Query 025548
Match_columns 251
No_of_seqs 179 out of 1402
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:59:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025548.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025548hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 7.5E-53 1.6E-57 356.0 22.5 231 12-250 3-237 (238)
2 PLN00027 aquaporin TIP; Provis 100.0 5.3E-51 1.1E-55 351.2 26.0 251 1-251 1-252 (252)
3 PLN00166 aquaporin TIP2; Provi 100.0 4.5E-50 9.7E-55 344.4 26.2 247 5-251 3-249 (250)
4 PLN00184 aquaporin NIP1; Provi 100.0 1.4E-48 3E-53 341.4 25.4 222 15-243 49-277 (296)
5 PLN00026 aquaporin NIP; Provi 100.0 9.9E-48 2.1E-52 335.3 23.8 224 16-247 67-290 (298)
6 PLN00167 aquaporin TIP5; Provi 100.0 3.4E-47 7.3E-52 327.4 26.2 232 12-244 14-245 (256)
7 PF00230 MIP: Major intrinsic 100.0 2.1E-47 4.5E-52 325.3 21.1 222 13-234 1-227 (227)
8 PLN00182 putative aquaporin NI 100.0 1.5E-46 3.3E-51 326.7 26.0 216 17-239 39-254 (283)
9 PTZ00016 aquaglyceroporin; Pro 100.0 3.5E-46 7.6E-51 327.0 24.7 221 16-242 46-293 (294)
10 PRK05420 aquaporin Z; Provisio 100.0 8.4E-46 1.8E-50 315.1 25.2 215 20-241 2-230 (231)
11 COG0580 GlpF Glycerol uptake f 100.0 4.5E-46 9.8E-51 313.9 21.7 218 18-239 3-240 (241)
12 KOG0224 Aquaporin (major intri 100.0 4.9E-47 1.1E-51 323.0 13.5 224 15-243 27-279 (316)
13 PLN00183 putative aquaporin NI 100.0 3.7E-44 7.9E-49 310.7 24.3 222 14-243 39-260 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2E-42 4.3E-47 294.8 21.5 212 21-237 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 3E-41 6.5E-46 285.3 21.3 209 25-234 1-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.7 3.4E-16 7.4E-21 137.4 9.2 103 139-241 51-157 (296)
17 PLN00026 aquaporin NIP; Provi 99.7 3.1E-16 6.6E-21 137.5 8.7 106 135-240 64-173 (298)
18 PLN00182 putative aquaporin NI 99.6 2E-15 4.3E-20 131.8 9.8 99 17-126 156-254 (283)
19 PLN00183 putative aquaporin NI 99.6 2.4E-15 5.3E-20 130.8 9.4 112 18-140 159-270 (274)
20 cd00333 MIP Major intrinsic pr 99.6 4.9E-15 1.1E-19 126.3 9.6 100 16-123 126-227 (228)
21 PLN00167 aquaporin TIP5; Provi 99.6 2.1E-14 4.6E-19 124.0 10.5 103 138-240 18-129 (256)
22 PLN00166 aquaporin TIP2; Provi 99.5 1.4E-14 3E-19 124.8 8.5 102 139-240 15-125 (250)
23 PRK05420 aquaporin Z; Provisio 99.5 4.3E-14 9.4E-19 120.5 9.0 99 142-240 2-105 (231)
24 TIGR00861 MIP MIP family chann 99.5 4E-14 8.6E-19 119.7 8.5 97 16-120 118-215 (216)
25 PTZ00016 aquaglyceroporin; Pro 99.5 3E-14 6.6E-19 125.3 7.8 102 140-241 48-153 (294)
26 KOG0223 Aquaporin (major intri 99.5 2.2E-14 4.7E-19 121.9 5.7 106 11-128 123-228 (238)
27 PLN00027 aquaporin TIP; Provis 99.5 9.8E-14 2.1E-18 119.8 9.7 100 140-239 18-126 (252)
28 COG0580 GlpF Glycerol uptake f 99.5 1.5E-13 3.3E-18 116.5 7.4 107 140-246 3-116 (241)
29 KOG0224 Aquaporin (major intri 99.4 3.5E-13 7.6E-18 116.0 6.0 105 140-244 30-139 (316)
30 PF00230 MIP: Major intrinsic 99.2 7E-11 1.5E-15 100.5 9.7 100 13-121 128-227 (227)
31 COG2116 FocA Formate/nitrite f 87.6 18 0.0004 31.5 13.8 177 57-241 63-260 (265)
32 PRK10805 formate transporter; 84.0 29 0.00064 30.6 14.2 100 58-161 68-181 (285)
33 PRK11562 nitrite transporter N 82.9 32 0.00068 30.1 14.4 177 59-246 59-257 (268)
34 PRK09713 focB putative formate 75.9 56 0.0012 28.8 14.8 101 58-161 67-180 (282)
35 PF04632 FUSC: Fusaric acid re 41.9 3.4E+02 0.0073 26.4 15.0 122 85-240 371-492 (650)
36 PF03033 Glyco_transf_28: Glyc 40.1 11 0.00024 28.5 0.4 19 79-97 7-25 (139)
37 PF09163 Form-deh_trans: Forma 27.8 98 0.0021 19.2 3.1 24 224-247 20-43 (44)
38 KOG3030 Lipid phosphate phosph 27.7 1.3E+02 0.0028 27.1 5.1 48 195-242 210-266 (317)
39 PRK11427 multidrug efflux syst 27.5 6.4E+02 0.014 25.3 11.4 28 99-126 394-421 (683)
40 PRK12446 undecaprenyldiphospho 26.1 16 0.00035 33.0 -0.9 21 76-96 7-27 (352)
41 TIGR00851 mtlA PTS system, man 25.2 4.1E+02 0.0089 24.0 8.0 25 215-239 304-328 (338)
42 COG3301 NrfD Formate-dependent 22.5 5.6E+02 0.012 22.8 8.3 46 195-242 224-272 (305)
43 TIGR02587 putative integral me 22.1 5.4E+02 0.012 22.6 7.6 58 97-154 96-153 (271)
44 PRK14218 camphor resistance pr 20.0 4.2E+02 0.0091 20.4 7.5 118 99-237 5-126 (133)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-53 Score=356.02 Aligned_cols=231 Identities=49% Similarity=0.820 Sum_probs=209.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHH
Q 025548 12 REATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFG 91 (251)
Q Consensus 12 ~~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~ 91 (251)
.+..+.+.+|++++||++|++++|++|++...... ...+.+.+.+++.+|+.+++.+++++++||||+|||||++
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a 77 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLA 77 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHH
Confidence 56678899999999999999999999998875432 2346778899999999999999999999999999999999
Q ss_pred HHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCC----cccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025548 92 AFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ----TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK 167 (251)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~ 167 (251)
+++.|++++.++..|+++|++|+++|+.+.+.+.+.+ ......++++.+.+|+++.|++.|+.|+++++.++.|+|
T Consensus 78 ~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~ 157 (238)
T KOG0223|consen 78 FAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPR 157 (238)
T ss_pred HHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCC
Confidence 9999999999999999999999999999999999864 233456788899999999999999999999999788988
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCCCCCC
Q 025548 168 KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLP 247 (251)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~~~~ 247 (251)
++ .+.|+.||+.+.+.+++++++||++|||||+|||++..+.|+++||||++|++|+++++++|+.++.++.+++.+
T Consensus 158 ~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~~~~ 234 (238)
T KOG0223|consen 158 RS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDESEPTK 234 (238)
T ss_pred Cc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCccccccC
Confidence 75 689999999999999999999999999999999999999999999999999999999999999999988666555
Q ss_pred CCC
Q 025548 248 TTE 250 (251)
Q Consensus 248 ~~~ 250 (251)
+.+
T Consensus 235 ~~~ 237 (238)
T KOG0223|consen 235 SAD 237 (238)
T ss_pred ccC
Confidence 544
No 2
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=5.3e-51 Score=351.17 Aligned_cols=251 Identities=85% Similarity=1.399 Sum_probs=213.1
Q ss_pred CCcccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhccc
Q 025548 1 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANIS 80 (251)
Q Consensus 1 ~p~~~~~~~~~~~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~s 80 (251)
||.+++..++.+|...++.+|++++||++|++++|.++++.+......++.+....+.+..++++|+++.+.+++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iS 80 (252)
T PLN00027 1 MPIRRIAIGTPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANIS 80 (252)
T ss_pred CCcccccCCchHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccC
Confidence 56666766666776678899999999999999999999887643222211111234566789999999999999999999
Q ss_pred ccccchHHHHHHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHH
Q 025548 81 GGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVY 160 (251)
Q Consensus 81 Gah~NPavtl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~ 160 (251)
|+|+|||+|+++++.|+++|.+.+.|+++|++|+++|+.+.+...++.....+.+.++.+..++++.|+++|++|+++++
T Consensus 81 Gah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~ 160 (252)
T PLN00027 81 GGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVY 160 (252)
T ss_pred ccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988765544556677788999999999999999999998
Q ss_pred hhccCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhC
Q 025548 161 ATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
.+..|+++...+...|+.+|+.+...+++++++||++|||||+|||++++++|+++|+||+||++|+++++++|++++.+
