Query 025550
Match_columns 251
No_of_seqs 213 out of 1489
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 06:59:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025550.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025550hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02230 Abhydrolase_2: Phosph 100.0 6.3E-32 1.4E-36 201.2 16.0 208 34-246 9-216 (216)
2 PRK11460 putative hydrolase; P 100.0 2.6E-28 5.5E-33 183.2 19.9 200 34-248 11-211 (232)
3 KOG2112 Lysophospholipase [Lip 100.0 1.4E-26 3.1E-31 163.0 17.2 202 38-244 2-203 (206)
4 COG0400 Predicted esterase [Ge 99.9 4.5E-26 9.8E-31 165.0 18.3 193 34-246 13-206 (207)
5 PRK10566 esterase; Provisional 99.9 6.2E-25 1.3E-29 167.6 17.2 195 36-246 24-249 (249)
6 PHA02857 monoglyceride lipase; 99.9 1.7E-24 3.7E-29 167.7 17.7 201 12-245 5-273 (276)
7 KOG1455 Lysophospholipase [Lip 99.9 1.7E-24 3.6E-29 160.7 15.7 186 36-245 51-312 (313)
8 COG1506 DAP2 Dipeptidyl aminop 99.9 3E-24 6.6E-29 182.0 19.1 216 11-248 369-619 (620)
9 PLN02385 hydrolase; alpha/beta 99.9 3.1E-24 6.7E-29 171.3 17.5 206 12-247 66-347 (349)
10 PLN02298 hydrolase, alpha/beta 99.9 4.2E-23 9.2E-28 163.8 19.6 206 15-249 40-321 (330)
11 PF00326 Peptidase_S9: Prolyl 99.9 9.2E-24 2E-28 157.3 13.8 176 55-248 3-212 (213)
12 PRK10749 lysophospholipase L2; 99.9 5.5E-23 1.2E-27 162.8 18.7 189 38-244 53-328 (330)
13 TIGR02821 fghA_ester_D S-formy 99.9 2.2E-21 4.8E-26 149.7 22.1 204 37-246 40-275 (275)
14 PRK13604 luxD acyl transferase 99.9 1.1E-22 2.4E-27 154.9 14.5 186 14-232 16-247 (307)
15 PF01738 DLH: Dienelactone hyd 99.9 2.2E-22 4.8E-27 150.4 13.3 193 37-246 12-218 (218)
16 PRK00870 haloalkane dehalogena 99.9 1.6E-21 3.4E-26 153.0 17.7 183 38-248 45-300 (302)
17 TIGR03611 RutD pyrimidine util 99.9 6.9E-22 1.5E-26 151.2 14.9 179 37-247 11-256 (257)
18 PLN02442 S-formylglutathione h 99.9 1.1E-20 2.3E-25 146.2 20.4 207 36-247 44-282 (283)
19 PLN02965 Probable pheophorbida 99.9 1.5E-21 3.3E-26 149.4 15.2 178 40-247 4-251 (255)
20 COG2267 PldB Lysophospholipase 99.9 6E-21 1.3E-25 147.8 18.4 202 14-247 16-296 (298)
21 PRK10162 acetyl esterase; Prov 99.9 2.3E-20 4.9E-25 146.7 20.7 182 38-247 80-317 (318)
22 PF12695 Abhydrolase_5: Alpha/ 99.9 6.7E-22 1.4E-26 138.4 10.6 145 41-229 1-145 (145)
23 TIGR02240 PHA_depoly_arom poly 99.9 4.6E-21 1E-25 148.4 16.2 176 38-247 24-264 (276)
24 PLN02824 hydrolase, alpha/beta 99.9 7.9E-21 1.7E-25 148.5 16.9 183 39-247 29-292 (294)
25 PRK05077 frsA fermentation/res 99.9 2.5E-20 5.5E-25 150.8 19.5 197 15-246 176-413 (414)
26 PLN02652 hydrolase; alpha/beta 99.9 1.9E-20 4.1E-25 150.4 18.1 186 36-247 133-389 (395)
27 COG1647 Esterase/lipase [Gener 99.9 3.6E-21 7.8E-26 136.4 11.4 176 39-243 15-242 (243)
28 COG0412 Dienelactone hydrolase 99.9 1E-19 2.2E-24 136.1 19.8 211 15-247 9-235 (236)
29 PRK10673 acyl-CoA esterase; Pr 99.9 1.3E-20 2.8E-25 144.3 15.1 177 37-247 14-253 (255)
30 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.3E-20 4.9E-25 145.1 16.2 178 39-247 30-281 (282)
31 TIGR03056 bchO_mg_che_rel puta 99.9 2.8E-20 6.1E-25 144.1 15.5 177 38-246 27-277 (278)
32 PF12697 Abhydrolase_6: Alpha/ 99.9 1.5E-20 3.2E-25 140.8 13.1 169 42-241 1-228 (228)
33 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.8E-20 3.8E-25 142.6 13.5 176 38-246 12-250 (251)
34 TIGR01840 esterase_phb esteras 99.9 1.9E-20 4.1E-25 139.2 13.2 163 36-214 10-197 (212)
35 PLN02679 hydrolase, alpha/beta 99.8 6.8E-20 1.5E-24 146.7 16.8 182 39-248 88-356 (360)
36 PRK10349 carboxylesterase BioH 99.8 4.9E-20 1.1E-24 141.2 14.1 170 39-246 13-253 (256)
37 TIGR03695 menH_SHCHC 2-succiny 99.8 1.2E-19 2.7E-24 137.8 16.3 175 40-246 2-250 (251)
38 TIGR01738 bioH putative pimelo 99.8 3.7E-20 8E-25 140.4 13.4 169 39-245 4-244 (245)
39 KOG4409 Predicted hydrolase/ac 99.8 2.7E-19 5.9E-24 135.6 16.3 184 35-247 86-362 (365)
40 PRK03592 haloalkane dehalogena 99.8 1.4E-19 3E-24 141.5 14.9 176 39-246 27-286 (295)
41 PRK11126 2-succinyl-6-hydroxy- 99.8 3.2E-19 6.9E-24 135.6 16.4 168 39-247 2-240 (242)
42 PRK10115 protease 2; Provision 99.8 5.2E-19 1.1E-23 151.2 19.1 215 12-247 421-677 (686)
43 PLN02211 methyl indole-3-aceta 99.8 4.5E-19 9.8E-24 136.6 15.7 181 36-247 15-268 (273)
44 PRK14875 acetoin dehydrogenase 99.8 5.4E-19 1.2E-23 142.6 16.6 176 37-248 129-370 (371)
45 KOG1552 Predicted alpha/beta h 99.8 8.4E-19 1.8E-23 128.0 15.8 181 37-248 58-255 (258)
46 PLN03087 BODYGUARD 1 domain co 99.8 3.8E-19 8.1E-24 145.0 15.4 181 38-249 200-479 (481)
47 PRK03204 haloalkane dehalogena 99.8 6.4E-19 1.4E-23 137.0 15.6 177 39-247 34-286 (286)
48 TIGR01607 PST-A Plasmodium sub 99.8 1E-18 2.3E-23 138.2 16.9 200 15-243 5-331 (332)
49 KOG1454 Predicted hydrolase/ac 99.8 2.4E-18 5.3E-23 134.6 17.5 183 36-248 55-323 (326)
50 PLN02578 hydrolase 99.8 1E-18 2.2E-23 139.7 15.1 174 40-247 87-353 (354)
51 KOG4178 Soluble epoxide hydrol 99.8 1.3E-18 2.7E-23 131.5 14.5 184 35-247 40-318 (322)
52 PF05448 AXE1: Acetyl xylan es 99.8 4.1E-18 8.9E-23 132.8 17.1 216 15-245 64-320 (320)
53 PLN03084 alpha/beta hydrolase 99.8 2.5E-18 5.4E-23 137.5 16.1 180 38-247 126-382 (383)
54 TIGR01250 pro_imino_pep_2 prol 99.8 3.1E-18 6.6E-23 133.0 16.2 179 38-246 24-287 (288)
55 PRK11071 esterase YqiA; Provis 99.8 2.8E-18 6.1E-23 124.8 13.6 155 40-243 2-189 (190)
56 COG4099 Predicted peptidase [G 99.8 7.6E-18 1.6E-22 124.5 15.8 199 22-244 175-384 (387)
57 PLN02894 hydrolase, alpha/beta 99.8 8.8E-18 1.9E-22 136.0 17.1 107 37-168 103-210 (402)
58 COG0657 Aes Esterase/lipase [L 99.8 1E-17 2.2E-22 131.8 16.5 168 35-230 75-288 (312)
59 TIGR03100 hydr1_PEP hydrolase, 99.8 5.3E-17 1.1E-21 125.3 19.7 198 14-246 8-272 (274)
60 TIGR01249 pro_imino_pep_1 prol 99.8 1.9E-17 4.1E-22 130.0 17.5 177 39-246 27-306 (306)
61 PLN02511 hydrolase 99.8 2.2E-17 4.9E-22 133.2 17.9 185 37-248 98-368 (388)
62 PRK06489 hypothetical protein; 99.8 1.7E-17 3.6E-22 133.2 15.5 184 39-247 69-355 (360)
63 TIGR01392 homoserO_Ac_trn homo 99.8 4.7E-17 1E-21 130.1 17.1 194 38-247 30-351 (351)
64 PRK10985 putative hydrolase; P 99.8 5.8E-17 1.3E-21 128.1 17.2 183 37-247 56-322 (324)
65 PRK08775 homoserine O-acetyltr 99.8 1.7E-17 3.7E-22 132.3 14.2 177 39-248 58-338 (343)
66 PF07859 Abhydrolase_3: alpha/ 99.8 3.3E-18 7.2E-23 127.3 9.3 162 42-231 1-210 (211)
67 KOG2100 Dipeptidyl aminopeptid 99.8 6.7E-17 1.5E-21 138.9 18.3 223 5-248 495-750 (755)
68 KOG4391 Predicted alpha/beta h 99.8 8.3E-18 1.8E-22 118.9 10.2 205 8-248 55-285 (300)
69 PRK07581 hypothetical protein; 99.8 3.2E-17 6.9E-22 130.7 14.7 114 38-167 40-157 (339)
70 KOG4667 Predicted esterase [Li 99.8 3.6E-17 7.8E-22 115.6 12.7 167 37-233 31-243 (269)
71 PRK00175 metX homoserine O-ace 99.7 1.1E-16 2.4E-21 129.0 17.2 195 38-247 47-372 (379)
72 PF10503 Esterase_phd: Esteras 99.7 4E-17 8.7E-22 119.8 13.1 160 37-214 14-198 (220)
73 PF06500 DUF1100: Alpha/beta h 99.7 2.1E-16 4.6E-21 124.4 15.7 204 8-246 165-410 (411)
74 PLN02980 2-oxoglutarate decarb 99.7 1.3E-16 2.9E-21 147.7 16.5 188 38-247 1370-1637(1655)
75 KOG1515 Arylacetamide deacetyl 99.7 8.8E-16 1.9E-20 119.3 18.4 181 37-244 88-334 (336)
76 PLN00021 chlorophyllase 99.7 3.2E-16 7E-21 122.1 15.9 172 35-229 48-240 (313)
77 COG3458 Acetyl esterase (deace 99.7 2.7E-16 5.9E-21 115.1 13.0 217 15-246 64-318 (321)
78 KOG2551 Phospholipase/carboxyh 99.7 3.5E-16 7.5E-21 111.5 12.2 190 37-247 3-222 (230)
79 TIGR03101 hydr2_PEP hydrolase, 99.7 6E-15 1.3E-19 112.1 19.4 180 37-243 23-259 (266)
80 KOG3043 Predicted hydrolase re 99.7 2.8E-16 6.1E-21 111.9 11.2 184 40-246 40-241 (242)
81 PF03959 FSH1: Serine hydrolas 99.7 5.7E-17 1.2E-21 120.1 8.0 176 38-232 3-204 (212)
82 COG3208 GrsT Predicted thioest 99.7 1.1E-15 2.5E-20 111.0 13.4 180 36-247 4-234 (244)
83 TIGR01836 PHA_synth_III_C poly 99.7 2.1E-15 4.6E-20 120.5 15.8 177 39-244 62-349 (350)
84 PLN02872 triacylglycerol lipas 99.7 1.8E-15 3.8E-20 121.5 15.1 140 8-167 45-195 (395)
85 COG2945 Predicted hydrolase of 99.7 1.9E-15 4E-20 105.3 13.0 174 35-243 24-205 (210)
86 PRK05855 short chain dehydroge 99.7 1.6E-15 3.4E-20 129.5 15.5 178 38-246 24-289 (582)
87 PRK06765 homoserine O-acetyltr 99.7 1.3E-14 2.8E-19 116.5 18.3 199 35-249 52-388 (389)
88 KOG2281 Dipeptidyl aminopeptid 99.7 3.6E-15 7.8E-20 120.9 14.6 209 15-244 621-866 (867)
89 PF06821 Ser_hydrolase: Serine 99.6 1E-14 2.3E-19 103.6 12.9 157 42-243 1-170 (171)
90 PRK10439 enterobactin/ferric e 99.6 6E-14 1.3E-18 113.3 18.9 188 36-243 206-407 (411)
91 PF03403 PAF-AH_p_II: Platelet 99.6 6.1E-15 1.3E-19 117.7 10.3 185 37-229 98-315 (379)
92 PF05728 UPF0227: Uncharacteri 99.6 9.2E-14 2E-18 99.8 15.0 154 42-242 2-186 (187)
93 COG3509 LpqC Poly(3-hydroxybut 99.6 1.4E-13 3.1E-18 102.5 15.6 118 37-170 59-180 (312)
94 PF08840 BAAT_C: BAAT / Acyl-C 99.6 6.5E-14 1.4E-18 103.6 11.0 119 128-247 16-212 (213)
95 KOG2382 Predicted alpha/beta h 99.5 3.3E-13 7.2E-18 102.5 14.6 184 35-247 48-311 (315)
96 COG0429 Predicted hydrolase of 99.5 7.3E-13 1.6E-17 100.5 14.8 188 34-248 70-343 (345)
97 KOG2984 Predicted hydrolase [G 99.5 1.4E-13 2.9E-18 96.8 10.0 183 38-249 41-276 (277)
98 PF12740 Chlorophyllase2: Chlo 99.5 4.6E-13 1E-17 99.7 13.1 172 35-229 13-205 (259)
99 TIGR00976 /NonD putative hydro 99.5 1.3E-12 2.8E-17 110.4 16.5 124 15-168 4-131 (550)
100 KOG2564 Predicted acetyltransf 99.5 6.5E-13 1.4E-17 98.0 12.3 105 36-165 71-178 (343)
101 PRK07868 acyl-CoA synthetase; 99.5 2E-12 4.2E-17 116.3 17.6 180 38-247 66-363 (994)
102 PF06342 DUF1057: Alpha/beta h 99.5 3.1E-12 6.7E-17 95.2 15.6 107 34-168 30-136 (297)
103 TIGR01838 PHA_synth_I poly(R)- 99.5 1.4E-12 3.1E-17 107.9 14.6 108 37-170 186-303 (532)
104 KOG3847 Phospholipase A2 (plat 99.5 1E-12 2.2E-17 98.3 11.7 188 34-229 113-328 (399)
105 PF00561 Abhydrolase_1: alpha/ 99.5 3.8E-13 8.3E-18 101.1 9.8 148 67-242 1-228 (230)
106 PRK05371 x-prolyl-dipeptidyl a 99.5 2E-12 4.3E-17 112.0 15.2 173 58-248 271-522 (767)
107 PF00756 Esterase: Putative es 99.5 1.2E-13 2.6E-18 105.5 7.0 125 115-242 98-251 (251)
108 COG3571 Predicted hydrolase of 99.4 2.2E-11 4.8E-16 82.5 15.6 170 34-231 9-183 (213)
109 cd00707 Pancreat_lipase_like P 99.4 1.3E-12 2.7E-17 100.6 11.0 114 36-172 33-150 (275)
110 PF08538 DUF1749: Protein of u 99.4 3.8E-12 8.2E-17 96.7 12.6 182 38-245 32-297 (303)
111 COG1505 Serine proteases of th 99.4 2.8E-12 6.1E-17 104.0 11.1 214 9-246 396-647 (648)
112 KOG4627 Kynurenine formamidase 99.4 3.2E-12 6.9E-17 90.2 9.7 178 36-246 64-268 (270)
113 TIGR03230 lipo_lipase lipoprot 99.4 1.5E-11 3.2E-16 99.2 14.8 114 36-172 38-157 (442)
114 PF12715 Abhydrolase_7: Abhydr 99.4 7.9E-13 1.7E-17 102.9 7.2 170 36-225 112-343 (390)
115 PF03583 LIP: Secretory lipase 99.4 7.8E-12 1.7E-16 96.8 12.6 67 184-250 218-286 (290)
116 PF02129 Peptidase_S15: X-Pro 99.4 2E-11 4.3E-16 94.3 13.9 170 34-229 15-271 (272)
117 KOG1838 Alpha/beta hydrolase [ 99.4 2E-10 4.4E-15 90.4 19.1 184 36-246 122-389 (409)
118 COG0627 Predicted esterase [Ge 99.4 7E-11 1.5E-15 91.6 15.4 208 36-248 51-314 (316)
119 PRK04940 hypothetical protein; 99.3 1.8E-10 3.8E-15 81.3 15.6 119 115-243 42-178 (180)
120 PF06028 DUF915: Alpha/beta hy 99.3 6.5E-11 1.4E-15 89.2 13.1 196 38-242 10-252 (255)
121 COG2382 Fes Enterochelin ester 99.3 8.6E-11 1.9E-15 88.4 13.0 176 35-231 94-282 (299)
122 COG3545 Predicted esterase of 99.3 1.6E-10 3.6E-15 79.9 12.7 112 108-230 39-157 (181)
123 PF00975 Thioesterase: Thioest 99.3 1.6E-10 3.6E-15 87.0 13.7 177 40-246 1-229 (229)
124 KOG3101 Esterase D [General fu 99.3 5E-11 1.1E-15 84.6 9.8 193 34-231 39-263 (283)
125 COG4188 Predicted dienelactone 99.3 6.9E-11 1.5E-15 91.5 11.0 178 37-231 69-296 (365)
126 TIGR01839 PHA_synth_II poly(R) 99.3 1.2E-10 2.6E-15 95.9 12.8 163 36-229 212-481 (560)
127 COG2819 Predicted hydrolase of 99.3 3.3E-09 7.1E-14 79.0 19.2 127 115-243 120-259 (264)
128 COG0596 MhpC Predicted hydrola 99.2 5.6E-10 1.2E-14 85.1 15.0 173 39-244 21-277 (282)
129 PF07224 Chlorophyllase: Chlor 99.2 3E-10 6.5E-15 83.5 11.2 172 34-229 41-230 (307)
130 KOG2237 Predicted serine prote 99.2 7.6E-10 1.6E-14 90.7 14.0 194 36-247 467-707 (712)
131 PF02273 Acyl_transf_2: Acyl t 99.2 1.7E-09 3.7E-14 78.8 12.8 185 15-231 10-239 (294)
132 COG2021 MET2 Homoserine acetyl 99.1 4E-09 8.7E-14 81.8 15.3 116 35-167 47-180 (368)
133 PF09752 DUF2048: Uncharacteri 99.1 1.9E-09 4.1E-14 83.4 13.1 170 37-229 90-328 (348)
134 COG1770 PtrB Protease II [Amin 99.1 7.4E-09 1.6E-13 85.5 17.2 194 35-246 444-679 (682)
135 PF06057 VirJ: Bacterial virul 99.1 2.1E-09 4.5E-14 76.1 12.2 167 40-247 3-190 (192)
136 TIGR03502 lipase_Pla1_cef extr 99.1 6.2E-10 1.3E-14 95.5 10.1 111 38-154 448-575 (792)
137 PF10230 DUF2305: Uncharacteri 99.1 7.6E-09 1.7E-13 79.3 14.2 114 39-169 2-122 (266)
138 TIGR01849 PHB_depoly_PhaZ poly 99.0 2.4E-08 5.2E-13 80.0 16.4 175 40-244 103-405 (406)
139 PF07819 PGAP1: PGAP1-like pro 99.0 7.3E-09 1.6E-13 77.3 10.3 110 38-169 3-123 (225)
140 KOG2624 Triglyceride lipase-ch 99.0 2.1E-08 4.5E-13 80.2 13.2 119 37-169 71-199 (403)
141 cd00312 Esterase_lipase Estera 99.0 3.5E-09 7.6E-14 88.9 9.4 116 36-169 92-213 (493)
142 COG3150 Predicted esterase [Ge 98.9 4E-08 8.6E-13 67.4 12.0 155 42-242 2-186 (191)
143 COG2272 PnbA Carboxylesterase 98.9 1.1E-08 2.4E-13 82.1 9.8 120 35-170 90-218 (491)
144 PF10340 DUF2424: Protein of u 98.9 1.4E-07 2.9E-12 74.4 15.2 174 38-242 121-363 (374)
145 PF11339 DUF3141: Protein of u 98.9 4.1E-07 9E-12 73.6 17.8 56 112-167 118-173 (581)
146 PF00151 Lipase: Lipase; Inte 98.9 1.1E-08 2.4E-13 80.5 8.5 138 36-197 68-216 (331)
147 COG4757 Predicted alpha/beta h 98.9 2E-08 4.4E-13 72.6 8.9 178 41-242 32-280 (281)
148 PF12048 DUF3530: Protein of u 98.8 1.9E-06 4E-11 67.6 19.8 206 35-244 83-308 (310)
149 PF12146 Hydrolase_4: Putative 98.8 8.7E-09 1.9E-13 63.3 5.3 45 37-81 14-58 (79)
150 PF05990 DUF900: Alpha/beta hy 98.8 1.1E-07 2.4E-12 71.4 12.1 144 36-202 15-170 (233)
151 COG4814 Uncharacterized protei 98.8 1.9E-07 4.2E-12 68.6 12.0 193 41-243 47-285 (288)
152 KOG3253 Predicted alpha/beta h 98.8 9.5E-08 2.1E-12 78.2 11.0 117 111-231 224-347 (784)
153 PRK10252 entF enterobactin syn 98.8 2.7E-07 5.9E-12 86.3 15.6 174 39-247 1068-1295(1296)
154 PF03096 Ndr: Ndr family; Int 98.7 1.5E-06 3.3E-11 66.0 14.7 183 37-247 21-277 (283)
155 PF00135 COesterase: Carboxyle 98.7 3.6E-08 7.8E-13 83.7 6.8 115 38-168 124-244 (535)
156 COG3243 PhaC Poly(3-hydroxyalk 98.7 5.9E-07 1.3E-11 71.0 11.9 106 38-170 106-218 (445)
157 KOG3975 Uncharacterized conser 98.6 3.2E-06 7E-11 62.1 14.1 183 35-237 25-291 (301)
158 PF05677 DUF818: Chlamydia CHL 98.6 1.5E-05 3.2E-10 61.7 17.8 205 10-246 114-364 (365)
159 PF01674 Lipase_2: Lipase (cla 98.6 2.3E-07 5E-12 68.5 7.1 89 41-154 3-95 (219)
160 KOG1553 Predicted alpha/beta h 98.5 4.8E-07 1E-11 69.5 8.2 158 11-201 218-399 (517)
161 COG4782 Uncharacterized protei 98.5 2.5E-06 5.5E-11 66.2 11.7 186 37-247 114-328 (377)
162 KOG2931 Differentiation-relate 98.5 1.3E-05 2.9E-10 60.4 14.6 180 38-246 45-303 (326)
163 PF10142 PhoPQ_related: PhoPQ- 98.5 5.6E-06 1.2E-10 65.7 12.8 134 110-249 150-324 (367)
164 PF05705 DUF829: Eukaryotic pr 98.5 3E-06 6.6E-11 64.3 10.9 163 40-231 1-224 (240)
165 PF05057 DUF676: Putative seri 98.5 4.6E-07 1E-11 67.5 6.2 93 37-153 2-97 (217)
166 COG3319 Thioesterase domains o 98.4 2E-06 4.3E-11 65.0 8.9 101 40-170 1-104 (257)
167 COG4947 Uncharacterized protei 98.4 6.7E-07 1.5E-11 61.7 5.1 95 134-230 101-216 (227)
168 KOG4840 Predicted hydrolases o 98.4 1.1E-05 2.4E-10 58.4 11.2 107 36-169 33-144 (299)
169 PF11144 DUF2920: Protein of u 98.3 2E-05 4.2E-10 62.7 12.9 115 109-223 157-331 (403)
170 PF07082 DUF1350: Protein of u 98.3 0.0001 2.2E-09 54.8 14.5 177 38-246 16-233 (250)
171 COG1073 Hydrolases of the alph 98.3 6.6E-06 1.4E-10 64.2 8.7 59 186-246 233-298 (299)
172 PLN02733 phosphatidylcholine-s 98.2 6.1E-06 1.3E-10 67.5 8.1 92 51-169 106-201 (440)
173 smart00824 PKS_TE Thioesterase 98.2 6.7E-05 1.5E-09 55.3 13.0 165 44-242 2-208 (212)
174 cd00741 Lipase Lipase. Lipase 98.2 1.7E-05 3.7E-10 55.7 8.5 70 132-201 26-99 (153)
175 COG1075 LipA Predicted acetylt 98.1 1.5E-05 3.2E-10 63.5 7.7 100 38-167 58-162 (336)
176 KOG1516 Carboxylesterase and r 98.1 2.7E-05 5.9E-10 66.4 9.5 112 39-167 112-230 (545)
177 COG3946 VirJ Type IV secretory 98.0 0.00028 6E-09 55.9 13.4 157 39-234 260-435 (456)
178 COG2936 Predicted acyl esteras 98.0 7.9E-05 1.7E-09 62.1 10.0 128 13-170 25-160 (563)
179 KOG2565 Predicted hydrolases o 97.8 0.00016 3.6E-09 56.5 8.8 100 35-162 148-257 (469)
180 KOG4388 Hormone-sensitive lipa 97.8 6.6E-05 1.4E-09 61.9 6.9 108 34-167 391-506 (880)
181 PF07519 Tannase: Tannase and 97.8 0.00032 6.9E-09 58.4 11.0 64 184-247 352-429 (474)
182 PF02450 LCAT: Lecithin:choles 97.8 0.00014 2.9E-09 59.3 8.3 58 111-170 98-161 (389)
183 PTZ00472 serine carboxypeptida 97.7 0.00055 1.2E-08 57.0 10.5 65 185-249 364-459 (462)
184 PF05577 Peptidase_S28: Serine 97.6 0.00053 1.2E-08 56.9 9.9 116 39-170 29-149 (434)
185 TIGR03712 acc_sec_asp2 accesso 97.6 0.0034 7.4E-08 51.3 13.3 177 34-245 284-499 (511)
186 PLN02606 palmitoyl-protein thi 97.5 0.0013 2.8E-08 50.7 9.8 99 40-167 27-130 (306)
187 KOG3724 Negative regulator of 97.5 0.00049 1.1E-08 59.0 8.0 44 110-153 150-201 (973)
188 PF06259 Abhydrolase_8: Alpha/ 97.4 0.0069 1.5E-07 43.4 11.2 89 108-200 83-172 (177)
189 KOG2521 Uncharacterized conser 97.4 0.011 2.5E-07 46.8 13.3 186 37-247 37-292 (350)
190 KOG3967 Uncharacterized conser 97.4 0.0027 5.8E-08 46.1 8.9 27 132-158 188-214 (297)
191 PF01764 Lipase_3: Lipase (cla 97.3 0.002 4.3E-08 44.4 7.9 79 118-198 49-133 (140)
192 PLN02633 palmitoyl protein thi 97.3 0.0045 9.7E-08 47.9 9.8 33 135-167 95-129 (314)
193 COG4287 PqaA PhoPQ-activated p 97.2 0.0073 1.6E-07 47.6 10.7 105 131-239 231-380 (507)
194 KOG2541 Palmitoyl protein thio 97.2 0.0054 1.2E-07 46.2 9.5 99 40-167 24-126 (296)
195 PF08386 Abhydrolase_4: TAP-li 97.1 0.00079 1.7E-08 43.7 4.0 56 184-243 33-92 (103)
196 PF11187 DUF2974: Protein of u 97.0 0.0033 7.2E-08 47.0 6.9 54 110-169 66-123 (224)
197 PF02089 Palm_thioest: Palmito 96.8 0.014 3E-07 44.8 8.8 53 112-167 61-114 (279)
198 cd00519 Lipase_3 Lipase (class 96.8 0.016 3.4E-07 43.7 9.1 64 132-198 126-194 (229)
199 KOG2182 Hydrolytic enzymes of 96.7 0.023 5.1E-07 46.7 9.9 120 36-171 83-209 (514)
200 KOG2369 Lecithin:cholesterol a 96.7 0.0054 1.2E-07 49.9 6.2 49 108-157 157-205 (473)
201 PLN02517 phosphatidylcholine-s 96.7 0.0052 1.1E-07 51.7 6.3 90 55-168 158-262 (642)
202 PLN02454 triacylglycerol lipas 96.7 0.021 4.4E-07 46.4 9.4 82 115-198 208-298 (414)
203 PF01083 Cutinase: Cutinase; 96.5 0.0065 1.4E-07 43.8 5.2 116 109-247 57-179 (179)
204 PLN02408 phospholipase A1 96.5 0.017 3.7E-07 46.1 7.7 62 134-197 200-266 (365)
205 KOG1551 Uncharacterized conser 96.5 0.15 3.2E-06 38.7 11.8 28 132-159 193-220 (371)
206 PF04083 Abhydro_lipase: Parti 96.4 0.011 2.4E-07 34.4 4.8 50 6-56 11-60 (63)
207 PF00450 Peptidase_S10: Serine 96.3 0.039 8.5E-07 45.5 9.5 64 184-247 329-414 (415)
208 PLN02802 triacylglycerol lipas 96.2 0.028 6.1E-07 46.6 7.5 63 134-198 330-397 (509)
209 PF05277 DUF726: Protein of un 96.0 0.047 1E-06 43.5 8.1 69 131-200 217-290 (345)
210 PLN02571 triacylglycerol lipas 96.0 0.016 3.4E-07 47.1 5.4 20 135-154 227-246 (413)
211 PLN02162 triacylglycerol lipas 96.0 0.076 1.7E-06 43.7 9.2 22 132-153 276-297 (475)
212 PLN02324 triacylglycerol lipas 96.0 0.078 1.7E-06 43.1 9.1 21 134-154 215-235 (415)
213 PF11288 DUF3089: Protein of u 95.8 0.048 1E-06 40.0 6.6 44 112-155 73-116 (207)
214 PLN02310 triacylglycerol lipas 95.7 0.1 2.3E-06 42.4 8.9 63 134-198 209-275 (405)
215 KOG2183 Prolylcarboxypeptidase 95.7 0.018 3.8E-07 46.3 4.2 57 111-167 143-200 (492)
216 PLN00413 triacylglycerol lipas 95.6 0.12 2.7E-06 42.6 9.0 67 132-198 282-358 (479)
217 PLN03037 lipase class 3 family 95.6 0.066 1.4E-06 44.7 7.5 63 134-198 318-385 (525)
218 PLN02209 serine carboxypeptida 95.4 0.16 3.6E-06 42.1 9.2 59 110-170 145-213 (437)
219 KOG4389 Acetylcholinesterase/B 95.4 0.11 2.5E-06 42.8 7.9 114 40-169 136-255 (601)
220 PLN03016 sinapoylglucose-malat 95.0 0.16 3.4E-06 42.2 8.1 63 185-248 347-430 (433)
221 PLN02753 triacylglycerol lipas 95.0 0.055 1.2E-06 45.1 5.3 22 133-154 311-332 (531)
222 PLN02934 triacylglycerol lipas 95.0 0.056 1.2E-06 44.9 5.2 35 118-153 306-340 (515)
223 PLN02761 lipase class 3 family 94.9 0.066 1.4E-06 44.7 5.3 20 134-153 294-313 (527)
224 PF08237 PE-PPE: PE-PPE domain 94.6 0.28 6.1E-06 36.8 7.8 43 109-154 26-68 (225)
225 COG2939 Carboxypeptidase C (ca 94.6 0.26 5.7E-06 40.9 8.0 57 110-169 177-236 (498)
226 PF04301 DUF452: Protein of un 94.5 0.099 2.1E-06 38.6 5.1 35 133-169 56-90 (213)
227 PLN02719 triacylglycerol lipas 94.5 0.091 2E-06 43.8 5.3 21 134-154 298-318 (518)
228 PLN02847 triacylglycerol lipas 93.7 0.17 3.7E-06 43.0 5.5 23 132-154 249-271 (633)
229 KOG4540 Putative lipase essent 92.5 0.29 6.2E-06 37.6 4.6 25 132-156 274-298 (425)
230 COG5153 CVT17 Putative lipase 92.5 0.29 6.2E-06 37.6 4.6 25 132-156 274-298 (425)
231 KOG1202 Animal-type fatty acid 91.0 0.91 2E-05 42.2 6.8 97 35-167 2119-2217(2376)
232 KOG1282 Serine carboxypeptidas 91.0 3.4 7.4E-05 34.6 9.7 63 186-248 364-447 (454)
233 KOG4569 Predicted lipase [Lipi 90.6 0.59 1.3E-05 37.5 5.1 22 133-154 170-191 (336)
234 PF09994 DUF2235: Uncharacteri 90.5 6.5 0.00014 30.7 10.5 24 131-154 89-112 (277)
235 PF06850 PHB_depo_C: PHB de-po 89.7 0.35 7.6E-06 35.0 2.7 61 184-244 133-201 (202)
236 PF06309 Torsin: Torsin; Inte 89.1 2 4.4E-05 28.9 5.8 27 35-61 48-76 (127)
237 PTZ00472 serine carboxypeptida 89.1 1 2.2E-05 37.9 5.5 56 114-169 149-216 (462)
238 COG3673 Uncharacterized conser 88.1 6 0.00013 31.3 8.4 22 132-153 120-141 (423)
239 PF06441 EHN: Epoxide hydrolas 87.4 1.7 3.6E-05 28.7 4.6 37 14-57 74-110 (112)
240 KOG2029 Uncharacterized conser 86.1 2.8 6E-05 35.9 6.2 34 121-154 512-546 (697)
241 KOG1282 Serine carboxypeptidas 85.7 1.3 2.9E-05 36.9 4.2 60 108-169 144-213 (454)
242 PF05576 Peptidase_S37: PS-10 84.7 2.4 5.3E-05 34.6 5.1 110 36-170 60-170 (448)
243 COG4553 DepA Poly-beta-hydroxy 84.3 18 0.0004 28.4 11.5 65 184-248 338-410 (415)
244 PLN02209 serine carboxypeptida 83.9 2.4 5.2E-05 35.4 4.9 64 185-249 351-435 (437)
245 PLN02213 sinapoylglucose-malat 83.6 2.3 5E-05 33.9 4.7 64 185-249 233-317 (319)
246 cd03557 L-arabinose_isomerase 83.5 27 0.00059 29.8 12.6 131 109-245 15-161 (484)
247 KOG0256 1-aminocyclopropane-1- 83.1 25 0.00054 29.0 10.8 125 116-244 127-257 (471)
248 PF00450 Peptidase_S10: Serine 82.9 0.75 1.6E-05 38.0 1.7 59 112-170 112-182 (415)
249 PF03283 PAE: Pectinacetyleste 82.3 2.7 5.9E-05 34.1 4.6 34 119-152 140-174 (361)
250 COG0529 CysC Adenylylsulfate k 81.1 16 0.00034 26.5 7.4 38 36-73 19-58 (197)
251 KOG4372 Predicted alpha/beta h 79.8 3.2 7E-05 33.8 4.1 20 133-152 149-168 (405)
252 PLN02213 sinapoylglucose-malat 79.6 11 0.00025 30.0 7.3 61 110-172 29-99 (319)
253 PLN03016 sinapoylglucose-malat 79.2 4.3 9.2E-05 33.9 4.8 56 112-169 145-210 (433)
254 KOG2385 Uncharacterized conser 78.3 8.5 0.00018 32.6 6.1 70 128-198 441-515 (633)
255 PF06792 UPF0261: Uncharacteri 74.7 48 0.001 27.5 15.3 110 47-163 8-124 (403)
256 PF10605 3HBOH: 3HB-oligomer h 74.4 4.5 9.7E-05 34.9 3.7 46 184-229 554-603 (690)
257 PLN02376 1-aminocyclopropane-1 70.3 63 0.0014 27.7 9.7 108 131-244 117-230 (496)
258 KOG2170 ATPase of the AAA+ sup 68.9 4.9 0.00011 31.6 2.6 34 34-67 104-139 (344)
259 cd07224 Pat_like Patatin-like 67.2 11 0.00025 28.5 4.3 29 128-156 23-51 (233)
260 COG4822 CbiK Cobalamin biosynt 65.4 55 0.0012 24.5 7.2 106 110-221 118-235 (265)
261 PF02610 Arabinose_Isome: L-ar 64.2 78 0.0017 25.8 12.6 132 108-245 20-167 (359)
262 PF08484 Methyltransf_14: C-me 63.4 26 0.00057 24.8 5.3 36 132-167 67-102 (160)
263 PF00326 Peptidase_S9: Prolyl 60.8 48 0.001 24.3 6.7 42 38-79 143-187 (213)
264 PF01583 APS_kinase: Adenylyls 60.0 26 0.00056 24.7 4.7 36 39-74 1-38 (156)
265 PRK02399 hypothetical protein; 57.4 1.1E+02 0.0024 25.4 8.6 114 43-163 6-126 (406)
266 cd07210 Pat_hypo_W_succinogene 56.8 22 0.00047 26.7 4.2 26 128-155 24-49 (221)
267 PF10081 Abhydrolase_9: Alpha/ 56.3 66 0.0014 25.2 6.6 87 59-167 54-145 (289)
268 cd07225 Pat_PNPLA6_PNPLA7 Pata 55.3 24 0.00053 28.0 4.4 25 128-154 39-63 (306)
269 cd07230 Pat_TGL4-5_like Triacy 55.2 17 0.00037 30.3 3.7 27 128-156 97-123 (421)
270 cd07198 Patatin Patatin-like p 54.9 24 0.00053 25.1 4.0 26 129-156 23-48 (172)
271 PRK10279 hypothetical protein; 53.7 26 0.00056 27.8 4.3 25 128-154 29-53 (300)
272 cd07207 Pat_ExoU_VipD_like Exo 53.4 26 0.00057 25.4 4.1 26 128-155 23-48 (194)
273 PF00698 Acyl_transf_1: Acyl t 52.4 71 0.0015 25.4 6.7 43 202-244 166-209 (318)
274 COG4822 CbiK Cobalamin biosynt 51.3 59 0.0013 24.3 5.3 37 34-70 133-170 (265)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 50.5 33 0.00072 24.4 4.2 20 136-155 30-49 (175)
276 KOG1202 Animal-type fatty acid 50.2 1.7E+02 0.0036 28.7 8.9 57 190-246 650-711 (2376)
277 cd07227 Pat_Fungal_NTE1 Fungal 50.1 33 0.00071 26.7 4.2 25 128-154 34-58 (269)
278 COG3340 PepE Peptidase E [Amin 49.8 72 0.0016 23.9 5.6 39 37-75 30-71 (224)
279 PF11713 Peptidase_C80: Peptid 48.7 22 0.00048 25.0 2.9 39 108-146 78-116 (157)
280 PF01674 Lipase_2: Lipase (cla 47.7 31 0.00067 25.9 3.7 62 185-248 1-72 (219)
281 PRK13690 hypothetical protein; 47.7 52 0.0011 23.6 4.5 27 117-143 8-35 (184)
282 PF02230 Abhydrolase_2: Phosph 47.3 88 0.0019 23.1 6.2 39 39-77 155-196 (216)
283 PRK02929 L-arabinose isomerase 47.1 1.9E+02 0.0041 25.0 11.3 84 156-245 70-167 (499)
284 cd07204 Pat_PNPLA_like Patatin 46.9 38 0.00083 25.8 4.2 20 137-156 34-53 (243)
285 cd07212 Pat_PNPLA9 Patatin-lik 46.4 18 0.00039 28.8 2.4 19 137-155 35-53 (312)
286 PRK12467 peptide synthase; Pro 45.1 1.1E+02 0.0024 34.1 8.2 87 38-154 3691-3777(3956)
287 KOG1283 Serine carboxypeptidas 44.3 41 0.00089 26.9 3.9 64 110-173 96-170 (414)
288 PLN02607 1-aminocyclopropane-1 43.0 2.1E+02 0.0045 24.3 9.4 109 130-244 117-231 (447)
289 PF08250 Sperm_act_pep: Sperm- 42.7 6 0.00013 13.7 -0.3 6 140-145 1-6 (10)
290 KOG4388 Hormone-sensitive lipa 42.4 61 0.0013 28.4 4.9 62 184-247 786-856 (880)
291 PF14253 AbiH: Bacteriophage a 41.5 16 0.00034 28.2 1.4 18 132-149 233-250 (270)
292 TIGR00632 vsr DNA mismatch end 41.1 26 0.00055 23.4 2.1 16 36-51 53-68 (117)
293 cd07218 Pat_iPLA2 Calcium-inde 40.9 53 0.0011 25.2 4.1 19 138-156 34-52 (245)
294 PF12242 Eno-Rase_NADH_b: NAD( 40.5 86 0.0019 19.1 4.9 24 132-155 38-61 (78)
295 TIGR03709 PPK2_rel_1 polyphosp 40.4 35 0.00076 26.5 3.1 40 37-76 53-94 (264)
296 cd07208 Pat_hypo_Ecoli_yjju_li 40.2 56 0.0012 25.2 4.3 20 137-156 30-49 (266)
297 smart00827 PKS_AT Acyl transfe 39.9 94 0.002 24.3 5.6 24 128-153 78-101 (298)
298 cd07228 Pat_NTE_like_bacteria 39.8 30 0.00065 24.7 2.6 22 135-156 29-50 (175)
299 PLN02231 alanine transaminase 39.5 2.6E+02 0.0056 24.4 9.8 106 131-244 189-302 (534)
300 cd07229 Pat_TGL3_like Triacylg 39.1 45 0.00097 27.6 3.6 31 124-156 103-133 (391)
301 PF03852 Vsr: DNA mismatch end 39.0 33 0.00072 20.7 2.1 20 37-56 54-73 (75)
302 KOG2872 Uroporphyrinogen decar 39.0 72 0.0016 25.1 4.4 34 37-77 250-283 (359)
303 COG4874 Uncharacterized protei 38.9 1.2E+02 0.0026 23.2 5.4 37 58-98 62-98 (318)
304 PRK06207 aspartate aminotransf 38.7 2.3E+02 0.0049 23.5 10.0 18 227-244 192-209 (405)
305 COG1506 DAP2 Dipeptidyl aminop 38.3 1.5E+02 0.0032 26.4 6.9 43 37-79 549-594 (620)
306 COG0331 FabD (acyl-carrier-pro 38.3 87 0.0019 25.0 5.0 22 132-153 83-104 (310)
307 cd01819 Patatin_and_cPLA2 Pata 37.7 70 0.0015 22.3 4.1 19 134-152 28-46 (155)
308 TIGR03131 malonate_mdcH malona 37.6 57 0.0012 25.6 4.0 24 128-153 72-95 (295)
309 cd07209 Pat_hypo_Ecoli_Z1214_l 37.4 33 0.00071 25.6 2.5 21 136-156 28-48 (215)
310 cd00578 L-fuc_L-ara-isomerases 37.3 1.8E+02 0.004 24.6 7.1 80 158-243 63-150 (452)
311 cd07232 Pat_PLPL Patain-like p 37.3 46 0.001 27.7 3.5 31 124-156 87-117 (407)
312 PRK11460 putative hydrolase; P 37.2 1.8E+02 0.0039 21.9 6.6 40 38-77 147-189 (232)
313 COG1752 RssA Predicted esteras 37.1 59 0.0013 25.8 4.0 26 128-155 35-60 (306)
314 COG2830 Uncharacterized protei 36.8 24 0.00053 25.0 1.6 32 134-167 57-88 (214)
315 cd07206 Pat_TGL3-4-5_SDP1 Tria 35.8 59 0.0013 25.8 3.7 26 128-155 93-118 (298)
316 COG1647 Esterase/lipase [Gener 35.7 66 0.0014 24.3 3.7 46 184-234 14-59 (243)
317 PF10662 PduV-EutP: Ethanolami 35.1 1.5E+02 0.0034 20.5 8.5 55 184-243 88-142 (143)
318 COG0436 Aspartate/tyrosine/aro 34.9 2.7E+02 0.0057 23.2 8.6 105 131-245 86-195 (393)
319 PLN02672 methionine S-methyltr 34.9 2.9E+02 0.0063 26.7 8.3 19 226-244 842-860 (1082)
320 PF04260 DUF436: Protein of un 34.6 66 0.0014 22.9 3.4 17 128-144 13-29 (172)
321 cd07231 Pat_SDP1-like Sugar-De 33.3 65 0.0014 25.8 3.6 25 128-154 92-116 (323)
322 KOG1209 1-Acyl dihydroxyaceton 33.1 1.7E+02 0.0037 22.2 5.4 24 132-156 6-29 (289)
323 PF01734 Patatin: Patatin-like 32.7 44 0.00096 23.6 2.6 20 135-154 28-47 (204)
324 PF02606 LpxK: Tetraacyldisacc 32.5 1.3E+02 0.0028 24.2 5.3 51 185-243 227-278 (326)
325 cd07217 Pat17_PNPLA8_PNPLA9_li 32.2 42 0.00092 27.2 2.5 18 137-154 44-61 (344)
326 PF06180 CbiK: Cobalt chelatas 32.0 81 0.0018 24.5 3.9 90 132-225 140-242 (262)
327 TIGR03707 PPK2_P_aer polyphosp 31.8 59 0.0013 24.7 3.1 40 37-76 28-69 (230)
328 COG0552 FtsY Signal recognitio 31.1 1.8E+02 0.0039 23.6 5.6 35 37-71 136-172 (340)
329 COG3727 Vsr DNA G:T-mismatch r 31.0 42 0.00092 22.8 1.9 16 37-52 55-70 (150)
330 cd07213 Pat17_PNPLA8_PNPLA9_li 30.7 45 0.00098 26.1 2.4 19 137-155 37-55 (288)
331 cd07211 Pat_PNPLA8 Patatin-lik 30.6 41 0.0009 26.6 2.2 17 137-153 44-60 (308)
332 PF06500 DUF1100: Alpha/beta h 30.2 57 0.0012 27.2 2.9 62 182-244 186-254 (411)
333 PF05576 Peptidase_S37: PS-10 30.1 1.3E+02 0.0028 25.2 4.8 41 184-230 350-390 (448)
334 PLN02752 [acyl-carrier protein 29.7 86 0.0019 25.3 3.9 18 136-153 126-143 (343)
335 PRK06490 glutamine amidotransf 29.2 2.6E+02 0.0056 21.3 8.8 34 37-73 6-39 (239)
336 TIGR01440 conserved hypothetic 29.0 84 0.0018 22.4 3.1 16 128-143 13-28 (172)
337 PRK13938 phosphoheptose isomer 28.3 2.3E+02 0.005 20.8 5.6 25 132-156 44-68 (196)
338 cd07363 45_DOPA_Dioxygenase Th 28.2 2.8E+02 0.006 21.3 6.8 26 128-153 92-117 (253)
339 TIGR02873 spore_ylxY probable 27.4 21 0.00045 27.8 0.0 34 40-73 231-264 (268)
340 COG3411 Ferredoxin [Energy pro 27.2 83 0.0018 18.4 2.4 29 218-247 18-46 (64)
341 TIGR02764 spore_ybaN_pdaB poly 26.9 15 0.00033 26.6 -0.8 33 40-72 152-187 (191)
342 PF01118 Semialdhyde_dh: Semia 26.5 1.1E+02 0.0024 20.1 3.5 31 135-166 1-32 (121)
343 PF03853 YjeF_N: YjeF-related 26.3 64 0.0014 23.0 2.4 38 37-74 23-60 (169)
344 TIGR00128 fabD malonyl CoA-acy 26.2 55 0.0012 25.4 2.2 20 134-153 83-102 (290)
345 cd02013 TPP_Xsc_like Thiamine 25.7 58 0.0012 23.8 2.1 57 136-196 52-108 (196)
346 TIGR02884 spore_pdaA delta-lac 25.6 27 0.00059 26.2 0.4 35 39-73 186-221 (224)
347 cd02006 TPP_Gcl Thiamine pyrop 25.3 53 0.0011 24.1 1.9 57 136-196 56-112 (202)
348 PRK13936 phosphoheptose isomer 25.3 2.6E+02 0.0057 20.4 5.5 24 132-155 42-65 (197)
349 PF14714 KH_dom-like: KH-domai 25.2 1.2E+02 0.0026 18.5 3.1 38 183-220 36-77 (80)
350 COG4635 HemG Flavodoxin [Energ 24.9 78 0.0017 22.5 2.4 37 186-223 1-37 (175)
351 COG1448 TyrB Aspartate/tyrosin 24.8 1.3E+02 0.0029 24.7 4.0 101 138-244 96-203 (396)
352 PF09370 TIM-br_sig_trns: TIM- 24.2 2.5E+02 0.0054 21.9 5.2 86 137-228 16-120 (268)
353 cd07216 Pat17_PNPLA8_PNPLA9_li 24.0 55 0.0012 26.0 1.8 17 137-153 45-61 (309)
354 PF12122 DUF3582: Protein of u 23.8 94 0.002 20.1 2.5 46 201-247 10-59 (101)
355 PLN02450 1-aminocyclopropane-1 23.6 4.7E+02 0.01 22.3 9.3 105 131-244 109-222 (468)
356 COG2845 Uncharacterized protei 23.5 2.6E+02 0.0057 22.6 5.2 22 132-153 115-136 (354)
357 KOG0635 Adenosine 5'-phosphosu 23.4 1.2E+02 0.0025 21.5 3.0 37 38-74 29-67 (207)
358 PRK14194 bifunctional 5,10-met 23.4 1.6E+02 0.0035 23.4 4.2 25 130-154 156-182 (301)
359 COG3101 Uncharacterized protei 23.4 41 0.0009 23.1 0.9 25 28-52 31-55 (180)
360 PF11144 DUF2920: Protein of u 23.3 77 0.0017 26.3 2.5 44 35-78 31-77 (403)
361 PTZ00376 aspartate aminotransf 23.0 4.4E+02 0.0094 21.8 10.6 79 160-244 125-207 (404)
362 cd07199 Pat17_PNPLA8_PNPLA9_li 22.9 66 0.0014 24.7 2.0 18 137-154 37-54 (258)
363 cd07214 Pat17_isozyme_like Pat 22.8 60 0.0013 26.4 1.9 18 137-154 46-63 (349)
364 TIGR01754 flav_RNR ribonucleot 22.6 2.6E+02 0.0056 19.0 6.1 56 186-246 81-140 (140)
365 cd07221 Pat_PNPLA3 Patatin-lik 22.2 96 0.0021 23.9 2.8 21 136-156 34-54 (252)
366 cd07220 Pat_PNPLA2 Patatin-lik 22.1 83 0.0018 24.2 2.4 21 136-156 38-58 (249)
367 KOG1969 DNA replication checkp 22.0 4E+02 0.0086 24.6 6.5 38 35-74 321-359 (877)
368 PRK10886 DnaA initiator-associ 21.9 3.3E+02 0.0072 20.0 5.6 23 132-154 40-62 (196)
369 cd06259 YdcF-like YdcF-like. Y 21.3 1.8E+02 0.0039 19.9 3.9 28 200-228 79-106 (150)
370 COG3933 Transcriptional antite 21.2 4.1E+02 0.009 22.6 6.1 39 35-75 105-143 (470)
371 KOG4153 Fructose 1,6-bisphosph 21.0 1E+02 0.0022 23.9 2.6 34 37-73 255-288 (358)
372 TIGR02717 AcCoA-syn-alpha acet 21.0 5.2E+02 0.011 22.0 7.4 86 133-224 150-237 (447)
373 COG2185 Sbm Methylmalonyl-CoA 20.9 3E+02 0.0065 19.2 5.4 34 38-71 12-45 (143)
374 PF03575 Peptidase_S51: Peptid 20.3 1.4E+02 0.003 20.8 3.1 12 136-147 70-81 (154)
375 PTZ00445 p36-lilke protein; Pr 20.2 1.8E+02 0.0039 21.9 3.6 70 58-145 34-103 (219)
376 cd05006 SIS_GmhA Phosphoheptos 20.1 3.3E+02 0.0072 19.3 5.6 39 109-154 16-54 (177)
No 1
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=100.00 E-value=6.3e-32 Score=201.22 Aligned_cols=208 Identities=39% Similarity=0.652 Sum_probs=148.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.+++.++||++||+|.+...+..+.... .....+.+.+|.+|..+.+...|..+..||+....+. ....+..++.
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~--~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~--~~~~~~~~i~ 84 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELN--LALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDP--EGPEDEAGIE 84 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHH--TCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSS--SSEB-HHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhc--ccCCceEEEeccCCCCCcccccccCCCceeeccCCCc--chhhhHHHHH
Confidence 56788899999999999885544444421 2234456667777765555556666679998775421 1234678899
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
++++.+.++++...+.+++.++|++.|+|+||.+++.++.++|+.+++++++||+++........... ..++|++++||
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~-~~~~pi~~~hG 163 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEA-LAKTPILIIHG 163 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCC-CCTS-EEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccc-cCCCcEEEEec
Confidence 99999999999887778999999999999999999999999999999999999999876554433222 23789999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+.|+++|.+.++...+.|++.+.+++++.|+|+||....++++++.+||++++
T Consensus 164 ~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 164 DEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp TT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred CCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 99999999999999999999999999999999999999999999999999864
No 2
>PRK11460 putative hydrolase; Provisional
Probab=99.97 E-value=2.6e-28 Score=183.18 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=155.0
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.+++.|+||++||+|++..+|..+++.+...+..+..+. |.++... ....++.||+.... .......++.
T Consensus 11 ~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~-~~g~~~~----~~~~g~~W~~~~~~----~~~~~~~~~~ 81 (232)
T PRK11460 11 PDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVS-VGGPEPS----GNGAGRQWFSVQGI----TEDNRQARVA 81 (232)
T ss_pred CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEEC-CCCCCCc----CCCCCcccccCCCC----CccchHHHHH
Confidence 3456679999999999999999999998876655444333 4343311 11235789875432 1122334556
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
+.++.+.+.++.+. +.+++.++|+++|||+||.+++.++.++|+.+++++.++|...... .....++|++++|
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~------~~~~~~~pvli~h 155 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLP------ETAPTATTIHLIH 155 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccccc------ccccCCCcEEEEe
Confidence 66666766666655 6677888999999999999999999999988888999988754211 1123579999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|++|+++|.+.++++.+.|++.+.++++++|++++|.+..++++.+.+||.+.|..
T Consensus 156 G~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 156 GGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999853
No 3
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=1.4e-26 Score=163.00 Aligned_cols=202 Identities=45% Similarity=0.747 Sum_probs=177.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
...+||++||.|.++..|.++.+ ...+.-+.+.+|.+|.++.+...|..+..||+....+ .+...+.+.+..+.+
T Consensus 2 h~atIi~LHglGDsg~~~~~~~~---~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~--~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWAQFLK---QLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELS--SDAPEDEEGLHRAAD 76 (206)
T ss_pred ceEEEEEEecCCCCCccHHHHHH---cCCCCCeeEEcCCCCCCcccccCCCcccceecceeeC--cccchhhhHHHHHHH
Confidence 35689999999999999866444 4677888999999999999999999999999987763 333448888999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
.+..++++....+++.++|++.|+|+||.++++++..+|..+.+++..+++.+......+.........|++..||+.|+
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADP 156 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCc
Confidence 99999999889999999999999999999999999999989999999999998554444444443348999999999999
Q ss_pred cccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 198 TVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
+||..-.+...+.|+..+.+++++.|+|.+|....++++++..|+.+
T Consensus 157 ~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 157 LVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred eeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
No 4
>COG0400 Predicted esterase [General function prediction only]
Probab=99.95 E-value=4.5e-26 Score=164.99 Aligned_cols=193 Identities=28% Similarity=0.452 Sum_probs=157.0
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.++..|+||++||.|++..++..+.+..... ..+..|.++.. ..++..+..|++...+ +.+++.
