BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025545
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L9A0|RM21_ARATH 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana
GN=RPL21M PE=2 SV=1
Length = 270
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/252 (57%), Positives = 178/252 (70%), Gaps = 15/252 (5%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLP------FS-TSISLKGLTPFQHRSLISSTLGPT 53
MA RC LSR A + S+ ++ FS TSIS + P +RSL + +
Sbjct: 1 MASLRCFRELSRRATTVFSINQTRSISSFHGIEFSGTSISHGTVIP--NRSLTRNLPWYS 58
Query: 54 NW--SHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEA 111
+W S R FSSN D + ++ + ++D+E E +E D ++ REY+ EK
Sbjct: 59 HWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDS--ADM--EVEREYSPAEKVE 114
Query: 112 EAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLI 171
EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL
Sbjct: 115 EAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLE 174
Query: 172 LNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELT 231
L KVLLLGS QTIIGRP++PDA VHAVVEEHALD KV+IFKKKRRKNYRRT+GHRQELT
Sbjct: 175 LTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELT 234
Query: 232 KLRIVDIQGIEK 243
KLRI DIQGIEK
Sbjct: 235 KLRITDIQGIEK 246
>sp|P24613|RK21_SPIOL 50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea
GN=RPL21 PE=1 SV=1
Length = 256
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 79/105 (75%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAVV IGS Q+ V G I+T+RLK VNDK++LNKVLL+G++ T IG P+V +AAVH
Sbjct: 124 FAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVH 183
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIE 242
AVVEE LD KVI+FK K++KNYRR GHRQ +T+++I I G E
Sbjct: 184 AVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYE 228
>sp|B6IR01|RL21_RHOCS 50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplU PE=3 SV=1
Length = 103
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+KV+NGD I E+L + + L+ VL++ +T IG P+V AAV
Sbjct: 2 FAVIRTGGKQYKVANGDVIKVEKL-VADAGATVTLDDVLMVSDAGKTTIGTPVVQGAAVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A V + K+IIFKKKRR+NYRR GHRQ+LT LRI IQ
Sbjct: 61 AEVVAQSRGPKIIIFKKKRRQNYRRKNGHRQDLTVLRITGIQ 102
>sp|P51412|RK21_ARATH 50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana
GN=RPL21 PE=2 SV=1
Length = 220
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%)
Query: 108 EKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVN 167
E E E +I V+ + + K E FAV+ +G Q+ V G ++T+RLK V+
Sbjct: 71 EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130
Query: 168 DKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 227
D+++LNKVLL+G++ T IG+P+V +A VHAVVE L+ KV++FK K +K YRR GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190
Query: 228 QELTKLRIVDIQGIEK 243
Q T++RI I G E+
Sbjct: 191 QPNTRIRITGITGYEE 206
>sp|Q2VZU4|RL21_MAGSA 50S ribosomal protein L21 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplU PE=3 SV=1
Length = 100
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV+Q G Q+KV++GD I E+L E +++L++VL++G + IG P+V A+V
Sbjct: 2 FAVIQTGGKQYKVASGDVIRVEKLA-GEAGAEVVLDQVLMVGDK----IGVPVVAGASVK 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V A K+I+FKK+RR+N RR GHRQ+LT LRI DI
Sbjct: 57 ATVVAQARGEKIIVFKKRRRQNSRRKNGHRQDLTILRITDI 97
