Your job contains 1 sequence.
>025552
MDRYQRVEKPKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKT
VTIVELIKRRIVGLHQNTVIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELNRS
SVGYQPPLPAEQVKPLIEFDYDGEGSPNGPRRGRSGRGRSRGRGNGFVSAEYEDGGWDRN
NRGYSRGRGRGRGRSFRGRGRGGYNGPHFDARQDGGYNYEAPPQGSGRGRGRGNRGRGRG
NRANGPIQAAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025552
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198551 - symbol:AT1G20220 species:3702 "Arabi... 539 8.4e-59 3
TAIR|locus:2204400 - symbol:AT1G76010 species:3702 "Arabi... 585 7.5e-57 1
TAIR|locus:2077547 - symbol:AT3G07030 species:3702 "Arabi... 388 5.7e-36 1
UNIPROTKB|E1BQE8 - symbol:RPP25 "Uncharacterized protein"... 192 3.3e-15 1
DICTYBASE|DDB_G0281409 - symbol:drpp25 "RNase MRP protein... 195 5.0e-15 1
RGD|1306576 - symbol:Rpp25l "ribonuclease P/MRP 25 subuni... 181 4.9e-14 1
MGI|MGI:1917211 - symbol:Rpp25l "ribonuclease P/MRP 25 su... 180 6.2e-14 1
UNIPROTKB|Q8N5L8 - symbol:RPP25L "Ribonuclease P protein ... 175 2.1e-13 1
UNIPROTKB|F1SEB9 - symbol:RPP25L "Uncharacterized protein... 175 2.1e-13 1
UNIPROTKB|E2R227 - symbol:LOC486757 "Uncharacterized prot... 174 2.7e-13 1
UNIPROTKB|E2RC74 - symbol:C11H9orf23 "Uncharacterized pro... 174 2.7e-13 1
ZFIN|ZDB-GENE-040718-275 - symbol:rpp25l "ribonuclease P/... 137 3.4e-13 2
UNIPROTKB|Q2KIR4 - symbol:RPP25L "Ribonuclease P protein ... 166 1.9e-12 1
UNIPROTKB|E1C3A2 - symbol:CZH9orf23 "Uncharacterized prot... 159 1.0e-11 1
UNIPROTKB|F1SJ50 - symbol:RPP25 "Uncharacterized protein"... 153 4.5e-11 1
MGI|MGI:2143151 - symbol:Rpp25 "ribonuclease P/MRP 25 sub... 148 1.5e-10 1
RGD|1305290 - symbol:Rpp25 "ribonuclease P/MRP 25 subunit... 148 1.5e-10 1
UNIPROTKB|E1BK83 - symbol:RPP25 "Uncharacterized protein"... 147 2.0e-10 1
UNIPROTKB|Q9BUL9 - symbol:RPP25 "Ribonuclease P protein s... 145 3.2e-10 1
DICTYBASE|DDB_G0289139 - symbol:drpp20 "RNase MRP protein... 103 0.00069 1
>TAIR|locus:2198551 [details] [associations]
symbol:AT1G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009505 "plant-type cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0009506 GO:GO:0003676 GO:GO:0009505
UniGene:At.15439 OMA:EANEVRI EMBL:AF439833 EMBL:BT020430
IPI:IPI00519675 RefSeq:NP_564108.1 HSSP:O28323
ProteinModelPortal:Q944A2 SMR:Q944A2 STRING:Q944A2 PRIDE:Q944A2
EnsemblPlants:AT1G20220.1 GeneID:838610 KEGG:ath:AT1G20220
Genevestigator:Q944A2 Uniprot:Q944A2
Length = 315
Score = 539 (194.8 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 107/144 (74%), Positives = 118/144 (81%)
Query: 1 MDRYQRVEKPKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKT 60
MD+YQRVEKPKA+TPI ENEIRITS GR R+YITYAM LLQE SNE++FKAMGRAINK+
Sbjct: 1 MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60
Query: 61 VTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTTRHVSMITITLSKKELNRS 120
VTIVELIKRRI GLHQ T IGSTDITDTW TTRHVSMITITLSK++LN S
Sbjct: 61 VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120
Query: 121 SVGYQPPLPAEQVKPLIEFDYDGE 144
SVGYQ P+P E VKPL E DY+G+