T Consensus 161 ~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 161 ATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HhccccccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 87667665434457899999999999999999999999999999999999999999999999999999999999999865
Q ss_pred -CCCCCCCCCCC
Q 025548 241 -QSHEQLPTTEY 251 (251)
Q Consensus 241 -~~~~~~~~~~~ 251 (251)
+.+++.+..||
T Consensus 241 ~~~~~~~~~~~~ 252 (252)
T PLN00027 241 STTHEQLPTTDY 252 (252)
T ss_pred CccccccCCCCC
Confidence 34455666665
No 3
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=4.5e-50 Score=344.38 Aligned_cols=247 Identities=61% Similarity=1.022 Sum_probs=205.2
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhccccccc
Q 025548 5 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHV 84 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~ 84 (251)
|+...+.+|..+.+.+|++++||+|||+++|.++++........+++.....+.+..++++|+.+++.+++++++||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~ 82 (250)
T PLN00166 3 KIEFGSLGDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHL 82 (250)
T ss_pred ccccCchHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhccccccc
Confidence 34444445556688899999999999999999999876422221111111234667899999999999999999999999
Q ss_pred chHHHHHHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhcc
Q 025548 85 NPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL 164 (251)
Q Consensus 85 NPavtl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~ 164 (251)
|||+|+++++.|+++|.+.+.|+++|++|+++|+.+.+.+++++........++.+..++++.|+++|++|+++++.+..
T Consensus 83 NPAvt~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~ 162 (250)
T PLN00166 83 NPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAA 162 (250)
T ss_pred CHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999888653323233445678899999999999999999998766
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCCC
Q 025548 165 DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 244 (251)
Q Consensus 165 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 244 (251)
|+|+...+...|+.+|+++.+.++.++++||+++||||+|||++++++|+++|+||++|++|+++++++|+.++.+..++
T Consensus 163 ~~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~~ 242 (250)
T PLN00166 163 DPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAA 242 (250)
T ss_pred cccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcccCCC
Confidence 65543334578999999999999999999999999999999999999999999999999999999999999997766665
Q ss_pred CCCCCCC
Q 025548 245 QLPTTEY 251 (251)
Q Consensus 245 ~~~~~~~ 251 (251)
...++||
T Consensus 243 ~~~~~~~ 249 (250)
T PLN00166 243 APTSEDY 249 (250)
T ss_pred CCCCccc
Confidence 5555666
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.4e-48 Score=341.36 Aligned_cols=222 Identities=28% Similarity=0.408 Sum_probs=189.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHH
Q 025548 15 THPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFV 94 (251)
Q Consensus 15 ~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l 94 (251)
.+.+++|++++||+|||+|+|+++++..... . ++ ...+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~-~-~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al 123 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNM-Q-ND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFAS 123 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-CC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHH
Confidence 3456889999999999999999998775321 1 11 12356778999999999999999999999999999999999
Q ss_pred hcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcc------c-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025548 95 GGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT------S-AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK 167 (251)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~ 167 (251)
.|+++|.+.+.|+++|++|+++|+++++.+++.... . .+.+.+..+.+++|+.|+++|++|+++++.+..|++
T Consensus 124 ~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~ 203 (296)
T PLN00184 124 CGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNR 203 (296)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCc
Confidence 999999999999999999999999999998853211 1 123334458899999999999999999998755543
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCC
Q 025548 168 KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSH 243 (251)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~ 243 (251)
. .+...++.||+++.+.++..+++||++|||||||||+++.+.|+++||||+||++|+++++++|++++.++.+
T Consensus 204 ~--~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~ 277 (296)
T PLN00184 204 A--IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKP 277 (296)
T ss_pred C--CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCc
Confidence 2 3347899999999999999999999999999999999999999999999999999999999999999865543
No 5
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=9.9e-48 Score=335.33 Aligned_cols=224 Identities=27% Similarity=0.418 Sum_probs=189.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHh
Q 025548 16 HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVG 95 (251)
Q Consensus 16 ~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~ 95 (251)
..+++|++++||+|||+|+|+++++....... ....+.+..++++|+++++.+++++++||||+|||||+++++.
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~-----~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~ 141 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY-----DGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAAL 141 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 45688999999999999999998755422111 1123566678999999999999999999999999999999999
Q ss_pred cCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchH
Q 025548 96 GNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIA 175 (251)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~~~ 175 (251)
++++|.+.+.|+++|++|+++|+++++.++++...... +.+..+..++++.|+++|++|+++++.+..|+++ .+...
T Consensus 142 g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~-t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~ 218 (298)
T PLN00026 142 RHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSGGV-TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELA 218 (298)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCce-eeecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCcc
Confidence 99999999999999999999999999999864222111 2346788999999999999999999876555443 23457
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCCCCCC
Q 025548 176 PIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLP 247 (251)
Q Consensus 176 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~~~~ 247 (251)
++.+|+++.+.++..++.||+++||||+|+|+++.++|+++|+||+||++|+++++++|+.+..++++.+.+
T Consensus 219 ~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~ 290 (298)
T PLN00026 219 GIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPP 290 (298)
T ss_pred chHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccCh
Confidence 899999999999999999999999999999999999999999999999999999999999997666554443
No 6
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=3.4e-47 Score=327.41 Aligned_cols=232 Identities=51% Similarity=0.887 Sum_probs=194.9
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHH
Q 025548 12 REATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFG 91 (251)
Q Consensus 12 ~~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~ 91 (251)
++...++.+|++++||+|||+++|+++++........++....+.+++.+++.+|+++.+.+++++++||+|+|||||++
T Consensus 14 ~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~ 93 (256)
T PLN00167 14 QQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFG 93 (256)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHH
Confidence 44456789999999999999999999998764322211111123457788999999999999999999999999999999
Q ss_pred HHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 025548 92 AFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSL 171 (251)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~ 171 (251)
+++.|+++|.+.+.|+++|++|+++|+.+++.++++.........++.+..++++.|+++|++|+++++.. .|++++..
