Query 025554
Match_columns 251
No_of_seqs 139 out of 1340
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:40:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025554.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025554hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 1.5E-41 5E-46 295.3 22.0 213 29-247 21-260 (307)
2 2i0o_A Ser/Thr phosphatase; be 100.0 5.1E-41 1.7E-45 291.5 22.8 211 29-247 20-259 (304)
3 3qn1_B Protein phosphatase 2C 100.0 3.3E-41 1.1E-45 296.6 20.0 212 33-247 15-273 (337)
4 2iq1_A Protein phosphatase 2C 100.0 1.7E-40 5.7E-45 284.3 22.6 215 29-247 5-228 (274)
5 3kdj_B Protein phosphatase 2C 100.0 8.2E-41 2.8E-45 291.7 19.3 211 31-247 8-244 (316)
6 1a6q_A Phosphatase 2C; catalyt 100.0 1.7E-40 5.9E-45 296.2 19.7 212 30-247 20-254 (382)
7 4da1_A Protein phosphatase 1K, 100.0 3.1E-40 1.1E-44 295.6 20.6 233 11-247 99-342 (389)
8 2isn_A NYSGXRC-8828Z, phosphat 100.0 8.5E-40 2.9E-44 290.2 21.0 202 30-239 11-284 (364)
9 3d8k_A PP2C, protein phosphata 100.0 3.1E-39 1.1E-43 287.5 18.3 208 29-246 10-284 (377)
10 2i44_A Serine-threonine phosph 100.0 1.2E-38 4.1E-43 278.9 19.2 214 30-247 20-281 (324)
11 2j4o_A Mitogen-activated prote 100.0 1.7E-39 5.8E-44 291.7 11.7 220 23-247 18-313 (401)
12 2irm_A Mitogen-activated prote 100.0 4E-39 1.4E-43 285.5 13.7 194 37-239 25-283 (358)
13 2pnq_A [pyruvate dehydrogenase 100.0 2E-38 6.9E-43 289.1 16.2 215 31-247 36-362 (467)
14 2pk0_A Serine/threonine protei 100.0 5.6E-36 1.9E-40 252.4 17.1 202 30-246 4-211 (250)
15 2j82_A TPPHA, protein serine-t 100.0 3.3E-35 1.1E-39 246.1 18.1 198 32-246 1-207 (240)
16 1txo_A Putative bacterial enzy 100.0 3.1E-35 1.1E-39 246.0 17.8 197 30-247 3-203 (237)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 1.5E-34 5E-39 241.4 16.9 193 30-247 4-201 (234)
18 3rnr_A Stage II sporulation E 100.0 1.5E-30 5.1E-35 214.3 16.0 162 61-242 8-175 (211)
19 3t91_A Stage II sporulation pr 99.7 3.2E-17 1.1E-21 137.0 13.6 161 28-240 4-169 (242)
20 3pu9_A Protein serine/threonin 99.7 2.8E-15 9.6E-20 125.4 18.5 161 31-240 10-172 (242)
21 3f79_A Probable two-component 99.5 6.5E-13 2.2E-17 111.6 16.0 165 29-241 35-206 (255)
22 3zt9_A Serine phosphatase; hyd 99.5 4.4E-12 1.5E-16 102.3 19.7 156 30-241 2-159 (193)
23 3ke6_A Protein RV1364C/MT1410; 98.7 8.4E-07 2.9E-11 79.1 18.6 159 28-241 32-197 (399)
24 3eq2_A Probable two-component 98.2 4.5E-05 1.5E-09 67.4 14.8 163 30-240 175-344 (394)
25 3out_A Glutamate racemase; str 27.1 34 0.0012 28.0 2.5 23 65-87 9-32 (268)
26 2ww6_A Fibritin, T4 fibritin; 26.5 47 0.0016 17.0 2.0 17 146-162 9-25 (27)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=295.34 Aligned_cols=213 Identities=31% Similarity=0.472 Sum_probs=178.9
Q ss_pred CCCceEEEEeecCCCCCCCCceEEEEeeecC-CCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCC-----------
Q 025554 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFW----------- 96 (251)
Q Consensus 29 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~----------- 96 (251)
...++||+.+++|+|+ .|||++++...... ..+..+|+|||||||+.+|+++++.+++.+.+...+.
T Consensus 21 ~~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (307)
T 2p8e_A 21 GNGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL 99 (307)
T ss_dssp ETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred CCCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence 3689999999999987 89999987544322 2356899999999999999999999999987643222
Q ss_pred --CCHHHHHHHHHHHHHHHHHhccCC--CCCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCCC--chH
Q 025554 97 --VDPQRSISKAYEKTDQAILSHSSD--LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TER 170 (251)
Q Consensus 97 --~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~--~e~ 170 (251)
..+.++|+++|..+|+.+.+.... ....+|||++++++.++++|++||||||+|++|+|++++||+||++. .|+
T Consensus 100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~ 179 (307)
T 2p8e_A 100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREK 179 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHH
Confidence 235788999999999999876432 23567899999999999999999999999999999999999999998 789
Q ss_pred HHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCC---------CceecceEEEEEecCCCeEEEEEcCCCCCCCCCH
Q 025554 171 GSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS---------HLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFF 241 (251)
Q Consensus 171 ~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~---------~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~ 241 (251)
+||...|+.+.. .++++.+.+||+||+..+|. .+.++|++..+++.+.+++||||||||||+|+++
T Consensus 180 ~rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ 254 (307)
T 2p8e_A 180 ERIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNE 254 (307)
T ss_dssp HHHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred HHHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHH
Confidence 999999998773 57788889999999998873 4789999999999983358999999999999998
Q ss_pred HHHHHH
Q 025554 242 LNFLSL 247 (251)
Q Consensus 242 ~~~~~~ 247 (251)
+....+
T Consensus 255 ei~~~v 260 (307)
T 2p8e_A 255 ELCEYV 260 (307)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776554
No 2
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=5.1e-41 Score=291.53 Aligned_cols=211 Identities=31% Similarity=0.475 Sum_probs=177.7
Q ss_pred CCCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccC-CCCHHHHHHHHH
Q 025554 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-WVDPQRSISKAY 107 (251)
Q Consensus 29 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~-~~~~~~~l~~~~ 107 (251)
...+++|+.+++|.|. .|||++++..... .+..+|+|||||||+.+++++++.+.+.+.+.... ..++.++|+++|
T Consensus 20 ~~~~~~~~~s~~G~R~-~nED~~~~~~~~~--~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~ 96 (304)
T 2i0o_A 20 NEFLASGSSSMQGWRI-SQEDAHNCILNFD--DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAF 96 (304)
T ss_dssp CSSEEEEEEEEEESSS-CCCEEEEEEEEEE--TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHH
T ss_pred CCceEEEEeecCCCCC-CccCEEEEEeccC--CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHH
Confidence 3589999999999987 8999997654332 35689999999999999999999999888665322 346789999999
Q ss_pred HHHHHHHHhcc----------------CCCCCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCCC--ch
Q 025554 108 EKTDQAILSHS----------------SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TE 169 (251)
Q Consensus 108 ~~~~~~l~~~~----------------~~~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~--~e 169 (251)
..+|+.+.+.. ......+|||++++++.+++++++||||||+|++|+|++++||+||++. .|
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e 176 (304)
T 2i0o_A 97 LGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVE 176 (304)
T ss_dssp HHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred HHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHH
Confidence 99999886531 2224668899999999999999999999999999999999999999998 78
Q ss_pred HHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCC---------CceecceEEEEEecCCCe-EEEEEcCCCCCCCC
Q 025554 170 RGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS---------HLRSDPDIQNTILDGRSD-VLVLASDGLWKVSY 239 (251)
Q Consensus 170 ~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~---------~v~~~p~v~~~~l~~~~d-~lil~SDGl~d~l~ 239 (251)
++||...||.+.. ..++++.+.+||+||+..+|+ .|.++|++..+++.+ +| |||||||||||+|+
T Consensus 177 ~~rI~~~gg~v~~----~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~-~D~fllL~SDGl~d~l~ 251 (304)
T 2i0o_A 177 YQRIEKAGGRVTL----DGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGP-EDEFMVLACDGIWNFMT 251 (304)
T ss_dssp HHHHHHTTCCBCT----TSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCT-TEEEEEEECHHHHTTCC
T ss_pred HHHHHhCCCEEEe----CCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCC-CCeEEEEECcCccccCC
Confidence 9999999998863 246788889999999998874 467899999999998 65 57999999999999
Q ss_pred CHHHHHHH
Q 025554 240 FFLNFLSL 247 (251)
Q Consensus 240 ~~~~~~~~ 247 (251)
+++....+
T Consensus 252 ~~ei~~~v 259 (304)
T 2i0o_A 252 SEQVVQFV 259 (304)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98766544
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=3.3e-41 Score=296.63 Aligned_cols=212 Identities=29% Similarity=0.386 Sum_probs=180.4
Q ss_pred eEEEEeecCCCCCCCCceEEEEeeec------------------CCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhccc
Q 025554 33 KFGFSLVKGKANHPMEDYHVAKFVQL------------------QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE 94 (251)
Q Consensus 33 ~~~~~s~~G~~~~~neD~~~~~~~~~------------------~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~ 94 (251)
.||..+++|+|+ .|||++.+..... ...+..+|+|||||||+.+++++++.+...+.+...
