Query 025546
Match_columns 251
No_of_seqs 144 out of 703
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 12:31:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025546.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025546hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e0ea_ a.4.10.1 (A:) N-termin 11.0 27 0.002 21.6 0.2 19 153-173 20-38 (46)
2 d1rrza_ a.7.10.1 (A:) Glycogen 10.7 43 0.0031 22.0 1.2 18 24-41 7-25 (66)
3 d1mlia_ d.58.4.1 (A:) Muconala 9.6 37 0.0027 24.0 0.5 15 34-48 31-45 (96)
4 d1mkya3 d.52.5.1 (A:359-439) P 8.5 1E+02 0.0073 20.6 2.5 19 146-164 52-71 (81)
5 d2cb5a_ d.3.1.1 (A:) Bleomycin 7.5 1.1E+02 0.0083 26.8 3.0 24 130-163 70-93 (453)
6 d1rk8c_ b.72.3.1 (C:) Pym (Wit 7.1 38 0.0028 19.5 -0.3 12 36-47 13-25 (33)
7 d1tjla2 g.39.1.13 (A:111-151) 5.8 1.1E+02 0.0081 17.8 1.4 15 178-192 23-37 (41)
8 d1wpna_ c.107.1.1 (A:) Mangane 5.1 1E+02 0.0076 22.5 1.1 13 26-38 11-23 (187)
9 d3gcba_ d.3.1.1 (A:) Bleomycin 5.1 1.8E+02 0.013 25.3 3.0 24 130-163 76-99 (458)
10 d2p92a1 d.64.2.1 (A:1-106) Hyp 4.5 90 0.0065 21.7 0.3 15 28-42 30-44 (106)
No 1
>d1e0ea_ a.4.10.1 (A:) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=10.97 E-value=27 Score=21.58 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=13.5
Q ss_pred HHHHHHcCCCCCCCCccchhh
Q 025546 153 TQMRKKFNILGSDSSMDDCIY 173 (251)
Q Consensus 153 ~~IR~KynI~GS~~~~~Dc~~ 173 (251)
..+|.+|||+-. -..+.+.
T Consensus 20 ~~L~~~F~lp~~--vAr~IV~ 38 (46)
T d1e0ea_ 20 KELSHKFGIPNL--VARQIVN 38 (46)
T ss_dssp HHHHHHTCCCHH--HHHHHHH
T ss_pred HHHHHHcCCCHH--HHHHHHH
Confidence 378999999865 4555555
No 2
>d1rrza_ a.7.10.1 (A:) Glycogen synthesis protein GlgS {Escherichia coli [TaxId: 562]}
Probab=10.75 E-value=43 Score=22.01 Aligned_cols=18 Identities=33% Similarity=0.695 Sum_probs=14.4
Q ss_pred eeehhhhhhhhHH-hhhcC
Q 025546 24 AVVNFDVLCSTVA-LQTQG 41 (251)
Q Consensus 24 ~~~~~~~~~~~~~-~~~~~ 41 (251)
+.-+||.|-.|.| |+++|
T Consensus 7 s~~NFDFLArSFARM~aeG 25 (66)
T d1rrza_ 7 SLNNFDFLARSFARMHAEG 25 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHhccC
Confidence 3458999999988 66888
No 3
>d1mlia_ d.58.4.1 (A:) Muconalactone isomerase, MLI {Pseudomonas putida [TaxId: 303]}
Probab=9.63 E-value=37 Score=24.03 Aligned_cols=15 Identities=33% Similarity=0.543 Sum_probs=12.4
Q ss_pred hHHhhhcCccccCCC
Q 025546 34 TVALQTQGKWRTPEG 48 (251)
Q Consensus 34 ~~~~~~~~~~~~~~~ 48 (251)
+..||.+|||+.|-.
T Consensus 31 a~~Lq~~G~~~~LWR 45 (96)
T d1mlia_ 31 AQRLQREGTWRHLWR 45 (96)
T ss_pred HHHHHhCCCcEEEEE
Confidence 678999999887765
No 4
>d1mkya3 d.52.5.1 (A:359-439) Probable GTPase Der, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=8.54 E-value=1e+02 Score=20.57 Aligned_cols=19 Identities=37% Similarity=0.405 Sum_probs=15.8
Q ss_pred hhhhHHHHHHHHH-cCCCCC
Q 025546 146 GYLGFLRTQMRKK-FNILGS 164 (251)
Q Consensus 146 iy~~~~R~~IR~K-ynI~GS 164 (251)
-|.-+...+||+. ||+.|.