T Consensus 94 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~-~~~~~~~~ 172 (256)
T PLN00167 94 MAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAA-GDPRRGLL 172 (256)
T ss_pred HHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHh-ccccccCC
Confidence 99999999999999999999999999999998876432222233345577899999999999999999875 55554434
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCCC
Q 025548 172 GTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 244 (251)
Q Consensus 172 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 244 (251)
+...|+.+|+.+.+..+..+++||+++||||+|+|+++.+.|+++|+||+||++|+++++++|++++.++.++
T Consensus 173 ~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~ 245 (256)
T PLN00167 173 GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245 (256)
T ss_pred CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 4568999999999999999999999999999999999999999999999999999999999999998765443
No 7
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=2.1e-47 Score=325.31 Aligned_cols=222 Identities=42% Similarity=0.659 Sum_probs=190.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCC-CCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHH
Q 025548 13 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHN-GANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFG 91 (251)
Q Consensus 13 ~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~ 91 (251)
|.++.+++|++++||+||++++|.++++.........+ +.+...+....++.+|+.+...++.++++||||+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 46788999999999999999999999876643332221 11222467788999999999999999999999999999999
Q ss_pred HHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCC--ccc--ccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025548 92 AFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ--TTS--AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK 167 (251)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~ 167 (251)
.++.|+++|++.+.|+++|++|+++|+.+.+.++++. ... ...+.++.+..++++.|+++|++|+++++.+..+++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 9999999999999999999999999999999998752 222 234677889999999999999999999998755555
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHH
Q 025548 168 KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 234 (251)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~ 234 (251)
+...+...|+.+|+++.+..+..++.||+++||||+|+++++.+.|+++|+||++|++|+++|+++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 4433557899999999999999999999999999999999999999999999999999999999987
No 8
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.5e-46 Score=326.66 Aligned_cols=216 Identities=31% Similarity=0.465 Sum_probs=187.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhc
Q 025548 17 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGG 96 (251)
Q Consensus 17 ~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g 96 (251)
.+++|++++||+|||+|+|.++++..... ..+ ...+....++++|+++++.+++++++||||+|||||+++++.|
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~-~~~----~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~ 113 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNV-LYG----GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFR 113 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccC----CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHc
Confidence 36779999999999999999998776322 111 1234567788999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchHH
Q 025548 97 NISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAP 176 (251)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~~~~ 176 (251)
+++|.+.+.|+++|++|+++|+++++.+++......+...+..+.+++++.|+++|++|+++++.+..+++. .+...+
T Consensus 114 ~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~ 191 (283)
T PLN00182 114 RFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAG 191 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchh
Confidence 999999999999999999999999999986433334445556688999999999999999999876555432 234579
Q ss_pred HHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhh
Q 025548 177 IAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 239 (251)
Q Consensus 177 ~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~ 239 (251)
+.+|+++.+.+++.+++||+++||||+|+|+++.+.|+++|+||++|++|+++++++|+++..
T Consensus 192 l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 192 IAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999974
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=3.5e-46 Score=327.03 Aligned_cols=221 Identities=29% Similarity=0.431 Sum_probs=187.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHh
Q 025548 16 HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVG 95 (251)
Q Consensus 16 ~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~ 95 (251)
.++++|++++||+||++++|+++++..... ..+ ...+.+..++++|+++.+.+++++++||+|+|||||+++++.
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~-~~~----~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~ 120 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTH-TVG----NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVF 120 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccC----CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHh
Confidence 367889999999999999999998765321 111 124566789999999999999999999999999999999999
Q ss_pred cCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCC----c-------------ccccccCCCCchHHHHHHHHHHHHHHHHH
Q 025548 96 GNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ----T-------------TSAFALSSGVGAWNAVVFEIVMTFGLVYT 158 (251)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~E~~~T~~lv~~ 158 (251)
|+++|.+.+.|+++|++|+++|+++++.++++. + ...+.+.++.+..++++.|+++|++|+++
T Consensus 121 g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ 200 (294)
T PTZ00016 121 GKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLV 200 (294)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987531 0 01234455678899999999999999999
Q ss_pred HHhhccCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcc------cCCC----ceeecchhhhHHHH
Q 025548 159 VYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVS------WSWD----NHWVYWVGPLIGGG 228 (251)
Q Consensus 159 v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~------~~~~----~~wvy~~~p~~Ga~ 228 (251)
++.+ .|+++.......|+.+|+++.+..+..++.||++||||||||||++. +.|+ ++||||+||++|++
T Consensus 201 ila~-~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~ 279 (294)
T PTZ00016 201 ILAI-TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAV 279 (294)
T ss_pred HHHh-ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHH
Confidence 9986 66665433456799999999999999999999999999999999985 2454 68999999999999
Q ss_pred HHHHHHHHHhhCCC
Q 025548 229 LAGIVYEFFFINQS 242 (251)
Q Consensus 229 la~~~~~~~~~~~~ 242 (251)
+|+++|++++.+++
T Consensus 280 ~aally~~ll~~~~ 293 (294)
T PTZ00016 280 LGMFLYDKFIPPLI 293 (294)
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999987765
No 10
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=8.4e-46 Score=315.06 Aligned_cols=215 Identities=29% Similarity=0.541 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcCCc
Q 025548 20 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNIS 99 (251)
Q Consensus 20 ~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~~~ 99 (251)
+|++++||+||++++|.++++....... + +.+.+.+..++++|+++.+.+++++++||+|+|||||+++++.|+++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~-~---~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~ 77 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAF-P---ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFP 77 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhccc-C---CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCC
Confidence 6899999999999999999876432111 1 12335667899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhHhHHHHHHHHHHHhcCCcc-c----cc------ccC-CCCchHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025548 100 LLRGILYWIAQLLGSTVACLLLKFVTNGQTT-S----AF------ALS-SGVGAWNAVVFEIVMTFGLVYTVYATALDPK 167 (251)
Q Consensus 100 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~-~----~~------~~~-~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~ 167 (251)
|.+.+.|+++|++|+++|+.+.+.++++... . .+ ... ...+..++++.|+++|++|+++++.. .|++
T Consensus 78 ~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~ 156 (231)
T PRK05420 78 AKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKR 156 (231)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 9999999999999999999999988754211 0 01 111 23478899999999999999999976 5655
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCC--CceeecchhhhHHHHHHHHHHHHHhhCC
Q 025548 168 KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSW--DNHWVYWVGPLIGGGLAGIVYEFFFINQ 241 (251)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~--~~~wvy~~~p~~Ga~la~~~~~~~~~~~ 241 (251)
+ .+...|+.+|+.+.+..+.++++||++|||||||+|++++++| +++|+||++|++|+++++++|++++.++
T Consensus 157 ~--~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 157 A--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred C--CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 3 2347899999999999999999999999999999999998766 5899999999999999999999986553
No 11
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-46 Score=313.88 Aligned_cols=218 Identities=31% Similarity=0.478 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcC
Q 025548 18 DALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGN 97 (251)
Q Consensus 18 ~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~ 97 (251)
++.|++++||+||++|++.++++++..... + .++...+++.+++++|+++.+.+++++++||||+|||||++.++.|+
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~-~-~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~ 80 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALK-G-SKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR 80 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhc-c-ccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC
Confidence 467888999999999999999998854432 2 12345677778999999999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHhHhHHHHHHHHHHHhcCC----c------ccccccCCC-CchHHHHHHHHHHHHHHHHHHHhhccCC
Q 025548 98 ISLLRGILYWIAQLLGSTVACLLLKFVTNGQ----T------TSAFALSSG-VGAWNAVVFEIVMTFGLVYTVYATALDP 166 (251)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~------~~~~~~~~~-~~~~~~~~~E~~~T~~lv~~v~~~~~~~ 166 (251)
++|++++.||++|++|+++|+.+++.++.+. + ...+++.|+ .+..++|+.|+++|++|++.++++..|+
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~ 160 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDG 160 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999988631 1 223455554 4788999999999999999999875544
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc---------CCCceeecchhhhHHHHHHHHHHHHH
Q 025548 167 KKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW---------SWDNHWVYWVGPLIGGGLAGIVYEFF 237 (251)
Q Consensus 167 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~---------~~~~~wvy~~~p~~Ga~la~~~~~~~ 237 (251)
+. .....|+.+|+.+....++.++.||.++|||||+|||+.+. +++|+|+||++|++|+++++++|+.+
T Consensus 161 ~~--~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 161 NA--NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred cc--cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 43 33489999999999999999999999999999999999633 23589999999999999999999987
Q ss_pred hh
Q 025548 238 FI 239 (251)
Q Consensus 238 ~~ 239 (251)
+.