Sbjct: 121 SVGYQCPIPIEMVKPLAEIDYEGQ 144
Score = 56 (24.8 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 207 PHFDARQDGG---YNYEAPP 223
P+++A+QDGG YN APP
Sbjct: 253 PYYEAQQDGGDYGYNNVAPP 272
Score = 38 (18.4 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 167 FVSAEYEDGG 176
+V+ EY+DGG
Sbjct: 192 YVNNEYDDGG 201
Score = 35 (17.4 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 212 RQDGGYNYEAPP 223
R GGYN PP
Sbjct: 242 RGRGGYNGPPPP 253
>TAIR|locus:2204400 [details] [associations]
symbol:AT1G76010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0003676 EMBL:AF412102 EMBL:AY054208
EMBL:AF428441 EMBL:AY124847 IPI:IPI00531013 RefSeq:NP_565124.1
UniGene:At.24580 UniGene:At.67776 UniGene:At.75066 HSSP:P60849
ProteinModelPortal:Q93VA8 SMR:Q93VA8 STRING:Q93VA8 PRIDE:Q93VA8
EnsemblPlants:AT1G76010.1 GeneID:843932 KEGG:ath:AT1G76010
TAIR:At1g76010 HOGENOM:HOG000240806 InParanoid:Q93VA8 OMA:YDGPPQG
PhylomeDB:Q93VA8 ProtClustDB:CLSN2917456 Genevestigator:Q93VA8
Uniprot:Q93VA8
Length = 350
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 126/228 (55%), Positives = 143/228 (62%)
Query: 1 MDRYQRVEKPKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKT 60
MD+YQRV KPKA+TPID NEIRITSQGR R+YITYAMTLLQ++GS E+VFKAMGRAINKT
Sbjct: 1 MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60
Query: 61 VTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTTRHVSMITITLSKKELNRS 120
VTIVELIKRRI LHQNT IGSTDITDTW TTRHVSMITITLSK ELN S
Sbjct: 61 VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120
Query: 121 SVGYQPPLPAEQVKPLIEFDYDGEXXX-----XXXXXXXXXXXXXXXXXXXFVSAEYEDG 175
SVGYQ P+P E VKP+ + DY+G +V+ E+EDG
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180
Query: 176 GWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXPH-FDARQDGGYNYEAP 222
GW+ P+ +DA QDGGY Y+AP
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAP 228
>TAIR|locus:2077547 [details] [associations]
symbol:AT3G07030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002775 Pfam:PF01918
GO:GO:0005829 EMBL:CP002686 GO:GO:0003676 IPI:IPI00519674
RefSeq:NP_187359.2 UniGene:At.74527 ProteinModelPortal:F4JD88
SMR:F4JD88 PRIDE:F4JD88 EnsemblPlants:AT3G07030.1 GeneID:3768790
KEGG:ath:AT3G07030 OMA:ERRNDGY Uniprot:F4JD88
Length = 405
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 78/135 (57%), Positives = 97/135 (71%)
Query: 1 MDRYQRVEKPKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKT 60
MDRYQRV KPK E+PI+ENEIRITS+G +R+YI+YA +LLQE+ +IV KAMG+AI+KT
Sbjct: 1 MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60
Query: 61 VTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTTRHVSMITITLSKKELNRS 120
V I E++K +I GLHQ+ I S ITD W TRHVSMI+ITLS ELN+
Sbjct: 61 VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120
Query: 121 SVGYQPPLPAEQVKP 135
S GYQ P ++Q KP
Sbjct: 121 SPGYQAPAQSDQSKP 135
>UNIPROTKB|E1BQE8 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:AVHMRVK EMBL:AADN02051023
IPI:IPI00582710 Ensembl:ENSGALT00000040041 Uniprot:E1BQE8
Length = 164