T Consensus 15 ~~G~~s~~G~R~-~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~ 93 (337)
T 3qn1_B 15 LWGTVSIQGNRS-EMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIE 93 (337)
T ss_dssp CEEEEEECTTSS-SCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeCCc-hhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHH
Confidence 599999999999 8999998743311 112578999999999999999999999888765422
Q ss_pred C--------------CCCHHHHHHHHHHHHHHHHHhccC-------------CCCCCCcceEEEEEEeCCeEEEEEecCc
Q 025554 95 F--------------WVDPQRSISKAYEKTDQAILSHSS-------------DLGRGGSTAVTAILINGQRLWVANVGDS 147 (251)
Q Consensus 95 ~--------------~~~~~~~l~~~~~~~~~~l~~~~~-------------~~~~~~~tt~~~~~i~~~~l~ianvGDs 147 (251)
. ...+.++|+++|..+|+.+..... .....+|||++++++.++++|++|||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDS 173 (337)
T 3qn1_B 94 RIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDS 173 (337)
T ss_dssp HTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSC
T ss_pred hhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCc
Confidence 1 235688999999999999987541 1235689999999999999999999999
Q ss_pred eeEEeeCCceEecCCCCCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCe
Q 025554 148 RAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSD 225 (251)
Q Consensus 148 r~~l~r~g~~~~lt~dh~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d 225 (251)
|+|++|+|++++||+||++. .|+.||...||.+... ...+.++.+.+||+||+..+|+.+.++|++..+.+.+.+|
T Consensus 174 R~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~--~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d 251 (337)
T 3qn1_B 174 RAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQW--QGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDE 251 (337)
T ss_dssp EEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEES--SSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEE
T ss_pred EEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEec--CCceecCccccccccccccccCCCCCcceEEEEEeCCCCC
Confidence 99999999999999999998 8899999999988742 2247788889999999999999999999999999977799
Q ss_pred EEEEEcCCCCCCCCCHHHHHHH
Q 025554 226 VLVLASDGLWKVSYFFLNFLSL 247 (251)
Q Consensus 226 ~lil~SDGl~d~l~~~~~~~~~ 247 (251)
+||||||||||+|++++....+
T Consensus 252 ~llL~SDGl~d~l~~~ei~~~~ 273 (337)
T 3qn1_B 252 CLILASDGLWDVMNNQEVCEIA 273 (337)
T ss_dssp EEEEECHHHHTTSCHHHHHHHH
T ss_pred EEEEEecCcccCCCHHHHHHHH
Confidence 9999999999999998876654
No 4
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=284.29 Aligned_cols=215 Identities=30% Similarity=0.397 Sum_probs=177.2
Q ss_pred CCCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 025554 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYE 108 (251)
Q Consensus 29 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 108 (251)
...+.+|+.+++|+|+ .|||++++... ..+..+|+|||||||+.+++++++.+.+.+........++.+.|+++|.
T Consensus 5 ~~~~~~g~~s~~G~R~-~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~ 80 (274)
T 2iq1_A 5 ISLENVGCASQIGKRK-ENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFL 80 (274)
T ss_dssp CCGGGCEEEEECCSSS-SCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred ccCCeEEEEecccCCC-CccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 3567799999999977 89999976431 2457899999999999999999999888776654445678999999999
Q ss_pred HHHHHHHhccC----CCCCCCcceEEEEEEe-CCeEEEEEecCceeEEeeCCceEecCCCCCCC--chHHHHHHcCCeee
Q 025554 109 KTDQAILSHSS----DLGRGGSTAVTAILIN-GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVS 181 (251)
Q Consensus 109 ~~~~~l~~~~~----~~~~~~~tt~~~~~i~-~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~--~e~~ri~~~g~~~~ 181 (251)
.+|+.+.+... .....+|||++++++. +++++++||||||+|++|+|++++||+||++. .|+.||++.||.+.
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~ 160 (274)
T 2iq1_A 81 EIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVA 160 (274)
T ss_dssp HHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEE
Confidence 99999987532 1234567888777776 46899999999999999999999999999998 78999999998887
Q ss_pred cCCCCCCCcCCcccccccccCcCCCC-CceecceEEEEEecCC-CeEEEEEcCCCCCCCCCHHHHHHH
Q 025554 182 NMPGDVPRVNGQLAVSRAFGDKSLKS-HLRSDPDIQNTILDGR-SDVLVLASDGLWKVSYFFLNFLSL 247 (251)
Q Consensus 182 ~~~~~~~~~~~~~~ltr~lG~~~~k~-~v~~~p~v~~~~l~~~-~d~lil~SDGl~d~l~~~~~~~~~ 247 (251)
......++.++.+.+||+||+..+|+ ++.++|++..+++.+. +++||||||||||++++++....+
T Consensus 161 ~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~ 228 (274)
T 2iq1_A 161 WNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV 228 (274)
T ss_dssp ECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHH
T ss_pred cCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHH
Confidence 53322235677889999999999987 4789999999999973 369999999999999998766544
No 5
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=8.2e-41 Score=291.73 Aligned_cols=211 Identities=28% Similarity=0.409 Sum_probs=176.4
Q ss_pred CceEEEEeecCCCCCCCCceEEEEeee-------------cCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccC--
Q 025554 31 LVKFGFSLVKGKANHPMEDYHVAKFVQ-------------LQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-- 95 (251)
Q Consensus 31 ~~~~~~~s~~G~~~~~neD~~~~~~~~-------------~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~-- 95 (251)
-..||+.+++|+|+ .|||++.+.... ....+..+|+|||||||+.+++++++.+.+.+.+....
T Consensus 8 ~~~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~ 86 (316)
T 3kdj_B 8 VPLYGFTSICGRRP-EMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEK 86 (316)
T ss_dssp --CEEEEEECTTSS-SCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEeEeCCC-CCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhh
Confidence 46799999999998 899999863221 11235789999999999999999999998887654221
Q ss_pred ---------CCCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCC
Q 025554 96 ---------WVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (251)
Q Consensus 96 ---------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~ 166 (251)
...+.++|+++|..+|+.+.... ...+|||++++++.++++|++||||||+|++|+|++++||+||++
T Consensus 87 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~ 163 (316)
T 3kdj_B 87 PMLSDGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKP 163 (316)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCT
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCC
Confidence 12357889999999999886543 246889999999999999999999999999999999999999999
Q ss_pred C--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHH
Q 025554 167 N--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNF 244 (251)
Q Consensus 167 ~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~ 244 (251)
. .|++||...||.+... ...+.++.+.+||+||+..+|+.+.++|++..+.+.+.+|+||||||||||+|++++..
T Consensus 164 ~~~~e~~ri~~~~g~v~~~--~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~ 241 (316)
T 3kdj_B 164 DREDEAARIEAAGGKVIQW--NGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEAC 241 (316)
T ss_dssp TSHHHHHHHHHTTCCEEES--SSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHH
T ss_pred CCHHHHHHHHHcCCeEEec--CCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHH
Confidence 8 8899999999988742 22478888999999999999999999999999995555999999999999999998876
Q ss_pred HHH
Q 025554 245 LSL 247 (251)
Q Consensus 245 ~~~ 247 (251)
..+
T Consensus 242 ~~~ 244 (316)
T 3kdj_B 242 EMA 244 (316)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 6
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=1.7e-40 Score=296.23 Aligned_cols=212 Identities=29% Similarity=0.451 Sum_probs=178.5
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecC-CCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccC--------CCCHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF--------WVDPQ 100 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~--------~~~~~ 100 (251)
..++||+++++|.|. .|||++++...... ..+..+|+|||||||+.+|+++++.+++.+.....+ ...+.
