f~Gld~y~~~~~~L~~~ 143 (251)
+..+.+.|... +.+++ ...++|++|+.|.++ -..+.|++.+.+++..++..
T Consensus 18 I~~~~~~~~~A-~~~~D~d~~~~lfa~Da~~~~~~g~~~~Gr~aI~~~~~~~~~~ 71 (172)
T 3cu3_A 18 IRAFHRQMIDA-WNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDT 71 (172)
T ss_dssp HHHHHHHHHHH-HHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HHcCCHHHHHhhcCCCeEEEeCCCCeEECHHHHHHHHHHHhhc
Confidence 44444445433 35777 788999999999984 46789999999999887554
No 59
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=96.23 E-value=0.048 Score=44.00 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=74.1
Q ss_pred CCHHHHHHHHHHHhhhhhcccCC--ccccccccceeeeCC--CccccChHHHHHHHHHhhccccCceEEEeeeeEeeeee
Q 025542 86 SGIDDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDP--TIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLV 161 (251)
Q Consensus 86 ~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP--~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~ 161 (251)
++.+++++++=+-.. .|+ -+...|++|..|.=| .--.+|+++|+..|..|..-+ .+.++|+...+-+
T Consensus 2 M~~~~iVqrlW~al~-----AgD~D~l~adyaeDaV~i~P~sa~vl~GR~~~r~a~~~L~~~l-P~g~~It~lR~i~--- 72 (120)
T 3lyg_A 2 MNLANIVQRGWEALG-----AGDFDTLVTDYVEKMIFIMPGQADVLKGRQAFRSALDNLGEIL-PPGFEITGLRQLE--- 72 (120)
T ss_dssp CCHHHHHHHHHHHHH-----HTCHHHHGGGEEEEEEEECSSTTCEEESHHHHHHHHTTHHHHS-CTTCEEEEEEEEE---
T ss_pred CCHHHHHHHHHHHHh-----cCCHHHHHHhcccCeEEEccCccceeecHHHHHHHHHHHHhhC-CCCceeeeEEEec---
Confidence 455666776655443 445 567899999999999 899999999999998887666 3567887776533
Q ss_pred hhhccccccccccccccccCCCceeeccceeeEEEEEEEEeeCCCCCeeEEEEEEEEEEcCCCCEEEEEEeccCChhh
Q 025542 162 SLMVGRREGRMRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPLISIDGSTVYELNDELKITRHAESWNVSALE 239 (251)
Q Consensus 162 ~~~~~~~e~~~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~i~v~G~T~~~fd~~GkI~~H~DyWD~sa~~ 239 (251)
.|+...- .+.|.... .-...=.+-++|.+ |||+.-+=+=|..+|.
T Consensus 73 -------------------ggn~VVS-----eve~~~~~--------~~~~~~~~lf~f~~-g~I~~er~~~~~~~~~ 117 (120)
T 3lyg_A 73 -------------------GENEIVS-----IVEWKSDK--------MIASQLSVLFKFEG-DQIYEERWFVDTEQWK 117 (120)
T ss_dssp -------------------CSSEEEE-----EEEEEETT--------EEEEEEEEEEEEET-TEEEEEEEECCHHHHH
T ss_pred -------------------CCCEEEE-----EEEEcCCC--------eeeEEEEEEEEEEC-CEEEEEEEEEeHHHhh
Confidence 1222221 15555432 22333355678875 8999876555555554
No 60
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=96.01 E-value=0.1 Score=40.44 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=36.9
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCccc-cChHHHHHHHHHh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRF-RGTELYSRNLRLL 140 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f-~Gld~y~~~~~~L 140 (251)
+..|...|... +++++ .+.++|++|+.|..|...+ +|.+.+.+.+..+
T Consensus 21 I~~l~~~y~~a-~D~~d~~~~~~lf~~Da~~~~~~g~~~~G~~~i~~~~~~~ 71 (155)
T 2rfr_A 21 IRELIARYGPL-ADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQ 71 (155)
T ss_dssp HHHHHHHHHHH-HHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSH
T ss_pred HHHHHHHHHHH-hcCCCHHHHHhhcCCceEEEcCCCccccCHHHHHHHHHhc
Confidence 34444445433 46777 6889999999999998888 9999999888765
No 61
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=95.71 E-value=0.26 Score=39.15 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhhhcccCC--ccccccccceeee-CCCccccChHHHHHHHHHhhc-cccCceEE
Q 025542 91 IVTILRSDYENAYFVTGI--FTSEIYAEDCIFE-DPTIRFRGTELYSRNLRLLVP-FFEYPSIG 150 (251)
Q Consensus 91 ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~-DP~~~f~Gld~y~~~~~~L~~-~~~~~~f~ 150 (251)
.++.|-+.|... +..+| .+.++|++|+.|. .|-..+.|++.+.+.+...+. .+....+.