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~----~~~is~rG~v~---~~g~~~~f~~~~~~~~--------d~edl~ 77 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELDLVPLPELILPN----ATLVSPRGPVA---ENGGPRFFRRYDEGSF--------DQEDLD 77 (207)
T ss_pred CCCCCCcEEEEEecCCCChhhhhhhhhhcCCC----CeEEcCCCCcc---ccCcccceeecCCCcc--------chhhHH
Confidence 56667789999999999988888755544322 45555544432 3445555556554443 477888
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.....+.+.+.... +.+++.++++++|+|.|+.+++.+..++|..++++++++|..+..... ......+|+++++
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----~~~~~~~pill~h 153 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----LPDLAGTPILLSH 153 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc----ccccCCCeEEEec
Confidence 88888888877776 889999999999999999999999999999999999999988876542 2234689999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|+.|+++|...+.++.+.|++.|.+++...++ +||....++.+.+.+|+.+.+
T Consensus 154 G~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 154 GTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred cCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999 699999999999999998764
No 5
>PRK10566 esterase; Provisional
Probab=99.93 E-value=6.2e-25 Score=167.64 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=136.6
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+++.|+||++||++++...|..+++.|++.||.++.+|+|+++.+.... .......| ...+...
T Consensus 24 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~-~~~~~~~~---------------~~~~~~~ 87 (249)
T PRK10566 24 DTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGD-EARRLNHF---------------WQILLQN 87 (249)
T ss_pred CCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCc-cccchhhH---------------HHHHHHH
Confidence 3467999999999999888988999999999999999999875421000 00000011 1222333
Q ss_pred HHHHHHHHHHHHHc-CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec-cCCC------Ccch----------h--
Q 025550 116 VRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS-GWVP------FNAS----------L-- 175 (251)
Q Consensus 116 ~~~l~~~i~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~-~~~~------~~~~----------~-- 175 (251)
++++.+.+..+.+. .++.++++++|||+||.+++.++.++|+...+++.+. ++.. .... .
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNN 167 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHH
Confidence 44455555544433 3688999999999999999999998886433333332 2111 0000 0
Q ss_pred ----hhhhc----ccCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCe--eEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 176 ----IDQFT----SDAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS--CEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 176 ----~~~~~----~~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
...+. ..+. ++|+|+++|++|..++++.++.+.+.+++.|.+ ++++.++|.+|.+..+..+.+.+||++
T Consensus 168 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~fl~~ 247 (249)
T PRK10566 168 IVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGVAFFRQ 247 (249)
T ss_pred HHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHHHHHHh
Confidence 00000 1123 689999999999999999999999999988764 788999999999999999999999998
Q ss_pred hh
Q 025550 245 RM 246 (251)
Q Consensus 245 ~l 246 (251)
+|
T Consensus 248 ~~ 249 (249)
T PRK10566 248 HL 249 (249)
T ss_pred hC
Confidence 65
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=1.7e-24 Score=167.69 Aligned_cols=201 Identities=17% Similarity=0.192 Sum_probs=143.6
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
.++.++..+.++++.+ .+.++++|+++||++++...|..+++.|.+.||.++++|+||++.+...
T Consensus 5 ~~~~~g~~l~~~~~~~-------~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~-------- 69 (276)
T PHA02857 5 MFNLDNDYIYCKYWKP-------ITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGE-------- 69 (276)
T ss_pred eecCCCCEEEEEeccC-------CCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCc--------
Confidence 4555777777776763 2345688899999999999999999999989999999999988664210
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
.....+....++++...+..+.+ ....++++|+|||+||.+++.++.++|+.++++|++++....
T Consensus 70 --------------~~~~~~~~~~~~d~~~~l~~~~~-~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 70 --------------KMMIDDFGVYVRDVVQHVVTIKS-TYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA 134 (276)
T ss_pred --------------cCCcCCHHHHHHHHHHHHHHHHh-hCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc
Confidence 01122333444555555543321 233468999999999999999999999999999999985431
Q ss_pred cch--------------------------hh-----h-------h-----------------------hcccCCCCCEEE
Q 025550 172 NAS--------------------------LI-----D-------Q-----------------------FTSDAKKTPILW 190 (251)
Q Consensus 172 ~~~--------------------------~~-----~-------~-----------------------~~~~~~~~p~l~ 190 (251)
... .. . . -...+.++|+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 214 (276)
T PHA02857 135 EAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILI 214 (276)
T ss_pred ccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEE
Confidence 100 00 0 0 001247899999
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH-------HHHHHHHHHHHh
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-------ELRNLESWIKTR 245 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~ 245 (251)
++|++|.+++++.++.+.+.+.. +.+++++++++|.+..+ ..+++.+||.++
T Consensus 215 v~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 215 LQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999988777666633 46899999999987633 246777888775
No 7
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.7e-24 Score=160.67 Aligned_cols=186 Identities=19% Similarity=0.265 Sum_probs=143.2
Q ss_pred CCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+++.+|+++||+++.. ..|..++..|+..||.++.+|++|++.+. |. ..-..++..
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd-----Gl-----------------~~yi~~~d~ 108 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD-----GL-----------------HAYVPSFDL 108 (313)
T ss_pred CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC-----CC-----------------cccCCcHHH
Confidence 47788999999999865 66777999999999999999999987752 11 112345566
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------------- 178 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------------- 178 (251)
.++++...++... +......+.+++||||||.+++.++.+.|..+.|+|++++.....+.....
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP 188 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIP 188 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCC
Confidence 6777777777644 444455678999999999999999999999999999998854432221000
Q ss_pred -h--------------------------------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 179 -F--------------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 179 -~--------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
+ ...+...|++++||++|.++.++.++.+
T Consensus 189 ~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~L 268 (313)
T KOG1455|consen 189 TWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKEL 268 (313)
T ss_pred ceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHH
Confidence 0 0125889999999999999999999999
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCH----H----HHHHHHHHHHHh
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISN----E----ELRNLESWIKTR 245 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~----~----~~~~~~~~l~~~ 245 (251)
++..... ++++++|||+-|.+.. + ...+|++||.++
T Consensus 269 ye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 269 YEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9988775 6899999999998652 2 268888898875
No 8
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=3e-24 Score=181.98 Aligned_cols=216 Identities=21% Similarity=0.323 Sum_probs=153.2
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
+.-..++..+..|++.|+... +.++.|+||++||+..... .+....+.|+..||.++.+++++... +|
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~---~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~G------yG- 438 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFD---PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTG------YG- 438 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCC---CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCc------cH-
Confidence 344556778889888865544 3344899999999874433 35556778999999999999986532 12
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..|.+... ..-+..+.+|+.+.++.+.+ ...+|++|++|+|+|+||++++.++...| .+++.++..+.
T Consensus 439 --~~F~~~~~---~~~g~~~~~D~~~~~~~l~~------~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~ 506 (620)
T COG1506 439 --REFADAIR---GDWGGVDLEDLIAAVDALVK------LPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGG 506 (620)
T ss_pred --HHHHHhhh---hccCCccHHHHHHHHHHHHh------CCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCc
Confidence 11211110 00112344444444443322 55678999999999999999999999988 67777666652
Q ss_pred CCCc------------------------chhhh----hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEE
Q 025550 169 VPFN------------------------ASLID----QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF 220 (251)
Q Consensus 169 ~~~~------------------------~~~~~----~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 220 (251)
.... ..... .....++++|+|++||+.|..++.++++.+++.|+..|.++++
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~ 586 (620)
T COG1506 507 VDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVEL 586 (620)
T ss_pred chhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEE
Confidence 2210 00011 1122458999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCH-----HHHHHHHHHHHHhhcC
Q 025550 221 KAYPGLGHSISN-----EELRNLESWIKTRMSC 248 (251)
Q Consensus 221 ~~~~g~~H~~~~-----~~~~~~~~~l~~~l~~ 248 (251)
++||+.+|++.. +...++.+|++++++.
T Consensus 587 ~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 587 VVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 999999999874 2478899999999864
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=3.1e-24 Score=171.31 Aligned_cols=206 Identities=20% Similarity=0.237 Sum_probs=142.0
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+.++..+..+.+.+ +.++.+++|||+||++++... |..+++.|++.||.++.+|+||++.+.... +
T Consensus 66 ~~~~~g~~l~~~~~~p------~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~--~--- 134 (349)
T PLN02385 66 EVNSRGVEIFSKSWLP------ENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH--G--- 134 (349)
T ss_pred EEcCCCCEEEEEEEec------CCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--C---
Confidence 3445555555555542 123466899999999987664 577888898889999999999886642110 0
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
...++.+.++++.++++.+. +...+..+++|+||||||.+++.++.++|+.++++|++++..
T Consensus 135 -----------------~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 135 -----------------YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred -----------------CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 01234445566666665443 223345689999999999999999999999999999998743
Q ss_pred CCcc----------------------------hhhh-----------------hh---------------------cccC
Q 025550 170 PFNA----------------------------SLID-----------------QF---------------------TSDA 183 (251)
Q Consensus 170 ~~~~----------------------------~~~~-----------------~~---------------------~~~~ 183 (251)
.... .... .+ ...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 277 (349)
T PLN02385 198 KIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE 277 (349)
T ss_pred cccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc
Confidence 2100 0000 00 0024
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH--------HHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE--------ELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--------~~~~~~~~l~~~l~ 247 (251)
+++|+++++|++|.+++.+.++.+++.+.. .+.+++++++++|.+..+ ..+.+.+||.+++.
T Consensus 278 i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 278 VSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 789999999999999999887777766643 246888999999987632 34668888888764
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=4.2e-23 Score=163.77 Aligned_cols=206 Identities=17% Similarity=0.234 Sum_probs=141.5
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.++..+.++.+.++ ...+.+++|||+||++.+. ..|..++..|++.||.++.+|+||++.+...
T Consensus 40 ~dg~~l~~~~~~~~-----~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~---------- 104 (330)
T PLN02298 40 PRGLSLFTRSWLPS-----SSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGL---------- 104 (330)
T ss_pred CCCCEEEEEEEecC-----CCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCc----------
Confidence 46666665555421 1124568999999998654 3456677788889999999999988764210
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
.....++...++++..+++.+. ....+..+++|+||||||.+++.++.++|+.++++|++++.....
T Consensus 105 ------------~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 105 ------------RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred ------------cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 0001234445666666666543 222344579999999999999999999999999999988753211
Q ss_pred ch----------------------------hhh-----------------hhc---------------------ccCCCC
Q 025550 173 AS----------------------------LID-----------------QFT---------------------SDAKKT 186 (251)
Q Consensus 173 ~~----------------------------~~~-----------------~~~---------------------~~~~~~ 186 (251)
.. ... .+. ...+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 173 DKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred cccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 00 000 000 023679
Q ss_pred CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH---H-----HHHHHHHHHHHhhcCC
Q 025550 187 PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN---E-----ELRNLESWIKTRMSCS 249 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---~-----~~~~~~~~l~~~l~~~ 249 (251)
|+|+++|++|.+++++.++.+++.+... ..++++++|++|.... + ..+.+.+||.+++..+
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999888887776542 3688899999998642 1 2567889998887643
No 11
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.91 E-value=9.2e-24 Score=157.32 Aligned_cols=176 Identities=18% Similarity=0.231 Sum_probs=126.5
Q ss_pred chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCC
Q 025550 55 NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPN 134 (251)
Q Consensus 55 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 134 (251)
|.....+|+++||.++.+++|+.+.. | ..|..... ......++.+.++.+..+++ +..+|++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~------g---~~~~~~~~------~~~~~~~~~D~~~~i~~l~~---~~~iD~~ 64 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGY------G---KDFHEAGR------GDWGQADVDDVVAAIEYLIK---QYYIDPD 64 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSS------H---HHHHHTTT------TGTTHHHHHHHHHHHHHHHH---TTSEEEE
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCcc------c---hhHHHhhh------ccccccchhhHHHHHHHHhc---cccccce
Confidence 34456688899999999999976432 1 22322111 12233444444444444433 5678999
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------------------hcccC--CC
Q 025550 135 NVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ---------------------------FTSDA--KK 185 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~---------------------------~~~~~--~~ 185 (251)
||+|+|+|+||.+++.++.++|+.+++++..+|..+........ ....+ .+
T Consensus 65 ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 144 (213)
T PF00326_consen 65 RIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIK 144 (213)
T ss_dssp EEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGG
T ss_pred eEEEEcccccccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCC
Confidence 99999999999999999999999999999999866543221110 00123 68
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-----HHHHHHHHHHHHHhhcC
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-----NEELRNLESWIKTRMSC 248 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 248 (251)
+|+|++||++|..||++++..+++.|++.|.+++++++|+++|.+. .+..+.+.+||+++|+.
T Consensus 145 ~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 145 PPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp SEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999776 23478899999999874
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=5.5e-23 Score=162.81 Aligned_cols=189 Identities=12% Similarity=0.031 Sum_probs=136.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.++||++||++++...|..++..+.+.||.++.+|+||++.+......+. .....++.+.++
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~-----------------~~~~~~~~~~~~ 115 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH-----------------RGHVERFNDYVD 115 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC-----------------cCccccHHHHHH
Confidence 457899999999988889999988888999999999998876431110000 001234566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------------------------- 172 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------------------------- 172 (251)
++..+++.+.. ..+..++.++||||||.++..++.++|+.++++|++++.....
T Consensus 116 d~~~~~~~~~~-~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (330)
T PRK10749 116 DLAAFWQQEIQ-PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGY 194 (330)
T ss_pred HHHHHHHHHHh-cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcC
Confidence 77777765432 2245789999999999999999999999999999998753210
Q ss_pred --------------------chh----hh----h------------------------hcccCCCCCEEEEccCCCCccc
Q 025550 173 --------------------ASL----ID----Q------------------------FTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 173 --------------------~~~----~~----~------------------------~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
... .+ . ......+.|+|+++|++|.+++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~ 274 (330)
T PRK10749 195 AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVD 274 (330)
T ss_pred CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC
Confidence 000 00 0 0012478999999999999999
Q ss_pred chhcccchHHHHhcC---CeeEEEEeCCCCCCCCHH-------HHHHHHHHHHH
Q 025550 201 FEAGQAGPPFLEQAG---ISCEFKAYPGLGHSISNE-------ELRNLESWIKT 244 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~---~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~ 244 (251)
++.++.+++.+++.+ ..+++++++|++|....+ ..+++.+||.+
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 275 NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 998888888887764 346899999999987532 24556666654
No 13
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.90 E-value=2.2e-21 Score=149.70 Aligned_cols=204 Identities=14% Similarity=0.106 Sum_probs=135.7
Q ss_pred CCccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCC--Ccc--cCCCCcCCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNN--PVT--CNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~--~~~--~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
++.|+|+++||++++...|.... ....+.|+.++.+|.+..+.. ... ...| ...+||-.... .......
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g-~~~~~~~d~~~---~~~~~~~ 115 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFG-KGAGFYVDATE---EPWSQHY 115 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccccccc-CCccccccCCc---Ccccccc
Confidence 45799999999999888875432 344557899998887432221 000 0000 01223211100 0000011
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------hh-------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------LI------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------~~------- 176 (251)
......++++..+++. ..+++.++++++||||||.+++.++.++|+.++++++++|....... ..
T Consensus 116 ~~~~~~~~~l~~~~~~--~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 193 (275)
T TIGR02821 116 RMYSYIVQELPALVAA--QFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADE 193 (275)
T ss_pred hHHHHHHHHHHHHHHh--hCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccc
Confidence 1222334455554542 34678889999999999999999999999999999999887533210 00
Q ss_pred ---h------hhcccCCCCCEEEEccCCCCcccc-hhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 177 ---D------QFTSDAKKTPILWSHGMADRTVLF-EAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 177 ---~------~~~~~~~~~p~l~~~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
. .........|+++.+|+.|..++. .+++.+.+.+++.|.++++.++||++|.+. ...+.+.++|..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 194 AAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAE 273 (275)
T ss_pred cchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHh
Confidence 0 000112467999999999999998 577789999999999999999999999876 6678899999887
Q ss_pred hh
Q 025550 245 RM 246 (251)
Q Consensus 245 ~l 246 (251)
++
T Consensus 274 ~~ 275 (275)
T TIGR02821 274 RL 275 (275)
T ss_pred hC
Confidence 64
No 14
>PRK13604 luxD acyl transferase; Provisional
Probab=99.90 E-value=1.1e-22 Score=154.91 Aligned_cols=186 Identities=13% Similarity=0.095 Sum_probs=130.2
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPS 92 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~ 92 (251)
+.++..+.+++..|.. ....+.++||++||++.....+..++++|+++||.++++|++++ +.+...
T Consensus 16 ~~dG~~L~Gwl~~P~~----~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~--------- 82 (307)
T PRK13604 16 LENGQSIRVWETLPKE----NSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGT--------- 82 (307)
T ss_pred cCCCCEEEEEEEcCcc----cCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc---------
Confidence 4567888888887432 12456789999999999877788899999999999999999865 543211
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
+-+. . ......|+..++++++ +. +.++|+|+||||||.++..+|... .++++|+.+|+.+..
T Consensus 83 ~~~~-t------~s~g~~Dl~aaid~lk-------~~--~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 83 IDEF-T------MSIGKNSLLTVVDWLN-------TR--GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR 144 (307)
T ss_pred cccC-c------ccccHHHHHHHHHHHH-------hc--CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH
Confidence 1000 0 0112234444444442 22 346899999999999987665533 389999999976622
Q ss_pred ch--------------------------------hhhh-----hc--------ccCCCCCEEEEccCCCCcccchhcccc
Q 025550 173 AS--------------------------------LIDQ-----FT--------SDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 173 ~~--------------------------------~~~~-----~~--------~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
.. +... +. ....+.|+|++||+.|..|+++.++.+
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l 224 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDL 224 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHH
Confidence 00 0000 01 123679999999999999999999988
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
++.++. .++++++++|++|.+..
T Consensus 225 ~e~~~s--~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 225 LDSIRS--EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHhcc--CCcEEEEeCCCccccCc
Confidence 888764 36899999999999863
No 15
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.89 E-value=2.2e-22 Score=150.35 Aligned_cols=193 Identities=19% Similarity=0.252 Sum_probs=124.3
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCC-CCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPN-NPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.+.|.||++|+..+-....+.+++.|++.||.++.+|+-.... .+... ......+... ........
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~~~ 78 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDP--EEAFAAMREL-----------FAPRPEQV 78 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCH--HCHHHHHHHC-----------HHHSHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccch--hhHHHHHHHH-----------HhhhHHHH
Confidence 5889999999988877777779999999999999999753321 00000 0000000000 00002234
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM 194 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~ 194 (251)
.+.+...++.+. +..++.++|+++|+|+||.+++.++... +.+++++.+.|....... .....+.++|+++++|+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~---~~~~~~~~~P~l~~~g~ 154 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPP---LEDAPKIKAPVLILFGE 154 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGH---HHHGGG--S-EEEEEET
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcc---hhhhcccCCCEeecCcc
Confidence 455555566555 3336778999999999999999998887 579999999982211111 11234578999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH------------HHHHHHHHHHHHhh
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN------------EELRNLESWIKTRM 246 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~------------~~~~~~~~~l~~~l 246 (251)
+|+.++.+..+.+.+.+++.+.++++++|+|++|.|.. +.++.+.+||+++|
T Consensus 155 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 155 NDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999999889999999999999999999999998852 23677888887765
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=1.6e-21 Score=152.98 Aligned_cols=183 Identities=11% Similarity=0.092 Sum_probs=130.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+++.|.+.||.++++|+|+++.+... + .....++.+.++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~---------~------------~~~~~~~~~~a~ 103 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKP---------T------------RREDYTYARHVE 103 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCC---------C------------CcccCCHHHHHH
Confidence 3578999999999999999999999878999999999988653110 0 011234556677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------ 173 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------ 173 (251)
++.+++++ . +.+++.++|||+||.++..++.++|+.+++++++++..+...
T Consensus 104 ~l~~~l~~---l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T PRK00870 104 WMRSWFEQ---L--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGR 178 (302)
T ss_pred HHHHHHHH---c--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHH
Confidence 77777763 2 346899999999999999999999999999998875321100
Q ss_pred ------------hhhhhh-------------------------------------cccCCCCCEEEEccCCCCcccchhc
Q 025550 174 ------------SLIDQF-------------------------------------TSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 ------------~~~~~~-------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
.....+ ...++++|+++++|++|.+++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 257 (302)
T PRK00870 179 LVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD- 257 (302)
T ss_pred HhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-
Confidence 000000 002367899999999999998754
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+.+.+.+... ..+++.+++++||....+..+.+.+.|.+++..
T Consensus 258 ~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 258 AILQKRIPGA-AGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred HHHHhhcccc-cccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 4454444331 013477899999999877777777777777654
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=6.9e-22 Score=151.18 Aligned_cols=179 Identities=17% Similarity=0.262 Sum_probs=131.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.|+||++||++++...|..+++.+. .+|.++.+|+||++.+... .....++.+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~ 67 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGE----------------------LPPGYSIAHMA 67 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCC----------------------CcccCCHHHHH
Confidence 456899999999999999988888776 5799999999987654211 11223455666
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh--------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI-------------------- 176 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~-------------------- 176 (251)
+++.++++. . +.++++++|||+||.+++.++.++|+.++++|+++++........
T Consensus 68 ~~~~~~i~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T TIGR03611 68 DDVLQLLDA---L--NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVH 142 (257)
T ss_pred HHHHHHHHH---h--CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhh
Confidence 677777663 2 346899999999999999999999999999998887443210000
Q ss_pred -------------h-----------h-----------------------hcccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 177 -------------D-----------Q-----------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 177 -------------~-----------~-----------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
. . ......++|+++++|++|..++.+.++.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 222 (257)
T TIGR03611 143 AQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAA 222 (257)
T ss_pred hhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHH
Confidence 0 0 0012368999999999999999887766665
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ..+++.++++||....+..+++.+.+.++|.
T Consensus 223 ~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 223 ALP----NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred hcC----CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 543 3578889999999887777777777777664
No 18
>PLN02442 S-formylglutathione hydrolase
Probab=99.88 E-value=1.1e-20 Score=146.21 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=131.3
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCC--C-cCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYG--A-VMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g--~-~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+|+++||++++...|.. +.+.+...|+.++.+|.+..+........+ . ...+++..... ......
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 119 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ----EKWKNW 119 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc----CCCccc
Confidence 4578999999999988776644 335667789988888876443210000000 0 00111100000 000001
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-h-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-L------------- 175 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-~------------- 175 (251)
.......+++...++... ..++.++++|+||||||.+++.++.++|+.++++++++|....... .
T Consensus 120 ~~~~~~~~~l~~~i~~~~-~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 198 (283)
T PLN02442 120 RMYDYVVKELPKLLSDNF-DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDK 198 (283)
T ss_pred chhhhHHHHHHHHHHHHH-HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCCh
Confidence 112223444555554432 1257789999999999999999999999999999999987643210 0
Q ss_pred --hhhhc-------ccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 176 --IDQFT-------SDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 176 --~~~~~-------~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
..... ....++|+++++|++|..++.. +++.+++.+++.|.++++++++|.+|.+. ...+++...|..
T Consensus 199 ~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~ 278 (283)
T PLN02442 199 ADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFFIATFIDDHINHHA 278 (283)
T ss_pred hhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHHH
Confidence 00000 1136789999999999998864 46789999999999999999999999865 333455555555
Q ss_pred Hhhc
Q 025550 244 TRMS 247 (251)
Q Consensus 244 ~~l~ 247 (251)
+.++
T Consensus 279 ~~~~ 282 (283)
T PLN02442 279 QALK 282 (283)
T ss_pred HHhc
Confidence 5543
No 19
>PLN02965 Probable pheophorbidase
Probab=99.88 E-value=1.5e-21 Score=149.37 Aligned_cols=178 Identities=15% Similarity=0.122 Sum_probs=130.8
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
..|||+||++.+...|..+++.|.+.+|.++.+|+||++.+... .....++.+.++++
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a~dl 61 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTD----------------------SNTVSSSDQYNRPL 61 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCC----------------------ccccCCHHHHHHHH
Confidence 34999999999999999999999888999999999988654211 01123355667777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----c---------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----A--------------------- 173 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~--------------------- 173 (251)
.++++. .+. .+++.++||||||.++..++.++|+++++++++++..... .
T Consensus 62 ~~~l~~---l~~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T PLN02965 62 FALLSD---LPP-DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGP 137 (255)
T ss_pred HHHHHh---cCC-CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCC
Confidence 777773 222 2589999999999999999999999999999887541000 0
Q ss_pred -----------hhh-hh-hc-------------------------------ccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 174 -----------SLI-DQ-FT-------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 174 -----------~~~-~~-~~-------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
... .. +. ....++|+++++|++|..++++.++.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~ 217 (255)
T PLN02965 138 DKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVE 217 (255)
T ss_pred CCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHH
Confidence 000 00 00 01378999999999999999876655555
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.. .++++++++||+...+..+.+.+.|.+++.
T Consensus 218 ~~~~----a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 218 NWPP----AQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred hCCc----ceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 4443 588899999999998888887777777664
No 20
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.88 E-value=6e-21 Score=147.80 Aligned_cols=202 Identities=22% Similarity=0.349 Sum_probs=144.6
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
..++..+..+.+. +.+++..+||++||.+.+...|..++..|..+||.++.+|.||++.+.. |.
T Consensus 16 ~~d~~~~~~~~~~-------~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r----~~----- 79 (298)
T COG2267 16 GADGTRLRYRTWA-------APEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR----GQ----- 79 (298)
T ss_pred cCCCceEEEEeec-------CCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC----CC-----
Confidence 3455555544454 2333448999999999999999999999999999999999999877531 10
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
.....++.+.+.++..+++..... ....+++|+||||||.+++.++.+++..+.++|+.+|.+....
T Consensus 80 ------------rg~~~~f~~~~~dl~~~~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 80 ------------RGHVDSFADYVDDLDAFVETIAEP-DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred ------------cCCchhHHHHHHHHHHHHHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 112233556666666666654322 2457899999999999999999999999999999998665441
Q ss_pred --h--------------------hhh----h-----hc---------------------------------------ccC
Q 025550 174 --S--------------------LID----Q-----FT---------------------------------------SDA 183 (251)
Q Consensus 174 --~--------------------~~~----~-----~~---------------------------------------~~~ 183 (251)
. ... . .+ ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~ 226 (298)
T COG2267 147 AILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPA 226 (298)
T ss_pred hHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcccc
Confidence 0 000 0 00 013
Q ss_pred CCCCEEEEccCCCCccc-chhcccchHHHHhcCCe-eEEEEeCCCCCCCCHH-------HHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVL-FEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISNE-------ELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~-~~~~~~~~~~l~~~~~~-~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~l~ 247 (251)
..+|+++++|++|.+++ .+ ...+.++..+.+ +++++++|+-|....| ..+.+.+|+.+.++
T Consensus 227 ~~~PvLll~g~~D~vv~~~~---~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVE---GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccCCEEEEecCCCccccCcH---HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999 45 455555555555 6999999999987532 35677777777664
No 21
>PRK10162 acetyl esterase; Provisional
Probab=99.88 E-value=2.3e-20 Score=146.72 Aligned_cols=182 Identities=20% Similarity=0.324 Sum_probs=135.0
Q ss_pred CccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..|+||++||+|. +...+..+++.++. .|+.++.+||+.+|+.+. +....++.
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~-----------------------p~~~~D~~ 136 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF-----------------------PQAIEEIV 136 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC-----------------------CCcHHHHH
Confidence 4689999999883 44556667776665 599999999998775321 33456677
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcchhh-----------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNASLI----------- 176 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~~~~----------- 176 (251)
++++++.+..+ +.+++.++|+|+|+|+||.+++.++.+. +..++++++++|.........
T Consensus 137 ~a~~~l~~~~~---~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l 213 (318)
T PRK10162 137 AVCCYFHQHAE---DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGL 213 (318)
T ss_pred HHHHHHHHhHH---HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCcccc
Confidence 77777766555 5678889999999999999999988753 246889999988664321100
Q ss_pred ---------------------hhhcc--c---CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 177 ---------------------DQFTS--D---AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 177 ---------------------~~~~~--~---~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
....+ . ..-.|+++++|+.|.+. ++++.+.++|++.|+++++++++|..|.+
T Consensus 214 ~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~H~f 291 (318)
T PRK10162 214 TQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTLHAF 291 (318)
T ss_pred CHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCceeh
Confidence 00000 0 12369999999999885 47889999999999999999999999986
Q ss_pred C---------HHHHHHHHHHHHHhhc
Q 025550 231 S---------NEELRNLESWIKTRMS 247 (251)
Q Consensus 231 ~---------~~~~~~~~~~l~~~l~ 247 (251)
. .+..+++.+||++.++
T Consensus 292 ~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 292 LHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred hhccCchHHHHHHHHHHHHHHHHHhc
Confidence 4 1336778888888775
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=6.7e-22 Score=138.44 Aligned_cols=145 Identities=22% Similarity=0.347 Sum_probs=110.5
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
+||++||++++...|..+++.+++.||.++.+|+|+.+.. ....+ ++.+.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~----~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDS--------------------------DGADA----VERVL 50 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTS--------------------------HHSHH----HHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCcc--------------------------chhHH----HHHHH
Confidence 5899999999998899999999999999999999865331 01112 22222
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCccc
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
+.+.. ... +.++++++|||+||.+++.++.++ ..++++++++++.. .. .....+.|+++++|++|..++
T Consensus 51 ~~~~~--~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-~~------~~~~~~~pv~~i~g~~D~~~~ 119 (145)
T PF12695_consen 51 ADIRA--GYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-SE------DLAKIRIPVLFIHGENDPLVP 119 (145)
T ss_dssp HHHHH--HHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG-CH------HHTTTTSEEEEEEETT-SSSH
T ss_pred HHHHh--hcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc-hh------hhhccCCcEEEEEECCCCcCC
Confidence 22211 223 788999999999999999999988 57999999999422 11 113467899999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+..+.+++.++ .+.++++++|++|+
T Consensus 120 ~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 120 PEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred HHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 998888877776 46899999999995
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.87 E-value=4.6e-21 Score=148.43 Aligned_cols=176 Identities=15% Similarity=0.146 Sum_probs=126.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+.+.|.+ +|.++++|+||++.+.. +....++....+
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~-----------------------~~~~~~~~~~~~ 79 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSST-----------------------PRHPYRFPGLAK 79 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCC-----------------------CCCcCcHHHHHH
Confidence 346799999999999999999998864 79999999998866421 111223455566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-------------c--hh-------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-------------A--SL------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-------------~--~~------- 175 (251)
++.++++.+ +.+++.|+||||||.+++.+|.++|+.+++++++++..... . ..
T Consensus 80 ~~~~~i~~l-----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
T TIGR02240 80 LAARMLDYL-----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGI 154 (276)
T ss_pred HHHHHHHHh-----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcccccc
Confidence 666666632 34689999999999999999999999999999987643100 0 00
Q ss_pred ---h--------h------h----------------------h---c-ccCCCCCEEEEccCCCCcccchhcccchHHHH
Q 025550 176 ---I--------D------Q----------------------F---T-SDAKKTPILWSHGMADRTVLFEAGQAGPPFLE 212 (251)
Q Consensus 176 ---~--------~------~----------------------~---~-~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~ 212 (251)
. . . . . ..++++|+++++|++|..++.+.++.+.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~ 234 (276)
T TIGR02240 155 HIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP 234 (276)
T ss_pred chhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC
Confidence 0 0 0 0 0 02477899999999999999887766665553
Q ss_pred hcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 213 QAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 213 ~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+++++++ ||....+..+.+.+.+.+++.
T Consensus 235 ----~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 235 ----NAELHIIDD-GHLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred ----CCEEEEEcC-CCchhhccHHHHHHHHHHHHH
Confidence 357777886 999887776666666666654
No 24
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=7.9e-21 Score=148.48 Aligned_cols=183 Identities=15% Similarity=0.173 Sum_probs=130.1
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+.+.|... ++++.+|+||++.+....... + ......++.+.+++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~-----~-----------~~~~~~~~~~~a~~ 91 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRS-----A-----------PPNSFYTFETWGEQ 91 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCcccc-----c-----------cccccCCHHHHHHH
Confidence 378999999999999999999988755 699999999887643110000 0 00112455566777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc---------ch----h----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN---------AS----L---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~---------~~----~---------- 175 (251)
+.+++++ .+ .+++.|+||||||.+++.++.++|++++++|++++..... .. +
T Consensus 92 l~~~l~~---l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T PLN02824 92 LNDFCSD---VV--GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVG 166 (294)
T ss_pred HHHHHHH---hc--CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHH
Confidence 7777763 33 4689999999999999999999999999999988643100 00 0
Q ss_pred -------------hh----------h-------------------------h--c--------ccCCCCCEEEEccCCCC
Q 025550 176 -------------ID----------Q-------------------------F--T--------SDAKKTPILWSHGMADR 197 (251)
Q Consensus 176 -------------~~----------~-------------------------~--~--------~~~~~~p~l~~~g~~D~ 197 (251)
.. . . . ..++++|+++++|++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 246 (294)
T PLN02824 167 KAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDP 246 (294)
T ss_pred HHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCC
Confidence 00 0 0 0 01368899999999999
Q ss_pred cccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 198 TVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.++.+.++. +.+.....++++++++||....+..+.+.+-|.+++.
T Consensus 247 ~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 247 WEPVELGRA----YANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred CCChHHHHH----HHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 999876544 3333333688999999999988887777777777664
No 25
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.87 E-value=2.5e-20 Score=150.84 Aligned_cols=197 Identities=15% Similarity=0.127 Sum_probs=131.9
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.++..+..|+..|. .+++.|+||++||.++.. ..|..+++.+++.||.++.+|+|+.+.+.. +
T Consensus 176 ~~g~~l~g~l~~P~------~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~----------~ 239 (414)
T PRK05077 176 PGGGPITGFLHLPK------GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK----------W 239 (414)
T ss_pred CCCcEEEEEEEECC------CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC----------C
Confidence 34447777776532 235678888888877765 456678888999999999999998755310 0
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN- 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~- 172 (251)
.. ..+.......+.+.+.. ...+|.++|+++|||+||.+++.+|..+|++++++|++++.....
T Consensus 240 ------------~~-~~d~~~~~~avld~l~~--~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~ 304 (414)
T PRK05077 240 ------------KL-TQDSSLLHQAVLNALPN--VPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLL 304 (414)
T ss_pred ------------Cc-cccHHHHHHHHHHHHHh--CcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhh
Confidence 00 01111112222222221 345688999999999999999999999998999999988755310
Q ss_pred ----------ch----hhhh-----------------hc-------ccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 173 ----------AS----LIDQ-----------------FT-------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 173 ----------~~----~~~~-----------------~~-------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.. +... +. ..+.++|+|+++|++|.++|.+.++.+.+..
T Consensus 305 ~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~--- 381 (414)
T PRK05077 305 TDPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS--- 381 (414)
T ss_pred cchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC---
Confidence 00 0000 00 1247789999999999999999776554433
Q ss_pred CCeeEEEEeCCCCCCC-CHHHHHHHHHHHHHhh
Q 025550 215 GISCEFKAYPGLGHSI-SNEELRNLESWIKTRM 246 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~-~~~~~~~~~~~l~~~l 246 (251)
.+.++++++++.|.- ..+..+.+.+||.++|
T Consensus 382 -~~~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 382 -ADGKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred -CCCeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 346888999863322 2455788999998876
No 26
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=1.9e-20 Score=150.42 Aligned_cols=186 Identities=23% Similarity=0.298 Sum_probs=130.2
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...+++||++||++++...|..+++.|++.||.++.+|+++++.+.... + ...+....
T Consensus 133 ~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~--~--------------------~~~~~~~~ 190 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH--G--------------------YVPSLDYV 190 (395)
T ss_pred CCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--C--------------------CCcCHHHH
Confidence 3456899999999998888999999999999999999999886642110 0 01123334
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcch------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNAS------------------ 174 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~------------------ 174 (251)
.+++..+++.+... .+..+++|+||||||.+++.++. +|+ .++++|+.+++......
T Consensus 191 ~~Dl~~~l~~l~~~-~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 191 VEDTEAFLEKIRSE-NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHHHHHHHHh-CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 44555555543221 23457999999999999987664 553 68999999886422100
Q ss_pred ------------------hhhhh---------------------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 ------------------LIDQF---------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 ------------------~~~~~---------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
....+ ...++++|+|+++|++|.+++++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00000 002368999999999999999998877777
Q ss_pred HHHhcCCeeEEEEeCCCCCCCC-----HHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSIS-----NEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~ 247 (251)
.+.. ..+++++++|++|... .+..+.+.+||..++.
T Consensus 349 ~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 349 EAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred hcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 6644 2467889999999863 2346788899988875
No 27
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=3.6e-21 Score=136.40 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=128.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
..+|+++||+.++..+.+.+++.|+++||.+.++.|||++..+..... ....+..+.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-----------------------t~~~DW~~~ 71 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-----------------------TTPRDWWED 71 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-----------------------CCHHHHHHH
Confidence 389999999999999999999999999999999999998775422111 111122333
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--h----h---hh-----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--L----I---DQ----------- 178 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--~----~---~~----------- 178 (251)
+.+..+.+...+ -+.|.++|.||||.+++.+|.++| +++++.+|+....... . . +.
T Consensus 72 v~d~Y~~L~~~g--y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~ 147 (243)
T COG1647 72 VEDGYRDLKEAG--YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQ 147 (243)
T ss_pred HHHHHHHHHHcC--CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHH
Confidence 333333322233 458999999999999999999998 8899988875542211 0 0 00
Q ss_pred -------hc--------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 -------FT--------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 -------~~--------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
+. ...+..|++++.|.+|+.++.+.+..+++..... +.++..|++.||...
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt 225 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLEGSGHVIT 225 (243)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC--cceeEEEccCCceee
Confidence 00 1248899999999999999999998888888764 689999999999987
Q ss_pred HHH-----HHHHHHHHH
Q 025550 232 NEE-----LRNLESWIK 243 (251)
Q Consensus 232 ~~~-----~~~~~~~l~ 243 (251)
.+. .+.+..||+
T Consensus 226 ~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 226 LDKERDQVEEDVITFLE 242 (243)
T ss_pred cchhHHHHHHHHHHHhh
Confidence 432 355556654
No 28
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=1e-19 Score=136.14 Aligned_cols=211 Identities=17% Similarity=0.254 Sum_probs=152.0
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
..+..+..|+..|. .....|.||++|+..+-....+.+++.++..||.++++|+-........... ...+.
T Consensus 9 ~~~~~~~~~~a~P~------~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~---~~~~~ 79 (236)
T COG0412 9 APDGELPAYLARPA------GAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIED---EPAEL 79 (236)
T ss_pred CCCceEeEEEecCC------cCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccc---cHHHH
Confidence 34466666666521 2223399999999999888999999999999999999997543221111110 00000
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC-CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG-IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
.. ........ .+...++...++.+.+.. ++.++|+++|+|+||.+++.++...| .+++.+++.|......
T Consensus 80 ~~-------~~~~~~~~-~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~ 150 (236)
T COG0412 80 ET-------GLVERVDP-AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD 150 (236)
T ss_pred hh-------hhhccCCH-HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc
Confidence 00 00001111 455666666666655333 78899999999999999999998888 6999999998765433
Q ss_pred hhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH---------------HHHHH
Q 025550 174 SLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE---------------ELRNL 238 (251)
Q Consensus 174 ~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~---------------~~~~~ 238 (251)
.. ...+.++|+++.+|+.|..++.+..+.+.+.+.+.+..+++.+|+++.|.|..+ .++++
T Consensus 151 ~~----~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~ 226 (236)
T COG0412 151 TA----DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRV 226 (236)
T ss_pred cc----ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHH
Confidence 22 135689999999999999999999999999999988889999999988987632 26888
Q ss_pred HHHHHHhhc
Q 025550 239 ESWIKTRMS 247 (251)
Q Consensus 239 ~~~l~~~l~ 247 (251)
.+||.+.+.
T Consensus 227 ~~ff~~~~~ 235 (236)
T COG0412 227 LAFFKRLLG 235 (236)
T ss_pred HHHHHHhcc
Confidence 899988775
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.86 E-value=1.3e-20 Score=144.32 Aligned_cols=177 Identities=14% Similarity=0.088 Sum_probs=126.0
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...|.||++||++++...|..++..|. .+|.++.+|+|+++.+.. ....++.+.+
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~------------------------~~~~~~~~~~ 68 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPR------------------------DPVMNYPAMA 68 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCC------------------------CCCCCHHHHH
Confidence 456899999999999989988888886 579999999998755310 1123455667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--------------------hh-
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------------------SL- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------------------~~- 175 (251)
+++.++++. . +.+++.|+||||||.+++.++.++|+++++++++++...... ..
T Consensus 69 ~d~~~~l~~---l--~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (255)
T PRK10673 69 QDLLDTLDA---L--QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQ 143 (255)
T ss_pred HHHHHHHHH---c--CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHH
Confidence 777777763 2 346799999999999999999999999999998753211000 00
Q ss_pred ------hhh-----------------------------hc-------ccCCCCCEEEEccCCCCcccchhcccchHHHHh
Q 025550 176 ------IDQ-----------------------------FT-------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213 (251)
Q Consensus 176 ------~~~-----------------------------~~-------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~ 213 (251)
... .. ....++|+++++|++|..++.+..+.+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 221 (255)
T PRK10673 144 QAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-- 221 (255)
T ss_pred HHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--
Confidence 000 00 0124689999999999998876544444433
Q ss_pred cCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 214 AGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 214 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.++++++++||....+..+.+.+-+.++|.
T Consensus 222 --~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 222 --PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred --CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHh
Confidence 34688899999999877666666666666654
No 30
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.86 E-value=2.3e-20 Score=145.08 Aligned_cols=178 Identities=19% Similarity=0.241 Sum_probs=122.9
Q ss_pred ccEEEEEecCCCCCCCchhh---hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPI---KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|.||++||++.+...|..+ ...+.+.||.++++|+||++.+.... ....... ..
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~-~~ 87 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVV---------------------MDEQRGL-VN 87 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCc---------------------Ccccccc-hh
Confidence 36799999999887777542 34566679999999999876542110 0000111 12
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC------cc----------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF------NA---------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~------~~---------------- 173 (251)
.+.+.++++. ++.++++++||||||.+++.++.++|+++++++++++.... ..
T Consensus 88 ~~~l~~~l~~-----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T TIGR03343 88 ARAVKGLMDA-----LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSY 162 (282)
T ss_pred HHHHHHHHHH-----cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCH
Confidence 4455555552 25679999999999999999999999999999988753100 00
Q ss_pred -------------------hhhh--------------hh----------------cccCCCCCEEEEccCCCCcccchhc
Q 025550 174 -------------------SLID--------------QF----------------TSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 -------------------~~~~--------------~~----------------~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
.... .+ ....+++|+++++|++|..++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 163 ETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 0000 00 0013679999999999999998876
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+.+. ++++++++++||....+..+.+.+.|.++++
T Consensus 243 ~~~~~~~~----~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNMP----DAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhCC----CCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 66555553 4688999999999988877777777777664
No 31
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.85 E-value=2.8e-20 Score=144.10 Aligned_cols=177 Identities=17% Similarity=0.153 Sum_probs=126.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.||++||++++...|..+.+.++ .+|.++.+|+|+++.+... .....++...++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~~ 83 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAP----------------------FRFRFTLPSMAE 83 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCc----------------------cccCCCHHHHHH
Confidence 35789999999999999999888886 4699999999987653211 011234555566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------ 173 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------ 173 (251)
++.++++ .. +.++++|+|||+||.+++.++.++|+++++++++++......
T Consensus 84 ~l~~~i~---~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (278)
T TIGR03056 84 DLSALCA---AE--GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMM 158 (278)
T ss_pred HHHHHHH---Hc--CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHH
Confidence 6666665 32 346789999999999999999999998998888765321000
Q ss_pred --------hhh------------------h-hh-----------------------cccCCCCCEEEEccCCCCcccchh
Q 025550 174 --------SLI------------------D-QF-----------------------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 174 --------~~~------------------~-~~-----------------------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
... . .. ...++++|+++++|++|..++.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 159 SRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred HhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHH
Confidence 000 0 00 012357899999999999999886
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++.+.+.+. ..+++.++++||.+..+..+.+.+-|.+++
T Consensus 239 ~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 239 SKRAATRVP----TATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred HHHHHHhcc----CCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 655554443 357889999999988777777777666665
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=1.5e-20 Score=140.81 Aligned_cols=169 Identities=22% Similarity=0.373 Sum_probs=126.7
Q ss_pred EEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (251)
|||+||++++...|..+++.|+ +||.++.+|+|+.+.+.... .....+..+.++++.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~---------------------~~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPP---------------------DYSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHS---------------------SGSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCcccccccc---------------------ccCCcchhhhhhhhhh
Confidence 7999999999999999999885 89999999999876542111 0123456666777777
Q ss_pred HHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------hhhh---------------
Q 025550 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------LIDQ--------------- 178 (251)
Q Consensus 122 ~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------~~~~--------------- 178 (251)
+++. .+ .+++.++|||+||.+++.++.++|+.+++++++++....... ....
T Consensus 59 ~l~~---~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T PF12697_consen 59 LLDA---LG--IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASR 133 (228)
T ss_dssp HHHH---TT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc---cc--cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 7773 33 368999999999999999999999999999999987742110 0000
Q ss_pred -------------------------h-----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 179 -------------------------F-----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 179 -------------------------~-----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
+ .....++|+++++|++|..++.+..+.+.+.+ .++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~ 209 (228)
T PF12697_consen 134 FFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVV 209 (228)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEE
Confidence 0 00247899999999999999866544443333 3579999
Q ss_pred eCCCCCCCCHHHHHHHHHH
Q 025550 223 YPGLGHSISNEELRNLESW 241 (251)
Q Consensus 223 ~~g~~H~~~~~~~~~~~~~ 241 (251)
++++||....+..+++.+|
T Consensus 210 ~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 210 IPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ETTSSSTHHHHSHHHHHHH
T ss_pred ECCCCCccHHHCHHHHhcC
Confidence 9999999988888888765
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.85 E-value=1.8e-20 Score=142.61 Aligned_cols=176 Identities=16% Similarity=0.261 Sum_probs=127.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.+|+||++||++.+...|..+++.+. .+|.++.+|+|+++.+.. .....+..+.++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~-----------------------~~~~~~~~~~~~ 67 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDA-----------------------PEGPYSIEDLAD 67 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 56899999999999999999888886 689999999998755310 111224445566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--h---------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--S--------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~--------------------- 174 (251)
++.+.++. . +.+++.++|||+||.+++.+|.++|+.+++++++++...... .
T Consensus 68 ~~~~~i~~---~--~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (251)
T TIGR02427 68 DVLALLDH---L--GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVL 142 (251)
T ss_pred HHHHHHHH---h--CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHH
Confidence 66666653 2 346899999999999999999999999998887764321100 0
Q ss_pred ------------------hhhh---------------h-------cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 175 ------------------LIDQ---------------F-------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 175 ------------------~~~~---------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.... + ...+.++|+++++|++|..++.+..+.+.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-- 220 (251)
T TIGR02427 143 ERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-- 220 (251)
T ss_pred HHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--
Confidence 0000 0 002367999999999999999886655554443
Q ss_pred CCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 215 GISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..+++.+++++|....+..+.+.+.+.+++
T Consensus 221 --~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 221 --GARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred --CceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 358889999999988777777777777765
No 34
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.85 E-value=1.9e-20 Score=139.19 Aligned_cols=163 Identities=28% Similarity=0.295 Sum_probs=108.8
Q ss_pred CCCccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+++.|+||++||++++...+. .+...+.+.|+.++.+++++.... ....+|+..... .....+..++
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~-------~~~~~~~~~~~~---~~~~~~~~~~ 79 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSS-------NNCWDWFFTHHR---ARGTGEVESL 79 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCcccc-------CCCCCCCCcccc---CCCCccHHHH
Confidence 467899999999998776665 255566678999999998865321 112244432210 0111122233
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------h
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-----------------L 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-----------------~ 175 (251)
.+.++.+.+ +..++.++++|+|||+||.+++.++.++|+.+++++.++|....... +
T Consensus 80 ~~~i~~~~~------~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (212)
T TIGR01840 80 HQLIDAVKA------NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASV 153 (212)
T ss_pred HHHHHHHHH------hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHH
Confidence 222222222 56788899999999999999999999999999999999986532110 0
Q ss_pred hhhhc----c-cCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 176 IDQFT----S-DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 176 ~~~~~----~-~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.+... . .....|++++||++|.+|+++.++.+.+++++.
T Consensus 154 ~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 154 CRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 00000 1 113345679999999999999999999999885
No 35
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=6.8e-20 Score=146.70 Aligned_cols=182 Identities=13% Similarity=0.101 Sum_probs=127.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..++..|.. +|.++++|+||++.+..+ .....++...++.
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a~~ 144 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKP----------------------PGFSYTMETWAEL 144 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCC----------------------CCccccHHHHHHH
Confidence 47899999999999999999988864 799999999988654211 0012344555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCc-----ch------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFN-----AS------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~-----~~------------------ 174 (251)
+.++++. . ..+++.|+|||+||.+++.++.. +|++++++|++++..... ..
T Consensus 145 l~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 145 ILDFLEE---V--VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred HHHHHHH---h--cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 6666663 2 34689999999999999988874 799999999887532100 00
Q ss_pred -------hhhh------h---------------------------------------c----------ccCCCCCEEEEc
Q 025550 175 -------LIDQ------F---------------------------------------T----------SDAKKTPILWSH 192 (251)
Q Consensus 175 -------~~~~------~---------------------------------------~----------~~~~~~p~l~~~ 192 (251)
.... + . ..++++|+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~ 299 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLW 299 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEE
Confidence 0000 0 0 013678999999
Q ss_pred cCCCCcccchhc-ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 193 GMADRTVLFEAG-QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 193 g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|++|..++.+.. ....+.+.+.-.+.++++++++||....+..+.+.+.|.++|..
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999987632 12334454443457899999999998877777777666666653
No 36
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=4.9e-20 Score=141.21 Aligned_cols=170 Identities=16% Similarity=0.161 Sum_probs=119.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+...|.+ .|.++++|+||++.+.. + +..+..+.++.
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~----------~--------------~~~~~~~~~~~ 67 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRG----------F--------------GALSLADMAEA 67 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCC----------C--------------CCCCHHHHHHH
Confidence 35699999999999999999998874 59999999998765320 0 01122222222
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------h
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------S 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------~ 174 (251)
+. .. ..+++.++|||+||.+++.+|.++|+++++++++++...... .
T Consensus 68 l~-------~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK10349 68 VL-------QQ--APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQR 138 (256)
T ss_pred HH-------hc--CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHH
Confidence 22 12 346899999999999999999999999999998866311000 0
Q ss_pred hhhh------h-----------------------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 175 LIDQ------F-----------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 175 ~~~~------~-----------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
.... . ...++++|+++++|++|.+++.+.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 218 (256)
T PRK10349 139 TVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (256)
T ss_pred HHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHH
Confidence 0000 0 0013789999999999999987755444
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
.+.+ ...++++++++||....+..+.+.+-+.++-
T Consensus 219 ~~~i----~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 219 DKLW----PHSESYIFAKAAHAPFISHPAEFCHLLVALK 253 (256)
T ss_pred HHhC----CCCeEEEeCCCCCCccccCHHHHHHHHHHHh
Confidence 4443 3468999999999998887777776665553
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.84 E-value=1.2e-19 Score=137.76 Aligned_cols=175 Identities=19% Similarity=0.318 Sum_probs=124.3
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH-
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN- 118 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~- 118 (251)
|+||++||++++...|..+++.|. .|+.++.+|+|+++.+..+. .....+..+.+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~---------------------~~~~~~~~~~~~~~ 59 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPD---------------------EIERYDFEEAAQDI 59 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC---------------------ccChhhHHHHHHHH
Confidence 789999999999999999999998 89999999999875532110 1123445555555
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+..+++ . .+.+++.++|||+||.+++.++.++|+.+++++++++.......
T Consensus 60 ~~~~~~---~--~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T TIGR03695 60 LATLLD---Q--LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA 134 (251)
T ss_pred HHHHHH---H--cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH
Confidence 444333 2 24578999999999999999999999999999988764321100
Q ss_pred ----------------hhhhh---------------------------------cccCCCCCEEEEccCCCCcccchhcc
Q 025550 175 ----------------LIDQF---------------------------------TSDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 175 ----------------~~~~~---------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
..... .....++|+++++|++|..++ +
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~--- 210 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q--- 210 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H---
Confidence 00000 002367999999999998653 2
Q ss_pred cchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 206 AGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..+.+.+.....+++.++++||....+..+.+.+.+.+++
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 211 -IAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred -HHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 2344555445678999999999988777777777777665
No 38
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.84 E-value=3.7e-20 Score=140.38 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=120.5
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|. .++.++.+|+|+.+.+.. ....++.+.++.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~------------------------~~~~~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRG------------------------FGPLSLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCC------------------------CCCcCHHHHHHH
Confidence 3689999999999999999998886 569999999998755310 011223333333
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----c-h----------------hh
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----A-S----------------LI 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~-~----------------~~ 176 (251)
+... ..+++.++|||+||.+++.++.++|+.+++++++++..... . . ..
T Consensus 59 ~~~~---------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (245)
T TIGR01738 59 IAAQ---------APDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQ 129 (245)
T ss_pred HHHh---------CCCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHH
Confidence 3221 12589999999999999999999999999999886532110 0 0 00
Q ss_pred ---hh----------------------------------------h-------cccCCCCCEEEEccCCCCcccchhccc
Q 025550 177 ---DQ----------------------------------------F-------TSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 177 ---~~----------------------------------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
.. + ...++++|+++++|++|..++.+..+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~ 209 (245)
T TIGR01738 130 RTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY 209 (245)
T ss_pred HHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH
Confidence 00 0 002478999999999999999886655
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+.+.+. .++++.++++||....+..+.+.+-+.++
T Consensus 210 ~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 210 LDKLAP----HSELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred HHHhCC----CCeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 554443 46889999999998877777777766655
No 39
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=2.7e-19 Score=135.62 Aligned_cols=184 Identities=16% Similarity=0.169 Sum_probs=124.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.....+|++||+|.....|..-.+.|+. .+.++++|.|+.+.+ .+.-|+... .....
T Consensus 86 ~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~S---------SRP~F~~d~-------~~~e~---- 144 (365)
T KOG4409|consen 86 ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRS---------SRPKFSIDP-------TTAEK---- 144 (365)
T ss_pred cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCC---------CCCCCCCCc-------ccchH----
Confidence 336677899999999877776665555654 889999999976543 232222221 11111
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-h--------h-----
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-Q--------F----- 179 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-~--------~----- 179 (251)
+..+-++.+. ..++ +++.|+|||+||+++..+|++||++++.+|+++|+.-......+ . +
T Consensus 145 ---~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 145 ---EFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFL 219 (365)
T ss_pred ---HHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhh
Confidence 3333333332 4444 58999999999999999999999999999999997654422000 0 0
Q ss_pred -----c-------------------------------------------------------------------------c
Q 025550 180 -----T-------------------------------------------------------------------------S 181 (251)
Q Consensus 180 -----~-------------------------------------------------------------------------~ 181 (251)
+ .