T Consensus 20 ~~l~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~ 98 (382)
T 1a6q_A 20 NGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK 98 (382)
T ss_dssp TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred CceEEEEEecCCCCC-CCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHH
Confidence 579999999999987 89999987554322 235689999999999999999999999888653211 12457
Q ss_pred HHHHHHHHHHHHHHHhcc--CCCCCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCCC--chHHHHHHc
Q 025554 101 RSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDK 176 (251)
Q Consensus 101 ~~l~~~~~~~~~~l~~~~--~~~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~--~e~~ri~~~ 176 (251)
++|+++|..+|+.|.+.. ......+|||++++++.++++|++||||||+|++|+|++++||+||++. .|++||...
T Consensus 99 ~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~ 178 (382)
T 1a6q_A 99 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhc
Confidence 889999999999998753 2223567899999999999999999999999999999999999999998 789999999
Q ss_pred CCeeecCCCCCCCcCCcccccccccCcCCCC---------CceecceEEEEEec-CCCeEEEEEcCCCCCCCCCHHHHHH
Q 025554 177 GGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS---------HLRSDPDIQNTILD-GRSDVLVLASDGLWKVSYFFLNFLS 246 (251)
Q Consensus 177 g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~---------~v~~~p~v~~~~l~-~~~d~lil~SDGl~d~l~~~~~~~~ 246 (251)
||.+.. .++++.+.+||+||+..+|. .|.++|++..+++. +.+++||||||||||+|++++....
T Consensus 179 gg~v~~-----~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~ 253 (382)
T 1a6q_A 179 GGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF 253 (382)
T ss_dssp TCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred CcEEec-----ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHH
Confidence 998873 57788899999999998873 46899999999998 6568999999999999999876654
Q ss_pred H
Q 025554 247 L 247 (251)
Q Consensus 247 ~ 247 (251)
+
T Consensus 254 v 254 (382)
T 1a6q_A 254 V 254 (382)
T ss_dssp H
T ss_pred H
Confidence 4
No 7
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=3.1e-40 Score=295.56 Aligned_cols=233 Identities=29% Similarity=0.381 Sum_probs=180.7
Q ss_pred ccccccCcCCC--CCCCCCCCCCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHH
Q 025554 11 YSKLVGGRSSS--TGKGRSNVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSN 88 (251)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~ 88 (251)
+.+|.+|.... -+...+....+.+|+.+++|+|+ .|||++++... ..+..+|+|||||||+.+++++++.+.+.
T Consensus 99 ~~~q~gg~n~~~~~g~p~p~~~~~~~g~~s~~G~R~-~NED~~~~~~~---~~~~~l~~VaDG~GG~~~g~~as~~~~~~ 174 (389)
T 4da1_A 99 HREQIGGENLYFQAGKPIPKISLENVGCASQIGKRK-ENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKC 174 (389)
T ss_dssp --------------------CCGGGCEEEEECTTSS-SCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHH
T ss_pred eeccccccccceeEcCcCCcccceeEEEecCCCCCC-CCcceeeeeec---CCCEEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 45666666522 23333445578899999999977 89999976332 24578999999999999999999999988
Q ss_pred HHhcccCCCCHHHHHHHHHHHHHHHHHhccCC----CCCCCcceEEEEEEeCC-eEEEEEecCceeEEeeCCceEecCCC
Q 025554 89 ILKEEEFWVDPQRSISKAYEKTDQAILSHSSD----LGRGGSTAVTAILINGQ-RLWVANVGDSRAVLSTAGVAVQMTTD 163 (251)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~----~~~~~~tt~~~~~i~~~-~l~ianvGDsr~~l~r~g~~~~lt~d 163 (251)
+.........+.++|+.+|..+|+.+...... ....+|||++++++.++ +++++||||||+|++|+|++++||+|
T Consensus 175 l~~~~~~~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~D 254 (389)
T 4da1_A 175 IMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTID 254 (389)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCC
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCC
Confidence 87766556788999999999999999874321 13456777777776655 99999999999999999999999999
Q ss_pred CCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCCC-ceecceEEEEEecCC-CeEEEEEcCCCCCCCC
Q 025554 164 HEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSH-LRSDPDIQNTILDGR-SDVLVLASDGLWKVSY 239 (251)
Q Consensus 164 h~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~-v~~~p~v~~~~l~~~-~d~lil~SDGl~d~l~ 239 (251)
|++. .|++||.+.||.+.......++.++.+.+||+||+..+|+. +.++|++..+++... +++||||||||||+|+
T Consensus 255 Hs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~ 334 (389)
T 4da1_A 255 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVN 334 (389)
T ss_dssp CCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCC
T ss_pred CCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCC
Confidence 9998 68999999999988655556788888999999999998874 789999999999863 6899999999999999
Q ss_pred CHHHHHHH
Q 025554 240 FFLNFLSL 247 (251)
Q Consensus 240 ~~~~~~~~ 247 (251)
+++....+
T Consensus 335 ~~ei~~il 342 (389)
T 4da1_A 335 SQEICDFV 342 (389)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98776654
No 8
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=8.5e-40 Score=290.16 Aligned_cols=202 Identities=31% Similarity=0.406 Sum_probs=166.7
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 109 (251)
..+.++..+++|+|+ .|||++++........+..+|+|||||||..+|+++++.+.+.+.+... ...+.|+++|..
T Consensus 11 ~~~~~~~~s~~G~R~-~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~---~~~~~l~~a~~~ 86 (364)
T 2isn_A 11 WYTTTVAATMLGRRP-TDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSE---FTFAEVKKACLS 86 (364)
T ss_dssp TTEEEEEEEECTTSS-SCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSS---CCHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCC-cCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhc---ccHHHHHHHHHH
Confidence 447899999999977 9999998754333345678999999999999999999999988865332 346789999999
Q ss_pred HHHHHHhccCCCCCCCcceEEEEEEeC-----------------------------------------------------
Q 025554 110 TDQAILSHSSDLGRGGSTAVTAILING----------------------------------------------------- 136 (251)
Q Consensus 110 ~~~~l~~~~~~~~~~~~tt~~~~~i~~----------------------------------------------------- 136 (251)
+|+.+.+..... ..+|||++++++.+
T Consensus 87 ~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (364)
T 2isn_A 87 LDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQ 165 (364)
T ss_dssp HHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEE
T ss_pred HHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccccccccc
Confidence 999997754433 45667777666531
Q ss_pred -------CeEEEEEecCceeEEe-eCCceEecCCCCCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCC
Q 025554 137 -------QRLWVANVGDSRAVLS-TAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLK 206 (251)
Q Consensus 137 -------~~l~ianvGDsr~~l~-r~g~~~~lt~dh~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k 206 (251)
.++|++||||||+|++ |+|++++||+||++. .|++||.++||.+.. ..+|++++.+.+||+||+..+|
T Consensus 166 ~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~--~~~~rv~g~l~ltRalGd~~~k 243 (364)
T 2isn_A 166 KTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVET--FDVPRVDGVLALSRAFGDSDFK 243 (364)
T ss_dssp EEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEE--SSSEEETTTBSCSBCEECGGGS
T ss_pred cccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEec--CCCcccCCceeeEEEecchhhc
Confidence 3899999999999999 689999999999998 678999999998874 3457778888999999999887
Q ss_pred ---------CCceecceEEEEEecCCCeEEEEEcCCCCCCCC
Q 025554 207 ---------SHLRSDPDIQNTILDGRSDVLVLASDGLWKVSY 239 (251)
Q Consensus 207 ---------~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~ 239 (251)
+.|+++|++..+++.+ +|+||||||||||+++
T Consensus 244 ~~~~l~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~l~ 284 (364)
T 2isn_A 244 MNPNLPPEEQKVIAVPDVRQFYALS-SDLLLLACDGVYEPSG 284 (364)
T ss_dssp CCCSSCGGGSSSBCCCEEEEEEECT-TCEEEEECHHHHCSSS
T ss_pred cccccCcccCceEEEeEEEEEECCC-CCEEEEEcCCCCCCCC
Confidence 3577999999999998 8899999999999986
No 9
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=3.1e-39 Score=287.55 Aligned_cols=208 Identities=19% Similarity=0.309 Sum_probs=171.0
Q ss_pred CCCceEEEEeecCCCCCCC-----CceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHH
Q 025554 29 VGLVKFGFSLVKGKANHPM-----EDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSI 103 (251)
Q Consensus 29 ~~~~~~~~~s~~G~~~~~n-----eD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l 103 (251)
...+.++.++++|+|+ .| ||++++........+..+|+|||||||+.+|+++++.+.+.+.+.. ..+.++|
T Consensus 10 ~~~~~~~~~s~~G~R~-~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al 85 (377)
T 3d8k_A 10 EGRTVCASATSRNRRP-TSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEI 85 (377)
T ss_dssp HHHHHHHHTTTCEEEE-EECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHH
T ss_pred CCcEEEEEEEccCCCC-ccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHH
Confidence 3457788899999987 55 5566554333345668899999999999999999999999886532 3468899
Q ss_pred HHHHHHHHHHHHhccCCCCCCCcceEEEEEEe------------------------------------------------
Q 025554 104 SKAYEKTDQAILSHSSDLGRGGSTAVTAILIN------------------------------------------------ 135 (251)
Q Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~------------------------------------------------ 135 (251)
+++|..+|+.+.+... .+|||++++++.