T Consensus 7 aI~~l~~~~~~A-~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~ 69 (146)
T 3gzr_A 7 AIQALIQAYFTA-WNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQE 69 (146)
T ss_dssp HHHHHHHHHHHH-HHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEE
T ss_pred HHHHHHHHHHHH-HHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEE
Confidence 345555555543 34566 8899999999998 555678999999999877654 34333443
No 62
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=95.52 E-value=0.26 Score=39.11 Aligned_cols=51 Identities=18% Similarity=0.067 Sum_probs=38.3
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhcc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPF 143 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~ 143 (251)
+..|...|... ++.++ ...++|++|+.|..|-..+.|++.+...+....+.
T Consensus 16 I~~l~~~y~~a-~D~~D~~~~~~lf~~Da~~~~~g~~~~G~~~i~~~~~~~~~~ 68 (170)
T 2chc_A 16 IQALCARYCLT-INTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARV 68 (170)
T ss_dssp HHHHHHHHHHH-HTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCCHHHHHhcccCcEEEEeCCCCcCCHHHHHHHHHHhhcc
Confidence 34444445433 46777 68899999999999988889999999998776543
No 63
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=95.03 E-value=0.3 Score=38.52 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=35.7
Q ss_pred HHHHHHHhhhhhccc-CC--ccccccccceeeeCCC-c--cccChHHHHHHHHHhh
Q 025542 92 VTILRSDYENAYFVT-GI--FTSEIYAEDCIFEDPT-I--RFRGTELYSRNLRLLV 141 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvt-g~--~~~~iY~eD~~F~DP~-~--~f~Gld~y~~~~~~L~ 141 (251)
+..|...|... +++ ++ .+.++|++|+.|.-|. . .+.|++.+...+....
T Consensus 30 I~~l~~~y~~a-lD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~ 84 (163)
T 3b8l_A 30 IQDLMIAYAHA-VDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVF 84 (163)
T ss_dssp HHHHHHHHHHH-HHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhh
Confidence 44455555433 467 77 6889999999998653 4 6999999998887653
No 64
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=94.83 E-value=0.28 Score=38.33 Aligned_cols=48 Identities=13% Similarity=-0.075 Sum_probs=43.1
Q ss_pred ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 109 FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 109 ~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
.+.+.|++|+.+.+|...+.|+++++.++......+..-+|++.++..
T Consensus 31 ~l~a~~a~d~~mv~p~G~~~g~~~~~~~~~~~~g~~pgl~i~i~~l~~ 78 (128)
T 1tp6_A 31 ALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESL 78 (128)
T ss_dssp HHHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTTCEEEEEEEEE
T ss_pred HHHHhcCCCEEEECCCCeECCHHHHHHHHHHhhCCCCCeEEEEEEEEE
Confidence 578999999999999999999999999999998888777888877764
No 65
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=94.69 E-value=0.23 Score=39.49 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=28.5
Q ss_pred ccCC--ccccccccc--eeeeCCCccccChHHHHHHH
Q 025542 105 VTGI--FTSEIYAED--CIFEDPTIRFRGTELYSRNL 137 (251)
Q Consensus 105 vtg~--~~~~iY~eD--~~F~DP~~~f~Gld~y~~~~ 137 (251)
.++| .+.++|++| +.|..|....+|.+.++.++
T Consensus 24 ~~~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~~ 60 (145)
T 3soy_A 24 DKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENF 60 (145)
T ss_dssp HTTCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHHC
T ss_pred HcCCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHHH
Confidence 6777 789999664 89999999999999998876
No 66
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=94.63 E-value=0.37 Score=40.24 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHhhhhhcccCC--ccccccccc-----------------eeeeCCC-ccccChHHHHHHHHHhhcccc
Q 025542 86 SGIDDIVTILRSDYENAYFVTGI--FTSEIYAED-----------------CIFEDPT-IRFRGTELYSRNLRLLVPFFE 145 (251)
Q Consensus 86 ~~~~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD-----------------~~F~DP~-~~f~Gld~y~~~~~~L~~~~~ 145 (251)
.+.+++.+.+.+.|+.+ .+|+ .+.++|++| +.|.-|- ..+.|+++++++++.++....