T Consensus 220 ~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~ 299 (365)
T KOG4409|consen 220 VATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRE 299 (365)
T ss_pred hhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHh
Confidence 0 0
Q ss_pred cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
-+..+|+++++|++|-+ +...+....+.+. ...++.+++|++||.+..+..+.+.+-+.+.++
T Consensus 300 l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~--~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 300 LKKDVPVTFIYGDRDWM-DKNAGLEVTKSLM--KEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred hccCCCEEEEecCcccc-cchhHHHHHHHhh--cccceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 03569999999999964 4455555555542 235899999999999987777776666666554
No 40
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=1.4e-19 Score=141.52 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=122.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+++.|.+.+ .++++|+||++.+..+ ....+....+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~-----------------------~~~~~~~~~a~d 82 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKP-----------------------DIDYTFADHARY 82 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCC-----------------------CCCCCHHHHHHH
Confidence 3689999999999999999999888765 9999999988664211 111345555667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC------cch------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF------NAS------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~------~~~------------------ 174 (251)
+..+++. . +.+++.++|||+||.+++.++.++|+++++++++++.... ...
T Consensus 83 l~~ll~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 83 LDAWFDA---L--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHHH---h--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 7777663 2 3468999999999999999999999999999998863210 000
Q ss_pred -----hhh----h-------------h-----c---------------------------------ccCCCCCEEEEccC
Q 025550 175 -----LID----Q-------------F-----T---------------------------------SDAKKTPILWSHGM 194 (251)
Q Consensus 175 -----~~~----~-------------~-----~---------------------------------~~~~~~p~l~~~g~ 194 (251)
... . + . ...+++|+++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 000 0 0 0 01258899999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+|..++......+...+.. ..++++++++||....+..+.+.+-|.+++
T Consensus 238 ~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred CCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 9999955544333333222 368889999999987666555554444444
No 41
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.83 E-value=3.2e-19 Score=135.56 Aligned_cols=168 Identities=15% Similarity=0.217 Sum_probs=119.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.++ +|.++.+|+||++.+.. ....++.+.+++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~------------------------~~~~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAA------------------------ISVDGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCC------------------------ccccCHHHHHHH
Confidence 3679999999999999999999873 69999999998765310 011245666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCCCcch------------hh---------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVPFNAS------------LI--------- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~~~~~------------~~--------- 176 (251)
+.++++. . +.+++.++||||||.+++.++.++|+. +++++++++....... +.
T Consensus 56 l~~~l~~---~--~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (242)
T PRK11126 56 LSQTLQS---Y--NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLE 130 (242)
T ss_pred HHHHHHH---c--CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHH
Confidence 7777763 3 356899999999999999999998654 9999987654321100 00
Q ss_pred ----------------h--------hh-------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 177 ----------------D--------QF-------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 177 ----------------~--------~~-------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
. .. ...+.++|+++++|++|..+. .+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~ 205 (242)
T PRK11126 131 QVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----AL 205 (242)
T ss_pred HHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HH
Confidence 0 00 001368899999999998542 11
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ...+++.++++||.+..+..+.+.+.|.++++
T Consensus 206 ~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 206 AQQ-----LALPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred HHH-----hcCeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 221 14689999999999988777777777776664
No 42
>PRK10115 protease 2; Provisional
Probab=99.83 E-value=5.2e-19 Score=151.23 Aligned_cols=215 Identities=11% Similarity=0.084 Sum_probs=151.4
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..+.++..+..+++.++... .+.+.|+||++||+.+.. ..|......|.++|+.++...++|.+. -
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~---~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g---------~ 488 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHF---RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGE---------L 488 (686)
T ss_pred EECCCCCEEEEEEEEECCCC---CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCc---------c
Confidence 34567777777666543222 234669999999966544 346566667888999999999997633 2
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
++.|...... ..+..+..|+.+++++|.+ +.-+++++++++|.|.||.++..++.++|+.++++|+..|..
T Consensus 489 G~~w~~~g~~---~~k~~~~~D~~a~~~~Lv~------~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 489 GQQWYEDGKF---LKKKNTFNDYLDACDALLK------LGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred CHHHHHhhhh---hcCCCcHHHHHHHHHHHHH------cCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 3566553221 1223445555555554432 444689999999999999999999999999999999998866
Q ss_pred CCcchhh--------------------------hhhc----ccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 170 PFNASLI--------------------------DQFT----SDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 170 ~~~~~~~--------------------------~~~~----~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
+....+. ..++ ..+.+.| +|+++|.+|..|++.++.+++.+|++.+.+.
T Consensus 560 D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~ 639 (686)
T PRK10115 560 DVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDD 639 (686)
T ss_pred hHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCC
Confidence 5332100 0001 1235678 6778999999999999999999999999988
Q ss_pred EEEEe---CCCCCCCC------HHHHHHHHHHHHHhhc
Q 025550 219 EFKAY---PGLGHSIS------NEELRNLESWIKTRMS 247 (251)
Q Consensus 219 ~~~~~---~g~~H~~~------~~~~~~~~~~l~~~l~ 247 (251)
+++++ ++.||... .++......|+...+.
T Consensus 640 ~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 640 HLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred ceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhC
Confidence 88888 99999853 2234566778777765
No 43
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.82 E-value=4.5e-19 Score=136.64 Aligned_cols=181 Identities=14% Similarity=0.129 Sum_probs=130.1
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+++.|.|||+||++.+...|..++..|.+.||.++.+|+|+++.+... .....++.+.
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~----------------------~~~~~~~~~~ 72 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD----------------------ADSVTTFDEY 72 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC----------------------cccCCCHHHH
Confidence 345689999999999999999999999888999999999987542100 1111344455
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---------------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---------------------- 173 (251)
++.+.+.++. .. ..++++|+||||||.++..++.++|+.++++|.+++......
T Consensus 73 ~~~l~~~i~~---l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T PLN02211 73 NKPLIDFLSS---LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYE 148 (273)
T ss_pred HHHHHHHHHh---cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhcccee
Confidence 5666666663 22 246899999999999999999999999999998866432000
Q ss_pred ------------h--h----hhh-------------------------hcc-------cCC-CCCEEEEccCCCCcccch
Q 025550 174 ------------S--L----IDQ-------------------------FTS-------DAK-KTPILWSHGMADRTVLFE 202 (251)
Q Consensus 174 ------------~--~----~~~-------------------------~~~-------~~~-~~p~l~~~g~~D~~~~~~ 202 (251)
. . ... +.. ... .+|++++.|++|..+|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 149 LGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred eeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH
Confidence 0 0 000 000 012 679999999999999998
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+.+.+.+.. .+++.++ +||....+..+.+.+.|.+..+
T Consensus 229 ~~~~m~~~~~~----~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 229 QQEAMIKRWPP----SQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHhCCc----cEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 77666665543 3677787 6999988888888888877654
No 44
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.82 E-value=5.4e-19 Score=142.62 Aligned_cols=176 Identities=18% Similarity=0.199 Sum_probs=127.4
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.+.|||+||++++...|..+.+.|.. +|.++.+|+|+++.+.. .....++.+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~-----------------------~~~~~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSK-----------------------AVGAGSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCC-----------------------CCCCCCHHHHH
Confidence 3457899999999999999998888865 49999999998765310 01123344555
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc---h-------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---S------------------- 174 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---~------------------- 174 (251)
+.+..+++ . ++.++++++|||+||.+++.++..+|+.+++++++++...... .
T Consensus 185 ~~~~~~~~---~--~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T PRK14875 185 AAVLAFLD---A--LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLE 259 (371)
T ss_pred HHHHHHHH---h--cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHH
Confidence 55655555 2 3456899999999999999999999999999998876421100 0
Q ss_pred --------hhhh-------------------------h-----------cccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 175 --------LIDQ-------------------------F-----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 175 --------~~~~-------------------------~-----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
.... + ...+.++|+++++|++|..++.+.++.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~-- 337 (371)
T PRK14875 260 LLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP-- 337 (371)
T ss_pred HHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc--
Confidence 0000 0 01247899999999999999877554332
Q ss_pred HHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 211 LEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 211 l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
..+++..++++||....+..+.+.+.|.+++++
T Consensus 338 -----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 338 -----DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred -----CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 246888999999999888888888888887753
No 45
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=8.4e-19 Score=127.97 Aligned_cols=181 Identities=17% Similarity=0.158 Sum_probs=126.1
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...++++++||-..+......+...+ ..-++.++.+||.|.+.+.... . .....+|+..+
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p-----s--------------E~n~y~Di~av 118 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP-----S--------------ERNLYADIKAV 118 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc-----c--------------cccchhhHHHH
Confidence 35689999999754433221222222 2248899999999776542110 0 01123344444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------hhccc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-------------QFTSD 182 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-------------~~~~~ 182 (251)
.++|+. +.+ ..++|+|+|+|+|...++.+|++.| ++|+|+.+|.........+ .-...
T Consensus 119 ye~Lr~------~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~ 189 (258)
T KOG1552|consen 119 YEWLRN------RYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKIS 189 (258)
T ss_pred HHHHHh------hcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEeeccccccCcce
Confidence 444433 566 6789999999999999999999998 9999999997754332222 11123
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC---CHHHHHHHHHHHHHhhcC
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI---SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~---~~~~~~~~~~~l~~~l~~ 248 (251)
.+++|++++||++|++++..++.++++..++ +++.....|+||.- ..+.++.+.+|+....+.
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcccccCHHHHHHHHHHHHHhccc
Confidence 4889999999999999999999999999987 46777888999964 356678888888776553
No 46
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.82 E-value=3.8e-19 Score=145.00 Aligned_cols=181 Identities=14% Similarity=0.130 Sum_probs=124.9
Q ss_pred CccEEEEEecCCCCCCCchh-hhhhhc---CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGDSGPANEP-IKTLFT---SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~-~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..|.|||+||++++...|.. +...+. +.+|.++.+|+||++.++.+. ....++.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~----------------------~~~ytl~ 257 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA----------------------DSLYTLR 257 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC----------------------CCcCCHH
Confidence 35789999999999888875 334443 478999999999876542110 0112334
Q ss_pred HHHHHHH-HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------------
Q 025550 114 KAVRNVH-AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------- 173 (251)
Q Consensus 114 ~~~~~l~-~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------- 173 (251)
+.++.+. .+++ .. +.+++.++||||||.+++.++.++|+++++++++++......
T Consensus 258 ~~a~~l~~~ll~---~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (481)
T PLN03087 258 EHLEMIERSVLE---RY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVW 332 (481)
T ss_pred HHHHHHHHHHHH---Hc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccC
Confidence 4444552 3444 22 456899999999999999999999999999999875221000
Q ss_pred -----------------hh-----------hhh-------------h-----------c---------------c-----
Q 025550 174 -----------------SL-----------IDQ-------------F-----------T---------------S----- 181 (251)
Q Consensus 174 -----------------~~-----------~~~-------------~-----------~---------------~----- 181 (251)
.. ... . . .
T Consensus 333 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~ 412 (481)
T PLN03087 333 PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH 412 (481)
T ss_pred CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH
Confidence 00 000 0 0 0
Q ss_pred --cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HHHHHHHHHHHHhhcCC
Q 025550 182 --DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EELRNLESWIKTRMSCS 249 (251)
Q Consensus 182 --~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~~~ 249 (251)
..+++|+++++|++|..+|++.++.+.+.+. ..++++++++||.... +..+.+.+.|.++....
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 0367999999999999999997766666553 3689999999999663 66677777777766543
No 47
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.82 E-value=6.4e-19 Score=136.97 Aligned_cols=177 Identities=14% Similarity=0.124 Sum_probs=122.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++.+...|..+.+.|. .+|.++++|+|+.+.+..+. ....+.....+.
T Consensus 34 ~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~ 90 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPS----------------------GFGYQIDEHARV 90 (286)
T ss_pred CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCC----------------------ccccCHHHHHHH
Confidence 4789999999988778888888886 46999999999876542110 001223344445
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+.++++ .. +.+++.++|||+||.++..++..+|++++++|++++.......
T Consensus 91 ~~~~~~---~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T PRK03204 91 IGEFVD---HL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNF 165 (286)
T ss_pred HHHHHH---Hh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhH
Confidence 555444 22 3468999999999999999999999999999977653210000
Q ss_pred hhh---------hhc----------------------------c-----c---------CCCCCEEEEccCCCCcccchh
Q 025550 175 LID---------QFT----------------------------S-----D---------AKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 175 ~~~---------~~~----------------------------~-----~---------~~~~p~l~~~g~~D~~~~~~~ 203 (251)
... ... . . ..++|+++++|++|..+++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~ 245 (286)
T PRK03204 166 FVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKT 245 (286)
T ss_pred HHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHH
Confidence 000 000 0 0 017999999999999876542
Q ss_pred -cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 204 -GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 204 -~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+.+ ...++++++++||....+..+++.+.|.++|.
T Consensus 246 ~~~~~~~~i----p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 246 ILPRLRATF----PDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred HHHHHHHhc----CCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 33333333 34689999999999998888888888887763
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.82 E-value=1e-18 Score=138.15 Aligned_cols=200 Identities=17% Similarity=0.276 Sum_probs=127.8
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC-C---------------------c----hhhhhhhcCCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP-A---------------------N----EPIKTLFTSPEFK 68 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~-~---------------------~----~~~~~~~~~~g~~ 68 (251)
.++..+..|.+.+ ..++.+|+++||++++.. . | ..+++.|++.||.
T Consensus 5 ~~g~~l~~~~~~~--------~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 5 KDGLLLKTYSWIV--------KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred CCCCeEEEeeeec--------cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 4566677666652 145689999999998775 1 1 3578899999999
Q ss_pred eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHc------------------C
Q 025550 69 LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA------------------G 130 (251)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~------------------~ 130 (251)
++.+|.||++.+...... .....+..+.++++..+++...+. .
T Consensus 77 V~~~D~rGHG~S~~~~~~-------------------~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNL-------------------RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNT 137 (332)
T ss_pred EEEecccccCCCcccccc-------------------ccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 999999988764211000 001134445555555555543220 1
Q ss_pred CC-CCcEEEEEeChhHHHHHHHHHhcCC--------CcceEEEeccCCCCcc---------h-----hh-----------
Q 025550 131 ID-PNNVFVCGFSQGGALTLASVLLYPR--------KLGGGAIFSGWVPFNA---------S-----LI----------- 176 (251)
Q Consensus 131 ~~-~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~i~~~~~~~~~~---------~-----~~----------- 176 (251)
.. ..+++|+||||||.++..++..++. .++|+|+.+|.+.... . +.
T Consensus 138 ~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 217 (332)
T TIGR01607 138 KENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFR 217 (332)
T ss_pred ccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCccc
Confidence 11 3579999999999999988866532 5888887777531100 0 00
Q ss_pred --h--hhc--------------------------------------ccCC--CCCEEEEccCCCCcccchhcccchHHHH
Q 025550 177 --D--QFT--------------------------------------SDAK--KTPILWSHGMADRTVLFEAGQAGPPFLE 212 (251)
Q Consensus 177 --~--~~~--------------------------------------~~~~--~~p~l~~~g~~D~~~~~~~~~~~~~~l~ 212 (251)
. .+. .... ++|+++++|++|.+++++.++.+++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~ 297 (332)
T TIGR01607 218 ISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS 297 (332)
T ss_pred ccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc
Confidence 0 000 0112 6899999999999999887766655543
Q ss_pred hcCCeeEEEEeCCCCCCCCHH-----HHHHHHHHHH
Q 025550 213 QAGISCEFKAYPGLGHSISNE-----ELRNLESWIK 243 (251)
Q Consensus 213 ~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 243 (251)
. .+++++++++++|....+ ..+.+.+||.
T Consensus 298 ~--~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 I--SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred C--CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 3 247888999999988644 2455555553
No 49
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=2.4e-18 Score=134.64 Aligned_cols=183 Identities=19% Similarity=0.228 Sum_probs=128.3
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+...+.||++||++++...|+.+...+... |+.++++|++|.+.. ++.+ .....++.+
T Consensus 55 ~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~-----------s~~~----------~~~~y~~~~ 113 (326)
T KOG1454|consen 55 DKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYS-----------SPLP----------RGPLYTLRE 113 (326)
T ss_pred CCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcC-----------CCCC----------CCCceehhH
Confidence 357899999999999999999988866654 599999999975421 1100 112244555
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE---EeccCCCCcchh----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA---IFSGWVPFNASL---------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i---~~~~~~~~~~~~---------------- 175 (251)
.+..+..... ... .+++.++|||+||.+++.+|..+|+.+++++ .+++.....+..
T Consensus 114 ~v~~i~~~~~---~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (326)
T KOG1454|consen 114 LVELIRRFVK---EVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALE 188 (326)
T ss_pred HHHHHHHHHH---hhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhh
Confidence 5555555555 222 3459999999999999999999999999999 444422110000
Q ss_pred ----------------------------------------hh--------h------------------hcccCCCCCEE
Q 025550 176 ----------------------------------------ID--------Q------------------FTSDAKKTPIL 189 (251)
Q Consensus 176 ----------------------------------------~~--------~------------------~~~~~~~~p~l 189 (251)
.. . ......++|++
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvl 268 (326)
T KOG1454|consen 189 LLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVL 268 (326)
T ss_pred hcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceE
Confidence 00 0 00012459999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+++|+.|..+|.+.++.+.+++ ..+++++++++||....+..+.+.+.|..++++
T Consensus 269 ii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 269 IIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred EEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 9999999999999555554444 457999999999999887777777777777654
No 50
>PLN02578 hydrolase
Probab=99.81 E-value=1e-18 Score=139.75 Aligned_cols=174 Identities=17% Similarity=0.157 Sum_probs=122.9
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.||++||++++...|..+.+.|. .+|.++.+|+||++.+.. +....+.....+++
T Consensus 87 ~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~-----------------------~~~~~~~~~~a~~l 142 (354)
T PLN02578 87 LPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDK-----------------------ALIEYDAMVWRDQV 142 (354)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCC-----------------------cccccCHHHHHHHH
Confidence 568999999999999998888886 569999999998765311 11112333345566
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc----------------------chh--
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN----------------------ASL-- 175 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~----------------------~~~-- 175 (251)
.++++.+ ..++++++|||+||.+++.+|.++|+.+++++++++..... ...
T Consensus 143 ~~~i~~~-----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (354)
T PLN02578 143 ADFVKEV-----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKE 217 (354)
T ss_pred HHHHHHh-----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHH
Confidence 6666532 24689999999999999999999999999999876522100 000
Q ss_pred -------------------------------------------------------hh---h-h---c-------ccCCCC
Q 025550 176 -------------------------------------------------------ID---Q-F---T-------SDAKKT 186 (251)
Q Consensus 176 -------------------------------------------------------~~---~-~---~-------~~~~~~ 186 (251)
.. . + . ..+.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 297 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSC 297 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCC
Confidence 00 0 0 0 013689
Q ss_pred CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 187 PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
|+++++|++|..++.+.++.+.+.+. +.++++++ +||....+..+++.+-|.+++.
T Consensus 298 PvLiI~G~~D~~v~~~~~~~l~~~~p----~a~l~~i~-~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 298 PLLLLWGDLDPWVGPAKAEKIKAFYP----DTTLVNLQ-AGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEeC-CCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999887666555543 34677775 7999988887777777777664
No 51
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=1.3e-18 Score=131.52 Aligned_cols=184 Identities=17% Similarity=0.249 Sum_probs=135.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+....|+|+++||+..+..+|+.+...|+..||+++++|++|.+.+..+ .......+..
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P---------------------~~~~~Yt~~~ 98 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAP---------------------PHISEYTIDE 98 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCC---------------------CCcceeeHHH
Confidence 5567799999999999999999999999999999999999976553211 1224566777
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--hh-----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--SL----------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~~----------------- 175 (251)
.+.++..+++. .+ .+++.++||++|+.+|+.++..+|+++.+++.++....... ..
T Consensus 99 l~~di~~lld~---Lg--~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 99 LVGDIVALLDH---LG--LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQ 173 (322)
T ss_pred HHHHHHHHHHH---hc--cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecc
Confidence 78888888884 33 67999999999999999999999999999998876333000 00
Q ss_pred -------------------------------hh-----------------------------------h---------hc
Q 025550 176 -------------------------------ID-----------------------------------Q---------FT 180 (251)
Q Consensus 176 -------------------------------~~-----------------------------------~---------~~ 180 (251)
.. . ..
T Consensus 174 ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~ 253 (322)
T KOG4178|consen 174 EPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWA 253 (322)
T ss_pred ccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccc
Confidence 00 0 00
Q ss_pred ccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 181 SDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
...+..|+++++|+.|.+.+.. ....+.+.+.. ..+.++++|+||+...+..+++.+.+.++++
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~---l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR---LTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhcc---ccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 1136789999999999998876 22222222222 2468889999999998877777766666664
No 52
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.80 E-value=4.1e-18 Score=132.78 Aligned_cols=216 Identities=16% Similarity=0.175 Sum_probs=132.8
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC--CCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY--GAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--g~~~~~ 92 (251)
.++..+..|+..|. ....+.|+||.+||+++....+.... .++..|+.++.+|.+|.+........ +.....
T Consensus 64 ~~g~~V~g~l~~P~-----~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 64 FDGSRVYGWLYRPK-----NAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp GGGEEEEEEEEEES------SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred cCCCEEEEEEEecC-----CCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 35666777666532 23578899999999998866665543 36679999999999987732211111 111111
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|. .... ....+..-+...+.++...++.+. ...+|.++|++.|.|+||.+++.+|...+ ++++++...|++..
T Consensus 138 ~~-~~g~----~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 138 HI-TRGI----DDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp ST-TTTT----TS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HH-hcCc----cCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 11 1111 001233334445555555666555 56788999999999999999999999887 59999888886643
Q ss_pred cchhh-------------hhhc------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 172 NASLI-------------DQFT------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 172 ~~~~~-------------~~~~------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
..... ..+. ...+++|+++..|-.|.++|+...-+.++.+..
T Consensus 212 ~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~- 290 (320)
T PF05448_consen 212 FRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG- 290 (320)
T ss_dssp HHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-
T ss_pred hhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-
Confidence 22110 0000 235899999999999999999987777777755
Q ss_pred CCeeEEEEeCCCCCCCCHHH-HHHHHHHHHHh
Q 025550 215 GISCEFKAYPGLGHSISNEE-LRNLESWIKTR 245 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~ 245 (251)
++++.+||..+|....+. .++..+||.++
T Consensus 291 --~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 --PKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp --SEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred --CeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 689999999999998877 88899999874
No 53
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.80 E-value=2.5e-18 Score=137.46 Aligned_cols=180 Identities=13% Similarity=0.112 Sum_probs=131.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++.+...|+.++..|. .+|.++++|+|+++.+..+... .....++.+.++
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~-------------------~~~~ys~~~~a~ 185 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG-------------------YGFNYTLDEYVS 185 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc-------------------ccccCCHHHHHH
Confidence 45789999999999999999998886 4799999999988654211000 001235566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----ch-----------------h
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----AS-----------------L 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~~-----------------~ 175 (251)
++..+++. .+ .+++.|+|||+||.+++.++.++|++++++|++++..... .. .
T Consensus 186 ~l~~~i~~---l~--~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~ 260 (383)
T PLN03084 186 SLESLIDE---LK--SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPL 260 (383)
T ss_pred HHHHHHHH---hC--CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchH
Confidence 77777773 33 4589999999999999999999999999999998753210 00 0
Q ss_pred h----------------------------------------hhhcc---------------cCCCCCEEEEccCCCCccc
Q 025550 176 I----------------------------------------DQFTS---------------DAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 176 ~----------------------------------------~~~~~---------------~~~~~p~l~~~g~~D~~~~ 200 (251)
. ..+.. ..+++|+++++|+.|..++
T Consensus 261 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~ 340 (383)
T PLN03084 261 RASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN 340 (383)
T ss_pred HHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC
Confidence 0 00000 1247899999999999988
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.++.+.+.. +.++++++++||....+..+++.+.|.++++
T Consensus 341 ~~~~~~~a~~~-----~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 341 YDGVEDFCKSS-----QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHHhc-----CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 87554444432 4588999999999998888888888887764
No 54
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.80 E-value=3.1e-18 Score=133.02 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=118.2
Q ss_pred CccEEEEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+.+.||++||+.++... |..+...+.+.||.++.+|+|+++.+.... ......++...+
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~--------------------~~~~~~~~~~~~ 83 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPD--------------------DSDELWTIDYFV 83 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC--------------------cccccccHHHHH
Confidence 35789999997665544 445666676669999999999876532100 000013344555
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---------------------- 174 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---------------------- 174 (251)
+++..+++ .. +.++++++|||+||.+++.++..+|+.+++++++++.......
T Consensus 84 ~~~~~~~~---~~--~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (288)
T TIGR01250 84 DELEEVRE---KL--GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRC 158 (288)
T ss_pred HHHHHHHH---Hc--CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHH
Confidence 55555555 22 3457999999999999999999999999999987763221000
Q ss_pred -------------hhhh-h------------------------------------------------cccCCCCCEEEEc
Q 025550 175 -------------LIDQ-F------------------------------------------------TSDAKKTPILWSH 192 (251)
Q Consensus 175 -------------~~~~-~------------------------------------------------~~~~~~~p~l~~~ 192 (251)
.... . ...++++|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 238 (288)
T TIGR01250 159 EASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTV 238 (288)
T ss_pred HhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEe
Confidence 0000 0 0013679999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|.. +++..+.+.+.+. ..++++++++||....+..+++.+-+.+++
T Consensus 239 G~~D~~-~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 239 GEFDTM-TPEAAREMQELIA----GSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred cCCCcc-CHHHHHHHHHhcc----CCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 999985 4555444444332 357889999999988777777776666655
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.79 E-value=2.8e-18 Score=124.79 Aligned_cols=155 Identities=14% Similarity=0.181 Sum_probs=106.7
Q ss_pred cEEEEEecCCCCCCCchh--hhhhhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 40 NFILWLHGLGDSGPANEP--IKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
|.||++||++++...|.. +.+.+.+ .++.++.+|+|+.+ .+.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------------------------------~~~ 47 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------------------------------ADA 47 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------------------------------HHH
Confidence 679999999999998884 4556644 37888888887431 123
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------------- 176 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------------- 176 (251)
.+.+.++++ +. +.++++++|+|+||.+++.++.++|. + ++++++.........
T Consensus 48 ~~~l~~l~~---~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
T PRK11071 48 AELLESLVL---EH--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLES 119 (190)
T ss_pred HHHHHHHHH---Hc--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcH
Confidence 445555554 33 34689999999999999999999983 3 466766544211000
Q ss_pred ---hh---h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--HHHHHHHHHHH
Q 025550 177 ---DQ---F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--EELRNLESWIK 243 (251)
Q Consensus 177 ---~~---~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--~~~~~~~~~l~ 243 (251)
.. + .......|+++++|++|+++|++.+.++++. ++.++++|++|.+.. +..+.+.+|+.
T Consensus 120 ~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 120 RHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 00 0 0112567889999999999999988777773 256678999999864 33566777753
No 56
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.79 E-value=7.6e-18 Score=124.52 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=126.8
Q ss_pred EEecCCCCCCCCCCCCCc-cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCC
Q 025550 22 LFFWPSSSYSHEQNPMAR-NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100 (251)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~-~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~ 100 (251)
.|.+..|..+ .+++++ |+|+|+||.|..+.+.... ...|...++++.|.-+- + .--++|-...+.
T Consensus 175 kYrly~Pkdy--~pdkky~PLvlfLHgagq~g~dn~~~----l~sg~gaiawa~pedqc--f-----VlAPQy~~if~d- 240 (387)
T COG4099 175 KYRLYTPKDY--APDKKYYPLVLFLHGAGQGGSDNDKV----LSSGIGAIAWAGPEDQC--F-----VLAPQYNPIFAD- 240 (387)
T ss_pred eEEEeccccc--CCCCccccEEEEEecCCCCCchhhhh----hhcCccceeeecccCce--E-----EEcccccccccc-
Confidence 3444444444 355566 9999999999877765441 12344445555442210 0 000223221110
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc
Q 025550 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT 180 (251)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 180 (251)
.......-....++.+.+.+.. ++++|.+||.++|.|+||..++.++.++|+.+++.+.++|..+-.. ..
T Consensus 241 ---~e~~t~~~l~~~idli~~vlas--~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~-----lv 310 (387)
T COG4099 241 ---SEEKTLLYLIEKIDLILEVLAS--TYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY-----LV 310 (387)
T ss_pred ---cccccchhHHHHHHHHHHHHhh--ccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-----hh
Confidence 0011122223333333333332 7899999999999999999999999999999999999999765321 12
Q ss_pred ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC-------CCCCC-CC--HHHHHHHHHHHHH
Q 025550 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP-------GLGHS-IS--NEELRNLESWIKT 244 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------g~~H~-~~--~~~~~~~~~~l~~ 244 (251)
....+.|++++|+.+|+++|.++++-+++++++.+.++++..|. |..|. .+ .-...++.+||-+
T Consensus 311 ~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 311 RTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred hhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 23468999999999999999999999999999988877776665 22232 11 2234677788754
No 57
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=8.8e-18 Score=136.03 Aligned_cols=107 Identities=15% Similarity=0.076 Sum_probs=74.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH-HH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL-KA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~-~~ 115 (251)
...|.||++||++++...|......|.+ +|.++.+|+|+++.+... .+. ..+..+.. ..
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~---------~~~----------~~~~~~~~~~~ 162 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRP---------DFT----------CKSTEETEAWF 162 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCC---------Ccc----------cccHHHHHHHH
Confidence 4568999999999988888877777764 699999999987653110 000 00111111 12
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
++.+.++++ .. +.++++|+||||||.+++.++.++|+.++++|++++.
T Consensus 163 ~~~i~~~~~---~l--~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 163 IDSFEEWRK---AK--NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHHHHHHHH---Hc--CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 333333333 22 4468999999999999999999999999999988753
No 58
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.79 E-value=1e-17 Score=131.84 Aligned_cols=168 Identities=26% Similarity=0.346 Sum_probs=129.1
Q ss_pred CCCCccEEEEEecCCC---CCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
...+.|+||++||+|. +.... ......+...|+.++.+|||.+|+.+. +....
T Consensus 75 ~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----------------------p~~~~ 131 (312)
T COG0657 75 AAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----------------------PAALE 131 (312)
T ss_pred CCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----------------------CchHH
Confidence 4456899999999884 33333 335567888999999999999887522 44567
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchh--h--------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASL--I-------- 176 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~--~-------- 176 (251)
++.+++.++.+... +.++|+++|+++|+|.||.+++.++....+ ...+.+.++++.+..... .
T Consensus 132 d~~~a~~~l~~~~~---~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~ 208 (312)
T COG0657 132 DAYAAYRWLRANAA---ELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADL 208 (312)
T ss_pred HHHHHHHHHHhhhH---hhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccc
Confidence 77777777777666 678899999999999999999988877543 478888899987655300 0
Q ss_pred -----------hh------------hcc---c--CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 177 -----------DQ------------FTS---D--AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 177 -----------~~------------~~~---~--~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
.. ..+ . ..-.|+++++|+.|.+.+ +++.+.++|++.|++++++.++|+.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H 286 (312)
T COG0657 209 LDAAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH 286 (312)
T ss_pred cCHHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce
Confidence 00 000 0 115789999999999977 77899999999999999999999999
Q ss_pred CC
Q 025550 229 SI 230 (251)
Q Consensus 229 ~~ 230 (251)
.+
T Consensus 287 ~f 288 (312)
T COG0657 287 GF 288 (312)
T ss_pred ec
Confidence 87
No 59
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=5.3e-17 Score=125.33 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=119.0
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC----CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS----GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..++..+..++..| .+.+.+.||++||++.. ...+..+++.|+++||.++.+|+++++.+...
T Consensus 8 ~~~~~~l~g~~~~p-------~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~------ 74 (274)
T TIGR03100 8 SCEGETLVGVLHIP-------GASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE------ 74 (274)
T ss_pred EcCCcEEEEEEEcC-------CCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC------
Confidence 34556666666652 22234567777775532 22345578899999999999999988664210
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
. .......+++.+.++.+.+.....++++++|||+||.+++.++.. +..++++|+++++.
T Consensus 75 ----------------~---~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 75 ----------------N---LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred ----------------C---CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 0 112223344444444432221134679999999999999988765 45799999999975
Q ss_pred CCcch------------------hhhh---------------------h-cc-----------------cCCCCCEEEEc
Q 025550 170 PFNAS------------------LIDQ---------------------F-TS-----------------DAKKTPILWSH 192 (251)
Q Consensus 170 ~~~~~------------------~~~~---------------------~-~~-----------------~~~~~p~l~~~ 192 (251)
..... .... . .. ...++|+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~ 214 (274)
T TIGR03100 135 RTEAAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFIL 214 (274)
T ss_pred CCcccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEE
Confidence 42210 0000 0 00 13678999999
Q ss_pred cCCCCcccchh-----cccchHHHHhcCCeeEEEEeCCCCCCCCHH-HHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEA-----GQAGPPFLEQAGISCEFKAYPGLGHSISNE-ELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-~~~~~~~~l~~~l 246 (251)
|+.|...+.-. +..+.+.+.. ..+++..+++++|.++.+ ..+.+.+-|.++|
T Consensus 215 g~~D~~~~~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL 272 (274)
T TIGR03100 215 SGNDLTAQEFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAARTTEWL 272 (274)
T ss_pred cCcchhHHHHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHHHHHH
Confidence 99998753211 0222222221 357899999999988543 3344444444444
No 60
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.78 E-value=1.9e-17 Score=130.05 Aligned_cols=177 Identities=18% Similarity=0.208 Sum_probs=118.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.||++||+.++... ..+...+...+|.++.+|+|+++.+.... ........+.+++
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~d 84 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHA---------------------CLEENTTWDLVAD 84 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCCCCCC---------------------CcccCCHHHHHHH
Confidence 4568999998776544 33444565678999999999876542110 0001123334455
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC---------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF--------------------------- 171 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~--------------------------- 171 (251)
+..+++ .. +.+++.++||||||.+++.++.++|+.++++|+++.....
T Consensus 85 l~~l~~---~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 85 IEKLRE---KL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHH---Hc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 555444 22 3458999999999999999999999999988877542210
Q ss_pred --cchh-----------------------------hh------------------------hh----------cc-----
Q 025550 172 --NASL-----------------------------ID------------------------QF----------TS----- 181 (251)
Q Consensus 172 --~~~~-----------------------------~~------------------------~~----------~~----- 181 (251)
.... .. .+ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 0000 00 00 00
Q ss_pred ----cCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhh
Q 025550 182 ----DAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTRM 246 (251)
Q Consensus 182 ----~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 246 (251)
.+. ++|+++++|++|.++|.+.++.+.+.+. ..++++++++||... .+..+.+.+|+.++|
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 112 5899999999999999987766666553 358889999999876 456788999998765
No 61
>PLN02511 hydrolase
Probab=99.78 E-value=2.2e-17 Score=133.16 Aligned_cols=185 Identities=13% Similarity=0.182 Sum_probs=118.6
Q ss_pred CCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...|+||++||++++... | ..++..+.+.||.++++|+||++.++... ..++. ...
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~------~~~~~----------~~~------ 155 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT------PQFYS----------ASF------ 155 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC------cCEEc----------CCc------
Confidence 456899999999776544 4 34666667799999999999987653211 00100 011
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC--cceEEEeccCCCCc-------ch--------hh-
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFN-------AS--------LI- 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~i~~~~~~~~~-------~~--------~~- 176 (251)
.+++.++++.+.. ..+..+++++|||+||.+++.++.++|+. +.+++++++..... .. +.
T Consensus 156 -~~Dl~~~i~~l~~-~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~ 233 (388)
T PLN02511 156 -TGDLRQVVDHVAG-RYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAK 233 (388)
T ss_pred -hHHHHHHHHHHHH-HCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHH
Confidence 2333344433321 12346899999999999999999999876 77777776543210 00 00
Q ss_pred -------------h----hh---------------------------------------cccCCCCCEEEEccCCCCccc
Q 025550 177 -------------D----QF---------------------------------------TSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 177 -------------~----~~---------------------------------------~~~~~~~p~l~~~g~~D~~~~ 200 (251)
. .+ ...++++|+++++|++|++++
T Consensus 234 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p 313 (388)
T PLN02511 234 ALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAP 313 (388)
T ss_pred HHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCC
Confidence 0 00 001478999999999999998
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----------HHHHHHHHHHhhcC
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----------LRNLESWIKTRMSC 248 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----------~~~~~~~l~~~l~~ 248 (251)
.+... ..+.+.....++++++++||..+.+. .+.+.+||......
T Consensus 314 ~~~~~---~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 314 ARGIP---REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred cccCc---HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 76431 22223334588999999999755332 36677888776653
No 62
>PRK06489 hypothetical protein; Provisional
Probab=99.77 E-value=1.7e-17 Score=133.15 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=117.4
Q ss_pred ccEEEEEecCCCCCCCch--hhhhhh-------cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 39 RNFILWLHGLGDSGPANE--PIKTLF-------TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~--~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
.|.|||+||++++...|. .+.+.+ ...+|.++.+|+||++.+...... ..+ ....
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~----~~~------------~~~~ 132 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG----LRA------------AFPR 132 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC----CCC------------CCCc
Confidence 578999999999877775 444332 257899999999988764211100 000 0001
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc----------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN---------------- 172 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~---------------- 172 (251)
.++.+.++++...+.. .. +.+++. |+||||||.+++.++.++|++++++|++++.....
T Consensus 133 ~~~~~~a~~~~~~l~~--~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~ 208 (360)
T PRK06489 133 YDYDDMVEAQYRLVTE--GL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIR 208 (360)
T ss_pred ccHHHHHHHHHHHHHH--hc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHH
Confidence 2344445555443321 23 345664 89999999999999999999999999887532000
Q ss_pred --------c------h------hh--------------hh--------h-------c----------------------c
Q 025550 173 --------A------S------LI--------------DQ--------F-------T----------------------S 181 (251)
Q Consensus 173 --------~------~------~~--------------~~--------~-------~----------------------~ 181 (251)
. . .. .. + . .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L 288 (360)
T PRK06489 209 NDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDL 288 (360)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHH
Confidence 0 0 00 00 0 0 0
Q ss_pred cCCCCCEEEEccCCCCcccchhc--ccchHHHHhcCCeeEEEEeCCC----CCCCCHHHHHHHHHHHHHhhc
Q 025550 182 DAKKTPILWSHGMADRTVLFEAG--QAGPPFLEQAGISCEFKAYPGL----GHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.++++|+++++|++|..++.+.+ +.+.+.+. +.++++++++ ||... +..+.+.+-|.++|.
T Consensus 289 ~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 289 EKIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred HhCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 14789999999999999987754 34444443 3589999985 99886 566666666665554
No 63
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.76 E-value=4.7e-17 Score=130.15 Aligned_cols=194 Identities=15% Similarity=0.143 Sum_probs=129.0
Q ss_pred CccEEEEEecCCCCCC-----------Cchhhh---hhhcCCCcceEEEEccC--CCCCCcccCCCCcCCccccccCCCC
Q 025550 38 ARNFILWLHGLGDSGP-----------ANEPIK---TLFTSPEFKLTKWSFPS--APNNPVTCNYGAVMPSWFDIHEIPV 101 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-----------~~~~~~---~~~~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~w~~~~~~~~ 101 (251)
..+.||++||++++.. .|..++ ..+...+|.++++|+|| ++.+..+.. ......|..
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~-~~~~~~~~~------ 102 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI-NPGGRPYGS------ 102 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC-CCCCCcCCC------
Confidence 3478999999998652 355554 36667899999999998 332210000 000011100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------
Q 025550 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------ 174 (251)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------ 174 (251)
......+.+.++++..+++ ..++ ++ +.++||||||.+++.++.++|+.++++|++++.......
T Consensus 103 ----~~~~~~~~~~~~~~~~~~~---~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 103 ----DFPLITIRDDVKAQKLLLD---HLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred ----CCCCCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 0112455666667766666 3443 56 999999999999999999999999999988764311000
Q ss_pred --------------------------h----------------------------------------hhhh---------
Q 025550 175 --------------------------L----------------------------------------IDQF--------- 179 (251)
Q Consensus 175 --------------------------~----------------------------------------~~~~--------- 179 (251)
. ...+
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 0 0000
Q ss_pred ---------------c--------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE-eCCCCCC
Q 025550 180 ---------------T--------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA-YPGLGHS 229 (251)
Q Consensus 180 ---------------~--------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~~H~ 229 (251)
. ...+++|+++++|++|.+++++.++.+.+.+......+++++ ++++||.
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~ 333 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHD 333 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcc
Confidence 0 013578999999999999999998888888877544444444 4689999
Q ss_pred CCHHHHHHHHHHHHHhhc
Q 025550 230 ISNEELRNLESWIKTRMS 247 (251)
Q Consensus 230 ~~~~~~~~~~~~l~~~l~ 247 (251)
...+..+.+.+.|.++|+
T Consensus 334 ~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 334 AFLVETDQVEELIRGFLR 351 (351)
T ss_pred hhhcCHHHHHHHHHHHhC
Confidence 988888888887777763
No 64
>PRK10985 putative hydrolase; Provisional
Probab=99.76 E-value=5.8e-17 Score=128.11 Aligned_cols=183 Identities=15% Similarity=0.144 Sum_probs=114.3
Q ss_pred CCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.|+||++||++++... ...+++.+.++||.++++|+|+++..+...... +. .....|+..
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~------~~----------~~~~~D~~~ 119 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRI------YH----------SGETEDARF 119 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcce------EC----------CCchHHHHH
Confidence 457899999999876543 344788899999999999999876432111000 00 011233333
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC--cceEEEeccCCCCcch----------hhh-----
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFNAS----------LID----- 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~i~~~~~~~~~~~----------~~~----- 177 (251)
.++.+.+ + .+..+++++||||||.++..++..+++. +.+++++++....... ...
T Consensus 120 ~i~~l~~------~--~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 120 FLRWLQR------E--FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred HHHHHHH------h--CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 3333321 2 2346899999999999888777776543 7888888775431100 000
Q ss_pred ----------------------hhc----------------------------------ccCCCCCEEEEccCCCCcccc
Q 025550 178 ----------------------QFT----------------------------------SDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 178 ----------------------~~~----------------------------------~~~~~~p~l~~~g~~D~~~~~ 201 (251)
... ..++++|+++++|++|.+++.
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 192 LLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCCh
Confidence 000 024688999999999999887
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHH--------H-HHHHHHHHHHhhc
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNE--------E-LRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--------~-~~~~~~~l~~~l~ 247 (251)
+....+ .+.....++.+++++||....+ . -+.+.+|+...+.
T Consensus 272 ~~~~~~----~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKP----ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHH----HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 654433 2333357888999999964322 1 3557778776653
No 65
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.76 E-value=1.7e-17 Score=132.27 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=118.3
Q ss_pred ccEEEEEecCCCCCC------------Cchhhhh---hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC
Q 025550 39 RNFILWLHGLGDSGP------------ANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA 103 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~------------~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~ 103 (251)
.| +|++||+.++.. .|..+.. .|...+|.++.+|+||++.+.
T Consensus 58 ~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~---------------------- 114 (343)
T PRK08775 58 AP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL---------------------- 114 (343)
T ss_pred CC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC----------------------
Confidence 35 555655555444 5777765 464568999999999764321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------
Q 025550 104 SSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---------- 173 (251)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---------- 173 (251)
. ......+.++++.++++ ..+++ +.+.|+||||||.+++.++.++|++++++|++++......
T Consensus 115 --~-~~~~~~~~a~dl~~ll~---~l~l~-~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~ 187 (343)
T PRK08775 115 --D-VPIDTADQADAIALLLD---ALGIA-RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQR 187 (343)
T ss_pred --C-CCCCHHHHHHHHHHHHH---HcCCC-cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHH
Confidence 0 01123445666777776 33332 2357999999999999999999999999998875321000
Q ss_pred ----------------h-------------------hhhh----------------------------------------
Q 025550 174 ----------------S-------------------LIDQ---------------------------------------- 178 (251)
Q Consensus 174 ----------------~-------------------~~~~---------------------------------------- 178 (251)
. +...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T PRK08775 188 RAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID 267 (343)
T ss_pred HHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh
Confidence 0 0000
Q ss_pred h---cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC-CCCCCCHHHHHHHHHHHHHhhcC
Q 025550 179 F---TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG-LGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 179 ~---~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
. ...++++|+++++|+.|.+++.+.++.+.+.+. ...+++++++ +||....+..+.+.+-|.++|..
T Consensus 268 ~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 268 LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 0 002367899999999999999886655555442 2468889985 89999888877777777777753
No 66
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.76 E-value=3.3e-18 Score=127.27 Aligned_cols=162 Identities=26% Similarity=0.388 Sum_probs=111.8
Q ss_pred EEEEecCCCC---CCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 42 ILWLHGLGDS---GPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 42 vv~~HG~~~~---~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
||++||+|.. ......++..++ +.|+.++.++||.+|+.+. +...+|+.++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~-----------------------p~~~~D~~~a~~ 57 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPF-----------------------PAALEDVKAAYR 57 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSST-----------------------THHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccc-----------------------ccccccccccee
Confidence 7999998853 334444555555 4899999999998876321 334455555666
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCC-cc--hhh-------h--h---
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPF-NA--SLI-------D--Q--- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~-~~--~~~-------~--~--- 178 (251)
++.+..+ +.+++.++|+|+|+|.||.+++.++....+ .++++++++|+.+. .. ... + .
T Consensus 58 ~l~~~~~---~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~ 134 (211)
T PF07859_consen 58 WLLKNAD---KLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPA 134 (211)
T ss_dssp HHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBH
T ss_pred eeccccc---cccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccc
Confidence 6555444 567889999999999999999999876433 38999999998654 11 100 0 0
Q ss_pred --------------------hc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 --------------------FT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 --------------------~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.. ....-.|+++++|+.|.++ +++..++++|++.|+++++++++|..|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 135 PKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 00 0112459999999999875 477899999999999999999999999874
No 67
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=6.7e-17 Score=138.91 Aligned_cols=223 Identities=19% Similarity=0.236 Sum_probs=151.1
Q ss_pred cceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh----hhh-hhcCCCcceEEEEccCCCC
Q 025550 5 KPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP----IKT-LFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~----~~~-~~~~~g~~~~~~~~~~~~~ 79 (251)
.|...+..+..++.......+.|+... ..++.|+++.+||+.++...... +.. .+...|+.++.+|.+|.+.
T Consensus 495 ~p~~~~~~i~~~~~~~~~~~~lP~~~~---~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 495 LPIVEFGKIEIDGITANAILILPPNFD---PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGG 571 (755)
T ss_pred CCcceeEEEEeccEEEEEEEecCCCCC---CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCC
Confidence 344555555556666555445544433 55589999999998874332221 233 4678899999999997654
Q ss_pred CCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC-CC
Q 025550 80 NPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP-RK 158 (251)
Q Consensus 80 ~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~~ 158 (251)
. |...+.+.. ..-...++.+....++.+++ ...+|.+||+|+|+|.||++++.++...| +.
T Consensus 572 ~------G~~~~~~~~---------~~lG~~ev~D~~~~~~~~~~---~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~ 633 (755)
T KOG2100|consen 572 Y------GWDFRSALP---------RNLGDVEVKDQIEAVKKVLK---LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDV 633 (755)
T ss_pred c------chhHHHHhh---------hhcCCcchHHHHHHHHHHHh---cccccHHHeEEeccChHHHHHHHHhhhCcCce
Confidence 2 221111110 11122344444444544444 45689999999999999999999999997 66
Q ss_pred cceEEEeccCCCCcch---hhhh------------------hcccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 159 LGGGAIFSGWVPFNAS---LIDQ------------------FTSDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 159 ~~~~i~~~~~~~~~~~---~~~~------------------~~~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
+++.++++|..+.... ..++ ......+.| .|++||+.|..|+.+++..+.+.|+..|+
T Consensus 634 fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv 713 (755)
T KOG2100|consen 634 FKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV 713 (755)
T ss_pred EEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC
Confidence 8888999995543200 0000 011224444 59999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCCH-----HHHHHHHHHHHHhhcC
Q 025550 217 SCEFKAYPGLGHSISN-----EELRNLESWIKTRMSC 248 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~~-----~~~~~~~~~l~~~l~~ 248 (251)
+++..+||+.+|.+.. .....+..|+...+..
T Consensus 714 ~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 714 PFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 9999999999999863 3368888999876653
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.76 E-value=8.3e-18 Score=118.92 Aligned_cols=205 Identities=12% Similarity=0.172 Sum_probs=147.3
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
..-.....+...++.|.+. .+..+|+++++|+-.++-....++++ .....+..++.++|+|.+.+..+
T Consensus 55 e~i~l~T~D~vtL~a~~~~--------~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs--- 123 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLML--------SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGS--- 123 (300)
T ss_pred eEEEEEcCcceeEeeeeec--------ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCC---
Confidence 3344556677888888886 33488999999998887777777666 55667889999999987664211
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
...+.+.-.. +++++.+. +...+..++++.|-|.||.+|..+|+.+.+++.+++.-
T Consensus 124 --------------------psE~GL~lDs---~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 124 --------------------PSEEGLKLDS---EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred --------------------ccccceeccH---HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 1111211111 22222222 56678889999999999999999999999999999987
Q ss_pred ccCCCCcchhhhh---------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 166 SGWVPFNASLIDQ---------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 166 ~~~~~~~~~~~~~---------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
..+.......... -.....++|+|++.|..|.++|+-..+++++...+. ..++.+||
T Consensus 181 NTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP 258 (300)
T KOG4391|consen 181 NTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFP 258 (300)
T ss_pred chhccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCC
Confidence 7665542221110 011247899999999999999999988888877664 46899999
Q ss_pred CCCCCCC---HHHHHHHHHHHHHhhcC
Q 025550 225 GLGHSIS---NEELRNLESWIKTRMSC 248 (251)
Q Consensus 225 g~~H~~~---~~~~~~~~~~l~~~l~~ 248 (251)
++.|.-+ .-.++.+.+|+.+...+
T Consensus 259 ~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 259 DGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CCccCceEEeccHHHHHHHHHHHhccC
Confidence 9999643 44578899999887764
No 69
>PRK07581 hypothetical protein; Validated
Probab=99.75 E-value=3.2e-17 Score=130.66 Aligned_cols=114 Identities=17% Similarity=0.209 Sum_probs=70.3
Q ss_pred CccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..|+||++||++++...|..+. +.+...+|.++++|+||++.+..+...+ ..+ ... ......+.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~---~~~-~~~--------~~~~~~~~~ 107 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTP---APF-NAA--------RFPHVTIYD 107 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCC---CCC-CCC--------CCCceeHHH
Confidence 4477888888887766665432 3566678999999999987643211000 000 000 001112333
Q ss_pred HHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
.+......+.. ..+ .++ ..|+||||||.+++.+|.++|++++++|++++
T Consensus 108 ~~~~~~~~l~~--~lg--i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 108 NVRAQHRLLTE--KFG--IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHHHHHHHHHH--HhC--CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 33332222211 233 457 47999999999999999999999999998854
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.75 E-value=3.6e-17 Score=115.57 Aligned_cols=167 Identities=15% Similarity=0.235 Sum_probs=123.4
Q ss_pred CCccEEEEEecCCCCCCCc--hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPAN--EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
....++|++||+-+++..- ..++..+++.|+.++++||++.+++..+..+|... ..
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~----------------~e------ 88 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN----------------TE------ 88 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc----------------ch------
Confidence 4567999999998887663 33788999999999999999988876655555311 11
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc--------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT-------------- 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~-------------- 180 (251)
+++|..+++... +...---+++|||-||-+++.++.++.+ +..++.++|.........+++.
T Consensus 89 -adDL~sV~q~~s--~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid 164 (269)
T KOG4667|consen 89 -ADDLHSVIQYFS--NSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFID 164 (269)
T ss_pred -HHHHHHHHHHhc--cCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCcee
Confidence 255555555432 1122223699999999999999999986 8888988886554333211111
Q ss_pred ------------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 181 ------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 181 ------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.....||+|-+||..|.+||.+++.++++.+.. .++++++|++|.+
T Consensus 165 ~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHny 240 (269)
T KOG4667|consen 165 VGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNY 240 (269)
T ss_pred cCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCc
Confidence 124789999999999999999999988888876 5899999999998
Q ss_pred CHH
Q 025550 231 SNE 233 (251)
Q Consensus 231 ~~~ 233 (251)
...
T Consensus 241 t~~ 243 (269)
T KOG4667|consen 241 TGH 243 (269)
T ss_pred cch
Confidence 743
No 71
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.75 E-value=1.1e-16 Score=129.02 Aligned_cols=195 Identities=13% Similarity=0.101 Sum_probs=129.6
Q ss_pred CccEEEEEecCCCCCCC-------------chhhhh---hhcCCCcceEEEEccCC-CCCCccc-CCCCcCCccccccCC
Q 025550 38 ARNFILWLHGLGDSGPA-------------NEPIKT---LFTSPEFKLTKWSFPSA-PNNPVTC-NYGAVMPSWFDIHEI 99 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-------------~~~~~~---~~~~~g~~~~~~~~~~~-~~~~~~~-~~g~~~~~w~~~~~~ 99 (251)
..|.||++||++++... |..++. .+...+|.++++|++++ +.+.... ........|.
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~----- 121 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYG----- 121 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCccc-----
Confidence 35899999999998874 445442 34457999999999973 2110000 0000000000
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---- 174 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---- 174 (251)
......++.+.++++.++++. .+ .++ +.++||||||.+++.++.++|++++++|++++.......
T Consensus 122 -----~~~~~~~~~~~~~~~~~~l~~---l~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 191 (379)
T PRK00175 122 -----SDFPVITIRDWVRAQARLLDA---LG--ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAF 191 (379)
T ss_pred -----CCCCcCCHHHHHHHHHHHHHH---hC--CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHH
Confidence 000134566667777777773 34 346 589999999999999999999999999988764321000
Q ss_pred --------------------------------------------------h------------------hhhh-------
Q 025550 175 --------------------------------------------------L------------------IDQF------- 179 (251)
Q Consensus 175 --------------------------------------------------~------------------~~~~------- 179 (251)
+ ...+
T Consensus 192 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 271 (379)
T PRK00175 192 NEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDK 271 (379)
T ss_pred HHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHH
Confidence 0 0000
Q ss_pred --------------------c------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC-CC
Q 025550 180 --------------------T------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP-GL 226 (251)
Q Consensus 180 --------------------~------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~-g~ 226 (251)
. ...+++|+++++|++|.+++++.++.+.+.+...+..+++.+++ ++
T Consensus 272 ~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~ 351 (379)
T PRK00175 272 FVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPY 351 (379)
T ss_pred HhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 0 01367899999999999999999998999998876667888775 89
Q ss_pred CCCCCHHHHHHHHHHHHHhhc
Q 025550 227 GHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l~~~l~ 247 (251)
||....+..+.+.+-|.++|+
T Consensus 352 GH~~~le~p~~~~~~L~~FL~ 372 (379)
T PRK00175 352 GHDAFLLDDPRYGRLVRAFLE 372 (379)
T ss_pred CchhHhcCHHHHHHHHHHHHH
Confidence 999887776666666666554
No 72
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.75 E-value=4e-17 Score=119.78 Aligned_cols=160 Identities=23% Similarity=0.252 Sum_probs=101.5
Q ss_pred CCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.|+||++||.+++..++.. +.+.-.+.||.+ .||..... ........|++... .... .+
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~Gfiv---vyP~~~~~----~~~~~cw~w~~~~~----~~g~---~d-- 77 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIV---VYPEQSRR----ANPQGCWNWFSDDQ----QRGG---GD-- 77 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEE---Eccccccc----CCCCCccccccccc----ccCc---cc--
Confidence 367999999999998877655 223334456644 45543221 01122234544111 1111 11
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-hhh---hh----------
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-SLI---DQ---------- 178 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-~~~---~~---------- 178 (251)
...|..+++.+. +..+|++||.+.|+|.||.++..++..+|+.|+++..++|...... ... ..