T Consensus 86 ~~af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~ 161 (377)
T 3d8k_A 86 TRQFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRA 161 (377)
T ss_dssp HHHHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999999988653 356666665553
Q ss_pred ---CCeEEEEEecCceeEEeeCCceEecCCCCCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCC----
Q 025554 136 ---GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLK---- 206 (251)
Q Consensus 136 ---~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k---- 206 (251)
++++|++||||||+|++|+|++++||+||++. .|++||.++||.+... ....+++|.+.+||+||+..+|
T Consensus 162 ~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~-~g~~rv~G~l~vtRalGd~~~k~~~~ 240 (377)
T 3d8k_A 162 AKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTV-NGELLLGGVVPMTRAFGSFDFKKGGQ 240 (377)
T ss_dssp TTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEEC-SSSEEETTTBSCSBCSSCGGGSCC--
T ss_pred ccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEec-CCcEEEcCceecceeecChhhhcccc
Confidence 14899999999999999999999999999998 6999999999988632 2223778889999999999988
Q ss_pred -----CCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHHHH
Q 025554 207 -----SHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNFLS 246 (251)
Q Consensus 207 -----~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~~~ 246 (251)
+.++++|++..+++.+ +|+||||||||||+|++++++..
T Consensus 241 ~~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~ls~~e~v~~ 284 (377)
T 3d8k_A 241 GKLQQDLVSAVPDVTTFFAYP-GDDIVAGTAGAFAHFRSHAAIAA 284 (377)
T ss_dssp -CCSSCSSBCCCEEEEEEECT-TCEEEEECGGGGCSCSSHHHHHH
T ss_pred cccccCccccCCcEEEEEcCC-CCEEEEEECCcccCCCcHHHHHH
Confidence 4688999999999998 89999999999999999876543
No 10
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-38 Score=278.86 Aligned_cols=214 Identities=17% Similarity=0.280 Sum_probs=168.4
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeec-CCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccC-------------
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQL-QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF------------- 95 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~-~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~------------- 95 (251)
..+.+|+.+++|+|+ .|||++++..... ...+..+|+|||||||+.+++++++.+.+.+.+....
T Consensus 20 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (324)
T 2i44_A 20 PAFDAAIFTDIGGRK-HQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPA 98 (324)
T ss_dssp TTEEEEEEEECTTSS-SCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCH
T ss_pred cceEEEEEECCCCCC-ccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCc
Confidence 578899999999976 9999998653221 2456789999999999999999999998888653111
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHhccC---CCCCCCcceEEEEEEeCCeEEEEEecCceeEEeeC---C-ceEecC
Q 025554 96 -------WVDPQRSISKAYEKTDQAILSHSS---DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTA---G-VAVQMT 161 (251)
Q Consensus 96 -------~~~~~~~l~~~~~~~~~~l~~~~~---~~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~---g-~~~~lt 161 (251)
...+.++|+++|..+|+.+.+... ....+++||+++ +.++++|++||||||+|++|+ | ++++||
T Consensus 99 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~--i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT 176 (324)
T 2i44_A 99 TEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAV--LAKGFVAVGHLGDSRIAMGVETPNGLNCEFLT 176 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEE--EETTEEEEEEESSCEEEEEEEETTEEEEEESC
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE--EECCeEEEEEccCceEEEEeccCCCceEEECC
Confidence 124578899999999999987532 112334444433 679999999999999999996 7 899999
Q ss_pred CCCCCC--chHHHHHHcCCeeecCCCC---CCCcCCcccccccccC----cCCC----------CCceecceEEEEEecC
Q 025554 162 TDHEPN--TERGSIEDKGGFVSNMPGD---VPRVNGQLAVSRAFGD----KSLK----------SHLRSDPDIQNTILDG 222 (251)
Q Consensus 162 ~dh~~~--~e~~ri~~~g~~~~~~~~~---~~~~~~~~~ltr~lG~----~~~k----------~~v~~~p~v~~~~l~~ 222 (251)
+||++. .|++||.+.||.+...... ..+..|.+.++|++|+ ..+| ++|.++|++..+++.+
T Consensus 177 ~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~ 256 (324)
T 2i44_A 177 VDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTP 256 (324)
T ss_dssp CCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCT
T ss_pred CCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCC
Confidence 999998 8999999999998532111 1135677899999999 4443 3568999999999998
Q ss_pred CCe-EEEEEcCCCCCCCCCHHHHHHH
Q 025554 223 RSD-VLVLASDGLWKVSYFFLNFLSL 247 (251)
Q Consensus 223 ~~d-~lil~SDGl~d~l~~~~~~~~~ 247 (251)
+| +||||||||||+|++++....+
T Consensus 257 -~d~~llLaSDGl~d~ls~~ei~~~v 281 (324)
T 2i44_A 257 -QHRVMILATDGLWDVMSAAQAVEIA 281 (324)
T ss_dssp -TEEEEEEECHHHHTTCCHHHHHHHH
T ss_pred -CCeEEEEEcCchhccCCHHHHHHHH
Confidence 76 9999999999999998776554
No 11
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.7e-39 Score=291.72 Aligned_cols=220 Identities=21% Similarity=0.292 Sum_probs=175.1
Q ss_pred CCCCCCCCCceEEEEeecCCCCC-------CCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhccc-
Q 025554 23 GKGRSNVGLVKFGFSLVKGKANH-------PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE- 94 (251)
Q Consensus 23 ~~~~~~~~~~~~~~~s~~G~~~~-------~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~- 94 (251)
...-.....+.+|+++.+|.|.. .|||++++.. ...+..||+|||||||+.+|+++++.++..+.....
T Consensus 18 ~~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~ 94 (401)
T 2j4o_A 18 TDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLN 94 (401)
T ss_dssp TTTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCC
T ss_pred cccccccccCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 33333455788999999999984 5999997643 234578999999999999999999999988864311
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHhccC------------------------------------CCCCCCcceEEEEEEe
Q 025554 95 ---FWVDPQRSISKAYEKTDQAILSHSS------------------------------------DLGRGGSTAVTAILIN 135 (251)
Q Consensus 95 ---~~~~~~~~l~~~~~~~~~~l~~~~~------------------------------------~~~~~~~tt~~~~~i~ 135 (251)
...++.++|+++|..+|+.+.+... .....+|||++++++.