>sp|Q54IF0|RM21_DICDI Probable 39S ribosomal protein L21, mitochondrial OS=Dictyostelium
discoideum GN=mrpl21 PE=3 SV=1
Length = 172
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 137 AFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAV 196
+FAVV I Q+KV GD I T++++ +V + ++L+KVLL+G++++TIIG+P++ + V
Sbjct: 61 SFAVVHISGKQYKVIEGDIIMTDKIQ-VDVGEHIVLDKVLLVGTKNETIIGKPIISNFKV 119
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQGIEKRVEVATAA 251
HA +EE A V IFK K RKNY+RT G + T +R I GI K E T
Sbjct: 120 HAYIEEQAKTEHVTIFKHKPRKNYKRTTGFQGLATYIR---IGGIIKGQETTTTT 171
>sp|Q0AKX7|RL21_MARMM 50S ribosomal protein L21 OS=Maricaulis maris (strain MCS10)
GN=rplU PE=3 SV=1
Length = 223
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ GD I E+L+ D L L VL+LGS+ +G P + A V
Sbjct: 2 FAVIKTGGKQYRVAAGDEIRIEKLEGA-AGDTLDLGDVLMLGSEAGVTVGSPTIDGAQVI 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
+ + K+I+FKK+RR+NYRRTKGHRQ T +RI +I
Sbjct: 61 GELLDTNRARKIIVFKKRRRQNYRRTKGHRQWGTVVRIAEI 101
>sp|Q1GZ51|RL21_METFK 50S ribosomal protein L21 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rplU PE=3 SV=1
Length = 104
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q++V+ GD + E+L EV ++ L+KVLL+ T IG P+V A+V
Sbjct: 2 YAVIKTGGKQYRVAAGDKLKVEKLA-GEVGSEITLDKVLLVSDGDNTTIGSPLVQGASVQ 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V H KV+IFK +RRK+YR+T+GHRQ T+++I
Sbjct: 61 AKVVAHGRGDKVLIFKMRRRKHYRKTQGHRQSFTEIQI 98
>sp|B8E0B4|RL21_DICTD 50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=rplU PE=3 SV=1
Length = 105
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
F VV+ G Q+KVS G + E+LK V D+++L+KVLL+G + + IIG+P V A V
Sbjct: 2 FVVVETGGKQYKVSVGSMVNVEKLK-ANVGDEVVLDKVLLVGKEDEVIIGQPYVEGAKVI 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V KVI+FK KR+K+YRR GHRQ T+L I +I
Sbjct: 61 AKVVRQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSIKEI 101
>sp|A9IM54|RL21_BART1 50S ribosomal protein L21 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rplU PE=3 SV=1
Length = 158
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+++ + E++ D + N VL++G + +IG P+V DA V
Sbjct: 2 FAVIKTGGKQYRIVANQVVKVEKV-IGNAGDVVEFNDVLMVGQEGSAVIGTPVVADARVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A + E A KVI FKK+RR+N +RT+GHRQE T LR+++I
Sbjct: 61 AEILEQARGRKVIAFKKRRRQNSKRTRGHRQEFTTLRVLEI 101
>sp|Q3A1D6|RL21_PELCD 50S ribosomal protein L21 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rplU PE=3 SV=1
Length = 102
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q+KVS GD + E+++ V D + L++VL++G + + IG P++P A V
Sbjct: 2 YAVIKTGGKQYKVSEGDLVKIEKIEGA-VGDTIELDEVLMVGGE-EVKIGTPLLPGAKVT 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A + + D KV++F KRRK YR+T GHRQ +T+L+I I+
Sbjct: 60 ARIVQQGKDKKVLVFHSKRRKGYRKTYGHRQPITRLQITGIE 101
>sp|Q6G508|RL21_BARHE 50S ribosomal protein L21 OS=Bartonella henselae (strain ATCC 49882
/ Houston 1) GN=rplU PE=3 SV=1
Length = 158
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V + E++ D + N +L+ G + IIG P+V DA V
Sbjct: 2 FAVIKTGGKQYRVVANQVVRVEKI-IGNAGDVVEFNDILMAGQEDNAIIGAPVVRDALVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A + E A KVI FKK+RR+N +RT+GHRQE+T LRI++I
Sbjct: 61 AEIIEQARARKVIAFKKRRRQNSKRTRGHRQEVTTLRILEI 101