T Consensus 78 --~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~ 155 (220)
T PF10503_consen 78 --VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPA 155 (220)
T ss_pred --hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChH
Confidence 222333333333 7889999999999999999999999999999999998887432100 000 00
Q ss_pred -----h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 179 -----F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 179 -----~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
. .......|++++||+.|.+|.+.+.+++.+.+...
T Consensus 156 ~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 156 AAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 0 00123469999999999999999888888877664
No 73
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.73 E-value=2.1e-16 Score=124.45 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=124.7
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhh-hhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPI-KTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.....+.-.+..+..|+.-| +.+++.|+||++-|..+...++..+ .+.+...|++++++|.|+-+.++
T Consensus 165 i~~v~iP~eg~~I~g~LhlP------~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~----- 233 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLP------SGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP----- 233 (411)
T ss_dssp EEEEEEEETTCEEEEEEEES------SSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-----
T ss_pred cEEEEEeeCCcEEEEEEEcC------CCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-----
Confidence 33444555567777776543 2457889999999998888887665 45788999999999999764421
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
.|.- ..+... ....+.+.+.. ...+|.+||+++|.|+||+++..+|...+++++++|+.+
T Consensus 234 -----~~~l----------~~D~~~---l~~aVLd~L~~--~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~G 293 (411)
T PF06500_consen 234 -----KWPL----------TQDSSR---LHQAVLDYLAS--RPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALG 293 (411)
T ss_dssp -----TT-S-----------S-CCH---HHHHHHHHHHH--STTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES
T ss_pred -----cCCC----------CcCHHH---HHHHHHHHHhc--CCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeC
Confidence 1210 112222 22233333332 567899999999999999999999998888999999999
Q ss_pred cCCCCcch-----------hh---------------------hh--------hcccCCCCCEEEEccCCCCcccchhccc
Q 025550 167 GWVPFNAS-----------LI---------------------DQ--------FTSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 167 ~~~~~~~~-----------~~---------------------~~--------~~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
+.....-. .. .. +...+..+|+|.+.+++|++.|.++.+
T Consensus 294 a~vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~- 372 (411)
T PF06500_consen 294 APVHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSR- 372 (411)
T ss_dssp ---SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHH-
T ss_pred chHhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHH-
Confidence 85321100 00 00 002346789999999999999987543
Q ss_pred chHHHHhcCCeeEEEEeCCCC-CCCCHHHHHHHHHHHHHhh
Q 025550 207 GPPFLEQAGISCEFKAYPGLG-HSISNEELRNLESWIKTRM 246 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~-H~~~~~~~~~~~~~l~~~l 246 (251)
.+...+.+-+...++... |.-.......+.+||++.|
T Consensus 373 ---lia~~s~~gk~~~~~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 373 ---LIAESSTDGKALRIPSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp ---HHHHTBTT-EEEEE-SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCceeecCCCccccchHHHHHHHHHHHHHhc
Confidence 344444444566666434 7666788999999999876
No 74
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.73 E-value=1.3e-16 Score=147.67 Aligned_cols=188 Identities=18% Similarity=0.244 Sum_probs=126.2
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+...|. .+|.++.+|+|+++.+...... .+ .......++....+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~-----~~----------~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHA-----KE----------TQTEPTLSVELVAD 1433 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCcccc-----cc----------ccccccCCHHHHHH
Confidence 45789999999999999999988886 4699999999988654211000 00 00011223445555
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS----------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~----------------------- 174 (251)
.+..+++. . +.+++.|+||||||.+++.++.++|+.+++++++++.......
T Consensus 1434 ~l~~ll~~---l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1434 LLYKLIEH---I--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHH---h--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 66666552 2 3568999999999999999999999999999988763211000
Q ss_pred -h---------hhh----------h-------------------c----------ccCCCCCEEEEccCCCCcccchhcc
Q 025550 175 -L---------IDQ----------F-------------------T----------SDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 175 -~---------~~~----------~-------------------~----------~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
+ ... . . -.++++|+++++|++|..++ +.+.
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~ 1587 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQ 1587 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHH
Confidence 0 000 0 0 01367899999999998775 4445
Q ss_pred cchHHHHhcC--------CeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 206 AGPPFLEQAG--------ISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 206 ~~~~~l~~~~--------~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+.+.. ..+++++++++||....+..+.+.+-|.++|.
T Consensus 1588 ~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1588 KMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred HHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 5555554320 12589999999999987776666666655554
No 75
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.73 E-value=8.8e-16 Score=119.31 Aligned_cols=181 Identities=20% Similarity=0.228 Sum_probs=130.9
Q ss_pred CCccEEEEEecCCC---C--CCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 37 MARNFILWLHGLGD---S--GPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~--~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.+.|+|||+||+|. + ...|..+...+ .+.+..++.+|||.+|+++.+. ..+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa-----------------------~y~ 144 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA-----------------------AYD 144 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-----------------------cch
Confidence 68899999999883 2 33455555544 6678999999999999976443 345
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcchhhhh------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNASLIDQ------ 178 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~~~~~~------ 178 (251)
|..+++.++.+.. +.+.+.|.+|++|+|-|.||.+|..++.+. +..+++.|++.|++.........
T Consensus 145 D~~~Al~w~~~~~--~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~ 222 (336)
T KOG1515|consen 145 DGWAALKWVLKNS--WLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN 222 (336)
T ss_pred HHHHHHHHHHHhH--HHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc
Confidence 6666666665532 337888999999999999999999888763 34689999999966533221110
Q ss_pred --------------------------------hc-c------cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeE
Q 025550 179 --------------------------------FT-S------DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 179 --------------------------------~~-~------~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
.. . .....|++++.++.|.+. +++..+.++|++.|++++
T Consensus 223 ~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~ 300 (336)
T KOG1515|consen 223 GSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVT 300 (336)
T ss_pred CCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEE
Confidence 00 0 113356999999999875 577789999999999999
Q ss_pred EEEeCCCCCCCC---H------HHHHHHHHHHHH
Q 025550 220 FKAYPGLGHSIS---N------EELRNLESWIKT 244 (251)
Q Consensus 220 ~~~~~g~~H~~~---~------~~~~~~~~~l~~ 244 (251)
+..++++.|.+. . +..+.+.+|+.+
T Consensus 301 ~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 301 LIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred EEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 999999999753 1 225666677654
No 76
>PLN00021 chlorophyllase
Probab=99.72 E-value=3.2e-16 Score=122.06 Aligned_cols=172 Identities=13% Similarity=0.055 Sum_probs=112.6
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...+.|+|||+||++.+...|..+++.++++||.++.+|+++... .. ...+..+..+
T Consensus 48 ~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~--------~~---------------~~~~i~d~~~ 104 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAG--------PD---------------GTDEIKDAAA 104 (313)
T ss_pred CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCC--------CC---------------chhhHHHHHH
Confidence 345779999999999998889999999999999999999875210 00 0112334445
Q ss_pred HHHHHHHHHHHHHH--cCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcch-------hhhhhc
Q 025550 115 AVRNVHAMIDKEVA--AGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNAS-------LIDQFT 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~-------~~~~~~ 180 (251)
.++++.+.++.... ...+.++++++|||+||.+++.++..+++ .+++++.+.+....... ......
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~~~~ 184 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTYAPH 184 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcccccCcc
Confidence 55555554432221 23567899999999999999999998874 57889988886533211 000011
Q ss_pred ccCCCCCEEEEccCCCC-----ccc--chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 181 SDAKKTPILWSHGMADR-----TVL--FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~-----~~~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
......|++++.+..|. .+| .-....-.+.+.+.+.+..+.+.+++||.
T Consensus 185 s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~ 240 (313)
T PLN00021 185 SFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHM 240 (313)
T ss_pred cccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcc
Confidence 22367999999988763 222 00111223344455557788888989994
No 77
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=2.7e-16 Score=115.05 Aligned_cols=217 Identities=17% Similarity=0.151 Sum_probs=143.3
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC---CCCcCC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN---YGAVMP 91 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~g~~~~ 91 (251)
.++..+..+++-|. ....+.|+||-.||+++.+..|..+.. |...||.++.+|.||-+.....+. .|.+..
T Consensus 64 ~~g~rI~gwlvlP~-----~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 64 YGGARIKGWLVLPR-----HEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred cCCceEEEEEEeec-----ccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 45567777776632 233788999999999998877655554 566999999999997766533221 122334
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.|....-.+ ..+..-+.....++-..++.+. -..+|.+||++.|.|+||.+++.++...| ++++++...|++.
T Consensus 138 G~mtrGilD-----~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 138 GFMTRGILD-----RKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred ceeEeeccc-----CCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 443322210 0111111111222222222222 45678999999999999999998888887 6899998888775
Q ss_pred Ccchhhhhh---------------------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 171 FNASLIDQF---------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 171 ~~~~~~~~~---------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
-.....+.. -+..++.|+|+..|--|+++++...-+.++.+.. +
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---~ 288 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---S 288 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC---C
Confidence 433221110 0235899999999999999999987777777765 5
Q ss_pred eEEEEeCCCCCCCCHHH-HHHHHHHHHHhh
Q 025550 218 CEFKAYPGLGHSISNEE-LRNLESWIKTRM 246 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l 246 (251)
+++.+|+--+|.-.+.. -+++..|++...
T Consensus 289 K~i~iy~~~aHe~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 289 KTIEIYPYFAHEGGPGFQSRQQVHFLKILF 318 (321)
T ss_pred ceEEEeeccccccCcchhHHHHHHHHHhhc
Confidence 68888988889765444 455888887653
No 78
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.70 E-value=3.5e-16 Score=111.48 Aligned_cols=190 Identities=23% Similarity=0.278 Sum_probs=131.7
Q ss_pred CCccEEEEEecCCCCCCCchhh----hhhhcCCCcceEEEEccCCCCCCcccC--------------CCCc-CCcccccc
Q 025550 37 MARNFILWLHGLGDSGPANEPI----KTLFTSPEFKLTKWSFPSAPNNPVTCN--------------YGAV-MPSWFDIH 97 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~--------------~g~~-~~~w~~~~ 97 (251)
.+++-|+++||+..++..+..- ...+... +-++|+.+|..-.... .+.. .+.||...
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~----~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n 78 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL----AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNN 78 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhh----heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccc
Confidence 3567899999999999887773 3334322 4566776663110000 0111 25566554
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC-CCCCcEEEEEeChhHHHHHHHHHhc--C------CCcceEEEeccC
Q 025550 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG-IDPNNVFVCGFSQGGALTLASVLLY--P------RKLGGGAIFSGW 168 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--p------~~~~~~i~~~~~ 168 (251)
.. ........+.+++.|.+.+. +.+ .| +|+|+|+|+.++..++... . ..++-+|++||+
T Consensus 79 ~~-----~~~~~~~~eesl~yl~~~i~---enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf 146 (230)
T KOG2551|consen 79 EA-----SFTEYFGFEESLEYLEDYIK---ENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGF 146 (230)
T ss_pred cc-----ccccccChHHHHHHHHHHHH---HhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecC
Confidence 41 13334556666777777766 333 24 8999999999999888721 1 137889999998
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--HHHHHHHHHHHHhh
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--EELRNLESWIKTRM 246 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--~~~~~~~~~l~~~l 246 (251)
...........-...+++|.|.+.|+.|.+++...+..+++.+.+. ....-+| ||.... ...+.+.+||...+
T Consensus 147 ~~~~~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 147 KFPSKKLDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred CCCcchhhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCCCchHHHHHHHHHHHHHH
Confidence 8776555555556678999999999999999999999999988774 6666676 998864 45788999998877
Q ss_pred c
Q 025550 247 S 247 (251)
Q Consensus 247 ~ 247 (251)
.
T Consensus 222 ~ 222 (230)
T KOG2551|consen 222 Q 222 (230)
T ss_pred H
Confidence 5
No 79
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.70 E-value=6e-15 Score=112.08 Aligned_cols=180 Identities=14% Similarity=0.107 Sum_probs=115.7
Q ss_pred CCccEEEEEecCCCCCCC----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGDSGPA----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.++++||++||+++.... |..+++.|++.||.++.+|+|+++.+.... .....
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~-----------------------~~~~~ 79 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF-----------------------AAARW 79 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc-----------------------ccCCH
Confidence 456899999999865433 445678898899999999999886542110 01122
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh--------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ-------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~-------------- 178 (251)
...++++...++.+.+. +.++++|+||||||.+++.++.++|+.++++|++++.......+.+.
T Consensus 80 ~~~~~Dv~~ai~~L~~~--~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~ 157 (266)
T TIGR03101 80 DVWKEDVAAAYRWLIEQ--GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGES 157 (266)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccc
Confidence 23344444444433233 35689999999999999999999999999999998855422111100
Q ss_pred ------hc-------------------------c------cCCCCCEEEEccCC--CCcccchhcccchHHHHhcCCeeE
Q 025550 179 ------FT-------------------------S------DAKKTPILWSHGMA--DRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 179 ------~~-------------------------~------~~~~~p~l~~~g~~--D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
+. . .....+++++.-.. |.. ......++.+.+++.|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~v~ 236 (266)
T TIGR03101 158 AEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQWVQSGVEVT 236 (266)
T ss_pred cccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHHHHcCCeEe
Confidence 00 0 01245677766532 222 22345578999999999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 220 FKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 220 ~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
...++|- -++...++.++=..|.
T Consensus 237 ~~~~~~~-~~~~~~~~~~~p~~~~ 259 (266)
T TIGR03101 237 VDLVPGP-AFWQTQEIEEAPELIA 259 (266)
T ss_pred eeecCCc-hhhcchhhhHhHHHHH
Confidence 9999986 3334444444444443
No 80
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.70 E-value=2.8e-16 Score=111.91 Aligned_cols=184 Identities=20% Similarity=0.267 Sum_probs=128.5
Q ss_pred cEEEEEec-CCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 40 NFILWLHG-LGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 40 ~~vv~~HG-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.+||++-. +|....+-+..+..++..||.++++|+-.. |..+. ..-.....|+...+. +....++...++
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~--~~~~~~~~w~~~~~~------~~~~~~i~~v~k 111 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPS--LQKSERPEWMKGHSP------PKIWKDITAVVK 111 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCC--CChhhhHHHHhcCCc------ccchhHHHHHHH
Confidence 44555554 566666677889999999999999997543 21110 011112335444332 333444444444
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
+++ .+-+.++|+++|+++||.++..+....| .+.+++++.|......+ ....++|++++.|+.|.
T Consensus 112 ~lk--------~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~~D------~~~vk~Pilfl~ae~D~ 176 (242)
T KOG3043|consen 112 WLK--------NHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDSAD------IANVKAPILFLFAELDE 176 (242)
T ss_pred HHH--------HcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCChhH------HhcCCCCEEEEeecccc
Confidence 443 2335789999999999999998888887 68888888886644332 24578999999999999
Q ss_pred cccchhcccchHHHHhcCC-eeEEEEeCCCCCCCCH---------------HHHHHHHHHHHHhh
Q 025550 198 TVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHSISN---------------EELRNLESWIKTRM 246 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~~~~---------------~~~~~~~~~l~~~l 246 (251)
.+|++...++.+.+++... ..++++|+|.+|.+.. +...++..||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999889999988632 2579999999998752 23677888888876
No 81
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.70 E-value=5.7e-17 Score=120.08 Aligned_cols=176 Identities=21% Similarity=0.295 Sum_probs=97.8
Q ss_pred CccEEEEEecCCCCCCCchhhhh----hhcCCCcceEEEEccCCCCCC--cc------------cCCCCcCCccccccCC
Q 025550 38 ARNFILWLHGLGDSGPANEPIKT----LFTSPEFKLTKWSFPSAPNNP--VT------------CNYGAVMPSWFDIHEI 99 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~--~~------------~~~g~~~~~w~~~~~~ 99 (251)
+++-|++|||++.++..++.... .|.+.++ .++|+.+|... .+ .......+.|+.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~---ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDF---EFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT----EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcE---EEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 56789999999999988887444 3433244 44444443321 00 0112235667765432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccCCCC
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGWVPF 171 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~~~~ 171 (251)
.....++.++++.+.+.+++ .+. =.+|+|||+||.+|..++... ...++.+|+++|+.+.
T Consensus 80 ------~~~~~~~~~sl~~l~~~i~~---~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 80 ------DHEYEGLDESLDYLRDYIEE---NGP---FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp ------SGGG---HHHHHHHHHHHHH---H------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ------cccccCHHHHHHHHHHHHHh---cCC---eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 33467788888888888874 331 248999999999998887542 2258999999998886
Q ss_pred cchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 172 NASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 172 ~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
.......+....+++|++.++|++|.+++.+.++.+.+.+... .+++..+| ||.+..
T Consensus 148 ~~~~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 148 DPDYQELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR 204 (212)
T ss_dssp EE-GTTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred chhhhhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence 6555444455668999999999999999998888899988874 68888886 998764
No 82
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=1.1e-15 Score=110.99 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=126.6
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...+..++++|=.|+++..|+.+...+. ..+..+.+.+||.+.+. ...-..++.+.
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~-----------------------~ep~~~di~~L 59 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRF-----------------------GEPLLTDIESL 59 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCccccc-----------------------CCcccccHHHH
Confidence 3466788999988999999999888775 36888999999765431 12234455555
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcch-----------hhhh---
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNAS-----------LIDQ--- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~-----------~~~~--- 178 (251)
++.+...+. . -...++++++||||||.+|..+|.+... ...+++..++..|.... +.+.
T Consensus 60 ad~la~el~---~-~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 60 ADELANELL---P-PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVD 135 (244)
T ss_pred HHHHHHHhc---c-ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHH
Confidence 555544333 1 2334689999999999999999987432 25556655443331110 0000
Q ss_pred ----------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 179 ----------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 179 ----------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
.......+|+.++.|++|..++.+....+.+..++ ..+++.++
T Consensus 136 lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~---~f~l~~fd 212 (244)
T COG3208 136 LGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG---DFTLRVFD 212 (244)
T ss_pred hCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC---CceEEEec
Confidence 01125889999999999999998866555555543 68999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc
Q 025550 225 GLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 225 g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
| ||++..+..+++.++|.+.+.
T Consensus 213 G-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 213 G-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred C-cceehhhhHHHHHHHHHHHhh
Confidence 8 999999999999999999885
No 83
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.68 E-value=2.1e-15 Score=120.54 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=115.5
Q ss_pred ccEEEEEecCCCCCCC-----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 39 RNFILWLHGLGDSGPA-----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.||++||...+... ++.+++.|.++||.++.+|+++.+.. .. ..+..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s---------~~--------------~~~~~d~~ 118 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRA---------DR--------------YLTLDDYI 118 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHH---------Hh--------------cCCHHHHH
Confidence 3459999997544333 35688999999999999999754321 00 11112221
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-------------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------- 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------- 174 (251)
.+.+.+.++.+.+ ..+.+++.++|||+||.+++.++..+|+.+++++++++.......
T Consensus 119 --~~~~~~~v~~l~~-~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (350)
T TIGR01836 119 --NGYIDKCVDYICR-TSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDT 195 (350)
T ss_pred --HHHHHHHHHHHHH-HhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHh
Confidence 1123333333321 124568999999999999999999999999999988874432100
Q ss_pred ---------------------hh----------------hhh-------c------------------------------
Q 025550 175 ---------------------LI----------------DQF-------T------------------------------ 180 (251)
Q Consensus 175 ---------------------~~----------------~~~-------~------------------------------ 180 (251)
.. ..+ .
T Consensus 196 ~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~ 275 (350)
T TIGR01836 196 MGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEI 275 (350)
T ss_pred cCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEE
Confidence 00 000 0
Q ss_pred ------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-------HHHHHHHHHHHHH
Q 025550 181 ------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-------NEELRNLESWIKT 244 (251)
Q Consensus 181 ------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 244 (251)
..++++|+++++|++|.+++++.++.+.+.+.. .+++++++++ ||... .+..+.+.+||.+
T Consensus 276 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 276 GGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHh
Confidence 013688999999999999999888777776643 3578888885 88532 2345778888765
No 84
>PLN02872 triacylglycerol lipase
Probab=99.68 E-value=1.8e-15 Score=121.48 Aligned_cols=140 Identities=17% Similarity=0.168 Sum_probs=80.4
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch------hhhhhhcCCCcceEEEEccCCCCCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE------PIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
....+...|+-.+..+.++..... ....++|.|+++||.+.++..|. .++..|+++||.++.+|.|++....
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~--~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPR--LGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCC--CCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 344455566666666665422111 12234688999999988887773 2555688899999999999764311
Q ss_pred cccCCC-CcCCccccccCCCCCCCCCCChhHHHHH-HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--
Q 025550 82 VTCNYG-AVMPSWFDIHEIPVTASSPKDESSLLKA-VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-- 157 (251)
Q Consensus 82 ~~~~~g-~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-- 157 (251)
...... ....-| + ....+. ..++.++++.+.+. ..+++.++|||+||.+++.++ .+|+
T Consensus 123 gh~~~~~~~~~fw--------------~-~s~~e~a~~Dl~a~id~i~~~--~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 123 GHVTLSEKDKEFW--------------D-WSWQELALYDLAEMIHYVYSI--TNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCCCccchhcc--------------C-CcHHHHHHHHHHHHHHHHHhc--cCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 000000 000001 1 112222 25666666654322 246899999999999998444 5564
Q ss_pred -CcceEEEecc
Q 025550 158 -KLGGGAIFSG 167 (251)
Q Consensus 158 -~~~~~i~~~~ 167 (251)
.++.+++++|
T Consensus 185 ~~v~~~~~l~P 195 (395)
T PLN02872 185 EMVEAAALLCP 195 (395)
T ss_pred HHHHHHHHhcc
Confidence 3444444444
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.68 E-value=1.9e-15 Score=105.29 Aligned_cols=174 Identities=15% Similarity=0.108 Sum_probs=117.7
Q ss_pred CCCCccEEEEEecCC---CCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 35 NPMARNFILWLHGLG---DSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
..+..|+.|++|--. ++..+ -..++..|.+.|+.+++++|++.+.+..+...| --..
T Consensus 24 ~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G------------------iGE~ 85 (210)
T COG2945 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG------------------IGEL 85 (210)
T ss_pred CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC------------------cchH
Confidence 356789999999744 33222 233677899999999999999876654333333 1234
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEE
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPIL 189 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 189 (251)
+|...+++|+++ .+-+.....+.|+|+|+++++.+|.+.|+ ....+++++..... +..-......|.+
T Consensus 86 ~Da~aaldW~~~-------~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----dfs~l~P~P~~~l 153 (210)
T COG2945 86 EDAAAALDWLQA-------RHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----DFSFLAPCPSPGL 153 (210)
T ss_pred HHHHHHHHHHHh-------hCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch----hhhhccCCCCCce
Confidence 566666666654 33344445789999999999999999986 55566666655421 1111223568999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHH
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIK 243 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 243 (251)
+++|+.|++++.....++.+- .+.+.++.++++|+|..+. .+.+.+|+.
T Consensus 154 vi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 154 VIQGDADDVVDLVAVLKWQES-----IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred eEecChhhhhcHHHHHHhhcC-----CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 999999998887754433332 4678899999999998443 466677764
No 86
>PRK05855 short chain dehydrogenase; Validated
Probab=99.68 E-value=1.6e-15 Score=129.50 Aligned_cols=178 Identities=12% Similarity=0.111 Sum_probs=114.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|.|||+||++++...|..+.+.| ..+|.++.+|+|+++.+.... .....++.+.++
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~a~ 81 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPK---------------------RTAAYTLARLAD 81 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCC---------------------cccccCHHHHHH
Confidence 3578999999999999999999988 578999999999886542110 111234566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCC----------C----c---------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVP----------F----N--------- 172 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~----------~----~--------- 172 (251)
++..+++. .+. .+++.|+||||||.+++.++.+. +..+..++.+++... . .
T Consensus 82 dl~~~i~~---l~~-~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (582)
T PRK05855 82 DFAAVIDA---VSP-DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQ 157 (582)
T ss_pred HHHHHHHH---hCC-CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHH
Confidence 77777773 222 24599999999999998776652 233333333322110 0 0
Q ss_pred -------------------------chhhh---h--------------------------------h---cccCCCCCEE
Q 025550 173 -------------------------ASLID---Q--------------------------------F---TSDAKKTPIL 189 (251)
Q Consensus 173 -------------------------~~~~~---~--------------------------------~---~~~~~~~p~l 189 (251)
..... . . .....++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (582)
T PRK05855 158 LLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQ 237 (582)
T ss_pred HhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceE
Confidence 00000 0 0 0012679999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+++|++|.+++....+.+.+.+. ..++++++ +||....+..+.+.+.+.+++
T Consensus 238 ii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl 289 (582)
T PRK05855 238 LIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPMSHPQVLAAAVAEFV 289 (582)
T ss_pred EEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchhhChhHHHHHHHHHH
Confidence 99999999999887776665543 34667777 599987666555554444444
No 87
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.66 E-value=1.3e-14 Score=116.45 Aligned_cols=199 Identities=16% Similarity=0.093 Sum_probs=133.8
Q ss_pred CCCCccEEEEEecCCCCCCC-------------chhhhh---hhcCCCcceEEEEccCCCCCC---------cccCCCCc
Q 025550 35 NPMARNFILWLHGLGDSGPA-------------NEPIKT---LFTSPEFKLTKWSFPSAPNNP---------VTCNYGAV 89 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~-------------~~~~~~---~~~~~g~~~~~~~~~~~~~~~---------~~~~~g~~ 89 (251)
...+.++||++|+++++... |..++- .+-...|-++.++..+...+. .+...+.+
T Consensus 52 n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg 131 (389)
T PRK06765 52 NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTG 131 (389)
T ss_pred CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCC
Confidence 33556999999999885421 444333 466678889999998764321 11111110
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..| .......++.+.++.+..+++ ..++ +++. ++||||||.+++.++.++|++++++|++++.
T Consensus 132 -~~~----------~~~fP~~t~~d~~~~~~~ll~---~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 132 -KPY----------GMDFPVVTILDFVRVQKELIK---SLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred -Ccc----------CCCCCcCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 111 001223566667777777776 3444 4665 9999999999999999999999999998653
Q ss_pred CCCcch-------------------------------------------------h-hhhhc------------------
Q 025550 169 VPFNAS-------------------------------------------------L-IDQFT------------------ 180 (251)
Q Consensus 169 ~~~~~~-------------------------------------------------~-~~~~~------------------ 180 (251)
...... . ...+.
T Consensus 196 ~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 196 PQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhh
Confidence 211000 0 00000
Q ss_pred -------------------------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 181 -------------------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 181 -------------------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
...+++|+++++|+.|.++|++.++.+.+.+...+.+
T Consensus 276 ~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 276 FEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 0136899999999999999999888888888765556
Q ss_pred eEEEEeCC-CCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 218 CEFKAYPG-LGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 218 ~~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.+++++++ .||....+..+.+.+-|.++|..+
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 89999985 899988888777777777777643
No 88
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=3.6e-15 Score=120.88 Aligned_cols=209 Identities=17% Similarity=0.207 Sum_probs=146.0
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCc--hhhhh--hhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PAN--EPIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~--~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
..+..+-..+..|.... ..+++|+++++-|+.+-. ..| ....+ .|++.||.++.+|-+|.-.+ |
T Consensus 621 ~tg~~lYgmiyKPhn~~---pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR------G 691 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQ---PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR------G 691 (867)
T ss_pred CCCcEEEEEEEccccCC---CCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc------c
Confidence 34444444445543333 566799999999988532 222 22222 68889999999998875443 5
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHc-CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
....+|+.. ...+.++++.++.++-+.+ +. -+|.+||+|-|+|+||+++++...++|+.++.+|+-+
T Consensus 692 lkFE~~ik~---------kmGqVE~eDQVeglq~Lae---q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGa 759 (867)
T KOG2281|consen 692 LKFESHIKK---------KMGQVEVEDQVEGLQMLAE---QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGA 759 (867)
T ss_pred hhhHHHHhh---------ccCeeeehhhHHHHHHHHH---hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccC
Confidence 555555433 3455666667777766666 55 4599999999999999999999999999999888766
Q ss_pred cCCCC---cchhhhhh-----------c----------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 167 GWVPF---NASLIDQF-----------T----------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 167 ~~~~~---~~~~~~~~-----------~----------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
+.... .....+++ . -......++++||--|..|...+...+...|.++|.+.++.+
T Consensus 760 pVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 760 PVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred cceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 63321 11111110 0 012455699999999999999999999999999999999999
Q ss_pred eCCCCCCCCHHH-----HHHHHHHHHH
Q 025550 223 YPGLGHSISNEE-----LRNLESWIKT 244 (251)
Q Consensus 223 ~~g~~H~~~~~~-----~~~~~~~l~~ 244 (251)
||+.-|.....+ -..+..|+++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 999999876332 2446666654
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.63 E-value=1e-14 Score=103.63 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=99.6
Q ss_pred EEEEecCCCCC-CCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 42 ILWLHGLGDSG-PANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 42 vv~~HG~~~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+++||++++. .+|.. +.+.+... ..+..+. .+..++.+-+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~----~~V~~~~------------------------------~~~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS----VRVEQPD------------------------------WDNPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS----EEEEEC--------------------------------TS--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC----eEEeccc------------------------------cCCCCHHHHHHHH
Confidence 68999999764 56777 44456544 3444431 1233444445555
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHH-HhcCCCcceEEEeccCCCC-cchhhh------hhcccCCCCCEEEE
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASV-LLYPRKLGGGAIFSGWVPF-NASLID------QFTSDAKKTPILWS 191 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~p~~~~~~i~~~~~~~~-~~~~~~------~~~~~~~~~p~l~~ 191 (251)
.+.+. .+ .++++++|||+|+..++.++ .....+++++++++|+... ...... .........|.+++
T Consensus 47 ~~~i~-----~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~vi 120 (171)
T PF06821_consen 47 DQAID-----AI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVI 120 (171)
T ss_dssp HHCCH-----C--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEE
T ss_pred HHHHh-----hc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEE
Confidence 55444 12 35699999999999999999 6677889999999998653 111111 11122355677999
Q ss_pred ccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHH
Q 025550 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIK 243 (251)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 243 (251)
.+++|+.+|.+.++.+.+.+.. +++.++++||....+. +..+.+.|+
T Consensus 121 aS~nDp~vp~~~a~~~A~~l~a-----~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 121 ASDNDPYVPFERAQRLAQRLGA-----ELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EETTBSSS-HHHHHHHHHHHT------EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EcCCCCccCHHHHHHHHHHcCC-----CeEECCCCCCcccccCCCchHHHHHHhc
Confidence 9999999999999889888865 8999999999876543 455555544
No 90
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.63 E-value=6e-14 Score=113.27 Aligned_cols=188 Identities=19% Similarity=0.184 Sum_probs=116.8
Q ss_pred CCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.++.|+|+++||...... ....+....++....-+++.++..... . .+.. .......-..
T Consensus 206 ~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~------~----~R~~--------el~~~~~f~~ 267 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT------T----HRSQ--------ELPCNADFWL 267 (411)
T ss_pred CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc------c----cccc--------cCCchHHHHH
Confidence 357899999999553221 122233334434444445555533110 0 0000 0011222233
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------hhhhhhcc---cC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-------SLIDQFTS---DA 183 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-------~~~~~~~~---~~ 183 (251)
..+++|...|++......++++.+|+|+||||..++++++++|+.|.+++++||.+-... .+...+.. ..
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~ 347 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSA 347 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHhcccCC
Confidence 345666666665322334778899999999999999999999999999999999652111 11222222 12
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
.+..+++.+|+.|..+ .+..+.+.+.|++.|.++++.+++| ||... ...+.+.+.||-
T Consensus 348 ~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 348 RGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDALCWRGGLIQGLIDLW 407 (411)
T ss_pred CCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHHHHHHHHHHHHHh
Confidence 3456888999998644 4566889999999999999999998 89753 455666666654
No 91
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.60 E-value=6.1e-15 Score=117.73 Aligned_cols=185 Identities=14% Similarity=0.203 Sum_probs=89.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCccc-CCC-----------CcCCccccccCCCCCCC
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTC-NYG-----------AVMPSWFDIHEIPVTAS 104 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g-----------~~~~~w~~~~~~~~~~~ 104 (251)
.+.|+|||.||.+++...|..++..|+++||.|++++.++........ ..+ .....|.+.........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 679999999999999999999999999999999999999653321111 000 00112332222100000
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH--H-------------------cCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE
Q 025550 105 SPKDESSLLKAVRNVHAMIDKEV--A-------------------AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA 163 (251)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~i~~~~--~-------------------~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i 163 (251)
.......+..-+.++..+++.+. . ..+|.++|+++|||+||..+..++.+. .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 00001122222333333333221 1 123567899999999999999887777 4799999
Q ss_pred EeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 164 IFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+.||..+.... .. ...+.|+|+++.+.= . -..+...+.+ +...+....+..+.|..|.
T Consensus 257 ~LD~W~~Pl~~~--~~--~~i~~P~L~InSe~f-~-~~~~~~~~~~-~~~~~~~~~~~ti~gt~H~ 315 (379)
T PF03403_consen 257 LLDPWMFPLGDE--IY--SKIPQPLLFINSESF-Q-WWENIFRMKK-VISNNKESRMLTIKGTAHL 315 (379)
T ss_dssp EES---TTS-GG--GG--GG--S-EEEEEETTT----HHHHHHHHT-T--TTS-EEEEEETT--GG
T ss_pred EeCCcccCCCcc--cc--cCCCCCEEEEECccc-C-ChhhHHHHHH-HhccCCCcEEEEECCCcCC
Confidence 999987543221 11 346789999987652 1 2222222222 2223445678889999994
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.60 E-value=9.2e-14 Score=99.84 Aligned_cols=154 Identities=20% Similarity=0.263 Sum_probs=98.8
Q ss_pred EEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+++||+.++....+. +.+.+.+.+... .+-.|.. ......+++.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~-~~~~p~l-------------------------------~~~p~~a~~~l 49 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDI-QYPCPDL-------------------------------PPFPEEAIAQL 49 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCc-eEECCCC-------------------------------CcCHHHHHHHH
Confidence 7999999998877665 455666554322 2222211 12234445666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc-------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT------------------- 180 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~------------------- 180 (251)
.+.++. . ..+.++|+|.|+||..|.+++.+++ +++ |+++|.+.+...+.+.+.
T Consensus 50 ~~~i~~---~--~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~ 121 (187)
T PF05728_consen 50 EQLIEE---L--KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE 121 (187)
T ss_pred HHHHHh---C--CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh
Confidence 666652 2 3345999999999999999998886 455 668876654433322111
Q ss_pred --------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 181 --------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 181 --------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
......++++++++.|+++++..+ .+.++. +..++.+|++|.+. .+..+.+.+|+
T Consensus 122 ~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~----~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 122 ELKALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRG----CAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred hcceEeccccCCCccEEEEEecCCcccCHHHH---HHHhcC----ceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 112457999999999999998543 333433 23445677899986 55677888876
No 93
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=1.4e-13 Score=102.53 Aligned_cols=118 Identities=25% Similarity=0.400 Sum_probs=79.1
Q ss_pred CCccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.|+||++||.++++..+.... +...+.||.|+ ||+.-... ........|+...+ ...+..
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~---yPdg~~~~---wn~~~~~~~~~p~~------~~~g~d--- 123 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVA---YPDGYDRA---WNANGCGNWFGPAD------RRRGVD--- 123 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEE---CcCccccc---cCCCcccccCCccc------ccCCcc---
Confidence 34499999999998887666633 34556677555 44211100 00111222322221 022223
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.+..|++++..+. +.++|++||.+.|.|.||.++..+++.+|+.+.++..+++..+
T Consensus 124 -dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 124 -DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred -HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 3556666666666 8999999999999999999999999999999999999998763
No 94
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.55 E-value=6.5e-14 Score=103.65 Aligned_cols=119 Identities=22% Similarity=0.363 Sum_probs=77.6
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------hhh---------------------
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA----------SLI--------------------- 176 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~----------~~~--------------------- 176 (251)
+..++.++|+|+|.|.||-+|+.+|..+| .++++|+++|..-... .+.
T Consensus 16 ~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ 94 (213)
T PF08840_consen 16 HPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPGLLRSRY 94 (213)
T ss_dssp STTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS-EE-TT
T ss_pred CCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCcceehhh
Confidence 55678899999999999999999999999 6999999987322110 000
Q ss_pred ------------hhhcccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCe--eEEEEeCCCCCCCC----------
Q 025550 177 ------------DQFTSDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGIS--CEFKAYPGLGHSIS---------- 231 (251)
Q Consensus 177 ------------~~~~~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~---------- 231 (251)
..+..+++++|+|++.|++|...|.. .++.+.++|++.+.+ ++++.|+++||.+.
T Consensus 95 ~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~ 174 (213)
T PF08840_consen 95 AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRAS 174 (213)
T ss_dssp -B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EE
T ss_pred hhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccc
Confidence 00112358999999999999998764 455667788888765 88899999999652
Q ss_pred ----------------------HHHHHHHHHHHHHhhc
Q 025550 232 ----------------------NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 ----------------------~~~~~~~~~~l~~~l~ 247 (251)
.+.+.++++||+++|.
T Consensus 175 ~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 175 YHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp EETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1237889999999885
No 95
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.55 E-value=3.3e-13 Score=102.47 Aligned_cols=184 Identities=17% Similarity=0.141 Sum_probs=124.9
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
...+.|.++++||.-+++.+|+.+...|.. .+..++.+|.+.++.+|....+ +..
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h------------------------~~~ 103 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH------------------------NYE 103 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc------------------------CHH
Confidence 445789999999999999999998886553 4668899999988876544322 244
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCCCcceEEEec--c-CCCCcc-h--------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPRKLGGGAIFS--G-WVPFNA-S-------------- 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~~~~~~i~~~--~-~~~~~~-~-------------- 174 (251)
++.+++..+++... ......++.|+|||||| .+++..+..+|+.+..+|... | ..+... .
T Consensus 104 ~ma~dv~~Fi~~v~-~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~ 182 (315)
T KOG2382|consen 104 AMAEDVKLFIDGVG-GSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLS 182 (315)
T ss_pred HHHHHHHHHHHHcc-cccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhcccc
Confidence 44555555555321 01124578999999999 777888888888776665542 2 111000 0
Q ss_pred ---------hhh-----------------hh----------------------------------cccCCCCCEEEEccC
Q 025550 175 ---------LID-----------------QF----------------------------------TSDAKKTPILWSHGM 194 (251)
Q Consensus 175 ---------~~~-----------------~~----------------------------------~~~~~~~p~l~~~g~ 194 (251)
..+ .+ .......|+++++|.
T Consensus 183 ~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~ 262 (315)
T KOG2382|consen 183 IGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGL 262 (315)
T ss_pred ccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecC
Confidence 000 00 002367899999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++..++.+.- ..+++....++++.++++||+...|.++.+++-+.+++.
T Consensus 263 ~S~fv~~~~~----~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 263 QSKFVPDEHY----PRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred CCCCcChhHH----HHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 9999997743 344444445899999999999998887777777766554
No 96
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.52 E-value=7.3e-13 Score=100.50 Aligned_cols=188 Identities=12% Similarity=0.110 Sum_probs=115.2
Q ss_pred CCCCCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
|.+.+.|.||++||..++... | +.+.+.+.++||.++++++|++...+.....-+. .-..+|
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh----------------~G~t~D 133 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH----------------SGETED 133 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec----------------ccchhH
Confidence 456677999999997765544 3 3378899999999999999998765433222110 001234
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCC-CcceEEEeccCCCCc-------chhh----h-
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPR-KLGGGAIFSGWVPFN-------ASLI----D- 177 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~-~~~~~i~~~~~~~~~-------~~~~----~- 177 (251)
+...++++++ . ....++..+|+|+|| +++.+++..-.+ .+.+.+.+|..++.. ..+. +
T Consensus 134 ~~~~l~~l~~-------~-~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r 205 (345)
T COG0429 134 IRFFLDWLKA-------R-FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR 205 (345)
T ss_pred HHHHHHHHHH-------h-CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHH
Confidence 4333443332 2 246789999999999 555555544222 244444454422210 0000 0
Q ss_pred ---------------------------hhc----------------------------------ccCCCCCEEEEccCCC
Q 025550 178 ---------------------------QFT----------------------------------SDAKKTPILWSHGMAD 196 (251)
Q Consensus 178 ---------------------------~~~----------------------------------~~~~~~p~l~~~g~~D 196 (251)
.+. ..++.+|++++++.+|
T Consensus 206 ~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DD 285 (345)
T COG0429 206 YLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDD 285 (345)
T ss_pred HHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCC
Confidence 000 1258899999999999
Q ss_pred CcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-------H--HHHHHHHHHHHHhhcC
Q 025550 197 RTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-------N--EELRNLESWIKTRMSC 248 (251)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-------~--~~~~~~~~~l~~~l~~ 248 (251)
++++.+..-..... ....+.+...+.+||.-+ . -..+.+.+|+..++..
T Consensus 286 P~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 286 PFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 99998754433332 345688888888899421 1 1246788998887653
No 97
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.52 E-value=1.4e-13 Score=96.75 Aligned_cols=183 Identities=17% Similarity=0.189 Sum_probs=119.8
Q ss_pred CccEEEEEec-CCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHG-LGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG-~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
....|+++.| .|+...+|..... .+....+.++.+|=|+.+.+..+ ......+-+...
T Consensus 41 G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP--------------------~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 41 GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP--------------------ERKFEVQFFMKD 100 (277)
T ss_pred CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC--------------------cccchHHHHHHh
Confidence 3356777777 4566778888554 44445588899998866543211 001122333333
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh--------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-------------------- 175 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-------------------- 175 (251)
.++..++++. ++.+++.|+|+|-||..++..|+++++.+...+..++..-....-
T Consensus 101 a~~avdLM~a-----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P 175 (277)
T KOG2984|consen 101 AEYAVDLMEA-----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQP 175 (277)
T ss_pred HHHHHHHHHH-----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcch
Confidence 4444444443 256799999999999999999999999988888776633221110
Q ss_pred -hhh------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 176 -IDQ------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 176 -~~~------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
... ....+.++|++++||+.|++++..++. +...+.. -.+++++|
T Consensus 176 ~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~-fi~~~~~---~a~~~~~p 251 (277)
T KOG2984|consen 176 YEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVC-FIPVLKS---LAKVEIHP 251 (277)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCcc-chhhhcc---cceEEEcc
Confidence 000 011368999999999999999877654 3333333 35788899
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 225 GLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 225 g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.++|.+.....+++..-..++|+++
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhcc
Confidence 9999998776666666666666543
No 98
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.52 E-value=4.6e-13 Score=99.75 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=111.2
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...++|+|||+||+......|..+.+.+++.||.++.+++..... .....+.....+
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------------------~~~~~~~~~~~~ 69 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGG-----------------------PDDTDEVASAAE 69 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCC-----------------------CCcchhHHHHHH
Confidence 456799999999999766668889999999999999988432100 001224455666
Q ss_pred HHHHHHHHHHHHHH--cCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcc------hhhhh-hc
Q 025550 115 AVRNVHAMIDKEVA--AGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNA------SLIDQ-FT 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~------~~~~~-~~ 180 (251)
.++|+.+-++..+. ...|..+++|+|||.||-++..++..+ +.++++++++.|.-.... ..... ..
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~ 149 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQ 149 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCccc
Confidence 66666654443221 134788999999999999999999887 457999999988653111 11111 11
Q ss_pred ccCCCCCEEEEccCCCCcc------cc-hhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 181 SDAKKTPILWSHGMADRTV------LF-EAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~------~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.-....|++++-..-.... +. -......+.+.+...+.-..+.++.||.
T Consensus 150 s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 150 SFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHM 205 (259)
T ss_pred ccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCch
Confidence 1124599988766555421 11 1122344444555556666777889994
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=1.3e-12 Score=110.39 Aligned_cols=124 Identities=12% Similarity=0.023 Sum_probs=80.7
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC---Cc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP---AN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~---~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.++..+..++..| ...++.|+||++||++.+.. .+ ......|+++||.++.+|+++.+.+...
T Consensus 4 ~DG~~L~~~~~~P------~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~------- 70 (550)
T TIGR00976 4 RDGTRLAIDVYRP------AGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGE------- 70 (550)
T ss_pred CCCCEEEEEEEec------CCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCc-------
Confidence 3455665544442 12347899999999987643 12 2245678889999999999987654211
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..++. .....|+.+.++++ .+......+|+++|+|+||.+++.+|..+|+.+++++..++.
T Consensus 71 ~~~~~----------~~~~~D~~~~i~~l-------~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 71 FDLLG----------SDEAADGYDLVDWI-------AKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred eEecC----------cccchHHHHHHHHH-------HhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 01100 11233333333333 222233469999999999999999999999899999987763
No 100
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.50 E-value=6.5e-13 Score=97.97 Aligned_cols=105 Identities=21% Similarity=0.302 Sum_probs=77.4
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...-|+++++||+|.++-.|..++..+. .....++++|+|++++.-. .+.+.-+.+.
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~----------------------~~e~dlS~eT 128 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKV----------------------ENEDDLSLET 128 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcccc----------------------CChhhcCHHH
Confidence 4567999999999999999999888554 3456678999998866321 1334456667
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEe
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIF 165 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~ 165 (251)
..+++-++++++. +-...+|+|+||||||.++.+.|... |. +.|++.+
T Consensus 129 ~~KD~~~~i~~~f--ge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~vi 178 (343)
T KOG2564|consen 129 MSKDFGAVIKELF--GELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVI 178 (343)
T ss_pred HHHHHHHHHHHHh--ccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEE
Confidence 7788888887654 22456799999999999998887653 44 6666654
No 101
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.49 E-value=2e-12 Score=116.27 Aligned_cols=180 Identities=17% Similarity=0.169 Sum_probs=117.8
Q ss_pred CccEEEEEecCCCCCCCchhh-----hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLGDSGPANEPI-----KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
..+.||++||++.+...|... .+.|.++||.++.+|+- .+..+ .+ . ...++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~~~----~~------------------~-~~~~l 121 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPDKV----EG------------------G-MERNL 121 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-CCChh----Hc------------------C-ccCCH
Confidence 457899999999998888764 67888899999999962 22110 00 0 01233
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcc------------h-----
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNA------------S----- 174 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~------------~----- 174 (251)
.+.+..+.+.++.+... ..+++.++||||||.+++.+++.+ +++++++++++...++.. .
T Consensus 122 ~~~i~~l~~~l~~v~~~--~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~ 199 (994)
T PRK07868 122 ADHVVALSEAIDTVKDV--TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFM 199 (994)
T ss_pred HHHHHHHHHHHHHHHHh--hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccc
Confidence 33444455554432212 235799999999999998888755 457898887544321100 0
Q ss_pred ------------------------------------------hh------------hhh---------------------
Q 025550 175 ------------------------------------------LI------------DQF--------------------- 179 (251)
Q Consensus 175 ------------------------------------------~~------------~~~--------------------- 179 (251)
.. ..+
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~ 279 (994)
T PRK07868 200 ADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRM 279 (994)
T ss_pred hhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcc
Confidence 00 000
Q ss_pred ------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEE-EEeCCCCCCC-------CHHHHHHHH
Q 025550 180 ------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF-KAYPGLGHSI-------SNEELRNLE 239 (251)
Q Consensus 180 ------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~~H~~-------~~~~~~~~~ 239 (251)
...++++|+++++|++|.+++++.++.+.+.+.. .++ ..++++||.- ..+.+..+.
T Consensus 280 ~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~ 355 (994)
T PRK07868 280 MTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSRAAQQTWPTVA 355 (994)
T ss_pred cCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechhhhhhhChHHH
Confidence 0024678999999999999999987777665543 344 4668889973 355678999
Q ss_pred HHHHHhhc
Q 025550 240 SWIKTRMS 247 (251)
Q Consensus 240 ~~l~~~l~ 247 (251)
+||.++-.
T Consensus 356 ~wl~~~~~ 363 (994)
T PRK07868 356 DWVKWLEG 363 (994)
T ss_pred HHHHHhcc
Confidence 99988753
No 102
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.49 E-value=3.1e-12 Score=95.18 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=82.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|.+.+..+||-+||..++..+|+.+...|.+.|++++.+.|||.+..+. .+.....-.
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~----------------------~~~~~~~n~ 87 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPG----------------------YPDQQYTNE 87 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCC----------------------CcccccChH
Confidence 3455667999999999999999999999999999999999997654321 122233334
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
+-..++.++++ +.+++ ++++.+|||.|+-.|+.++..+| ..+++++++.
T Consensus 88 er~~~~~~ll~---~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 88 ERQNFVNALLD---ELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHH---HcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 44556666666 55665 78999999999999999999996 5677777763
No 103
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.48 E-value=1.4e-12 Score=107.88 Aligned_cols=108 Identities=10% Similarity=0.060 Sum_probs=68.3
Q ss_pred CCccEEEEEecCCCCCCCch-----hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGPANE-----PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+.||++||+......+. .++++|.++||.++.+|+++.+.. ...+ ...+
T Consensus 186 ~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s---------~~~~--------------~~dd 242 (532)
T TIGR01838 186 VHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDAS---------QADK--------------TFDD 242 (532)
T ss_pred CCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcc---------cccC--------------Chhh
Confidence 35677999999876555443 588899999999999999865431 1111 1111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHH----HHHHhc-CCCcceEEEeccCCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTL----ASVLLY-PRKLGGGAIFSGWVP 170 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~----~~a~~~-p~~~~~~i~~~~~~~ 170 (251)
+ ..+.+.+.++.+. ...+.+++.++|||+||.++. .++... +++++++++++...+
T Consensus 243 Y--~~~~i~~al~~v~-~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 243 Y--IRDGVIAALEVVE-AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred h--HHHHHHHHHHHHH-HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 1 1112222222221 112567899999999999852 234444 778999998887554
No 104
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.47 E-value=1e-12 Score=98.35 Aligned_cols=188 Identities=14% Similarity=0.145 Sum_probs=117.2
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCccc-----CCCCcCCccccccCCCCCCC-CCC
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTC-----NYGAVMPSWFDIHEIPVTAS-SPK 107 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~w~~~~~~~~~~~-~~~ 107 (251)
+++.+.|+|||.||.|++..-|..++-.++++||.+.++..|+........ ..+....+|........... ..-
T Consensus 113 tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 457899999999999999999999999999999999999988664431111 12333456665544422222 111
Q ss_pred ChhHHHHHHHHHHHHHHH----------------------HHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 108 DESSLLKAVRNVHAMIDK----------------------EVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~----------------------~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
..+.+..-+.++...++- ..+.+++..+++++|||+||..+......+. .+++.|++
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeee
Confidence 222232223322222211 1134467778999999999998886665554 68999999
Q ss_pred ccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 166 SGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+|.-+-+.. .....+.|++++.-++=. . .++. ...++....+..-..+++.|.-|.
T Consensus 272 D~WM~Pl~~~----~~~~arqP~~finv~~fQ-~-~en~-~vmKki~~~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 272 DAWMFPLDQL----QYSQARQPTLFINVEDFQ-W-NENL-LVMKKIESQNEGNHVITLDGSVHQ 328 (399)
T ss_pred eeeecccchh----hhhhccCCeEEEEccccc-c-hhHH-HHHHhhhCCCccceEEEEccceec
Confidence 9988654332 223467999999843221 1 2222 233444444444577788888884
No 105
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.47 E-value=3.8e-13 Score=101.09 Aligned_cols=148 Identities=20% Similarity=0.246 Sum_probs=99.0
Q ss_pred cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHH
Q 025550 67 FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGA 146 (251)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~ 146 (251)
|.++.+|.||.+.+. +.|. .........+..+.+..+++ ..+ .+++.++||||||.
T Consensus 1 f~vi~~d~rG~g~S~---------~~~~----------~~~~~~~~~~~~~~~~~~~~---~l~--~~~~~~vG~S~Gg~ 56 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS---------PHWD----------PDFPDYTTDDLAADLEALRE---ALG--IKKINLVGHSMGGM 56 (230)
T ss_dssp EEEEEEECTTSTTSS---------SCCG----------SGSCTHCHHHHHHHHHHHHH---HHT--TSSEEEEEETHHHH
T ss_pred CEEEEEeCCCCCCCC---------CCcc----------CCcccccHHHHHHHHHHHHH---HhC--CCCeEEEEECCChH
Confidence 568899999875542 1010 01122334444444444444 334 34599999999999
Q ss_pred HHHHHHHhcCCCcceEEEeccCC--C--C-cchhhh-----h--------------------------------------
Q 025550 147 LTLASVLLYPRKLGGGAIFSGWV--P--F-NASLID-----Q-------------------------------------- 178 (251)
Q Consensus 147 ~a~~~a~~~p~~~~~~i~~~~~~--~--~-~~~~~~-----~-------------------------------------- 178 (251)
+++.++..+|+++++++++++.. . . ...... .
T Consensus 57 ~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (230)
T PF00561_consen 57 LALEYAAQYPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQ 136 (230)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHCchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhc
Confidence 99999999999999999998851 0 0 000000 0
Q ss_pred --------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 179 --------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 179 --------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
.....+++|+++++|++|.++|++.+..+.+.+. ..++++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~ 212 (230)
T PF00561_consen 137 FQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGS 212 (230)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTC
T ss_pred cchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCC
Confidence 0012589999999999999999987665444443 3789999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 025550 227 GHSISNEELRNLESWI 242 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l 242 (251)
||....+..+.+.+-|
T Consensus 213 GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 213 GHFAFLEGPDEFNEII 228 (230)
T ss_dssp CSTHHHHSHHHHHHHH
T ss_pred ChHHHhcCHHhhhhhh
Confidence 9998877776666554
No 106
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.47 E-value=2e-12 Score=112.01 Aligned_cols=173 Identities=17% Similarity=0.126 Sum_probs=119.5
Q ss_pred hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHH----H----HHHHc
Q 025550 58 IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMI----D----KEVAA 129 (251)
Q Consensus 58 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i----~----~~~~~ 129 (251)
+.++|..+||.++.+|.+|.+.+.. .| .. .......+..+.++++.... + ..++.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG---------~~-~~-------~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq 333 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDG---------CP-TT-------GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKA 333 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCC---------cC-cc-------CCHHHHHHHHHHHHHHhhCCcccccccccccccc
Confidence 5568899999999999998755321 11 00 01234455666666665310 0 00011
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------------------h--------------
Q 025550 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------------------L-------------- 175 (251)
Q Consensus 130 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------------------~-------------- 175 (251)
.....+|+++|.|+||.+++.+|...|+.++++|..++....... +
T Consensus 334 ~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~ 413 (767)
T PRK05371 334 DWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDY 413 (767)
T ss_pred CCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchh
Confidence 223579999999999999999999988899999988764321100 0
Q ss_pred ------hh-----------h---------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 176 ------ID-----------Q---------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 176 ------~~-----------~---------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
.+ . ....++++|+|+++|..|..+++.++.++++.+++.+.+.++.+.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~ 493 (767)
T PRK05371 414 LRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH 493 (767)
T ss_pred hcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe
Confidence 00 0 001248899999999999999999888999999998888899888
Q ss_pred CCCCCCCC-----HHHHHHHHHHHHHhhcC
Q 025550 224 PGLGHSIS-----NEELRNLESWIKTRMSC 248 (251)
Q Consensus 224 ~g~~H~~~-----~~~~~~~~~~l~~~l~~ 248 (251)
++ +|... .+..+.+.+||..+|+.
T Consensus 494 ~g-~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 494 QG-GHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CC-CccCCCchhHHHHHHHHHHHHHhcccc
Confidence 76 89643 13367789999999874
No 107
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.47 E-value=1.2e-13 Score=105.55 Aligned_cols=125 Identities=23% Similarity=0.348 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------------hhhhh-
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------------LIDQF- 179 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------------~~~~~- 179 (251)
..++|...|+. +..+..++.+|+|+||||..|+.++.++|+.+.+++++||....... .....