T Consensus 95 ~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~ 174 (401)
T 2j4o_A 95 AEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLL 174 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEE
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEE
Confidence 1235788999999999988765310 0123578999999999
Q ss_pred CCeEEEEEecCceeEEeeCC----ceEecCCCCCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCC---
Q 025554 136 GQRLWVANVGDSRAVLSTAG----VAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLK--- 206 (251)
Q Consensus 136 ~~~l~ianvGDsr~~l~r~g----~~~~lt~dh~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k--- 206 (251)
++++|+|||||||+|++|++ ++++||+||++. .|++||.+.|+.+... ...++++.+.+||+||+..+|
T Consensus 175 ~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--~~~r~~g~l~vtRalGd~~~k~~~ 252 (401)
T 2j4o_A 175 NNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKI--KQVGIICGQESTRRIGDYKVKYGY 252 (401)
T ss_dssp TTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHH--HHHCCBTTBCCSBCEECHHHHHSG
T ss_pred CCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeec--cCccccCCcccccccCCHhhcccc
Confidence 99999999999999999988 999999999998 7899999999875311 123777888999999998766
Q ss_pred -----------CCceecceEEE-EEecCCCeEEEEEcCCCCCCC--------CCHHHHHHH
Q 025554 207 -----------SHLRSDPDIQN-TILDGRSDVLVLASDGLWKVS--------YFFLNFLSL 247 (251)
Q Consensus 207 -----------~~v~~~p~v~~-~~l~~~~d~lil~SDGl~d~l--------~~~~~~~~~ 247 (251)
++++++|++.. +++.+.++|||||||||||+| ++++....+
T Consensus 253 ~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v 313 (401)
T 2j4o_A 253 TDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMI 313 (401)
T ss_dssp GGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHH
Confidence 47889999996 999985568999999999999 566555443
No 12
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=4e-39 Score=285.55 Aligned_cols=194 Identities=19% Similarity=0.248 Sum_probs=161.0
Q ss_pred EeecCCCCC--CCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcc----cCCCCHHHHHHHHHHHH
Q 025554 37 SLVKGKANH--PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEE----EFWVDPQRSISKAYEKT 110 (251)
Q Consensus 37 ~s~~G~~~~--~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~----~~~~~~~~~l~~~~~~~ 110 (251)
++.+|.|+. .|||++++.. .+.+..+|+|||||||+.+|+++++.+.+.+.... ....++.++|+++|..+
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 667999873 5999997643 33557899999999999999999999999886521 12235688999999999
Q ss_pred HHHHHhccC-------------------------------------CCCCCCcceEEEEEEeCCeEEEEEecCceeEEee
Q 025554 111 DQAILSHSS-------------------------------------DLGRGGSTAVTAILINGQRLWVANVGDSRAVLST 153 (251)
Q Consensus 111 ~~~l~~~~~-------------------------------------~~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r 153 (251)
|+.+.+... .....+|||++++++.++++|+|||||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 999876320 0124689999999999999999999999999999
Q ss_pred C---C--ceEecCCCCCCC--chHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCC--------------Cceec
Q 025554 154 A---G--VAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKS--------------HLRSD 212 (251)
Q Consensus 154 ~---g--~~~~lt~dh~~~--~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~--------------~v~~~ 212 (251)
+ | ++++||+||++. .|++||.+.||.+.. .+.++.+ +||+||+..+|+ +++++
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~-----~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~~ 255 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN-----FEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIFE 255 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG-----GTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBCC
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec-----cCcCCEE-cccCCcCHHHhccccccccccccCCCCEecc
Confidence 8 8 999999999998 689999999998864 3555655 999999987763 68899
Q ss_pred ceEEE-EEecCCCeEEEEEcCCCCCCCC
Q 025554 213 PDIQN-TILDGRSDVLVLASDGLWKVSY 239 (251)
Q Consensus 213 p~v~~-~~l~~~~d~lil~SDGl~d~l~ 239 (251)
|++.. +++.+.++|||||||||||+|+
T Consensus 256 Pdi~~~~~l~~~d~fllL~SDGl~d~l~ 283 (358)
T 2irm_A 256 PEIVGGIQITPACRFLVLMSSGLCRALH 283 (358)
T ss_dssp CEEEEEEECCTTEEEEEEECHHHHHHHH
T ss_pred CeEEEEEEeCCCCcEEEEECCCcccCcc
Confidence 99995 9999855679999999999998
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=2e-38 Score=289.13 Aligned_cols=215 Identities=27% Similarity=0.331 Sum_probs=170.5
Q ss_pred CceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhc---------c--------
Q 025554 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE---------E-------- 93 (251)
Q Consensus 31 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~---------~-------- 93 (251)
....+|.+++|..+..|||++.+..... .+..+|+|||||||+.+|+++++.++..+... .
T Consensus 36 ~~v~~~~s~~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~ 113 (467)
T 2pnq_A 36 SSILGFDSNRLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGR 113 (467)
T ss_dssp CSEEEEEEEEECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC---
T ss_pred cceEEEEeeccCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccc
Confidence 3456667888887779999997644322 24579999999999999999999998877532 0
Q ss_pred -------------c-----------------------------CCCCHHHHHHHHHHHHHHHHHhccCC-----------
Q 025554 94 -------------E-----------------------------FWVDPQRSISKAYEKTDQAILSHSSD----------- 120 (251)
Q Consensus 94 -------------~-----------------------------~~~~~~~~l~~~~~~~~~~l~~~~~~----------- 120 (251)
+ ....+.++|+++|..+|+.|......
T Consensus 114 ~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~ 193 (467)
T 2pnq_A 114 ALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLV 193 (467)
T ss_dssp -CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHH
T ss_pred cccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 0 01167889999999999999764321
Q ss_pred -CCCCCcceEEEEEEeCCeEEEEEecCceeEEee---CC--ceEecCCCCCCC--chHHHHHHcCCeeecC-CCCCCCcC
Q 025554 121 -LGRGGSTAVTAILINGQRLWVANVGDSRAVLST---AG--VAVQMTTDHEPN--TERGSIEDKGGFVSNM-PGDVPRVN 191 (251)
Q Consensus 121 -~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r---~g--~~~~lt~dh~~~--~e~~ri~~~g~~~~~~-~~~~~~~~ 191 (251)
....+|||++++++.++.+|+|||||||+|++| +| ++++||.||++. .|++||.+.|+..... ....++++
T Consensus 194 ~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~ 273 (467)
T 2pnq_A 194 LRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLL 273 (467)
T ss_dssp HHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBT
T ss_pred ccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccc
Confidence 124578888999999999999999999999998 47 799999999998 7899999998543210 01235888
Q ss_pred CcccccccccCcCCC---------------------------------CCceecceEEEEEecCCCeEEEEEcCCCCCCC
Q 025554 192 GQLAVSRAFGDKSLK---------------------------------SHLRSDPDIQNTILDGRSDVLVLASDGLWKVS 238 (251)
Q Consensus 192 ~~~~ltr~lG~~~~k---------------------------------~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l 238 (251)
|.+.+||+||+..+| |+++++|++..+++.+.+.|||||||||||+|
T Consensus 274 G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~l 353 (467)
T 2pnq_A 274 GLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETM 353 (467)
T ss_dssp TTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTS
T ss_pred cccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccC
Confidence 889999999999776 34789999999999994458889999999999
Q ss_pred CCHHHHHHH
Q 025554 239 YFFLNFLSL 247 (251)
Q Consensus 239 ~~~~~~~~~ 247 (251)
++++++..+
T Consensus 354 s~~eiv~iv 362 (467)
T 2pnq_A 354 HRQDVVRIV 362 (467)
T ss_dssp CHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 999887665
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=5.6e-36 Score=252.43 Aligned_cols=202 Identities=19% Similarity=0.242 Sum_probs=159.8
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcc-c--C--CCCHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEE-E--F--WVDPQRSIS 104 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~-~--~--~~~~~~~l~ 104 (251)
..|.+++.+++|+.++.|||++++.... .+..+|+|||||||+.+++++++.+.+.+.+.. . . ...+.+.|+
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 80 (250)
T 2pk0_A 4 KYMEISLLTDIGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWML 80 (250)
T ss_dssp CCEEEEEEEECCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH
T ss_pred ceEEEEEecCCCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHH
Confidence 4689999999999444999999764432 245899999999999888888888777765221 1 1 234678899
Q ss_pred HHHHHHHHHHHhccCCC-CCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecC
Q 025554 105 KAYEKTDQAILSHSSDL-GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNM 183 (251)
Q Consensus 105 ~~~~~~~~~l~~~~~~~-~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~ 183 (251)
++|..+|+.+.+..... ...++||++++++.+++++++|+||||+|++|+|++++||.||++. .++.+.|......
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~---~~~~~~g~i~~~~ 157 (250)
T 2pk0_A 81 VSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLV---NELVKAGQLTEEE 157 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHH---HHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHH---HHHHHcCCCCHHH
Confidence 99999999998754322 3567899999999999999999999999999999999999999874 3355556544432
Q ss_pred CCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHHHH
Q 025554 184 PGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNFLS 246 (251)
Q Consensus 184 ~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~~~ 246 (251)
...+|..+ .+||+||+.. .++|++..+++.+ +|+||||||||||++++++....
T Consensus 158 ~~~~~~~~---~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~ 211 (250)
T 2pk0_A 158 AASHPQKN---IITQSIGQAN-----PVEPDLGVHLLEE-GDYLVVNSDGLTNMLSNADIATV 211 (250)
T ss_dssp HHTCCSCC---CBSCCBSCSS-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHH
T ss_pred HHhCCCcc---eEEeecCCCC-----CccceEEEEEcCC-CCEEEEECCCCCCCcCHHHHHHH
Confidence 23344444 9999999988 7899999999998 89999999999999998765443
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=3.3e-35 Score=246.13 Aligned_cols=198 Identities=23% Similarity=0.220 Sum_probs=143.9
Q ss_pred ceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhccc----C-CCCHHHHHHHH
Q 025554 32 VKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE----F-WVDPQRSISKA 106 (251)
Q Consensus 32 ~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~----~-~~~~~~~l~~~ 106 (251)
|++++.+++|+.++.|||++ +... . ... +|+|||||||+.+++++++.+.+.+.+... . ...+.+.|+++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~-~--~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE-K--HQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT-T--TCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC-C--CCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 57999999999444999999 5322 1 234 999999999997777776666555533211 1 45778899999
Q ss_pred HHHHHHHHHhccCCC--CCCCcceEEEEEEe--CCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeec
Q 025554 107 YEKTDQAILSHSSDL--GRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSN 182 (251)
Q Consensus 107 ~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~--~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~ 182 (251)
|..+|+.+.+..... ...++||++++++. +++++++|+||||+|++|++++++||.||++. +++.+.|+....