>sp|A7HT70|RL21_PARL1 50S ribosomal protein L21 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplU PE=3 SV=1
Length = 103
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTI-IGRPMVPDAAV 196
FAV++ G Q++V+ D + ER E DK+ L +VL+LG + T+ +G P+V A V
Sbjct: 2 FAVIRTGGKQYRVAKDDVLEVER-NGGEAGDKIDL-EVLMLGGEGGTLKVGAPLVDGAKV 59
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQG 240
A + EH K+ IFKK+RR+NYRR GHRQ+L ++I+DI G
Sbjct: 60 KAEIVEHTRGPKITIFKKRRRQNYRRKNGHRQDLMLVKILDIAG 103
>sp|A5N6J9|RL21_CLOK5 50S ribosomal protein L21 OS=Clostridium kluyveri (strain ATCC 8527
/ DSM 555 / NCIMB 10680) GN=rplU PE=3 SV=1
Length = 103
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AVV G Q+KVS GD I+ E+L+ EV+ + L+KVL++ ++G+P+V A V
Sbjct: 2 YAVVATGGKQYKVSEGDIIYVEKLE-AEVDSTIELDKVLMINKDEGLVVGKPVVEGAKVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V + K+I+FK K +K+YR+ +GHRQ TKL+I
Sbjct: 61 AKVLKQGKAKKIIVFKYKPKKDYRKKQGHRQPYTKLQI 98
>sp|B9E018|RL21_CLOK1 50S ribosomal protein L21 OS=Clostridium kluyveri (strain NBRC
12016) GN=rplU PE=3 SV=1
Length = 103
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AVV G Q+KVS GD I+ E+L+ EV+ + L+KVL++ ++G+P+V A V
Sbjct: 2 YAVVATGGKQYKVSEGDIIYVEKLE-AEVDSTIELDKVLMINKDEGLVVGKPVVEGAKVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V + K+I+FK K +K+YR+ +GHRQ TKL+I
Sbjct: 61 AKVLKQGKAKKIIVFKYKPKKDYRKKQGHRQPYTKLQI 98
>sp|A9BHC0|RL21_PETMO 50S ribosomal protein L21 OS=Petrotoga mobilis (strain DSM 10674 /
SJ95) GN=rplU PE=3 SV=1
Length = 104
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+V Q+KV I+TE++K + ++++L+KV+ L + + G+P V A V
Sbjct: 2 YAIVYFNGKQYKVEKDQVIYTEKVKDVDPGNEVVLDKVIYLSKEEEKKAGKPYVEGAKVI 61
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQG 240
V EH D KV I K + RKNYRR KGHRQE T L+I +I+G
Sbjct: 62 TEVVEHGKDRKVKIIKFEGRKNYRREKGHRQEYTALKIKEIEG 104
>sp|Q2RL02|RL21_MOOTA 50S ribosomal protein L21 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplU PE=3 SV=1
Length = 104
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A++ G Q++VS GD++ E+L EV +K++L+KVL +G +G P V A V
Sbjct: 2 YAIIMTGGKQYRVSEGDTLRVEKLP-AEVGEKVVLDKVLAVGEGADLKVGNPYVEGAKVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A V+ K+I+FK K +KNYRR +GHRQ T+L+I I+
Sbjct: 61 ASVQAQDKAPKIIVFKYKPKKNYRRKQGHRQPYTQLQIEKIE 102
>sp|B5YEQ3|RL21_DICT6 50S ribosomal protein L21 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rplU PE=3 SV=1
Length = 105
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
F VV+ G Q+K+S G ++ E+L+ V D+++L+KVLL+G + +IG+P V A V
Sbjct: 2 FVVVETGGKQYKLSVGSTVRVEKLQ-ANVGDEVVLDKVLLVGKDDEVLIGQPYVEGAKVI 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V + KVI+FK KR+K+YRR GHRQ T+L + +I
Sbjct: 61 AEVVKQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSVKEI 101
>sp|Q5WES3|RL21_BACSK 50S ribosomal protein L21 OS=Bacillus clausii (strain KSM-K16)
GN=rplU PE=3 SV=1
Length = 102
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+++ G Q KV G I+ E+L E +++ +KVL +G + + G P V A+V
Sbjct: 2 YAIIETGGKQIKVEEGQEIYVEKLD-AEAGEEVSFDKVLFVGGESAKV-GAPFVEGASVT 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQG 240
VE+H + K+I++K K +KNYRR +GHRQ TK+ I I G
Sbjct: 60 GTVEKHGRNKKIIVYKMKAKKNYRRKQGHRQPYTKVVIGKING 102
>sp|B8DRP1|RL21_DESVM 50S ribosomal protein L21 OS=Desulfovibrio vulgaris (strain