T Consensus 9 ~d~~~I~~~~~~~~~A~--~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~~~~f~~~~ 86 (170)
T 3cnx_A 9 TDVEQVGLANTAFYEAM--ERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTE 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHH--HTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCS
T ss_pred chHHHHHHHHHHHHHHH--HcCCHHHHHHhhcCCcccccccccccccccccEEEEcCCCccccCHHHHHHHHHHHHccCC
Confidence 34567777888888755 6788 778999999 4566775 458999999999988876654
Q ss_pred CceEEEeeeeE
Q 025542 146 YPSIGLQNIEK 156 (251)
Q Consensus 146 ~~~f~l~~~e~ 156 (251)
...+++.++..
T Consensus 87 ~~~~~~~dv~v 97 (170)
T 3cnx_A 87 YIQFFLTDVHV 97 (170)
T ss_dssp EEEEEEEEEEE
T ss_pred eeEEEEEEEEE
Confidence 44666666664
No 67
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=94.61 E-value=0.42 Score=35.05 Aligned_cols=50 Identities=8% Similarity=-0.109 Sum_probs=35.8
Q ss_pred ccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 105 VTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
..+| .+.+++++|+.|.+|.....|.+.|.+.+..- .+....+++.+.+.
T Consensus 20 ~~~D~~~l~~l~~~d~~~~~~~G~~~~~~~~i~~~~~~--~~~~~~~~~~~~~v 71 (123)
T 2r4i_A 20 QNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSG--KIALRAVVPSDYII 71 (123)
T ss_dssp HHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTT--CEEEEEEEEEEEEE
T ss_pred HhCCHHHHHhhhCcCeEEECCCCCCccHHHHHHHHhcC--CeEEEEEeecccEE
Confidence 4566 77889999999999998889999888777532 12233455555543
No 68
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=93.86 E-value=0.45 Score=38.52 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=34.8
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeee-CCCccccChHHHHHHH-HHh
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFE-DPTIRFRGTELYSRNL-RLL 140 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~-DP~~~f~Gld~y~~~~-~~L 140 (251)
++.|...|... +++++ .+.++|++|+.|. .+...++|.+.+...+ ...
T Consensus 33 I~~ll~ry~~a-lD~~d~d~~~~lfteDa~~~~~~~g~~~G~~~i~~~~~~~~ 84 (176)
T 3a76_A 33 IQDLYSDKLIA-VDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVL 84 (176)
T ss_dssp HHHHHHHHHHH-HHHTCHHHHHTTEEEEEEEEETTTEEEEHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHH-hcCCCHHHHHhhccCCeEEEcCCCccccCHHHHHHHHHHhh
Confidence 44555555433 46777 6889999999996 4445689999998888 554
No 69
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=93.74 E-value=1.1 Score=35.14 Aligned_cols=50 Identities=18% Similarity=0.327 Sum_probs=37.2
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeC-CCccccChHHHHHHHHHhhc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFED-PTIRFRGTELYSRNLRLLVP 142 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~D-P~~~f~Gld~y~~~~~~L~~ 142 (251)
++.|...|... +++++ .+.++|++|+.|.- |...++|++.+...+..+.+
T Consensus 13 I~~l~~ry~~~-~D~~d~~~~~~lFt~D~~~~~~~~~~~~G~~~i~~~~~~~~~ 65 (150)
T 3ef8_A 13 IERMMFDYSYH-LDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGT 65 (150)
T ss_dssp HHHHHHHHHHH-HHTTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHTTTHHH
T ss_pred HHHHHHHHHHH-hcCCCHHHHHhhccCceEEEccCCCCCCCHHHHHHHHHHhhc
Confidence 45566666543 46777 78899999999985 44568999999988866543
No 70
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=93.70 E-value=0.69 Score=36.22 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=38.6
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFF 144 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~ 144 (251)