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~---~~~~~~g~i~~~ 152 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWI---AQAVQLGSLTIE 152 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHH---HHC---------
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHH---HHHHHcCCCCHH
Confidence 999999998865432 34568999999998 89999999999999999999999999999874 334455554444
Q ss_pred CCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHHHH
Q 025554 183 MPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNFLS 246 (251)
Q Consensus 183 ~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~~~ 246 (251)
....+|..+ .+||+||+.. ..+|++..+++.+ +|+||||||||||+++++.....
T Consensus 153 ~~~~~~~~~---~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~ 207 (240)
T 2j82_A 153 QARQHPWRH---VLSQCLGRED-----LSQIDIQPIDLEP-GDRLLLCSDGLTEELTDDVISIY 207 (240)
T ss_dssp -------CC---CBSCCBSCTT-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHH
T ss_pred HHhcCCCcC---eEeecCCCCC-----ceeEEEEEEeeCC-CCEEEEECCCCCCCCCHHHHHHH
Confidence 334445544 9999999987 7899999999998 89999999999999998765443
No 16
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=3.1e-35 Score=246.02 Aligned_cols=197 Identities=22% Similarity=0.236 Sum_probs=158.2
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhccc--CCCCHHHHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE--FWVDPQRSISKAY 107 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~--~~~~~~~~l~~~~ 107 (251)
-.+.++..+++|+.+..|||++++ +..+|+|||||||+.+++++++.+.+.+.+... ...++.+.|+++|
T Consensus 3 ~~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~ 74 (237)
T 1txo_A 3 LVLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAV 74 (237)
T ss_dssp CEEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Confidence 457899999999844489999975 135999999999999999999999888865432 2247889999999
Q ss_pred HHHHHHHHhccCC--CCCCCcceEEEEEEeCCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecCCC
Q 025554 108 EKTDQAILSHSSD--LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPG 185 (251)
Q Consensus 108 ~~~~~~l~~~~~~--~~~~~~tt~~~~~i~~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~~~ 185 (251)
..+|+.+.+.... ....+|||++++++.+++++++|+||||+|++|+|++++||.||++ .+++.+.|........
T Consensus 75 ~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~---~~~~~~~G~i~~~~~~ 151 (237)
T 1txo_A 75 RAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTF---VQTLVDEGRITPEEAH 151 (237)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBH---HHHHHHTTSSCTTGGG
T ss_pred HHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCH---HHHHHHcCCCCHHHHh
Confidence 9999999875322 1345788899999999999999999999999999999999999986 3456666654444333
Q ss_pred CCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHHHHH
Q 025554 186 DVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNFLSL 247 (251)
Q Consensus 186 ~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~~~~ 247 (251)
.+|..+ .+||++|+. ..+|++..+++.+ +|+||||||||||++++++....+
T Consensus 152 ~~~~~~---~~tr~lg~~------~~~p~~~~~~l~~-~d~lvl~SDGl~d~l~~~~i~~~~ 203 (237)
T 1txo_A 152 SHPQRS---LIMRALTGH------EVEPTLTMREARA-GDRYLLCSDGLSDPVSDETILEAL 203 (237)
T ss_dssp GCTTTT---CBCCCBSSS------CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHH
T ss_pred hCcccc---ceeeccCCC------CccceEEEEecCC-CCEEEEECCCCCCCCCHHHHHHHH
Confidence 445544 899999964 4789999999998 899999999999999987655443
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.5e-34 Score=241.43 Aligned_cols=193 Identities=21% Similarity=0.229 Sum_probs=155.3
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCCh--HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGE--TVPAYLQKHLFSNILKEEEFWVDPQRSISKAY 107 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~--~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 107 (251)
..+.+++.+++|+.++.|||++++ +..+|+|||||||+ .+|+++.+.+.+.+... .+ .+.|+++|
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~~-~~~l~~~~ 70 (234)
T 2jfr_A 4 SVLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA----PD-RDGLLEAV 70 (234)
T ss_dssp SEEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----CS-HHHHHHHH
T ss_pred eeEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----Cc-HHHHHHHH
Confidence 468999999999944499999964 23599999999977 78888888777665443 12 78899999
Q ss_pred HHHHHHHHhccCCCCCCCcceEEEEEEeCCe---EEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecCC
Q 025554 108 EKTDQAILSHSSDLGRGGSTAVTAILINGQR---LWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMP 184 (251)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~---l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~~ 184 (251)
..+|+.+.+........++||++++++.+++ ++++|+||||+|++|++++++||+||++. .++.+.|.......
T Consensus 71 ~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~---~~~~~~g~i~~~~~ 147 (234)
T 2jfr_A 71 QQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVA---GELVRMGEITRHEA 147 (234)
T ss_dssp HHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHH---HHHHHTTSSCHHHH
T ss_pred HHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHH---HHHHHcCCCCHHHH
Confidence 9999999886543322278888888888888 99999999999999999999999999874 34666665554444
Q ss_pred CCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCHHHHHHH
Q 025554 185 GDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFFLNFLSL 247 (251)
Q Consensus 185 ~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~~~~~~~ 247 (251)
..+|..+ .+||+||+.. ..+|++..+++.+ +|+||||||||||++++++....+
T Consensus 148 ~~~~~~~---~~tralG~~~-----~~~~~~~~~~l~~-gd~lll~SDGl~d~~~~~~i~~~~ 201 (234)
T 2jfr_A 148 RWHPQRH---LLTRALGIGP-----HIGPDVFGIDCGP-GDRLLISSDGLFAAADEALIVDAA 201 (234)
T ss_dssp TTCTTTT---CBSCCBSSSS-----CCCCEEEECCCCT-TCEEEEECGGGGTTSCHHHHHHHH
T ss_pred hcCcccc---eeeecCcCCC-----CceeEEEEEecCC-CCEEEEECCCCccccCHHHHHHHH
Confidence 4445544 9999999987 7899999999998 899999999999999987655443
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.97 E-value=1.5e-30 Score=214.34 Aligned_cols=162 Identities=16% Similarity=0.130 Sum_probs=122.9
Q ss_pred CceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHhccC--CCCCCCcceEEEEEEe--C
Q 025554 61 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS--DLGRGGSTAVTAILIN--G 136 (251)
Q Consensus 61 ~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~i~--~ 136 (251)
++..+|+|||||||+.+++.+++.+.+.+.+.......+ ++++..+|+.+.+... .....+|||++++++. +
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~~----~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~ 83 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGSP----LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRD 83 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCCH----HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTT
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCC
Confidence 456899999999999777777777766665433222233 5777777777776432 2345688999999999 9
Q ss_pred CeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecCCCCCCCcCCcccccccccCcCCCCCceecceE-
Q 025554 137 QRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDI- 215 (251)
Q Consensus 137 ~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v- 215 (251)
++++++|+||||+|++|+|++++||+||++ .+++.+.|. .+ ..+|..+ .+||++|... ..+|++
T Consensus 84 ~~~~~anvGDSr~yl~r~g~~~~lt~dh~~---~~~~~~~g~-~~---~~~~~~~---~ltralG~~~-----~~~~~~~ 148 (211)
T 3rnr_A 84 GTLEWASVGDCRVYLFKGGRLSRLSLDHNV---SSEMVLLGR-GP---VPGPAGE---MITSFIGIEN-----LTEISTS 148 (211)
T ss_dssp TEEEEEEESSCEEEEEETTEEEECCCCCBH---HHHHHHTTS-CC---CCSHHHH---CBSCCBTCSS-----CCCCEEC
T ss_pred CEEEEEEEccCeEEEEeCCEEEEECCCcHH---HHHHHHcCC-Ch---hhCCCcc---EEecccCCCC-----CcceeEe
Confidence 999999999999999999999999999976 455677775 32 4445555 8999999887 678999
Q ss_pred -EEEEecCCCeEEEEEcCCCCCCCCCHH
Q 025554 216 -QNTILDGRSDVLVLASDGLWKVSYFFL 242 (251)
Q Consensus 216 -~~~~l~~~~d~lil~SDGl~d~l~~~~ 242 (251)
..+++.+ +|+||||||||||++++++
T Consensus 149 ~~~~~l~~-gd~llL~SDGl~d~~~~~~ 175 (211)
T 3rnr_A 149 EAPLPLEA-GEGVLVVSDGVYRSLHEDR 175 (211)
T ss_dssp SSCEECCT-TCEEEEEEC-----CCTTE
T ss_pred cceecCCC-CCEEEEEcCCCCCCcCHHH
Confidence 7889998 9999999999999998864
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.73 E-value=3.2e-17 Score=137.00 Aligned_cols=161 Identities=14% Similarity=0.131 Sum_probs=104.7
Q ss_pred CCCCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHH---HHHHHhcccCCCCHHHHHH
Q 025554 28 NVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHL---FSNILKEEEFWVDPQRSIS 104 (251)
Q Consensus 28 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l---~~~~~~~~~~~~~~~~~l~ 104 (251)
....+.+++++..-.....+.|.+.+.... ....+++|+||+|+...|+.++..+ +..+.... .+ +.