Miyazaki F / DSM 19637) GN=rplU PE=3 SV=1
Length = 102
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+++ G QF+V G IF E+L E +++++KVL+LG ++ G P V A V
Sbjct: 2 YAIIETGGKQFRVEEGAKIFVEKL-VAEAGSEIVIDKVLMLGGGAFSV-GAPYVEGAKVT 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A V EH K+I+FKK RR + R+ +GHRQ+ T L+I IQ
Sbjct: 60 AEVVEHGRGEKLIVFKKWRRNDSRKKQGHRQDFTALKIKAIQ 101
>sp|A6UDV2|RL21_SINMW 50S ribosomal protein L21 OS=Sinorhizobium medicae (strain WSM419)
GN=rplU PE=3 SV=1
Length = 124
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E+L DK+ ++L++G+ IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDVITIEKLD-GAAGDKIEFTEILMVGAGADATIGAPFVEGAVVS 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V +H KVI FKK+RR+N +RT+GHRQ T +RI+DI
Sbjct: 61 AEVVDHGRAKKVIAFKKRRRQNSKRTRGHRQHHTIVRILDI 101
>sp|Q165Y2|RL21_ROSDO 50S ribosomal protein L21 OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rplU PE=3 SV=2
Length = 216
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+KV GD + E+L + + + N+VL+LG ++ T++G P V DA V
Sbjct: 2 FAVLKTGGKQYKVQAGDMLRVEKLA-ADAGETVQFNEVLMLGGEN-TVVGAPFVKDAGVQ 59
Query: 198 AVVEEHALDAKVIIFKKKRRK-NYRRTKGHRQELTKLRIVDI 238
A V + KVI F K+RRK + +RTKGHRQ+LT +++ DI
Sbjct: 60 AEVVDQIKGEKVINFVKRRRKHSSKRTKGHRQKLTLVKVTDI 101
>sp|A1VF58|RL21_DESVV 50S ribosomal protein L21 OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=rplU PE=3 SV=1
Length = 102
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+++ G QF+V G IF E+L E +++++KVL+LG +G P V +A V
Sbjct: 2 YAIIETGGKQFRVEEGSKIFVEKLA-SEAGSEIVIDKVLMLGG-GDVKVGAPYVENAKVT 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V EH KV+IFKK RR + R+ +GHRQ+ T L+I
Sbjct: 60 AEVVEHGRGEKVVIFKKWRRNDSRKKQGHRQDFTALKI 97
>sp|Q72DK2|RL21_DESVH 50S ribosomal protein L21 OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=rplU PE=3
SV=1
Length = 102
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+++ G QF+V G IF E+L E +++++KVL+LG +G P V +A V
Sbjct: 2 YAIIETGGKQFRVEEGSKIFVEKLA-SEAGSEIVIDKVLMLGG-GDVKVGAPYVENAKVT 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V EH KV+IFKK RR + R+ +GHRQ+ T L+I
Sbjct: 60 AEVVEHGRGEKVVIFKKWRRNDSRKKQGHRQDFTALKI 97
>sp|C1FVW8|RL21_CLOBJ 50S ribosomal protein L21 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplU PE=3 SV=1
Length = 104
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQ-TIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G ++ T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNEETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|B1KZR6|RL21_CLOBM 50S ribosomal protein L21 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplU PE=3 SV=1
Length = 104
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|A7GHK5|RL21_CLOBL 50S ribosomal protein L21 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rplU PE=3 SV=1
Length = 104
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|B1ILY8|RL21_CLOBK 50S ribosomal protein L21 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplU PE=3 SV=1
Length = 104
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|C3L3J6|RL21_CLOB6 50S ribosomal protein L21 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplU PE=3 SV=1
Length = 104