++.|.+.|... +..++ .+.++|++|+.|..|-..++|++++.+.+...+..+
T Consensus 21 i~~l~~~y~~A-~~~~D~d~~~~lf~~Da~~~~~g~~~~Gr~aI~~~~~~~~~~~ 74 (143)
T 4i4k_A 21 VAALPARIVAA-WADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGP 74 (143)
T ss_dssp HHTHHHHHHHH-HHTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-HHcCCHHHHHHHhhcCceEEeCCCeecCHHHHHHHHHHHHhhc
Confidence 33444444333 35677 789999999999988777999999999998776543
No 71
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=93.42 E-value=0.83 Score=35.01 Aligned_cols=50 Identities=18% Similarity=0.169 Sum_probs=35.4
Q ss_pred ccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeeeE
Q 025542 105 VTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIEK 156 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~ 156 (251)
..+| .+.++|++|+.|.+|.....+.+.|.+.+.. .......+++.+.+.
T Consensus 28 ~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~~--g~~~~~~~~~~~~~v 79 (134)
T 3fsd_A 28 LTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRA--GLLKLSRLDLSDAVV 79 (134)
T ss_dssp HHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHT--TCEEEEEEEEEEEEE
T ss_pred HhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHHc--CCceEEEEEEeccEE
Confidence 4566 7789999999999999988888888777652 122234555555543
No 72
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=93.33 E-value=0.75 Score=37.20 Aligned_cols=59 Identities=19% Similarity=0.180 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHhhhhhcccCCccccccccceeeeCC--CccccChHHHHHHHHHhhccccC
Q 025542 86 SGIDDIVTILRSDYENAYFVTGIFTSEIYAEDCIFEDP--TIRFRGTELYSRNLRLLVPFFEY 146 (251)
Q Consensus 86 ~~~~~ll~~L~~Dy~~~Yfvtg~~~~~iY~eD~~F~DP--~~~f~Gld~y~~~~~~L~~~~~~ 146 (251)
++.+..++++.+.+..+ .||++..--|++|+.|.-| ...+.|++....-+.+..+.+..
T Consensus 2 M~re~~v~iieqYl~aF--~TgdfS~VqFs~~~~F~sPir~~~l~G~~tV~gFlt~V~trVa~ 62 (130)
T 3ecf_A 2 MATEKYHEILKKYFLSF--ETGDFSQVQFSCNLEFLSPISGNTLKGTEEVIPFLKGVTTRVAE 62 (130)
T ss_dssp -CHHHHHHHHHHHHHHH--HHCCCTTSCEEEEEEECCTTCSSCEESHHHHHHHHHHHHTTEEE
T ss_pred ccHHHHHHHHHHHHHHH--hcCCeeecccccCcEEecCccCCCccCchhHHHHHhhhhhhhhe
Confidence 56788899999988865 8999999999999999999 47899999998888888766643
No 73
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=90.56 E-value=3 Score=33.23 Aligned_cols=49 Identities=8% Similarity=-0.097 Sum_probs=33.8
Q ss_pred ccCC--ccccccccceeeeCCC---ccccChHHHHHHHHHhhccccCceEEEeeee
Q 025542 105 VTGI--FTSEIYAEDCIFEDPT---IRFRGTELYSRNLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 105 vtg~--~~~~iY~eD~~F~DP~---~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e 155 (251)
.+|| ...++|++|+.+-||. +.+.|++.++.+|.+- ......+++.+..
T Consensus 26 ~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~--~~~~~~~~~~~~~ 79 (143)
T 2f86_B 26 SCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGN--RKNQVHTTMLNPN 79 (143)
T ss_dssp HHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSC--SCCSCEEEEEEEE
T ss_pred HccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcc--cCCcceeEEEcce
Confidence 4677 6788999999999983 2589999998765441 1223456666654
No 74
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=90.42 E-value=4.9 Score=30.87 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=36.6
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeeeCCCccccChHHHHHHHHHhhc
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVP 142 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~ 142 (251)
++.|...|... ++.++ .+.++|++|+.|.-|...+.|.+.+...+.....