T Consensus 4 ~~~~i~~~~~~~~~p~~~v~GD~y~~~~~~---~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~---~~----~~ 73 (242)
T 3t91_A 4 MSYRVSTGAAHAAKGGGLVSGDSYSMMELG---ARKYAAAISDGMGNGARAHFESNETIKLLEKILESG---ID----EK 73 (242)
T ss_dssp CCCEEEEEEEEECTTSCSCCSCEEEEEEET---TTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---CC----HH
T ss_pred ceEEEEEEeehhcCCccccCCcEEEEEEeC---CCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---CC----HH
Confidence 345677888888766665899999653332 2356799999999664433332222 22222221 12 45
Q ss_pred HHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeec
Q 025554 105 KAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSN 182 (251)
Q Consensus 105 ~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~ 182 (251)
.++..+|+.+..... ..+.+|+++++++ +++++++|+||+|+|++|+|++.+++.++.
T Consensus 74 ~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~----------------- 133 (242)
T 3t91_A 74 IAIKTINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNL----------------- 133 (242)
T ss_dssp HHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC-------------------
T ss_pred HHHHHHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCc-----------------
Confidence 677788888866432 3456777777775 789999999999999999999999876553
Q ss_pred CCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCC
Q 025554 183 MPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYF 240 (251)
Q Consensus 183 ~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~ 240 (251)
.+|... ...++...+.+.+ ||.|+||||||||.++.
T Consensus 134 ----------------~lG~~~-----~~~~~~~~~~l~~-GD~lll~SDGl~e~~~~ 169 (242)
T 3t91_A 134 ----------------PIGIIN-----EFDVEVVSEQLKA-GDLLIMMSDGIFEGPKH 169 (242)
T ss_dssp -------------------CCC-----TTCEEEEEEECCT-TCEEEEECHHHHTCSTT
T ss_pred ----------------eeEecC-----CCcceEEEEEeCC-CCEEEEECCCcccCCCc
Confidence 234332 3456677788888 99999999999999974
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.68 E-value=2.8e-15 Score=125.42 Aligned_cols=161 Identities=11% Similarity=0.032 Sum_probs=113.9
Q ss_pred CceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Q 025554 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKT 110 (251)
Q Consensus 31 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 110 (251)
.+.+++++........+.|.+.+.... ....+++|+||+|+...|+.++..+...+......... +.+++..+
T Consensus 10 ~~~~~~~~~~~~~~~vgGD~y~~~~~~---~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l~~~ 82 (242)
T 3pu9_A 10 TIELAVAKTHKFGTRESGDTVELVERP---GGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAARAA 82 (242)
T ss_dssp EEEEEEEEECCTTCSSCSEEEEEEECT---TSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHHHHH
T ss_pred EEEEEEEecccCccccCCceEEEEEeC---CCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHH
Confidence 455667776655555788998653222 23467999999998877777766544443321111112 45677788
Q ss_pred HHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecCCCCCC
Q 025554 111 DQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVP 188 (251)
Q Consensus 111 ~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~~~~~~ 188 (251)
|+.+..... ....+|+++++++ .++++++|+||+++|++|+|++.+++.+|.
T Consensus 83 n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~----------------------- 136 (242)
T 3pu9_A 83 HDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGG----------------------- 136 (242)
T ss_dssp HHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCC-----------------------
T ss_pred HHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCc-----------------------
Confidence 888866542 2345777777775 679999999999999999999999998874
Q ss_pred CcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCC
Q 025554 189 RVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYF 240 (251)
Q Consensus 189 ~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~ 240 (251)
.+|... ..+++...+++.+ ||.|+|||||++|..+.
T Consensus 137 ----------~lG~~~-----~~~~~~~~~~l~~-Gd~lll~TDGl~e~~~~ 172 (242)
T 3pu9_A 137 ----------RIGIYR-----HTRPRVLEFPAEP-GLTVILVSDGIIGAGGR 172 (242)
T ss_dssp ----------CBSSCT-----TCCCEEEEEECCT-TCEEEEECHHHHTTTTT
T ss_pred ----------cccccC-----CCCceEEEEEeCC-CCEEEEECcCcccCCCC
Confidence 244333 3467778888998 99999999999998764
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.50 E-value=6.5e-13 Score=111.58 Aligned_cols=165 Identities=18% Similarity=0.082 Sum_probs=102.3
Q ss_pred CCCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHH---HHHHHHHhcccC-CCCHHHHHH
Q 025554 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQK---HLFSNILKEEEF-WVDPQRSIS 104 (251)
Q Consensus 29 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~---~l~~~~~~~~~~-~~~~~~~l~ 104 (251)
.+.+.+++....... ..-|.+-+... . ++..+++|+||+|+...|..++. .++..+...... .......+.
T Consensus 35 ~~~~~~~~~~~p~~~--vgGD~yd~~~~-~--~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~ 109 (255)
T 3f79_A 35 IEGLEFSHRIIPSLY--LSGDFVDYFRV-D--ERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPS 109 (255)
T ss_dssp ETTEEEEEEEECSSS--SCSEEEEEEEE-T--TTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHH
T ss_pred CCCEEEEEEEeEhhh--cCceEEeEEEe-C--CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHH
Confidence 345666666655532 57888743322 2 23578999999996655555443 334443332111 112233467
Q ss_pred HHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCc-eeEEeeCCceEecCCCCCCCchHHHHHHcCCeee
Q 025554 105 KAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDS-RAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVS 181 (251)
Q Consensus 105 ~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDs-r~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~ 181 (251)
.++..+|+.+.+. ..+..+|+++++++ .++++++|+|++ +.|++++|++.+++.+|.+
T Consensus 110 ~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~--------------- 170 (255)
T 3f79_A 110 EVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP--------------- 170 (255)
T ss_dssp HHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC-------------------
T ss_pred HHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce---------------
Confidence 7888899998753 24567888888884 679999999995 6899999999999887632
Q ss_pred cCCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCH
Q 025554 182 NMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFF 241 (251)
Q Consensus 182 ~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~ 241 (251)
+|... ...++...+++.+ ||.|+|||||++|.++.+
T Consensus 171 ------------------lG~~~-----~~~~~~~~~~l~~-gd~lll~TDGl~e~~~~~ 206 (255)
T 3f79_A 171 ------------------VGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPGA 206 (255)
T ss_dssp -------------------CCSS-----CCCCCC---BCCS-SEEEEEECSCCCCCSCC-
T ss_pred ------------------EEEcC-----CCceEEEEEEECC-CCEEEEECCCcCcccCCC
Confidence 34332 2344556667777 999999999999998764
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.49 E-value=4.4e-12 Score=102.33 Aligned_cols=156 Identities=11% Similarity=0.057 Sum_probs=107.7
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 109 (251)
..+.+|..+..-.....+-|.+.+.. . ++..+++|+||+|....|+.++..+...+.... ..++ .+.+..
T Consensus 2 ~~~~~~~~~~p~~~~~v~GD~y~~~~-~---~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~--~~~p----~~il~~ 71 (193)
T 3zt9_A 2 EKLEVGIYTRAREGEIACGDACLVKR-V---EGVIFLAVGDGIGHGPEAARAAEIAIASMESSM--NTGL----VNIFQL 71 (193)
T ss_dssp CCCCEEEEEECCTTCSSCSEEEEEEE-E---TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT--TSCH----HHHHHH
T ss_pred CccEEEEEEeccCCCCCCCCeEEEEE-e---CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc--cCCH----HHHHHH
Confidence 45778888887666657999997643 2 235899999999987777777766666665432 1233 455667
Q ss_pred HHHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCceeEEeeCCceEecCCCCCCCchHHHHHHcCCeeecCCCCC
Q 025554 110 TDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDV 187 (251)
Q Consensus 110 ~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDsr~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~~~~~~ 187 (251)
+|+.+... . ++|++++.++ .+++.++|+|+++.|++|+++..++...+.