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 1 MDRYQRVEKPKAETPID-EN------EIRITSQGRMRSYITYAMTLLQERGSNEIVFKAM 53
M+ +++V + E+P+ N E+++ ++R+ +++AM ++ +GS +IVF
Sbjct: 1 MENFRKVRTSEEESPLPFPNLPPGVVEMKVKEGSKIRNLMSFAMAQMELKGSRQIVFSGC 60
Query: 54 GRAINKTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXX----XXXXXXXTTRHVSMIT 109
GRA+ KT+T VE++KR++ GLHQ T + + + W ++V I
Sbjct: 61 GRAVTKTITCVEIMKRKLGGLHQVTKVRYKTLLEVWENQDPLPGGAAQNLTVHKNVPSIC 120
Query: 110 ITLSKKELNRSSVGYQPPLPAE 131
I LS+ L+ + GYQPP P E
Sbjct: 121 ILLSRDPLDPNQTGYQPPEPRE 142
>DICTYBASE|DDB_G0281409 [details] [associations]
symbol:drpp25 "RNase MRP protein subunit"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 dictyBase:DDB_G0281409
GenomeReviews:CM000152_GR GO:GO:0003676 EMBL:AAFI02000041
eggNOG:NOG240130 RefSeq:XP_640657.1 ProteinModelPortal:Q54U04
EnsemblProtists:DDB0237623 GeneID:8623041 KEGG:ddi:DDB_G0281409
OMA:EANEVRI ProtClustDB:CLSZ2846784 Uniprot:Q54U04
Length = 369
Score = 195 (73.7 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 51/145 (35%), Positives = 77/145 (53%)
Query: 1 MDRYQRVEKPKAETPIDENEIRITS-QGRMRSYITYAMTLLQERGSNEIVFKAMG-RAIN 58
MD+Y RV + + + NE+RI ++ S I Y + L + + I+ KA+G + I+
Sbjct: 1 MDKYYRVPRTY-DNDTEANEVRIGGVHSQVSSSIEYGLNLFN-KPHDSIIVKAIGSKMIS 58
Query: 59 KTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTTRHVSMITITLSKKELN 118
K + E+IK R+ GLHQ T IG+T+I + ++ + I ITLSK L+
Sbjct: 59 KAIFTAEIIKLRVPGLHQITEIGTTEIVTQYMPKEEGLDKVEISKKSAFIKITLSKTPLD 118
Query: 119 RSSVGYQPPLPAE--QVKPLIEFDY 141
++ GYQPPLP Q KP DY
Sbjct: 119 TTNPGYQPPLPESETQKKPTRPRDY 143
>RGD|1306576 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 RGD:1306576
GO:GO:0003676 EMBL:CH473962 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:BC158601 IPI:IPI00561916 RefSeq:NP_001100118.1
UniGene:Rn.21605 Ensembl:ENSRNOT00000049032 GeneID:298002
KEGG:rno:298002 UCSC:RGD:1306576 NextBio:642945
Genevestigator:B0BMX6 Uniprot:B0BMX6
Length = 163
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 44/136 (32%), Positives = 68/136 (50%)
Query: 1 MDRYQR---VEKPKA----ETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAM 53
M+ Y+R VE P + + P D E+R+ ++R+ + A+ L+ + +VF
Sbjct: 1 MEHYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALARLEGGSTRHVVFSGS 60
Query: 54 GRAINKTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITIT 111
GRA K V+ E++KRR+ GLHQ T + D+W T RHV + +
Sbjct: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120
Query: 112 LSKKELNRSSVGYQPP 127
LS+ L+ S GYQPP
Sbjct: 121 LSRDPLDPSECGYQPP 136
>MGI|MGI:1917211 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:1917211 GO:GO:0005634
GO:GO:0003676 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:AJ293897 EMBL:AK013222 EMBL:BC047068 IPI:IPI00319955
RefSeq:NP_081554.2 UniGene:Mm.425182 ProteinModelPortal:Q99JH1
PhosphoSite:Q99JH1 PaxDb:Q99JH1 PRIDE:Q99JH1
Ensembl:ENSMUST00000038434 GeneID:69961 KEGG:mmu:69961
InParanoid:Q99JH1 NextBio:330689 Bgee:Q99JH1
CleanEx:MM_2810432D09RIK Genevestigator:Q99JH1 Uniprot:Q99JH1
Length = 163
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/136 (32%), Positives = 69/136 (50%)