T Consensus 12 I~~l~~rya~~-lD~~d~~~~~~lft~Da~~~~~~g~~~g~~~i~~~~~~~~~ 63 (144)
T 2rgq_A 12 IMELAARFEMS-LDKEDVENYLATFASDGALQGFWGIAKGKEELRQGFYAMLD 63 (144)
T ss_dssp HHHHHHHHHHH-HHHTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCCHHHHHhhccCcEEEEcCCCCCCCHHHHHHHHHHHHh
Confidence 44555555433 46777 6889999999998886667999998888765543
No 75
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=89.17 E-value=2.6 Score=31.59 Aligned_cols=38 Identities=13% Similarity=-0.025 Sum_probs=30.6
Q ss_pred ccCC--cccccc--ccceeeeCCCccccChHHHHHHHHHhhc
Q 025542 105 VTGI--FTSEIY--AEDCIFEDPTIRFRGTELYSRNLRLLVP 142 (251)
Q Consensus 105 vtg~--~~~~iY--~eD~~F~DP~~~f~Gld~y~~~~~~L~~ 142 (251)
..+| .+.++| ++|+.|.+|....+|.+.....+..+++
T Consensus 19 ~~~D~~~~~~~y~~~~d~~~~~~~~~~~G~~~i~~~~~~~f~ 60 (122)
T 3b7c_A 19 NRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYP 60 (122)
T ss_dssp HTTCHHHHHTTBCCSTTCEEECSSCEEECHHHHHHHHHHHCS
T ss_pred HcCCHHHHHHhhcCCCCEEEECCCccccCHHHHHHHHHHhcC
Confidence 4677 556999 8999999998889999888887665543
No 76
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=87.46 E-value=3.2 Score=34.05 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhhhhcccCC--ccccccccceeeeCC---------CccccChHHHHHHHHHhhc
Q 025542 89 DDIVTILRSDYENAYFVTGI--FTSEIYAEDCIFEDP---------TIRFRGTELYSRNLRLLVP 142 (251)
Q Consensus 89 ~~ll~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP---------~~~f~Gld~y~~~~~~L~~ 142 (251)
...++.|...|... +++++ .+.++|++|+.|.-| ...++|++++.+.+....+
T Consensus 25 ~~~I~~l~~~y~~~-~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~ 88 (179)
T 3ejv_A 25 ETIILNVLGQYTRA-HDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMA 88 (179)
T ss_dssp HHHHHHHHHHHHHH-HHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHH-HhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhc
Confidence 34466666777543 46777 788999999997632 2478999999999876643
No 77
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=81.42 E-value=21 Score=33.00 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=65.5
Q ss_pred HHHHhhhhhcccCC--ccccccccceeeeCCCc-cccChHHHHHHHHHhhccccCceEEEeeeeEeeeeehhhccccccc
Q 025542 95 LRSDYENAYFVTGI--FTSEIYAEDCIFEDPTI-RFRGTELYSRNLRLLVPFFEYPSIGLQNIEKFVFLVSLMVGRREGR 171 (251)
Q Consensus 95 L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~DP~~-~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e~~~~~~~~~~~~~e~~ 171 (251)
+.+.++.+ ..|+ -+.++|++|-.-.|||. -+.|+++..++++.=... -++....-.. + .-
T Consensus 198 Vl~Y~e~l--Na~Df~a~aaLFA~Dg~LepPf~~PIvGreAI~~y~~~eaq~---~~l~P~~g~~-e-----------p~ 260 (323)
T 3mg1_A 198 VLNYMDNL--NANDFDTLIELFTSDGALQPPFQRPIVGKENVLRFFREECQN---LKLIPERGVT-E-----------PA 260 (323)
T ss_dssp HHHHHHHH--HTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHCTT---CEEEEEEEEE-E-----------EC
T ss_pred HHHHHHHh--cccCHHHHHHHccCCCeeCCCCCCCccCHHHHHHHHHHHhcc---CEEeeccCcc-c-----------cc