T Consensus 239 ~~ 240 (241)
T COG0580 239 LG 240 (241)
T ss_pred cc
Confidence 64
No 12
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-47 Score=322.98 Aligned_cols=224 Identities=29% Similarity=0.441 Sum_probs=194.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHH
Q 025548 15 THPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFV 94 (251)
Q Consensus 15 ~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l 94 (251)
.++++.|++++||+||++|+++++++++..... + ....+++.+.++||+++++.+++.+++||||+|||||+++++
T Consensus 27 i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls-~---g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~ 102 (316)
T KOG0224|consen 27 IRNELLREFLAEFLGTFVLVVFGLGSVAQAVLS-G---GTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCI 102 (316)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhccceeEEEEec-c---CCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 467899999999999999999999998854332 2 134556777899999999999999999999999999999999
Q ss_pred hcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCC----------------ccccc--ccCCCCchHHHHHHHHHHHHHHH
Q 025548 95 GGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ----------------TTSAF--ALSSGVGAWNAVVFEIVMTFGLV 156 (251)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----------------~~~~~--~~~~~~~~~~~~~~E~~~T~~lv 156 (251)
.||++|+|.++|+++|++||++|++.+|..+.+. ....| .|+|..+.+++|+.|+++|.+|+
T Consensus 103 ~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~ 182 (316)
T KOG0224|consen 103 LGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLV 182 (316)
T ss_pred hcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887421 11223 46778999999999999999999
Q ss_pred HHHHhhccCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-----------CCCceeecchhhhH
Q 025548 157 YTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-----------SWDNHWVYWVGPLI 225 (251)
Q Consensus 157 ~~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-----------~~~~~wvy~~~p~~ 225 (251)
..++.+ .|+|+..+..+.|+.+|+.+.+..++.+..+|..+||||||+||++.. .-.+.|++|++|++
T Consensus 183 ~~l~aI-~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~ 261 (316)
T KOG0224|consen 183 LCLFAI-TDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLI 261 (316)
T ss_pred hheeEE-ecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhh
Confidence 999875 888887778899999999999999999999999999999999999932 11578999999999
Q ss_pred HHHHHHHHHHHHhhCCCC
Q 025548 226 GGGLAGIVYEFFFINQSH 243 (251)
Q Consensus 226 Ga~la~~~~~~~~~~~~~ 243 (251)
|+++++++|+++...+.+
T Consensus 262 Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 262 GAILGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhhhhheeeeeccCC
Confidence 999999999998765544
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=3.7e-44 Score=310.67 Aligned_cols=222 Identities=28% Similarity=0.459 Sum_probs=188.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHH
Q 025548 14 ATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAF 93 (251)
Q Consensus 14 ~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~ 93 (251)
..+.+.+|.+++||++||+++|+++++..... ..+ ...+.+..++.+|+.+.+.+++++++||+|+|||+|++++
T Consensus 39 ~~~~~~~~~~laEfigTfllvf~~~g~~~~~~-~~~----~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~ 113 (274)
T PLN00183 39 DMDLNPARMVLAEMVGTFILMFCVCGIIASTQ-LSG----GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFA 113 (274)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccC----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHH
Confidence 34567889999999999999999998765322 111 1235566789999999999999999999999999999999
Q ss_pred HhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCc
Q 025548 94 VGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT 173 (251)
Q Consensus 94 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~ 173 (251)
+.|+++|.+.+.|+++|++|+++|+.+.+.+++... ..+.+.+..+.+++++.|+++|++|++.++.+..++++ .+.
T Consensus 114 l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~--~~~ 190 (274)
T PLN00183 114 TFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQS--LGH 190 (274)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccC--CCC
Confidence 999999999999999999999999999999887432 23344455567899999999999999999876443322 234
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCCC
Q 025548 174 IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSH 243 (251)
Q Consensus 174 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~ 243 (251)
..++.+|+++.+.+++.+++||+++||||+|+|++.+.+|+++|+||++|++|+++++++|++++.+...
T Consensus 191 ~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 191 LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 5689999999999999999999999999999999999999999999999999999999999999876654
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2e-42 Score=294.78 Aligned_cols=212 Identities=46% Similarity=0.719 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcCCcc
Q 025548 21 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNISL 100 (251)
Q Consensus 21 ~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~~~~ 100 (251)
|++++||+||+++++.++++....+. .+ +.+.+.+..++.+|+.+.+.+++++++||+|+|||+|+++++.|+++|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~-~~---~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~ 76 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKL-AG---GASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPL 76 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccc-cC---CCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCH
Confidence 57899999999999999988764321 11 123446678999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHhcCCcc----c------c--cccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025548 101 LRGILYWIAQLLGSTVACLLLKFVTNGQTT----S------A--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK 168 (251)
Q Consensus 101 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~----~------~--~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~ 168 (251)
.+.+.|+++|++|+++|+.+.+.++++... . . ..+.++.+..++++.|+++|++|++.++... ++++
T Consensus 77 ~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~-~~~~ 155 (228)
T cd00333 77 IRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATT-DDPN 155 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHc-cccc
Confidence 999999999999999999999998753211 1 1 1245567889999999999999999999864 4433
Q ss_pred C-CCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccC---CCceeecchhhhHHHHHHHHHHHHH
Q 025548 169 G-SLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWS---WDNHWVYWVGPLIGGGLAGIVYEFF 237 (251)
Q Consensus 169 ~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~---~~~~wvy~~~p~~Ga~la~~~~~~~ 237 (251)
. ......++.+|+.+.+.++.+++.||+++||||++++++.++. |+++|+||++|++|+++++++|+++
T Consensus 156 ~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 156 GPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 2 2345689999999999999999999999999999999999875 9999999999999999999999863
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=3e-41 Score=285.29 Aligned_cols=209 Identities=39% Similarity=0.627 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcCCcchhhH
Q 025548 25 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNISLLRGI 104 (251)
Q Consensus 25 ~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~~~~~~~~ 104 (251)
+||+||++++|.++++..............+.+....++.+|+.+...+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987643221100111122566789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhHHHHHHHHHHHhcCCcc---c-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCC-CCCchHHHHH
Q 025548 105 LYWIAQLLGSTVACLLLKFVTNGQTT---S-AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKG-SLGTIAPIAI 179 (251)
Q Consensus 105 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~-~~~~~~~~~i 179 (251)
.|+++|++|+++|+.+.+.++++... . ...++++.+..++++.|+++|++|+++++.. .++++. ..+...++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCCccHHHHH
Confidence 99999999999999999988865311 1 1122345688999999999999999999876 444332 2233689999
Q ss_pred HHHHHHHHHHhcCCCCCccchhhhHHHHHccc--CCCceeecchhhhHHHHHHHHHH
Q 025548 180 GFIVGANILAGGAFDGASMNPAVSFGPALVSW--SWDNHWVYWVGPLIGGGLAGIVY 234 (251)
Q Consensus 180 g~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~--~~~~~wvy~~~p~~Ga~la~~~~ 234 (251)
|+.+...++..+++||+++||||+++++++++ +|+++|+||++|++|+++++.+|
T Consensus 160 G~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 160 GLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999987 89999999999999999998875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.66 E-value=3.4e-16 Score=137.41 Aligned_cols=103 Identities=24% Similarity=0.302 Sum_probs=85.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCCch--HHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-CCC
Q 025548 139 VGAWNAVVFEIVMTFGLVYTVYATALDPK-KGSLGTI--APIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-SWD 214 (251)
Q Consensus 139 ~~~~~~~~~E~~~T~~lv~~v~~~~~~~~-~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 214 (251)
.+..+.++.|+++|++|++++++...... +...... .++.+|+++.+.+++.+++||+|+|||+++++++.++ .|.