Query: 1 MDRYQR---VEKPKA----ETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAM 53
M++Y+R VE P + + P D E+R+ ++R+ + A+ L+ + +VF
Sbjct: 1 MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGS 60
Query: 54 GRAINKTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITIT 111
GRA K V+ E++KRR+ GLHQ T + D+W T RHV + +
Sbjct: 61 GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120
Query: 112 LSKKELNRSSVGYQPP 127
LS+ L+ S GYQPP
Sbjct: 121 LSRDPLDPSECGYQPP 136
>UNIPROTKB|Q8N5L8 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:CH471071 EMBL:AL160270 CTD:138716 eggNOG:NOG240130
HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR EMBL:BC032136 IPI:IPI00166873 RefSeq:NP_680544.1
RefSeq:NP_680545.1 UniGene:Hs.15961 ProteinModelPortal:Q8N5L8
SMR:Q8N5L8 PhosphoSite:Q8N5L8 DMDM:74751030 PeptideAtlas:Q8N5L8
PRIDE:Q8N5L8 DNASU:138716 Ensembl:ENST00000297613
Ensembl:ENST00000378959 GeneID:138716 KEGG:hsa:138716
UCSC:uc003zuu.3 GeneCards:GC09M034610 H-InvDB:HIX0007998
HGNC:HGNC:19909 HPA:HPA052187 neXtProt:NX_Q8N5L8
PharmGKB:PA134989644 InParanoid:Q8N5L8 PhylomeDB:Q8N5L8
GenomeRNAi:138716 NextBio:83819 Bgee:Q8N5L8 CleanEx:HS_C9orf23
Genevestigator:Q8N5L8 Uniprot:Q8N5L8
Length = 163
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKR 69
P + P D E+R+ ++R+ + A+ L+ + +VF GRA K V+ E++KR
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76
Query: 70 RIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITITLSKKELNRSSVGYQPP 127
R+ GLHQ T + D+W T RHV + + LS+ L+ + GYQPP
Sbjct: 77 RVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
>UNIPROTKB|F1SEB9 [details] [associations]
symbol:RPP25L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS EMBL:CU928717
RefSeq:XP_003130706.1 RefSeq:XP_003130707.1 RefSeq:XP_003130708.1
RefSeq:XP_003130709.1 UniGene:Ssc.2538 Ensembl:ENSSSCT00000012010
GeneID:100522095 KEGG:ssc:100522095 Uniprot:F1SEB9
Length = 163
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKR 69
P + P D E+R+ ++R+ + A+ L+ + +VF GRA K V+ E++KR
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76
Query: 70 RIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITITLSKKELNRSSVGYQPP 127
R+ GLHQ T + D+W T RHV + + LS+ L+ + GYQPP
Sbjct: 77 RVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
>UNIPROTKB|E2R227 [details] [associations]
symbol:LOC486757 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:VTRMAYT
EMBL:AAEX03015333 RefSeq:XP_003433592.1 ProteinModelPortal:E2R227
Ensembl:ENSCAFT00000025376 GeneID:486757 KEGG:cfa:486757
NextBio:20860484 Uniprot:E2R227
Length = 163
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKR 69
P + P D E+R+ ++R+ + A+ L+ + +VF GRA K V+ E++KR
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76
Query: 70 RIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITITLSKKELNRSSVGYQPP 127
R+ GLHQ T + D+W T RHV + + LS+ L+ + GYQPP
Sbjct: 77 RVPGLHQLTKLHFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
>UNIPROTKB|E2RC74 [details] [associations]
symbol:C11H9orf23 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS
EMBL:AAEX03007945 RefSeq:XP_538708.1 ProteinModelPortal:E2RC74
Ensembl:ENSCAFT00000003037 GeneID:481586 KEGG:cfa:481586 CTD:481586
NextBio:20856348 Uniprot:E2RC74
Length = 163
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKR 69
P + P D E+R+ ++R+ + A+ L+ + +VF GRA K V+ E++KR
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76
Query: 70 RIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITITLSKKELNRSSVGYQPP 127
R+ GLHQ T + D+W T RHV + + LS+ L+ + GYQPP
Sbjct: 77 RVPGLHQLTKLRFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
>ZFIN|ZDB-GENE-040718-275 [details] [associations]
symbol:rpp25l "ribonuclease P/MRP 25 subunit-like"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002775
Pfam:PF01918 ZFIN:ZDB-GENE-040718-275 GO:GO:0003676 CTD:138716
HOVERGEN:HBG056729 KO:K14525 EMBL:BC076268 IPI:IPI00482110
RefSeq:NP_001002540.1 UniGene:Dr.83100 ProteinModelPortal:Q6DGS1
STRING:Q6DGS1 GeneID:436813 KEGG:dre:436813 InParanoid:Q6DGS1
NextBio:20831245 ArrayExpress:Q6DGS1 Uniprot:Q6DGS1
Length = 224
Score = 137 (53.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 47 EIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RH 104
+IVF +G+++ K +T VE++KRRI GLHQ T + + D W T R+
Sbjct: 73 QIVFTGVGQSVAKAITCVEIMKRRIHGLHQLTKLAYRTLQDVWEPLEPGAGLDSLTVSRN 132
Query: 105 VSMITITLSKKELNRSSVGYQPP 127
V I + LS+ L+++ GYQ P
Sbjct: 133 VPSIWVLLSRDSLDKNQPGYQAP 155
Score = 50 (22.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQE 42
P + P D E+R+ ++R+ + +A++ ++E
Sbjct: 17 PFPDLPSDTPEVRVKDGSKIRNLMRFALSRMEE 49
>UNIPROTKB|Q2KIR4 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:BC112539 IPI:IPI00697463 RefSeq:NP_001039576.1
UniGene:Bt.20332 Ensembl:ENSBTAT00000021677 GeneID:512203
KEGG:bta:512203 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 InParanoid:Q2KIR4 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR NextBio:20870285 Uniprot:Q2KIR4
Length = 163
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 10 PKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKR 69
P + P D E+R+ + ++R+ + A+ L+ + +VF GRA K V+ E++KR
Sbjct: 17 PMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKR 76
Query: 70 RIVGLHQNTVIGSTDITDTWXXXXXXXXXX-XTTR-HVSMITITLSKKELNRSSVGYQPP 127
R+ GL+Q T + D+W T R HV + + LS+ L+ + GYQPP
Sbjct: 77 RVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPP 136
>UNIPROTKB|E1C3A2 [details] [associations]
symbol:CZH9orf23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:MKVKDGS EMBL:AADN02068971
IPI:IPI00577474 Ensembl:ENSGALT00000009367 Uniprot:E1C3A2
Length = 170
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 1 MDRYQR---VEKPK----AETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAM 53
M+ Y++ VEKP + P D E+++ ++R+ + YA+ ++ +I+F
Sbjct: 1 MENYKKTKIVEKPCPLPFTDLPPDIIEMKVKDGSKIRNLMGYAIGKMELDSVRQILFTGS 60
Query: 54 GRAINKTVTIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTT--RHVSMITIT 111
G+A++KT+T VE++KRR+ LHQ T + I + W T R++ I +
Sbjct: 61 GKAVSKTITCVEIMKRRLKELHQITKVLFKQIEEIWEPIVPEAGLDALTVKRNIPAICVL 120