Confidence 33334544 6677 67899999999999995 578999999999765322 3333322110 0 00
Q ss_pred cccccccccCCCceeeccceeeEEEEEEEEeeCCCCCe-eEEEEEEEEEEcCCCCEEEEEE
Q 025542 172 MRGLHNSTALGGHIFLLPYLLRISLICRTYLKLPWKPL-ISIDGSTVYELNDELKITRHAE 231 (251)
Q Consensus 172 ~~~~~~~~~~~g~~~i~p~~v~~~Wrm~~~lkLPw~P~-i~v~G~T~~~fd~~GkI~~H~D 231 (251)
-+| + ..=.++|+...||-.. +-++-.=++.||++|||++-.=
T Consensus 261 ---------e~g--~-------~qi~vtGkVqTpwfGv~v~mnVaW~F~lN~~gkI~~v~i 303 (323)
T 3mg1_A 261 ---------EDG--F-------TQIKVTGKVQTPWFGGNVGMNIAWRFLLNPEGKIFFVAI 303 (323)
T ss_dssp ---------GGG--C-------EEEEEEEEEECTTTGGGCCEEEEEEEEECTTSCEEEEEE
T ss_pred ---------cCC--C-------ceEEEEEEEEcccCCccccccceeEEEECCCCcEEEEEe
Confidence 111 1 3334678888888754 3345556799999999987543
No 78
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=55.74 E-value=67 Score=24.57 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=37.8
Q ss_pred HHHHHHHHhhhhhcccCCc---cccccccceeee-----CCCccccChHHHHHHHHHhhccc
Q 025542 91 IVTILRSDYENAYFVTGIF---TSEIYAEDCIFE-----DPTIRFRGTELYSRNLRLLVPFF 144 (251)
Q Consensus 91 ll~~L~~Dy~~~Yfvtg~~---~~~iY~eD~~F~-----DP~~~f~Gld~y~~~~~~L~~~~ 144 (251)
.++.|..-|... +++++. ..++|++|+.+. .+.....|++.+...+......+
T Consensus 12 ~I~~L~~rY~~~-~D~~d~~~l~~~~ft~Da~~d~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 72 (159)
T 4gb5_A 12 EIIELFGRYADI-ADLKEFTDLPRRVHTDPLTIDFESVTGMPPMTVPLSDYGAALRASFGAF 72 (159)
T ss_dssp HHHHHHHHHHHH-HHTTCCSSHHHHHEEEEEEEECHHHHCCCCEEECHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH-HhCCCHHHHHHhhCcCCEEEEecCCCCCcccccHHHHHHHHHHHhccCC
Confidence 356777778643 577773 357999999975 35567889999998887665433
No 79
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=49.92 E-value=33 Score=25.52 Aligned_cols=50 Identities=18% Similarity=0.122 Sum_probs=34.7
Q ss_pred cccCC--ccccccccc--eeeeCCCccccChHHHHHHHHHhhccccCceEEEeeee
Q 025542 104 FVTGI--FTSEIYAED--CIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 104 fvtg~--~~~~iY~eD--~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e 155 (251)
|.++| .+.++|++| +.+.++-..+.|.+.++. +...++.. ...+.+.+..
T Consensus 27 ~~~~D~~~l~~lf~~d~~~~~~~~~~~~~G~~~i~~-~~~~~~~~-~~~~~~~~~~ 80 (129)
T 2rcd_A 27 LTGNDVAVLDELFWHDEKTVRYGAGENLYGIEEIRA-FRLARPSA-GLDRALRNTV 80 (129)
T ss_dssp HHTTCHHHHHHHBCCSTTCEEEETTEEEESHHHHHH-HHHHSCCT-TCCCEEEEEE
T ss_pred HhcCCHHHHHHhccCCCCEEEECCCCccCCHHHHHH-HHHhcCCC-CCceEEEEEE
Confidence 36777 788999998 455567777899999999 87776543 2344444443
No 80
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=39.84 E-value=1.1e+02 Score=25.03 Aligned_cols=46 Identities=7% Similarity=0.034 Sum_probs=34.2
Q ss_pred HHHHHHHhhhhhcccCC--ccccccccceeee-----CCCccccChHHHHHHHH
Q 025542 92 VTILRSDYENAYFVTGI--FTSEIYAEDCIFE-----DPTIRFRGTELYSRNLR 138 (251)
Q Consensus 92 l~~L~~Dy~~~Yfvtg~--~~~~iY~eD~~F~-----DP~~~f~Gld~y~~~~~ 138 (251)
+.+++..|.+. +++.+ .+.++|+||+++. .....+.+.+.|...+.