T Consensus 98 l~~el~p~i~~--~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 175 (251)
T PF00756_consen 98 LTEELIPYIEA--NYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIK 175 (251)
T ss_dssp HHTHHHHHHHH--HSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHH
T ss_pred hhccchhHHHH--hcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhh
Confidence 34556666554 55555555899999999999999999999999999999986443210 00001
Q ss_pred --cccCCCCCEEEEccCCCCcccc----------hhcccchHHHHhcCCeeEEEEeCCCCCCC--CHHHHHHHHHHH
Q 025550 180 --TSDAKKTPILWSHGMADRTVLF----------EAGQAGPPFLEQAGISCEFKAYPGLGHSI--SNEELRNLESWI 242 (251)
Q Consensus 180 --~~~~~~~p~l~~~g~~D~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~g~~H~~--~~~~~~~~~~~l 242 (251)
.......++++.+|+.|..... ...+.+.+.++..+.+..++.++| +|.. +...+.+.+.|+
T Consensus 176 ~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G-~H~~~~W~~~l~~~L~~~ 251 (251)
T PF00756_consen 176 ALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPG-GHDWAYWRRRLPDALPWM 251 (251)
T ss_dssp HHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHS-ESSHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecC-ccchhhHHHHHHHHHhhC
Confidence 1234667889999999984321 122334444555677888899996 8875 456666666664
No 108
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.44 E-value=2.2e-11 Score=82.53 Aligned_cols=170 Identities=17% Similarity=0.182 Sum_probs=106.1
Q ss_pred CCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+.+....+||+-||.|.+-. .....+..|+..|+.+..+.||-.-.++. |. ...+.....
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrt----g~--------------rkPp~~~~t 70 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRT----GR--------------RKPPPGSGT 70 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccc----cC--------------CCCcCcccc
Confidence 45566679999999886543 45557889999999999999984433211 10 000111111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc---ccCCCCCE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT---SDAKKTPI 188 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~p~ 188 (251)
.... ++...++ + ..+.+..++++-|+||||.++.+++...--.+.++++++-.+-..... +... ...+++|+
T Consensus 71 ~~~~--~~~~~aq-l-~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP-e~~Rt~HL~gl~tPt 145 (213)
T COG3571 71 LNPE--YIVAIAQ-L-RAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP-EQLRTEHLTGLKTPT 145 (213)
T ss_pred CCHH--HHHHHHH-H-HhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc-ccchhhhccCCCCCe
Confidence 1111 1111111 1 334566789999999999999988876555588888775433222111 1111 23488999
Q ss_pred EEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 189 LWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 189 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
++.+|+.|.+=..+.+ .... ...+.+++.++++.|.+.
T Consensus 146 li~qGtrD~fGtr~~V---a~y~--ls~~iev~wl~~adHDLk 183 (213)
T COG3571 146 LITQGTRDEFGTRDEV---AGYA--LSDPIEVVWLEDADHDLK 183 (213)
T ss_pred EEeecccccccCHHHH---Hhhh--cCCceEEEEeccCccccc
Confidence 9999999998665543 1111 234689999999999874
No 109
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.44 E-value=1.3e-12 Score=100.63 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=80.0
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|++|++||++++. ..|.. +.+ ++...++.++.+|+++.... .+ .......
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~-----------~y------------~~a~~~~ 89 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP-----------NY------------PQAVNNT 89 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc-----------Ch------------HHHHHhH
Confidence 45678999999999887 55554 454 45557899999999854110 00 1111223
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
....+.+..+++.+. ..+++.+++.|+|||+||.++..++.+.|++++.++++.+..+..
T Consensus 90 ~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 90 RVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 333445555555544 335677899999999999999999999999999999998876654
No 110
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.43 E-value=3.8e-12 Score=96.69 Aligned_cols=182 Identities=20% Similarity=0.214 Sum_probs=74.9
Q ss_pred CccEEEEEecCCCC---CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDS---GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|||+.|.+.. -.....+++.+...+|.++.+.+..+ ..| | ...++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSS-------y~G-----~--------------G~~SL~~ 85 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSS-------YSG-----W--------------GTSSLDR 85 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGG-------BTT-----S---------------S--HHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCc-------cCC-----c--------------Ccchhhh
Confidence 66789999998853 23344588889888999998887632 112 2 2345566
Q ss_pred HHHHHHHHHHHHHHcC---CCCCcEEEEEeChhHHHHHHHHHhcC-----CCcceEEEeccCCCCcch---------hhh
Q 025550 115 AVRNVHAMIDKEVAAG---IDPNNVFVCGFSQGGALTLASVLLYP-----RKLGGGAIFSGWVPFNAS---------LID 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~~~~~~i~~~~~~~~~~~---------~~~ 177 (251)
.+++|.++++.+.... ...++|+|+|||-|+.-++.++.... ..+.++|+.+|..+.... +.+
T Consensus 86 D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~ 165 (303)
T PF08538_consen 86 DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEE 165 (303)
T ss_dssp HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHH
T ss_pred HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHH
Confidence 6666666666665331 25789999999999999999887753 469999999884432110 000
Q ss_pred h-------------------------h-----c----------------------c-------cCCCCCEEEEccCCCCc
Q 025550 178 Q-------------------------F-----T----------------------S-------DAKKTPILWSHGMADRT 198 (251)
Q Consensus 178 ~-------------------------~-----~----------------------~-------~~~~~p~l~~~g~~D~~ 198 (251)
. . . . ..+..|+|++.+++|+.
T Consensus 166 ~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEy 245 (303)
T PF08538_consen 166 LVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-
T ss_pred HHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCce
Confidence 0 0 0 0 13678999999999999
Q ss_pred ccch-hcccchHHHHhcCC----eeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 199 VLFE-AGQAGPPFLEQAGI----SCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 199 ~~~~-~~~~~~~~l~~~~~----~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+|.. +.+++.++++++-. ...--++||++|.+..+..+...+||.++
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~r 297 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVER 297 (303)
T ss_dssp ----------------------------------------------------
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9863 34456666665422 22345789999999866655544554443
No 111
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.41 E-value=2.8e-12 Score=103.97 Aligned_cols=214 Identities=15% Similarity=0.167 Sum_probs=147.0
Q ss_pred eEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCC--CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 9 LFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGD--SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.+...+.++..+..|++. ... +.+ +.|++|+--|+-. .-..|......+.++|...+.-..||.
T Consensus 396 Q~~atSkDGT~IPYFiv~--K~~--~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGG--------- 461 (648)
T COG1505 396 QFFATSKDGTRIPYFIVR--KGA--KKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGG--------- 461 (648)
T ss_pred EEEEEcCCCccccEEEEe--cCC--cCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccC---------
Confidence 345667888888877775 222 123 5677665554332 223455555777778888888888865
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
|+-++.|...... ..-++..++..++.+.+++.++ .++++++.|-|.||.++..+..++|+.+.++++-
T Consensus 462 GEfGp~WH~Aa~k----------~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e 531 (648)
T COG1505 462 GEFGPEWHQAGMK----------ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE 531 (648)
T ss_pred CccCHHHHHHHhh----------hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeec
Confidence 3445677543321 2223334455555555555565 6789999999999999999999999999999987
Q ss_pred ccCCCCcch-----------------------------hhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 166 SGWVPFNAS-----------------------------LIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 166 ~~~~~~~~~-----------------------------~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
.|.+++-.- ..+.+++...-.|+|+..+.+|..|.+.++++++.+|++.+.
T Consensus 532 vPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~ 611 (648)
T COG1505 532 VPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA 611 (648)
T ss_pred cchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC
Confidence 774432110 011222335678999999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCC------HHHHHHHHHHHHHhh
Q 025550 217 SCEFKAYPGLGHSIS------NEELRNLESWIKTRM 246 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l 246 (251)
++-+.+-.++||.-. .++...+..||.+.|
T Consensus 612 pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 612 PVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred ceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 988888888899754 233566777887766
No 112
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.40 E-value=3.2e-12 Score=90.16 Aligned_cols=178 Identities=12% Similarity=0.121 Sum_probs=117.9
Q ss_pred CCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
....+++||+||+-....+ -...+....+.||++.+++|-.++.. ..+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~-----------------------------htL 114 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQV-----------------------------HTL 114 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCccc-----------------------------ccH
Confidence 3456899999997644333 33356677789999999998655431 123
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcchhhhh-------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNASLIDQ------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~~~~~~------------- 178 (251)
.+.+.++..-++.+++.--..+++.+.|||.|+.+++.+..+. ..++.|+++++|.....+-....
T Consensus 115 ~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 115 EQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 3333333333333332333567899999999999999887763 34699999999866432211000
Q ss_pred ------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhh
Q 025550 179 ------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRM 246 (251)
Q Consensus 179 ------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l 246 (251)
..-...+.|++++.+++|..--.++.+.+...++++ .+..|++.+|.-..++ -.+...|+++.+
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc----ceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 011247789999999999877788888999988874 8889999999754333 234556666554
No 113
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.40 E-value=1.5e-11 Score=99.24 Aligned_cols=114 Identities=14% Similarity=0.115 Sum_probs=77.9
Q ss_pred CCCccEEEEEecCCCCC--CCchh-hhhhhc--CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSG--PANEP-IKTLFT--SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
+...|++|++||++.+. ..|.. +++.+. ...+.++++|+++++.... .....
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y-----------------------~~a~~ 94 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY-----------------------PTSAA 94 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC-----------------------ccccc
Confidence 35679999999998754 34554 555432 2369999999997643210 00111
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
......+.+.++++.+. ..+++.+++.|+||||||.++..++...|+++..++++.|..+..
T Consensus 95 ~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 95 YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTF 157 (442)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCcc
Confidence 11223344445555443 345677899999999999999999999999999999999876643
No 114
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.40 E-value=7.9e-13 Score=102.85 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=85.0
Q ss_pred CCCccEEEEEecCCCCCCC--------------c----hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcccccc
Q 025550 36 PMARNFILWLHGLGDSGPA--------------N----EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~--------------~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~ 97 (251)
..+.|+||++||-|+.++. + ..++..|+++||.++++|.++.+++........
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~--------- 182 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQ--------- 182 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTT---------
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccccc---------
Confidence 5788999999997643211 1 114668999999999999987766422110000
Q ss_pred CCCCCCCCCCChhHHHHH------------HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 98 EIPVTASSPKDESSLLKA------------VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~------------~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
....+...+... .-+....++.+. +..+|.+||+++|+||||..++.+++..+ +|++.++
T Consensus 183 ------~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~ 255 (390)
T PF12715_consen 183 ------GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVA 255 (390)
T ss_dssp ------TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEE
T ss_pred ------ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhh
Confidence 000011111110 111223444444 67789999999999999999999998887 5777764
Q ss_pred eccCCCCcchh---------------hh----------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHh
Q 025550 165 FSGWVPFNASL---------------ID----------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213 (251)
Q Consensus 165 ~~~~~~~~~~~---------------~~----------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~ 213 (251)
. +++....+. .. .+.......|+++..|..|..++. .+..++...
T Consensus 256 ~-~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~- 331 (390)
T PF12715_consen 256 N-GYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMG- 331 (390)
T ss_dssp E-S-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-
T ss_pred h-hhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhcC-
Confidence 3 333211110 00 011123678999999999998764 233333322
Q ss_pred cCCeeEEEEeCC
Q 025550 214 AGISCEFKAYPG 225 (251)
Q Consensus 214 ~~~~~~~~~~~g 225 (251)
+..+++++.||+
T Consensus 332 ~p~n~~~~~~p~ 343 (390)
T PF12715_consen 332 APDNFQIHHYPK 343 (390)
T ss_dssp -GGGEEE---GG
T ss_pred CCcceEEeeccc
Confidence 233488888886
No 115
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.39 E-value=7.8e-12 Score=96.81 Aligned_cols=67 Identities=25% Similarity=0.344 Sum_probs=60.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcC-CeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhcCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG-ISCEFKAYPGLGHSIS-NEELRNLESWIKTRMSCSS 250 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 250 (251)
.+.|+++.+|..|.++|....+++++++.+.| .+++++.+++.+|... .......++||.+++..++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 47899999999999999999999999999999 7999999999999765 4557889999999998765
No 116
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.38 E-value=2e-11 Score=94.30 Aligned_cols=170 Identities=17% Similarity=0.177 Sum_probs=109.4
Q ss_pred CCCCCccEEEEEecCCCCCCCchhh----------hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPI----------KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA 103 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~ 103 (251)
+...+.|+||..|+++......... ...|.++||.++.+|.|+.+.+. ..|...
T Consensus 15 ~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~---------G~~~~~------- 78 (272)
T PF02129_consen 15 DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE---------GEFDPM------- 78 (272)
T ss_dssp TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS----------S-B-TT-------
T ss_pred CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC---------CccccC-------
Confidence 4677899999999999543111111 11288999999999999875532 222110
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh------
Q 025550 104 SSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------ 177 (251)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------ 177 (251)
...+..|..++++++. .......+|+++|.|++|..++.+|...|..+++++..++..+.......
T Consensus 79 -~~~e~~D~~d~I~W~~-------~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~ 150 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIA-------AQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFR 150 (272)
T ss_dssp -SHHHHHHHHHHHHHHH-------HCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEB
T ss_pred -ChhHHHHHHHHHHHHH-------hCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccc
Confidence 0122334444444443 33455679999999999999999999888899999998875543321000
Q ss_pred -----hh-----------------------------------------------------------------cccCCCCC
Q 025550 178 -----QF-----------------------------------------------------------------TSDAKKTP 187 (251)
Q Consensus 178 -----~~-----------------------------------------------------------------~~~~~~~p 187 (251)
.. ...++++|
T Consensus 151 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP 230 (272)
T PF02129_consen 151 LGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP 230 (272)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE
T ss_pred ccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC
Confidence 00 01258899
Q ss_pred EEEEccCCCCcccchhcccchHHHHhcC-CeeEEEEeCCCCCC
Q 025550 188 ILWSHGMADRTVLFEAGQAGPPFLEQAG-ISCEFKAYPGLGHS 229 (251)
Q Consensus 188 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~g~~H~ 229 (251)
+|++.|..|..+. ..+...++.+++.+ .+.++++-|. +|.
T Consensus 231 ~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 231 VLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred EEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 9999999996666 67777888998887 6778998886 785
No 117
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.37 E-value=2e-10 Score=90.44 Aligned_cols=184 Identities=15% Similarity=0.137 Sum_probs=114.4
Q ss_pred CCCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
....|+||++||..+++.. | +.++...++.||.++++..+|++....++..= |. -...+|+.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~------f~----------ag~t~Dl~ 185 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL------FT----------AGWTEDLR 185 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce------ee----------cCCHHHHH
Confidence 4577999999997765443 3 33777888999999999999876654443211 11 11234444
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCC--cchhhhh---------h
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPF--NASLIDQ---------F 179 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~--~~~~~~~---------~ 179 (251)
.+++.++. ..+..++..+|+||||.+.+.+..+..+ ..+|++..+||-.. ...+... +
T Consensus 186 ~~v~~i~~--------~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l 257 (409)
T KOG1838|consen 186 EVVNHIKK--------RYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRAL 257 (409)
T ss_pred HHHHHHHH--------hCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHH
Confidence 44444432 3355689999999999999988877543 35555655665431 1100000 0
Q ss_pred -----------------------------------------------------------cccCCCCCEEEEccCCCCccc
Q 025550 180 -----------------------------------------------------------TSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 180 -----------------------------------------------------------~~~~~~~p~l~~~g~~D~~~~ 200 (251)
...++++|++.+++.+|+++|
T Consensus 258 ~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p 337 (409)
T KOG1838|consen 258 TLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVP 337 (409)
T ss_pred HHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCC
Confidence 012589999999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCH--------HHHHH-HHHHHHHhh
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--------EELRN-LESWIKTRM 246 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--------~~~~~-~~~~l~~~l 246 (251)
.+. .-.+..++ +..+-+.+-.-+||.-+. ...++ +.+|+....
T Consensus 338 ~~~--ip~~~~~~-np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 338 EEA--IPIDDIKS-NPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccc--CCHHHHhc-CCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 762 22334444 345666666767994221 12455 666666554
No 118
>COG0627 Predicted esterase [General function prediction only]
Probab=99.35 E-value=7e-11 Score=91.65 Aligned_cols=208 Identities=19% Similarity=0.204 Sum_probs=127.2
Q ss_pred CCCccEEEEEecCCCCCCCchhhhh---hhcCCCcceEEEEcc-CCCCCCccc--CCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKT---LFTSPEFKLTKWSFP-SAPNNPVTC--NYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~---~~~~~g~~~~~~~~~-~~~~~~~~~--~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+++++||..++...+..+.. .....|+.++..|.. .......+. ..| ...+||....+..-...+.+.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G-~~~sfY~d~~~~~~~~~~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLG-GGASFYSDWTQPPWASGPYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCC-CccceecccccCccccCccch
Confidence 5788999999999988755544333 333445544443211 111111110 001 112333322221000111222
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCC--CcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDP--NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------- 178 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------- 178 (251)
+++ .+.+|...+.+ ....+. ++.+|+||||||+-|+.+|+++|++++.+.+++|.+.........
T Consensus 130 ~tf--l~~ELP~~~~~--~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~ 205 (316)
T COG0627 130 ETF--LTQELPALWEA--AFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGG 205 (316)
T ss_pred hHH--HHhhhhHHHHH--hcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccC
Confidence 222 23345444442 233333 378999999999999999999999999999999977655111000
Q ss_pred -----------------------h---cccC---------CCCCEEEEccCCCCccc--chhcccchHHHHhcCCeeEEE
Q 025550 179 -----------------------F---TSDA---------KKTPILWSHGMADRTVL--FEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 179 -----------------------~---~~~~---------~~~p~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~ 221 (251)
. .... ...++++-+|..|.+.. ....+.+.+++++.|.+.++.
T Consensus 206 ~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 206 KAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred ccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 0 0011 44678888999998764 344678899999999998988
Q ss_pred EeCCCCCCC--CHHHHHHHHHHHHHhhcC
Q 025550 222 AYPGLGHSI--SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 222 ~~~g~~H~~--~~~~~~~~~~~l~~~l~~ 248 (251)
..++.+|.+ ....+++...|+.+.|..
T Consensus 286 ~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 286 DQPGGDHSWYFWASQLADHLPWLAGALGL 314 (316)
T ss_pred eCCCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 888889975 477899999999998864
No 119
>PRK04940 hypothetical protein; Provisional
Probab=99.34 E-value=1.8e-10 Score=81.33 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc---------c----
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT---------S---- 181 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~---------~---- 181 (251)
+++.+.+.+..+...+. .++++|+|.|+||+.|.+++.++. +++|+ +.|.+.+...+...+. .
T Consensus 42 a~~~l~~~i~~~~~~~~-~~~~~liGSSLGGyyA~~La~~~g--~~aVL-iNPAv~P~~~L~~~ig~~~~y~~~~~~h~~ 117 (180)
T PRK04940 42 DMQHLLKEVDKMLQLSD-DERPLICGVGLGGYWAERIGFLCG--IRQVI-FNPNLFPEENMEGKIDRPEEYADIATKCVT 117 (180)
T ss_pred HHHHHHHHHHHhhhccC-CCCcEEEEeChHHHHHHHHHHHHC--CCEEE-ECCCCChHHHHHHHhCCCcchhhhhHHHHH
Confidence 34455555543221111 247999999999999999999986 56555 7776655432222111 0
Q ss_pred ---cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 182 ---DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 182 ---~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
....-..+++..+.|++.++..+ .+.+.. -.+.++.+|++|.|. .+..+.|.+|+.
T Consensus 118 eL~~~~p~r~~vllq~gDEvLDyr~a---~~~y~~---~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 118 NFREKNRDRCLVILSRNDEVLDSQRT---AEELHP---YYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred HhhhcCcccEEEEEeCCCcccCHHHH---HHHhcc---CceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 12344568999999999987743 344433 125788999999986 556788998874
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.32 E-value=6.5e-11 Score=89.18 Aligned_cols=196 Identities=13% Similarity=0.076 Sum_probs=117.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhc-CCCcceE--EEEccCCCCCCcccCCCC-cCCccccccCCCCCCCCCCCh-hHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFT-SPEFKLT--KWSFPSAPNNPVTCNYGA-VMPSWFDIHEIPVTASSPKDE-SSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~g~-~~~~w~~~~~~~~~~~~~~~~-~~~ 112 (251)
..-..||+||++++...+..+++.+. +.|...- .+..-..+.. .. .|. ....-.+... ....... .+.
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v--~~-~G~~~~~~~nPiIq----V~F~~n~~~~~ 82 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKV--KV-SGKLSKNAKNPIIQ----VNFEDNRNANY 82 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEE--EE-ES---TT-SS-EEE----EEESSTT-CHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeE--EE-eeecCCCCCCCEEE----EEecCCCcCCH
Confidence 44568999999999999999999886 6666442 2222111110 00 010 0000000000 0012222 578
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcchh-----------
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNASL----------- 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~~----------- 175 (251)
.....++..++..+. +++ -+++-++||||||..+..++..+.. .+..+|.+++.+......
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 888999999998886 445 4699999999999999998887532 478888888855432111
Q ss_pred ---------hhhh-----cccCCCCCEEEEccC------CCCcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCCH-
Q 025550 176 ---------IDQF-----TSDAKKTPILWSHGM------ADRTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSISN- 232 (251)
Q Consensus 176 ---------~~~~-----~~~~~~~p~l~~~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~~- 232 (251)
...+ ..-.....+|-+.|+ .|..||...++.+...++.....++-.+++| +.|.--.
T Consensus 161 ~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lhe 240 (255)
T PF06028_consen 161 NGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHE 240 (255)
T ss_dssp T-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGC
T ss_pred cCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCC
Confidence 0011 112356789999998 7999999999988888888767788888876 4686432
Q ss_pred --HHHHHHHHHH
Q 025550 233 --EELRNLESWI 242 (251)
Q Consensus 233 --~~~~~~~~~l 242 (251)
+..+.|.+||
T Consensus 241 N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 NPQVDKLIIQFL 252 (255)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 2234444444
No 121
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.30 E-value=8.6e-11 Score=88.45 Aligned_cols=176 Identities=16% Similarity=0.179 Sum_probs=105.0
Q ss_pred CCCCccEEEEEecCC--CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLG--DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...++|++++.||-. .+..-++.+...+.+....-.++...+..+. ...+ ..........
T Consensus 94 ~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~---------~~R~---------~~~~~n~~~~ 155 (299)
T COG2382 94 PLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDV---------KKRR---------EELHCNEAYW 155 (299)
T ss_pred ccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCH---------HHHH---------HHhcccHHHH
Confidence 557899999999843 3344444455556555555554444322110 0000 0001223334
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----------hhhhccc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL----------IDQFTSD 182 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~----------~~~~~~~ 182 (251)
....++|...++......-+.+.-+|+|.|+||.+++++++.+|+.|..|++.||........ .......
T Consensus 156 ~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~ 235 (299)
T COG2382 156 RFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAI 235 (299)
T ss_pred HHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhcc
Confidence 444555555555432111245677999999999999999999999999999999966533211 1111111
Q ss_pred CCCCCEEEEcc-CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 183 AKKTPILWSHG-MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 183 ~~~~p~l~~~g-~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.....+.+..| +.+.+++ ..+++++.|++.+.++.+.+|+| ||.+.
T Consensus 236 ~~~~~~~l~~g~~~~~~~~--pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 236 GTDERIVLTTGGEEGDFLR--PNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred CccceEEeecCCccccccc--hhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 11222333333 3344444 44579999999999999999998 99764
No 122
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.29 E-value=1.6e-10 Score=79.88 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=81.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------hhhc
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI-------DQFT 180 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~-------~~~~ 180 (251)
+...+.+.++.+.+.+.. -.++++|++||+|+..+..++.+....++|+++++|.-....... ....
T Consensus 39 ~~P~~~dWi~~l~~~v~a------~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p 112 (181)
T COG3545 39 EAPVLDDWIARLEKEVNA------AEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIP 112 (181)
T ss_pred CCCCHHHHHHHHHHHHhc------cCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCc
Confidence 344555556666665542 245699999999999999999887778999999999664332211 1222
Q ss_pred ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.....-|.+++...+|+.++++.++.+.+.+.. .++....+||..
T Consensus 113 ~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GHiN 157 (181)
T COG3545 113 REPLPFPSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGHIN 157 (181)
T ss_pred cccCCCceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccccc
Confidence 344677999999999999999998888888866 566666677754
No 123
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.28 E-value=1.6e-10 Score=86.98 Aligned_cols=177 Identities=12% Similarity=0.171 Sum_probs=112.4
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|+++|+.+++...|..+++.+....+.++.+.+|+.... .....++.+.++..
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~-------------------------~~~~~si~~la~~y 55 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD-------------------------EPPPDSIEELASRY 55 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT-------------------------SHEESSHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC-------------------------CCCCCCHHHHHHHH
Confidence 46899999999999999999988755477777777754210 12234555556666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcchhh-------h----h-------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNASLI-------D----Q------- 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~~~~-------~----~------- 178 (251)
.+.|.. .. +..++.|+|||+||.+|+.+|.+. ...+..++++.++.+...... . .
T Consensus 56 ~~~I~~---~~-~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (229)
T PF00975_consen 56 AEAIRA---RQ-PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGT 131 (229)
T ss_dssp HHHHHH---HT-SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHH
T ss_pred HHHhhh---hC-CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCC
Confidence 555553 22 334899999999999999999764 334788888887655321000 0 0
Q ss_pred ---------------------------hcccC---CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 179 ---------------------------FTSDA---KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 179 ---------------------------~~~~~---~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
..... ...|..+.....|.......-....++-+-....++++.++| +|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H 210 (229)
T PF00975_consen 132 PDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DH 210 (229)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ET
T ss_pred chhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CC
Confidence 00001 134678888888877654422222223333345688999997 99
Q ss_pred CCCH-HHHHHHHHHHHHhh
Q 025550 229 SISN-EELRNLESWIKTRM 246 (251)
Q Consensus 229 ~~~~-~~~~~~~~~l~~~l 246 (251)
.... +...++.+.|.+.|
T Consensus 211 ~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 211 FSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TGHHSTTHHHHHHHHHHHH
T ss_pred cEecchHHHHHHHHHhccC
Confidence 7644 46777777777654
No 124
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.28 E-value=5e-11 Score=84.56 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=108.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC-CCCCCh
Q 025550 34 QNPMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA-SSPKDE 109 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~-~~~~~~ 109 (251)
+.+++.|+++++-|...+..++.. +.+....+|+.++.+|- ..+..... |. ..+|.--...+-.. ......
T Consensus 39 ~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDT---SPRG~~v~-g~-~eswDFG~GAGFYvnAt~epw 113 (283)
T KOG3101|consen 39 PRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDT---SPRGVEVA-GD-DESWDFGQGAGFYVNATQEPW 113 (283)
T ss_pred ccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCC---CCCccccC-CC-cccccccCCceeEEecccchH
Confidence 355668999999999999888766 23344456766655543 22222211 11 12331100000000 001112
Q ss_pred hHHHHHHHHHHHHHHHHH---HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------
Q 025550 110 SSLLKAVRNVHAMIDKEV---AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------ 174 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------ 174 (251)
..-.++.+++.+-+..++ ...+|..+++|.||||||.-|+-.++++|.+++.+-+++|...+..-
T Consensus 114 ~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG 193 (283)
T KOG3101|consen 114 AKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLG 193 (283)
T ss_pred hhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccC
Confidence 222233333333333222 23468889999999999999999999999998888877774432110
Q ss_pred ----hhhhhc-------ccCCCCCEEEEccCCCCcccchh-cccchHHHHhc-CCeeEEEEeCCCCCCCC
Q 025550 175 ----LIDQFT-------SDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQA-GISCEFKAYPGLGHSIS 231 (251)
Q Consensus 175 ----~~~~~~-------~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~-~~~~~~~~~~g~~H~~~ 231 (251)
..+.+. -.....-+|+-.|+.|.+..-+. -+.+.++.+.. ..++.++..+|-+|.+.
T Consensus 194 ~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 194 DNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred CChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 011110 12245669999999999877221 11233333322 25688889999999754
No 125
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.27 E-value=6.9e-11 Score=91.53 Aligned_cols=178 Identities=15% Similarity=0.138 Sum_probs=106.8
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC-CCC---cCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN-YGA---VMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~g~---~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+|++-||.|+...+|..+++.+++.||.|..++.|+.-....+.. .|. ....|+ ....++
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~------------erp~di 136 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWW------------ERPLDI 136 (365)
T ss_pred CcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhh------------cccccH
Confidence 4789999999999999999999999999999999999886422111110 010 111121 123344
Q ss_pred HHHHHHHHHHHHHH-HHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----------------------------------
Q 025550 113 LKAVRNVHAMIDKE-VAAGIDPNNVFVCGFSQGGALTLASVLLYPR---------------------------------- 157 (251)
Q Consensus 113 ~~~~~~l~~~i~~~-~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---------------------------------- 157 (251)
...++.|.+.-..= ++..++.++|+++|||+||+.++.++....+
T Consensus 137 s~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~ 216 (365)
T COG4188 137 SALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWL 216 (365)
T ss_pred HHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhcccccccc
Confidence 44444444330000 1345688999999999999999987754321
Q ss_pred ----------CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhc-ccchHHHHhcCCeeEEEEeCCC
Q 025550 158 ----------KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAG-QAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 158 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
++++++.+.|.....-. .....+.+.|++++.|..|...|...- ..-...+. +....+.+.+++
T Consensus 217 ~~~~~~~rDpriravvA~~p~~~~~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~--g~~k~~~~vp~a 291 (365)
T COG4188 217 PRQAYDLRDPRIRAVVAINPALGMIFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLP--GALKYLRLVPGA 291 (365)
T ss_pred chhhhccccccceeeeeccCCcccccc---cccceeeecceeeecccccccCCcccccccccccCC--cchhheeecCCC
Confidence 12333333332221111 111235789999999999997665431 22222232 233567788999
Q ss_pred CCCCC
Q 025550 227 GHSIS 231 (251)
Q Consensus 227 ~H~~~ 231 (251)
.|.-.
T Consensus 292 ~h~sf 296 (365)
T COG4188 292 THFSF 296 (365)
T ss_pred ccccc
Confidence 99654
No 126
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.26 E-value=1.2e-10 Score=95.87 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=107.2
Q ss_pred CCCccEEEEEecCCCCCCCc-----hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSGPAN-----EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
...+..||+++.+-.....+ +.+++++.++|+.++.++..... ...+.| ..+
T Consensus 212 ~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~---------~~~r~~--------------~ld 268 (560)
T TIGR01839 212 QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPD---------KAHREW--------------GLS 268 (560)
T ss_pred CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCC---------hhhcCC--------------CHH
Confidence 34455677788765322222 34888999999999999987421 111111 223
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHH----HHHhcCC-CcceEEEeccCCCCcchh----------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLA----SVLLYPR-KLGGGAIFSGWVPFNASL---------- 175 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~p~-~~~~~i~~~~~~~~~~~~---------- 175 (251)
++ ++.+.+.++... .....++|.++|+|+||.++.. ++++.++ +++.++++...+++...-
T Consensus 269 DY---v~~i~~Ald~V~-~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~ 344 (560)
T TIGR01839 269 TY---VDALKEAVDAVR-AITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQT 344 (560)
T ss_pred HH---HHHHHHHHHHHH-HhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHH
Confidence 33 334555554432 2235678999999999999986 6777775 799998887755543210
Q ss_pred h---hh-h------------------------------------------------------------------------
Q 025550 176 I---DQ-F------------------------------------------------------------------------ 179 (251)
Q Consensus 176 ~---~~-~------------------------------------------------------------------------ 179 (251)
. +. .
T Consensus 345 ~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~ 424 (560)
T TIGR01839 345 LEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTR 424 (560)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCC
Confidence 0 00 0
Q ss_pred -----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 180 -----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 180 -----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
...++++|++++.|+.|.++|.+.+..+.+.+. .+++++..++ ||.
T Consensus 425 pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g---s~~~fvl~~g-GHI 481 (560)
T TIGR01839 425 PDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG---GKRRFVLSNS-GHI 481 (560)
T ss_pred CCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC---CCeEEEecCC-Ccc
Confidence 002589999999999999999998877766553 3689998886 883
No 127
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.26 E-value=3.3e-09 Score=78.99 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccC--C-CCCEEEE
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDA--K-KTPILWS 191 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~--~-~~p~l~~ 191 (251)
..+.++.+|++ ++.++.++.+|+|||+||.+++.+...+|+.+...+++||.+-......-...... . ..++.+.
T Consensus 120 L~~~lkP~Ie~--~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~ 197 (264)
T COG2819 120 LTEQLKPFIEA--RYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLY 197 (264)
T ss_pred HHHhhHHHHhc--ccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEE
Confidence 34455555553 46778889999999999999999999999999999999996654433221111110 1 3345555
Q ss_pred ccCC--CC---ccc---chhcccchHHHHh-cCCeeEEEEeCCCCCCCC-HHHHHHHHHHHH
Q 025550 192 HGMA--DR---TVL---FEAGQAGPPFLEQ-AGISCEFKAYPGLGHSIS-NEELRNLESWIK 243 (251)
Q Consensus 192 ~g~~--D~---~~~---~~~~~~~~~~l~~-~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~ 243 (251)
.|.. |. ... .+.+.+..+.+++ .|....+..+++.+|.-. ...+.....|+.
T Consensus 198 iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~~~~~~~~al~~l~ 259 (264)
T COG2819 198 IGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSVIHASLPSALRFLD 259 (264)
T ss_pred ecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccchHHHHHHHHHHhhh
Confidence 4443 33 211 1233444555555 678889999998888643 445566666553
No 128
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.24 E-value=5.6e-10 Score=85.06 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=110.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.|.++++||++++...|......+... .|.++.+|.|+++.+. . . .......+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-----------~------------~--~~~~~~~~ 75 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-----------P------------A--GYSLSAYA 75 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-----------c------------c--cccHHHHH
Confidence 459999999999888887732222211 1899999999765531 0 0 01111114
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC------------Cc------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP------------FN------------ 172 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~------------~~------------ 172 (251)
..+..+++ ..+. .++.++|||+||.++..++.++|+.+++++.+++... ..
T Consensus 76 ~~~~~~~~---~~~~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T COG0596 76 DDLAALLD---ALGL--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLG 150 (282)
T ss_pred HHHHHHHH---HhCC--CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhc
Confidence 55555555 3333 3499999999999999999999999999998885321 00
Q ss_pred ----------------chhhh-----hhc-------------------------------------ccCCCCCEEEEccC
Q 025550 173 ----------------ASLID-----QFT-------------------------------------SDAKKTPILWSHGM 194 (251)
Q Consensus 173 ----------------~~~~~-----~~~-------------------------------------~~~~~~p~l~~~g~ 194 (251)
..... ... .....+|+++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 151 LDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred cchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecC
Confidence 00000 000 01256999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
.|...+......+.+.+.. ..++.++++.+|....+..+.+.+.+.+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAELARRLAAALPN---DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC---CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 9965554432222222221 4688999999999987777666666655
No 129
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.21 E-value=3e-10 Score=83.50 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=109.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
......|+|+|+||+.-....|.++...++++||.+++.++-..- + .....+.++..
T Consensus 41 ~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--------~---------------p~~~~Ei~~aa 97 (307)
T PF07224_consen 41 SEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--------P---------------PDGQDEIKSAA 97 (307)
T ss_pred CcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--------C---------------CCchHHHHHHH
Confidence 345689999999999988888888999999999999987753210 0 01123346666
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEeccCCCCcchh---hhh--h--ccc
Q 025550 114 KAVRNVHAMIDKEVAAG--IDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSGWVPFNASL---IDQ--F--TSD 182 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~~~~~~~~~---~~~--~--~~~ 182 (251)
..++|+..-++..+..+ .+..+++++|||.||..|..+|+.+. -.+.++|.+.|.......- ... + ..-
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~SF 177 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVPQSF 177 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCCccc
Confidence 77777777776655333 35679999999999999999998774 2378888887755433211 000 1 111
Q ss_pred CCCCCEEEEccCCC----Cccc---chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 183 AKKTPILWSHGMAD----RTVL---FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 183 ~~~~p~l~~~g~~D----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
....|++++-..-- ...+ ++. ..-.+.+++...++-..+-.+.||.
T Consensus 178 ~l~iPv~VIGtGLg~~~~~~~~~CaP~g-vnH~eFf~eCk~p~~hfV~~dYGHm 230 (307)
T PF07224_consen 178 DLDIPVLVIGTGLGPKRNPLFPPCAPDG-VNHEEFFNECKPPCAHFVAKDYGHM 230 (307)
T ss_pred ccCCceEEEecCcCccccCCCCCCCCCC-cCHHHHHHhhcccceeeeecccccc
Confidence 35689988654332 1222 111 1223444444446555556667884
No 130
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=7.6e-10 Score=90.71 Aligned_cols=194 Identities=13% Similarity=0.110 Sum_probs=129.2
Q ss_pred CCCccEEEEEecCCCC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..++|.+++.+|+-+- ...|+.-..-|.+.|+.....+.||. |.-+.+|...... ....+...|+.
T Consensus 467 dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG---------Ge~G~~WHk~G~l---akKqN~f~Dfi 534 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG---------GEYGEQWHKDGRL---AKKQNSFDDFI 534 (712)
T ss_pred cCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC---------cccccchhhccch---hhhcccHHHHH
Confidence 4577888877775432 23344433345568887777788765 5556778643321 22333445554
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------------- 178 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------------- 178 (251)
.+++.|.+ +.-..+++.++.|.|.||.++..++.++|+.++++++--|+++.-......
T Consensus 535 a~AeyLve------~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p 608 (712)
T KOG2237|consen 535 ACAEYLVE------NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNP 608 (712)
T ss_pred HHHHHHHH------cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCCh
Confidence 44444433 333467899999999999999999999999999999988866543221100
Q ss_pred -----------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC-------CeeEEEEeCCCCCCCC---
Q 025550 179 -----------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG-------ISCEFKAYPGLGHSIS--- 231 (251)
Q Consensus 179 -----------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~g~~H~~~--- 231 (251)
......-.-+++..+++|..|.+..+.++.++|+..- .++-+.+..++||..-
T Consensus 609 ~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~ 688 (712)
T KOG2237|consen 609 EDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPR 688 (712)
T ss_pred hhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCch
Confidence 0011134678899999999999988888888888751 3466788899999763
Q ss_pred ---HHHHHHHHHHHHHhhc
Q 025550 232 ---NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 ---~~~~~~~~~~l~~~l~ 247 (251)
.++.....+||.+.+.
T Consensus 689 ~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 689 FKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3445667778877664
No 131
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.15 E-value=1.7e-09 Score=78.76 Aligned_cols=185 Identities=12% Similarity=0.093 Sum_probs=101.2
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..|-..|... ...+++.||+..|++..-.+|..++.+++.+||+++++|--.+- |.+.
T Consensus 10 ~~~~~I~vwet~P~~~----~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~Hv--------GlSs---- 73 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNN----EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHV--------GLSS---- 73 (294)
T ss_dssp TTTEEEEEEEE---TT----S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B------------------
T ss_pred CCCCEEEEeccCCCCC----CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccc--------cCCC----
Confidence 4556766665553322 23456899999999999999999999999999999999965331 2111
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
+.-++-.+....+.+..+++.+.+.+ ..+++|+.-|.-|.+|+..+.+- .+.-+|..-|.......
T Consensus 74 ----------G~I~eftms~g~~sL~~V~dwl~~~g--~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~T 139 (294)
T PF02273_consen 74 ----------GDINEFTMSIGKASLLTVIDWLATRG--IRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDT 139 (294)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHTT-----EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHH
T ss_pred ----------CChhhcchHHhHHHHHHHHHHHHhcC--CCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHH
Confidence 12234445555566666666554555 45799999999999999988743 35555655564443222
Q ss_pred hhhhh---------------------------------------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 LIDQF---------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 ~~~~~---------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
+...+ ..+...+|++.+++++|..|......++.+
T Consensus 140 Le~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~ 219 (294)
T PF02273_consen 140 LEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLD 219 (294)
T ss_dssp HHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHT
T ss_pred HHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHH
Confidence 11110 013478999999999999998876555554
Q ss_pred HHHhcCCeeEEEEeCCCCCCCC
Q 025550 210 FLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.+.. ..+++..++|..|.+.
T Consensus 220 ~~~s--~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 220 NINS--NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp T-TT----EEEEEETT-SS-TT
T ss_pred hcCC--CceeEEEecCccchhh
Confidence 4443 3588999999999875
No 132
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=4e-09 Score=81.78 Aligned_cols=116 Identities=22% Similarity=0.261 Sum_probs=72.9
Q ss_pred CCCCccEEEEEecCCCCCCCc-----------hhhhh---hhcCCCcceEEEEccCCCCC---CcccCCCCcCCcccccc
Q 025550 35 NPMARNFILWLHGLGDSGPAN-----------EPIKT---LFTSPEFKLTKWSFPSAPNN---PVTCNYGAVMPSWFDIH 97 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~-----------~~~~~---~~~~~g~~~~~~~~~~~~~~---~~~~~~g~~~~~w~~~~ 97 (251)
...+.++|+++|+.+++.... ..+.. .+.-..|-++..+..|++.. |.+...+ +..|
T Consensus 47 n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~--g~~y---- 120 (368)
T COG2021 47 NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG--GKPY---- 120 (368)
T ss_pred cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC--CCcc----
Confidence 335678999999999854332 22222 35556677888888776531 1111111 1111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
...-...++.+.+..-+.+++ ..++. ++ +++|-||||+.++.++..+|+++..++.+++
T Consensus 121 ------g~~FP~~ti~D~V~aq~~ll~---~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 121 ------GSDFPVITIRDMVRAQRLLLD---ALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred ------ccCCCcccHHHHHHHHHHHHH---hcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 111123445555555555555 45553 55 4999999999999999999999998888876
No 133
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.13 E-value=1.9e-09 Score=83.43 Aligned_cols=170 Identities=18% Similarity=0.145 Sum_probs=105.5
Q ss_pred CCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH--
Q 025550 37 MARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL-- 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~-- 112 (251)
+.+|+.|.+.|.|.+....+. ++..|.+.|+..+.+..|-.+.+. +..-.. ..-....|+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk---------P~~Q~~-------s~l~~VsDl~~ 153 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK---------PKDQRR-------SSLRNVSDLFV 153 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccC---------hhHhhc-------ccccchhHHHH
Confidence 468999999998887665555 477777789999999988554321 111000 001122222
Q ss_pred --HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC-------------cchhhh
Q 025550 113 --LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF-------------NASLID 177 (251)
Q Consensus 113 --~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~-------------~~~~~~ 177 (251)
...+.+.+.+++.+.+. ...+++|.|.||||.+|..++...|..+..+-.+++.... ...+..
T Consensus 154 ~g~~~i~E~~~Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~ 231 (348)
T PF09752_consen 154 MGRATILESRALLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEK 231 (348)
T ss_pred HHhHHHHHHHHHHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHH
Confidence 23344444444444334 4559999999999999999999999876655555442210 000000
Q ss_pred h--------------------------------------------------hcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 178 Q--------------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 178 ~--------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
. +........+.++.+++|..||......+
T Consensus 232 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~L 311 (348)
T PF09752_consen 232 QFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSL 311 (348)
T ss_pred HhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchH
Confidence 0 00112344678899999999998877666
Q ss_pred hHHHHhcCCeeEEEEeCCCCCC
Q 025550 208 PPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+.+.. .++..++| ||.
T Consensus 312 q~~WPG----sEvR~l~g-GHV 328 (348)
T PF09752_consen 312 QEIWPG----SEVRYLPG-GHV 328 (348)
T ss_pred HHhCCC----CeEEEecC-CcE
Confidence 555544 57777887 995
No 134
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.13 E-value=7.4e-09 Score=85.55 Aligned_cols=194 Identities=15% Similarity=0.179 Sum_probs=129.1
Q ss_pred CCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...+.|++++.-|.-+.. .+|....-.|.++|+...+.-.||. |+-++.|+..... ........|+
T Consensus 444 ~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG---------gelG~~WYe~GK~---l~K~NTf~DF 511 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG---------GELGRAWYEDGKL---LNKKNTFTDF 511 (682)
T ss_pred CCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc---------cccChHHHHhhhh---hhccccHHHH
Confidence 456778888877754432 3344333367789997766666644 5667889875442 3334455555
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh--------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ-------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~-------------- 178 (251)
.++++.|.+ +.-.+.++++++|-|.||++...++...|+.++++|+..|+.+......+.
T Consensus 512 Ia~a~~Lv~------~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGN 585 (682)
T COG1770 512 IAAARHLVK------EGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGN 585 (682)
T ss_pred HHHHHHHHH------cCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCC
Confidence 555555443 333467899999999999999999999999999999999977643322111
Q ss_pred ------------hc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe---eEEEEeCCCCCCCC------H
Q 025550 179 ------------FT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS---CEFKAYPGLGHSIS------N 232 (251)
Q Consensus 179 ------------~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~~H~~~------~ 232 (251)
++ ..+.-+++|+..|.+|+.|.+-...++..+|++.+.+ +=+..--.+||.-. .
T Consensus 586 P~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~l 665 (682)
T COG1770 586 PLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRL 665 (682)
T ss_pred cCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHH
Confidence 00 1246689999999999999998888899999987554 33444345799532 2
Q ss_pred HHHHHHHHHHHHhh
Q 025550 233 EELRNLESWIKTRM 246 (251)
Q Consensus 233 ~~~~~~~~~l~~~l 246 (251)
++...-..|+...+
T Consensus 666 ee~A~eYaF~l~~~ 679 (682)
T COG1770 666 EEIAFEYAFLLKLA 679 (682)
T ss_pred HHHHHHHHHHhhhc
Confidence 23333445555544
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.13 E-value=2.1e-09 Score=76.15 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=103.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
-.+||+-|-|+-...-..+++.|+++|+.++.+|.+. +-| ...+.++...++
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~--------------Yfw--------------~~rtP~~~a~Dl 54 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLR--------------YFW--------------SERTPEQTAADL 54 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHH--------------HHh--------------hhCCHHHHHHHH
Confidence 3678888877766555568899999999999999641 111 123334445555
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCC------------Ccchh-----hhh
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVP------------FNASL-----IDQ 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~------------~~~~~-----~~~ 178 (251)
..+++... .....++++|+|+|+|+-+...+..+.|. +++.++++++... ....- ...
T Consensus 55 ~~~i~~y~-~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pe 133 (192)
T PF06057_consen 55 ARIIRHYR-ARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPE 133 (192)
T ss_pred HHHHHHHH-HHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHH
Confidence 55555543 12246799999999999888888877764 4778887776322 11111 111
Q ss_pred hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 179 ~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+ .+....|++-++|++|.-.... .++.. .++.+..|| ||.|..+ .+.+.+.|.+.++
T Consensus 134 i-~~l~~~~v~CiyG~~E~d~~cp-------~l~~~--~~~~i~lpG-gHHfd~d-y~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 I-AKLPPAPVQCIYGEDEDDSLCP-------SLRQP--GVEVIALPG-GHHFDGD-YDALAKRILDALK 190 (192)
T ss_pred H-HhCCCCeEEEEEcCCCCCCcCc-------cccCC--CcEEEEcCC-CcCCCCC-HHHHHHHHHHHHh
Confidence 1 1124468999999888653222 12222 468889998 8877644 4444444444443
No 136
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.10 E-value=6.2e-10 Score=95.47 Aligned_cols=111 Identities=13% Similarity=0.194 Sum_probs=74.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC-CC----Cc-CCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN-YG----AV-MPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~g----~~-~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..|+||++||++++...|..+++.|.+.||.++.+|+|+++.+..... .+ .. ...+++.... ......
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l------~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASL------LVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccc------cccccC
Confidence 457999999999999999999999998999999999999987632200 00 00 0001111100 111235
Q ss_pred HHHHHHHHHHHHHHHHH-----c------CCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 112 LLKAVRNVHAMIDKEVA-----A------GIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~-----~------~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.+.+.++..+...+.. . ..+..++.++||||||.++..++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 56666666666554420 1 1456799999999999999988875
No 137
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.07 E-value=7.6e-09 Score=79.31 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=80.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhc---CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFT---SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+.++++++|-.+--..|..+.+.+. ...+.++.+...|+...+...... ......++.+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~-----------------~~~~~~sL~~Q 64 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS-----------------PNGRLFSLQDQ 64 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-----------------CCCCccCHHHH
Confidence 5789999999998888888777555 357888888777664432110000 12344566666
Q ss_pred HHHHHHHHHHHHH-cCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCC
Q 025550 116 VRNVHAMIDKEVA-AGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWV 169 (251)
Q Consensus 116 ~~~l~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~ 169 (251)
++.-.+.+++... ......+++++|||.|+++++.++.+.+ ..+.+++++.|.+
T Consensus 65 I~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 65 IEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 7777777776552 2224578999999999999999999998 6688888887743
No 138
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.05 E-value=2.4e-08 Score=80.03 Aligned_cols=175 Identities=15% Similarity=0.161 Sum_probs=113.6
Q ss_pred cEEEEEecCCCCCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
|.|+++.-..+..... +.+++.|.+ |+.++..|.......+. ....-++.+.++.
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-----------------------~~~~f~ldDYi~~ 158 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-----------------------SAGKFDLEDYIDY 158 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-----------------------hcCCCCHHHHHHH
Confidence 5677777666433322 337778887 99999999865432110 0122334455667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcch---------------hhh-
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNAS---------------LID- 177 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~---------------~~~- 177 (251)
+.+.++.+ ..+ +.++|+|+||..++.+++.. |..++.++++.+.+++... +.+
T Consensus 159 l~~~i~~~-----G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~ 232 (406)
T TIGR01849 159 LIEFIRFL-----GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHN 232 (406)
T ss_pred HHHHHHHh-----CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHH
Confidence 77777632 334 89999999999977665553 5568999988886654321 000
Q ss_pred ---------------hhc--------------------------------------------------------------
Q 025550 178 ---------------QFT-------------------------------------------------------------- 180 (251)
Q Consensus 178 ---------------~~~-------------------------------------------------------------- 180 (251)
.+.
T Consensus 233 ~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~ 312 (406)
T TIGR01849 233 VIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDV 312 (406)
T ss_pred hhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHH
Confidence 000
Q ss_pred --------------------ccCCC-CCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--C-----C
Q 025550 181 --------------------SDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--I-----S 231 (251)
Q Consensus 181 --------------------~~~~~-~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~-----~ 231 (251)
..+++ +|++.+.|++|.++++.++..+.+.+...+. +++.++.+++||. + .
T Consensus 313 vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~ 392 (406)
T TIGR01849 313 VFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFR 392 (406)
T ss_pred HHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhh
Confidence 01366 9999999999999999999888887644332 3567777778994 2 2
Q ss_pred HHHHHHHHHHHHH
Q 025550 232 NEELRNLESWIKT 244 (251)
Q Consensus 232 ~~~~~~~~~~l~~ 244 (251)
.+....+.+||.+
T Consensus 393 ~~i~P~i~~wl~~ 405 (406)
T TIGR01849 393 EEIYPLVREFIRR 405 (406)
T ss_pred hhhchHHHHHHHh
Confidence 3446778888865
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.97 E-value=7.3e-09 Score=77.31 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=63.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhc--------CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFT--------SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
....|||+||.+++...++.++..+. ...+..+.+||...... ..|. .-....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~----~~g~---------------~l~~q~ 63 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA----FHGR---------------TLQRQA 63 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc----cccc---------------cHHHHH
Confidence 34679999998888777777665441 22456677777532110 0000 001112
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~ 169 (251)
+.+.+.++.+.+... ....+.++|+|+||||||.++-.++...+ +.++.++.++...
T Consensus 64 ~~~~~~i~~i~~~~~---~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 64 EFLAEAIKYILELYK---SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHHhhh---hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 223333333333221 22346789999999999998887765543 4588888887643
No 140
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.97 E-value=2.1e-08 Score=80.23 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=76.4
Q ss_pred CCccEEEEEecCCCCCCCchh------hhhhhcCCCcceEEEEccCCCCCCcccCCCCc-CCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEP------IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV-MPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~-~~~w~~~~~~~~~~~~~~~~ 109 (251)
.++|+|++.||.-.++..|.. ++=.|+++||.|-.-..||..-++.-...... ....++..-. +...
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~------Em~~ 144 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH------EMGT 144 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchh------hhhh
Confidence 889999999999888877765 33378899999998888764322211112211 1111111100 2233
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~ 169 (251)
.|+.++++.+.+. . ..+++..+|||+|+.....++...|+ +++..++++|..
T Consensus 145 yDLPA~IdyIL~~------T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 145 YDLPAMIDYILEK------T--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cCHHHHHHHHHHh------c--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 4555555555432 1 45799999999999999988887765 577888888744
No 141
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.97 E-value=3.5e-09 Score=88.87 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=76.0
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.++.|+||++||++. +...+ ......... ++.++.++||..+.. + ...... ...+.....|
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g-------~-----~~~~~~--~~~~n~g~~D 156 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLG-------F-----LSTGDI--ELPGNYGLKD 156 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccc-------c-----ccCCCC--CCCcchhHHH
Confidence 467899999999763 22222 112222223 388999999854431 1 000000 0112334577
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
...+++++++.+. ..+.|+++|.|+|+|.||.++..++... +..++++|+.||..
T Consensus 157 ~~~al~wv~~~i~---~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 157 QRLALKWVQDNIA---AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHH---HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 8888888888877 6788999999999999999998877662 34588888888744
No 142
>COG3150 Predicted esterase [General function prediction only]
Probab=98.95 E-value=4e-08 Score=67.42 Aligned_cols=155 Identities=15% Similarity=0.201 Sum_probs=92.8
Q ss_pred EEEEecCCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
||++||+.++..+.+.... .+.+.....+.+..|.- ..+...+++.+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l-------------------------------~h~p~~a~~ele 50 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHL-------------------------------PHDPQQALKELE 50 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCC-------------------------------CCCHHHHHHHHH
Confidence 8999999998877766222 23334444444444322 234455677777
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhh---------------------
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF--------------------- 179 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~--------------------- 179 (251)
+++.. .+ .+..+|+|-|+||+.+.+++.+.. +++++ +.|.+.+.+.+...+
T Consensus 51 ~~i~~---~~--~~~p~ivGssLGGY~At~l~~~~G--irav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~ 122 (191)
T COG3150 51 KAVQE---LG--DESPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIAT 122 (191)
T ss_pred HHHHH---cC--CCCceEEeecchHHHHHHHHHHhC--Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHH
Confidence 76663 22 234899999999999999998864 56665 555443322221111
Q ss_pred ------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 180 ------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 180 ------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
...+...-.+++.-+.|.+.+...+.+.+... ..++..|.+|.|. ...++.|..|.
T Consensus 123 l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~-------~~~V~dgg~H~F~~f~~~l~~i~aF~ 186 (191)
T COG3150 123 LCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC-------YEIVWDGGDHKFKGFSRHLQRIKAFK 186 (191)
T ss_pred HHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh-------hheeecCCCccccchHHhHHHHHHHh
Confidence 11112222445555669988877544444333 4567788899986 45577777775
No 143
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.91 E-value=1.1e-08 Score=82.14 Aligned_cols=120 Identities=20% Similarity=0.230 Sum_probs=78.9
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhhhhcCCC-cceEEEEccCCCCCCcccCCCCcCCccccccCCC--CCCCCCCC
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKTLFTSPE-FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP--VTASSPKD 108 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~--~~~~~~~~ 108 (251)
...+.|++|++||++ +++.....--..|+++| +.++.++||.... .|++....+ ........
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~l------------GfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGAL------------GFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccc------------eeeehhhcccccccccccc
Confidence 445679999999977 33333212223566666 8999999985432 223333322 11112345
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVP 170 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~ 170 (251)
..|...+++|+++.|. ..+-|+++|.|+|.|.||+.++.++. .|. .+..+|+.||...