T Consensus 51 ~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~ 130 (296)
T PLN00184 51 VPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLK 130 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHH
Confidence 35678999999999999999887543221 1111123 4566699999999999999999999999999999887 899
Q ss_pred ceeecchhhhHHHHHHHHHHHHHhhCC
Q 025548 215 NHWVYWVGPLIGGGLAGIVYEFFFINQ 241 (251)
Q Consensus 215 ~~wvy~~~p~~Ga~la~~~~~~~~~~~ 241 (251)
+.|+||++|++|+++|+++++.++..+
T Consensus 131 ~~~~YiiaQllGA~lga~~~~~l~~~~ 157 (296)
T PLN00184 131 QVPAYVISQVIGSTLAAATLRLLFGLD 157 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999999988543
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.65 E-value=3.1e-16 Score=137.49 Aligned_cols=106 Identities=21% Similarity=0.216 Sum_probs=87.4
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHhhccCC-CCC-CCCc-hHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc
Q 025548 135 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDP-KKG-SLGT-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW 211 (251)
Q Consensus 135 ~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~-~~~-~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 211 (251)
+.++.+.++.++.|+++|++|+++++.....+ +.. ..+. ..++.+|+++.+.+++.+++||+|+||||++++++.++
T Consensus 64 ~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 64 PPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 34456788999999999999999988643322 111 1111 23578999999999999999999999999999999876
Q ss_pred -CCCceeecchhhhHHHHHHHHHHHHHhhC
Q 025548 212 -SWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 212 -~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
.|.+.|+||++|++|+++|+++++.++.+
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999999998865
No 18
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.62 E-value=2e-15 Score=131.80 Aligned_cols=99 Identities=19% Similarity=0.294 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhc
Q 025548 17 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGG 96 (251)
Q Consensus 17 ~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g 96 (251)
.+..+.++.|+++|++|++.+++..... +. ... ..++.+|+.+++.++..+++||+|+|||+|+++++.+
T Consensus 156 ~s~~~a~~~E~l~TfiLv~~i~~~~~~~----~~----~~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~ 225 (283)
T PLN00182 156 DSSGQALVAEIIISFLLMFVISGVATDS----RA----VGE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVM 225 (283)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhheecc----cc----CCc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHh
Confidence 4678999999999999999987654311 00 111 2578999999999999999999999999999999986
Q ss_pred CCcchhhHHHHHHHhHhHHHHHHHHHHHhc
Q 025548 97 NISLLRGILYWIAQLLGSTVACLLLKFVTN 126 (251)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 126 (251)
+ .|.+.|+||++|++|+++|+++.+.+..
T Consensus 226 ~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 226 G-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred c-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 6889999999999999999999998864
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.61 E-value=2.4e-15 Score=130.76 Aligned_cols=112 Identities=21% Similarity=0.283 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcC
Q 025548 18 DALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGN 97 (251)
Q Consensus 18 ~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~ 97 (251)
+.++.++.|+++|+++++.+++..... ++ .+. ..++.+|+.+.+.++..+++||+|+|||+|+++++.+
T Consensus 159 ~~~~~~~~E~v~T~iLv~~i~~~~~~~----~~-----~~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~- 227 (274)
T PLN00183 159 GCSSAFWVEFIATFIVMFLAASLTSQP----QS-----LGH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS- 227 (274)
T ss_pred cHHHHHHHHHHHHHHHHHhhheeeccc----cC-----CCC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-
Confidence 467899999999999999987654321 00 111 2367899999999999999999999999999999987
Q ss_pred CcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCc
Q 025548 98 ISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG 140 (251)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
.+|.+.|+||++|++|+++|+.+.+.++.+........+|+.|
T Consensus 228 ~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 228 WDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred CChhheehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 5899999999999999999999999998755444444555544
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.59 E-value=4.9e-15 Score=126.29 Aligned_cols=100 Identities=23% Similarity=0.315 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHh
Q 025548 16 HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVG 95 (251)
Q Consensus 16 ~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~ 95 (251)
+.+.+|.++.|+++|+++++..+......+ ........++.+|+.+....+..++.||+|+|||+++++.+.
T Consensus 126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~--------~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~ 197 (228)
T cd00333 126 GVSNGNAFFVEFIGTFILVLVVFATTDDPN--------GPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALF 197 (228)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHccccc--------cCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHH
Confidence 457889999999999999999886543110 011222468899999999999999999999999999999999
Q ss_pred cCC--cchhhHHHHHHHhHhHHHHHHHHHH
Q 025548 96 GNI--SLLRGILYWIAQLLGSTVACLLLKF 123 (251)
Q Consensus 96 g~~--~~~~~~~yi~aQ~~Ga~~g~~~~~~ 123 (251)
++. +|.+.|+|+++|++|+++|+++.+.
T Consensus 198 ~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 198 TGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred hccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 987 7999999999999999999988764
No 21
>PLN00167 aquaporin TIP5; Provisional
Probab=99.56 E-value=2.1e-14 Score=123.97 Aligned_cols=103 Identities=22% Similarity=0.393 Sum_probs=86.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhccCCCC----CC----CCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHc
Q 025548 138 GVGAWNAVVFEIVMTFGLVYTVYATALDPKK----GS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV 209 (251)
Q Consensus 138 ~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~----~~----~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 209 (251)
..+.++.++.|+++|++|+++.++...+.+. .. .....++.+|+++.+.+++.+++||+|+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 3456789999999999999998876443221 11 112468999999999999999999999999999999998
Q ss_pred cc-CCCceeecchhhhHHHHHHHHHHHHHhhC
Q 025548 210 SW-SWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 210 ~~-~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
++ .|.+.|+||++|++|+++++.+++.++.+
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 66 68999999999999999999999888644
No 22
>PLN00166 aquaporin TIP2; Provisional
Probab=99.55 E-value=1.4e-14 Score=124.80 Aligned_cols=102 Identities=21% Similarity=0.350 Sum_probs=84.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhccC--CC--CC---CCCc-hHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcc
Q 025548 139 VGAWNAVVFEIVMTFGLVYTVYATALD--PK--KG---SLGT-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVS 210 (251)
Q Consensus 139 ~~~~~~~~~E~~~T~~lv~~v~~~~~~--~~--~~---~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 210 (251)
.+..+.++.|+++|++|+++.++...+ +. ++ ..+. ..++.+|+.+.+.+++++++||+|+||||++++++.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 466789999999999999998886433 11 11 1111 3577899999999999999999999999999999986
Q ss_pred c-CCCceeecchhhhHHHHHHHHHHHHHhhC
Q 025548 211 W-SWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 211 ~-~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
+ .|.+.|+||++|++|+++++.+++.++.+
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5 68899999999999999999999988643
No 23
>PRK05420 aquaporin Z; Provisional
Probab=99.52 E-value=4.3e-14 Score=120.50 Aligned_cols=99 Identities=24% Similarity=0.256 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC--CCC-CCc-hHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-CCCce
Q 025548 142 WNAVVFEIVMTFGLVYTVYATALDPK--KGS-LGT-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-SWDNH 216 (251)
Q Consensus 142 ~~~~~~E~~~T~~lv~~v~~~~~~~~--~~~-~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 216 (251)
.+.++.|+++|++|+++.+......+ .+. .+. ..++.+|+++.+.+++.++.||+|+|||+++++.+.++ +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 47899999999999998776432211 111 112 24789999999999999999999999999999999976 79999
Q ss_pred eecchhhhHHHHHHHHHHHHHhhC
Q 025548 217 WVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 217 wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
|+||++|++|+++|+.+.+.++.+
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999888777644
No 24
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.52 E-value=4e-14 Score=119.74 Aligned_cols=97 Identities=21% Similarity=0.245 Sum_probs=80.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHh
Q 025548 16 HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVG 95 (251)
Q Consensus 16 ~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~ 95 (251)
..+.++.++.|+++|+++++..+...... +. .......++.+|+.+...++..+++||+|+|||+++++++.