T Consensus 19 I~~l~~rY~Ra-~DtkDwd~lr~~fapd~~~Dy~~~~~~~~~~~~~d~~v~~~~ 71 (172)
T 1idp_A 19 LMTCVYEWADS-YDSKDWDRLRKVIAPTLRIDYRSFLDKLWEAMPAEEFVGMVS 71 (172)
T ss_dssp HHHHHHHHHHH-HHHTCHHHHHTTEEEEEEEECHHHHSCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHH-hhcCCHHHHHHHhCCCEEEEcccccCcccccCCHHHHHHHHh
Confidence 67777788765 57888 8999999999775 12225567899988776
No 81
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=36.34 E-value=72 Score=24.53 Aligned_cols=66 Identities=15% Similarity=0.235 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHhhhhhccc-CCccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeee
Q 025542 87 GIDDIVTILRSDYENAYFVT-GIFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 87 ~~~~ll~~L~~Dy~~~Yfvt-g~~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e 155 (251)
+.+++.+.+.+-|=.. |++ ...+..+|.++..|.=+.+.+.|.++....+..|- +.++..++..+.
T Consensus 4 ~~~~v~~~Fv~~YY~~-~d~~r~~L~~~Y~~~S~~s~~g~~~~G~~~I~~~l~~Lp--~~~~~h~i~t~D 70 (125)
T 1gy7_A 4 DFNTLAQNFTQFYYNQ-FDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLP--FQKVQHRITTLD 70 (125)
T ss_dssp CHHHHHHHHHHHHHHH-HHHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSC--CSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHH-HcCCHHHHHHhhCCCcEEEECCcEecCHHHHHHHHHhCC--CcceEEEEEEEE
Confidence 4555655555554322 133 33779999999999877889999999999998772 445556665543
No 82
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=26.13 E-value=2.1e+02 Score=22.02 Aligned_cols=66 Identities=15% Similarity=0.266 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHhhhhhcccC-CccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeee
Q 025542 87 GIDDIVTILRSDYENAYFVTG-IFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 87 ~~~~ll~~L~~Dy~~~Yfvtg-~~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e 155 (251)
+.+++.+.+.+-|=.. |++. ..+..+|.++..|.=+-+.+.|.++....+..|- +.++..++..+.
T Consensus 10 ~~~~v~~~Fv~~YY~~-~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~~~h~i~t~D 76 (129)
T 1zo2_A 10 QFDQIGKQFVQHYYQT-FQTNRPALGGLYGPQSMLTWEDTQFQGQANIVNKFNSLN--FQRVQFEITRVD 76 (129)
T ss_dssp THHHHHHHHHHHHHHH-HHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHHC--CSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHH-HhCCHHHHHHhhCCCcEEEECCceeccHHHHHHHHHhCC--CcceEEEEEEEE
Confidence 3566666665555322 2443 3789999999999878889999999999998873 333455555443
No 83
>1njh_A Protein YOJF; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.70A {Bacillus subtilis} SCOP: b.128.1.1
Probab=25.93 E-value=95 Score=24.81 Aligned_cols=25 Identities=24% Similarity=0.466 Sum_probs=18.2
Q ss_pred EEEeeCCCCCeeEEEEEEEEEEcCCCCE
Q 025542 199 RTYLKLPWKPLISIDGSTVYELNDELKI 226 (251)
Q Consensus 199 ~~~lkLPw~P~i~v~G~T~~~fd~~GkI 226 (251)
..+++.-| +-++|.|+|+.|++|+.