Query: 112 LSKKELNRSSVGYQPP 127
LSK L+ GYQ P
Sbjct: 121 LSKDALDPQEPGYQAP 136
>UNIPROTKB|F1SJ50 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:CU407105 Ensembl:ENSSSCT00000002114 Uniprot:F1SJ50
Length = 199
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 21 IRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVI 80
+R+ ++R+ + +A + + + IVF GRA KTVT E++KRR+VGLHQ T +
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLVGLHQVTRL 97
Query: 81 GSTDITDTWXXX----------XXXXXXXXTTRHVSMITITLSKKELNRSSVGYQPPLP 129
+ + W ++V + I LSK L+ GYQPP P
Sbjct: 98 RYRSVREVWQSLPPEPTPDQKPDEPAASLTVLKNVPSLAILLSKDALDPRQPGYQPPSP 156
>MGI|MGI:2143151 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:2143151 GO:GO:0005634
GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:AK082822 EMBL:BC016085
EMBL:BC083064 IPI:IPI00128066 RefSeq:NP_598743.1 UniGene:Mm.274421
ProteinModelPortal:Q91WE3 STRING:Q91WE3 PhosphoSite:Q91WE3
PRIDE:Q91WE3 Ensembl:ENSMUST00000080514 GeneID:102614
KEGG:mmu:102614 UCSC:uc009puy.1 InParanoid:Q91WE3 NextBio:355562
Bgee:Q91WE3 CleanEx:MM_RPP25 Genevestigator:Q91WE3
GermOnline:ENSMUSG00000062309 Uniprot:Q91WE3
Length = 199
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 21 IRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVI 80
+R+ ++R+ + +A + + + IVF GRA KTVT E++KRR+ GLHQ T +
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97
Query: 81 GSTDITDTWXXX----------XXXXXXXXTTRHVSMITITLSKKELNRSSVGYQPP 127
+ + W ++V + I LSK L+ +GYQPP
Sbjct: 98 RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154
>RGD|1305290 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004526 "ribonuclease P activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002775 Pfam:PF01918 RGD:1305290
GO:GO:0005634 GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:BC087592 IPI:IPI00194381
RefSeq:NP_001012124.1 UniGene:Rn.13924 ProteinModelPortal:Q5PPN2
STRING:Q5PPN2 PhosphoSite:Q5PPN2 Ensembl:ENSRNOT00000025410
GeneID:315705 KEGG:rno:315705 UCSC:RGD:1305290 InParanoid:Q5PPN2
NextBio:669696 Genevestigator:Q5PPN2 GermOnline:ENSRNOG00000018812
Uniprot:Q5PPN2
Length = 199
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 21 IRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVI 80
+R+ ++R+ + +A + + + IVF GRA KTVT E++KRR+ GLHQ T +
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97
Query: 81 GSTDITDTWXXX----------XXXXXXXXTTRHVSMITITLSKKELNRSSVGYQPP 127
+ + W ++V + I LSK L+ +GYQPP
Sbjct: 98 RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154
>UNIPROTKB|E1BK83 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:DAAA02052494 IPI:IPI00695922 Ensembl:ENSBTAT00000028907
Uniprot:E1BK83
Length = 199
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 21 IRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVI 80
+R+ ++R+ + +A + + + IVF GRA KTVT E++KRR+ GLHQ T +
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97
Query: 81 GSTDITDTWXXX----------XXXXXXXXTTRHVSMITITLSKKELNRSSVGYQPPLP 129
+ + W ++V + I LSK L+ GYQPP P
Sbjct: 98 RYQSVRELWQSLPPEPTPGQKPGEPAASLSVLKNVPSLAILLSKDALDPRQPGYQPPNP 156