T Consensus 118 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~-----~~---~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~ 189 (216)
T TIGR00861 118 GVSSGQAFFVEFIGTAILVLVIFATTDPR-----NR---VPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALF 189 (216)
T ss_pred cccHHHHHHHHHHHHHHHHHHHheeecCC-----CC---CCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHH
Confidence 35789999999999999999987654321 10 01111468899999999999999999999999999999997
Q ss_pred c-CCcchhhHHHHHHHhHhHHHHHHH
Q 025548 96 G-NISLLRGILYWIAQLLGSTVACLL 120 (251)
Q Consensus 96 g-~~~~~~~~~yi~aQ~~Ga~~g~~~ 120 (251)
+ +.+|.+.|+|+++|++|+++++.+
T Consensus 190 ~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 190 AGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred hccccccceeHHHHHHHHHHHHHHHh
Confidence 6 578999999999999999999875
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.51 E-value=3e-14 Score=125.32 Aligned_cols=102 Identities=22% Similarity=0.280 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccCCCC-C-CC-CchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-CCCc
Q 025548 140 GAWNAVVFEIVMTFGLVYTVYATALDPKK-G-SL-GTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-SWDN 215 (251)
Q Consensus 140 ~~~~~~~~E~~~T~~lv~~v~~~~~~~~~-~-~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 215 (251)
+..+.++.|+++|++++++.++...+... + .. ....++.+|+++.+.+++.+++||+|+|||+++++++.++ .|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45689999999999999988775433211 1 11 1235678899999999999999999999999999999988 8999
Q ss_pred eeecchhhhHHHHHHHHHHHHHhhCC
Q 025548 216 HWVYWVGPLIGGGLAGIVYEFFFINQ 241 (251)
Q Consensus 216 ~wvy~~~p~~Ga~la~~~~~~~~~~~ 241 (251)
.|+||++|++|+++|+++.+.+|.++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~~ 153 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYGF 153 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999998887664
No 26
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.2e-14 Score=121.87 Aligned_cols=106 Identities=25% Similarity=0.339 Sum_probs=90.5
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Q 025548 11 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTF 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl 90 (251)
.......+..|.++.|++.||.+|+..++..... +.. ...++.+|+.+.+.++..+++||++||||+|+
T Consensus 123 ~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~-------~~~----~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSf 191 (238)
T KOG0223|consen 123 TGLAPGLSTGQGLVIEIILTFILVFTVFATATDP-------RRS----ELAPLAIGFSVGLNILAAGPFTGASMNPARSF 191 (238)
T ss_pred eccCCCCCcchhHHHHHHHHHHHhheeEEEeecC-------CCc----ccHHHHHHHHHHHHHHeecCcCcCccCcHHHh
Confidence 3445567889999999999999999987643311 111 46789999999999999999999999999999
Q ss_pred HHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCC
Q 025548 91 GAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ 128 (251)
Q Consensus 91 ~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 128 (251)
++++..+ +|..+|+||++|++|+++++++.+.++.++
T Consensus 192 GpAvv~~-~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 192 GPAVVYG-SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred hHHHHhc-CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 9999987 499999999999999999999999998654
No 27
>PLN00027 aquaporin TIP; Provisional
Probab=99.50 E-value=9.8e-14 Score=119.80 Aligned_cols=100 Identities=23% Similarity=0.372 Sum_probs=82.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcc------CCCCCCCCc--hHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc
Q 025548 140 GAWNAVVFEIVMTFGLVYTVYATAL------DPKKGSLGT--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW 211 (251)
Q Consensus 140 ~~~~~~~~E~~~T~~lv~~v~~~~~------~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 211 (251)
...+.++.|+++|++|+++.++... ++++..... ..++.+|+++.+.+++.++.||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4578899999999999998887532 111111112 46899999999999999999999999999999998765
Q ss_pred -CCCceeecchhhhHHHHHHHHHHHHHhh
Q 025548 212 -SWDNHWVYWVGPLIGGGLAGIVYEFFFI 239 (251)
Q Consensus 212 -~~~~~wvy~~~p~~Ga~la~~~~~~~~~ 239 (251)
.|...|+||++|++|+++++.+++.++.
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999999999999999987753
No 28
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.5e-13 Score=116.47 Aligned_cols=107 Identities=21% Similarity=0.242 Sum_probs=87.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccC---CC---CCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-C
Q 025548 140 GAWNAVVFEIVMTFGLVYTVYATALD---PK---KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-S 212 (251)
Q Consensus 140 ~~~~~~~~E~~~T~~lv~~v~~~~~~---~~---~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 212 (251)
+..+.++.|+++|++|++...++... ++ .........+.+|+.|.+.+++.+++||+|+|||.+++.++.++ +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34567899999999999976554321 11 11112236789999999999999999999999999999999977 7
Q ss_pred CCceeecchhhhHHHHHHHHHHHHHhhCCCCCCC
Q 025548 213 WDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQL 246 (251)
Q Consensus 213 ~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~~~ 246 (251)
|++...||++|++|+++++.+...+|.++..+.+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 9999999999999999999999999888776655
No 29
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.40 E-value=3.5e-13 Score=115.95 Aligned_cols=105 Identities=23% Similarity=0.332 Sum_probs=86.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCC--chHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHccc-CCC
Q 025548 140 GAWNAVVFEIVMTFGLVYTVYATALDPKK--GSLG--TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-SWD 214 (251)
Q Consensus 140 ~~~~~~~~E~~~T~~lv~~v~~~~~~~~~--~~~~--~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 214 (251)
...|.+++|+++|++|++..++++....- .+.+ ....+.+|+++...++..+.+||+|+|||++++..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 56789999999999999887665332211 1111 234688999999999999999999999999999999977 899
Q ss_pred ceeecchhhhHHHHHHHHHHHHHhhCCCCC
Q 025548 215 NHWVYWVGPLIGGGLAGIVYEFFFINQSHE 244 (251)
Q Consensus 215 ~~wvy~~~p~~Ga~la~~~~~~~~~~~~~~ 244 (251)
++.+|.++|++||++++.....+|++...+
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~ 139 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDAINE 139 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999888888776543
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.21 E-value=7e-11 Score=100.51 Aligned_cols=100 Identities=25% Similarity=0.335 Sum_probs=79.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcccccccchHHHHHH
Q 025548 13 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSGLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGA 92 (251)
Q Consensus 13 ~~~~~~~~~~~~~Ef~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~ 92 (251)
...+.+..+.++.|+++|+++++.........+ ..+.+. ..++.+|+.+....+..++.||+.+|||+++++
T Consensus 128 ~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~-------~~~~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~ 199 (227)
T PF00230_consen 128 PPPGISLGQAFFSEFIGTFILVLVILAVADDKR-------KFPLGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGP 199 (227)
T ss_dssp STTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS-------SSTSSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHH
T ss_pred ccccchhhhhhhhhhhhhhHHHhhhhhhccccc-------cccccc-ccceeEEEEEeecccccccccccccCchhhcCc
Confidence 345567899999999999999998765543111 111111 347888889988899999999999999999999
Q ss_pred HHhcCCcchhhHHHHHHHhHhHHHHHHHH
Q 025548 93 FVGGNISLLRGILYWIAQLLGSTVACLLL 121 (251)