T Consensus 158 l~DqilALkWV~~NIe---~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIE---AFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHH---HhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 6777788888888888 78889999999999999988876544 343 3666677777554
No 144
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.90 E-value=1.4e-07 Score=74.44 Aligned_cols=174 Identities=18% Similarity=0.198 Sum_probs=103.1
Q ss_pred CccEEEEEecCCCCCCCchh-------hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 38 ARNFILWLHGLGDSGPANEP-------IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..|+||++||+|-.-..... +...+. ....+.+||..++.. ..| ..-..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~----~~~------------------~~yPt 176 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD----EHG------------------HKYPT 176 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc----cCC------------------CcCch
Confidence 45999999998843333222 222343 458888998765411 011 11234
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC-----CCcceEEEeccCCCCcchhhh--------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP-----RKLGGGAIFSGWVPFNASLID-------- 177 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~~~~~~i~~~~~~~~~~~~~~-------- 177 (251)
++.+.++....+++ .. +.++|.|+|-|.||.+++.+..... ...+++|++|||.........
T Consensus 177 QL~qlv~~Y~~Lv~---~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n 251 (374)
T PF10340_consen 177 QLRQLVATYDYLVE---SE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDN 251 (374)
T ss_pred HHHHHHHHHHHHHh---cc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccc
Confidence 44555555555443 23 3579999999999999987765421 236889999999875410000
Q ss_pred ----------------h---------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 178 ----------------Q---------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 178 ----------------~---------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
. +.....+..++++.|+++-+ .++.+++.+.+.+.
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~ 329 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDV 329 (374)
T ss_pred ccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhc
Confidence 0 00001446788889888865 45677788888755
Q ss_pred CC-----eeEEEEeCCCCCCCC-HHHHHHHHHHH
Q 025550 215 GI-----SCEFKAYPGLGHSIS-NEELRNLESWI 242 (251)
Q Consensus 215 ~~-----~~~~~~~~g~~H~~~-~~~~~~~~~~l 242 (251)
+. ..+..+-+++.|--. .....++-.|.
T Consensus 330 ~~~~~~~~~nv~~~~~G~Hi~P~~~~~~~~~~W~ 363 (374)
T PF10340_consen 330 KPNKFSNSNNVYIDEGGIHIGPILNYSRDLDKWS 363 (374)
T ss_pred CccccCCcceEEEecCCccccchhhhhcCHHHHh
Confidence 42 356666777788543 22233444443
No 145
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.89 E-value=4.1e-07 Score=73.62 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
+.+.......++++....+-+..+..|+|-|+||+.++++|+..|+.+.-+++-+.
T Consensus 118 l~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGa 173 (581)
T PF11339_consen 118 LEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGA 173 (581)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCC
Confidence 34444444444444444555555899999999999999999999998777775544
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.88 E-value=1.1e-08 Score=80.50 Aligned_cols=138 Identities=13% Similarity=0.173 Sum_probs=78.0
Q ss_pred CCCccEEEEEecCCCCC--CCchh-hhh-hhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSG--PANEP-IKT-LFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~~~-~~~-~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+..+|++|++||+.++. ..|.. +.+ ++.. .++.++.+|+...-. ..+ ....
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~-----------~~Y------------~~a~ 124 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS-----------NNY------------PQAV 124 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS-----------S-H------------HHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc-----------ccc------------cchh
Confidence 56789999999999877 33444 444 5565 689999999752110 000 1112
Q ss_pred hHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEeccCCCCcchhhh--hhcccCC
Q 025550 110 SSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWVPFNASLID--QFTSDAK 184 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~~~~~~~~~--~~~~~~~ 184 (251)
.........+..++..+. ..+++.+++.|+|||+||++|..++..... ++..|..+.|..+....... ++... -
T Consensus 125 ~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~-D 203 (331)
T PF00151_consen 125 ANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKS-D 203 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GG-G
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhcc-C
Confidence 333344455555566555 678899999999999999999998888776 79999999987775543221 11111 1
Q ss_pred CCCEEEEccCCCC
Q 025550 185 KTPILWSHGMADR 197 (251)
Q Consensus 185 ~~p~l~~~g~~D~ 197 (251)
..=|-++|...+.
T Consensus 204 A~fVdvIHT~~~~ 216 (331)
T PF00151_consen 204 AKFVDVIHTNAGT 216 (331)
T ss_dssp SSEEEEE-SSES-
T ss_pred CceEEEEEcCCcc
Confidence 2335567766643
No 147
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.87 E-value=2e-08 Score=72.64 Aligned_cols=178 Identities=19% Similarity=0.285 Sum_probs=106.4
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
.++.-.+.|.-...|+.++...+..||.++.+||++.+.+.-....+ .+| .. .+....|+..+++.+.
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~---~~~-~~--------~DwA~~D~~aal~~~~ 99 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSG---SQW-RY--------LDWARLDFPAALAALK 99 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCcccccc---Ccc-ch--------hhhhhcchHHHHHHHH
Confidence 45555556666677888999999999999999999887654332221 112 00 0113345555555554
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe------ccCCCCcchh-------------------
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF------SGWVPFNASL------------------- 175 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~------~~~~~~~~~~------------------- 175 (251)
+.. +.-+...+|||+||.+...+. +++ +..+...+ +++......+
T Consensus 100 ~~~--------~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~ 169 (281)
T COG4757 100 KAL--------PGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGY 169 (281)
T ss_pred hhC--------CCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhcccc
Confidence 322 456789999999998876543 444 23332222 2222110000
Q ss_pred ----------------hhhh---------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 176 ----------------IDQF---------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 176 ----------------~~~~---------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
.+.. .-....+|+..+...+|+-.|+...+.+.+....+ +.
T Consensus 170 ~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl 247 (281)
T COG4757 170 MPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA--PL 247 (281)
T ss_pred CcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC--cc
Confidence 0000 00247899999999999999999888888877765 55
Q ss_pred EEEEeCC----CCCC-CCHH----HHHHHHHHH
Q 025550 219 EFKAYPG----LGHS-ISNE----ELRNLESWI 242 (251)
Q Consensus 219 ~~~~~~g----~~H~-~~~~----~~~~~~~~l 242 (251)
+.+.++- .||. ++.+ ..+++.+|+
T Consensus 248 ~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 248 EMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 5555543 4785 2222 246666664
No 148
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.84 E-value=1.9e-06 Score=67.59 Aligned_cols=206 Identities=13% Similarity=0.155 Sum_probs=113.1
Q ss_pred CCCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCC--CcccCCCCcCCccccccCCCCCCCC----
Q 025550 35 NPMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNN--PVTCNYGAVMPSWFDIHEIPVTASS---- 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~g~~~~~w~~~~~~~~~~~~---- 105 (251)
..+..-+||++||.|.+... ...+.+.|.+.||+++.+-.|.-... +.....-.....- ...........
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a-~~~~~~~~~~~~~~~ 161 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSA-GDQQLSQPSDEPSPA 161 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCC-CCCCcCCCCCCCccc
Confidence 45667899999999987643 23366689999999999999872211 1100000000000 00000000000
Q ss_pred -----CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccCCCCcchhhhh-
Q 025550 106 -----PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGWVPFNASLIDQ- 178 (251)
Q Consensus 106 -----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~~~~~~~~~~~- 178 (251)
.............+.+.+....+. ...+++|+||+.|+..+..+....+. .+.++|+++++.+........
T Consensus 162 ~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~ 239 (310)
T PF12048_consen 162 SAQEAEAREAYEERLFARIEAAIAFAQQQ--GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALA 239 (310)
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHH
Confidence 000112223333444444433222 34569999999999999999988774 488999999988766541111
Q ss_pred hcccCCCCCEEEEccCCCCcccchhcccchHHHHhc-CCeeEEEEeCCCCCCCCH--H-HHHHHHHHHHH
Q 025550 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA-GISCEFKAYPGLGHSISN--E-ELRNLESWIKT 244 (251)
Q Consensus 179 ~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~~H~~~~--~-~~~~~~~~l~~ 244 (251)
-.....+.|||=++..+ .......+..-....++. ...++-..+.+..|.... + ....|..|+.+
T Consensus 240 ~~la~l~iPvLDi~~~~-~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~ 308 (310)
T PF12048_consen 240 EQLAQLKIPVLDIYSAD-NPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKR 308 (310)
T ss_pred HHhhccCCCEEEEecCC-ChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHh
Confidence 11234789999888777 332223222222223332 234666777776665542 2 34566666654
No 149
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.83 E-value=8.7e-09 Score=63.35 Aligned_cols=45 Identities=7% Similarity=0.276 Sum_probs=41.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCC
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
+.+.+|+++||.+.+...|..+++.|+++||.++.+|.++++.+.
T Consensus 14 ~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 14 PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 378999999999999999999999999999999999999997753
No 150
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.83 E-value=1.1e-07 Score=71.42 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=91.2
Q ss_pred CCCccEEEEEecCCCCCCCch-hhhhhhcCCCc--ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPANE-PIKTLFTSPEF--KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.+.++||+||+..+...-. ..++.....++ .++.+..|..+.. .. ...+....
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~----------~~------------Y~~d~~~a 72 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL----------LG------------YFYDRESA 72 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh----------hh------------hhhhhhhH
Confidence 356789999999998754422 23333333333 5667777744320 11 13344566
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cC-----CCcceEEEeccCCCCcchhhhhhcccC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YP-----RKLGGGAIFSGWVPFNASLIDQFTSDA 183 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p-----~~~~~~i~~~~~~~~~~~~~~~~~~~~ 183 (251)
..+...+.+++..+.+. ...++|.|++||||+.+.+.+... .+ ..+..+++.+|..+...-.........
T Consensus 73 ~~s~~~l~~~L~~L~~~-~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~ 151 (233)
T PF05990_consen 73 RFSGPALARFLRDLARA-PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGS 151 (233)
T ss_pred HHHHHHHHHHHHHHHhc-cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhh
Confidence 66777777777766432 346799999999999999877644 11 257889999987776332211112233
Q ss_pred CCCCEEEEccCCCCcccch
Q 025550 184 KKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~ 202 (251)
...++.+.+..+|......
T Consensus 152 ~~~~itvy~s~~D~AL~~S 170 (233)
T PF05990_consen 152 SARRITVYYSRNDRALKAS 170 (233)
T ss_pred cCCCEEEEEcCCchHHHHH
Confidence 5589999999999875543
No 151
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.80 E-value=1.9e-07 Score=68.55 Aligned_cols=193 Identities=14% Similarity=0.112 Sum_probs=111.7
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCc-----ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEF-----KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..||+||++++......+++.+...+- -++.++--+. ....+-.+...-++.... ..........+.
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgs----lk~tGk~~Kd~~nP~I~~----gfe~n~~s~~~~ 118 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGS----LKVTGKISKDAKNPIIEF----GFEDNTASGLDQ 118 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCc----EEEeeeecccCCCCeEEE----EEecCcCchhhH
Confidence 468999999999999888887765541 1222232221 111111111111111110 012233344445
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCC-----cchhh----hh--
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPF-----NASLI----DQ-- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~-----~~~~~----~~-- 178 (251)
..++..++..+. ++++ .++-++||||||....+++..+.. .+...|++++.+.. ..... ..
T Consensus 119 s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~ 196 (288)
T COG4814 119 SKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPG 196 (288)
T ss_pred HHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCcc
Confidence 777777777775 5554 589999999999999988887532 47888888886651 11110 00
Q ss_pred -------------hcccCCCCCEEEEccCCC------CcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCC---HHH
Q 025550 179 -------------FTSDAKKTPILWSHGMAD------RTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSIS---NEE 234 (251)
Q Consensus 179 -------------~~~~~~~~p~l~~~g~~D------~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~---~~~ 234 (251)
......+..++++.|+-| ..||...+...+..+...+..+.-.+++| +.|.-. ...
T Consensus 197 ~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v 276 (288)
T COG4814 197 LIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTV 276 (288)
T ss_pred ccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhH
Confidence 001125678999999874 56777777777777777665555555665 467543 223
Q ss_pred HHHHHHHHH
Q 025550 235 LRNLESWIK 243 (251)
Q Consensus 235 ~~~~~~~l~ 243 (251)
...+..||-
T Consensus 277 ~~yv~~FLw 285 (288)
T COG4814 277 AKYVKNFLW 285 (288)
T ss_pred HHHHHHHhh
Confidence 455666654
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.78 E-value=9.5e-08 Score=78.20 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHH---HcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCCCcchhhhhhcc---cC
Q 025550 111 SLLKAVRNVHAMIDKEV---AAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVPFNASLIDQFTS---DA 183 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~~~~~~~~~~~~---~~ 183 (251)
.+....+.+..+..... ........|+|+|+|||+.++++....+.+. +.++|.++=.+...+. .+.+.+ -.
T Consensus 224 nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg-prgirDE~Lld 302 (784)
T KOG3253|consen 224 NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG-PRGIRDEALLD 302 (784)
T ss_pred chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc-ccCCcchhhHh
Confidence 34444444444443221 3445678999999999988888877665433 6777766543322111 011111 13
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.+.|+|++.|.+|...+.+..+++.+++++ ..+++++.+++|.+.
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMA 347 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCcccc
Confidence 789999999999999999988888888877 678999999999873
No 153
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.77 E-value=2.7e-07 Score=86.28 Aligned_cols=174 Identities=11% Similarity=0.109 Sum_probs=112.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.++++||.+++...|..+++.+. .++.++.++.|+.... .....++.+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~-------------------------~~~~~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGP-------------------------MQTATSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCC-------------------------CCCCCCHHHHHHH
Confidence 3679999999999999999998885 5689999998865321 1122455556666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh---cCCCcceEEEeccCCCCc------------chhh-------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL---YPRKLGGGAIFSGWVPFN------------ASLI------- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~p~~~~~~i~~~~~~~~~------------~~~~------- 176 (251)
+.+.+... . ...++.++|||+||.++..+|.+ .++.+..++++.++.... ....
T Consensus 1122 ~~~~i~~~---~-~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1197 (1296)
T PRK10252 1122 HLATLLEQ---Q-PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDRER 1197 (1296)
T ss_pred HHHHHHhh---C-CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhH
Confidence 66655532 1 23589999999999999999886 466788887776533211 0000
Q ss_pred --------------------hh----------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 177 --------------------DQ----------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 177 --------------------~~----------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
.. ........|+.++.++.|..........+.+.. ..++.+.++|
T Consensus 1198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~----~~~~~~~v~g- 1272 (1296)
T PRK10252 1198 EAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI----AELDVYRQDC- 1272 (1296)
T ss_pred HHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc----CCCEEEECCC-
Confidence 00 001235688999999888655544433343332 2456677775
Q ss_pred CCCCC--HHHHHHHHHHHHHhhc
Q 025550 227 GHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 227 ~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
+|... .+....+.++|.+.+.
T Consensus 1273 ~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1273 AHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred CHHHHCCcHHHHHHHHHHHHHhc
Confidence 89754 4456777888777653
No 154
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.70 E-value=1.5e-06 Score=65.95 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=106.6
Q ss_pred CCccEEEEEecCCCCCCC-chhhhh----hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGPA-NEPIKT----LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.++|++|=+|..|-+... |..+.. ....+.+.++.+|.||....-.+... .....+
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-------------------~y~yPs 81 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-------------------GYQYPS 81 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T-------------------T-----
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc-------------------cccccC
Confidence 368999999999976544 555322 12236899999999977542111111 112345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------ 173 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------ 173 (251)
+++..+.+..+++ ..++ +.++-+|--.|+.+-..+|..+|+++.|+|++++......
T Consensus 82 md~LAe~l~~Vl~---~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 82 MDQLAEMLPEVLD---HFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp HHHHHCTHHHHHH---HHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------C
T ss_pred HHHHHHHHHHHHH---hCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccc
Confidence 5556666666666 3444 5799999999999999999999999999999987332110
Q ss_pred -----------------------hhhhh--------h--------------------cccCCCCCEEEEccCCCCcccch
Q 025550 174 -----------------------SLIDQ--------F--------------------TSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 174 -----------------------~~~~~--------~--------------------~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
+..+. . ......+|+|++.|+.-+.. +
T Consensus 157 mt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~ 234 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--D 234 (283)
T ss_dssp TTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--H
T ss_pred cccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--h
Confidence 00000 0 01236799999999988763 4
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+..+..+|.. .+.++..++++|=....+.+.++.+-|+=+++
T Consensus 235 ~vv~~ns~Ldp--~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 235 DVVEMNSKLDP--TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHHS-C--CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHhhcCc--ccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 55566666644 35899999998877777777776665555543
No 155
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.70 E-value=3.6e-08 Score=83.66 Aligned_cols=115 Identities=21% Similarity=0.222 Sum_probs=71.4
Q ss_pred CccEEEEEecCCCC---CC-CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGDS---GP-ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.|++|++||++.. +. ....-...+...++.++.+.||...- +|+........ .+.....|..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~------------Gfl~~~~~~~~-~gN~Gl~Dq~ 190 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAF------------GFLSLGDLDAP-SGNYGLLDQR 190 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHH------------HH-BSSSTTSH-BSTHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccc------------ccccccccccC-chhhhhhhhH
Confidence 68999999997732 21 12223345667899999999984321 11111111000 1233456777
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGW 168 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~ 168 (251)
.+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||.
T Consensus 191 ~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 191 LALKWVQDNIA---AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred HHHHHHHhhhh---hcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 77888888777 7888999999999999999988776652 2469999999983
No 156
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.67 E-value=5.9e-07 Score=71.03 Aligned_cols=106 Identities=10% Similarity=0.182 Sum_probs=62.6
Q ss_pred CccEEEEEecCCCCC-----CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLGDSG-----PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
-.+.++++|-+-... ..-+.++..+.++|..++.++..+-.. +.. ....++.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~---------~~~--------------~~~~edY 162 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDA---------SLA--------------AKNLEDY 162 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchH---------hhh--------------hccHHHH
Confidence 344566667644221 112337788999999999988763211 111 1122222
Q ss_pred H-HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCC
Q 025550 113 L-KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVP 170 (251)
Q Consensus 113 ~-~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~ 170 (251)
. ..+....+.+.+ .. ..++|-++|+|.||.++..+++.++.+ ++.+..+....+
T Consensus 163 i~e~l~~aid~v~~--it--g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 163 ILEGLSEAIDTVKD--IT--GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHHHHHHHHH--Hh--CccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 2 222222222222 11 346899999999999999888888876 888877765443
No 157
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=3.2e-06 Score=62.12 Aligned_cols=183 Identities=11% Similarity=0.082 Sum_probs=103.9
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCC---cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+++.++++.|-.+....|..+++.+...- +.+..+-.-++-.-|.+.....+ ....+.-+
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s--------------~~~~eifs 90 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHS--------------HTNEEIFS 90 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccc--------------cccccccc
Confidence 34678999999999999888888888554322 33444444433332211111110 11222333
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEeccCC--------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWV-------------------- 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~-------------------- 169 (251)
+.+.++.=.++++ +.-....++.++|||-|+++.+.+.-.... .+..++++-|..
T Consensus 91 L~~QV~HKlaFik---~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~ 167 (301)
T KOG3975|consen 91 LQDQVDHKLAFIK---EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLP 167 (301)
T ss_pred hhhHHHHHHHHHH---HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeeh
Confidence 4444444444444 233346799999999999999998864332 233334333311
Q ss_pred -----------CCcchhhh---------------hhc---------------------------------ccCCCCCEEE
Q 025550 170 -----------PFNASLID---------------QFT---------------------------------SDAKKTPILW 190 (251)
Q Consensus 170 -----------~~~~~~~~---------------~~~---------------------------------~~~~~~p~l~ 190 (251)
...+.+.+ .+. -++...-+.+
T Consensus 168 hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~F 247 (301)
T KOG3975|consen 168 HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWF 247 (301)
T ss_pred hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEE
Confidence 00000000 000 0124567889
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHH
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRN 237 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~ 237 (251)
.+|+.|..+|.+..+.+.+.+.+. ++++.+ +++.|.|.....+.
T Consensus 248 yygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~q~ 291 (301)
T KOG3975|consen 248 YYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHAQY 291 (301)
T ss_pred EccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceeecccHH
Confidence 999999999988776677776664 456665 67899886444333
No 158
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.61 E-value=1.5e-05 Score=61.69 Aligned_cols=205 Identities=14% Similarity=0.118 Sum_probs=115.4
Q ss_pred EEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCc-------hhhhhhhcCCCcceEEEEccCCCCCCc
Q 025550 10 FTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPAN-------EPIKTLFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
..++..++..+++..+..+ ..++...|+++-|-++.-+.. ..+.+.....+..++.+.|||.+.+.
T Consensus 114 Rv~Iq~D~~~IDt~~I~~~------~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~- 186 (365)
T PF05677_consen 114 RVPIQYDGVKIDTMAIHQP------EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST- 186 (365)
T ss_pred eEEEeeCCEEEEEEEeeCC------CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC-
Confidence 3466678888888776532 235667899999977654441 12445555678899999999775431
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----C
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----K 158 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~ 158 (251)
+.....++..+...+...+.+. ..++.+++|++.|||+||.++..++.++.. .
T Consensus 187 ----------------------G~~s~~dLv~~~~a~v~yL~d~-~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dg 243 (365)
T PF05677_consen 187 ----------------------GPPSRKDLVKDYQACVRYLRDE-EQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDG 243 (365)
T ss_pred ----------------------CCCCHHHHHHHHHHHHHHHHhc-ccCCChheEEEeeccccHHHHHHHHHhcccccCCC
Confidence 1223344444444443333211 356788999999999999998876555432 2
Q ss_pred cceEEEec-cCCCCcchhhhh-------------------hcccCCCCCEEEEccCC-------CCcccchhcccchHHH
Q 025550 159 LGGGAIFS-GWVPFNASLIDQ-------------------FTSDAKKTPILWSHGMA-------DRTVLFEAGQAGPPFL 211 (251)
Q Consensus 159 ~~~~i~~~-~~~~~~~~~~~~-------------------~~~~~~~~p~l~~~g~~-------D~~~~~~~~~~~~~~l 211 (251)
++=++.-. ++.......... -......+|=+++++.+ |..++.+. .++..+
T Consensus 244 i~~~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~--~lA~~~ 321 (365)
T PF05677_consen 244 IRWFLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPEN--CLAAAF 321 (365)
T ss_pred eeEEEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcch--hhHHHh
Confidence 33222221 111111100000 01134779999998875 55555544 345555
Q ss_pred HhcC------CeeEEEEeCCCCCC--CCHHHHHHHHHHHHHhh
Q 025550 212 EQAG------ISCEFKAYPGLGHS--ISNEELRNLESWIKTRM 246 (251)
Q Consensus 212 ~~~~------~~~~~~~~~g~~H~--~~~~~~~~~~~~l~~~l 246 (251)
.+.. .+..++.-....|. +..+..+.+..-|.+++
T Consensus 322 l~~~~~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 322 LDPPTAEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cCCcccccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 4421 12333333334564 44556777777777665
No 159
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.57 E-value=2.3e-07 Score=68.47 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=52.1
Q ss_pred EEEEEecCCC-CCCCchhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 41 FILWLHGLGD-SGPANEPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 41 ~vv~~HG~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.|||+||.++ ....|..+++.|+++||. ++.++|-..... .. ........+.+
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~-----------~~------------~~~~~~~~~~~ 59 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS-----------PS------------VQNAHMSCESA 59 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH-----------TH------------HHHHHB-HHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC-----------Cc------------ccccccchhhH
Confidence 5899999998 668899999999999999 588777422110 00 00001122334
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++++|+..+.. ... +|=|+||||||.++-.+...
T Consensus 60 ~~l~~fI~~Vl~~-TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAY-TGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHH-HT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hCC-EEEEEEcCCcCHHHHHHHHH
Confidence 6777777765422 245 89999999999999877653
No 160
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.54 E-value=4.8e-07 Score=69.47 Aligned_cols=158 Identities=14% Similarity=0.189 Sum_probs=95.1
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
.+.++++.++++..+.... +.......+||++-|-.+ .|+- ....-.+.||.++.+..||-..+...
T Consensus 218 kiks~dgneiDtmF~d~r~---n~~~ngq~LvIC~EGNAG---FYEvG~m~tP~~lgYsvLGwNhPGFagSTG~------ 285 (517)
T KOG1553|consen 218 KIKSSDGNEIDTMFLDGRP---NQSGNGQDLVICFEGNAG---FYEVGVMNTPAQLGYSVLGWNHPGFAGSTGL------ 285 (517)
T ss_pred EEeecCCcchhheeecCCC---CCCCCCceEEEEecCCcc---ceEeeeecChHHhCceeeccCCCCccccCCC------
Confidence 4455666677766555321 123334578888888443 2322 33344458999999999965442110
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
+... .-.++++ .+++..+ ..+...+.|++.|+|.||..+.++|..||+ ++++|+-+.+
T Consensus 286 ----------------P~p~-n~~nA~D---aVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 286 ----------------PYPV-NTLNAAD---AVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred ----------------CCcc-cchHHHH---HHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 1111 1112222 2222222 567788999999999999999999999996 8999977664
Q ss_pred CCCcchhhhhh----------------------cccCCCCCEEEEccCCCCcccc
Q 025550 169 VPFNASLIDQF----------------------TSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 169 ~~~~~~~~~~~----------------------~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
-+...-....+ .....+.|+.++.-++|+++..
T Consensus 345 DDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 345 DDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred hhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 43221111000 0123788999999999887653
No 161
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.52 E-value=2.5e-06 Score=66.24 Aligned_cols=186 Identities=13% Similarity=0.150 Sum_probs=107.4
Q ss_pred CCccEEEEEecCCCCCCC-chhhhhhhcCCCcceE--EEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLT--KWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..+.+++|+||++.+-.+ -...++.....|+..+ .|-.|..+. . -++..|.+...
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~----------------l------~~Yn~DreS~~ 171 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGS----------------L------LGYNYDRESTN 171 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCe----------------e------eecccchhhhh
Confidence 566899999999865444 3335565555666554 444443221 0 11144667777
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
.+...|..++..+.+. ...++|.|++||||.++++....+. +..++-+|+.++-.+..--..+...-.+..
T Consensus 172 ~Sr~aLe~~lr~La~~-~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~ 250 (377)
T COG4782 172 YSRPALERLLRYLATD-KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPD 250 (377)
T ss_pred hhHHHHHHHHHHHHhC-CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCC
Confidence 7777888877776532 2467999999999999999776542 335888999888776543322222223344
Q ss_pred CCEEEEccCCCC--------------cccchhcccchHHHHhcCCe-eEEEEeC---CCCCCCCHHHHHHHHHHHHHhhc
Q 025550 186 TPILWSHGMADR--------------TVLFEAGQAGPPFLEQAGIS-CEFKAYP---GLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 186 ~p~l~~~g~~D~--------------~~~~~~~~~~~~~l~~~~~~-~~~~~~~---g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.|+-++...+|. +-....+...+ .+...|+. +++-... +..|....+..+.+ +|+...+.
T Consensus 251 ~~ft~~~s~dDral~~s~~i~g~~~Rlga~d~~~~~~-~l~~~gisvVDls~~k~~d~l~h~k~a~~p~lv-~lig~r~~ 328 (377)
T COG4782 251 PPFTLFVSRDDRALALSRRISGDVPRLGAIDPSADPY-ALASGGISVVDLSKVKASDGLNHGKFADSPELV-RLIGSRLI 328 (377)
T ss_pred CCeeEEecccchhhccccccccCCcccccCCcccchH-HHHhCCcEEEEccccccccccccchhccChhHH-Hhhhhhcc
Confidence 455554444443 22222222222 45555443 3332222 23576666666666 88877664
No 162
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.50 E-value=1.3e-05 Score=60.45 Aligned_cols=180 Identities=14% Similarity=0.118 Sum_probs=113.1
Q ss_pred CccEEEEEecCCCCCCC-chhhhh-----hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGPA-NEPIKT-----LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
++|++|=.|..|-+... |..+.. .+..+ |.++.++.||.-..-..... ......
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~-------------------~y~yPs 104 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE-------------------GYPYPS 104 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC-------------------CCCCCC
Confidence 67889999999976544 444222 34444 88899998865432111111 112345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------ 173 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------ 173 (251)
+++..+.|..+++ ..+ -+.++-+|--.|+++-..+|+.+|+++-|+|++++......
T Consensus 105 md~LAd~l~~VL~---~f~--lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~G 179 (326)
T KOG2931|consen 105 MDDLADMLPEVLD---HFG--LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYG 179 (326)
T ss_pred HHHHHHHHHHHHH---hcC--cceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhc
Confidence 5555666666666 333 45789999999999999999999999999999986221100
Q ss_pred -----------------------hhhhhh--------c--------------------c----cCCCCCEEEEccCCCCc
Q 025550 174 -----------------------SLIDQF--------T--------------------S----DAKKTPILWSHGMADRT 198 (251)
Q Consensus 174 -----------------------~~~~~~--------~--------------------~----~~~~~p~l~~~g~~D~~ 198 (251)
++.+.+ . . ...++|++++.|+.-+.
T Consensus 180 mt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~ 259 (326)
T KOG2931|consen 180 MTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPH 259 (326)
T ss_pred hhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCch
Confidence 000000 0 0 12569999999988766
Q ss_pred ccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 199 VLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+. .+.....+|.. ....+....++|=....+.+.++.+-++=++
T Consensus 260 ~~--~vv~~n~~Ldp--~~ttllk~~d~g~l~~e~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 260 VS--AVVECNSKLDP--TYTTLLKMADCGGLVQEEQPGKLAEAFKYFL 303 (326)
T ss_pred hh--hhhhhhcccCc--ccceEEEEcccCCcccccCchHHHHHHHHHH
Confidence 44 33444455543 2468888888887776656555555444444
No 163
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.47 E-value=5.6e-06 Score=65.72 Aligned_cols=134 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC-CCcc---------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV-PFNA--------------- 173 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~-~~~~--------------- 173 (251)
.....+++.+.+.+.+ ..+++.++.+|.|.|==|..++.+|+.. +++++++.+.-.. ....
T Consensus 150 ka~vrAMD~vq~~~~~--~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~ 226 (367)
T PF10142_consen 150 KAAVRAMDAVQEFLKK--KFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSF 226 (367)
T ss_pred HHHHHHHHHHHHHHHh--hcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCcc
Confidence 3444555555555443 2466788999999999999999998855 5788887664211 1100
Q ss_pred ---hhh-----hhh----------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 174 ---SLI-----DQF----------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 174 ---~~~-----~~~----------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
+.. ..+ -..+..+|.+++.|..|++..++.+.-+++.|.+ +..+..+|+++|.
T Consensus 227 a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~ 303 (367)
T PF10142_consen 227 AFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHS 303 (367)
T ss_pred chhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcc
Confidence 000 000 0124789999999999999999999999999876 6789999999998
Q ss_pred CCH-HHHHHHHHHHHHhhcCC
Q 025550 230 ISN-EELRNLESWIKTRMSCS 249 (251)
Q Consensus 230 ~~~-~~~~~~~~~l~~~l~~~ 249 (251)
... +..+.+..|+...+.++
T Consensus 304 ~~~~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 304 LIGSDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred cchHHHHHHHHHHHHHHHcCC
Confidence 875 44677888888876644
No 164
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.46 E-value=3e-06 Score=64.29 Aligned_cols=163 Identities=15% Similarity=0.171 Sum_probs=104.9
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+||++--.|....+.....+..++.|+.++.+-.|.... -.....+...++.+
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~--------------------------~~~~~~~~~~~~~l 54 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADF--------------------------FWPSKRLAPAADKL 54 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHH--------------------------eeeccchHHHHHHH
Confidence 4555555555555556667777777999998877652100 00013444555555
Q ss_pred HHHHHHHHHcCCCC-CcEEEEEeChhHHHHHHHHHh---------cC-CCcceEEEeccCCCCcc-------------h-
Q 025550 120 HAMIDKEVAAGIDP-NNVFVCGFSQGGALTLASVLL---------YP-RKLGGGAIFSGWVPFNA-------------S- 174 (251)
Q Consensus 120 ~~~i~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~---------~p-~~~~~~i~~~~~~~~~~-------------~- 174 (251)
.+.+.+ ..-.. .++.+-.+|.||...+..... .+ ..++++|.-|+...... .
T Consensus 55 ~~~l~~---~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~ 131 (240)
T PF05705_consen 55 LELLSD---SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSS 131 (240)
T ss_pred HHHhhh---hccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccc
Confidence 555542 22222 389999999988877655441 11 12788887665322110 0
Q ss_pred ------hhh------------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 175 ------LID------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 175 ------~~~------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
... ........+|-+.++++.|.+++.+..++..+..++.|.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V 211 (240)
T PF05705_consen 132 PRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDV 211 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 000 00012356899999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCC
Q 025550 219 EFKAYPGLGHSIS 231 (251)
Q Consensus 219 ~~~~~~g~~H~~~ 231 (251)
+...+++..|.-+
T Consensus 212 ~~~~f~~S~HV~H 224 (240)
T PF05705_consen 212 RAEKFEDSPHVAH 224 (240)
T ss_pred EEecCCCCchhhh
Confidence 9999999998654
No 165
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.46 E-value=4.6e-07 Score=67.48 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=53.4
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++.-+||++||..++..+|..+.+.+... .+....+.+..... .......++..
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~------------------------n~~~T~~gI~~ 57 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSN------------------------NEFKTFDGIDV 57 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccc------------------------cccccchhhHH
Confidence 45578999999999999998877765541 22221222111000 00122344454
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..+.+.+.+.... .......+|.++|||+||.++-.+..
T Consensus 58 ~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 58 CGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 5555544444332 22222368999999999999876554
No 166
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=2e-06 Score=64.99 Aligned_cols=101 Identities=16% Similarity=0.155 Sum_probs=72.4
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.++++|+.++....|..++..+... ..++.++.|+... .......+.+.++..
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~-------------------------~~~~~~~l~~~a~~y 54 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGA-------------------------GEQPFASLDDMAAAY 54 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccc-------------------------cccccCCHHHHHHHH
Confidence 56899999999999999999988755 7788888774321 123445566666666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCC
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVP 170 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~ 170 (251)
.+.|... . +..++.|.|||+||.+|..+|.+. .+.+.-++++....+
T Consensus 55 v~~Ir~~---Q-P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 55 VAAIRRV---Q-PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHh---C-CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 6666533 2 456899999999999999998764 234666666655544
No 167
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.39 E-value=6.7e-07 Score=61.74 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=69.9
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----------------hhh-----cccCCCCCEEEEc
Q 025550 134 NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI----------------DQF-----TSDAKKTPILWSH 192 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~----------------~~~-----~~~~~~~p~l~~~ 192 (251)
.+..+.|.||||..+..+..++|+.+.++|++||..+...-+. ..+ -..-....+.+.+
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~l~rlr~~~~vfc~ 180 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFRLERLRRIDMVFCI 180 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHHHHHHhhccEEEEe
Confidence 4578999999999999999999999999999999554321110 000 0112456788899
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
|..|+..+ +.+.+.+.|.++.++..+.+..|..|..
T Consensus 181 G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 181 GDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred cCcccccc--chHHHHHHhccccccHHHHHhccccccc
Confidence 99988866 3457888888887887777787777764
No 168
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.38 E-value=1.1e-05 Score=58.35 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=66.2
Q ss_pred CCCccEEEEEecCCCCC--CCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG--PAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+-.+..|||+-|.|..- -.| ..+.+++.+.+|..+.+..+.++. |++ .-.+
T Consensus 33 gv~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~-------G~G-------------------t~sl 86 (299)
T KOG4840|consen 33 GVESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN-------GYG-------------------TFSL 86 (299)
T ss_pred CceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc-------ccc-------------------cccc
Confidence 33457788888877432 223 337778889999888777664432 211 1122
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccCC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGWV 169 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~~ 169 (251)
.+.++++..+++++...+. ...|+++|||-|+.-.+++..+ -+..+.+.|+.+|..
T Consensus 87 k~D~edl~~l~~Hi~~~~f-St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 87 KDDVEDLKCLLEHIQLCGF-STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred cccHHHHHHHHHHhhccCc-ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 2335556666665443333 3489999999999988877633 244567777676644
No 169
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.34 E-value=2e-05 Score=62.75 Aligned_cols=115 Identities=18% Similarity=0.184 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCC--CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----------
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGID--PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI---------- 176 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~---------- 176 (251)
...+-++++.+.++..-.....-. .-+++++|+|.||+++...|--.|-.+.+++--|++..+.....
T Consensus 157 N~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y 236 (403)
T PF11144_consen 157 NFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKY 236 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccc
Confidence 344555555555444322222212 24899999999999999999889998999998888664311100
Q ss_pred ----h-----h--------------------hc------------------ccC-CCCCEEEEccCCCCcccchhcccch
Q 025550 177 ----D-----Q--------------------FT------------------SDA-KKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 177 ----~-----~--------------------~~------------------~~~-~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
. . +. ... .++-.+..|+..|...|.+.-+.++
T Consensus 237 ~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~ 316 (403)
T PF11144_consen 237 ICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELY 316 (403)
T ss_pred cccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHH
Confidence 0 0 00 001 3344556999999999999999999
Q ss_pred HHHHhcCCeeEEEEe
Q 025550 209 PFLEQAGISCEFKAY 223 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~ 223 (251)
+.+++.|.+++++.+
T Consensus 317 ~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 317 EILKNLGFDATLHLI 331 (403)
T ss_pred HHHHHcCCCeEEEEe
Confidence 999999999999888
No 170
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.27 E-value=0.0001 Score=54.84 Aligned_cols=177 Identities=14% Similarity=0.166 Sum_probs=98.4
Q ss_pred CccEEEEEecCC-CC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLG-DS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|=|+-|.. +. .-.|+.+.+.|.++||.+++.=|... -....-..+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t----------------------------fDH~~~A~~ 67 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT----------------------------FDHQAIARE 67 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC----------------------------CcHHHHHHH
Confidence 445555555532 22 23477788889999999887666421 001122223
Q ss_pred HHHHHHHHHHHHH-HcCCCC--CcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc-------CCCC-------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDP--NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG-------WVPF------------- 171 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~-------~~~~------------- 171 (251)
.....+..++.+. +.+.+. -++.=+|||+|+-+-+.+...++..-++-+++|= .++.
T Consensus 68 ~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 68 VWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCcc
Confidence 3333333343333 233332 2677899999999999888776544455444442 1111
Q ss_pred --cchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe-eEEEEeCCCCCCCCH------------HHHH
Q 025550 172 --NASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISN------------EELR 236 (251)
Q Consensus 172 --~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~~H~~~~------------~~~~ 236 (251)
.......+.....-...+++.-.+|.+ +++..+.+.|++...+ ++....+| .|.... .-.+
T Consensus 148 PsP~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~d 223 (250)
T PF07082_consen 148 PSPEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLD 223 (250)
T ss_pred CCHHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchH
Confidence 111111122222445567777777765 4666778888765333 67788886 896431 1157
Q ss_pred HHHHHHHHhh
Q 025550 237 NLESWIKTRM 246 (251)
Q Consensus 237 ~~~~~l~~~l 246 (251)
.+.+|+++.+
T Consensus 224 a~~q~~k~~~ 233 (250)
T PF07082_consen 224 AVGQWLKQEV 233 (250)
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.25 E-value=6.6e-06 Score=64.17 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=48.8
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhh
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTRM 246 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l 246 (251)
+|+++++|.+|..+|...+..+++..+.. +.+...+++++|.... +..+++.+|+.+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999888888887775 5677888888997651 35788889988875
No 172
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.22 E-value=6.1e-06 Score=67.50 Aligned_cols=92 Identities=10% Similarity=-0.003 Sum_probs=61.0
Q ss_pred CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC
Q 025550 51 SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG 130 (251)
Q Consensus 51 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 130 (251)
....|..+++.|.+.||.. ..|++++| ++|- . .....+..+.+.+.++.+.+.
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~g------------YDwR------------~-~~~~~~~~~~Lk~lIe~~~~~- 158 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFG------------YDFR------------Q-SNRLPETMDGLKKKLETVYKA- 158 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCC------------CCcc------------c-cccHHHHHHHHHHHHHHHHHH-
Confidence 3456777888999999855 56666543 2221 0 011334456666666655422
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCC
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWV 169 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~ 169 (251)
...+++.|+||||||.++..++..+|+. ++.+|.+++..
T Consensus 159 ~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 159 SGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred cCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 2356899999999999999999888764 67888887644
No 173
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.21 E-value=6.7e-05 Score=55.34 Aligned_cols=165 Identities=12% Similarity=0.080 Sum_probs=89.6
Q ss_pred EEecCC--CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHH
Q 025550 44 WLHGLG--DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121 (251)
Q Consensus 44 ~~HG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (251)
++|..+ ++...|..+...+. ..+.++.++.++.... .....++...++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~-------------------------~~~~~~~~~~~~~~~~ 55 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPG-------------------------EPLPASADALVEAQAE 55 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCC-------------------------CCCCCCHHHHHHHHHH
Confidence 344433 44556777777776 4678888888855221 0011122222333333
Q ss_pred HHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcch-------h----------------
Q 025550 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNAS-------L---------------- 175 (251)
Q Consensus 122 ~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~~-------~---------------- 175 (251)
.+.. .....++.++|||+||.++..++.+. +..+.+++.+....+.... .
T Consensus 56 ~l~~----~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (212)
T smart00824 56 AVLR----AAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDD 131 (212)
T ss_pred HHHH----hcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccc
Confidence 2221 12346799999999999998888763 4457777766543321100 0
Q ss_pred ------------hhhhcccCCCCCEEEEccCCCCcc-cchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHH
Q 025550 176 ------------IDQFTSDAKKTPILWSHGMADRTV-LFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESW 241 (251)
Q Consensus 176 ------------~~~~~~~~~~~p~l~~~g~~D~~~-~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~ 241 (251)
...+.......|+.++.++.|... +......+.+ ......+.+.++| +|... .+....+.+-
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~---~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~ 207 (212)
T smart00824 132 ARLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRA---HWPLPHTVVDVPG-DHFTMMEEHAAATARA 207 (212)
T ss_pred hhhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccC---CCCCCceeEEccC-chHHHHHHhHHHHHHH
Confidence 000112346789999999988653 2122122222 1233578888997 88764 3344444443
Q ss_pred H
Q 025550 242 I 242 (251)
Q Consensus 242 l 242 (251)
+
T Consensus 208 ~ 208 (212)
T smart00824 208 V 208 (212)
T ss_pred H
Confidence 3
No 174
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.17 E-value=1.7e-05 Score=55.72 Aligned_cols=70 Identities=19% Similarity=0.022 Sum_probs=49.1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
+..++.++|||+||.+|..++..... ....++.+++.......+............+..++...|.+...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~~~D~v~~~ 99 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVNDNDIVPRL 99 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEECCCccCCC
Confidence 56799999999999999998887654 46667777776655544332111233456788889999976543
No 175
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.10 E-value=1.5e-05 Score=63.46 Aligned_cols=100 Identities=17% Similarity=0.211 Sum_probs=68.6
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..-.++++||++.....+..+...+...|+. ++.+.+++. . .......
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~----------------------------~~~~~~~ 108 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-D----------------------------GTYSLAV 108 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-C----------------------------CCccccc
Confidence 3447999999988888888888888888887 666666532 0 0111112
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~ 167 (251)
..+.+...++.... ....+++.++|||+||..+.+++...+ ..++.++.+++
T Consensus 109 ~~~ql~~~V~~~l~-~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 109 RGEQLFAYVDEVLA-KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred cHHHHHHHHHHHHh-hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 23344444443331 123579999999999999999988887 67888888876
No 176
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.08 E-value=2.7e-05 Score=66.43 Aligned_cols=112 Identities=21% Similarity=0.185 Sum_probs=71.9
Q ss_pred ccEEEEEecCCC---CCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 39 RNFILWLHGLGD---SGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 39 ~~~vv~~HG~~~---~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.|++|++||++- ++..+.. ....+......++.+.||...-...+++.. ...+.....|..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~--------------~~~gN~gl~Dq~ 177 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS--------------AAPGNLGLFDQL 177 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCC--------------CCCCcccHHHHH
Confidence 899999999873 2222322 222455557778888888653321111110 112344556778
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEecc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSG 167 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~ 167 (251)
.+++++.+.|. ..+-|+++|.|+|||.||..+..++... ...+..+|..||
T Consensus 178 ~AL~wv~~~I~---~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 178 LALRWVKDNIP---SFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred HHHHHHHHHHH---hcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 88888888887 6788999999999999999987666532 123555565655
No 177
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.04 E-value=0.00028 Score=55.90 Aligned_cols=157 Identities=13% Similarity=0.190 Sum_probs=88.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.-.-||+.|-|+-...-+..++.|+++|+.++.+|--. +-| ...+-++..++
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLR--------------YfW--------------~~rtPe~~a~D 311 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLR--------------YFW--------------SERTPEQIAAD 311 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhh--------------hhh--------------ccCCHHHHHHH
Confidence 34567777877766555668889999999999988431 122 22233334445
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----------------cceEEEeccCCCCcchhhhhhccc
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----------------LGGGAIFSGWVPFNASLIDQFTSD 182 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----------------~~~~i~~~~~~~~~~~~~~~~~~~ 182 (251)
+..++.... ......++.|+|+|+|+-+--.+..+.|.. ..-=+.+.+|+.....-.....+.
T Consensus 312 l~r~i~~y~-~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~ 390 (456)
T COG3946 312 LSRLIRFYA-RRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPD 390 (456)
T ss_pred HHHHHHHHH-HhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchh
Confidence 555554432 223567999999999998776555444422 122345566665543321111111
Q ss_pred ---CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH
Q 025550 183 ---AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234 (251)
Q Consensus 183 ---~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~ 234 (251)
.....+.-++|.+|+-..+. .++..| ++.+..|| ||.|..+.
T Consensus 391 ~~~l~~~~v~CiYG~~e~d~~Cp-------~l~~~~--~~~v~lpG-gHHFd~dy 435 (456)
T COG3946 391 IAKLPLARVQCIYGQEEKDTACP-------SLKAKG--VDTVKLPG-GHHFDGDY 435 (456)
T ss_pred hhhCCcceeEEEecCccccccCC-------cchhhc--ceeEecCC-CcccCccH
Confidence 12234556777665432211 122322 46778998 78776443
No 178
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.98 E-value=7.9e-05 Score=62.05 Aligned_cols=128 Identities=13% Similarity=0.063 Sum_probs=82.4
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEe--cCCCC---CCCchhhhh---hhcCCCcceEEEEccCCCCCCccc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLH--GLGDS---GPANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTC 84 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~H--G~~~~---~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~ 84 (251)
...++..+.+-+.-| ....+.|+++..+ -+.-. ........+ .++.+||.++..|.+|...+.
T Consensus 25 ~MRDGvrL~~dIy~P------a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se--- 95 (563)
T COG2936 25 PMRDGVRLAADIYRP------AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE--- 95 (563)
T ss_pred EecCCeEEEEEEEcc------CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC---
Confidence 345565554433331 2347889999998 33322 111222334 688999999999999876542
Q ss_pred CCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 85 NYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 85 ~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
| .+-... .+..+|-.+.++++.+ + .....+|+.+|.|++|...+++|+..|..+++++.
T Consensus 96 --G----~~~~~~--------~~E~~Dg~D~I~Wia~------Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p 154 (563)
T COG2936 96 --G----VFDPES--------SREAEDGYDTIEWLAK------Q-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAP 154 (563)
T ss_pred --c----ccceec--------cccccchhHHHHHHHh------C-CccCCeeeeecccHHHHHHHHHHhcCCchheeecc
Confidence 1 110000 1234555555666654 2 23457999999999999999999999989999998
Q ss_pred eccCCC
Q 025550 165 FSGWVP 170 (251)
Q Consensus 165 ~~~~~~ 170 (251)
.++..+
T Consensus 155 ~~~~~D 160 (563)
T COG2936 155 TEGLVD 160 (563)
T ss_pred cccccc
Confidence 887554
No 179
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.83 E-value=0.00016 Score=56.53 Aligned_cols=100 Identities=24% Similarity=0.294 Sum_probs=62.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCC---C------cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSP---E------FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~---g------~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~ 105 (251)
..++...++++||+.++-..|..++..|... | |.|+++-.||. .|-+..
T Consensus 148 ~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGy--------------gwSd~~-------- 205 (469)
T KOG2565|consen 148 KKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGY--------------GWSDAP-------- 205 (469)
T ss_pred cCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCc--------------ccCcCC--------
Confidence 3344457899999999998888888877655 2 33344444432 221111
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 106 PKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
...--...+.+ .++.+++ +.+ -++..|-|-.+|..++..+|..+|+.+.|.
T Consensus 206 sk~GFn~~a~A----rvmrkLMlRLg--~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 206 SKTGFNAAATA----RVMRKLMLRLG--YNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred ccCCccHHHHH----HHHHHHHHHhC--cceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 11111122222 2333333 444 568999999999999999999999987665
No 180
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.83 E-value=6.6e-05 Score=61.92 Aligned_cols=108 Identities=21% Similarity=0.275 Sum_probs=71.9
Q ss_pred CCCCCccEEEEEecCCC---CCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 34 QNPMARNFILWLHGLGD---SGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
|..+.+-+|+-+||+|. ++..-+. +..+-.+.|..++.+||..+|+.|+ ++..
T Consensus 391 P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----------------------PRal 447 (880)
T KOG4388|consen 391 PAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF-----------------------PRAL 447 (880)
T ss_pred CCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC-----------------------CcHH
Confidence 33445568899999883 2223233 4445566799999999999888653 3455
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cCCCcceEEEecc
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSG 167 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~ 167 (251)
+.+.-+..|+...-. ..+...+||++.|-|.||.+.+..+++ .-....|+++..+
T Consensus 448 eEv~fAYcW~inn~a---llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 448 EEVFFAYCWAINNCA---LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred HHHHHHHHHHhcCHH---HhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 666666666655444 456678999999999999987766554 2233456655543
No 181
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.81 E-value=0.00032 Score=58.43 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=51.5
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc-C-C------eeEEEEeCCCCCCCC------HHHHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA-G-I------SCEFKAYPGLGHSIS------NEELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-~------~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~ 247 (251)
....+++.||..|.++++..+..+++++.+. + . -+++...||++|... .+.+..+.+|+++=..
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 4579999999999999999999999888764 2 1 288999999999643 4568889999986544
No 182
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.79 E-value=0.00014 Score=59.25 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC------CcceEEEeccCCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR------KLGGGAIFSGWVP 170 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~i~~~~~~~ 170 (251)
........|+..|+...+.. .++++|+||||||.++..+....+. .++++|.+++...
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~--~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN--GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 34455667777777655333 6799999999999999988877643 4889999887543
No 183
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.69 E-value=0.00055 Score=56.98 Aligned_cols=65 Identities=15% Similarity=0.107 Sum_probs=47.1
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHH-------------------h--cC-----C-----eeEEEEeCCCCCCCCHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLE-------------------Q--AG-----I-----SCEFKAYPGLGHSISNE 233 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~-------------------~--~~-----~-----~~~~~~~~g~~H~~~~~ 233 (251)
..+|++..|+.|.+++....+++.+.|+ . .| . ..++..++++||....+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 4799999999999888765554444443 0 01 1 35677788999999988
Q ss_pred HHHHHHHHHHHhhcCC
Q 025550 234 ELRNLESWIKTRMSCS 249 (251)
Q Consensus 234 ~~~~~~~~l~~~l~~~ 249 (251)
.++.+.+.+.+++..+
T Consensus 444 ~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 444 QPAVALTMINRFLRNR 459 (462)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 8888888888887654
No 184
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.64 E-value=0.00053 Score=56.85 Aligned_cols=116 Identities=20% Similarity=0.099 Sum_probs=63.9
Q ss_pred ccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|++|++-|-+.-...+. .+.+...+.|-.++.+..|-. |.+.+-- +... ..-..-..+++
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyY---------G~S~P~~-~~s~------~nL~yLt~~QA 92 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYY---------GKSQPFG-DLST------ENLRYLTSEQA 92 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTS---------TTB-TTG-GGGG------STTTC-SHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhh---------cCCCCcc-ccch------hhHHhcCHHHH
Confidence 688888877553211111 122233334556667777633 4333211 0000 12233567777
Q ss_pred HHHHHHHHHHHH-HcC-CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 116 VRNVHAMIDKEV-AAG-IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
++++..+++.+. +.. .+..+++++|-|+||.++..+-.++|+.+.|.++-|+.+.
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 777777777665 332 2456899999999999999999999999999999888654
No 185
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.60 E-value=0.0034 Score=51.27 Aligned_cols=177 Identities=16% Similarity=0.161 Sum_probs=98.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|++-+.|+.|++-|+.. .+-++.+- .+.+.|.+.+.+-=|.- .+| . . .-..+.++
T Consensus 284 PGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRl-------eGG-a---F------------YlGs~eyE 338 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRL-------EGG-A---F------------YLGSDEYE 338 (511)
T ss_pred CcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeecccc-------ccc-e---e------------eeCcHHHH
Confidence 67889999999999775 55554421 13334555554432210 011 0 0 11222332
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------ 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------ 174 (251)
+.+.+.|++.+ ..+.+.+.++|.|.|||..-|+++++... ..|||.--|.......
T Consensus 339 ---~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDv 413 (511)
T TIGR03712 339 ---QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDI 413 (511)
T ss_pred ---HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccchhhhhccccccCCCCCchHHHh
Confidence 23333444333 77889999999999999999999988753 3455543332221100
Q ss_pred -------------------hhhhhcc-cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH
Q 025550 175 -------------------LIDQFTS-DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234 (251)
Q Consensus 175 -------------------~~~~~~~-~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~ 234 (251)
+.+.+.. .-.++...+.+=.+|.. +......+.+.+.+.++++--+-++| -|. +.
T Consensus 414 l~~~~g~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDY-D~~A~~~L~~~l~~~~~~v~~kG~~G-RHN---Dd 488 (511)
T TIGR03712 414 LLLNTGGTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDY-DPTAFQDLLPYLSKQGAQVMSKGIPG-RHN---DD 488 (511)
T ss_pred HHhhcCCCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccC-CHHHHHHHHHHHHhcCCEEEecCCCC-CCC---CC
Confidence 0011111 22566666666666654 44556678888887776655555554 453 44
Q ss_pred HHHHHHHHHHh
Q 025550 235 LRNLESWIKTR 245 (251)
Q Consensus 235 ~~~~~~~l~~~ 245 (251)
...+..|+..+
T Consensus 489 s~~i~~WF~n~ 499 (511)
T TIGR03712 489 SPTVNSWFINF 499 (511)
T ss_pred chHHHHHHHHH
Confidence 44555555444
No 186
>PLN02606 palmitoyl-protein thioesterase
Probab=97.53 E-value=0.0013 Score=50.72 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=58.5
Q ss_pred cEEEEEecCC--CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 40 NFILWLHGLG--DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 40 ~~vv~~HG~~--~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..||++||.| .....+..+.+.+.. .+..+..+-. +. + ...+|+ ..-.+.+....
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~---------~-~~~s~~-----------~~~~~Qv~~vc 84 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GN---------G-VQDSLF-----------MPLRQQASIAC 84 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CC---------C-cccccc-----------cCHHHHHHHHH
Confidence 4588899999 444566667776652 3665554431 11 0 001111 11123333333
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEecc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSG 167 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~ 167 (251)
+.+.. ...+ .+-+-++|+|+||.++-.++.+.|+ .++.+|.++|
T Consensus 85 e~l~~-~~~L------~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 85 EKIKQ-MKEL------SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred HHHhc-chhh------cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 33333 2211 2348899999999999999998776 4888888876
No 187
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.52 E-value=0.00049 Score=58.98 Aligned_cols=44 Identities=25% Similarity=0.373 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHHHH---Hc--CCC---CCcEEEEEeChhHHHHHHHHH
Q 025550 110 SSLLKAVRNVHAMIDKEV---AA--GID---PNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~---~~--~~~---~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..+.+..+++.+.|+.++ +. +.+ ++.|+++||||||.+|..++.