T Consensus 71 GLk~~~GW---vYaeGLTh~e~d~~grL 95 (119)
T 1njh_A 71 GLKTEEGW---IYAEGLTEYTVDEENRL 95 (119)
T ss_dssp EEEESSSE---EEEEEECEEEECTTCCE
T ss_pred EEEcCCCE---EEEccceeeEEcCCCcE
Confidence 33444445 78999999999998753
No 84
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=25.09 E-value=1e+02 Score=24.45 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHh-hhhhcccCC-ccccccccceeeeCC---------------CccccChHHHHHHHHHhhccccCceE
Q 025542 87 GIDDIVTILRSDY-ENAYFVTGI-FTSEIYAEDCIFEDP---------------TIRFRGTELYSRNLRLLVPFFEYPSI 149 (251)
Q Consensus 87 ~~~~ll~~L~~Dy-~~~Yfvtg~-~~~~iY~eD~~F~DP---------------~~~f~Gld~y~~~~~~L~~~~~~~~f 149 (251)
+.+++...+.+-| ..+ ++.. .+..+|.++..|.=. ...+.|.++....+..|..-|..+..
T Consensus 10 ~~~~v~~~Fv~~YY~~~--d~~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf~~~~h 87 (154)
T 2qiy_A 10 TVQDICFAFLQNYYERM--RTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKVRSLKL 87 (154)
T ss_dssp CHHHHHHHHHHHHHHHH--HHCGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHHTTEEE
T ss_pred CHHHHHHHHHHHHHHHH--hCCHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCCCceEE
Confidence 3455655555554 432 4433 778999999776533 78899999999999888312445556
Q ss_pred EEeeee
Q 025542 150 GLQNIE 155 (251)
Q Consensus 150 ~l~~~e 155 (251)
+|..+.
T Consensus 88 ~I~s~D 93 (154)
T 2qiy_A 88 KLDTID 93 (154)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665543
No 85
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=22.81 E-value=1.4e+02 Score=22.90 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHh-hhhhccc-CCccccccccceeeeCCCccccChHHHHHHHHHhhccccCceEEEeeee
Q 025542 88 IDDIVTILRSDY-ENAYFVT-GIFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIE 155 (251)
Q Consensus 88 ~~~ll~~L~~Dy-~~~Yfvt-g~~~~~iY~eD~~F~DP~~~f~Gld~y~~~~~~L~~~~~~~~f~l~~~e 155 (251)
.+++.+.+.+-| ..+ ++ ...+..+|.++..|.=+-+.+.|.++..+.+..|- +.++..++..+.
T Consensus 7 ~~~v~~~Fv~~YY~~~--d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~~~h~i~t~d 72 (127)
T 1gy6_A 7 WEQIGSSFIQHYYQLF--DNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP--FQKIQHSITAQD 72 (127)
T ss_dssp HHHHHHHHHHHHHHHH--HHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHCS--CSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHH--hCCHHHHHHhhCCCcEEEECCccccCHHHHHHHHHhCC--CcceEEEEEEEE
Confidence 345555555554 422 33 33788999999999877889999999999998872 333455555443
No 86
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=20.03 E-value=2.6e+02 Score=21.10 Aligned_cols=37 Identities=8% Similarity=-0.146 Sum_probs=28.2
Q ss_pred ccCC--ccccccccce--eeeCCCccccChHHHHHHHHHhh
Q 025542 105 VTGI--FTSEIYAEDC--IFEDPTIRFRGTELYSRNLRLLV 141 (251)
Q Consensus 105 vtg~--~~~~iY~eD~--~F~DP~~~f~Gld~y~~~~~~L~ 141 (251)
.++| .+.++|++|. .|.-+-....|.+..+.+...+.
T Consensus 25 ~~~D~~~L~~lf~~d~~~v~~~~g~~l~G~~~I~a~r~~~~ 65 (129)
T 2owp_A 25 VENDIEAMNALFWHTPETVRYGIAEVQHGGEAIRAWRERCE 65 (129)
T ss_dssp HHTCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHHHHSC
T ss_pred HhCCHHHHHhhccCCCcEEEeCCCCccCCHHHHHHHHHhcC
Confidence 6777 8899999995 45566677899999999655543
Done!