Q Consensus 93 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 121 (251)
.+.... |...|+||++|++|+++|++++
T Consensus 200 ~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 200 ALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred eeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 998764 9999999999999999998763
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=87.64 E-value=18 Score=31.52 Aligned_cols=177 Identities=17% Similarity=0.290 Sum_probs=86.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhc--C---Cccc
Q 025548 57 GLVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN--G---QTTS 131 (251)
Q Consensus 57 ~~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~---~~~~ 131 (251)
..+..++.+++++...+++-+..--+ |--........++++|.+.+--|.-=.+|=++|+++.-+++. + ..++
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 45566777777777766653332111 333333445678899998887777667777777666655441 1 1111
Q ss_pred cc-----cc---CCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhh
Q 025548 132 AF-----AL---SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVS 203 (251)
Q Consensus 132 ~~-----~~---~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~ 203 (251)
.+ .. .-+.+..+.|.--.++-.+..+++... ...|.. .-.-+.+-+.+...+. ....=...|=..-
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~-~~~k~~---~~K~~~m~~pv~~Fv~--~GfeH~VANm~~i 214 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS-YSAKDG---AAKIFAIILPVMLFVA--SGFEHSVANMFMI 214 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH-hcccch---hhHHHHHHHHHHHHHH--cCCceeeehHHHH
Confidence 11 11 112345566666666666666665543 222221 1122333333333333 2233344553222
Q ss_pred HHHHHccc--CCCc-ee----ecchhhhHHH-HHHHHHHHHHhhCC
Q 025548 204 FGPALVSW--SWDN-HW----VYWVGPLIGG-GLAGIVYEFFFINQ 241 (251)
Q Consensus 204 l~~~~~~~--~~~~-~w----vy~~~p~~Ga-~la~~~~~~~~~~~ 241 (251)
...+...+ +|.+ .| .-.+|.++|+ ++-++.|+++++++
T Consensus 215 ~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~ 260 (265)
T COG2116 215 PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQ 260 (265)
T ss_pred HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccc
Confidence 11222222 4444 22 2336666655 44567777775544
No 32
>PRK10805 formate transporter; Provisional
Probab=84.04 E-value=29 Score=30.58 Aligned_cols=100 Identities=15% Similarity=0.273 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc-cccccchHHHHHHHHhcCCcchhhHHHHH----HHhHhHHHHHHHHHHHhcC-Cccc
Q 025548 58 LVAASVAHAFALFVAVAVGANI-SGGHVNPAVTFGAFVGGNISLLRGILYWI----AQLLGSTVACLLLKFVTNG-QTTS 131 (251)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~~-sGah~NPavtl~~~l~g~~~~~~~~~yi~----aQ~~Ga~~g~~~~~~~~~~-~~~~ 131 (251)
.+..++.+..++...++.-+.. || |--.+++ .+.||.+|.+..-.|. +-++|+++-+.+.+..... ...+
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcc
Confidence 3444566666666655553333 34 5554443 5778889888774444 4455555444443322100 0000
Q ss_pred cc-----c---cCCCCchHHHHHHHHHHHHHHHHHHHh
Q 025548 132 AF-----A---LSSGVGAWNAVVFEIVMTFGLVYTVYA 161 (251)
Q Consensus 132 ~~-----~---~~~~~~~~~~~~~E~~~T~~lv~~v~~ 161 (251)
.. . -.-+.+.++.|+-=.+|-++..+.+..
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 111245667777767777777666654
No 33
>PRK11562 nitrite transporter NirC; Provisional
Probab=82.92 E-value=32 Score=30.11 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-cccccchHHHHHHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhc---C-Ccc--c
Q 025548 59 VAASVAHAFALFVAVAVGANI-SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---G-QTT--S 131 (251)
Q Consensus 59 ~~~~l~~g~~~~~~i~~~~~~-sGah~NPavtl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~---~-~~~--~ 131 (251)
+..++.+++++.+.++.-+.. || |-.......+.|+.+|++.+--|.-=.+|=++|+.+.-.+.. + ... .
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~ 135 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 334556666666655543322 22 433333456778888888776666666666666655544431 1 010 0
Q ss_pred cc-----ccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHH
Q 025548 132 AF-----ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP 206 (251)
Q Consensus 132 ~~-----~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~ 206 (251)
.. .-.-+.+..+.|+-=.+|-++..+.+... ...+. .+.. +.+-+.+.+.+..+. .=...|=- -+..
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~-~~~~~--~gKi--~~i~~pI~~Fv~~GF--EH~IANm~-~~~l 207 (268)
T PRK11562 136 SIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA-IRTEG--AAKF--IAIWWCLLAFIASGY--EHSVANMT-LFAL 207 (268)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH-Hhccc--cchh--HHHHHHHHHHHHcCC--cchhHhHH-HHHH
Confidence 00 01112355666666667777766665543 22221 1112 223333333332222 11223411 1222
Q ss_pred HHccc-----CC----CceeecchhhhHHH-HHHHHHHHHHhhCCCCCCC
Q 025548 207 ALVSW-----SW----DNHWVYWVGPLIGG-GLAGIVYEFFFINQSHEQL 246 (251)
Q Consensus 207 ~~~~~-----~~----~~~wvy~~~p~~Ga-~la~~~~~~~~~~~~~~~~ 246 (251)
.+... .| ++..+=.+|.++|+ ++-++.|++.+.++.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~~~ 257 (268)
T PRK11562 208 SWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVA 257 (268)
T ss_pred HHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCchh
Confidence 22211 11 12223458888988 5667888888776655444
No 34
>PRK09713 focB putative formate transporter; Provisional
Probab=75.85 E-value=56 Score=28.81 Aligned_cols=101 Identities=13% Similarity=0.108 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHhcCCcchhhHHH----HHHHhHhHHHHHHHHHHHhcC-Ccccc
Q 025548 58 LVAASVAHAFALFVAVAVGANISGGHVNPAVTFGAFVGGNISLLRGILY----WIAQLLGSTVACLLLKFVTNG-QTTSA 132 (251)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~~sGah~NPavtl~~~l~g~~~~~~~~~y----i~aQ~~Ga~~g~~~~~~~~~~-~~~~~ 132 (251)
.+..++.+.+++.+.++.-+..-=+ |=. ++.....|+.+|++..-. +++-++|+++-+.+.+..... .+...
T Consensus 67 ~ll~g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~ 143 (282)
T PRK09713 67 HLVGGLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchh
Confidence 3444666666666655553332111 222 222346788888887744 445555555555544322110 00110
Q ss_pred -----c---ccCCCCchHHHHHHHHHHHHHHHHHHHh
Q 025548 133 -----F---ALSSGVGAWNAVVFEIVMTFGLVYTVYA 161 (251)
Q Consensus 133 -----~---~~~~~~~~~~~~~~E~~~T~~lv~~v~~ 161 (251)
. .-.-+.+.++.|+--.+|-++..+.+..
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~ 180 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM 180 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0112346777777777888877777664
No 35
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=41.91 E-value=3.4e+02 Score=26.40 Aligned_cols=122 Identities=23% Similarity=0.218 Sum_probs=66.4
Q ss_pred chHHHHHHHHhcCCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhcc
Q 025548 85 NPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL 164 (251)
Q Consensus 85 NPavtl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~ 164 (251)
-.+|..+.+-....+.+....++.+.++|+.+|....+.+++.. +.. ..+.=++.-+++... +.. .
T Consensus 371 ~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~-----------~~f-~~L~l~l~~~l~~~~-~~~-~ 436 (650)
T PF04632_consen 371 MAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHL-----------DGF-PLLALVLAPFLFLGG-LLM-A 436 (650)
T ss_pred HHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----------CcH-HHHHHHHHHHHHHHH-HHH-c
Confidence 33444433444456788899999999999999999988887521 111 111111111122211 111 2
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhC
Q 025548 165 DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 (251)
Q Consensus 165 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~ 240 (251)
+++ ......++.+....... .......|++.-+- =.++.++|.+++.+.++.+...