T Consensus 150 ~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 150 HILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 344455555555555443 22 223 667999999999988875543
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.36 E-value=0.0069 Score=43.36 Aligned_cols=89 Identities=8% Similarity=0.004 Sum_probs=57.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc-CCCCcchhhhhhcccCCCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG-WVPFNASLIDQFTSDAKKT 186 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~ 186 (251)
......+....|..+++.+....-+..++.++|||+|..++-.++...+..+..++.+++ .+.... ...+.. ...
T Consensus 83 ~~~~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~--a~~l~~--~~~ 158 (177)
T PF06259_consen 83 SPGYARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS--ASDLGV--PPG 158 (177)
T ss_pred CchHHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC--HHHcCC--CCC
Confidence 344456667777777776653334567899999999999998777665666777776654 332221 111211 236
Q ss_pred CEEEEccCCCCccc
Q 025550 187 PILWSHGMADRTVL 200 (251)
Q Consensus 187 p~l~~~g~~D~~~~ 200 (251)
.++...+.+|.+-.
T Consensus 159 ~v~a~~a~~D~I~~ 172 (177)
T PF06259_consen 159 HVYAMTAPGDPIAY 172 (177)
T ss_pred cEEEeeCCCCCccc
Confidence 68888999887643
No 189
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.36 E-value=0.011 Score=46.78 Aligned_cols=186 Identities=13% Similarity=0.156 Sum_probs=113.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...|+|+++-+.|.............++.|+.++.+-.|-.... |.. .........+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~------------~~~----------s~~~~sl~~~~ 94 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVF------------LSA----------SRRILSLSLAS 94 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccc------------ccc----------ccccchhhHHH
Confidence 34466666666555555444577788889999988777643221 100 11112223333
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHH---Hhc--C---CCcceEEEeccCCCC---------------cc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASV---LLY--P---RKLGGGAIFSGWVPF---------------NA 173 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a---~~~--p---~~~~~~i~~~~~~~~---------------~~ 173 (251)
..+..++. ..+.++.++.+--+|+||...+... ... | +...+++..+..... ..
T Consensus 95 ~~l~~L~~---~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~ 171 (350)
T KOG2521|consen 95 TRLSELLS---DYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDD 171 (350)
T ss_pred HHHHHHhh---hccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchh
Confidence 44544444 4557788999999999998766443 222 2 124444443321110 00
Q ss_pred h----------------------------------------hhhhhcccC--CCCCEEEEccCCCCcccchhcccchHHH
Q 025550 174 S----------------------------------------LIDQFTSDA--KKTPILWSHGMADRTVLFEAGQAGPPFL 211 (251)
Q Consensus 174 ~----------------------------------------~~~~~~~~~--~~~p~l~~~g~~D~~~~~~~~~~~~~~l 211 (251)
. +...+.... ...+.+.+.+..|.+++.+..+++.+..
T Consensus 172 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~ 251 (350)
T KOG2521|consen 172 YVARWARLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALR 251 (350)
T ss_pred hHHHHHhcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHH
Confidence 0 000000111 3677888889999999999999999999
Q ss_pred HhcCCeeEEEEeCCCCCCC-----CHHHHHHHHHHHHHhhc
Q 025550 212 EQAGISCEFKAYPGLGHSI-----SNEELRNLESWIKTRMS 247 (251)
Q Consensus 212 ~~~~~~~~~~~~~g~~H~~-----~~~~~~~~~~~l~~~l~ 247 (251)
++.|..++-.-+.+..|.. .........+|++....
T Consensus 252 ~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 252 REKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred HhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 9999998888888887754 34557788888887664
No 190
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.36 E-value=0.0027 Score=46.05 Aligned_cols=27 Identities=41% Similarity=0.630 Sum_probs=24.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPRK 158 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~ 158 (251)
..+.+.++.||.||...+.+..+.|+.
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCc
Confidence 567899999999999999999998853
No 191
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.31 E-value=0.002 Score=44.39 Aligned_cols=79 Identities=15% Similarity=0.062 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC------CcceEEEeccCCCCcchhhhhhcccCCCCCEEEE
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR------KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWS 191 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~ 191 (251)
.+.+.+.++.+.. ...++.+.|||+||.+|..++....+ ....++.+++.-.....+....... ....++-+
T Consensus 49 ~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~-~~~~~~~i 126 (140)
T PF01764_consen 49 QILDALKELVEKY-PDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSL-FNRNIFRI 126 (140)
T ss_dssp HHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHH-TSCGEEEE
T ss_pred HHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhh-CCCeEEEE
Confidence 4444444443222 24799999999999999988776321 2223344444333333333333211 11246666
Q ss_pred ccCCCCc
Q 025550 192 HGMADRT 198 (251)
Q Consensus 192 ~g~~D~~ 198 (251)
.-..|.+
T Consensus 127 v~~~D~V 133 (140)
T PF01764_consen 127 VNQNDIV 133 (140)
T ss_dssp EETTBSG
T ss_pred EECCCEe
Confidence 6667754
No 192
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.25 E-value=0.0045 Score=47.93 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.1
Q ss_pred cEEEEEeChhHHHHHHHHHhcCC--CcceEEEecc
Q 025550 135 NVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSG 167 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~ 167 (251)
-+-++|||+||.++-.++.+-|+ .++.+|+++|
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 48899999999999999998876 4899998886
No 193
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.22 E-value=0.0073 Score=47.59 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=75.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc------------------CCCCc------chhhhhhc------
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG------------------WVPFN------ASLIDQFT------ 180 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~------------------~~~~~------~~~~~~~~------ 180 (251)
+..+...+.|-|--|+.++..|...|+ +.+++.+.- ..+.. +.+.+.+.
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDpr-v~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkq 309 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPR-VFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQ 309 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcc-hhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHH
Confidence 345689999999999999999999984 666654432 11100 00000000
Q ss_pred ---------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHH
Q 025550 181 ---------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLE 239 (251)
Q Consensus 181 ---------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~ 239 (251)
......|-+++.++.|.+..++++.-+++.|.. ...+...|+..|...+..+.+.+
T Consensus 310 L~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG---~kaLrmvPN~~H~~~n~~i~esl 380 (507)
T COG4287 310 LLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPG---EKALRMVPNDPHNLINQFIKESL 380 (507)
T ss_pred HHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCC---ceeeeeCCCCcchhhHHHHHHHH
Confidence 124778999999999999999999999999976 45788899999998876655433
No 194
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.21 E-value=0.0054 Score=46.15 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=58.7
Q ss_pred cEEEEEecCCCCCCC--chhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 40 NFILWLHGLGDSGPA--NEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~--~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..+|++||.+.+..+ +..+.+.+.+ -|..++.++.-. | ...+| ...+.+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~----------g-~~~s~---------------l~pl~~Qv 77 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGD----------G-IKDSS---------------LMPLWEQV 77 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecC----------C-cchhh---------------hccHHHHH
Confidence 458889999987766 5556665544 356666666421 1 11222 12233334
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEecc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSG 167 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~ 167 (251)
+.+.+.+.. ..--.+-+.++|.|+||.++-.++..-++ .++..|+++|
T Consensus 78 ~~~ce~v~~---m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 78 DVACEKVKQ---MPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred HHHHHHHhc---chhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 444444431 11124568899999999999877766443 4777787776
No 195
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.12 E-value=0.00079 Score=43.74 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=43.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH---HH-HHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN---EE-LRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---~~-~~~~~~~l~ 243 (251)
...|+|++.++.|+.+|.+.++.+.+.|.. .+++..+|.||.... .- .+.+.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 459999999999999999998888888865 388999999998652 22 344556654
No 196
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.01 E-value=0.0033 Score=46.96 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~ 169 (251)
.....+++.+..+++. ..+++.+.|||.||.+|.+++...+ +++..+..+.|..
T Consensus 66 ~~q~~A~~yl~~~~~~------~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 66 PQQKSALAYLKKIAKK------YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHHHHh------CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3445566666665552 1336999999999999999888743 4678888777743
No 197
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.80 E-value=0.014 Score=44.78 Aligned_cols=53 Identities=23% Similarity=0.254 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEecc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSG 167 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~ 167 (251)
+...++.+.+.+.. ...+ .+-+.++|+|+||.+.-.++.+.|+ .++.+|+++|
T Consensus 61 v~~Qv~~vc~~l~~--~p~L-~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 61 VNDQVEQVCEQLAN--DPEL-ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp HHHHHHHHHHHHHH---GGG-TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred HHHHHHHHHHHHhh--Chhh-hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 34444455554443 1222 1468999999999999999988764 5889999887
No 198
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.77 E-value=0.016 Score=43.66 Aligned_cols=64 Identities=20% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
+..++.+.|||+||.+|..++... +..+.++. +++.......+.... .....-++-+.-.+|.+
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~t-Fg~P~vg~~~~a~~~--~~~~~~~~rvv~~~D~V 194 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYT-FGQPRVGNAAFAEYL--ESTKGRVYRVVHGNDIV 194 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEE-eCCCCCCCHHHHHHh--hccCCCEEEEEECCCcc
Confidence 457899999999999999887753 22344444 444332333332211 12234455566667754
No 199
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.71 E-value=0.023 Score=46.66 Aligned_cols=120 Identities=16% Similarity=0.055 Sum_probs=79.5
Q ss_pred CCCccEEEEEecCCCCCCCchh-----hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSGPANEP-----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
....|+.+++-|-|.-...|.. +..+.++.|-.++.+..|-.+.+ .+ ..+. ....-..-
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S---------~P----~~~~---st~nlk~L 146 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQS---------SP----IGDL---STSNLKYL 146 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccC---------CC----CCCC---cccchhhh
Confidence 3456888899887765544422 44455566777777777643322 10 0000 00122345
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCC-CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGID-PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
...+++.++..+|+.+. +.+.. ..+.+.+|-|+-|.++.++=..+|+.+.|.++-|+.+..
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 56777888888887765 55553 359999999999999999999999999998888886543
No 200
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.69 E-value=0.0054 Score=49.91 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=37.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 157 (251)
+.+...+....++..++...+.+ +.++++|++|||||.+..++....++
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~-G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLN-GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHc-CCCceEEEecCCccHHHHHHHhcccc
Confidence 44556666777888777654333 34899999999999999999888776
No 201
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.69 E-value=0.0052 Score=51.74 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=54.2
Q ss_pred chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCC
Q 025550 55 NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPN 134 (251)
Q Consensus 55 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 134 (251)
|..+++.|...||.. .++.++| ++|-- .....+........|+..|+...+.+ ..+
T Consensus 158 w~kLIe~L~~iGY~~--~nL~gAP------------YDWRl---------s~~~le~rd~YF~rLK~lIE~ay~~n-ggk 213 (642)
T PLN02517 158 WAVLIANLARIGYEE--KNMYMAA------------YDWRL---------SFQNTEVRDQTLSRLKSNIELMVATN-GGK 213 (642)
T ss_pred HHHHHHHHHHcCCCC--Cceeecc------------ccccc---------CccchhhhhHHHHHHHHHHHHHHHHc-CCC
Confidence 366888888888863 3333221 23310 01122333445566777777654322 257
Q ss_pred cEEEEEeChhHHHHHHHHHhcC---------------CCcceEEEeccC
Q 025550 135 NVFVCGFSQGGALTLASVLLYP---------------RKLGGGAIFSGW 168 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p---------------~~~~~~i~~~~~ 168 (251)
+++|+||||||.+++.+..... ..|++.|.++|.
T Consensus 214 KVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 214 KVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred eEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 9999999999999998765321 126777877773
No 202
>PLN02454 triacylglycerol lipase
Probab=96.68 E-value=0.021 Score=46.38 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcC-------C-CcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYP-------R-KLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-------~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
+.+.+...++.++ ++.-..-+|.+.|||+||.+|..+|.... . .+.. +.+++.---...+.+.+... ..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~-~TFGsPRVGN~~Fa~~~~~~-~~ 285 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTA-IVFGSPQVGNKEFNDRFKEH-PN 285 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEE-EEeCCCcccCHHHHHHHHhC-CC
Confidence 3444445555444 22211125999999999999998885421 1 2333 44444333333443333221 13
Q ss_pred CCEEEEccCCCCc
Q 025550 186 TPILWSHGMADRT 198 (251)
Q Consensus 186 ~p~l~~~g~~D~~ 198 (251)
..++-+.-..|.+
T Consensus 286 ~rvlrVvN~~DiV 298 (414)
T PLN02454 286 LKILHVRNTIDLI 298 (414)
T ss_pred ceEEEEecCCCee
Confidence 4455555666754
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.51 E-value=0.0065 Score=43.82 Aligned_cols=116 Identities=13% Similarity=0.118 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--c----CCCcceEEEeccCCCCcchhhhhhccc
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--Y----PRKLGGGAIFSGWVPFNASLIDQFTSD 182 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~----p~~~~~~i~~~~~~~~~~~~~~~~~~~ 182 (251)
..+..+.+..+...+...... .+..+++|+|+|+|+.++..++.. . .+++.++++++-........ .. ..
T Consensus 57 ~~S~~~G~~~~~~~i~~~~~~-CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~--~~-~~ 132 (179)
T PF01083_consen 57 GDSVAAGVANLVRLIEEYAAR-CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP--GI-PG 132 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT--TB-TC
T ss_pred cccHHHHHHHHHHHHHHHHHh-CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc--cc-Cc
Confidence 355666677777777765433 245799999999999999988877 2 24578888776543321111 11 11
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhc
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTRMS 247 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~ 247 (251)
...-.++-++-..|.+.... ...+ ..|.-. .+..++..+|+.+.|+
T Consensus 133 ~~~~~~~~~C~~gD~vC~~~-~~~~------------------~~H~~Y~~~~~~~aa~fv~~~l~ 179 (179)
T PF01083_consen 133 DYSDRVRSYCNPGDPVCDAS-GGSL------------------AAHLSYFNDYGDEAAQFVVSRLQ 179 (179)
T ss_dssp SCGGGEEEE-BTT-GGGGTS-SSSC------------------HHHGSHHHHHHHHHHHHHHHHH-
T ss_pred ccccceeEEcCCCCcccCCC-CCCc------------------hhhhCcccccHHHHHHHHHHhcC
Confidence 12345888888888876411 1111 125432 3347778888887763
No 204
>PLN02408 phospholipase A1
Probab=96.49 E-value=0.017 Score=46.14 Aligned_cols=62 Identities=21% Similarity=0.122 Sum_probs=35.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCC-----cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 134 NNVFVCGFSQGGALTLASVLLYPRK-----LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~p~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
.+|.+.|||+||.+|..+|...... .-.++.+++.---...+.+.+.. ....++=+.-..|.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~--~~~~~lRVvN~~D~ 266 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEK--QGTKVLRIVNSDDV 266 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHh--cCCcEEEEEeCCCC
Confidence 4699999999999999887653211 12245555433334444444422 23445555555564
No 205
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.15 Score=38.73 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=23.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPRKL 159 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~~ 159 (251)
.-.+..|+|-||||.++......++..+
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pv 220 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPV 220 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCc
Confidence 3468999999999999999888766543
No 206
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.43 E-value=0.011 Score=34.35 Aligned_cols=50 Identities=20% Similarity=0.160 Sum_probs=29.2
Q ss_pred ceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch
Q 025550 6 PIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE 56 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~ 56 (251)
|.....+...|+-.+..+.++.+.. ..+...++|+|++.||..+++..|.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~-~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKN-SSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTT-CTTTTTT--EEEEE--TT--GGGGC
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCC-CcccCCCCCcEEEECCcccChHHHH
Confidence 4456677788888888888876542 2245678899999999998887763
No 207
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.34 E-value=0.039 Score=45.50 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc-----------------C-----CeeEEEEeCCCCCCCCHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA-----------------G-----ISCEFKAYPGLGHSISNEELRNLESW 241 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-----------------~-----~~~~~~~~~g~~H~~~~~~~~~~~~~ 241 (251)
...+||+.+|..|.+++....+.+.+.|.=. | ...++..+.++||....+.++...+.
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 4499999999999999865544444433211 0 13668889999999988888888888
Q ss_pred HHHhhc
Q 025550 242 IKTRMS 247 (251)
Q Consensus 242 l~~~l~ 247 (251)
|+++++
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 888775
No 208
>PLN02802 triacylglycerol lipase
Probab=96.16 E-value=0.028 Score=46.61 Aligned_cols=63 Identities=24% Similarity=0.184 Sum_probs=35.6
Q ss_pred CcEEEEEeChhHHHHHHHHHhc----CCC-cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLLY----PRK-LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~----p~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.+.|||+||.+|..+|... +.. ...++.+++.--....+.+.+. .....++=+.-..|.+
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~--~~~~~~~RVVN~~DiV 397 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLN--ARGVKVLRVVNAQDVV 397 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHH--hcCCcEEEEecCCCee
Confidence 4799999999999999877643 221 1124445543333344444442 1234455555566643
No 209
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.04 E-value=0.047 Score=43.45 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCC-----cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCccc
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRK-----LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
....+|.|+|||+|+.+.+.+.....++ +..++++++..+.......... ......+.-++.++|.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r-~vVsGr~vN~YS~~D~vL~ 290 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIR-SVVSGRLVNVYSENDWVLG 290 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHH-HHccCeEEEEecCcHHHHH
Confidence 3555799999999999998777654433 6788888887766544333322 3367889999999998744
No 210
>PLN02571 triacylglycerol lipase
Probab=96.01 E-value=0.016 Score=47.06 Aligned_cols=20 Identities=30% Similarity=0.566 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHh
Q 025550 135 NVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+|.+.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 69999999999999988764
No 211
>PLN02162 triacylglycerol lipase
Probab=96.00 E-value=0.076 Score=43.72 Aligned_cols=22 Identities=27% Similarity=0.270 Sum_probs=18.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+..++.+.|||+||.+|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 3568999999999999988754
No 212
>PLN02324 triacylglycerol lipase
Probab=95.98 E-value=0.078 Score=43.11 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 025550 134 NNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
-+|.+.|||+||.+|...|..
T Consensus 215 ~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988754
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.78 E-value=0.048 Score=40.00 Aligned_cols=44 Identities=23% Similarity=0.126 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
..-+..++.+..+..++..-+..+++|+|||+|+.+...+...+
T Consensus 73 ~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 73 FDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 33334444444444332222457899999999999999988764
No 214
>PLN02310 triacylglycerol lipase
Probab=95.73 E-value=0.1 Score=42.35 Aligned_cols=63 Identities=21% Similarity=0.158 Sum_probs=36.2
Q ss_pred CcEEEEEeChhHHHHHHHHHh----cCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.+.|||+||.+|...|.. .+.....++.+++.--....+.+.+.. ....++=+.-..|.+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~--~~~~~~RVvn~~DiV 275 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNE--LGVKTLRVVVKQDKV 275 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHh--cCCCEEEEEECCCcc
Confidence 479999999999999987754 233223355555533333333333322 234455555566644
No 215
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.65 E-value=0.018 Score=46.27 Aligned_cols=57 Identities=21% Similarity=0.200 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
..++++++...++..+. ..+....+|+.+|-|+||+++.++=++||..+.|.++-|.
T Consensus 143 tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 143 TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 34555566656665554 3344567899999999999999999999987776655444
No 216
>PLN00413 triacylglycerol lipase
Probab=95.62 E-value=0.12 Score=42.63 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=38.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh----c----CCCcceEEEeccCCCCcchhhhhhccc--CCCCCEEEEccCCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLL----Y----PRKLGGGAIFSGWVPFNASLIDQFTSD--AKKTPILWSHGMADRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~----~----p~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~l~~~g~~D~~ 198 (251)
+..++.+.|||+||.+|..++.. . ..++..+..+++.--....+...+... ....+.+=+.-.+|.+
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~FA~~~~~~l~~~~~~~~RvVn~~DiV 358 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDEDFGIFMKDKLKEFDVKYERYVYCNDMV 358 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHHHHHHHHhhhcccCcceEEEEECCCcc
Confidence 45689999999999999987742 1 123445666665433333333333221 1234455555666754
No 217
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.62 E-value=0.066 Score=44.65 Aligned_cols=63 Identities=19% Similarity=0.130 Sum_probs=37.1
Q ss_pred CcEEEEEeChhHHHHHHHHHh----cCCC-cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLL----YPRK-LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~----~p~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.|.|||+||.+|...|.. .|.. ...++.+++.--....+...+.. ....++=+.-..|.+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~--l~~~~lRVVN~~DiV 385 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNE--LGVKVLRVVNKQDIV 385 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHh--cCCCEEEEEECCCcc
Confidence 479999999999999988754 2322 12344454433333333333322 245667666677754
No 218
>PLN02209 serine carboxypeptidase
Probab=95.40 E-value=0.16 Score=42.12 Aligned_cols=59 Identities=22% Similarity=0.136 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWVP 170 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~~ 170 (251)
.+..+....|..+++. -......++.|+|-|+||..+..+|.. + +-.++++++.+|+.+
T Consensus 145 ~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 145 SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 3344444555544432 122344689999999999977766643 1 113788888888664
No 219
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.37 E-value=0.11 Score=42.80 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=64.4
Q ss_pred cEEEEEecCCC-CCCCchhh--hhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 40 NFILWLHGLGD-SGPANEPI--KTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 40 ~~vv~~HG~~~-~~~~~~~~--~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
-++|++-|+|- ++..-..+ .+.|+. ....++.+.||..+- |.- .+.. .....+....-|-.-+
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~F-------GFL---~l~~---~~eaPGNmGl~DQqLA 202 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAF-------GFL---YLPG---HPEAPGNMGLLDQQLA 202 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccc-------eEE---ecCC---CCCCCCccchHHHHHH
Confidence 38889999773 22222222 223333 344556677764422 100 0000 0012234455666777
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEeccCC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSGWV 169 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~~~ 169 (251)
+.++++.|. ..+-++++|.|+|-|.|+.-+..-...-+ ..++.+|+-||.+
T Consensus 203 l~WV~~Ni~---aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 203 LQWVQENIA---AFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHhHH---HhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 888888777 67889999999999999876543322221 2366667777644
No 220
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.05 E-value=0.16 Score=42.18 Aligned_cols=63 Identities=22% Similarity=0.093 Sum_probs=39.9
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----C-eeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----I-SCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~-~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..+||+..|+.|.+++.-..+.+.+.|+=. | . ..++..+.++||... ..++...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 468888888888888876655555554311 1 1 256677778888774 35666666666
Q ss_pred HhhcC
Q 025550 244 TRMSC 248 (251)
Q Consensus 244 ~~l~~ 248 (251)
+++..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 66543
No 221
>PLN02753 triacylglycerol lipase
Probab=95.03 E-value=0.055 Score=45.14 Aligned_cols=22 Identities=36% Similarity=0.428 Sum_probs=19.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 025550 133 PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
..+|.+.|||+||.+|..+|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4589999999999999988753
No 222
>PLN02934 triacylglycerol lipase
Probab=94.98 E-value=0.056 Score=44.93 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
.+...++.+++.. +..++.+.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 3444444443222 4468999999999999998864
No 223
>PLN02761 lipase class 3 family protein
Probab=94.85 E-value=0.066 Score=44.67 Aligned_cols=20 Identities=35% Similarity=0.471 Sum_probs=17.9
Q ss_pred CcEEEEEeChhHHHHHHHHH
Q 025550 134 NNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~ 153 (251)
-+|.+.|||+||.+|...|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 47999999999999998775
No 224
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.62 E-value=0.28 Score=36.79 Aligned_cols=43 Identities=26% Similarity=0.369 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+++.+.++.+.+.+.... -..++++++|+|+|+.++...+.+
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~---~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAI---AAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred chHHHHHHHHHHHHHHhhc---cCCCCEEEEEECHHHHHHHHHHHH
Confidence 4667777777777776421 156789999999999999877655
No 225
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.55 E-value=0.26 Score=40.90 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~ 169 (251)
.|+....+.+.+.+.+. .-...+..|+|-|+||.-+..+|..--+ ..++++.+++.+
T Consensus 177 ~D~~~~~~~f~~~fp~~---~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 177 KDVYSFLRLFFDKFPHY---ARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hhHHHHHHHHHHHHHHH---hhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 44444444444444432 2223588999999999988877755332 355555555544
No 226
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.52 E-value=0.099 Score=38.64 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=26.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 133 PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.++|.|+++|||-.+|..+....| ++..++++|..
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 468999999999999887754433 56667777733
No 227
>PLN02719 triacylglycerol lipase
Probab=94.47 E-value=0.091 Score=43.78 Aligned_cols=21 Identities=38% Similarity=0.444 Sum_probs=18.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 025550 134 NNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+|.+.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999987753
No 228
>PLN02847 triacylglycerol lipase
Probab=93.73 E-value=0.17 Score=43.03 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=19.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh
Q 025550 132 DPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.-++.++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 44589999999999999877654
No 229
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.47 E-value=0.29 Score=37.61 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+..+|.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 5579999999999999998887764
No 230
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.47 E-value=0.29 Score=37.61 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+..+|.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 5579999999999999998887764
No 231
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.05 E-value=0.91 Score=42.17 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=63.0
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.....|.++|+|-.-+.......++..+. +..+.+-+- .......++.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle---~PaYglQ~T-----------------------------~~vP~dSies 2166 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE---IPAYGLQCT-----------------------------EAVPLDSIES 2166 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC---Ccchhhhcc-----------------------------ccCCcchHHH
Confidence 45667899999998777767777666543 333332221 1223455666
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~ 167 (251)
..+...+.+++++ +..+.-++|+|+|+.++..+|.... +....+|++.|
T Consensus 2167 ~A~~yirqirkvQ----P~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2167 LAAYYIRQIRKVQ----PEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred HHHHHHHHHHhcC----CCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 6666666555332 4568899999999999998886532 33556787776
No 232
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.97 E-value=3.4 Score=34.57 Aligned_cols=63 Identities=19% Similarity=0.131 Sum_probs=42.7
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCC---------------------eeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGI---------------------SCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
.++++..|+.|.++|....+.+.+.|.-... ...+..+.|+||....+..+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999998777666555542110 1456778899998775555555555555
Q ss_pred hhcC
Q 025550 245 RMSC 248 (251)
Q Consensus 245 ~l~~ 248 (251)
++..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 5543
No 233
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.64 E-value=0.59 Score=37.48 Aligned_cols=22 Identities=36% Similarity=0.507 Sum_probs=19.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 025550 133 PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.-+|.+.|||+||.+|..+|..
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHH
Confidence 5589999999999999987764
No 234
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.49 E-value=6.5 Score=30.67 Aligned_cols=24 Identities=21% Similarity=0.355 Sum_probs=20.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
-+.++|.++|+|-|++.|-.++..
T Consensus 89 ~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 89 EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CCcceEEEEecCccHHHHHHHHHH
Confidence 356789999999999999877754
No 235
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=89.71 E-value=0.35 Score=34.99 Aligned_cols=61 Identities=18% Similarity=0.236 Sum_probs=41.4
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--CC-----HHHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--IS-----NEELRNLESWIKT 244 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~~-----~~~~~~~~~~l~~ 244 (251)
.+++++-+-|++|.+....++.+..+.+..... ....++.+|+||. |. .+....+.+||.+
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 568899999999999998887665555544322 2566778999994 22 2334556666654
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=89.11 E-value=2 Score=28.88 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=22.2
Q ss_pred CCCCccEEEEEecCCCCCCCchh--hhhh
Q 025550 35 NPMARNFILWLHGLGDSGPANEP--IKTL 61 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~--~~~~ 61 (251)
.++++|+|+-+||+.+++.+|.. +++.
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ 76 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEH 76 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHH
Confidence 46788999999999999999866 5554
No 237
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=89.06 E-value=1 Score=37.89 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHH-H-cCCCCCcEEEEEeChhHHHHHHHHHhc----C------CCcceEEEeccCC
Q 025550 114 KAVRNVHAMIDKEV-A-AGIDPNNVFVCGFSQGGALTLASVLLY----P------RKLGGGAIFSGWV 169 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p------~~~~~~i~~~~~~ 169 (251)
+.++++..+++... + ......++.|+|+|+||..+..+|.+- . -.++++++-.|+.
T Consensus 149 ~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 149 EVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 33444444444333 1 123457899999999999998777652 1 1367877776644
No 238
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.06 E-value=6 Score=31.31 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=18.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+.++|.++|+|-|+.++--+|.
T Consensus 120 pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 120 PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred CCCeEEEeeccchhHHHHHHHH
Confidence 5689999999999999876664
No 239
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=87.45 E-value=1.7 Score=28.67 Aligned_cols=37 Identities=14% Similarity=-0.083 Sum_probs=18.8
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP 57 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~ 57 (251)
.-++..++..... ..+++...||++||+.++-..|..
T Consensus 74 ~I~g~~iHFih~r-------s~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 74 EIDGLDIHFIHVR-------SKRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp EETTEEEEEEEE---------S-TT-EEEEEE--SS--GGGGHH
T ss_pred EEeeEEEEEEEee-------CCCCCCeEEEEECCCCccHHhHHh
Confidence 3356666664444 244556689999999987655544
No 240
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.14 E-value=2.8 Score=35.95 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCC-CCcEEEEEeChhHHHHHHHHHh
Q 025550 121 AMIDKEVAAGID-PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 121 ~~i~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+++.+.+.++. ..+|+.+||||||.++=.+...
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 344444356664 6789999999999988665543
No 241
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=85.67 E-value=1.3 Score=36.92 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cC------CCcceEEEeccCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YP------RKLGGGAIFSGWV 169 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p------~~~~~~i~~~~~~ 169 (251)
+.....+....|..++++ -.......+.|.|-|++|..+-.+|.. +. --++|+++-.|.+
T Consensus 144 D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred cHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 444555556666666653 233456789999999999888777653 21 1377887766644
No 242
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=84.72 E-value=2.4 Score=34.64 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=68.8
Q ss_pred CCCccEEEEEecCCCCCC-CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGP-ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|+|+.--|++.... ........+..+. +.+.++-- +.|.++- .+...-++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld~NQ---l~vEhRfF---------~~SrP~p-----------~DW~~Lti~Q 116 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLDGNQ---LSVEHRFF---------GPSRPEP-----------ADWSYLTIWQ 116 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhccce---EEEEEeec---------cCCCCCC-----------CCcccccHhH
Confidence 345788988889886432 2233555554332 33444311 2111111 1224456777
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
++.+...+++.+.. +=+++.+-.|-|=||+.+++.=.-+|+.+.+.|......+
T Consensus 117 AA~D~Hri~~A~K~--iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 117 AASDQHRIVQAFKP--IYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred hhHHHHHHHHHHHh--hccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 77777777776531 2256899999999999998877779999999998776544
No 243
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=84.26 E-value=18 Score=28.38 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--C-----CHHHHHHHHHHHHHhhcC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--I-----SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~-----~~~~~~~~~~~l~~~l~~ 248 (251)
.++-++-+-|++|.+--..+.++..+.+..--. ..+...-+++||. | ..+....+.+|+.++-+.
T Consensus 338 ~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 338 TNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred eceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 567788899999998777666544443332111 1445667899994 2 234467788888877543
No 244
>PLN02209 serine carboxypeptidase
Probab=83.86 E-value=2.4 Score=35.43 Aligned_cols=64 Identities=23% Similarity=0.148 Sum_probs=46.7
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----Ce-eEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----IS-CEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..++++..|+.|.+++....+.+.+.|+=. | .. .++..+.|+||... ..++...+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 579999999999999987666666666411 1 12 67778889999884 56777777777
Q ss_pred HhhcCC
Q 025550 244 TRMSCS 249 (251)
Q Consensus 244 ~~l~~~ 249 (251)
+++...
T Consensus 430 ~fi~~~ 435 (437)
T PLN02209 430 RWISGQ 435 (437)
T ss_pred HHHcCC
Confidence 776543
No 245
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=83.58 E-value=2.3 Score=33.87 Aligned_cols=64 Identities=22% Similarity=0.093 Sum_probs=46.0
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----C-eeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----I-SCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~-~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..+||+..|+.|.+++.-..+.+.+.|+=. | . ..++..+.|+||... ..++...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 589999999999999876666666655411 1 1 267777889999885 46777777777
Q ss_pred HhhcCC
Q 025550 244 TRMSCS 249 (251)
Q Consensus 244 ~~l~~~ 249 (251)
+++..+
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 777643
No 246
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=83.51 E-value=27 Score=29.77 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcchhhhhhcccCCCC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNASLIDQFTSDAKKT 186 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 186 (251)
.+.+.+..+....+.+.+...+.-+-+|+..|.---.--+..+..+. .+.+.+++.....+.....+.+.. ...++
T Consensus 15 ~~~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~~i~~~--~~l~~ 92 (484)
T cd03557 15 EEALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKMWIAGL--TALQK 92 (484)
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHHHHHHH--HHcCC
Confidence 34445555555555554322221234666666555444444444443 256999998888777666555543 45789
Q ss_pred CEEEEccCCCCcccchh--------------cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 187 PILWSHGMADRTVLFEA--------------GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~--------------~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
|+++++--.-..+|.+. ..++...+++.|++.+++. ||.-..+..+++.+|++-.
T Consensus 93 PvL~~~~q~~~~l~~~sidmd~m~l~qaahG~~e~~~il~R~gi~~~~v~----G~~~d~~~~~~i~~w~raa 161 (484)
T cd03557 93 PLLHLHTQFNREIPWDTIDMDFMNLNQSAHGDREFGFIGSRMRIPRKVVV----GHWQDPEVHEKIGDWMRAA 161 (484)
T ss_pred CEEEEccCCCccCCCCCccchHHhhhhhcCCcHHHHHHHHHcCCCeeEEE----EeCCCHHHHHHHHHHHHHH
Confidence 99998876533333222 1233446777888877664 7887777788888888643
No 247
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=83.11 E-value=25 Score=29.04 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHH--HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 116 VRNVHAMIDKEV--AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 116 ~~~l~~~i~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
-+.+.+.+.... ....|++++++.+.+-++.-+++..+..|. .+-+| =.|+.+....-.. +...-.-+|+....
T Consensus 127 rqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpg-dafLv-PtPyY~gfdrdl~-~rTgveivpv~c~S- 202 (471)
T KOG0256|consen 127 RQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPG-DAFLV-PTPYYPGFDRDLR-WRTGVEIVPVHCSS- 202 (471)
T ss_pred HHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCC-ceeee-cCCCCCcccccce-eccCceEEEEEeec-
Confidence 333444444433 334589999999999999988888888874 22233 3333332211111 11111112333222
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
++-..+..+.-+..++..++.+.+++-+++.+ .|-.+..+....+.+|..+
T Consensus 203 s~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~ 257 (471)
T KOG0256|consen 203 SNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASR 257 (471)
T ss_pred CCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh
Confidence 22233445555556666667788888877765 2334568888999998865
No 248
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=82.90 E-value=0.75 Score=37.97 Aligned_cols=59 Identities=22% Similarity=0.292 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHH-H-cCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCCC
Q 025550 112 LLKAVRNVHAMIDKEV-A-AGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWVP 170 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~-~-~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~~ 170 (251)
..++++++..++.... + ......++.|+|-|+||..+..+|.. . +-.++++++.+|++.
T Consensus 112 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 112 DDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred hhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 3444555555554443 2 22345689999999999988777653 2 223889999888665
No 249
>PF03283 PAE: Pectinacetylesterase
Probab=82.31 E-value=2.7 Score=34.11 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHH
Q 025550 119 VHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASV 152 (251)
Q Consensus 119 l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a 152 (251)
++++++.+...++ +.++|+|.|.|.||..++..+
T Consensus 140 ~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 3344444433333 578999999999999887654
No 250
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=81.12 E-value=16 Score=26.47 Aligned_cols=38 Identities=13% Similarity=0.364 Sum_probs=31.1
Q ss_pred CCCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEE
Q 025550 36 PMARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWS 73 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~ 73 (251)
...++.+||+-|.++++..-.. +.+.|.+.|+.++.+|
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3566899999999998877544 5668888999999998
No 251
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=79.82 E-value=3.2 Score=33.76 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=16.2
Q ss_pred CCcEEEEEeChhHHHHHHHH
Q 025550 133 PNNVFVCGFSQGGALTLASV 152 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a 152 (251)
.++|-.+|||+||.++.++.
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 46899999999998776544
No 252
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=79.65 E-value=11 Score=29.99 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCCCCc
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~~~~ 172 (251)
....+....|..+++. -......++.|.|-|+||..+..+|.. + +-.++|+++-.|+....
T Consensus 29 ~~a~d~~~fL~~Ff~~--~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 29 SEVKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred HHHHHHHHHHHHHHHh--CcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 3334555555555542 223456789999999999988777754 2 11478888888877643
No 253
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=79.17 E-value=4.3 Score=33.94 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~ 169 (251)
..+....+..++.. .......++.|+|-|+||..+..+|.. + +-.++|+++-.|+.
T Consensus 145 a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 145 VKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHh--ChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 34444555554442 122245689999999999977766653 1 11477888777744
No 254
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.29 E-value=8.5 Score=32.56 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=42.9
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.......+|.|+|||.|+.+.+...... -..+..+++++...+.......... .-....+.-.+.++|.+
T Consensus 441 ~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k~r-~vVsGRFVNgYs~nDW~ 515 (633)
T KOG2385|consen 441 KRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLKAR-SVVSGRFVNGYSTNDWT 515 (633)
T ss_pred HhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHHHH-hheecceeeeeecchHH
Confidence 3344567899999999999988665532 2347888888887776554322211 11233444555555544
No 255
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=74.71 E-value=48 Score=27.48 Aligned_cols=110 Identities=14% Similarity=0.067 Sum_probs=61.0
Q ss_pred cCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCC------CcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 47 GLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG------AVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 47 G~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g------~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.-.++ ..+..+.+.+.+.|..++.+|.-..+......... .....|-.... .......+..+.+.+
T Consensus 8 gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~------~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 8 GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRS------SGDRGEAIEAMARGA 81 (403)
T ss_pred EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhc------cCCHHHHHHHHHHHH
Confidence 433333 34555677888899999999976554432221000 00111111110 012234455555566
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA 163 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i 163 (251)
..++..+...+ ..+-|+-+|-|.|..++..++...|--+-+++
T Consensus 82 ~~~v~~l~~~g-~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDEG-KIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHhcC-CccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 66666554222 23457888999999999988888775555544
No 256
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=74.42 E-value=4.5 Score=34.87 Aligned_cols=46 Identities=15% Similarity=0.151 Sum_probs=34.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHh-c-C--CeeEEEEeCCCCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQ-A-G--ISCEFKAYPGLGHS 229 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~-~-~--~~~~~~~~~g~~H~ 229 (251)
...|.+++||..|.++|....-+-+-.+.+ . | .+..+++++++-|+
T Consensus 554 ~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 554 HGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 378999999999999999766544444433 2 2 46889999997774
No 257
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=70.28 E-value=63 Score=27.74 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=55.1
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc--CCCCcccchhcccch
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG--MADRTVLFEAGQAGP 208 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g--~~D~~~~~~~~~~~~ 208 (251)
+++++|++..-|.++.-.+..+...|. ..++.-.|..+........ .....+.-+.- +++..+..+..+...
T Consensus 117 v~pe~Ivit~Ga~~al~~l~~~l~~pG--D~Vlv~~P~Y~~~~~~~~~----~~G~~vv~v~~~~~~~~~~~~~~le~a~ 190 (496)
T PLN02376 117 FDPERVVMSGGATGANETIMFCLADPG--DVFLIPSPYYAAFDRDLRW----RTGVEIIPVPCSSSDNFKLTVDAADWAY 190 (496)
T ss_pred CChhhEEEccchHHHHHHHHHHhCCCC--CEEEECCCCccchHHHHHh----hCCCEEEEEeCCCCccCcCCHHHHHHHH
Confidence 678888887777777666655555553 4566666665544322111 11233333322 222233333322222
Q ss_pred HHHHhcCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 209 PFLEQAGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
+...+.+.+++.+++.+ .|..+..+..+.+++|..+
T Consensus 191 ~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~ 230 (496)
T PLN02376 191 KKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTR 230 (496)
T ss_pred HHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHH
Confidence 22222234556555653 1334567778888888864
No 258
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=68.92 E-value=4.9 Score=31.58 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=25.4
Q ss_pred CCCCCccEEEEEecCCCCCCCchh--hhhhhcCCCc
Q 025550 34 QNPMARNFILWLHGLGDSGPANEP--IKTLFTSPEF 67 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~ 67 (251)
++++.+|+++=+||+.+++.+|-. +++.+-..|.
T Consensus 104 n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 104 NPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 355788999999999999999866 5554444444
No 259
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=67.24 E-value=11 Score=28.45 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=22.5
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+.++.++.-.+.|-|.|+.++..++...+
T Consensus 23 e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 23 EAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 45665555689999999999998887644
No 260
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=65.43 E-value=55 Score=24.47 Aligned_cols=106 Identities=14% Similarity=0.207 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChh-----HHHHHHHHHhcCCCcceEE--EeccCCCCcchhhhhhccc
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQG-----GALTLASVLLYPRKLGGGA--IFSGWVPFNASLIDQFTSD 182 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~G-----g~~a~~~a~~~p~~~~~~i--~~~~~~~~~~~~~~~~~~~ 182 (251)
.|+...++.+++.+.. .+ ..+.++++||..- ++.++......- .+..+. .+-++ |..+.+.+.+...
T Consensus 118 ~DYe~~v~aik~~~pp---l~-k~e~~vlmgHGt~h~s~~~YacLd~~~~~~-~f~~v~v~~ve~y-P~~d~vi~~l~~~ 191 (265)
T COG4822 118 NDYEICVEAIKDQIPP---LN-KDEILVLMGHGTDHHSNAAYACLDHVLDEY-GFDNVFVAAVEGY-PLVDTVIEYLRKN 191 (265)
T ss_pred hhHHHHHHHHHHhcCC---cC-cCeEEEEEecCCCccHHHHHHHHHHHHHhc-CCCceEEEEecCC-CcHHHHHHHHHHc
Confidence 4455555555543331 11 2456889998544 333333333322 343332 23333 3333344444333
Q ss_pred C----CCCCEEEEccCCCCc-ccchhcccchHHHHhcCCeeEEE
Q 025550 183 A----KKTPILWSHGMADRT-VLFEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 183 ~----~~~p~l~~~g~~D~~-~~~~~~~~~~~~l~~~~~~~~~~ 221 (251)
. .-.|++++.|++-.. ...++...+.+.|.++|.+++..
T Consensus 192 ~~~~v~L~PlMlvAG~Ha~nDMasddedswk~il~~~G~~v~~~ 235 (265)
T COG4822 192 GIKEVHLIPLMLVAGDHAKNDMASDDEDSWKNILEKNGFKVEVY 235 (265)
T ss_pred CCceEEEeeeEEeechhhhhhhcccchHHHHHHHHhCCceeEEE
Confidence 2 336999998876321 11233457889999999988644
No 261
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=64.19 E-value=78 Score=25.77 Aligned_cols=132 Identities=14% Similarity=0.190 Sum_probs=67.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEe--ChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGF--SQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~--S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
..+.+.+..+.-+.+++.+.....-+-+|+.-|. |--........+...+.+.++|..--.+.+...+...+. ..+
T Consensus 20 g~e~L~~v~~~s~~i~~~l~~~~~~p~~vv~k~~~~t~~~i~~~~~~an~~~~c~gvi~wMhTfSpakmwI~gl~--~l~ 97 (359)
T PF02610_consen 20 GEETLKQVAEHSREIVDGLNASGSLPVKVVFKPVVTTPEEITRVCKEANADEDCDGVITWMHTFSPAKMWIPGLQ--RLQ 97 (359)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHS--SSEEEE---B-SHHHHHHHHHHHHH-TTEEEEEEEESS---THHHHHHHH--H--
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCceEEEecCccCCHHHHHHHHHHhhccCCccEEeehhhhhccHHHHHHHHH--HhC
Confidence 3455566666666666655433322345554433 333333333333344568999888777776666655443 478
Q ss_pred CCEEEEccCCCCcccchhc--------------ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 186 TPILWSHGMADRTVLFEAG--------------QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
.|++++|---+.-+|.+.. +++...+.+.|.+.+++ .||+-..+...+|.+|++..
T Consensus 98 kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~gi~~kvV----~G~w~D~~v~~~I~~W~rAA 167 (359)
T PF02610_consen 98 KPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMGIPRKVV----VGHWQDEEVWAEIGDWMRAA 167 (359)
T ss_dssp S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT--EEEE----ES-TT-HHHHHHHHHHHHHH
T ss_pred CCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhCCCcCeE----eeeCCCHHHHHHHHHHHHHH
Confidence 9999999888777775432 23444555666665444 37988888889999998754
No 262
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=63.42 E-value=26 Score=24.77 Aligned_cols=36 Identities=11% Similarity=-0.105 Sum_probs=20.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
..++|+++|-|..|..-+.++...++.+..++-.++
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 457899999999998888877766767777775544
No 263
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=60.77 E-value=48 Score=24.31 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=30.3
Q ss_pred CccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCC
Q 025550 38 ARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~ 79 (251)
..+.++++||.....-.... +.+.|.+.|..+..+.+|+.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 56789999997654443333 6778888999988889987643
No 264
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=60.03 E-value=26 Score=24.70 Aligned_cols=36 Identities=22% Similarity=0.457 Sum_probs=26.6
Q ss_pred ccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEc
Q 025550 39 RNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSF 74 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~ 74 (251)
++.+||+-|.++++..-.. +.+.|.+.|..++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4789999999998876333 55577789999999984
No 265
>PRK02399 hypothetical protein; Provisional
Probab=57.44 E-value=1.1e+02 Score=25.42 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=60.2
Q ss_pred EEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCccc--CC----CCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 43 LWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTC--NY----GAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 43 v~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~----g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
|++=|...++.. +..+.+.+.+.|..++.+|.-..+...... .. ......|-... ........+..+
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~------~~~dRg~ai~~M 79 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVF------CGGDRGSAMAAM 79 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhh------cCccHHHHHHHH
Confidence 445555555433 444666777789999999984322111010 00 00001111100 001123334555
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA 163 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i 163 (251)
.+.+..++..+.+.+ +.+-++-+|-|.|..++..++...|--+-+++
T Consensus 80 ~~ga~~~v~~L~~~g-~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 80 AEGAAAFVRELYERG-DVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHHHHHhcC-CccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 555566665444333 23468888999999999988887775554444
No 266
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.75 E-value=22 Score=26.68 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=19.8
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
+.+++. -.+.|-|.|+.++..++...
T Consensus 24 e~gi~~--~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 24 EMGLEP--SAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HcCCCc--eEEEEeCHHHHHHHHHHcCC
Confidence 345543 36999999999999888654
No 267
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=56.27 E-value=66 Score=25.23 Aligned_cols=87 Identities=13% Similarity=0.156 Sum_probs=47.4
Q ss_pred hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-Hc-CCCCCcE
Q 025550 59 KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AA-GIDPNNV 136 (251)
Q Consensus 59 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~-~~~~~~i 136 (251)
.+++.....+.+.+-|... ++|..+.. +.+...++...|.+.+.... .. .-..-|+
T Consensus 54 ~E~l~~GD~A~va~QYSyl-------------PSw~sfl~---------dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL 111 (289)
T PF10081_consen 54 LEYLYGGDVAIVAMQYSYL-------------PSWLSFLV---------DRDAAREAARALFEAVYARWSTLPEDRRPKL 111 (289)
T ss_pred HHHHhCCCeEEEEeccccc-------------cchHHHhc---------ccchHHHHHHHHHHHHHHHHHhCCcccCCeE
Confidence 3456666667777666533 34544322 33344444444444443322 22 1234689
Q ss_pred EEEEeChhHHHHHHHHHh---cCCCcceEEEecc
Q 025550 137 FVCGFSQGGALTLASVLL---YPRKLGGGAIFSG 167 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~---~p~~~~~~i~~~~ 167 (251)
.|.|-|+|+..+-..... .-+.+.+++..++
T Consensus 112 ~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~Gp 145 (289)
T PF10081_consen 112 YLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGP 145 (289)
T ss_pred EEeccCccccchhhhhccHHHhhhhcceEEEeCC
Confidence 999999998766543322 2235777776655
No 268
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=55.33 E-value=24 Score=27.99 Aligned_cols=25 Identities=28% Similarity=0.162 Sum_probs=19.5
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++.. -.++|.|+|+.++..++..
T Consensus 39 e~gi~~--d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 39 EAGIPV--DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HcCCCC--CEEEEECHHHHHHHHHHcC
Confidence 456543 4789999999999988865
No 269
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=55.23 E-value=17 Score=30.31 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=21.0
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+.++.++ ++.|.|.|+.++..++...+
T Consensus 97 E~gl~p~--vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 97 EANLLPR--IISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HcCCCCC--EEEEECHHHHHHHHHHcCCH
Confidence 4566543 79999999999998887544
No 270
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=54.92 E-value=24 Score=25.08 Aligned_cols=26 Identities=15% Similarity=0.003 Sum_probs=20.1
Q ss_pred cCCCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 129 AGIDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 129 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
.++. .-.+.|-|.|+.++..++...+
T Consensus 23 ~gi~--~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 23 RGPL--IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred cCCC--CCEEEEECHHHHHHHHHHcCCC
Confidence 4444 4579999999999998887644
No 271
>PRK10279 hypothetical protein; Provisional
Probab=53.73 E-value=26 Score=27.79 Aligned_cols=25 Identities=28% Similarity=0.254 Sum_probs=19.6
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++.. -.++|.|+|+.++..+|..
T Consensus 29 E~gi~~--d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 29 KVGIEI--DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HcCCCc--CEEEEEcHHHHHHHHHHcC
Confidence 456643 4899999999999888854
No 272
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=53.37 E-value=26 Score=25.36 Aligned_cols=26 Identities=35% Similarity=0.289 Sum_probs=19.8
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
+.++.. =.++|-|.||.++..++...
T Consensus 23 e~~~~~--d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 23 EAGILK--KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HcCCCc--ceEEEECHHHHHHHHHHcCC
Confidence 344443 48999999999999888754
No 273
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=52.36 E-value=71 Score=25.41 Aligned_cols=43 Identities=19% Similarity=0.040 Sum_probs=25.9
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHH
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKT 244 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~ 244 (251)
+..+.+.+.+++.+..........+-|... .+..+.+.+++..
T Consensus 166 ~~l~~~~~~l~~~~~~~~~l~v~~afHs~~m~~~~~~~~~~l~~ 209 (318)
T PF00698_consen 166 EALEALVERLKAEGIKAKRLPVSYAFHSPLMEPAADEFREALES 209 (318)
T ss_dssp HHHHHHHHHHHHTTSEEEEESSSSETTSGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhccceeEEEeeeeccccCchhhhhHHHHHhhhhc
Confidence 344568888888886666555555556543 3334555555554
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=51.29 E-value=59 Score=24.31 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=25.2
Q ss_pred CCCCCccEEEEEecCCCCCCCchh-hhhhhcCCCcceE
Q 025550 34 QNPMARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLT 70 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~ 70 (251)
|.+++..+|++.||...+...... +-..+.++||..+
T Consensus 133 pl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v 170 (265)
T COG4822 133 PLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNV 170 (265)
T ss_pred CcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCce
Confidence 456677899999997665544333 4447778888443
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=50.52 E-value=33 Score=24.42 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=17.0
Q ss_pred EEEEEeChhHHHHHHHHHhc
Q 025550 136 VFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~ 155 (251)
-.++|-|.|+.++..++...
T Consensus 30 d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 30 DIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eEEEEECHHHHHHHHHHcCC
Confidence 37999999999999888654
No 276
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=50.25 E-value=1.7e+02 Score=28.67 Aligned_cols=57 Identities=18% Similarity=0.010 Sum_probs=30.4
Q ss_pred EEccCCCCcc---cchhcccchHHHHhcCCeeEEEEeCCC-CCCCCHHH-HHHHHHHHHHhh
Q 025550 190 WSHGMADRTV---LFEAGQAGPPFLEQAGISCEFKAYPGL-GHSISNEE-LRNLESWIKTRM 246 (251)
Q Consensus 190 ~~~g~~D~~~---~~~~~~~~~~~l~~~~~~~~~~~~~g~-~H~~~~~~-~~~~~~~l~~~l 246 (251)
..|-.+|..+ |.+....+.+.|++.|+-.+-+---|. -|....+. .+.+.+-+++.+
T Consensus 650 aCHNs~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i 711 (2376)
T KOG1202|consen 650 ACHNSKDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVI 711 (2376)
T ss_pred cccCCCCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccCHHHHhhChHHHHHHHHhc
Confidence 4667777643 235567888999998776553322221 24433322 234444444444
No 277
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=50.11 E-value=33 Score=26.73 Aligned_cols=25 Identities=24% Similarity=0.046 Sum_probs=19.4
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++.. =.+.|.|+|+.++..+|..
T Consensus 34 E~gi~~--d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 34 EAGIPI--DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HcCCCc--cEEEEECHHHHHHHHHHcC
Confidence 455543 3799999999999988865
No 278
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=49.81 E-value=72 Score=23.88 Aligned_cols=39 Identities=5% Similarity=0.112 Sum_probs=29.0
Q ss_pred CCccEEEEEecCCCCCCC--chh-hhhhhcCCCcceEEEEcc
Q 025550 37 MARNFILWLHGLGDSGPA--NEP-IKTLFTSPEFKLTKWSFP 75 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~-~~~~~~~~g~~~~~~~~~ 75 (251)
.+.+.|.|++-.+.+... |.. ..+.|+..|..+..+...
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 447899999998877766 444 455888899988777654
No 279
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=48.71 E-value=22 Score=25.04 Aligned_cols=39 Identities=13% Similarity=0.272 Sum_probs=21.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHH
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGA 146 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~ 146 (251)
....+...+..+...+.........+++|.|+|+|++..
T Consensus 78 ~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 78 SADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 345555555444444443323345688999999999987
No 280
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=47.68 E-value=31 Score=25.89 Aligned_cols=62 Identities=21% Similarity=0.351 Sum_probs=30.9
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhcCCe---eEEEEeCCCCCCC-------CHHHHHHHHHHHHHhhcC
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS---CEFKAYPGLGHSI-------SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~~H~~-------~~~~~~~~~~~l~~~l~~ 248 (251)
+.||+++||..+.. ...-..+.+.|++.|.. +--..|-+..... ..+...++.+|+.+.++.
T Consensus 1 ~~PVVlVHG~~~~~--~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~ 72 (219)
T PF01674_consen 1 NRPVVLVHGTGGNA--YSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY 72 (219)
T ss_dssp S--EEEE--TTTTT--CGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcch--hhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh
Confidence 46999999999733 22333678889998854 2222232212111 123356788888887753
No 281
>PRK13690 hypothetical protein; Provisional
Probab=47.68 E-value=52 Score=23.64 Aligned_cols=27 Identities=22% Similarity=0.576 Sum_probs=18.8
Q ss_pred HHHHHHHHHHH-HcCCCCCcEEEEEeCh
Q 025550 117 RNVHAMIDKEV-AAGIDPNNVFVCGFSQ 143 (251)
Q Consensus 117 ~~l~~~i~~~~-~~~~~~~~i~l~G~S~ 143 (251)
+++...+.+++ +.++....+.++|.|.