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDVLFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|A3PQI7|RL21_RHOS1 50S ribosomal protein L21 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rplU PE=3 SV=1
Length = 131
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+KV GD + E+L CE DK+ N +L++G T+ G P V AAV
Sbjct: 2 FAVLKTGGKQYKVQAGDVLRVEKLA-CEAGDKIQFNDILMVGGDSVTV-GAPFVAGAAVQ 59
Query: 198 AVVEEHALDAKVIIFKKKRRK-NYRRTKGHRQELTKLRIVDI 238
A V K I + K+RRK + +RTKGHRQ+LT LR+ D+
Sbjct: 60 AEVIAQIKGEKTIHYVKRRRKHSSQRTKGHRQQLTLLRVTDV 101
>sp|A5I669|RL21_CLOBH 50S ribosomal protein L21 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rplU PE=3 SV=1
Length = 104
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDILFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|A7FXU9|RL21_CLOB1 50S ribosomal protein L21 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rplU PE=3 SV=1
Length = 104
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQH-QTIIGRPMVPDAAV 196
+AVV G Q+KV+ GD +F E+L +V+ + L+ VLL+G + +T++G+PMV A V
Sbjct: 2 YAVVVTGGKQYKVAEGDILFVEKLT-ADVDSTVELDNVLLVGKDNGETVVGKPMVEGAKV 60
Query: 197 HAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V KV++FK K +K+YR+ +GHRQ TK++I
Sbjct: 61 TAKVLAQGKAKKVVVFKYKPKKDYRKKQGHRQPYTKIQI 99
>sp|B9KW01|RL21_RHOSK 50S ribosomal protein L21 OS=Rhodobacter sphaeroides (strain KD131
/ KCTC 12085) GN=rplU PE=3 SV=1
Length = 131
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+KV GD + E+L CE DK+ N +L++G T+ G P V AAV
Sbjct: 2 FAVLKTGGKQYKVQAGDVLRVEKLA-CEAGDKIQFNDILMVGGDSVTV-GAPFVAGAAVQ 59
Query: 198 AVVEEHALDAKVIIFKKKRRK-NYRRTKGHRQELTKLRIVDI 238
A V K I + K+RRK + +RTKGHRQ+LT LR+ D+
Sbjct: 60 AEVIAQIKGEKTIHYVKRRRKHSSQRTKGHRQQLTLLRVTDV 101
>sp|Q3IXY2|RL21_RHOS4 50S ribosomal protein L21 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rplU PE=3 SV=1
Length = 131
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+KV GD + E+L CE DK+ N +L++G T+ G P V AAV
Sbjct: 2 FAVLKTGGKQYKVQAGDVLRVEKLA-CEAGDKIQFNDILMVGGDSVTV-GAPFVAGAAVQ 59
Query: 198 AVVEEHALDAKVIIFKKKRRK-NYRRTKGHRQELTKLRIVDI 238
A V K I + K+RRK + +RTKGHRQ+LT LR+ D+
Sbjct: 60 AEVIAQIKGEKTIHYVKRRRKHSSQRTKGHRQQLTLLRVTDV 101
>sp|B5ELU4|RL21_ACIF5 50S ribosomal protein L21 OS=Acidithiobacillus ferrooxidans (strain
ATCC 53993) GN=rplU PE=3 SV=1
Length = 103
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q++V+ GD + ER++ E +L L++VL++G +GRP+V AAV
Sbjct: 2 YAVIENGGKQYRVTVGDKLRLERMEM-EPGAELALDRVLMVGVGDDVQVGRPLVEGAAVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A V KV IFK +RRK+YR+ +GHRQ T++RI I+
Sbjct: 61 ATVLSQGRAKKVHIFKMRRRKHYRKQQGHRQYFTEVRITGIE 102
>sp|B7J429|RL21_ACIF2 50S ribosomal protein L21 OS=Acidithiobacillus ferrooxidans (strain
ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplU PE=3 SV=1
Length = 103
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q++V+ GD + ER++ E +L L++VL++G +GRP+V AAV
Sbjct: 2 YAVIENGGKQYRVTVGDKLRLERMEM-EPGAELALDRVLMVGVGDDVQVGRPLVEGAAVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
A V KV IFK +RRK+YR+ +GHRQ T++RI I+
Sbjct: 61 ATVLSQGRAKKVHIFKMRRRKHYRKQQGHRQYFTEVRITGIE 102
>sp|Q18B24|RL21_CLOD6 50S ribosomal protein L21 OS=Clostridium difficile (strain 630)
GN=rplU PE=3 SV=1
Length = 103
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+A+V+ G Q+KVS GD +F E+L+ D + LN+VL + +G P+V A+V