T Consensus 437 ~p~------~~~~g~~~~v~f~~~~~-~~n~~~~d~~~f~n-------------~~la~l~G~~~a~l~~~li~p~ 492 (650)
T PF04632_consen 437 RPR------TAYIGLGFAVFFLLLLG-PGNPYSYDFATFLN-------------RALAILLGIVIAALVFRLIRPF 492 (650)
T ss_pred Cch------HHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHH-------------HHHHHHHHHHHHHHHHHHHCCC
Confidence 222 34455555554444433 22334455544332 2357888999999998888544
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=40.12 E-value=11 Score=28.48 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=16.5
Q ss_pred ccccccchHHHHHHHHhcC
Q 025548 79 ISGGHVNPAVTFGAFVGGN 97 (251)
Q Consensus 79 ~sGah~NPavtl~~~l~g~ 97 (251)
=|+||+||.+.++-.+.++
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 3689999999999999764
No 37
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=27.80 E-value=98 Score=19.23 Aligned_cols=24 Identities=13% Similarity=-0.053 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCCC
Q 025548 224 LIGGGLAGIVYEFFFINQSHEQLP 247 (251)
Q Consensus 224 ~~Ga~la~~~~~~~~~~~~~~~~~ 247 (251)
+.++++++++.+...-|...+++|
T Consensus 20 ~~~~~~~~~~Hyi~vGPn~v~ee~ 43 (44)
T PF09163_consen 20 MGATAAAGFFHYITVGPNRVEEED 43 (44)
T ss_dssp HHHHHHHHHHHHHHH--B-S-SST
T ss_pred HHHHHHHHHHHHhhcCCCCCCcCC
Confidence 444555555555555555544443
No 38
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=27.66 E-value=1.3e+02 Score=27.07 Aligned_cols=48 Identities=29% Similarity=0.622 Sum_probs=35.2
Q ss_pred CCccchhhhHHHHHcc--------cCCCceee-cchhhhHHHHHHHHHHHHHhhCCC
Q 025548 195 GASMNPAVSFGPALVS--------WSWDNHWV-YWVGPLIGGGLAGIVYEFFFINQS 242 (251)
Q Consensus 195 G~~lNPA~~l~~~~~~--------~~~~~~wv-y~~~p~~Ga~la~~~~~~~~~~~~ 242 (251)
+-.+.|-..|.+.... .++++||. -+.|-++|+++|.+.+++++....
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 4556777776665542 27788886 568889999999999998865544
No 39
>PRK11427 multidrug efflux system protein MdtO; Provisional
Probab=27.50 E-value=6.4e+02 Score=25.30 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=22.8
Q ss_pred cchhhHHHHHHHhHhHHHHHHHHHHHhc
Q 025548 99 SLLRGILYWIAQLLGSTVACLLLKFVTN 126 (251)
Q Consensus 99 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 126 (251)
+..|....+.+.++|+++|..+..++.+
T Consensus 394 T~sRa~~RiiGTliGallA~ll~v~l~P 421 (683)
T PRK11427 394 SYQKMVLRFGGAFCGAILALLFTLLVMP 421 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4668888899999999998888876653
No 40
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=26.12 E-value=16 Score=32.98 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=17.6
Q ss_pred HhcccccccchHHHHHHHHhc
Q 025548 76 GANISGGHVNPAVTFGAFVGG 96 (251)
Q Consensus 76 ~~~~sGah~NPavtl~~~l~g 96 (251)
.+.=||||+.||+.++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 455679999999999988874
No 41
>TIGR00851 mtlA PTS system, mannitol-specific IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several putative PTS permeases of unknown specificities.The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This family is specific for the IIC domain of the mannitol PTS transporters.
Probab=25.19 E-value=4.1e+02 Score=23.98 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=16.5
Q ss_pred ceeecchhhhHHHHHHHHHHHHHhh
Q 025548 215 NHWVYWVGPLIGGGLAGIVYEFFFI 239 (251)
Q Consensus 215 ~~wvy~~~p~~Ga~la~~~~~~~~~ 239 (251)
+.+.|.++=.++..++..+...+..
T Consensus 304 ~~~~~li~~~ia~vv~fvlt~~~~~ 328 (338)
T TIGR00851 304 EYLGVLAGVLVAAAVSFVVSAIILK 328 (338)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778777777777666655533
No 42
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=22.45 E-value=5.6e+02 Score=22.81 Aligned_cols=46 Identities=26% Similarity=0.456 Sum_probs=30.6
Q ss_pred CCccch---hhhHHHHHcccCCCceeecchhhhHHHHHHHHHHHHHhhCCC
Q 025548 195 GASMNP---AVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 242 (251)
Q Consensus 195 G~~lNP---A~~l~~~~~~~~~~~~wvy~~~p~~Ga~la~~~~~~~~~~~~ 242 (251)
+-++|| +|++..+++++.| .|++|+|-..=+++...+.++-+.++.
T Consensus 224 l~~~G~~a~~~a~~~al~gg~~--a~~fwiGV~giGliiplll~~~~~~k~ 272 (305)
T COG3301 224 LLSLGGVAAARALATALAGGFW--AWVFWIGVLGLGLIIPLLLKFGVNPKV 272 (305)
T ss_pred HHHhCcHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 345555 5778888888888 688888765545666666665555443
No 43
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=22.13 E-value=5.4e+02 Score=22.59 Aligned_cols=58 Identities=9% Similarity=-0.099 Sum_probs=39.8
Q ss_pred CCcchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHH
Q 025548 97 NISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFG 154 (251)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 154 (251)
+.+|.+.+-+++-|-+=+-+|+.+.+...++++.+......+....++.+.|...|++
T Consensus 96 ~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~~~~~~~~~~~~~~l~dl~~~~~ 153 (271)
T TIGR02587 96 ETSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNNSLSEGKQNSEYGYLAELFAMLV 153 (271)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCccccchhhhcchhhhHHHHHHHHH
Confidence 3479999999999999999999999999975543321111123445556666666654
No 44
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=20.01 E-value=4.2e+02 Score=20.44 Aligned_cols=118 Identities=16% Similarity=0.123 Sum_probs=59.8
Q ss_pred cchhhHHHHHHHhHhHHHHHHHHHHHhcCCcccccccCCCCchHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchHHHH
Q 025548 99 SLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA 178 (251)
Q Consensus 99 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~v~~~~~~~~~~~~~~~~~~~ 178 (251)
.|.+.+.++ .+|+.+|+.+-|.+..... .. ..++. .+..+..-.+++|++-+..-.. .+ +...+ .++.
T Consensus 5 ~~~~~~l~V---~~GG~~Ga~lRy~l~~~~~-~~--~~~~f-P~gTl~VNv~GsfllG~l~~~~-~~-~~~~~---~~~~ 72 (133)
T PRK14218 5 VWWQSLLLV---MLGGAFGSGLRFVIGSCLL-QR--FGAGF-PWGTLAVNLIGSFVAGFLLIWL-DK-RGSAG---WPWR 72 (133)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHH-Hh--cCCCC-cHHHHHHHHHHHHHHHHHHHHH-Hh-ccCCC---HHHH
Confidence 355555444 3888898887776642110 00 11122 3457889999999986654322 12 11111 1122
Q ss_pred HHHHHHHHHHHhcCCCCCccchhhhHHHHHc----ccCCCceeecchhhhHHHHHHHHHHHHH
Q 025548 179 IGFIVGANILAGGAFDGASMNPAVSFGPALV----SWSWDNHWVYWVGPLIGGGLAGIVYEFF 237 (251)
Q Consensus 179 ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~wvy~~~p~~Ga~la~~~~~~~ 237 (251)
..+.+. + .+..|-- -+++.... +++|.....|++..++++++++.+=..+
T Consensus 73 ~~l~tG---f-lGgfTTF-----STf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 126 (133)
T PRK14218 73 MLLIVG---L-IGGLTTF-----SSLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGARL 126 (133)
T ss_pred HHHHHH---H-hchhccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211 1 1222210 12222222 3456566689999999999988765444
Done!