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 34444444444 6778889999999996
No 282
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=47.32 E-value=88 Score=23.11 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=24.1
Q ss_pred ccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCC
Q 025550 39 RNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSA 77 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~ 77 (251)
...|+++||....--.+. ...+.|.+.+..+-...|++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~ 196 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGG 196 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCC
Confidence 456999999765543332 256688888887777777743
No 283
>PRK02929 L-arabinose isomerase; Provisional
Probab=47.13 E-value=1.9e+02 Score=25.01 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=56.0
Q ss_pred CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc---CC------C-Ccccch----hcccchHHHHhcCCeeEEE
Q 025550 156 PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG---MA------D-RTVLFE----AGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 156 p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g---~~------D-~~~~~~----~~~~~~~~l~~~~~~~~~~ 221 (251)
.+.+.+++.....+.....+.... ...++|+++++- .+ | ...... ....+...+++.|++.+++
T Consensus 70 ~~~~dgvi~~m~TFs~a~~~i~~~--~~l~~PvL~~~~Q~~~e~p~~~id~d~m~lnqs~~G~~e~~~il~R~gi~~~~v 147 (499)
T PRK02929 70 DDNCAGVITWMHTFSPAKMWIRGL--SALQKPLLHLHTQFNAEIPWDTIDMDFMNLNQSAHGDREFGFIGARLRKQRKVV 147 (499)
T ss_pred cCCCcEEEEccCCCchHHHHHHHH--HHcCCCEEEEecCCCccCCCCCCCcchhhhhhcccChHHHHHHHHHcCCCeeEE
Confidence 456899998888777666555543 457899999887 33 1 111222 1235566778888887666
Q ss_pred EeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 222 AYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 222 ~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
. ||.-..+..+++.+|++-.
T Consensus 148 ~----G~~~d~~v~~~i~~w~raa 167 (499)
T PRK02929 148 V----GHWQDPEVQERIGAWMRVA 167 (499)
T ss_pred E----EeCCCHHHHHHHHHHHHHH
Confidence 4 7887777788888888643
No 284
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=46.92 E-value=38 Score=25.82 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHhcC
Q 025550 137 FVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~p 156 (251)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999998887653
No 285
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.38 E-value=18 Score=28.82 Aligned_cols=19 Identities=37% Similarity=0.501 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhc
Q 025550 137 FVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~ 155 (251)
.+.|.|.||.++..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6999999999999988643
No 286
>PRK12467 peptide synthase; Provisional
Probab=45.08 E-value=1.1e+02 Score=34.08 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=51.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.++..|...++...+..+...+. .+..++.+..+.. ....| ....+.....
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~-----------~~d~~--------------~~~~~~~~~~ 3744 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHL-----------LDDGW--------------QDTSLQAMAV 3744 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhC-CCCcEEEEecccc-----------ccccC--------------CccchHHHHH
Confidence 44679999998888777777776664 3456666655422 11122 1112222233
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
...+.+... ....+..+.|+|+||.++..++..
T Consensus 3745 ~y~~~~~~~----~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3745 QYADYILWQ----QAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred HHHHHHHHh----ccCCCeeeeeeecchHHHHHHHHH
Confidence 333333221 133468899999999999887754
No 287
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=44.33 E-value=41 Score=26.93 Aligned_cols=64 Identities=11% Similarity=0.154 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHH--HcCCCCCcEEEEEeChhHHHHHHHHHhcCC---------CcceEEEeccCCCCcc
Q 025550 110 SSLLKAVRNVHAMIDKEV--AAGIDPNNVFVCGFSQGGALTLASVLLYPR---------KLGGGAIFSGWVPFNA 173 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---------~~~~~i~~~~~~~~~~ 173 (251)
.+..++..++.++++... .......+..|+.-|+||-++..++...-+ .+.++++-.+|+.+.+
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 345555666666666554 334466789999999999999888765322 2567776667766443
No 288
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=43.02 E-value=2.1e+02 Score=24.26 Aligned_cols=109 Identities=16% Similarity=0.124 Sum_probs=52.2
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc-cCCCCc-ccchhcccc
Q 025550 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH-GMADRT-VLFEAGQAG 207 (251)
Q Consensus 130 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~~D~~-~~~~~~~~~ 207 (251)
.+++++|++..-+..+.-.+..+...|. .+++.-.|..+........ .....+.-+. .+.|.. ...+..++.
T Consensus 117 ~v~p~~Ivit~G~t~al~~l~~~l~~pG--D~Vlv~~P~Y~~f~~~~~~----~~g~~vv~v~~~~~~~f~~~~~~le~a 190 (447)
T PLN02607 117 RFDPDRIVLTAGATAANELLTFILADPG--DALLVPTPYYPGFDRDLRW----RTGVKIVPIHCDSSNNFQVTPQALEAA 190 (447)
T ss_pred CcCHHHeEEcCChHHHHHHHHHHhCCCC--CEEEEcCCCCcchHHHHHh----cCCcEEEEEeCCCCCCCcCCHHHHHHH
Confidence 3677788875544444433333333443 5666666655433321110 1122222222 222322 233332223
Q ss_pred hHHHHhcCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 208 PPFLEQAGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
.+..++.|.+++.+.+.+ .|..+..+..+++++|..+
T Consensus 191 ~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~ 231 (447)
T PLN02607 191 YQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVR 231 (447)
T ss_pred HHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 333333456667666654 1334557778888888765
No 289
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=42.71 E-value=6 Score=13.71 Aligned_cols=6 Identities=83% Similarity=1.520 Sum_probs=2.6
Q ss_pred EeChhH
Q 025550 140 GFSQGG 145 (251)
Q Consensus 140 G~S~Gg 145 (251)
|+++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344444
No 290
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=42.42 E-value=61 Score=28.39 Aligned_cols=62 Identities=10% Similarity=0.099 Sum_probs=47.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC------H---HHHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS------N---EELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~------~---~~~~~~~~~l~~~l~ 247 (251)
.-.|+.++.-.-|+.. +++.-++++|+..|.++.+.++++..|+|- . +..+.-++-|+..|.
T Consensus 786 qLPp~~i~ac~mDP~L--DD~vmfA~kLr~lG~~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~ 856 (880)
T KOG4388|consen 786 QLPPVHIVACAMDPML--DDSVMFARKLRNLGQPVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLT 856 (880)
T ss_pred cCCCceEEEeccCcch--hHHHHHHHHHHhcCCceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhC
Confidence 3468888888888874 466789999999999999999999999874 2 224555666666665
No 291
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.53 E-value=16 Score=28.19 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=14.5
Q ss_pred CCCcEEEEEeChhHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTL 149 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~ 149 (251)
+.+.|.++|||+|..=-.
T Consensus 233 ~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred CCCEEEEEeCCCchhhHH
Confidence 567999999999976444
No 292
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=41.06 E-value=26 Score=23.35 Aligned_cols=16 Identities=13% Similarity=0.079 Sum_probs=12.1
Q ss_pred CCCccEEEEEecCCCC
Q 025550 36 PMARNFILWLHGLGDS 51 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~ 51 (251)
-.+..++|++||.-.+
T Consensus 53 ~~~~klaIfVDGcfWH 68 (117)
T TIGR00632 53 FDEYRCVIFIHGCFWH 68 (117)
T ss_pred ecCCCEEEEEcccccc
Confidence 3577899999997533
No 293
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=40.91 E-value=53 Score=25.16 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=16.6
Q ss_pred EEEeChhHHHHHHHHHhcC
Q 025550 138 VCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 138 l~G~S~Gg~~a~~~a~~~p 156 (251)
+.|-|+|+.++..++...+
T Consensus 34 i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 34 ISGASAGALAACCLLCDLP 52 (245)
T ss_pred EEEEcHHHHHHHHHHhCCc
Confidence 9999999999998887644
No 294
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=40.48 E-value=86 Score=19.12 Aligned_cols=24 Identities=29% Similarity=0.411 Sum_probs=18.1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
.++++.++|-|.|=.+|..+++..
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 468999999999988887777664
No 295
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=40.38 E-value=35 Score=26.47 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=31.9
Q ss_pred CCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccC
Q 025550 37 MARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPS 76 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~ 76 (251)
...|+||++.|..+++.. .+.+...+..+|+.+.++.-|.
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt 94 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS 94 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC
Confidence 356999999998877655 4557888999999999887664
No 296
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.25 E-value=56 Score=25.21 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=17.4
Q ss_pred EEEEeChhHHHHHHHHHhcC
Q 025550 137 FVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~p 156 (251)
.++|.|.|+.++..++...+
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred EEEEECHHHHhHHHHHhCCc
Confidence 79999999999998887654
No 297
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=39.89 E-value=94 Score=24.28 Aligned_cols=24 Identities=21% Similarity=0.099 Sum_probs=18.1
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..++. +-+++|||+|-+.|+.++.
T Consensus 78 ~~Gi~--p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 78 SWGVR--PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HcCCc--ccEEEecCHHHHHHHHHhC
Confidence 45554 4589999999988876653
No 298
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=39.76 E-value=30 Score=24.70 Aligned_cols=22 Identities=14% Similarity=-0.069 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHhcC
Q 025550 135 NVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
-=.+.|.|.|+.++..++...+
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCC
Confidence 3479999999999998887643
No 299
>PLN02231 alanine transaminase
Probab=39.48 E-value=2.6e+02 Score=24.40 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=50.2
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc-CCCCcccchhcccchH
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG-MADRTVLFEAGQAGPP 209 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g-~~D~~~~~~~~~~~~~ 209 (251)
+++++|++..-+.+|...+..+...+ .=..++...|..+........... .++.+-.. +++..++.+ .+.+
T Consensus 189 ~~pe~I~iT~Ga~~ai~~~~~~l~~~-~gd~Vli~~P~Y~~y~~~~~~~g~----~~v~~~l~~~~~~~~d~~---~Le~ 260 (534)
T PLN02231 189 ADPNDIFLTDGASPAVHMMMQLLIRS-EKDGILCPIPQYPLYSASIALHGG----TLVPYYLDEATGWGLEIS---ELKK 260 (534)
T ss_pred CCcccEEEeCCHHHHHHHHHHHhccC-CCCEEEEeCCCChhHHHHHHHcCC----EEEEEecCcccCCCCCHH---HHHH
Confidence 56777876544444443333333222 124567667766544433332221 12222112 122234444 3444
Q ss_pred HHHh---cCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 210 FLEQ---AGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 210 ~l~~---~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
.++. .+.+.+.+++.+ .|..+..+..+++.+|..+
T Consensus 261 ~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 261 QLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred HHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 4433 222344444432 2456678888889888776
No 300
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=39.12 E-value=45 Score=27.58 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=22.4
Q ss_pred HHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 124 DKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 124 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+.+.+.++.++ +|.|-|.|+.++..++...+
T Consensus 103 kaL~e~gl~p~--~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 103 KALWLRGLLPR--IITGTATGALIAALVGVHTD 133 (391)
T ss_pred HHHHHcCCCCc--eEEEecHHHHHHHHHHcCCH
Confidence 33335666543 69999999999999887543
No 301
>PF03852 Vsr: DNA mismatch endonuclease Vsr; InterPro: IPR004603 This entry represents VSR (very short patch repair) endonucleases, which occur in a variety of bacteria. VSR recognises a TG mismatched base pair, generated after spontaneous deamination of methylated cytosines, and cleaves the phosphate backbone on the 5' side of the thymine []. GT mismatches can lead to C-to-T transition mutations if not repaired. VSR repairs the mismatches in favour of the G-containing strand. In Escherichia coli, this endonuclease nicks double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the thymidine residue, which is mismatched to 2'-deoxyguanosine []. The incision is mismatch-dependent and strand specific. The structure of VSR is similar to the core structure of restriction endonucleases, which have a 3-layer alpha/beta/alpha topology []. ; GO: 0004519 endonuclease activity, 0006298 mismatch repair; PDB: 1ODG_A 1VSR_A 1CW0_A.
Probab=38.98 E-value=33 Score=20.73 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=14.2
Q ss_pred CCccEEEEEecCCCCCCCch
Q 025550 37 MARNFILWLHGLGDSGPANE 56 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~ 56 (251)
.++.++||+||.-.++.++.
T Consensus 54 ~~~k~aIFVdGCFWHgh~c~ 73 (75)
T PF03852_consen 54 PKYKIAIFVDGCFWHGHDCP 73 (75)
T ss_dssp GGGTEEEEEE-TTTTT-SST
T ss_pred CCCCEEEEEecceeCCCCCC
Confidence 56789999999888776543
No 302
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=38.97 E-value=72 Score=25.11 Aligned_cols=34 Identities=12% Similarity=0.250 Sum_probs=25.9
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA 77 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 77 (251)
..-|.|+|.-|.++ ..+.++..||.++.+|.--.
T Consensus 250 ~~vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvd 283 (359)
T KOG2872|consen 250 APVPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVD 283 (359)
T ss_pred CCCceEEEEcCcch-------HHHHHHhcCCcEEeeccccc
Confidence 45699999999654 44567789999999997543
No 303
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=38.90 E-value=1.2e+02 Score=23.18 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=26.8
Q ss_pred hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccC
Q 025550 58 IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHE 98 (251)
Q Consensus 58 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~ 98 (251)
.++.|.+.|..+..+|.-+.++.|.+... ..||....
T Consensus 62 mve~L~~~GvdV~ifddtg~~~TPDsvFP----NNWFSTh~ 98 (318)
T COG4874 62 MVEGLRQAGVDVVIFDDTGQGETPDSVFP----NNWFSTHE 98 (318)
T ss_pred HHHHHHhcCceEEEeecCCCCCCCcccCC----CcccccCc
Confidence 55578889999999999877776655433 46776544
No 304
>PRK06207 aspartate aminotransferase; Provisional
Probab=38.67 E-value=2.3e+02 Score=23.50 Aligned_cols=18 Identities=22% Similarity=0.368 Sum_probs=12.9
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 025550 227 GHSISNEELRNLESWIKT 244 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l~~ 244 (251)
|+.+..+..+++.++..+
T Consensus 192 G~~~s~e~l~~l~~~a~~ 209 (405)
T PRK06207 192 GVVYSAEEIAQIAALARR 209 (405)
T ss_pred CcCCCHHHHHHHHHHHHH
Confidence 445667778888888765
No 305
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=38.35 E-value=1.5e+02 Score=26.43 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=30.9
Q ss_pred CCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCC
Q 025550 37 MARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 79 (251)
+-+..++++||.....-. -..+.+.|...|..+-.+.+|+.+.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H 594 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGH 594 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCc
Confidence 344569999997654333 3347778888999999999996543
No 306
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=38.30 E-value=87 Score=25.02 Aligned_cols=22 Identities=32% Similarity=0.283 Sum_probs=17.6
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+.++.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4567799999999888886654
No 307
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=37.73 E-value=70 Score=22.34 Aligned_cols=19 Identities=16% Similarity=0.197 Sum_probs=16.1
Q ss_pred CcEEEEEeChhHHHHHHHH
Q 025550 134 NNVFVCGFSQGGALTLASV 152 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a 152 (251)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457899999999999887
No 308
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=37.62 E-value=57 Score=25.57 Aligned_cols=24 Identities=21% Similarity=0.047 Sum_probs=18.3
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..++ ++..++|||+|=..++.++.
T Consensus 72 ~~g~--~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 72 ALLP--RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred hcCC--CCcEEeecCHHHHHHHHHhC
Confidence 4455 56789999999988876653
No 309
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.44 E-value=33 Score=25.55 Aligned_cols=21 Identities=19% Similarity=0.004 Sum_probs=18.3
Q ss_pred EEEEEeChhHHHHHHHHHhcC
Q 025550 136 VFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~p 156 (251)
-.+.|.|.|+.++..++...+
T Consensus 28 d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 28 DIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CEEEEECHHHHHHHHHHcCCc
Confidence 379999999999999988764
No 310
>cd00578 L-fuc_L-ara-isomerases L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=37.29 E-value=1.8e+02 Score=24.58 Aligned_cols=80 Identities=19% Similarity=0.210 Sum_probs=46.8
Q ss_pred CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc--------ccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 158 KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT--------VLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+.++|...+.+.....+.... ...+.|+++++-..... -..-....+...+++.|.+.+++. ||.
T Consensus 63 ~~d~ii~~~~tf~~~~~~~~~~--~~~~~Pvll~a~~~~~~~~~~~~~~~s~~g~~~~~~~l~r~gi~~~~v~----g~~ 136 (452)
T cd00578 63 NCDGLIVWMHTFGPAKMWIAGL--SELRKPVLLLATQFNREIPDFMNLNQSACGLREFGNILARLGIPFKVVY----GHW 136 (452)
T ss_pred CCcEEEEcccccccHHHHHHHH--HhcCCCEEEEeCCCCCCCCchhhhhcchhhhHHHHHHHHHcCCceeEEE----CCC
Confidence 5777777766665554444433 23568887766433211 111123456677888888876552 566
Q ss_pred CCHHHHHHHHHHHH
Q 025550 230 ISNEELRNLESWIK 243 (251)
Q Consensus 230 ~~~~~~~~~~~~l~ 243 (251)
...+..+++.+|++
T Consensus 137 ~d~~~~~~i~~~~r 150 (452)
T cd00578 137 KDEDVLRKIESWAR 150 (452)
T ss_pred CCHHHHHHHHHHHH
Confidence 55556677777775
No 311
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.26 E-value=46 Score=27.70 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=21.7
Q ss_pred HHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 124 DKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 124 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+.+.+.++.+ -++.|.|.|+.++..++...+
T Consensus 87 kaL~e~gllp--~iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 87 KALLDADLLP--NVISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred HHHHhCCCCC--CEEEEECHHHHHHHHHHcCCH
Confidence 3333455543 369999999999998887543
No 312
>PRK11460 putative hydrolase; Provisional
Probab=37.21 E-value=1.8e+02 Score=21.87 Aligned_cols=40 Identities=15% Similarity=-0.041 Sum_probs=25.2
Q ss_pred CccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCC
Q 025550 38 ARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSA 77 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~ 77 (251)
..+.|+++||.....-.+.. +.+.+.+.|..+-...+++.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~ 189 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDL 189 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 34568899997655433333 55577777776655666754
No 313
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=37.12 E-value=59 Score=25.79 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=20.0
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
+.++. .-+|.|.|+|+.++..+|...
T Consensus 35 e~gi~--~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 35 EAGIP--IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HcCCC--ccEEEecCHHHHHHHHHHcCC
Confidence 44543 458999999999999888753
No 314
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.79 E-value=24 Score=24.98 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=23.8
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 134 NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
+.+.++.+|||-.+|-.+....+ ++..+++.|
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNG 88 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAING 88 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecC
Confidence 35778999999999988776654 555566665
No 315
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=35.82 E-value=59 Score=25.77 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=19.5
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
+.++.+ -.+.|.|.|+.++..++...
T Consensus 93 e~~l~~--~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 93 EQDLLP--RVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HcCCCC--CEEEEEcHHHHHHHHHHcCC
Confidence 445544 36999999999999888643
No 316
>COG1647 Esterase/lipase [General function prediction only]
Probab=35.68 E-value=66 Score=24.33 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=33.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~ 234 (251)
.+.-+|++||--=. +...+.+.+.|++.|..+..=.|| ||+...+.
T Consensus 14 G~~AVLllHGFTGt---~~Dvr~Lgr~L~e~GyTv~aP~yp--GHG~~~e~ 59 (243)
T COG1647 14 GNRAVLLLHGFTGT---PRDVRMLGRYLNENGYTVYAPRYP--GHGTLPED 59 (243)
T ss_pred CCEEEEEEeccCCC---cHHHHHHHHHHHHCCceEecCCCC--CCCCCHHH
Confidence 34678899985432 456778999999999888877788 47665443
No 317
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=35.15 E-value=1.5e+02 Score=20.54 Aligned_cols=55 Identities=15% Similarity=0.235 Sum_probs=35.5
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
...|++-+...-|..-..++.+...+.|+.+|++--|.+- ....+.++++.+||+
T Consensus 88 f~~pvIGVITK~Dl~~~~~~i~~a~~~L~~aG~~~if~vS-----~~~~eGi~eL~~~L~ 142 (143)
T PF10662_consen 88 FNKPVIGVITKIDLPSDDANIERAKKWLKNAGVKEIFEVS-----AVTGEGIEELKDYLE 142 (143)
T ss_pred cCCCEEEEEECccCccchhhHHHHHHHHHHcCCCCeEEEE-----CCCCcCHHHHHHHHh
Confidence 5688988888888654456666777888888876322221 123455667777665
No 318
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=34.94 E-value=2.7e+02 Score=23.17 Aligned_cols=105 Identities=15% Similarity=0.114 Sum_probs=53.8
Q ss_pred CCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc-cC-CCCcccchhcccc
Q 025550 131 IDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH-GM-ADRTVLFEAGQAG 207 (251)
Q Consensus 131 ~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~-~D~~~~~~~~~~~ 207 (251)
+++++ |++..-+..|......+...|. .-++...|..+.......... ..|+.+-. .+ +|.....+ .+
T Consensus 86 ~~~~~eiivt~Ga~~al~~~~~a~~~pG--DeVlip~P~Y~~y~~~~~~~g----g~~v~v~l~~~~~~f~~d~~---~l 156 (393)
T COG0436 86 VDPEEEIIVTAGAKEALFLAFLALLNPG--DEVLIPDPGYPSYEAAVKLAG----GKPVPVPLDEEENGFKPDLE---DL 156 (393)
T ss_pred CCCCCeEEEeCCHHHHHHHHHHHhcCCC--CEEEEeCCCCcCHHHHHHhcC----CEEEEEeCCcCccCCcCCHH---HH
Confidence 45555 8887777777776666666663 237777777765554433322 12333321 12 23333333 23
Q ss_pred hHHHHhcCCeeEEEEeCC--CCCCCCHHHHHHHHHHHHHh
Q 025550 208 PPFLEQAGISCEFKAYPG--LGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~~l~~~ 245 (251)
.+.+.. ..+.-++.+|+ .|-.+..+.++.+.++..++
T Consensus 157 ~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~ 195 (393)
T COG0436 157 EAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREH 195 (393)
T ss_pred HhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc
Confidence 333333 22333333343 13345577788888877663
No 319
>PLN02672 methionine S-methyltransferase
Probab=34.91 E-value=2.9e+02 Score=26.67 Aligned_cols=19 Identities=26% Similarity=0.225 Sum_probs=12.6
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 025550 226 LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 226 ~~H~~~~~~~~~~~~~l~~ 244 (251)
.|+.+..++.+++.++..+
T Consensus 842 TG~v~S~eeLe~Llela~k 860 (1082)
T PLN02672 842 TGLLYSNSEIEEILSVCAK 860 (1082)
T ss_pred cCccCCHHHHHHHHHHHHH
Confidence 3555667777777777654
No 320
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=34.56 E-value=66 Score=22.90 Aligned_cols=17 Identities=35% Similarity=0.716 Sum_probs=9.9
Q ss_pred HcCCCCCcEEEEEeChh
Q 025550 128 AAGIDPNNVFVCGFSQG 144 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~G 144 (251)
+..+.+..+.++|.|--
T Consensus 13 ~a~l~~g~i~VvGcSTS 29 (172)
T PF04260_consen 13 QANLKPGQIFVVGCSTS 29 (172)
T ss_dssp HS---TT-EEEEEE-HH
T ss_pred hcCCCCCCEEEEeeeHH
Confidence 66778889999999963
No 321
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=33.26 E-value=65 Score=25.84 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=19.2
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++.+ -.+.|-|.|+.++..++..
T Consensus 92 e~gl~p--~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 92 EHQLLP--RVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HcCCCC--CEEEEECHHHHHHHHHHcC
Confidence 456644 3699999999999988764
No 322
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.08 E-value=1.7e+02 Score=22.20 Aligned_cols=24 Identities=29% Similarity=0.585 Sum_probs=17.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
.++.|.|.|+|.|| +...++...-
T Consensus 6 ~~k~VlItgcs~GG-IG~ala~ef~ 29 (289)
T KOG1209|consen 6 QPKKVLITGCSSGG-IGYALAKEFA 29 (289)
T ss_pred CCCeEEEeecCCcc-hhHHHHHHHH
Confidence 35689999999999 5555665543
No 323
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=32.73 E-value=44 Score=23.65 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=16.2
Q ss_pred cEEEEEeChhHHHHHHHHHh
Q 025550 135 NVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~ 154 (251)
--.+.|-|.||.++..++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 34799999999999877765
No 324
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=32.47 E-value=1.3e+02 Score=24.23 Aligned_cols=51 Identities=27% Similarity=0.363 Sum_probs=35.6
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhcCCeeE-EEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE-FKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..+++.++|-.+ -+.|.+.+++.|..+. ...|++ -|.+....++.+.+..+
T Consensus 227 ~~~v~a~sGIg~-------P~~F~~~L~~~G~~~~~~~~f~D-Hh~yt~~dl~~l~~~a~ 278 (326)
T PF02606_consen 227 GKPVLAFSGIGN-------PERFFDTLESLGIEVVGTLAFPD-HHRYTEQDLEKLEAEAK 278 (326)
T ss_pred CCeeEEEEEcCC-------hHHHHHHHHHcCCeEEEeeECCC-CCCCCHHHHHHHHHhhc
Confidence 345555555444 2368899999998855 888997 77888888877776543
No 325
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.15 E-value=42 Score=27.19 Aligned_cols=18 Identities=33% Similarity=0.405 Sum_probs=16.0
Q ss_pred EEEEeChhHHHHHHHHHh
Q 025550 137 FVCGFSQGGALTLASVLL 154 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~ 154 (251)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 699999999999988863
No 326
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=31.97 E-value=81 Score=24.49 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=40.5
Q ss_pred CCCcEEEEEeChh-----HHHHHHHHHhcCCCc-ceEEEeccCCCCcchhhhhhcccC----CCCCEEEEccCC---CCc
Q 025550 132 DPNNVFVCGFSQG-----GALTLASVLLYPRKL-GGGAIFSGWVPFNASLIDQFTSDA----KKTPILWSHGMA---DRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~G-----g~~a~~~a~~~p~~~-~~~i~~~~~~~~~~~~~~~~~~~~----~~~p~l~~~g~~---D~~ 198 (251)
..+.++++||-.- .+.++...++.-..- --+-.+.|+.. ...+...+.... .-.|++++.|++ |-.
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtvEG~P~-~~~vi~~L~~~g~k~V~L~PlMlVAGdHa~nDma 218 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTVEGYPS-LEDVIARLKKKGIKKVHLIPLMLVAGDHAKNDMA 218 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEETTSSSB-HHHHHHHHHHHT-SEEEEEEESSS--HHHHCCCC
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEeCCCCC-HHHHHHHHHhcCCCeEEEEecccccchhhhhhhc
Confidence 4567889999543 333333333332111 12233344333 233333333322 335888877754 543
Q ss_pred ccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 199 VLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
-+ .-+.+...|++.|..++.. ..|
T Consensus 219 Gd--e~dSWks~L~~~G~~v~~~-l~G 242 (262)
T PF06180_consen 219 GD--EEDSWKSRLEAAGFEVTCV-LKG 242 (262)
T ss_dssp SS--STTSHHHHHHHTT-EEEE-----
T ss_pred CC--CcchHHHHHHHCCCEEEEE-ecc
Confidence 22 2346899999999887653 444
No 327
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=31.79 E-value=59 Score=24.65 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=31.3
Q ss_pred CCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccC
Q 025550 37 MARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPS 76 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~ 76 (251)
.+.|+||++.|+.+.+.. -..+...+..+|+.+.++.-|.
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt 69 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS 69 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC
Confidence 346999999998877655 4457778999999999877653
No 328
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.12 E-value=1.8e+02 Score=23.59 Aligned_cols=35 Identities=9% Similarity=0.208 Sum_probs=28.5
Q ss_pred CCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEE
Q 025550 37 MARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTK 71 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~ 71 (251)
.++|.|+++=|.++.+.. ...++.++.++|+.++.
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vll 172 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLL 172 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEE
Confidence 567999999998888765 34488899999998885
No 329
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=31.04 E-value=42 Score=22.80 Aligned_cols=16 Identities=19% Similarity=0.279 Sum_probs=12.8
Q ss_pred CCccEEEEEecCCCCC
Q 025550 37 MARNFILWLHGLGDSG 52 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~ 52 (251)
+++.++||+||.-.++
T Consensus 55 ~~y~~viFvHGCFWh~ 70 (150)
T COG3727 55 PKYRCVIFVHGCFWHG 70 (150)
T ss_pred cCceEEEEEeeeeccC
Confidence 5788999999976544
No 330
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.74 E-value=45 Score=26.15 Aligned_cols=19 Identities=32% Similarity=0.494 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhc
Q 025550 137 FVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~ 155 (251)
.++|.|.||.++..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7999999999999988653
No 331
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=30.64 E-value=41 Score=26.63 Aligned_cols=17 Identities=35% Similarity=0.763 Sum_probs=15.4
Q ss_pred EEEEeChhHHHHHHHHH
Q 025550 137 FVCGFSQGGALTLASVL 153 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~ 153 (251)
.++|-|.||.+|..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 69999999999998875
No 332
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=30.24 E-value=57 Score=27.16 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=36.2
Q ss_pred cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-------HHHHHHHHHHHHH
Q 025550 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-------NEELRNLESWIKT 244 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 244 (251)
...+.|+++++|.-|.+-. +....+.+.+...|.-+=.+..||.|+... ......+++||..
T Consensus 186 ~~~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 186 GEKPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp SSS-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 3467899999999998633 222233345667788877888999987532 1236777888765
No 333
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=30.10 E-value=1.3e+02 Score=25.19 Aligned_cols=41 Identities=15% Similarity=0.044 Sum_probs=25.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
....+++++|++|+... .-+...+. ..+....+.||++|..
T Consensus 350 ~~~rmlFVYG~nDPW~A-----~~f~l~~g-~~ds~v~~~PggnHga 390 (448)
T PF05576_consen 350 NGPRMLFVYGENDPWSA-----EPFRLGKG-KRDSYVFTAPGGNHGA 390 (448)
T ss_pred CCCeEEEEeCCCCCccc-----CccccCCC-CcceEEEEcCCCcccc
Confidence 56789999999997633 11222221 1235566679999974
No 334
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.73 E-value=86 Score=25.31 Aligned_cols=18 Identities=22% Similarity=0.128 Sum_probs=14.4
Q ss_pred EEEEEeChhHHHHHHHHH
Q 025550 136 VFVCGFSQGGALTLASVL 153 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~ 153 (251)
-+++|||+|=+.++.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988876663
No 335
>PRK06490 glutamine amidotransferase; Provisional
Probab=29.22 E-value=2.6e+02 Score=21.31 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=21.2
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEE
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWS 73 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~ 73 (251)
.+..++|+.|-..+.... +.+.+.+.|..+..++
T Consensus 6 ~~~~vlvi~h~~~~~~g~---l~~~l~~~g~~~~v~~ 39 (239)
T PRK06490 6 DKRPVLIVLHQERSTPGR---VGQLLQERGYPLDIRR 39 (239)
T ss_pred CCceEEEEecCCCCCChH---HHHHHHHCCCceEEEe
Confidence 456788888875544333 5556667777665554
No 336
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=28.99 E-value=84 Score=22.38 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=13.9
Q ss_pred HcCCCCCcEEEEEeCh
Q 025550 128 AAGIDPNNVFVCGFSQ 143 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~ 143 (251)
+.++....+.++|.|.
T Consensus 13 ~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 13 ASNLKKGDLFVIGCST 28 (172)
T ss_pred hhCCCCCCEEEEecch
Confidence 6678889999999996
No 337
>PRK13938 phosphoheptose isomerase; Provisional
Probab=28.34 E-value=2.3e+02 Score=20.84 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=21.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
..++|.++|..-.|.++..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5689999999999999999987753
No 338
>cd07363 45_DOPA_Dioxygenase The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated ca
Probab=28.19 E-value=2.8e+02 Score=21.33 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=17.4
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+.+++....--.|..-|..+.+.++.
T Consensus 92 ~~gi~~~~~~~~~lDHG~~vPL~~~~ 117 (253)
T cd07363 92 AAGIPARLDPERGLDHGAWVPLKLMY 117 (253)
T ss_pred hcCCCccccCCcCCcccHHHHHHHHc
Confidence 55665443334677889888887764
No 339
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=27.45 E-value=21 Score=27.77 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=25.5
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEE
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWS 73 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~ 73 (251)
..||++|....+......+...+.++||..+.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 4789999765555555668888999999887653
No 340
>COG3411 Ferredoxin [Energy production and conversion]
Probab=27.22 E-value=83 Score=18.36 Aligned_cols=29 Identities=10% Similarity=0.210 Sum_probs=21.2
Q ss_pred eEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 218 CEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+.+||. |+|+..-..+.+-+++++++.
T Consensus 18 Pvl~vYpe-gvWY~~V~p~~a~rIv~~hl~ 46 (64)
T COG3411 18 PVLVVYPE-GVWYTRVDPEDARRIVQSHLL 46 (64)
T ss_pred CEEEEecC-CeeEeccCHHHHHHHHHHHHh
Confidence 46778887 798876666677777777765
No 341
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=26.88 E-value=15 Score=26.64 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=22.2
Q ss_pred cEEEEEecCC---CCCCCchhhhhhhcCCCcceEEE
Q 025550 40 NFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKW 72 (251)
Q Consensus 40 ~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~ 72 (251)
..||++|... .+......+.+.+.++||..+.+
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl 187 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTI 187 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEH
Confidence 4699999522 22333445777889999987764
No 342
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=26.46 E-value=1.1e+02 Score=20.14 Aligned_cols=31 Identities=23% Similarity=0.125 Sum_probs=23.1
Q ss_pred cEEEEE-eChhHHHHHHHHHhcCCCcceEEEec
Q 025550 135 NVFVCG-FSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 135 ~i~l~G-~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
||+|+| ..+.|.-.+.+...+|+ +.-+.+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 689999 88999888888888885 44444333
No 343
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=26.29 E-value=64 Score=22.99 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=28.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEc
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSF 74 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~ 74 (251)
.+.+.|+++-|-|.++.+=...++.|.+.|+.+.++.+
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~~ 60 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYLV 60 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEEE
Confidence 45678888889887777777788999999999877554
No 344
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=26.21 E-value=55 Score=25.44 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=15.8
Q ss_pred CcEEEEEeChhHHHHHHHHH
Q 025550 134 NNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~ 153 (251)
.+-.++|||+|=+.|+.++.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 35689999999988876663
No 345
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=25.74 E-value=58 Score=23.83 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=30.1
Q ss_pred EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCC
Q 025550 136 VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMAD 196 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D 196 (251)
.+-+|+++++.+...++ .|+ +.++++.|-..+.-...+.......+.|++++.-.+.
T Consensus 52 ~g~mG~~lpaaiGa~la--~p~--r~vv~i~GDG~f~m~~~eL~Ta~~~~lpvi~vV~NN~ 108 (196)
T cd02013 52 FGNCGYALPAIIGAKAA--APD--RPVVAIAGDGAWGMSMMEIMTAVRHKLPVTAVVFRNR 108 (196)
T ss_pred CcccccHHHHHHHHHHh--CCC--CcEEEEEcchHHhccHHHHHHHHHhCCCeEEEEEECc
Confidence 45567777777777555 443 2355555543333223333333445677776664444
No 346
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=25.65 E-value=27 Score=26.22 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=24.7
Q ss_pred ccEEEEEecCC-CCCCCchhhhhhhcCCCcceEEEE
Q 025550 39 RNFILWLHGLG-DSGPANEPIKTLFTSPEFKLTKWS 73 (251)
Q Consensus 39 ~~~vv~~HG~~-~~~~~~~~~~~~~~~~g~~~~~~~ 73 (251)
...||++|... .+......+...+.++||..+.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 45799999843 333445557888999999887653
No 347
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=25.33 E-value=53 Score=24.14 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=28.2
Q ss_pred EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCC
Q 025550 136 VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMAD 196 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D 196 (251)
.+-+|+++++.+...++ .|++ -++++.|-..+--...+.....+.+.|++++.-.+.
T Consensus 56 ~GsmG~~lpaaiGa~la--~p~~--~vv~i~GDG~f~m~~~eL~Ta~~~~lpviivV~NN~ 112 (202)
T cd02006 56 AGPLGWTVPAALGVAAA--DPDR--QVVALSGDYDFQFMIEELAVGAQHRIPYIHVLVNNA 112 (202)
T ss_pred ccchhhhhHHHHhHHhh--CCCC--eEEEEEeChHhhccHHHHHHHHHhCCCeEEEEEeCc
Confidence 45566666666666554 3432 345555533332222222333344667666654444
No 348
>PRK13936 phosphoheptose isomerase; Provisional
Probab=25.33 E-value=2.6e+02 Score=20.44 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=19.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
..++|.++|..-.+.+|..++...
T Consensus 42 ~a~~I~i~G~G~S~~~A~~~~~~l 65 (197)
T PRK13936 42 NEGKILACGNGGSAADAQHFSAEL 65 (197)
T ss_pred CCCEEEEEeCcHhHHHHHHHHHHc
Confidence 578999999998888888877654
No 349
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=25.24 E-value=1.2e+02 Score=18.51 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=23.4
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhc----CCeeEE
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQA----GISCEF 220 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~----~~~~~~ 220 (251)
....|++++.+.+...++..-.+-+.+.+++. |+++.+
T Consensus 36 ~~~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~G~Pi~l 77 (80)
T PF14714_consen 36 GTRPPTFVLFVNDPELLPESYKRYLENQLREAFGFEGVPIRL 77 (80)
T ss_dssp ETTTTEEEEEES-CCC--HHHHHHHHHHHHHHH--TTS--EE
T ss_pred CCCCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCCceeEEE
Confidence 36789999999887788877666666666663 555544
No 350
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=24.95 E-value=78 Score=22.50 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=28.5
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
+.+|++++++|.-+. +-++.++..|++.|.++++.-.
T Consensus 1 Mk~LIlYstr~GqT~-kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 1 MKTLILYSTRDGQTR-KIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred CceEEEEecCCCcHH-HHHHHHHHHhhhcCCeeeeeeh
Confidence 358999999997643 5667788899988888776544
No 351
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=24.83 E-value=1.3e+02 Score=24.74 Aligned_cols=101 Identities=14% Similarity=0.019 Sum_probs=50.7
Q ss_pred EEEeChhHHHHHHHHHhcCC--CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC
Q 025550 138 VCGFSQGGALTLASVLLYPR--KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215 (251)
Q Consensus 138 l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 215 (251)
..-.|.||.-|+.+++..=. ..++.|.++-+.- ......+...-.++-.+=.+-.....+..+ .+...|++..
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW--~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~---~mla~L~~a~ 170 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARFFPDATVWISDPTW--PNHKAIFEAAGLEVETYPYYDAETKGLDFD---GMLADLKTAP 170 (396)
T ss_pred hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCc--HhHHHHHHhcCCceeeeeccccccccccHH---HHHHHHHhCC
Confidence 44569999999988876311 1233343433221 111122222223343443443333334444 3555555543
Q ss_pred CeeEEEEeCCCCCCC-----CHHHHHHHHHHHHH
Q 025550 216 ISCEFKAYPGLGHSI-----SNEELRNLESWIKT 244 (251)
Q Consensus 216 ~~~~~~~~~g~~H~~-----~~~~~~~~~~~l~~ 244 (251)
. -.++++-+|-|.. +.++++++.+.+.+
T Consensus 171 ~-~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~ 203 (396)
T COG1448 171 E-GSVVLLHGCCHNPTGIDPTEEQWQELADLIKE 203 (396)
T ss_pred C-CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 2 2455666777754 36667777777664
No 352
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=24.17 E-value=2.5e+02 Score=21.92 Aligned_cols=86 Identities=17% Similarity=0.224 Sum_probs=46.1
Q ss_pred EEEEeChhHHHHHHHHHhcCCCcceEEEe-------------ccCCCCcch------hhhhhcccCCCCCEEEEccCCCC
Q 025550 137 FVCGFSQGGALTLASVLLYPRKLGGGAIF-------------SGWVPFNAS------LIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~-------------~~~~~~~~~------~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
-|+|-+.|..++...+.+-. ..-++.+ ++.+++.+. +.+.+-+.-.++|++.-....|+
T Consensus 16 pIig~gaGtGlsAk~ae~gG--aDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v~~tPViaGv~atDP 93 (268)
T PF09370_consen 16 PIIGAGAGTGLSAKCAEKGG--ADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVVKDTPVIAGVCATDP 93 (268)
T ss_dssp -EEEEEESSHHHHHHHHHTT---SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-SSS-EEEEE-TT-T
T ss_pred ceEEEeeccchhhHHHHhcC--CCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhccCCCEEEEecCcCC
Confidence 57788888888888776643 3333333 334443221 11223334467999999999998
Q ss_pred cccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 198 TVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
....+ .+.+.+++.|.. -..-||..|.
T Consensus 94 ~~~~~---~fl~~lk~~Gf~-GV~NfPTvgl 120 (268)
T PF09370_consen 94 FRDMD---RFLDELKELGFS-GVQNFPTVGL 120 (268)
T ss_dssp T--HH---HHHHHHHHHT-S-EEEE-S-GGG
T ss_pred CCcHH---HHHHHHHHhCCc-eEEECCccee
Confidence 86655 688899988754 3334676554
No 353
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.98 E-value=55 Score=25.98 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=15.1
Q ss_pred EEEEeChhHHHHHHHHH
Q 025550 137 FVCGFSQGGALTLASVL 153 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~ 153 (251)
.++|-|.||.+|..++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 79999999999998763
No 354
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=23.75 E-value=94 Score=20.07 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=28.0
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCC-CC---CHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGH-SI---SNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H-~~---~~~~~~~~~~~l~~~l~ 247 (251)
+..+..|.+.|+..|+++++....+ ++ .+ ..+..+.+...+.+++.
T Consensus 10 ~r~AqaF~DYl~sqgI~~~i~~~~~-~~~~lwl~de~~~~~a~~el~~Fl~ 59 (101)
T PF12122_consen 10 PRAAQAFIDYLASQGIELQIEPEGQ-GQFALWLHDEEHLEQAEQELEEFLQ 59 (101)
T ss_dssp HHHHHHHHHHHHHTT--EEEE-SSS-E--EEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCC-CceEEEEeCHHHHHHHHHHHHHHHH
Confidence 3456789999999998888776443 53 22 23456777777777765
No 355
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=23.58 E-value=4.7e+02 Score=22.33 Aligned_cols=105 Identities=17% Similarity=0.120 Sum_probs=49.9
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC-CCCc-ccchhcccch
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM-ADRT-VLFEAGQAGP 208 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~-~D~~-~~~~~~~~~~ 208 (251)
+++++|++..-|..+...+..+...|. ..++.-.|..+........ .....+.-+.-+ .|.. +..+ .+.
T Consensus 109 v~~~~Iiit~Ga~~al~~l~~~l~~pG--d~Vlv~~P~Y~~~~~~~~~----~~g~~~v~v~~~~~~~~~~~~~---~le 179 (468)
T PLN02450 109 FDPNKLVLTAGATSANETLMFCLAEPG--DAFLLPTPYYPGFDRDLKW----RTGVEIVPIHCSSSNGFQITES---ALE 179 (468)
T ss_pred cChHHeEEccChHHHHHHHHHHhCCCC--CEEEECCCCCCchHHHHhh----cCCcEEEEEecCCccCCcCCHH---HHH
Confidence 577787776555555444444444443 4566666655443222211 012223222222 2322 2222 333
Q ss_pred HHHHh---cCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 209 PFLEQ---AGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 209 ~~l~~---~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
+.+++ .+.+++.+.+.+ .|+.+..+..+++++|.++
T Consensus 180 ~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~ 222 (468)
T PLN02450 180 EAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITA 222 (468)
T ss_pred HHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHH
Confidence 44333 233445444442 2445667788888888765
No 356
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.53 E-value=2.6e+02 Score=22.58 Aligned_cols=22 Identities=27% Similarity=0.164 Sum_probs=18.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+.++|.++|-|+.+.++-.+-.
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~ 136 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDK 136 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHH
Confidence 6789999999999988865543
No 357
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=23.43 E-value=1.2e+02 Score=21.54 Aligned_cols=37 Identities=14% Similarity=0.253 Sum_probs=29.6
Q ss_pred CccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEc
Q 025550 38 ARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSF 74 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~ 74 (251)
....+||+-|.++++..-.. +.+.|.+.|...+.+|-
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDG 67 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDG 67 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecC
Confidence 45789999999998877655 55678888998888883
No 358
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.42 E-value=1.6e+02 Score=23.42 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=20.5
Q ss_pred CCCCCcEEEEEeC--hhHHHHHHHHHh
Q 025550 130 GIDPNNVFVCGFS--QGGALTLASVLL 154 (251)
Q Consensus 130 ~~~~~~i~l~G~S--~Gg~~a~~~a~~ 154 (251)
.+..++++++|.| +|-.++.++..+
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4567899999997 999999888654
No 359
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.39 E-value=41 Score=23.11 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCccEEEEEecCCCCC
Q 025550 28 SSYSHEQNPMARNFILWLHGLGDSG 52 (251)
Q Consensus 28 ~~~~~~~~~~~~~~vv~~HG~~~~~ 52 (251)
|.|+|.+.+-+.-.|+|-||+-.++
T Consensus 31 PiYlPAde~vpyhri~FA~GfYaSa 55 (180)
T COG3101 31 PIYLPADEEVPYHRIVFAHGFYASA 55 (180)
T ss_pred ceeccCccCCCceeEEEechhHHHH
Confidence 4566555666788999999987655
No 360
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=23.33 E-value=77 Score=26.31 Aligned_cols=44 Identities=5% Similarity=0.136 Sum_probs=28.1
Q ss_pred CCCCccEEEEEecCCCCCCC-chh-hhhhhc-CCCcceEEEEccCCC
Q 025550 35 NPMARNFILWLHGLGDSGPA-NEP-IKTLFT-SPEFKLTKWSFPSAP 78 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~-~~~-~~~~~~-~~g~~~~~~~~~~~~ 78 (251)
....+.+|+++.|+|++... +.. +.+.++ ..+.+++.++|-.-.
T Consensus 31 ~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~ 77 (403)
T PF11144_consen 31 EKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFC 77 (403)
T ss_pred CCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeehee
Confidence 44566889999999988774 444 444444 335566677776443
No 361
>PTZ00376 aspartate aminotransferase; Provisional
Probab=23.03 E-value=4.4e+02 Score=21.80 Aligned_cols=79 Identities=10% Similarity=0.005 Sum_probs=34.3
Q ss_pred ceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC----CCCCCCHHHH
Q 025550 160 GGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG----LGHSISNEEL 235 (251)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g----~~H~~~~~~~ 235 (251)
..++...|..+................|+ ..+++.-++.+ .+.+.+++...+..+.+.++ .|..+..+..
T Consensus 125 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l---~~~~~~~~d~~---~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~ 198 (404)
T PTZ00376 125 TTVYVSNPTWPNHVNIFKSAGLNVKEYRY---YDPKTKGLDFD---GMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQW 198 (404)
T ss_pred CEEEEcCCCchhHHHHHHHcCCceeeccc---cCcccCCcCHH---HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 45666777665554443333222222222 11122223333 34444443211223444443 1344556667
Q ss_pred HHHHHHHHH
Q 025550 236 RNLESWIKT 244 (251)
Q Consensus 236 ~~~~~~l~~ 244 (251)
+++.++.++
T Consensus 199 ~~l~~~a~~ 207 (404)
T PTZ00376 199 KEIADVMKR 207 (404)
T ss_pred HHHHHHHHh
Confidence 777766654
No 362
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.87 E-value=66 Score=24.68 Aligned_cols=18 Identities=33% Similarity=0.558 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHh
Q 025550 137 FVCGFSQGGALTLASVLL 154 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~ 154 (251)
.++|-|.||.++..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 699999999999988875
No 363
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=22.84 E-value=60 Score=26.37 Aligned_cols=18 Identities=28% Similarity=0.373 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHh
Q 025550 137 FVCGFSQGGALTLASVLL 154 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~ 154 (251)
.+.|-|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 699999999999988864
No 364
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=22.57 E-value=2.6e+02 Score=18.98 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=30.2
Q ss_pred CCEEEEccCCCCcccc----hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 186 TPILWSHGMADRTVLF----EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~----~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
...+.+.|..|..... ...+.+.+.|++.+..+++...++ . .++.+.+.+|+++.|
T Consensus 81 ~k~~avfgtgd~~~~~~~f~~a~~~~~~~l~~~~~~~~i~~~~~---~--~~d~~~~~~~~~~~~ 140 (140)
T TIGR01754 81 PSNVAIFGTGETQWGDDLYCGAVDRLAHFFGSSHPVLKIEQMPH---G--EQDGRAIYDWLEGVL 140 (140)
T ss_pred CCEEEEEEcCCCCcCcchHhHHHHHHHHHHcCcCCceeEecCCc---c--cccHHHHHHHHHHhC
Confidence 3466666666654432 345566666644322344443343 2 346777788877653
No 365
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.20 E-value=96 Score=23.90 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.5
Q ss_pred EEEEEeChhHHHHHHHHHhcC
Q 025550 136 VFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~p 156 (251)
-.+.|-|.|+..+..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 369999999999998887544
No 366
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.11 E-value=83 Score=24.20 Aligned_cols=21 Identities=24% Similarity=0.023 Sum_probs=17.2
Q ss_pred EEEEEeChhHHHHHHHHHhcC
Q 025550 136 VFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 136 i~l~G~S~Gg~~a~~~a~~~p 156 (251)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999998887554
No 367
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=22.02 E-value=4e+02 Score=24.56 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=26.0
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhh-hhcCCCcceEEEEc
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSF 74 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 74 (251)
..++..-|+++||-.+-+..- ++. .....||.++-+..
T Consensus 321 s~RP~kKilLL~GppGlGKTT--LAHViAkqaGYsVvEINA 359 (877)
T KOG1969|consen 321 SKRPPKKILLLCGPPGLGKTT--LAHVIAKQAGYSVVEINA 359 (877)
T ss_pred cCCCccceEEeecCCCCChhH--HHHHHHHhcCceEEEecc
Confidence 445666899999988877653 444 23357999887664
No 368
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.88 E-value=3.3e+02 Score=20.04 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=19.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh
Q 025550 132 DPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
..++|.++|-.-.|.+|..++.+
T Consensus 40 ~~~rI~~~G~GgSa~~A~~~a~~ 62 (196)
T PRK10886 40 NGNKILCCGNGTSAANAQHFAAS 62 (196)
T ss_pred cCCEEEEEECcHHHHHHHHHHHH
Confidence 56899999999889899888875
No 369
>cd06259 YdcF-like YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.
Probab=21.29 E-value=1.8e+02 Score=19.86 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=13.7
Q ss_pred cchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 200 LFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
..+++....+.+++.+. .++.++...-|
T Consensus 79 T~ena~~~~~~~~~~~~-~~i~lVTs~~H 106 (150)
T cd06259 79 TYENARFSAELLRERGI-RSVLLVTSAYH 106 (150)
T ss_pred HHHHHHHHHHHHHhcCC-CeEEEECCHHH
Confidence 44555555556655544 23444444344
No 370
>COG3933 Transcriptional antiterminator [Transcription]
Probab=21.17 E-value=4.1e+02 Score=22.61 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=26.5
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEcc
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFP 75 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 75 (251)
.++...+||..||. +++......+..+...+. ..++|+|
T Consensus 105 ~~~~v~vIiiAHG~-sTASSmaevanrLL~~~~-~~aiDMP 143 (470)
T COG3933 105 QNPRVKVIIIAHGY-STASSMAEVANRLLGEEI-FIAIDMP 143 (470)
T ss_pred cCCceeEEEEecCc-chHHHHHHHHHHHhhccc-eeeecCC
Confidence 34566799999995 455566667776664443 5677887
No 371
>KOG4153 consensus Fructose 1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=21.02 E-value=1e+02 Score=23.85 Aligned_cols=34 Identities=12% Similarity=-0.019 Sum_probs=21.1
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEE
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWS 73 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~ 73 (251)
.++|+.+.+||.+++..+- .+..-+.|..-+.+|
T Consensus 255 ~~KpvFlVfHGgSGssvne---fktgIenGVvKvNvd 288 (358)
T KOG4153|consen 255 SKKPVFLVFHGGSGSSVNE---FKTGIENGVVKVNVD 288 (358)
T ss_pred ccCceEEEEeCCCCccHHH---HHHHHhcCeEEEeec
Confidence 5779999999988766542 222334555544443
No 372
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=20.98 E-value=5.2e+02 Score=21.95 Aligned_cols=86 Identities=7% Similarity=-0.069 Sum_probs=44.3
Q ss_pred CCcEEEEEeChhHHHH-HHHHHhcCCCcceEEEeccCCCCcc-hhhhhhcccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 133 PNNVFVCGFSQGGALT-LASVLLYPRKLGGGAIFSGWVPFNA-SLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a-~~~a~~~p~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
+.+++++..|-+=..+ +.++....-.+..+++++...+... ++.+.+. ....+.+++++.+. ..+.++|.+.
T Consensus 150 ~G~valvsqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~d~~~~d~l~~l~-~D~~t~~I~ly~E~-----~~~~~~f~~a 223 (447)
T TIGR02717 150 KGGIAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLA-DDPDTKVILLYLEG-----IKDGRKFLKT 223 (447)
T ss_pred CCCEEEEechHHHHHHHHHHHHhcCCCcceEEECCchhhCCHHHHHHHHh-hCCCCCEEEEEecC-----CCCHHHHHHH
Confidence 4579999777653222 2334445556788888776554322 2222222 23456666666553 1223456666
Q ss_pred HHhcCCeeEEEEeC
Q 025550 211 LEQAGISCEFKAYP 224 (251)
Q Consensus 211 l~~~~~~~~~~~~~ 224 (251)
+++....+-++.++
T Consensus 224 a~~a~~~KPVv~~k 237 (447)
T TIGR02717 224 AREISKKKPIVVLK 237 (447)
T ss_pred HHHHcCCCCEEEEe
Confidence 65543233444444
No 373
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=20.94 E-value=3e+02 Score=19.17 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=24.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEE
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTK 71 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~ 71 (251)
+..+++.--|..++...-.-+++.|++.||.++.
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~ 45 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAGFEVIN 45 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCCceEEe
Confidence 3345566667666666666688899999997763
No 374
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=20.25 E-value=1.4e+02 Score=20.75 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=10.4
Q ss_pred EEEEEeChhHHH
Q 025550 136 VFVCGFSQGGAL 147 (251)
Q Consensus 136 i~l~G~S~Gg~~ 147 (251)
..++|.|.|+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 588999999966
No 375
>PTZ00445 p36-lilke protein; Provisional
Probab=20.16 E-value=1.8e+02 Score=21.89 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=37.6
Q ss_pred hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 025550 58 IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVF 137 (251)
Q Consensus 58 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~ 137 (251)
+.+.|.+.|+.++.+|+-..-. +-...+|.+... .+..-+......+..++..+.+.++ +|+
T Consensus 34 ~v~~L~~~GIk~Va~D~DnTlI-------~~HsgG~~~~~~--------~~~~~~~~~tpefk~~~~~l~~~~I---~v~ 95 (219)
T PTZ00445 34 FVDLLNECGIKVIASDFDLTMI-------TKHSGGYIDPDN--------DDIRVLTSVTPDFKILGKRLKNSNI---KIS 95 (219)
T ss_pred HHHHHHHcCCeEEEecchhhhh-------hhhcccccCCCc--------chhhhhccCCHHHHHHHHHHHHCCC---eEE
Confidence 6778999999999999853211 111122322210 0111222223345555555445565 588
Q ss_pred EEEeChhH
Q 025550 138 VCGFSQGG 145 (251)
Q Consensus 138 l~G~S~Gg 145 (251)
|+=||-=-
T Consensus 96 VVTfSd~~ 103 (219)
T PTZ00445 96 VVTFSDKE 103 (219)
T ss_pred EEEccchh
Confidence 88888643
No 376
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=20.10 E-value=3.3e+02 Score=19.32 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+.+.++++.+.+.+. ..++|.++|...-+.++..++..
T Consensus 16 ~~~i~~a~~~i~~~i~-------~~~~I~i~G~G~S~~~A~~~~~~ 54 (177)
T cd05006 16 AEAIEQAAQLLAEALL-------NGGKILICGNGGSAADAQHFAAE 54 (177)
T ss_pred HHHHHHHHHHHHHHHH-------CCCEEEEEeCcHHHHHHHHHHHH
Confidence 3444444444444333 45789999998777777666543
Done!