Sbjct: 2 YAIVKTGGKQYKVSEGDVLFVEKLE-ANAGDVVTLNEVLACSKDGELKLGSPVVEGASVQ 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V E KVI+FK K +K+YRR +GHRQ TK+ +
Sbjct: 61 AKVVEQGKAKKVIVFKYKAKKDYRRKQGHRQSYTKIVV 98
>sp|A1URM6|RL21_BARBK 50S ribosomal protein L21 OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=rplU PE=3 SV=1
Length = 157
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V + E++ D + + VL++G IIG P+V DA+V
Sbjct: 2 FAVIKTGGKQYRVVANQVLKVEKI-VGNAGDVVNFSDVLMVGEGDNAIIGAPIVADASVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A + KVI FKK+RR+N +RT+GHRQE+T LRIV+I
Sbjct: 61 AEIIGQERARKVISFKKRRRQNSKRTRGHRQEITTLRIVEI 101
>sp|A9M887|RL21_BRUC2 50S ribosomal protein L21 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplU PE=3 SV=1
Length = 142
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E++ E D + +VL++GS IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDLIKVEKVA-GEAGDIVEFAEVLMVGST----IGAPTVAGALVT 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V E + KVI FKK+RR+N +RT+GHRQELT +RI +I
Sbjct: 57 AEVVEQSRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEI 97
>sp|B5E956|RL21_GEOBB 50S ribosomal protein L21 OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=rplU PE=3 SV=1
Length = 102
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AVV+ G Q+KVS GD + E+L+ V D + +++L++G + +IG P+VP A+V
Sbjct: 2 YAVVKTGGKQYKVSEGDFLKVEKLEGA-VGDTVEFSEILMVGGD-KVVIGTPLVPSASVV 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
+ E D K+++FK KRRKN R+ GHRQ T L+I
Sbjct: 60 GKIVEQGKDKKILVFKSKRRKNTRKLNGHRQLRTILKI 97
>sp|Q8FYL7|RL21_BRUSU 50S ribosomal protein L21 OS=Brucella suis biovar 1 (strain 1330)
GN=rplU PE=3 SV=1
Length = 142
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E++ E D + +VL++GS IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDLIKVEKVA-GEAGDIVEFAEVLMVGST----IGAPTVAGALVT 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V E KVI FKK+RR+N +RT+GHRQELT +RI +I
Sbjct: 57 AEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEI 97
>sp|A9WWX3|RL21_BRUSI 50S ribosomal protein L21 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplU PE=3 SV=1
Length = 142
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E++ E D + +VL++GS IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDLIKVEKVA-GEAGDIVEFAEVLMVGST----IGAPTVAGALVT 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V E KVI FKK+RR+N +RT+GHRQELT +RI +I
Sbjct: 57 AEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEI 97
>sp|Q8YJ85|RL21_BRUME 50S ribosomal protein L21 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rplU PE=3 SV=2
Length = 142
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E++ E D + +VL++GS IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDLIKVEKVA-GEAGDIVEFAEVLMVGST----IGAPTVAGALVT 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V E KVI FKK+RR+N +RT+GHRQELT +RI +I
Sbjct: 57 AEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEI 97
>sp|C0RF98|RL21_BRUMB 50S ribosomal protein L21 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rplU PE=3 SV=1
Length = 142
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q++V+ D I E++ E D + +VL++GS IG P V A V
Sbjct: 2 FAVIKTGGKQYRVAANDLIKVEKVA-GEAGDIVEFAEVLMVGST----IGAPTVAGALVT 56