T Consensus 72 ln~~l~~~------~-~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g---------------------- 122 (193)
T 3zt9_A 72 CHRELRGT------R-GAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPG---------------------- 122 (193)
T ss_dssp HHHHHTTS------S-CEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCC----------------------
T ss_pred HHHHHhcc------C-ceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCC----------------------
Confidence 78887542 2 3445555555 679999999999999999987665543221
Q ss_pred CCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCH
Q 025554 188 PRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFF 241 (251)
Q Consensus 188 ~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~ 241 (251)
.+|... ..+++...+++.+ ||.|+|+|||++|.++.+
T Consensus 123 -----------~lG~~~-----~~~~~~~~~~l~~-gd~l~l~sDGl~e~~~~~ 159 (193)
T 3zt9_A 123 -----------ILGYNY-----PHQLLIAKGSYQE-GDLFLIHSDGIQEGAVPL 159 (193)
T ss_dssp -----------BBTTBC-----CSSCCCEEEECCT-TCEEEEECTTSCTTCSCG
T ss_pred -----------ceeccC-----CccceeEEeccCC-CCEEEEECCCCCCccChh
Confidence 233222 1244556778888 999999999999998774
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.73 E-value=8.4e-07 Score=79.07 Aligned_cols=159 Identities=12% Similarity=0.064 Sum_probs=96.0
Q ss_pred CCCCceEEEEeecCCCC-CCCCceEEEEeeecCCCceEEEEEEcCCCChHHHHHHHH---HHHHHHHhcccCCCCHHHHH
Q 025554 28 NVGLVKFGFSLVKGKAN-HPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQK---HLFSNILKEEEFWVDPQRSI 103 (251)
Q Consensus 28 ~~~~~~~~~~s~~G~~~-~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~---~l~~~~~~~~~~~~~~~~~l 103 (251)
..+.+.++......... ...=|.+.+... ++ ..+++|+|++|-.-.|..++. .++..+... ..++.
T Consensus 32 ~~~~~~~~~~y~P~~~~~~vgGD~y~~~~~--~~--~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~---~~~p~--- 101 (399)
T 3ke6_A 32 VVPGADIAAEYLVAAEDTAAGGDWFDALAL--GD--RLVLVVGDVVGHGVEAAAVMSQLRTALRMQISA---GYTVV--- 101 (399)
T ss_dssp CBTTEEEEEEEECSSSSCSCCSEEEEEEEC--SS--EEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHT---TCCHH---
T ss_pred CCCCeEEEEEEEECCCCCCCCCceEEEEEE--CC--EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhc---CCCHH---
Confidence 34556666665554421 145677754332 22 689999999984433333333 333333322 12333
Q ss_pred HHHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCceeEEee-CCceEecCCCCCCCchHHHHHHcCCee
Q 025554 104 SKAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLST-AGVAVQMTTDHEPNTERGSIEDKGGFV 180 (251)
Q Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDsr~~l~r-~g~~~~lt~dh~~~~e~~ri~~~g~~~ 180 (251)
..+..+|+ +..... ....+|+++++++ .+++.++++|..+.|+++ +|++..+..++.+
T Consensus 102 -~il~~ln~-~~~~~~---~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~-------------- 162 (399)
T 3ke6_A 102 -EALEAVDR-FHKQVP---GSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG-------------- 162 (399)
T ss_dssp -HHHHHHHH-HGGGST---TCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC--------------
T ss_pred -HHHHHHHH-HHHhcC---CCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc--------------
Confidence 45556676 333222 2345566666664 678999999999999998 6778877765521
Q ss_pred ecCCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCCH
Q 025554 181 SNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYFF 241 (251)
Q Consensus 181 ~~~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~~ 241 (251)
.+|... ..+...+.+.+ ||.|+|+|||+.|.....
T Consensus 163 ------------------plG~~~-------~~~~~~~~l~~-Gd~l~l~TDGl~e~~~~~ 197 (399)
T 3ke6_A 163 ------------------PLGSGT-------GFPVRSEVLNI-GDAILFYTDGLIERPGRP 197 (399)
T ss_dssp ------------------CTTSSC-------CCCCEEEECCT-TCEEEEECTTTTSCTTCC
T ss_pred ------------------ceECCC-------CceeEEEEECC-CCEEEEECCCcccCCCCC
Confidence 123211 22335577887 999999999999998763
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.17 E-value=4.5e-05 Score=67.37 Aligned_cols=163 Identities=18% Similarity=0.077 Sum_probs=87.1
Q ss_pred CCceEEEEeecCCCCCCCCceEEEEeeecCCCceEEEEEEcCCC-ChHHHH--HHHHHHHHHHHhcccC-CCCHHHHHHH
Q 025554 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHL-GETVPA--YLQKHLFSNILKEEEF-WVDPQRSISK 105 (251)
Q Consensus 30 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~~~~V~DG~G-G~~~a~--~~~~~l~~~~~~~~~~-~~~~~~~l~~ 105 (251)
..+.++...... ....=|.+-+.. . +.+..+++|+|+.| |-.+|- .....++..+...... ..........
T Consensus 175 ~~~~~~~~~~p~--~~vgGD~yd~~~-~--~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 249 (394)
T 3eq2_A 175 EGLEFSHRIIPS--LYLSGDFVDYFR-V--DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSE 249 (394)
T ss_dssp TTEEEEEEEC-------CCCEEECCE-E--TTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHHH
T ss_pred CCeEEEEEeccc--hhcCccEEeEEE-e--CCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHH
Confidence 344555444332 114567664322 1 22357889999887 443332 2233444444433211 0000112445
Q ss_pred HHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCeEEEEEecCce-eEEeeCCceEecCCCCCCCchHHHHHHcCCeeec
Q 025554 106 AYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSR-AVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSN 182 (251)
Q Consensus 106 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~ianvGDsr-~~l~r~g~~~~lt~dh~~~~e~~ri~~~g~~~~~ 182 (251)
.+..+|+.+.... .....|+++++++ .+++.++|.|-.. .++.++|++..+.....
T Consensus 250 ~l~~ln~~l~~~~----~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~----------------- 308 (394)
T 3eq2_A 250 VLAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL----------------- 308 (394)
T ss_dssp HHHHHHHHHHHTT----CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC-------------------
T ss_pred HHHHHHHHHhccC----cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc-----------------
Confidence 5667777776532 2234555555554 6789999999855 67788888887764331
Q ss_pred CCCCCCCcCCcccccccccCcCCCCCceecceEEEEEecCCCeEEEEEcCCCCCCCCC
Q 025554 183 MPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVSYF 240 (251)
Q Consensus 183 ~~~~~~~~~~~~~ltr~lG~~~~k~~v~~~p~v~~~~l~~~~d~lil~SDGl~d~l~~ 240 (251)
.+|... ........+.+.+ ||.|+|.|||+.|..+.
T Consensus 309 ----------------plG~~~-----~~~~~~~~~~l~~-gd~l~l~TDG~~e~~~~ 344 (394)
T 3eq2_A 309 ----------------PVGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPG 344 (394)
T ss_dssp ----------------CCSCCC-----CC--CCEEEECCS-SCEEEECSSCCCC----
T ss_pred ----------------eeEecC-----CCceEEEEEEeCC-CCEEEEECCCcccccCc
Confidence 233222 1233345677887 99999999999997543
No 25
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=27.10 E-value=34 Score=28.02 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=18.8
Q ss_pred EEEEEc-CCCChHHHHHHHHHHHH
Q 025554 65 LFAIYD-GHLGETVPAYLQKHLFS 87 (251)
Q Consensus 65 ~~~V~D-G~GG~~~a~~~~~~l~~ 87 (251)
-.|||| |+||..+++.+.+.++.
T Consensus 9 pIgvfDSGvGGLtv~~~i~~~lp~ 32 (268)
T 3out_A 9 PIGVFDSGIGGLTIVKNLMSILPN 32 (268)
T ss_dssp CEEEEESSSTTHHHHHHHHHHCTT
T ss_pred cEEEEECCCChHHHHHHHHHHCCC
Confidence 478999 99999998888777653
No 26
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=26.46 E-value=47 Score=16.96 Aligned_cols=17 Identities=29% Similarity=0.348 Sum_probs=13.5
Q ss_pred CceeEEeeCCceEecCC
Q 025554 146 DSRAVLSTAGVAVQMTT 162 (251)
Q Consensus 146 Dsr~~l~r~g~~~~lt~ 162 (251)
|-.+|+.++|.+..|+.
T Consensus 9 Dg~~Yvr~dg~WV~l~t 25 (27)
T 2ww6_A 9 DAQAYVRKFGEWVLLST 25 (27)
T ss_dssp SSCEEEEETTEEEEGGG
T ss_pred CcceeEEEcCeEEEccc
Confidence 67788889998887753
Done!