>UNIPROTKB|Q9BUL9 [details] [associations]
symbol:RPP25 "Ribonuclease P protein subunit p25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005739 GO:GO:0005634
GO:GO:0005813 GO:GO:0003723 EMBL:CH471136 GO:GO:0008033
GO:GO:0004526 HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525
OrthoDB:EOG49ZXQR EMBL:AY034074 EMBL:AK000381 EMBL:BC002497
EMBL:BC007270 IPI:IPI00306056 RefSeq:NP_060263.2 UniGene:Hs.8562
ProteinModelPortal:Q9BUL9 IntAct:Q9BUL9 STRING:Q9BUL9
PhosphoSite:Q9BUL9 DMDM:74733233 PaxDb:Q9BUL9 PeptideAtlas:Q9BUL9
PRIDE:Q9BUL9 DNASU:54913 Ensembl:ENST00000322177
Ensembl:ENST00000499788 GeneID:54913 KEGG:hsa:54913 UCSC:uc002azj.1
CTD:54913 GeneCards:GC15M075247 HGNC:HGNC:30361 HPA:HPA046900
neXtProt:NX_Q9BUL9 PharmGKB:PA134990737 eggNOG:NOG247262
InParanoid:Q9BUL9 OMA:AVHMRVK PhylomeDB:Q9BUL9 GenomeRNAi:54913
NextBio:57966 Bgee:Q9BUL9 CleanEx:HS_RPP25 Genevestigator:Q9BUL9
GermOnline:ENSG00000178718 Uniprot:Q9BUL9
Length = 199
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 21 IRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTVI 80
+R+ ++R+ + +A + + + IVF GRA KTVT E++KRR+ GLHQ T +
Sbjct: 38 MRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97
Query: 81 GSTDITDTWXXXXXXXXXXXTT----------RHVSMITITLSKKELNRSSVGYQPPLP 129
+ + W T ++V + I LSK L+ GYQPP P
Sbjct: 98 RYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDALDPRQPGYQPPNP 156
>DICTYBASE|DDB_G0289139 [details] [associations]
symbol:drpp20 "RNase MRP protein subunit"
species:44689 "Dictyostelium discoideum" [GO:0004526 "ribonuclease
P activity" evidence=IEA;IDA] [GO:0030677 "ribonuclease P complex"
evidence=IDA] [GO:0008033 "tRNA processing" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005655 "nucleolar ribonuclease P
complex" evidence=ISS] InterPro:IPR002775 InterPro:IPR014612
Pfam:PF01918 dictyBase:DDB_G0289139 GenomeReviews:CM000154_GR
GO:GO:0003676 GO:GO:0008033 EMBL:AAFI02000130 GO:GO:0005655
GO:GO:0004526 KO:K14527 PANTHER:PTHR15314 EMBL:DQ295794
RefSeq:XP_636377.1 ProteinModelPortal:Q54HY6
EnsemblProtists:DDB0233169 GeneID:8626978 KEGG:ddi:DDB_G0289139
eggNOG:NOG258721 InParanoid:Q54HY6 OMA:HASAIHI Uniprot:Q54HY6
Length = 228
Score = 103 (41.3 bits), Expect = 0.00069, P = 0.00069
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 4 YQR--VEKPKAETPIDENEIRITSQGRMRSYITYAMTLLQERGSNEIVFKAMGRAINKTV 61
Y R V++P A+ +NEI +++ G+ Y+ A LL + EI+ +G AI+ V
Sbjct: 45 YMRRVVQRPYAK----KNEIYLSNNGKFLYYVKRAKNLLFNQREKEIIIHGLGAAISLAV 100
Query: 62 TIVELIKRRIVGLHQNTVIGSTDITDTWXXXXXXXXXXXTTRHVSMITITL 112
+ +++ I GL +T S +I D + RH S I I +
Sbjct: 101 ELSLYLQKDIEGLTLSTTTSSEEIIDQYDPLVNDLEPVLKIRHASAIHIKI 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 169 0.00082 108 3 11 22 0.43 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 554 (59 KB)
Total size of DFA: 137 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.78u 0.15s 12.93t Elapsed: 00:00:00
Total cpu time: 12.78u 0.15s 12.93t Elapsed: 00:00:00
Start: Fri May 10 14:27:33 2013 End: Fri May 10 14:27:33 2013