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A V E KVI FKK+RR+N +RT+GHRQELT +RI +I
Sbjct: 57 AEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEI 97
>sp|B2A6B3|RL21_NATTJ 50S ribosomal protein L21 OS=Natranaerobius thermophilus (strain
ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplU PE=3
SV=1
Length = 105
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q+KVS GD + E+L E +++ +KVLL+ +G P++ +A V
Sbjct: 2 YAVIETGGKQYKVSEGDVLEIEKLS-QETEEQVTFDKVLLVKDDENVKVGTPVLEEAQVE 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDIQ 239
V EH KV +FK K +KNYRR +GHRQ +K++I I+
Sbjct: 61 GTVLEHGKGEKVTVFKYKPKKNYRRKQGHRQPFSKVKIDKIK 102
>sp|Q747M9|RL21_GEOSL 50S ribosomal protein L21 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplU PE=3 SV=1
Length = 102
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV++ G Q+KVS GD + E+L+ V D + L VL++G + IG P+VP A+V
Sbjct: 2 YAVIRTGGKQYKVSEGDFLKVEKLEGA-VGDTVELKDVLMVGGE-TVAIGTPLVPSASVV 59
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
+ + D K+++FK KRRKN+R+ GHRQ T L+I
Sbjct: 60 GRIVDQGKDKKILVFKSKRRKNFRKMYGHRQPRTVLKI 97
>sp|Q7VQN2|RL21_BLOFL 50S ribosomal protein L21 OS=Blochmannia floridanus GN=rplU PE=3
SV=1
Length = 127
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AV QIGS Q+ V G IF +R+K ++ +++ N+VLL+ IG P + + +
Sbjct: 2 YAVFQIGSKQYYVRTGQVIFIDRVKL-DIGNQIEFNQVLLIRDMKNIYIGNPFIQNGKII 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A + +H+L K+ I K +RRK++R+ +GHRQ +TK+++V I
Sbjct: 61 ADILDHSLGKKIRIVKFRRRKHFRKFQGHRQCMTKIKVVKI 101
>sp|Q6G0T8|RL21_BARQU 50S ribosomal protein L21 OS=Bartonella quintana (strain Toulouse)
GN=rplU PE=3 SV=1
Length = 163
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
FAV++ G Q+ V + E++ D + N +L++G + TIIG P+V DA V
Sbjct: 2 FAVIKTGGKQYHVVANQVVKVEKV-IGNAGDVVEFNDILMVGQEDNTIIGAPVVADALVT 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIVDI 238
A + + A KVI FKK+RR+N + T+GHRQE+T LRI++I
Sbjct: 61 AEIIKQARARKVISFKKRRRQNSKCTRGHRQEVTILRILEI 101
>sp|Q8XVK8|RL21_RALSO 50S ribosomal protein L21 OS=Ralstonia solanacearum (strain
GMI1000) GN=rplU PE=3 SV=1
Length = 103
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AVV+ G Q+KV+ G+ + E++ +V ++ L++VL +G+ Q +G P+V AAV
Sbjct: 2 YAVVKTGGKQYKVAAGEKLKVEQIP-ADVGAEITLDQVLAVGAGDQLKVGAPLVSGAAVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V H KV IFK +RRK+Y++ +GHRQ T+LRI
Sbjct: 61 ATVISHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELRI 98
>sp|B2UCV5|RL21_RALPJ 50S ribosomal protein L21 OS=Ralstonia pickettii (strain 12J)
GN=rplU PE=3 SV=1
Length = 103
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVH 197
+AVV+ G Q+KV+ G+ + E++ +V ++ L++VL +G+ Q +G P+V AAV
Sbjct: 2 YAVVKTGGKQYKVAAGEKLKVEQIP-ADVGAEITLDQVLAVGAGDQLKVGAPLVSGAAVK 60
Query: 198 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRI 235
A V H KV IFK +RRK+Y++ +GHRQ T+LRI
Sbjct: 61 ATVISHGRHDKVHIFKMRRRKHYQKRQGHRQNYTELRI 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,968,238
Number of Sequences: 539616
Number of extensions: 4145272
Number of successful extensions: 56046
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 40945
Number of HSP's gapped (non-prelim): 9013
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)