T Consensus 52 sY~ryL~n~lR~~~f~~~G~ 71 (81)
T d1mkya3 52 PQKIFLRKLIRDYVFPFEGS 71 (81)
T ss_dssp HHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHHHhCCCCcc
Confidence 4556788899998 999998
No 5
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.53 E-value=1.1e+02 Score=26.83 Aligned_cols=24 Identities=21% Similarity=0.427 Sum_probs=20.0
Q ss_pred chhHHHHHHHHHHhhhhhhhHHHHHHHHHcCCCC
Q 025546 130 RHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILG 163 (251)
Q Consensus 130 ~~c~l~~gl~~~~~~~iy~~~~R~~IR~KynI~G 163 (251)
|.|++|.++. .+|..+.+|||++.
T Consensus 70 GrCW~Fa~LN----------~lR~~~~k~~~~~~ 93 (453)
T d2cb5a_ 70 GRSWIFSCLN----------VMRLPFMKKLNIEE 93 (453)
T ss_dssp SCHHHHHHHH----------HHHHHHHHHTTCSC
T ss_pred cccHHHhChH----------HHHHHHHHHcCCCC
Confidence 5799998865 48999999999974
No 6
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=7.11 E-value=38 Score=19.45 Aligned_cols=12 Identities=33% Similarity=0.833 Sum_probs=8.2
Q ss_pred Hhh-hcCccccCC
Q 025546 36 ALQ-TQGKWRTPE 47 (251)
Q Consensus 36 ~~~-~~~~~~~~~ 47 (251)
|-| ..|.|||--
T Consensus 13 atqRpDGtWRK~r 25 (33)
T d1rk8c_ 13 ATKRPDGTWRKAR 25 (33)
T ss_dssp CEECTTSCEECCE
T ss_pred cccCCCCccccce
Confidence 345 778899853
No 7
>d1tjla2 g.39.1.13 (A:111-151) DnaK suppressor protein DksA, zinc finger domain {Escherichia coli [TaxId: 562]}
Probab=5.81 E-value=1.1e+02 Score=17.83 Aligned_cols=15 Identities=13% Similarity=0.395 Sum_probs=11.0
Q ss_pred hhHHHHHHHHHHHHc
Q 025546 178 PCCTLCQEARTLEMN 192 (251)
Q Consensus 178 ~~CaLcQe~RELk~r 192 (251)
..|+-||+.+|-+.+
T Consensus 23 ~~Cv~Cq~~~E~~~r 37 (41)
T d1tjla2 23 DLCIDCKTLAEIREK 37 (41)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 467888888887654
No 8
>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]}
Probab=5.15 E-value=1e+02 Score=22.46 Aligned_cols=13 Identities=31% Similarity=0.649 Sum_probs=11.6
Q ss_pred ehhhhhhhhHHhh
Q 025546 26 VNFDVLCSTVALQ 38 (251)
Q Consensus 26 ~~~~~~~~~~~~~ 38 (251)
-|+|-++|.+||.
T Consensus 11 pD~DaigSalal~ 23 (187)
T d1wpna_ 11 PDTDTICSAIAYA 23 (187)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 4999999999975
No 9
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Probab=5.14 E-value=1.8e+02 Score=25.32 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=19.3
Q ss_pred chhHHHHHHHHHHhhhhhhhHHHHHHHHHcCCCC
Q 025546 130 RHCFLYLAMAFFISIGGYLGFLRTQMRKKFNILG 163 (251)
Q Consensus 130 ~~c~l~~gl~~~~~~~iy~~~~R~~IR~KynI~G 163 (251)
|.|++|.++. .+|..+-++||++.
T Consensus 76 GrCW~FA~ln----------~lr~~~~~~~~~~~ 99 (458)
T d3gcba_ 76 GRAWLFAATN----------QLRLNVLSELNLKE 99 (458)
T ss_dssp SCHHHHHHHH----------HHHHHHHHHTTCSS
T ss_pred cccHHHhChH----------HHHHHHHHHcCCCC
Confidence 5699998865 47999999999974
No 10
>d2p92a1 d.64.2.1 (A:1-106) Hypothetical protein SAV1646 {Staphylococcus aureus [TaxId: 1280]}
Probab=4.46 E-value=90 Score=21.73 Aligned_cols=15 Identities=20% Similarity=0.496 Sum_probs=10.9
Q ss_pred hhhhhhhHHhhhcCc
Q 025546 28 FDVLCSTVALQTQGK 42 (251)
Q Consensus 28 ~~~~~~~~~~~~~~~ 42 (251)
+|++||.|..-+++.
T Consensus 30 ~DIVCAaVS~l~~~~ 44 (106)
T d2p92a1 30 HDIVCAGASAVLFGS 44 (106)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred CcEEEhHHHHHHHHH
Confidence 799999998777774
Done!